Citrus Sinensis ID: 010340
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 512 | 2.2.26 [Sep-21-2011] | |||||||
| Q944A7 | 512 | Probable serine/threonine | yes | no | 0.992 | 0.992 | 0.812 | 0.0 | |
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.914 | 0.960 | 0.612 | 1e-171 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.908 | 1.0 | 0.508 | 1e-143 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.630 | 0.787 | 0.335 | 6e-40 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.542 | 0.674 | 0.347 | 4e-38 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.615 | 0.760 | 0.319 | 2e-37 | |
| Q8GXZ3 | 410 | Serine/threonine-protein | no | no | 0.525 | 0.656 | 0.336 | 9e-37 | |
| Q9FE20 | 456 | Serine/threonine-protein | no | no | 0.642 | 0.721 | 0.302 | 8e-36 | |
| O49840 | 426 | Protein kinase 2B, chloro | no | no | 0.542 | 0.652 | 0.308 | 2e-35 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.539 | 0.559 | 0.323 | 4e-35 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function desciption |
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Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/516 (81%), Positives = 453/516 (87%), Gaps = 8/516 (1%)
Query: 1 MGCCESTFLKGH-LSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGA---PAFAE 56
MGCC+S F + L D QN+ T NG G G G P+F+E
Sbjct: 1 MGCCQSLFSGDNPLGKDGVQPQPLSQNNHGGATTADNGGSGGASGVGGGGGGGGIPSFSE 60
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ 116
FS ADL+AATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWP+PKQ
Sbjct: 61 FSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQ----NRRWIAVKKFTKMAWPEPKQ 116
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
FA+EAWGVGKLRH RLANLIGYCCDGDERLLVAE+MPNDTLAKHLFHWENQTIEWAMRLR
Sbjct: 117 FAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLR 176
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
V YIAEALDYCS+EGRPLYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYT
Sbjct: 177 VGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296
PPEYLRNGRVTPESV +SFGTVLLDLLSGKHIPPSHALDMIRGKNI+ LMDSHLEG FS+
Sbjct: 237 PPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFST 296
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQH 356
EEATVV +LAS+CLQYEPRERPNTKDLV+TLAPLQ + DVPSYVMLGI + EEAP TPQ
Sbjct: 297 EEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQR 356
Query: 357 PLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFRE 416
PLSP+G+ACSRMDLTAIHQILVMTHY+DDEGTNELSFQEWTQQM+DML+ARKRGD +FRE
Sbjct: 357 PLSPLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRGDQSFRE 416
Query: 417 KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476
K+FKTA+DCYSQFIDVGTMVSPTV+ RRSLC+L+CDQPDAALRDAMQAQCVYPDW TAFY
Sbjct: 417 KDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFY 476
Query: 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
MQ+VALAKL+M+ DAADML EAA LEEKRQR GRGS
Sbjct: 477 MQSVALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 512
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 600 bits (1548), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/482 (61%), Positives = 369/482 (76%), Gaps = 14/482 (2%)
Query: 25 QNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFSSDFIVSESGEKAPN 84
++ R++P EG G S+ P F EFS+ +R AT+ F+++ IVSE GE+APN
Sbjct: 16 ESGRSNPDVTGLDEEGRGE----SNDLPQFREFSIETIRNATSGFAAENIVSEHGERAPN 71
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VVYKG+L+ N+R IAVK+F + +WPD +QF +EA VG+LR+ R+ANL+G C + +E
Sbjct: 72 VVYKGKLE----NQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEE 127
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
RLL+AE+MPN+TLAKHLFHWE+Q ++WAMRLRVAL+IA+AL+YC+S+GR LYHDLNAYRV
Sbjct: 128 RLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRV 187
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS 264
LFD++ +PRLSCFGLMKNSRDGKSYSTNLA+TPPEYLR GRVTPESVI+SFGT+LLDLLS
Sbjct: 188 LFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 247
Query: 265 GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 324
GKHIPPSHALD+IR +NI LMDS LEG FSS++ T + LASRCLQYEPRERPN K LV
Sbjct: 248 GKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLV 307
Query: 325 STLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKD 384
S + PLQ ++ S+ +LG+P LSP+G+AC R DLTAIH+I+ YKD
Sbjct: 308 SAMIPLQKDLEIASHQLLGVPNSATTT-----ALSPLGEACLRSDLTAIHEIIEKLGYKD 362
Query: 385 DEG-TNELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYAR 443
DEG T ELSFQ WT QM+D L +K+GD AFR K+F A++CYSQFI+VGTM SPTV+AR
Sbjct: 363 DEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHAR 422
Query: 444 RSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 503
+SLC+LM D P AL +AMQAQ + P W A Y+QAVAL+ L +A LK+ A LE
Sbjct: 423 QSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAMLES 482
Query: 504 KR 505
KR
Sbjct: 483 KR 484
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/505 (50%), Positives = 349/505 (69%), Gaps = 40/505 (7%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLA 60
MGCC S +VD H + ++P NG G D P +FS +
Sbjct: 1 MGCCYSL----SSTVDPVQDHT-----TDASSEPRNG--------GGED--PPLTKFSFS 41
Query: 61 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADE 120
L+ ATN+FS + IVS+ + +VV+KGRLQ+G ++A+K+F AW DPK F +E
Sbjct: 42 ALKTATNHFSPENIVSD---QTSDVVFKGRLQNGG----FVAIKRFNNMAWSDPKLFLEE 94
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
A VGKLRHKRL NLIGYCCDGD+R LVA++M NDTLAK LF + QT++W++RLRVA +
Sbjct: 95 AQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYF 154
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 240
+AEALDYC++ G Y++L+AY+VLFDE+GD LSCFGLMK + +
Sbjct: 155 VAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEINNDQ------------- 201
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300
+ G V PE+VI+ FGTVL++LLSGK IPPSHA +MI KN+ LMD +L+G FS +EA
Sbjct: 202 ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEAN 261
Query: 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360
VV+ LAS+CL+YE +E PNTK++V+TL LQ R + PSY ++ + E+ + + LSP
Sbjct: 262 VVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSSN-LSP 320
Query: 361 MGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEFK 420
+G+AC RMDL +IH ILV+ Y DD+ ELSF+EW Q+++++ + R+ GD AF E++FK
Sbjct: 321 LGEACLRMDLASIHSILVLAGYDDDKDIIELSFEEWIQEVKELQDVRRNGDRAFVEQDFK 380
Query: 421 TAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480
TA+ CYSQF++ ++V P+VYARRSL +L CD+P+ AL D M AQ V+PDW TAFY+Q+V
Sbjct: 381 TAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAFYLQSV 440
Query: 481 ALAKLDMHKDAADMLKEAASLEEKR 505
ALAKLDM+ D+AD LKEAA LE K+
Sbjct: 441 ALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 180/364 (49%), Gaps = 41/364 (11%)
Query: 1 MGCCESTFLKGHLS-----VDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFA 55
MG C S +K S D K+ + +PS TEG +P
Sbjct: 1 MGICLSAQVKAESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGE------ILQSPNLK 54
Query: 56 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN------DNRRWIAVKKFTKH 109
FS A+L++AT NF D ++ E G V+KG + + + IAVKK +
Sbjct: 55 SFSFAELKSATRNFRPDSVLGEGGF---GCVFKGWIDEKSLTASRPGTGLVIAVKKLNQD 111
Query: 110 AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH--WENQ 167
W +++ E +G+ H+ L LIGYC + + RLLV E+MP +L HLF Q
Sbjct: 112 GWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQ 171
Query: 168 TIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226
+ W +RL+VAL A+ L + SSE R +Y D +L D + +LS FGL K+ G
Sbjct: 172 PLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIG 231
Query: 227 -KSY-STNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP----PSHALDM 276
KS+ ST + Y PEYL G +T +S ++SFG VLL+LLSG+ PS ++
Sbjct: 232 DKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNL 291
Query: 277 IR--------GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328
+ + I ++D+ L+ +S EEA V L+ RCL E + RPN ++VS L
Sbjct: 292 VEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLE 351
Query: 329 PLQN 332
+Q+
Sbjct: 352 HIQS 355
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 163/308 (52%), Gaps = 30/308 (9%)
Query: 51 APAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN------DNRRWIAVK 104
+P F+ A+L+AAT NF D ++ E G + V+KG + + IAVK
Sbjct: 51 SPNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVK 107
Query: 105 KFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW 164
K + W +++ E +G+ H L LIGYC + + RLLV E+MP +L HLF
Sbjct: 108 KLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRR 167
Query: 165 EN--QTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221
+ Q + W +RL+VAL A+ L + ++E +Y D +L D + +LS FGL K
Sbjct: 168 GSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAK 227
Query: 222 NSRDG-KSY-STNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-----KHIPP 270
+ G KS+ ST + Y PEYL G +T +S ++S+G VLL++LSG K+ PP
Sbjct: 228 DGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPP 287
Query: 271 SH------ALDMIRGK-NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
A ++ K + ++D+ L+ +S EEA V LA RCL +E + RPN ++
Sbjct: 288 GEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEV 347
Query: 324 VSTLAPLQ 331
VS L +Q
Sbjct: 348 VSHLEHIQ 355
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 166/360 (46%), Gaps = 45/360 (12%)
Query: 24 QQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFA--EFSLADLRAATNNFSSDFIVSESGEK 81
+ N++ HP P E + + A FS +L AT NF + ++ E G
Sbjct: 32 RDNNKTHPENPKTVNEQNKNNDEDKEVTNNIAAQTFSFRELATATKNFRQECLIGEGGFG 91
Query: 82 APNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD 141
VYKG+L+ +AVK+ ++ K+F E + L HK L NLIGYC D
Sbjct: 92 R---VYKGKLEKTG---MIVAVKQLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCAD 145
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEGRP--LYH 197
GD+RLLV EYM +L HL I +W R+R+AL A L+Y + P +Y
Sbjct: 146 GDQRLLVYEYMSRGSLEDHLLDLTPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYR 205
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESV 251
DL A +L D + +LS FGL K G + Y PEY R G++T +S
Sbjct: 206 DLKAANILLDGEFNAKLSDFGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSD 265
Query: 252 IFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM-----------------DSHLEGNF 294
++SFG VLL+L++G+ + +D R K+ +L+ D LEG F
Sbjct: 266 VYSFGVVLLELITGRRV-----IDTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVF 320
Query: 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTP 354
+ +A+ CLQ E RP D+V+ L L PD + +P H + PP P
Sbjct: 321 PEKALNQAVAVAAMCLQEEATVRPLMSDVVTALGFLGTAPDGS----ISVP-HYDDPPQP 375
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 31/300 (10%)
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRW------IAVKKFTKHA 110
F+L +L T +F D+I+ E G VYKG + +DN R +AVK K
Sbjct: 57 FTLFELETITKSFRPDYILGEGGF---GTVYKGYI---DDNLRVGLKSLPVAVKVLNKEG 110
Query: 111 WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE 170
+++ E +G+LRH L LIGYCC+ D RLLV E+M +L HLF +
Sbjct: 111 LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMLRGSLENHLFRKTTAPLS 170
Query: 171 WAMRLRVALYIAEALDYCSSEGRP-LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS- 228
W+ R+ +AL A+ L + + RP +Y D +L D + +LS FGL K G
Sbjct: 171 WSRRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 230
Query: 229 -YSTNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK----HIPPSHALDMI-- 277
ST + Y PEY+ G +T S ++SFG VLL++L+G+ PS +++
Sbjct: 231 HVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRKSVDKTRPSKEQNLVDW 290
Query: 278 ------RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331
+ +L ++D LE +S A LA CL P+ RP D+V TL PLQ
Sbjct: 291 ARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ 350
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 175/380 (46%), Gaps = 51/380 (13%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQ-------PSNGTEGSGGLAAGSD---- 49
MGC ++ + +H Q ++ PT PS G + S GS
Sbjct: 1 MGCFSCFDSSDDEKLNPVDESNHGQKKQSQPTVSNNISGLPSGGEKLSSKTNGGSKRELL 60
Query: 50 ------GAPAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAV 103
G A F+ +L AAT NF D + E G VYKGRL + + +AV
Sbjct: 61 LPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGF---GRVYKGRL---DSTGQVVAV 114
Query: 104 KKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH 163
K+ ++ ++F E + L H L NLIGYC DGD+RLLV E+MP +L HL
Sbjct: 115 KQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHD 174
Query: 164 W--ENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGL 219
+ + ++W MR+++A A+ L++ + P +Y D + +L DE P+LS FGL
Sbjct: 175 LPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGL 234
Query: 220 MKNSRDG-KSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHA 273
K G KS+ + Y PEY G++T +S ++SFG V L+L++G+ S
Sbjct: 235 AKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDS-- 292
Query: 274 LDMIRG---------------KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318
+M G + + L D L+G F + +AS C+Q + RP
Sbjct: 293 -EMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRP 351
Query: 319 NTKDLVSTLAPLQNRPDVPS 338
D+V+ L+ L N+ PS
Sbjct: 352 LIADVVTALSYLANQAYDPS 371
|
Protein kinase required for plant defense mechanism mediated by the disease resistance (R) protein RPS5. In case of infection by Pseudomonas syringae, RPS5 specifically recognizes the avrPphB type III effector avirulence protein and triggers a defense reaction. AvrPphB may trigger RPS5-mediated defense mechanism via the cleavage of PBS1. Both kinase activity and cleavage by avrPphB are independently required to trigger the RPS5-mediated resistance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 30/308 (9%)
Query: 51 APAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN-------DNRRWIAV 103
+P F+ +L+ AT NF D ++ E G V+KG + DG + +AV
Sbjct: 65 SPNLKAFTFNELKNATRNFRPDSLLGEGGF---GYVFKGWI-DGTTLTASKPGSGIVVAV 120
Query: 104 KKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH 163
KK + K++ E +G+L H L L+GYC +G+ RLLV E+MP +L HLF
Sbjct: 121 KKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFR 180
Query: 164 WENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222
Q + WA+R++VA+ A+ L + ++ + +Y D A +L D + +LS FGL K
Sbjct: 181 RGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKA 240
Query: 223 SRDGKS--YSTNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM 276
G ST + Y PEY+ GR+T +S ++SFG VLL+LLSG+ + M
Sbjct: 241 GPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGM 300
Query: 277 IRG------------KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 324
+ + + +MD+ L G + + A LA +CL + + RP +++
Sbjct: 301 EQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVL 360
Query: 325 STLAPLQN 332
+ L L++
Sbjct: 361 AKLDQLES 368
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 36/312 (11%)
Query: 56 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGND------NRRWIAVKKFTKH 109
+F+ DL+ +T NF + ++ E G V+KG +++ +AVK
Sbjct: 129 KFTFNDLKLSTRNFRPESLLGEGGF---GCVFKGWIEENGTAPVKPGTGLTVAVKTLNPD 185
Query: 110 AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTI 169
K++ E +G L H L L+GYC + D+RLLV E+MP +L HLF + +
Sbjct: 186 GLQGHKEWLAEINFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPL 244
Query: 170 EWAMRLRVALYIAEALDYCSSEG-RP-LYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-G 226
W++R+++AL A+ L + E +P +Y D +L D + + +LS FGL K++ D G
Sbjct: 245 PWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEG 304
Query: 227 KSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-----KHIPPS----- 271
K++ + Y PEY+ G +T +S ++SFG VLL++L+G K+ P
Sbjct: 305 KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 364
Query: 272 -----HALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326
H LD R L+D LEG+FS + A V LA++CL +P+ RP D+V
Sbjct: 365 EWARPHLLDKRR---FYRLLDPRLEGHFSIKGAQKVTQLAAQCLSRDPKIRPKMSDVVEA 421
Query: 327 LAPLQNRPDVPS 338
L PL + D+ S
Sbjct: 422 LKPLPHLKDMAS 433
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 512 | ||||||
| 255539170 | 513 | receptor protein kinase, putative [Ricin | 0.990 | 0.988 | 0.864 | 0.0 | |
| 147797812 | 508 | hypothetical protein VITISV_000979 [Viti | 0.984 | 0.992 | 0.866 | 0.0 | |
| 225459846 | 508 | PREDICTED: probable serine/threonine-pro | 0.984 | 0.992 | 0.864 | 0.0 | |
| 224061905 | 520 | predicted protein [Populus trichocarpa] | 0.994 | 0.978 | 0.863 | 0.0 | |
| 449452959 | 509 | PREDICTED: probable serine/threonine-pro | 0.988 | 0.994 | 0.844 | 0.0 | |
| 297744528 | 500 | unnamed protein product [Vitis vinifera] | 0.974 | 0.998 | 0.828 | 0.0 | |
| 224080762 | 499 | predicted protein [Populus trichocarpa] | 0.974 | 1.0 | 0.830 | 0.0 | |
| 224086008 | 469 | predicted protein [Populus trichocarpa] | 0.898 | 0.980 | 0.926 | 0.0 | |
| 359474808 | 514 | PREDICTED: probable serine/threonine-pro | 0.960 | 0.957 | 0.830 | 0.0 | |
| 224103071 | 498 | predicted protein [Populus trichocarpa] | 0.972 | 1.0 | 0.832 | 0.0 |
| >gi|255539170|ref|XP_002510650.1| receptor protein kinase, putative [Ricinus communis] gi|223551351|gb|EEF52837.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/518 (86%), Positives = 473/518 (91%), Gaps = 11/518 (2%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHH----QQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAE 56
MGCC S+ + + K +H+ Q +NH QP NG + A S G F
Sbjct: 1 MGCCHSSLFQVPFISEKKEPNHNYSKNQNQDQNH--QPPNGKGAACPPAGTSSG---FTI 55
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQ--DGNDNRRWIAVKKFTKHAWPDP 114
FS ADL+AATNNFSS+FIVSESGEKAPNVVYKGRLQ D N+NR WIAVKKFTK AWPDP
Sbjct: 56 FSFADLKAATNNFSSEFIVSESGEKAPNVVYKGRLQKQDNNNNRTWIAVKKFTKLAWPDP 115
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR 174
KQFADEA GVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR
Sbjct: 116 KQFADEALGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR 175
Query: 175 LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234
LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA
Sbjct: 176 LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 235
Query: 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF 294
YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL LMDSHLEGNF
Sbjct: 236 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILLLMDSHLEGNF 295
Query: 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTP 354
S++EATVVFDLAS+CLQYEPRERPNTKDLV+T+APLQN+PDVPSYVMLGIP+HEEAPPTP
Sbjct: 296 STDEATVVFDLASQCLQYEPRERPNTKDLVATVAPLQNKPDVPSYVMLGIPKHEEAPPTP 355
Query: 355 QHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAF 414
QHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAF
Sbjct: 356 QHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAF 415
Query: 415 REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTA 474
R+K+FKTA+DCYSQFIDVGTM+SPTVYARRSLCHL+CDQPDAALRDAMQAQCVYP+WSTA
Sbjct: 416 RDKDFKTAIDCYSQFIDVGTMISPTVYARRSLCHLLCDQPDAALRDAMQAQCVYPEWSTA 475
Query: 475 FYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
FYMQAVALAKLDMHKDAADML EAA+LEEKRQR G+GS
Sbjct: 476 FYMQAVALAKLDMHKDAADMLNEAAALEEKRQRGGKGS 513
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147797812|emb|CAN74078.1| hypothetical protein VITISV_000979 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/516 (86%), Positives = 474/516 (91%), Gaps = 12/516 (2%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGA----PAFAE 56
MGCC+S+ K S K+R+ Q NH T PSNGT+ + G PAF+E
Sbjct: 1 MGCCQSSLFKRTRS--EKDRYP-QTTGLNH-TPPSNGTDAAAAGVGDGGGGAGGVPAFSE 56
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ 116
FSLADL+AATNNFSSDFIVSESGEKAPNVVYKGRLQ NRRWIAVKKFTK AWPDPKQ
Sbjct: 57 FSLADLKAATNNFSSDFIVSESGEKAPNVVYKGRLQ----NRRWIAVKKFTKLAWPDPKQ 112
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
FADEAWGVGKLRH+RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR
Sbjct: 113 FADEAWGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 172
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
VALYIAEALDYCS+EGRPLYHDLNAYRVLFDENGDPRLSCFG+MKNSRDGKSYSTNLAYT
Sbjct: 173 VALYIAEALDYCSAEGRPLYHDLNAYRVLFDENGDPRLSCFGMMKNSRDGKSYSTNLAYT 232
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296
PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI LMDSHLEGNFS+
Sbjct: 233 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIPLLMDSHLEGNFST 292
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQH 356
EEATVVF+LAS+CLQYEPRERP+ ++LV TLAPLQN+PDVPSYVMLGIP+HEEAPPTPQH
Sbjct: 293 EEATVVFELASQCLQYEPRERPSPRNLVETLAPLQNKPDVPSYVMLGIPKHEEAPPTPQH 352
Query: 357 PLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFRE 416
PLSPMGDAC+RMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGD+AFR+
Sbjct: 353 PLSPMGDACTRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRD 412
Query: 417 KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476
K+FKTA+DCYSQFIDVGTMVSPTVYARRSLC+L+CDQPD ALRDAMQAQCVYPDWSTAFY
Sbjct: 413 KDFKTAIDCYSQFIDVGTMVSPTVYARRSLCYLLCDQPDTALRDAMQAQCVYPDWSTAFY 472
Query: 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
MQAVALAKLDMHKDAADML EAA+LEEKRQR GRGS
Sbjct: 473 MQAVALAKLDMHKDAADMLNEAAALEEKRQRGGRGS 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225459846|ref|XP_002285926.1| PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform 1 [Vitis vinifera] gi|302141672|emb|CBI18875.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/516 (86%), Positives = 473/516 (91%), Gaps = 12/516 (2%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGA----PAFAE 56
MGCC+S+ K S K+R+ Q NH T PSNGT+ + PAF+E
Sbjct: 1 MGCCQSSLFKRTRS--DKDRYP-QTTGLNH-TPPSNGTDAAAAGVGDGGEGAGGVPAFSE 56
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ 116
FSLADL+AATNNFSSDFIVSESGEKAPNVVYKGRLQ NRRWIAVKKFTK AWPDPKQ
Sbjct: 57 FSLADLKAATNNFSSDFIVSESGEKAPNVVYKGRLQ----NRRWIAVKKFTKLAWPDPKQ 112
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
FADEAWGVGKLRH+RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR
Sbjct: 113 FADEAWGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 172
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
VALYIAEALDYCS+EGRPLYHDLNAYRVLFDENGDPRLSCFG+MKNSRDGKSYSTNLAYT
Sbjct: 173 VALYIAEALDYCSAEGRPLYHDLNAYRVLFDENGDPRLSCFGMMKNSRDGKSYSTNLAYT 232
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296
PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI LMDSHLEGNFS+
Sbjct: 233 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIPLLMDSHLEGNFST 292
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQH 356
EEATVVF+LAS+CLQYEPRERP+ ++LV TLAPLQN+PDVPSYVMLGIP+HEEAPPTPQH
Sbjct: 293 EEATVVFELASQCLQYEPRERPSPRNLVETLAPLQNKPDVPSYVMLGIPKHEEAPPTPQH 352
Query: 357 PLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFRE 416
PLSPMGDAC+RMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGD+AFR+
Sbjct: 353 PLSPMGDACTRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRD 412
Query: 417 KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476
K+FKTA+DCYSQFIDVGTMVSPTVYARRSLC+L+CDQPD ALRDAMQAQCVYPDWSTAFY
Sbjct: 413 KDFKTAIDCYSQFIDVGTMVSPTVYARRSLCYLLCDQPDTALRDAMQAQCVYPDWSTAFY 472
Query: 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
MQAVALAKLDMHKDAADML EAA+LEEKRQR GRGS
Sbjct: 473 MQAVALAKLDMHKDAADMLNEAAALEEKRQRGGRGS 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224061905|ref|XP_002300657.1| predicted protein [Populus trichocarpa] gi|222842383|gb|EEE79930.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/521 (86%), Positives = 478/521 (91%), Gaps = 12/521 (2%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHR--------NHPTQPSNGTEGSGGLAAGSDGAP 52
MGCC+S+ K +S D+KN QQN + NH ++P+NGTE SGGL G G
Sbjct: 1 MGCCQSSLFKAPISDDSKNNQQQQQNQQQQPQHVRINHASRPTNGTETSGGLGGGC-GVL 59
Query: 53 AFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQ--DGNDNRRWIAVKKFTKHA 110
+F EFSLADL+AATNNFS +FIVSESGEKAPNVVYKGRLQ D N+NR WIAVKKFTK A
Sbjct: 60 SFTEFSLADLKAATNNFSPEFIVSESGEKAPNVVYKGRLQNHDNNNNRSWIAVKKFTKLA 119
Query: 111 WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE 170
WPDPKQFADEA GVGKLRHKRLANLIG+CC GDERLLVAEY+PNDTLAKHLFHWENQTIE
Sbjct: 120 WPDPKQFADEALGVGKLRHKRLANLIGFCCVGDERLLVAEYLPNDTLAKHLFHWENQTIE 179
Query: 171 WAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS 230
WAMRLRVALYI+EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS DGKSYS
Sbjct: 180 WAMRLRVALYISEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSSDGKSYS 239
Query: 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL 290
TNLAYTPPEYL+NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI LMDSHL
Sbjct: 240 TNLAYTPPEYLQNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIRLLMDSHL 299
Query: 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEE- 349
EGNFS+EEATVVFDLAS+CLQYEPRERPNTKDLV+TLAPLQN+PDVPSYVMLGI +HEE
Sbjct: 300 EGNFSTEEATVVFDLASQCLQYEPRERPNTKDLVTTLAPLQNKPDVPSYVMLGISKHEET 359
Query: 350 APPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKR 409
APPTPQHPLSPMGDAC+RMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKR
Sbjct: 360 APPTPQHPLSPMGDACTRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKR 419
Query: 410 GDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYP 469
GDVAFR+K+FKTAV+CYSQFIDVGTMVSPTVYARRSLCHL+ DQPDAALRDAMQAQCVYP
Sbjct: 420 GDVAFRDKDFKTAVECYSQFIDVGTMVSPTVYARRSLCHLLSDQPDAALRDAMQAQCVYP 479
Query: 470 DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510
DWSTAFYMQAVALAKLDMHKDAADML EAA+LEEK+QR GR
Sbjct: 480 DWSTAFYMQAVALAKLDMHKDAADMLNEAAALEEKKQRGGR 520
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452959|ref|XP_004144226.1| PREDICTED: probable serine/threonine-protein kinase At4g35230-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/515 (84%), Positives = 466/515 (90%), Gaps = 9/515 (1%)
Query: 1 MGCCESTFLKGH---LSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEF 57
MGCC S+ + H L N H QN N + PSNG+ L S G PAF+EF
Sbjct: 1 MGCCGSSLQRAHSLGLGAGKSNHIPHPQN--NFQSHPSNGSSDPAAL---SGGVPAFSEF 55
Query: 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQF 117
S ADL+AATNNFSSD+IVSESG+KAPNVV+KGRLQ+ N NRRWIAVKKF K AWPDPKQF
Sbjct: 56 SFADLKAATNNFSSDYIVSESGDKAPNVVFKGRLQNQN-NRRWIAVKKFAKFAWPDPKQF 114
Query: 118 ADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRV 177
+EA GVGKLRHKRLANLIGYCC+G+ER L+AEYMPNDTLAKHLFHWENQTIEWAMRLRV
Sbjct: 115 VEEASGVGKLRHKRLANLIGYCCEGEERFLIAEYMPNDTLAKHLFHWENQTIEWAMRLRV 174
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP 237
ALYIAEALDYCSS+ RPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP
Sbjct: 175 ALYIAEALDYCSSQERPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP 234
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297
PEYLRNGRVT ESVIFSFGTVLLDLLSGKHIPP HALDMIRGKNIL LMDSHLEGNFS+
Sbjct: 235 PEYLRNGRVTAESVIFSFGTVLLDLLSGKHIPPGHALDMIRGKNILLLMDSHLEGNFSTG 294
Query: 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHP 357
EATVVFDLASRCLQYEPR+RPNTKDLV+TLAPLQN+PDV SYVMLGIP+HEEAPPTPQHP
Sbjct: 295 EATVVFDLASRCLQYEPRDRPNTKDLVATLAPLQNKPDVASYVMLGIPKHEEAPPTPQHP 354
Query: 358 LSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREK 417
L+PMGDAC+RMDLTAIHQILVMTHYKDDE TNELSFQEWTQQMRDMLEARKRGD+AFR+K
Sbjct: 355 LTPMGDACARMDLTAIHQILVMTHYKDDERTNELSFQEWTQQMRDMLEARKRGDLAFRDK 414
Query: 418 EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 477
+FKTA+DCYSQFIDVGTMVSPTVYARRSLC+L+CDQPDAALRDAMQAQCVYPDWST+FYM
Sbjct: 415 DFKTAIDCYSQFIDVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQAQCVYPDWSTSFYM 474
Query: 478 QAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
QAVALAKLDM KDAADML EAA+LEEKRQ+ GRGS
Sbjct: 475 QAVALAKLDMDKDAADMLNEAAALEEKRQKGGRGS 509
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744528|emb|CBI37790.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/513 (82%), Positives = 467/513 (91%), Gaps = 14/513 (2%)
Query: 1 MGCCESTFL-KGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSL 59
MGCCES+FL + H D ++ H++ N +N P P + +G G P+F+EFS
Sbjct: 1 MGCCESSFLTETHPEKDDQHHHNNSHNTQNPPFSPPSPADG---------GVPSFSEFSF 51
Query: 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD 119
+DL+AATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWPDPKQFA+
Sbjct: 52 SDLKAATNNFSSDSIVSESGEKAPNIVYKGRLQ----NRRWIAVKKFTKMAWPDPKQFAE 107
Query: 120 EAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL 179
EAWGVG+LRH+RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL
Sbjct: 108 EAWGVGRLRHQRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL 167
Query: 180 YIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 239
+IAEALD+CS+E R LYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPE
Sbjct: 168 FIAEALDFCSTESRSLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 227
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299
YLRNGRVTPESVI+SFGTVLLDLLSGKHIPPSHALD+IR KNI+ LMDSHLEGNFS+EEA
Sbjct: 228 YLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDLIRDKNIILLMDSHLEGNFSTEEA 287
Query: 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLS 359
T V LAS+CLQYEPRERPNTKDLV+TLAPL+ +PDVPSYVMLGIP+HE+APPTPQHPLS
Sbjct: 288 TTVVGLASQCLQYEPRERPNTKDLVATLAPLKTKPDVPSYVMLGIPKHEDAPPTPQHPLS 347
Query: 360 PMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEF 419
PMG+ACSR+DLTAIHQILVMTHY+DDEGTNELSFQEWTQQMRDMLEARKRGD AFR+K+F
Sbjct: 348 PMGEACSRLDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDFAFRDKDF 407
Query: 420 KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479
KTA+DCYSQF+DVGTMVSPTVYARRSLC+L+CDQPDAALRDAMQAQCVYPDW TAFYMQ+
Sbjct: 408 KTAIDCYSQFVDVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQS 467
Query: 480 VALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
VALAKLDMHKDAADML EAA LEEKRQ+ GRGS
Sbjct: 468 VALAKLDMHKDAADMLNEAAGLEEKRQKGGRGS 500
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224080762|ref|XP_002306223.1| predicted protein [Populus trichocarpa] gi|222849187|gb|EEE86734.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/512 (83%), Positives = 459/512 (89%), Gaps = 13/512 (2%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLA 60
MGCC S+FL H + + + H QP GS L + G P+F EFS +
Sbjct: 1 MGCCSSSFLS--------ETHPEKDHKKTHQQQPPRNPSGSAVLDPAT-GVPSFCEFSFS 51
Query: 61 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADE 120
DL+ ATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWPDPKQFA+E
Sbjct: 52 DLKTATNNFSSDNIVSESGEKAPNLVYKGRLQ----NRRWIAVKKFTKMAWPDPKQFAEE 107
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
AWGVGKLRHK+LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY
Sbjct: 108 AWGVGKLRHKKLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 167
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 240
IAEALDYCSSEGRPLYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY
Sbjct: 168 IAEALDYCSSEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 227
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300
LRNGRVTPESVI+SFGTVLLDLLSGKHIPPS A+DMIRGKNI+ LMDSHLEGNFS+EEAT
Sbjct: 228 LRNGRVTPESVIYSFGTVLLDLLSGKHIPPSRAIDMIRGKNIILLMDSHLEGNFSTEEAT 287
Query: 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360
+V LAS+CLQYEPRERP+TKDLV+TLAPLQ +PDVPSYVMLGI +HEEAP TPQ PLSP
Sbjct: 288 LVVGLASQCLQYEPRERPSTKDLVTTLAPLQTKPDVPSYVMLGISKHEEAPATPQRPLSP 347
Query: 361 MGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEFK 420
MG+ACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE+RKRGD AFR+K+FK
Sbjct: 348 MGEACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLESRKRGDFAFRDKDFK 407
Query: 421 TAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480
TA+DCYSQFIDVGTMVSPTV+ARRSLC+L+CDQPDAALRDAMQAQCVYPDW TAFYMQ+V
Sbjct: 408 TAIDCYSQFIDVGTMVSPTVFARRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSV 467
Query: 481 ALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
ALAKLDMH DAADML EAA+LEEK+QR G+GS
Sbjct: 468 ALAKLDMHNDAADMLNEAAALEEKKQRGGKGS 499
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224086008|ref|XP_002307775.1| predicted protein [Populus trichocarpa] gi|222857224|gb|EEE94771.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/462 (92%), Positives = 445/462 (96%), Gaps = 2/462 (0%)
Query: 51 APAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRR--WIAVKKFTK 108
P+F EFS ADL+AATNNFS +FIVSESGEKA NVVYKGRLQ+ N++ WIAVKKFTK
Sbjct: 8 VPSFTEFSFADLKAATNNFSPEFIVSESGEKASNVVYKGRLQNQNNSNNRSWIAVKKFTK 67
Query: 109 HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT 168
AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTL+KHLFHWENQT
Sbjct: 68 LAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLSKHLFHWENQT 127
Query: 169 IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228
IEWAMRLRVALYI EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS DGKS
Sbjct: 128 IEWAMRLRVALYITEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSMDGKS 187
Query: 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288
YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL LMDS
Sbjct: 188 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILLLMDS 247
Query: 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHE 348
HLEGNFS+EEATVVFDLASRCLQYEP ERPNTKDLV+TLAPLQN+PDV SYVMLGIP+HE
Sbjct: 248 HLEGNFSTEEATVVFDLASRCLQYEPGERPNTKDLVTTLAPLQNKPDVLSYVMLGIPKHE 307
Query: 349 EAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARK 408
EAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARK
Sbjct: 308 EAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARK 367
Query: 409 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 468
RGDVAFR+K+FKTAV+CYSQFIDVGTMVSPTVYARRSLCHL+CDQPDAALRDAMQAQCVY
Sbjct: 368 RGDVAFRDKDFKTAVECYSQFIDVGTMVSPTVYARRSLCHLLCDQPDAALRDAMQAQCVY 427
Query: 469 PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510
PDWSTAFYMQAVALAKLDMHKDAADML EAA+LEEK+QRSGR
Sbjct: 428 PDWSTAFYMQAVALAKLDMHKDAADMLNEAATLEEKKQRSGR 469
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359474808|ref|XP_002281613.2| PREDICTED: probable serine/threonine-protein kinase At4g35230 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/506 (83%), Positives = 461/506 (91%), Gaps = 14/506 (2%)
Query: 1 MGCCESTFL-KGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSL 59
MGCCES+FL + H D ++ H++ N +N P P + +G G P+F+EFS
Sbjct: 1 MGCCESSFLTETHPEKDDQHHHNNSHNTQNPPFSPPSPADG---------GVPSFSEFSF 51
Query: 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD 119
+DL+AATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWPDPKQFA+
Sbjct: 52 SDLKAATNNFSSDSIVSESGEKAPNIVYKGRLQ----NRRWIAVKKFTKMAWPDPKQFAE 107
Query: 120 EAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL 179
EAWGVG+LRH+RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL
Sbjct: 108 EAWGVGRLRHQRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL 167
Query: 180 YIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 239
+IAEALD+CS+E R LYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPE
Sbjct: 168 FIAEALDFCSTESRSLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 227
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299
YLRNGRVTPESVI+SFGTVLLDLLSGKHIPPSHALD+IR KNI+ LMDSHLEGNFS+EEA
Sbjct: 228 YLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDLIRDKNIILLMDSHLEGNFSTEEA 287
Query: 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLS 359
T V LAS+CLQYEPRERPNTKDLV+TLAPL+ +PDVPSYVMLGIP+HE+APPTPQHPLS
Sbjct: 288 TTVVGLASQCLQYEPRERPNTKDLVATLAPLKTKPDVPSYVMLGIPKHEDAPPTPQHPLS 347
Query: 360 PMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEF 419
PMG+ACSR+DLTAIHQILVMTHY+DDEGTNELSFQEWTQQMRDMLEARKRGD AFR+K+F
Sbjct: 348 PMGEACSRLDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDFAFRDKDF 407
Query: 420 KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479
KTA+DCYSQF+DVGTMVSPTVYARRSLC+L+CDQPDAALRDAMQAQCVYPDW TAFYMQ+
Sbjct: 408 KTAIDCYSQFVDVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQS 467
Query: 480 VALAKLDMHKDAADMLKEAASLEEKR 505
VALAKLDMHKDAADML EAA LEEKR
Sbjct: 468 VALAKLDMHKDAADMLNEAAGLEEKR 493
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103071|ref|XP_002312914.1| predicted protein [Populus trichocarpa] gi|222849322|gb|EEE86869.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/512 (83%), Positives = 457/512 (89%), Gaps = 14/512 (2%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLA 60
MGCC S+ L +T H++ H+ HP PS GS L + G P+F EFS
Sbjct: 1 MGCCCSSIL-----AETHPEKDHKKTHQQHPLNPS----GSIVLDPAT-GIPSFCEFSFP 50
Query: 61 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADE 120
DL+ ATNNFS D IVSESGEKAPN+VYKGRLQ NRR IAVKKFTK AWPDPKQFA+E
Sbjct: 51 DLKTATNNFSPDNIVSESGEKAPNLVYKGRLQ----NRRSIAVKKFTKMAWPDPKQFAEE 106
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
AWGVGK RHK+LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY
Sbjct: 107 AWGVGKFRHKKLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 166
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 240
IAEALDYCSSEGRPLYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY
Sbjct: 167 IAEALDYCSSEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 226
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300
LRNGRVTPESVI+SFGTVLLDLLSGKHIPPSHA+DMIRGKNI LMDSHLEGNFS+EEAT
Sbjct: 227 LRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHAIDMIRGKNITLLMDSHLEGNFSTEEAT 286
Query: 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360
VV LAS+CLQYEPRERP+TKDLV+TLAPLQ +PDVPSYVMLGI +HEEAP TPQ PLSP
Sbjct: 287 VVVGLASQCLQYEPRERPSTKDLVTTLAPLQTKPDVPSYVMLGISKHEEAPATPQRPLSP 346
Query: 361 MGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEFK 420
MG+ACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE+RKRGD AFR+K+FK
Sbjct: 347 MGEACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLESRKRGDFAFRDKDFK 406
Query: 421 TAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480
TA+DCYSQFIDVGTMVSPTV+ARRSLC L+CDQPDAALRDAMQAQCVYPDW TAFYMQ+V
Sbjct: 407 TAIDCYSQFIDVGTMVSPTVFARRSLCFLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSV 466
Query: 481 ALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
ALAKLDMH DAADML EAA+LEEK+QR G+GS
Sbjct: 467 ALAKLDMHNDAADMLNEAAALEEKKQRGGKGS 498
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 512 | ||||||
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.992 | 0.992 | 0.800 | 7.4e-224 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.878 | 0.920 | 0.673 | 2.9e-167 | |
| TAIR|locus:2036426 | 507 | BSK11 "brassinosteroid-signali | 0.980 | 0.990 | 0.598 | 2.4e-163 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.875 | 0.914 | 0.668 | 9.6e-160 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.869 | 0.913 | 0.654 | 3.7e-158 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.878 | 0.920 | 0.624 | 3.5e-155 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.865 | 0.909 | 0.640 | 6.5e-154 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.861 | 0.901 | 0.632 | 4.5e-153 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.857 | 0.908 | 0.573 | 4.2e-134 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.869 | 0.932 | 0.557 | 1e-130 |
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2161 (765.8 bits), Expect = 7.4e-224, P = 7.4e-224
Identities = 413/516 (80%), Positives = 445/516 (86%)
Query: 1 MGCCESTFLKGH-LSVDTKXXXXXXXXXXXXPTQPSNGTEXXXXXXXXXXXXX---XFAE 56
MGCC+S F + L D T NG F+E
Sbjct: 1 MGCCQSLFSGDNPLGKDGVQPQPLSQNNHGGATTADNGGSGGASGVGGGGGGGGIPSFSE 60
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ 116
FS ADL+AATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWP+PKQ
Sbjct: 61 FSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQ----NRRWIAVKKFTKMAWPEPKQ 116
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
FA+EAWGVGKLRH RLANLIGYCCDGDERLLVAE+MPNDTLAKHLFHWENQTIEWAMRLR
Sbjct: 117 FAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLR 176
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
V YIAEALDYCS+EGRPLYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYT
Sbjct: 177 VGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296
PPEYLRNGRVTPESV +SFGTVLLDLLSGKHIPPSHALDMIRGKNI+ LMDSHLEG FS+
Sbjct: 237 PPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFST 296
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQH 356
EEATVV +LAS+CLQYEPRERPNTKDLV+TLAPLQ + DVPSYVMLGI + EEAP TPQ
Sbjct: 297 EEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQR 356
Query: 357 PLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFRE 416
PLSP+G+ACSRMDLTAIHQILVMTHY+DDEGTNELSFQEWTQQM+DML+ARKRGD +FRE
Sbjct: 357 PLSPLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRGDQSFRE 416
Query: 417 KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476
K+FKTA+DCYSQFIDVGTMVSPTV+ RRSLC+L+CDQPDAALRDAMQAQCVYPDW TAFY
Sbjct: 417 KDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFY 476
Query: 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 512
MQ+VALAKL+M+ DAADML EAA LEEKRQR GRGS
Sbjct: 477 MQSVALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 512
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
Identities = 307/456 (67%), Positives = 373/456 (81%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EFS LRAAT FS+D IVSE G KAPNVVYKGRL+D RWIAVK+F + AWPD
Sbjct: 37 FTEFSFDQLRAATCGFSTDSIVSEHGVKAPNVVYKGRLEDD----RWIAVKRFNRSAWPD 92
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF +EA VG+LR++RLANLIG+CC+GDERLLVAE+MP +TL+KHLFHW++Q ++W+M
Sbjct: 93 TRQFLEEAKAVGQLRNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSM 152
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVALY+A+AL+YCSS+GR LYHDLNAYR+LFD++G+PRLSCFGLMKNSRDGKSYSTNL
Sbjct: 153 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 212
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
A+TPPEYLR GRV PESV++SFGT+LLDLLSGKHIPPSHALD+IRGKN L LMDS L+G+
Sbjct: 213 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGH 272
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPT 353
FS+++ T + LASRCLQYE RERPN K LVS+LAPLQ D+PS+V++GIP H A P
Sbjct: 273 FSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPSHVLMGIP-HGAASPK 331
Query: 354 PQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGT-NELSFQEWTQQMRDMLEARKRGDV 412
L+P+GDACSR DLTAIH+IL YKDDEG NELSFQ WT Q+++ L ++K+GD
Sbjct: 332 ETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDA 391
Query: 413 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472
AF+ K+F TAV+CY+QFI+ GTMVSPTV+ARR LC+LM + P AL DAMQAQ V P+W
Sbjct: 392 AFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWP 451
Query: 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 508
TAFY+QA AL L M KDA + LK+ SLE K+ +
Sbjct: 452 TAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHNN 487
|
|
| TAIR|locus:2036426 BSK11 "brassinosteroid-signaling kinase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1590 (564.8 bits), Expect = 2.4e-163, P = 2.4e-163
Identities = 304/508 (59%), Positives = 374/508 (73%)
Query: 1 MGCCESTFLKGHLSVDTKXXXXXXXXXXXXPTQPSNGTEXXXXXXXXXXXXXX---FAEF 57
MGCC+S+FLK D K + N F+EF
Sbjct: 1 MGCCQSSFLKPSSLHDKKITSDDLSGRRGKGAKRGNRHRHANINEGRGWHFSDVPDFSEF 60
Query: 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQF 117
S + LR ATNNF+ + +VS ++ PN+VY+G ++ D +R IAVKKF+K WPDPKQF
Sbjct: 61 SASVLRDATNNFNKNAVVSVCSDQEPNLVYQGCIRSDKD-KRLIAVKKFSKTTWPDPKQF 119
Query: 118 ADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRV 177
A EA +G LRH RL NLIGYCC+GDERLLV+EYMPN++L KHLFHWE QT+EWAMRLRV
Sbjct: 120 ATEARAIGSLRHVRLVNLIGYCCEGDERLLVSEYMPNESLTKHLFHWEKQTMEWAMRLRV 179
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP 237
ALY+AEAL+YC G LYHDLN RVLFDENG PRLSCFG MKNS+DGK++STNLAYTP
Sbjct: 180 ALYVAEALEYCRQSGLKLYHDLNTCRVLFDENGSPRLSCFGWMKNSKDGKNFSTNLAYTP 239
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297
PEYLR+G + PESV+FSFGT LLDLLSGKHIPPSHA+ I+ +N+ LMDSHLEGN+ E
Sbjct: 240 PEYLRSGTLIPESVVFSFGTFLLDLLSGKHIPPSHAVGTIQKQNLNVLMDSHLEGNYPEE 299
Query: 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHP 357
+A +VFDLAS+CL P ERP D++S + LQ + DVPSY MLGI + E+ +HP
Sbjct: 300 DAAMVFDLASKCLHNNPNERPEIGDIISVITTLQQKLDVPSYTMLGISKLEKLEM--EHP 357
Query: 358 LSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREK 417
S + DAC +MDL A+HQIL YK+DE T ELSFQ+W QQ++D+ R++GD AFR K
Sbjct: 358 KSLIYDACHQMDLAALHQILEAMEYKEDEVTCELSFQQWAQQIKDVCNTRQQGDSAFRNK 417
Query: 418 EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 477
F++A+D Y+QFI++G M+SPTVYARRS+C+L CDQPDAALRDAMQAQCVY DW TAFY+
Sbjct: 418 HFESAIDKYTQFIEIGIMISPTVYARRSMCYLFCDQPDAALRDAMQAQCVYSDWPTAFYL 477
Query: 478 QAVALAKLDMHKDAADMLKEAASLEEKR 505
QAVAL+KL+M +D+A MLKEA LE+KR
Sbjct: 478 QAVALSKLNMVEDSATMLKEALILEDKR 505
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1556 (552.8 bits), Expect = 9.6e-160, P = 9.6e-160
Identities = 303/453 (66%), Positives = 355/453 (78%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EF L L++AT FSSD IVSE GEKAPNVVY+GRL DG R IAVK+F + AW D
Sbjct: 38 FKEFKLEQLKSATGGFSSDNIVSEHGEKAPNVVYRGRLDDG----RLIAVKRFNRLAWAD 93
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF DEA VG LR RLANLIG C +G+ERLLVAE+MP++TLAKHLFHWEN ++WAM
Sbjct: 94 HRQFLDEAKAVGSLRSDRLANLIGCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAM 153
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVAL +A+AL+YCS++GR LYHDLNAYRVLFD++G+PRLSCFGLMKNSRDGKSYSTNL
Sbjct: 154 RLRVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNL 213
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
A+TPPEYLR GRVTPESV+FSFGTVLLDL+SGKHIPPSHALD+IRGKN LMDS LEG+
Sbjct: 214 AFTPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGH 273
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPT 353
FS+E+ T + LA+RCLQYE RERPN K LV++L LQ DV SYV++GIP EA
Sbjct: 274 FSNEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEE 333
Query: 354 PQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEG-TNELSFQEWTQQMRDMLEARKRGDV 412
L+P GDAC R+DLTAI +IL YKDDEG NELSFQ WT QM++ L ++K+GD+
Sbjct: 334 SPLSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDL 393
Query: 413 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472
AFR K+F TAVDCY+QFID GTMVSPTV+ARR L +LM D AL DA+QAQ V PDW
Sbjct: 394 AFRSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWP 453
Query: 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505
TA Y+QA L KL M DA LK+ +LE K+
Sbjct: 454 TALYLQAACLFKLGMEADAQQALKDGTTLEAKK 486
|
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| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1541 (547.5 bits), Expect = 3.7e-158, P = 3.7e-158
Identities = 298/455 (65%), Positives = 361/455 (79%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EFS+ LR AT+ F+++ IVSE GEKAPNVVYKG+L DN+R IAVK+F + AWPD
Sbjct: 41 FREFSIETLRNATSGFATENIVSEHGEKAPNVVYKGKL----DNQRRIAVKRFNRKAWPD 96
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF +EA VG+LR+ R+ANL+G C +G+ERLLVAE+MPN+TLAKHLFHWE+Q ++WAM
Sbjct: 97 SRQFLEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAM 156
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVAL+IA+AL+YC+ +GR LYHDLNAYRVLFD++ +PRLSCFGLMKNSRDGKSYSTNL
Sbjct: 157 RLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNL 216
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
A+TPPEYLR GRVTPESV++S+GT+LLDLLSGKHIPPSHALD+IR +NI L+DS LEG
Sbjct: 217 AFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQ 276
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPT 353
FSS++ T + LASRCLQYEPRERPN K LV+ + PLQ + PS+ ++GIP A T
Sbjct: 277 FSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSHQLMGIP--SSASTT 334
Query: 354 PQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGT-NELSFQEWTQQMRDMLEARKRGDV 412
P LSP+G+AC R DLTAIH+IL YKDDEG ELSFQ WT QM+D L +K+GDV
Sbjct: 335 P---LSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDV 391
Query: 413 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472
AFR KEF A+DCYSQFI+ GTMVSPTVYARRSLC+LM + P AL DAMQAQ + P W
Sbjct: 392 AFRHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQAQVISPAWH 451
Query: 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 507
A Y+QAVAL+ L +A LK+ + LE KR R
Sbjct: 452 IASYLQAVALSALGQENEAHAALKDGSMLESKRNR 486
|
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| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
Identities = 286/458 (62%), Positives = 363/458 (79%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EF L +LR ATN FS IVSE GEKAPNVVY+G+L+ GN +A+K+F++ +WPD
Sbjct: 38 FKEFELNELRKATNGFSPSCIVSEGGEKAPNVVYRGKLE-GN---HLVAIKRFSRQSWPD 93
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF EA GVGKLR+KR+ +LIG C +GDERLLVAEYMPNDTL+KHLFHWE Q + W M
Sbjct: 94 AQQFVVEATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDM 153
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
R+R+A YIAEALDYC+ E R +YHDLNAYR+LFDE GDPRLS FGLMKNSRDGKSYSTNL
Sbjct: 154 RVRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNL 213
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
AYTPPE+LR GRV PESVIFS+GT+LLDLLSGKHIPPSHALD+IRGKN L LMDS LEG
Sbjct: 214 AYTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQ 273
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPT 353
+++++AT + DLAS+CLQ E ++RP+TK L+S +APLQ + +V S+V++G+P++ PT
Sbjct: 274 YANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTVILPT 333
Query: 354 PQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGT-NELSFQEWTQQMRDMLEARKRGDV 412
LSP+G AC++MDL H IL+ T Y+D+EG NELSFQEWTQQ+++ML +K GD+
Sbjct: 334 M---LSPLGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFGDI 390
Query: 413 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472
AFR+K+FK +++ YS+ + + + S TV+ARR+ +LM DQ + ALRDAMQAQ P+W
Sbjct: 391 AFRDKDFKNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALRDAMQAQVCIPEWP 450
Query: 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510
TAFY+QA+AL+KL M DA DML + A+ + KRQ S R
Sbjct: 451 TAFYLQALALSKLGMETDAQDMLNDGAAYDAKRQNSWR 488
|
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| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1501 (533.4 bits), Expect = 6.5e-154, P = 6.5e-154
Identities = 290/453 (64%), Positives = 359/453 (79%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EFS+ +R AT+ F+++ IVSE GE+APNVVYKG+L+ N+R IAVK+F + +WPD
Sbjct: 41 FREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLE----NQRRIAVKRFNRKSWPD 96
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF +EA VG+LR+ R+ANL+G C + +ERLL+AE+MPN+TLAKHLFHWE+Q ++WAM
Sbjct: 97 SRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAM 156
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVAL+IA+AL+YC+S+GR LYHDLNAYRVLFD++ +PRLSCFGLMKNSRDGKSYSTNL
Sbjct: 157 RLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNL 216
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
A+TPPEYLR GRVTPESVI+SFGT+LLDLLSGKHIPPSHALD+IR +NI LMDS LEG
Sbjct: 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQ 276
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPT 353
FSS++ T + LASRCLQYEPRERPN K LVS + PLQ ++ S+ +LG+P A T
Sbjct: 277 FSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPN--SATTT 334
Query: 354 PQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEG-TNELSFQEWTQQMRDMLEARKRGDV 412
LSP+G+AC R DLTAIH+I+ YKDDEG T ELSFQ WT QM+D L +K+GD
Sbjct: 335 A---LSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDS 391
Query: 413 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472
AFR K+F A++CYSQFI+VGTM SPTV+AR+SLC+LM D P AL +AMQAQ + P W
Sbjct: 392 AFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWH 451
Query: 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505
A Y+QAVAL+ L +A LK+ A LE KR
Sbjct: 452 IASYLQAVALSALGQENEAHTALKDGAMLESKR 484
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1493 (530.6 bits), Expect = 4.5e-153, P = 4.5e-153
Identities = 286/452 (63%), Positives = 359/452 (79%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F E++L L+AAT+ F+ ++IVSE GEKAPNVVYKG+L+ N++ IAVK+FT+ AWPD
Sbjct: 40 FREYTLEQLKAATSGFAVEYIVSEHGEKAPNVVYKGKLE----NQKKIAVKRFTRMAWPD 95
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF +EA VG+LR +R+ANL+G CC+GDERLLVAE+MPN+TLAKHLFHWE Q ++W M
Sbjct: 96 SRQFLEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTM 155
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRV LY+A+AL+YC+S+GR LYHDLNAYRVLFDE +PRLS FGLMKNSRDGKSYSTNL
Sbjct: 156 RLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNL 215
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
A+TPPEYLR GR+TPESVI+SFGT+LLDLLSGKHIPPSHALD+IR +N+ L DS L+G
Sbjct: 216 AFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQ 275
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPT 353
FS + T + LASRCLQYE RERPNTK LV+ L PLQ +V S+V++G+P H +
Sbjct: 276 FSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLP-HSGSVS- 333
Query: 354 PQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEG-TNELSFQEWTQQMRDMLEARKRGDV 412
PLSP+G+ACSR DLTA+ +IL YKDDEG TNELSF WT QM++ L ++K+GDV
Sbjct: 334 ---PLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDV 390
Query: 413 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472
AFR+K+F+ A++CY+QFID G M+SPTV ARRSLC+LM D P AL DA+QAQ + P W
Sbjct: 391 AFRQKDFREAIECYTQFID-GGMISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWH 449
Query: 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504
A Y+Q+ +L L M K++ LKE ++LE K
Sbjct: 450 VASYLQSASLGILGMEKESQIALKEGSNLEAK 481
|
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| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1314 (467.6 bits), Expect = 4.2e-134, P = 4.2e-134
Identities = 259/452 (57%), Positives = 336/452 (74%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F E+SL L+ AT+ F+ + +VSE GE APNVVY+G+L+ N IA+K+F+ AWPD
Sbjct: 38 FREYSLEQLKIATSCFALENVVSEHGETAPNVVYQGKLE----NHMKIAIKRFSGTAWPD 93
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
P+QF +EA VG+LR KR+ANL+GYCC+G ERLLVAE+MPN+TLAKHLFHW+ + ++WAM
Sbjct: 94 PRQFLEEARLVGQLRSKRMANLLGYCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAM 153
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVALYI+EAL+YCS+ G LYHDLNAYRVLFDE +PRLS FGLMKNSRDGKSYSTNL
Sbjct: 154 RLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNL 213
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
A+TPPEYLR GR+T ESVI+SFGT+LLDLL+GKHIPPSHALD+IR +N+ L DS LEG
Sbjct: 214 AFTPPEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQ 273
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPT 353
FS + T + L S CLQYE RERPN K LV+ L LQ +V S+V++G+P+ T
Sbjct: 274 FSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSG----T 329
Query: 354 PQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVA 413
P SP +ACS DLT++ +IL YKDDE +LSF WT+QM++ + ++K+GD+A
Sbjct: 330 FASPPSPFAEACSGKDLTSMVEILEKIGYKDDE---DLSFM-WTEQMQEAINSKKKGDIA 385
Query: 414 FREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWST 473
FR K+F A++ Y+QF+D+G M+S TV RRS +LM + AL DAM+AQ + P W
Sbjct: 386 FRRKDFSEAIEFYTQFLDLG-MISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYV 444
Query: 474 AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505
A Y+Q+ AL+ L M K++ L E + LE ++
Sbjct: 445 ALYLQSAALSVLGMEKESQIALTEGSILEARK 476
|
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| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 253/454 (55%), Positives = 326/454 (71%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EFSL LR AT+ FS+D IVSE E+ PN+VYKG+L DG R IAVK+F + +WPD
Sbjct: 26 FLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDG----RKIAVKRFQRLSWPD 81
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+F +EA VG+ R + +ANLIG C +G ERLLVAEYMPN+TLAKHLFHWE + ++W M
Sbjct: 82 SLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHWEKRPMKWEM 141
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVAL+ A AL+YC+ G LYHDLN YR+LFD+ G+PRLSCFGLMK SR+GKSYSTNL
Sbjct: 142 RLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSREGKSYSTNL 201
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
A+ PPEYLR G V PESV FSFGT+LLDL+SG+HIPP+HALD+ RGKN L LMDS L+G
Sbjct: 202 AFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQ 261
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV-PSYVMLGIPRHEEAPP 352
FS E+ T + LASRCL+ EP ERP+ K L+S L+ L+ R ++ P+ IP P
Sbjct: 262 FSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEENIPTPSYTEP 321
Query: 353 TPQHPL--SPMGDACSRMDLTAIHQILVMTHYKDDEG--TNELSFQEWTQQMRDMLEARK 408
+ PL +P G+AC R+DL+ +H++L Y +D+ TNE SFQ WT QM++ ++ +K
Sbjct: 322 ATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQMQENMDYKK 381
Query: 409 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 468
GD AFR K+F+TA++ Y++F+ +VSPTV ARR LC+LM D AL DAMQ Q
Sbjct: 382 HGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALSDAMQTQVAS 441
Query: 469 PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
P++S A Y+QA L KL M +A + L+ +SLE
Sbjct: 442 PEFSIALYLQAACLLKLGMEAEAKEALRHGSSLE 475
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q944A7 | Y4523_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.8120 | 0.9921 | 0.9921 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00015561001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (508 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 512 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-30 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-23 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-23 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-22 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 1e-21 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-20 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-19 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 1e-18 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-15 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 8e-15 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-14 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-14 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 3e-13 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 9e-13 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 2e-12 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 5e-11 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 7e-11 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 7e-11 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 9e-11 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 1e-10 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-10 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-10 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 2e-10 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 2e-10 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 3e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-10 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-10 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 6e-10 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-09 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-09 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 2e-09 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 3e-09 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 4e-09 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 4e-09 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 6e-09 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 7e-09 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 7e-09 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-08 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 1e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 2e-08 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-08 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 2e-08 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-08 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 3e-08 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-08 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 5e-08 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 6e-08 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 6e-08 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 7e-08 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 9e-08 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 1e-07 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 1e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 1e-07 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-07 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-07 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 3e-07 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 3e-07 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-07 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 5e-07 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 1e-06 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 1e-06 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 1e-06 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 1e-06 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 2e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-06 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-06 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-06 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-06 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-06 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-06 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-06 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 2e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 3e-06 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 5e-06 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 6e-06 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 1e-05 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 2e-05 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-05 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-05 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 3e-05 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 3e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 3e-05 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-05 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 4e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 5e-05 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 6e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 6e-05 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 6e-05 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 6e-05 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 7e-05 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 7e-05 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 7e-05 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 7e-05 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 7e-05 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 7e-05 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 7e-05 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 8e-05 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 9e-05 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 1e-04 | |
| PLN03088 | 356 | PLN03088, PLN03088, SGT1, suppressor of G2 allele | 1e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 2e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 2e-04 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 2e-04 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 3e-04 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 3e-04 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 3e-04 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 3e-04 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 3e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 4e-04 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 4e-04 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 6e-04 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 6e-04 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 7e-04 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 8e-04 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 8e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 9e-04 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 9e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 0.001 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 0.001 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 0.001 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 0.001 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.001 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 0.002 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 0.002 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 0.002 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 0.002 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 0.002 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 0.002 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 0.002 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 0.002 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 0.002 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 0.002 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 0.002 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 0.003 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 0.003 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 0.003 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 0.003 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 0.003 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 0.004 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 0.004 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 0.004 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.004 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-30
Identities = 65/251 (25%), Positives = 94/251 (37%), Gaps = 51/251 (20%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGD 143
VY R + + +A+K K + E + KL H + L G D +
Sbjct: 8 TVYLARDKKTG---KKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN 64
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
LV EY +L L E + LR+ L I E L+Y S G + H DL
Sbjct: 65 HLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPE 121
Query: 203 RVLFDE-NGDPRLSCFGLMKNSRDGKSYST----NLAYTPPEYLRN-GRVTPESVIFSFG 256
+L D NG +L+ FGL K KS AY PE L G + +S I+S G
Sbjct: 122 NILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLG 181
Query: 257 TVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRE 316
+L +L D+IR + LQ +P +
Sbjct: 182 VILYEL--------PELKDLIR-----------------------------KMLQKDPEK 204
Query: 317 RPNTKDLVSTL 327
RP+ K+++ L
Sbjct: 205 RPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 99.5 bits (249), Expect = 1e-23
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 32/260 (12%)
Query: 85 VVYKGRL-QDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG L G+ +AVK + A ++F EA + KL H + L+G C +
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 143 DERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH- 197
+ ++V EYMP D L K+ + + + L AL IA ++Y S + H
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKN----RPKELSLSDLLSFALQIARGMEYLES--KNFIHR 127
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVI 252
DL A L EN ++S FGL ++ D Y + PE L+ G+ T +S +
Sbjct: 128 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDV 187
Query: 253 FSFGTVLLDLLS-GK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307
+SFG +L ++ + G+ + + L+ ++ L + E ++ L
Sbjct: 188 WSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPN------CPPE---LYKLML 238
Query: 308 RCLQYEPRERPNTKDLVSTL 327
+C +P +RP +LV L
Sbjct: 239 QCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 1e-23
Identities = 71/254 (27%), Positives = 105/254 (41%), Gaps = 26/254 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKH--AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYK + + +AVK K + E + +L H + LI D
Sbjct: 14 TVYKAKHKGTGKI---VAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDK 70
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
D LV EY L +L + ++AL I L+Y S G + H DL
Sbjct: 71 DHLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKP 126
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGR-VTPESVIFSFG 256
+L DENG +++ FGL K S T TP PE L G P+ ++S G
Sbjct: 127 ENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLG 186
Query: 257 TVLLDLLSGKHIPPSHALD----MIRGKNILH--LMDSHLEGNFSSEEATVVFDLASRCL 310
+L +LL+GK + +IR IL L + + SEEA DL +CL
Sbjct: 187 VILYELLTGKPPFSGENILDQLQLIR--RILGPPLEFDEPKWSSGSEEAK---DLIKKCL 241
Query: 311 QYEPRERPNTKDLV 324
+P +RP ++++
Sbjct: 242 NKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 96.8 bits (242), Expect = 1e-22
Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 37/262 (14%)
Query: 85 VVYKGRLQDGNDN-RRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCC 140
VYKG+L+ + +AVK + A +Q F EA + KL H + L+G C
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKLDHPNVVKLLGVCT 71
Query: 141 DGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+ + +V EYM L K+ + + L AL IA ++Y S +
Sbjct: 72 EEEPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIARGMEYLES--KNFI 124
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPES 250
H DL A L EN ++S FGL ++ D Y + PE L+ G+ T +S
Sbjct: 125 HRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKS 184
Query: 251 VIFSFGTVLLDLLS-GK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305
++SFG +L ++ + G+ + L+ ++ L + E ++DL
Sbjct: 185 DVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPN------CPPE---LYDL 235
Query: 306 ASRCLQYEPRERPNTKDLVSTL 327
+C +P +RP +LV L
Sbjct: 236 MLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.1 bits (235), Expect = 1e-21
Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 31/264 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VYKG+L+ + +AVK + A + K F EA + KL H + L+G C + +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 144 ERLLVAEYMPNDTLAKHL-------FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
LV EYM L +L E T+ L A+ IA+ ++Y +S +
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS--KKFV 127
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPE 249
H DL A L E+ ++S FGL ++ D Y + + PE L++G T +
Sbjct: 128 HRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSK 187
Query: 250 SVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304
S ++SFG +L ++ + G + L+ +R L + E +++
Sbjct: 188 SDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPE-----YCPDE----LYE 238
Query: 305 LASRCLQYEPRERPNTKDLVSTLA 328
L C Q +P +RP +LV L
Sbjct: 239 LMLSCWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 90.6 bits (226), Expect = 2e-20
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 26/257 (10%)
Query: 85 VVYKGRL-QDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG L DG +AVK + A + ++ F +EA + KL H + L+G C G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
+ +V EYMP L L + + L++AL IA+ ++Y S + H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLES--KNFVHRDLAA 130
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYST------NLAYTPPEYLRNGRVTPESVIFSF 255
L EN ++S FGL ++ + Y + + PE L++G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 256 GTVLLDLLSG-----KHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310
G +L ++ + + L+++ L + N E +++L +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPE-----NCPDE----LYELMLQCW 241
Query: 311 QYEPRERPNTKDLVSTL 327
Y+P +RP +LV L
Sbjct: 242 AYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 87.2 bits (217), Expect = 2e-19
Identities = 61/254 (24%), Positives = 94/254 (37%), Gaps = 34/254 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTK-HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VY R D + +A+K K D ++ E + KL+H + L D D
Sbjct: 14 KVYLAR--DKKTGKL-VAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDED 70
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN-AY 202
+ LV EY L L + + A I AL+Y H +
Sbjct: 71 KLYLVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYL--------HSKGIVH 120
Query: 203 R------VLFDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGRVTPESVIF 253
R +L DE+G +L+ FGL + G+ +T Y PE L I+
Sbjct: 121 RDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIW 180
Query: 254 SFGTVLLDLLSGKHIPP----SHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309
S G +L +LL+GK PP L++ + E + S E DL +
Sbjct: 181 SLGVILYELLTGK--PPFPGDDQLLELFKKIGKPKPPFPPPEWDISPE----AKDLIRKL 234
Query: 310 LQYEPRERPNTKDL 323
L +P +R ++
Sbjct: 235 LVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 1e-18
Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 24/250 (9%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V G + + +AVK + + F EA + LRH L L+G G+
Sbjct: 22 VMLGDYRG-----QKVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPL 75
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
+V EYM +L +L I A +L AL + E ++Y E + H DL A V
Sbjct: 76 YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYL--EEKNFVHRDLAARNV 133
Query: 205 LFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLL 263
L E+ ++S FGL K + G S + +T PE LR + + +S ++SFG +L ++
Sbjct: 134 LVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193
Query: 264 SGKHIP-PSHALDMIRGKNILHLMDSHLEGNFSSEEAT----VVFDLASRCLQYEPRERP 318
S +P P L + H+E + E V+ + C + +P +RP
Sbjct: 194 SFGRVPYPRIPLKDVV---------PHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRP 244
Query: 319 NTKDLVSTLA 328
K L LA
Sbjct: 245 TFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 7e-15
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 103 VKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF 162
VK+ + AD +GKL+H + LIG C L+ EY+ L++ L
Sbjct: 720 VKEINDVNSIPSSEIAD----MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL- 774
Query: 163 HWENQTIEWAMRLRVALYIAEALDY--CSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL- 219
+ + W R ++A+ IA+AL + C + +L+ +++ D +P L L
Sbjct: 775 ----RNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLP 829
Query: 220 ----MKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD 275
S AY PE +T +S I+ FG +L++LL+GK P+ A
Sbjct: 830 GLLCTDTKCFISS-----AYVAPETRETKDITEKSDIYGFGLILIELLTGKS--PADAEF 882
Query: 276 MIRGKNI---------LHL---MDSHLEGNFSSEEATVV--FDLASRCLQYEPRERPNTK 321
+ G + HL +D + G+ S + +V +LA C +P RP
Sbjct: 883 GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAN 942
Query: 322 DLVSTL 327
D++ TL
Sbjct: 943 DVLKTL 948
|
Length = 968 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 8e-15
Identities = 69/267 (25%), Positives = 112/267 (41%), Gaps = 37/267 (13%)
Query: 86 VYKGRLQDGNDNRR-WIAVKKFTKHAWPDPKQ--FADEAWGVGKLRHKRLANLIGYCCDG 142
V R DN +AVK H+ + + F E + L H+ + G C+
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSL-NHSGEEQHRSDFEREIEILRTLDHENIVKYKG-VCEK 77
Query: 143 DER---LLVAEYMPNDTLAKHL-FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHD 198
L+ EY+P+ +L +L H + I L + I + +DY S+ R ++ D
Sbjct: 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQ--INLKRLLLFSSQICKGMDYLGSQ-RYIHRD 134
Query: 199 LNAYRVLFDENGDPRLSCFGLMK--NSRDGKSYSTNLAYTP-----PEYLRNGRVTPESV 251
L A +L + ++S FGL K Y +P PE LR + + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 252 IFSFGTVLLDLLS-GKH--IPPSHALDMI---RGKNILHLMDSHLEGNFS--------SE 297
++SFG L +L + G PP+ L MI +G+ I+ + L+ E
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDE 254
Query: 298 EATVVFDLASRCLQYEPRERPNTKDLV 324
V+DL C + EP++RP+ DL+
Sbjct: 255 ----VYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 74.4 bits (181), Expect = 2e-14
Identities = 64/279 (22%), Positives = 103/279 (36%), Gaps = 35/279 (12%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK---QFADEAWGVGKLRH- 129
I+ + GE + VY R +R+ +A+K K K +F E + L H
Sbjct: 4 ILRKLGEGSFGEVYLAR------DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHP 57
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHL-FHWENQTIEWAMRLRVALYIAEALDYC 188
+ L + D LV EY+ +L L + + L + I AL+Y
Sbjct: 58 PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL 117
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSC-FGLMKNSRDGKSYSTN----------LAYTP 237
S+G ++ D+ +L D +G FGL K D S S+ Y
Sbjct: 118 HSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176
Query: 238 PEYLR---NGRVTPESVIFSFGTVLLDLLSGKH--------IPPSHALDMIRGKNILHLM 286
PE L + S I+S G L +LL+G S L +I + +
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL-ELPTPSL 235
Query: 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 325
S L + + DL + L +P+ R ++ +S
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274
|
Length = 384 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 3e-14
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
F +E + KL HK L L+G + +V E M L L + L+
Sbjct: 46 FLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQ 104
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTNLAY 235
+L +AE ++Y S+ + ++ DL A +L E+G ++S FGL + S + + +
Sbjct: 105 FSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKW 163
Query: 236 TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNF 294
T PE L++ + + +S ++S+G +L ++ S G+ P +L K + ++
Sbjct: 164 TAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEVKECVEKGYRMEP 218
Query: 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328
V+ L + C + EP++RP+ L L
Sbjct: 219 PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 3e-13
Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 60/306 (19%)
Query: 56 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRL--QDGNDNRRWIAVKKFTKHAWPD 113
E L+ +R + E GE A VYKG L + + +A+K ++A P
Sbjct: 1 EIPLSAVR----------FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK 50
Query: 114 PKQ-FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHL----------F 162
+Q F EA + L+H + L+G C ++ EY+ + L + L
Sbjct: 51 VQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGA 110
Query: 163 HWENQTIEWAMR----LRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCF 217
++T++ ++ L +A+ IA ++Y SS H DL A L E ++S F
Sbjct: 111 ESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS--HHFVHRDLAARNCLVGEGLTVKISDF 168
Query: 218 GLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK 266
GL SRD YS + + + PPE + G+ T ES I+SFG VL ++ S
Sbjct: 169 GL---SRDI--YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYG 223
Query: 267 HIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK 321
P ++MIR + +L + V+ L C P RP K
Sbjct: 224 LQPYYGFSNQEVIEMIRSRQLLPC---------PEDCPARVYALMIECWNEIPARRPRFK 274
Query: 322 DLVSTL 327
D+ + L
Sbjct: 275 DIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 9e-13
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 16/250 (6%)
Query: 81 KAPNVVYKGRLQD---GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIG 137
K + KG D G+ +AVK A + F EA + +LRH L L+G
Sbjct: 9 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+ L +V EYM +L +L + L+ +L + EA++Y E
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EANNFV 124
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-NLAYTPPEYLRNGRVTPESVIFS 254
H DL A VL E+ ++S FGL K + + + +T PE LR + + +S ++S
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 255 FGTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
FG +L ++ S +P P L K+++ ++ + + VV+D+ +C +
Sbjct: 185 FGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLD 239
Query: 314 PRERPNTKDL 323
RP+ L
Sbjct: 240 AATRPSFLQL 249
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 58/197 (29%), Positives = 85/197 (43%), Gaps = 25/197 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGDE 144
VYKG L+ + +AVK PD K+ F EA + + H + LIG C
Sbjct: 11 VYKGVLKGNTE----VAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQP 66
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS----EGRPLYH-DL 199
+V E +P +L L +N RL V + +LD + E + H DL
Sbjct: 67 IYIVMELVPGGSLLTFLRKKKN-------RLTVKKLLQMSLDAAAGMEYLESKNCIHRDL 119
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVI 252
A L EN ++S FG M +G Y+ + + +T PE L GR T ES +
Sbjct: 120 AARNCLVGENNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDV 178
Query: 253 FSFGTVLLDLLSGKHIP 269
+S+G +L + S P
Sbjct: 179 WSYGILLWETFSLGDTP 195
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 5e-11
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+AVK K DPK F EA + KLRH +L L C + +V E M +L ++
Sbjct: 33 VAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEY 91
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
L + ++ + +A +A + Y ++ ++ DL A VL EN +++ FGL
Sbjct: 92 LQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY-IHRDLAARNVLVGENNICKVADFGLA 150
Query: 221 K-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269
+ +R+G + + +T PE R + +S ++SFG +L ++++ +P
Sbjct: 151 RVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 7e-11
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 16/241 (6%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ GRL+ N +AVK + PD K +F EA + + H + LIG C
Sbjct: 11 VFSGRLRADNTP---VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 67
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+V E + L E ++ +++ A ++Y S+ ++ DL A
Sbjct: 68 IYIVMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNC 125
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSFGTV 258
L E ++S FG+ + DG ST + +T PE L GR + ES ++SFG +
Sbjct: 126 LVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGIL 185
Query: 259 LLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318
L + S +P ++ + + ++ + V+ L RC +Y+P +RP
Sbjct: 186 LWEAFSLGAVPYAN----LSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRP 241
Query: 319 N 319
+
Sbjct: 242 S 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 7e-11
Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+AVK + ++F EA + +++H L L+G C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL 219
L Q + + L +A I+ A++Y E + H DL A L EN +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGL 150
Query: 220 MKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHA 273
+ G +Y+ + + +T PE L + + +S +++FG VLL ++ + P
Sbjct: 151 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG-VLLWEIATYGMSPYPG 208
Query: 274 LDMIRGKNILHLMDSHLEGNFSSEE----ATVVFDLASRCLQYEPRERPNTKDL 323
+D+ + L LE + E V++L C Q+ P +RP+ ++
Sbjct: 209 IDL---SQVYEL----LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEI 255
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 9e-11
Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 74 IVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHK 130
+ E GE A V+ G +++ +AVK + A D ++ F EA + +H+
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 131 RLANLIGYCCDGDERLLVAEYMPNDTLAKHL-FHWENQTIEWAMR-----------LRVA 178
+ G C +GD ++V EYM + L K L H + + L++A
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 179 LYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------ 232
+ IA + Y +S+ ++ DL L + ++ FG+ SRD Y+T+
Sbjct: 129 VQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182
Query: 233 -----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLM 286
+ + PPE + + T ES ++SFG VL ++ + GK P + L + ++ +
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQ--PWYGLS---NEEVIECI 237
Query: 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
+ V+D+ C + +P++R N KD+ L
Sbjct: 238 TQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 1e-10
Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 33/272 (12%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVK--KFTKHAWPDPKQFADEAWGVGKLRHKRLANLI 136
GE V +G+L + ++ +AVK K H + + ++F EA + H + LI
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 137 GYCCDGDER------LLVAEYMPNDTLAKHLFHWE----NQTIEWAMRLRVALYIAEALD 186
G C + +++ +M + L L + + + L+ + IA ++
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 187 YCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EY 240
Y S+ ++ DL A + E+ ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFS 295
L + T +S +++FG + ++ + P D +R N L + L+
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDE--- 243
Query: 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
++DL C + +P++RP L L
Sbjct: 244 ------LYDLMYSCWRADPKDRPTFTKLREVL 269
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 1e-10
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 19/252 (7%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD---EAWGVGKLRHKRLANLIGYCCDG 142
V +GRL+ +A+K T A KQ D EA +G+ H + L G
Sbjct: 20 VCRGRLKLPGKKEIDVAIK--TLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS 77
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+++ EYM N +L K L + + + + IA + Y S ++ DL A
Sbjct: 78 RPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLSEMNY-VHRDLAAR 135
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKS-YSTN-----LAYTPPEYLRNGRVTPESVIFSFG 256
+L + N ++S FGL + D ++ Y+T + +T PE + + T S ++SFG
Sbjct: 136 NILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFG 195
Query: 257 TVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH-LEGNFSSEEATVVFDLASRCLQYEPR 315
V+ +++S P DM I + D + L A ++ L C Q +
Sbjct: 196 IVMWEVMSYGERP---YWDMSNQDVIKAVEDGYRLPPPMDCPSA--LYQLMLDCWQKDRN 250
Query: 316 ERPNTKDLVSTL 327
ERP +VSTL
Sbjct: 251 ERPTFSQIVSTL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 1e-10
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 18/250 (7%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+KG L+D + +AVK + + K +F EA + + H + LIG C
Sbjct: 11 VFKGTLKD----KTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQP 66
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+V E +P L + ++ ++ AL A + Y S+ ++ DL A
Sbjct: 67 IYIVMELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNC 124
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L EN ++S FG+ + DG S+ L +T PE L GR + ES ++S+G +L
Sbjct: 125 LVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL 184
Query: 260 LDLLSGKHIP-PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318
+ S P P R + ++ + + V+ + RC Y+P RP
Sbjct: 185 WETFSLGVCPYPGMTNQQAREQ-----VEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRP 239
Query: 319 NTKDLVSTLA 328
+L LA
Sbjct: 240 KFSELQKELA 249
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 2e-10
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 35/260 (13%)
Query: 96 DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155
++ +AVK K F EA + L+H+ + G C DGD ++V EYM +
Sbjct: 33 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 92
Query: 156 TLAKHLF--------------HWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
L K L + + L +A IA + Y +S+ ++ DL
Sbjct: 93 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLAT 151
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSF 255
L N ++ FG+ ++ Y + + PPE + + T ES ++SF
Sbjct: 152 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211
Query: 256 GTVLLDLLS-GK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310
G +L ++ + GK + + ++ I +L +E V+D+ C
Sbjct: 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVLE------RPRVCPKE---VYDIMLGCW 262
Query: 311 QYEPRERPNTKDLVSTLAPL 330
Q EP++R N K++ L L
Sbjct: 263 QREPQQRLNIKEIYKILHAL 282
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 2e-10
Identities = 60/206 (29%), Positives = 84/206 (40%), Gaps = 33/206 (16%)
Query: 126 KLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE- 183
++ H + L Y +E+L LV EY P L HL + E A Y AE
Sbjct: 49 RINHPFIVKLH-YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERA-----RFYAAEI 102
Query: 184 --ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP---- 237
AL+Y S G +Y DL +L D +G +L+ FGL K S + TP
Sbjct: 103 VLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLA 161
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG----- 292
PE L +S G +L ++L+GK PP +A D + + L+
Sbjct: 162 PEVLLGKGYGKAVDWWSLGVLLYEMLTGK--PPFYAEDRKE------IYEKILKDPLRFP 213
Query: 293 -NFSSEEATVVFDLASRCLQYEPRER 317
S E DL S LQ +P +R
Sbjct: 214 EFLSPEAR----DLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 3e-10
Identities = 55/246 (22%), Positives = 106/246 (43%), Gaps = 13/246 (5%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V++G + NR +A+K + F E + +LRHK L +L C G+
Sbjct: 22 VWEGLWK----NRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPV 77
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205
++ E M +L L E Q + A + +A +AE + Y + ++ DL A +L
Sbjct: 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNIL 136
Query: 206 FDENGDPRLSCFGLMKNSRDG--KSYSTNLAY--TPPEYLRNGRVTPESVIFSFGTVLLD 261
E+ +++ FGL + ++ S + Y T PE +G + +S ++SFG +L +
Sbjct: 137 VGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYE 196
Query: 262 LLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK 321
+ + +P + + + + ++ ++ + C EP +RP+ K
Sbjct: 197 MFTYGQVPYPGMNN----HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFK 252
Query: 322 DLVSTL 327
L L
Sbjct: 253 ALREEL 258
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 5e-10
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWA 172
P+ F EA + KLRH++L L Y +E + +V EYM +L L + +
Sbjct: 45 PEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 102
Query: 173 MRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-------NSRD 225
+ +A IA + Y ++ DL A +L EN +++ FGL + +R
Sbjct: 103 QLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 161
Query: 226 GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285
G + + +T PE GR T +S ++SFG +L +L + +P ++ + +L
Sbjct: 162 GAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQ 215
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318
++ E + DL +C + EP ERP
Sbjct: 216 VERGYRMPCPPECPESLHDLMCQCWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 6e-10
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 25/224 (11%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE-WAMRL 175
F +EA + KL H L L G C +V EYM N L +L E + L
Sbjct: 46 FIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYL--RERKGKLGTEWLL 103
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--- 232
+ + EA++Y S G ++ DL A L E+ ++S FGL + D + S+
Sbjct: 104 DMCSDVCEAMEYLESNGF-IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK 162
Query: 233 --LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-----PSHALDMI-RGKNILH 284
+ + PPE R + +S ++SFG ++ ++ S +P S ++ + G
Sbjct: 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG---YR 219
Query: 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328
L L T V+ + C +P +RP K L+S L
Sbjct: 220 LYRPKL-------APTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 6e-10
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRL 175
F + A + +L HK L G C GDE ++V EY+ +L +L +N I W +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 176 RVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--- 231
VA +A AL + E + L H ++ A VL D + +K S G S +
Sbjct: 104 EVAKQLAWALHFL--EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161
Query: 232 -----NLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285
+ + PPE + N + ++ + +SFGT L ++ SG P S ALD K +
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQFY 218
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
D H + + T + +L ++C+ YEP RP+ + ++ L
Sbjct: 219 EDRH---QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 1e-09
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
Query: 116 QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL 175
+F +EA + KL H++L L G C +V EYM N L +L + + + L
Sbjct: 45 EFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYL-REHGKRFQPSQLL 103
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---- 231
+ + E + Y S+ + ++ DL A L D+ G ++S FGL + D + S+
Sbjct: 104 EMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSK 162
Query: 232 -NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP------PSHALDMIRGKNILH 284
+ ++PPE L + + +S +++FG ++ ++ S +P + +G L
Sbjct: 163 FPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG---LR 219
Query: 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
L HL +SE+ V+ + C + ERP + L+S++
Sbjct: 220 LYRPHL----ASEK---VYAIMYSCWHEKAEERPTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+AVK K P+ F EA + KLRH +L L C + + +V EYM +L
Sbjct: 33 VAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDF 91
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL 219
L E + + + +A IAE + Y E R H DL A +L EN +++ FGL
Sbjct: 92 LKSGEGKKLRLPQLVDMAAQIAEGMAYL--ESRNYIHRDLAARNILVGENLVCKIADFGL 149
Query: 220 MK-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269
+ +R+G + + +T PE GR T +S ++SFG +L ++++ +P
Sbjct: 150 ARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 2e-09
Identities = 57/259 (22%), Positives = 112/259 (43%), Gaps = 16/259 (6%)
Query: 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLAN 134
V E G +V+ G +R +A+K + A + + F +EA + KL H +L
Sbjct: 9 VQEIGSGQFGLVWLGYWL----EKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQ 63
Query: 135 LIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
L G C + LV E+M + L+ +L + + + L + L + E + Y
Sbjct: 64 LYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETL-LGMCLDVCEGMAYL-ESSNV 121
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPE 249
++ DL A L EN ++S FG+ + D + S+ + ++ PE + + +
Sbjct: 122 IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSK 181
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309
S ++SFG ++ ++ S P + ++ +++ + V++L C
Sbjct: 182 SDVWSFGVLMWEVFSEGKTP----YENRSNSEVVETINAGFRLYKPRLASQSVYELMQHC 237
Query: 310 LQYEPRERPNTKDLVSTLA 328
+ P +RP+ L+ LA
Sbjct: 238 WKERPEDRPSFSLLLHQLA 256
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 3e-09
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 18/235 (7%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+A+K + A + + F +EA + KL H +L L G C +V E+M N L +
Sbjct: 31 VAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNY 89
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
L + + + M L + + E ++Y ++ DL A L G ++S FG+
Sbjct: 90 LRQRQGK-LSKDMLLSMCQDVCEGMEYLERNSF-IHRDLAARNCLVSSTGVVKVSDFGMT 147
Query: 221 KNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD 275
+ D + S++ A ++PPE + + +S ++SFG ++ ++ + +P
Sbjct: 148 RYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMP------ 201
Query: 276 MIRGKNILHLMDSHLEGN--FSSEEAT-VVFDLASRCLQYEPRERPNTKDLVSTL 327
K+ +++ G + + A+ V+++ C +P RP +L+ +
Sbjct: 202 -FEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 4e-09
Identities = 59/259 (22%), Positives = 100/259 (38%), Gaps = 35/259 (13%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY+G + + +AVK P ++ F EA+ + + H + LIG + +
Sbjct: 22 VYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAEALDYCSSEGRPLYHDLNA 201
+V E P L +L + LY ++ AL Y S+ R ++ D+ A
Sbjct: 81 VWIVMELAPLGELRSYL----QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAA 135
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP-----PEYLRNGRVTPESVIFSFG 256
VL +L FGL + D Y + P PE + R T S ++ FG
Sbjct: 136 RNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 195
Query: 257 TVLLDLLS-GKHIPPSHAL---DMIRGKNILHLMDSHLE-GN---FSSEEATVVFDLASR 308
+ ++L G P + D+I +E G ++ L ++
Sbjct: 196 VCMWEILMLGVK--PFQGVKNNDVI----------GRIENGERLPMPPNCPPTLYSLMTK 243
Query: 309 CLQYEPRERPNTKDLVSTL 327
C Y+P +RP +L + L
Sbjct: 244 CWAYDPSKRPRFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 4e-09
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP--- 237
I + LDY SE R ++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 238 -PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296
PE ++ ++ I+S G ++L G+ PP+ L +R +L L+ +
Sbjct: 169 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMR---VLFLIPKNSPPTLEG 223
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLV 324
+ + + CL +PR RP K+L+
Sbjct: 224 QYSKPFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 6e-09
Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 42/220 (19%)
Query: 126 KLRHKRLANLIGYCCD--GDERLLVAEYMPNDTLAKHL-----FHWENQTIEWAMRLRVA 178
L+H + G D + + EY+ +L+ L E +
Sbjct: 55 SLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLP-EPV---------IR 104
Query: 179 LY---IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMK------NSRDGKS 228
Y I E L Y S G + H D+ +L D +G +L+ FG K S
Sbjct: 105 KYTRQILEGLAYLHSNG--IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGS 162
Query: 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHI-----PPSHALDMIRGKNIL 283
+ PE +R + I+S G ++++ +GK P AL I
Sbjct: 163 VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEP 222
Query: 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
+ HL SEEA D +CL+ +P++RP +L
Sbjct: 223 PEIPEHL-----SEEA---KDFLRKCLRRDPKKRPTADEL 254
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 7e-09
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 165 ENQTIEWAMRLRVALYIAEALDYC----SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
E + IE R+ + AL C L+ DL + D N + +L FGL
Sbjct: 98 ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157
Query: 221 KNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM 276
K S++ TP PE L + +S I+S G ++ +L + PP A
Sbjct: 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA--- 212
Query: 277 IRGKNILHLMDSHLEGNFS------SEEATVVFDLASRCLQYEPRERPNTKDL 323
+N L L EG F S E + ++ L +P +RP+T++L
Sbjct: 213 ---RNQLQLASKIKEGKFRRIPYRYSSE---LNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 7e-09
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 17/222 (7%)
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWA 172
P+ F EA + KLRH +L L Y +E + +V E+M +L L + + ++
Sbjct: 45 PEAFLQEAQIMKKLRHDKLVPL--YAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLP 102
Query: 173 MRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-------NSRD 225
+ +A IA+ + Y ++ DL A +L +N +++ FGL + +R
Sbjct: 103 QLVDMAAQIADGMAYIERMNY-IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ 161
Query: 226 GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285
G + + +T PE GR T +S ++SFG +L +L++ +P ++ + +L
Sbjct: 162 GAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN----REVLEQ 215
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
++ + +L C + +P ERP + + S L
Sbjct: 216 VERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFL 257
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 126 KLRHKRLANLIGY-CC--DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA 182
K +H N++ Y DE +V E+ +L K L NQT+ + V +
Sbjct: 53 KCKHP---NIVKYYGSYLKKDELWIVMEFCSGGSL-KDLLKSTNQTLTESQIAYVCKELL 108
Query: 183 EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTNLAYTPPE 239
+ L+Y S G ++ D+ A +L +G+ +L FGL + +++ + + PE
Sbjct: 109 KGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPE 167
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299
+ ++ I+S G ++L GK PP L ++ + + + G + E+
Sbjct: 168 VINGKPYDYKADIWSLGITAIELAEGK--PPYSELPPMKA--LFKIATNGPPGLRNPEKW 223
Query: 300 TVVF-DLASRCLQYEPRERPNTKDL 323
+ F D +CLQ P +RP + L
Sbjct: 224 SDEFKDFLKKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 1e-08
Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 38/277 (13%)
Query: 75 VSESGEKAPNVVYKGRLQ-DGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRL 132
+ E GE A +YKG L G D+ + +A+K P +F EA + +L H +
Sbjct: 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNI 69
Query: 133 ANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW-----------ENQTIEWAMR----LRV 177
L+G ++ EY+ L + L E+ T++ ++ L +
Sbjct: 70 VCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHI 129
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN----- 232
A+ IA ++Y SS ++ DL A +L E ++S GL + Y
Sbjct: 130 AIQIAAGMEYLSSHFF-VHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLL 188
Query: 233 -LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-----PSHALDMIRGKNILHLM 286
+ + PPE + G+ + +S I+SFG VL ++ S P ++M+R + +L
Sbjct: 189 PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPC- 247
Query: 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
S + ++ L + C Q P RP KD+
Sbjct: 248 --------SEDCPPRMYSLMTECWQEGPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 44/267 (16%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-------FADEAWGVGKLRHKRLANLIGY 138
+YKG L+ +D + F + A + +L HK L L G
Sbjct: 11 IYKGVLRVQSDLDIVGPGQ-EVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGV 69
Query: 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE------- 191
C DE ++V EY+ L L H E + +L VA +A AL Y +
Sbjct: 70 CV-RDENIMVEEYVKFGPLDVFL-HREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNV 127
Query: 192 -GRPLY---HDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVT 247
G+ + + LN V F + DP + L + R + + PE +RNG+ +
Sbjct: 128 CGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERI-----PWIAPECIRNGQAS 182
Query: 248 PESV--IFSFGTVLLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300
+SFGT LL++ S P S + ++ L + D
Sbjct: 183 LTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPDC-----------A 231
Query: 301 VVFDLASRCLQYEPRERPNTKDLVSTL 327
+ +L ++C Y+P +RP+ + ++ L
Sbjct: 232 ELANLINQCWTYDPTKRPSFRAILRDL 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAK 159
+AVK K P+ F +EA + KLRH +L L Y +E + +V EYM +L
Sbjct: 33 VAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 89
Query: 160 HLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219
L E + ++ + +A +A + Y ++ DL + +L + +++ FGL
Sbjct: 90 FLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IHRDLRSANILVGDGLVCKIADFGL 148
Query: 220 MK-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PS 271
+ +R G + + +T PE GR T +S ++SFG +L +L++ +P P
Sbjct: 149 ARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206
Query: 272 HALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
+ + +L ++ + + +L +C + +P ERP + L S L
Sbjct: 207 -----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFL 257
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 55.1 bits (132), Expect = 2e-08
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP--- 237
I + LDY SE + ++ D+ A VL E+G+ +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 238 -PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH----LEG 292
PE ++ ++ I+S G ++L G+ PP L ++ +L L+ + LEG
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGE--PPHSELHPMK---VLFLIPKNNPPTLEG 223
Query: 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHE 348
N+S + + CL EP RP K+L+ ++ SY+ I R++
Sbjct: 224 NYSKP----LKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKT-SYLTELIDRYK 274
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 2e-08
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 29/228 (12%)
Query: 127 LRHKRLANLIGYCCDGDER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEA 184
L H+ + G C + + L+ EY+P +L +L + A L A I E
Sbjct: 63 LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL---PKHKLNLAQLLLFAQQICEG 119
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY-------STNLAYTP 237
+ Y S+ ++ DL A VL D + ++ FGL K +G Y + + +
Sbjct: 120 MAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 178
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLS---GKHIPPSHALDMIRGK----NILHLMDSHL 290
E L+ + + S ++SFG L +LL+ K PP +MI K ++ L++
Sbjct: 179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238
Query: 291 EG------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332
G +E V+ L C + E + RP + L+ L + +
Sbjct: 239 RGMRLPCPKNCPQE---VYILMKNCWETEAKFRPTFRSLIPILKEMHH 283
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 3e-08
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 127 LRHKRLANLIGYCCDGDER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEA 184
L H+ + G C + L+ E++P+ +L ++L +N+ I +L+ A+ I +
Sbjct: 63 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK-INLKQQLKYAVQICKG 121
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-------NLAYTP 237
+DY S + ++ DL A VL + ++ FGL K K Y T + +
Sbjct: 122 MDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYA 180
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLS---GKHIPPSHALDMI---RGK-NILHLMDSHL 290
PE L + S ++SFG L +LL+ + P + L MI G+ + L+
Sbjct: 181 PECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE 240
Query: 291 EG-------NFSSEEATVVFDLASRCLQYEPRERPNTKDLV 324
EG N E V+ L +C +++P +R ++L+
Sbjct: 241 EGKRLPRPPNCPEE----VYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 37/257 (14%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VVYKG + D ++A+K+ + K E + L+H + IG
Sbjct: 15 VVYKGLNLETGD---FVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS 71
Query: 143 DERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVALYIA---EALDYCSSEGRPLYH 197
D ++ EY N +L + + F +++ VA+Y+ + L Y +G + H
Sbjct: 72 DSLYIILEYAENGSLRQIIKKFGPFPESL-------VAVYVYQVLQGLAYLHEQG--VIH 122
Query: 198 -DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVI 252
D+ A +L ++G +L+ FG+ D ++ TP PE + + S I
Sbjct: 123 RDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDI 182
Query: 253 FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM--DSH--LEGNFSSEEATVVFDLASR 308
+S G +++LL+G PP + L+ L + D H L S E + D +
Sbjct: 183 WSLGCTVIELLTGN--PPYYDLN---PMAALFRIVQDDHPPLPEGISPE----LKDFLMQ 233
Query: 309 CLQYEPRERPNTKDLVS 325
C Q +P RP K L+
Sbjct: 234 CFQKDPNLRPTAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 5e-08
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 16/251 (6%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTK-HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V KG + +AVK + H K+F EA + +L H + LIG C G+
Sbjct: 11 VVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCKGEP 69
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+LV E P L K+L + + I + +A +A + Y S+ ++ DL A V
Sbjct: 70 LMLVMELAPLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNV 126
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSFGT 257
L ++S FG+ + G Y L + PE + G+ + +S ++S+G
Sbjct: 127 LLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGV 186
Query: 258 VLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRER 317
L + S P ++G ++ +++S E ++ + C +Y P +R
Sbjct: 187 TLWEAFSYGAKPYGE----MKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDR 242
Query: 318 PNTKDLVSTLA 328
P +L ST
Sbjct: 243 PTFSELESTFR 253
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 6e-08
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 96 DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155
+ +A+K K P+ F EA + +L+H RL L + ++ EYM N
Sbjct: 28 NGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ-EPIYIITEYMENG 85
Query: 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215
+L L E + + +A IAE + + + ++ DL A +L E +++
Sbjct: 86 SLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY-IHRDLRAANILVSETLCCKIA 144
Query: 216 CFGLMK-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHI 268
FGL + +R+G + + +T PE + G T +S ++SFG +L ++++ I
Sbjct: 145 DFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRI 202
Query: 269 P-PSHA-LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326
P P ++I+ + M N E +++L C + +P ERP + L S
Sbjct: 203 PYPGMTNPEVIQNLERGYRMPR--PDNCPEE----LYELMRLCWKEKPEERPTFEYLRSV 256
Query: 327 L 327
L
Sbjct: 257 L 257
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 6e-08
Identities = 72/266 (27%), Positives = 112/266 (42%), Gaps = 55/266 (20%)
Query: 91 LQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150
L+D +DN R K F EA + L+H+ + G C +GD ++V E
Sbjct: 43 LKDASDNAR---------------KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 87
Query: 151 YMPNDTLAKHL-FHWENQT----------IEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199
YM + L K L H + + + L +A IA + Y +S+ ++ DL
Sbjct: 88 YMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDL 146
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVTP 248
L EN ++ FG+ SRD YST+ + + PPE + + T
Sbjct: 147 ATRNCLVGENLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTT 201
Query: 249 ESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV---VFD 304
ES ++S G VL ++ + GK P + L N +++ +G T V+D
Sbjct: 202 ESDVWSLGVVLWEIFTYGKQ--PWYQLS----NN--EVIECITQGRVLQRPRTCPKEVYD 253
Query: 305 LASRCLQYEPRERPNTKDLVSTLAPL 330
L C Q EP R N K++ S L L
Sbjct: 254 LMLGCWQREPHMRLNIKEIHSLLQNL 279
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 7e-08
Identities = 59/202 (29%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGR 193
Y G + L LV EY+P LA L + + + A +YIAE AL+Y S G
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVA-----RIYIAEIVLALEYLHSNG- 113
Query: 194 PLYHDLNAYRVLFDENG-----DPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYL 241
++ DL +L D NG D LS GL++ + Y PE +
Sbjct: 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI 173
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHA--LDMIRGKNILHLMDSHLEGNFSSEEA 299
+ +S G +L + L G IPP H + I +NIL+ E S+EA
Sbjct: 174 LGQGHSKTVDWWSLGCILYEFLVG--IPPFHGETPEEIF-QNILNGKIEWPEDVEVSDEA 230
Query: 300 TVVFDLASRCLQYEPRERPNTK 321
DL S+ L +P +R K
Sbjct: 231 ---IDLISKLLVPDPEKRLGAK 249
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 9e-08
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 13/218 (5%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
F EA +G+ H + L G G+ ++V EYM N L L E Q + A +L
Sbjct: 53 FLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQLM 110
Query: 177 VALY-IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--- 232
L +A + Y S G ++ L A++VL + + ++S F ++ + Y+T
Sbjct: 111 GMLPGLASGMKYLSEMGY-VHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGK 169
Query: 233 --LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL 290
+ + PE ++ + S ++SFG V+ +++S P DM G++++ ++
Sbjct: 170 SPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERP---YWDM-SGQDVIKAVEDGF 225
Query: 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328
++ L C Q E ERP + S L+
Sbjct: 226 RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 1e-07
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 29/254 (11%)
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHL---------FHWE-----NQTIEWAM 173
+HK + NL+G C ++ EY L ++L + ++ + + +
Sbjct: 76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKD 135
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY--ST 231
+ A +A ++Y +S+ + ++ DL A VL E+ +++ FGL ++ + Y +T
Sbjct: 136 LVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTT 194
Query: 232 N----LAYTPPEYLRNGRVTPESVIFSFGTVLLDL--LSGKHIPPSHALDMIRGKNILHL 285
N + + PE L + T +S ++SFG +L ++ L G P ++ + H
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR 254
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 345
MD N + E ++ + C P +RP K LV L + Y+ L +P
Sbjct: 255 MDK--PANCTHE----LYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTSTDEYLDLSVP 308
Query: 346 RHEEAPPTPQHPLS 359
+ +P P P S
Sbjct: 309 FEQYSPGCPDSPSS 322
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 24/260 (9%)
Query: 86 VYKG--RLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VY+G R +DG+ +AVK + D F EA + K H+ + LIG +
Sbjct: 22 VYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81
Query: 143 DERLLVAEYMPNDTLAKHLFHWEN---QTIEWAMR--LRVALYIAEALDYCSSEGRPLYH 197
R ++ E M L L + M+ L A +A+ Y E ++
Sbjct: 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL-EENHFIHR 140
Query: 198 DLNAYRVLFDENGDPR---LSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTP 248
D+ A L G R ++ FG+ ++ Y + + PPE +G T
Sbjct: 141 DIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTS 200
Query: 249 ESVIFSFGTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307
++ ++SFG +L ++ S ++P P + ++ + + V+ + +
Sbjct: 201 KTDVWSFGVLLWEIFSLGYMPYPGR-----TNQEVMEFVTGGGRLDPPKGCPGPVYRIMT 255
Query: 308 RCLQYEPRERPNTKDLVSTL 327
C Q+ P +RPN ++ +
Sbjct: 256 DCWQHTPEDRPNFATILERI 275
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 1e-07
Identities = 18/97 (18%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 408 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 467
G++ ++ ++ A++ Y + +++ + Y + + + + AL D +A +
Sbjct: 5 NLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALEL 63
Query: 468 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504
PD + A+Y +A KL +++A + ++A L+
Sbjct: 64 DPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 20/223 (8%)
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR 174
+ F +EA + L+H +L L + ++ EYM +L L E +
Sbjct: 46 QAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL 105
Query: 175 LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-------NSRDGK 227
+ + IAE + Y + ++ DL A VL E+ +++ FGL + +R+G
Sbjct: 106 IDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA 164
Query: 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287
+ + +T PE + G T +S ++SFG +L ++++ IP G + +M
Sbjct: 165 KFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP-------YPGMSNSDVMS 215
Query: 288 SHLEGNFSSEEATV---VFDLASRCLQYEPRERPNTKDLVSTL 327
+ G ++D+ C + + ERP L S L
Sbjct: 216 ALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVL 258
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 3e-07
Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 46/261 (17%)
Query: 97 NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156
++ +AVK + + + F EA + L+H+ + G C +G L+V EYM +
Sbjct: 34 DKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGD 93
Query: 157 L----------AKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
L AK L E+ + L +A IA + Y +S ++ DL
Sbjct: 94 LNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRN 152
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVTPESVI 252
L + ++ FG+ SRD YST+ + + PPE + + T ES I
Sbjct: 153 CLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDI 207
Query: 253 FSFGTVLLDLLS-GK----HIPPSHALDMI-RGKNILHLMDSHLEGNFSSEEATVVFDLA 306
+SFG VL ++ + GK + + A++ I +G+ + E V+ +
Sbjct: 208 WSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPE----------VYAIM 257
Query: 307 SRCLQYEPRERPNTKDLVSTL 327
C Q EP++R KD+ S L
Sbjct: 258 QGCWQREPQQRMVIKDIHSRL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 59/282 (20%), Positives = 110/282 (39%), Gaps = 38/282 (13%)
Query: 69 FSSDFIVSESGEK-APNVVYKG---RLQDGNDNRRWIAVKKFTKHAWPDPK----QFADE 120
I S+ +K ++ + + G N + + ++ F K K +E
Sbjct: 10 NDIKCIESDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTF-KKFHKGHKVLIDITENE 68
Query: 121 AWGVGKLRHKRLANLIGY---CCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
+ ++ + + G+ D RL L+ EY L + L + + + +L
Sbjct: 69 IKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLD 126
Query: 177 VALYIAEAL-DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-LA 234
+A+ + L + +P Y +L + L EN ++ C GL K + N +
Sbjct: 127 MAIDCCKGLYNLYKYTNKP-YKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMV 185
Query: 235 YTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHA-----LDMIRGKNI-LHL- 285
Y + L + T + I+S G VL ++ +GK IP + D+I KN L L
Sbjct: 186 YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK-IPFENLTTKEIYDLIINKNNSLKLP 244
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
+D LE + C ++ +RPN K+++ L
Sbjct: 245 LDCPLEIK----------CIVEACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 22/257 (8%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCCDG 142
V++G L+ +A+K T KQ F EA +G+ H + L G
Sbjct: 21 VFRGILKMPGRKEVAVAIK--TLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF 78
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY--IAEALDYCSSEGRPLYHDLN 200
+++ EYM N L K+L + E++ V + IA + Y S+ ++ DL
Sbjct: 79 KPAMIITEYMENGALDKYL---RDHDGEFSSYQLVGMLRGIAAGMKYL-SDMNYVHRDLA 134
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGK--SYSTN-----LAYTPPEYLRNGRVTPESVIF 253
A +L + N + ++S FGL + D +Y+T+ + +T PE + + T S ++
Sbjct: 135 ARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVW 194
Query: 254 SFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
SFG V+ +++S P DM ++ ++ + + V+ L +C Q +
Sbjct: 195 SFGIVMWEVMSFGERP---YWDM-SNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQD 250
Query: 314 PRERPNTKDLVSTLAPL 330
RP D+V+ L L
Sbjct: 251 RARRPRFVDIVNLLDKL 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 33/257 (12%)
Query: 86 VYKGRLQD----GNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKRLANLIGYCC 140
VY+G D G+ R +AVK K A K +F EA + H + L+G C
Sbjct: 11 VYEGTATDILGPGSGPIR-VAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL 69
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS-----SEGRPL 195
+ + ++ E M L +L + + L + + LD + +
Sbjct: 70 LNEPQYIIMELMEGGDLLSYLRDARVERFGPPL-LTLKELLDICLDVAKGCVYLEQMHFI 128
Query: 196 YHDLNAYRVLFDENGDPR-----LSCFGLMKNSRDGKSYST------NLAYTPPEYLRNG 244
+ DL A L E G + FGL ++ Y + + PE L +G
Sbjct: 129 HRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDG 188
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSHLEGNFSSEEATV-- 301
+ T +S ++SFG ++ ++L+ P P+ + +L + + G E
Sbjct: 189 KFTTQSDVWSFGVLMWEILTLGQQPYPALN-----NQEVLQHVTA--GGRLQKPENCPDK 241
Query: 302 VFDLASRCLQYEPRERP 318
++ L + C +P ERP
Sbjct: 242 IYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 5e-07
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 22/255 (8%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +GRL+ ++A+K K + + + F EA +G+ H + +L G
Sbjct: 20 VCRGRLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR 78
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQ--TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
+++ E+M N L L + Q I+ LR IA + Y SE ++ DL A
Sbjct: 79 PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL-SEMNYVHRDLAA 134
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKS---YSTNLA------YTPPEYLRNGRVTPESVI 252
+L + N ++S FGL + D S Y+++L +T PE + + T S +
Sbjct: 135 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDV 194
Query: 253 FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
+S+G V+ +++S P DM +++++ ++ + T + L C Q
Sbjct: 195 WSYGIVMWEVMSYGERP---YWDM-SNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQK 250
Query: 313 EPRERPNTKDLVSTL 327
+ RP +VSTL
Sbjct: 251 DRNARPKFGQIVSTL 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 59/256 (23%), Positives = 99/256 (38%), Gaps = 44/256 (17%)
Query: 101 IAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAK 159
+AVK + A D F EA + + H + L+G C G L+ EYM L +
Sbjct: 38 VAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 97
Query: 160 HLFH----WENQTIEWAMRLR----------------VALYIAEALDYCSSEGRPLYHDL 199
L H + R +A +A + Y S E + ++ DL
Sbjct: 98 FLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS-ERKFVHRDL 156
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIF 253
L EN +++ FGL +N Y + + + PPE + R T ES ++
Sbjct: 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVW 216
Query: 254 SFGTVLLDLLSGKHIPPSHALD------MIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307
++G VL ++ S + P + + +R N+L D N E +++L
Sbjct: 217 AYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNVLSCPD-----NCPLE----LYNLMR 266
Query: 308 RCLQYEPRERPNTKDL 323
C P +RP+ +
Sbjct: 267 LCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 1e-06
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP--- 237
I + LDY SE + ++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 238 -PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296
PE ++ ++ I+S G ++L G+ PP+ + +R +L L+ + +
Sbjct: 169 APEVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMR---VLFLIPKNNPPTLTG 223
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLV 324
E + + CL +P RP K+L+
Sbjct: 224 EFSKPFKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 58/273 (21%), Positives = 122/273 (44%), Gaps = 32/273 (11%)
Query: 77 ESGEKAPNVVY----KGRLQDGNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKR 131
E G+ + +VY KG ++D + R +A+K + A + +F +EA + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCHH 70
Query: 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR--------LRVALYIAE 183
+ L+G G L++ E M L +L + ++ +++A IA+
Sbjct: 71 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD 130
Query: 184 ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN------SRDGKSYSTNLAYTP 237
+ Y ++ + ++ DL A + E+ ++ FG+ ++ R G + +
Sbjct: 131 GMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 189
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297
PE L++G T S ++SFG VL ++ + P +G + ++ +EG +
Sbjct: 190 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-------YQGMSNEQVLRFVMEGGLLDK 242
Query: 298 EAT---VVFDLASRCLQYEPRERPNTKDLVSTL 327
++F+L C QY P+ RP+ +++S++
Sbjct: 243 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 58/269 (21%), Positives = 113/269 (42%), Gaps = 25/269 (9%)
Query: 79 GEKAPNVVYKG-RLQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRLANLI 136
G A VYKG + DG + + +A+K ++ P K+ DEA+ + + + L+
Sbjct: 16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLL 75
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-----IEWAMRLRVALYIAEALDYCSSE 191
G C +L V + MP L ++ +++ + W ++ IA+ + Y E
Sbjct: 76 GICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ------IAKGMSYLE-E 127
Query: 192 GRPLYHDLNAYRVLFDENGDPRLSCFGLMKN-SRDGKSYSTNLAYTPPEYLR-----NGR 245
R ++ DL A VL +++ FGL + D Y + P +++ + R
Sbjct: 128 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRR 187
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305
T +S ++S+G + +L++ P D I + I L++ V+ +
Sbjct: 188 FTHQSDVWSYGVTVWELMTFGAKP----YDGIPAREIPDLLEKGERLPQPPICTIDVYMI 243
Query: 306 ASRCLQYEPRERPNTKDLVSTLAPLQNRP 334
+C + RP ++LV + + P
Sbjct: 244 MVKCWMIDSECRPRFRELVDEFSRMARDP 272
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 29/222 (13%)
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL-RVA-------- 178
+HK + NL+G C ++ EY L ++L +E++ + RV
Sbjct: 79 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKD 138
Query: 179 -----LYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK--NSRDGKSYST 231
+A ++Y +S+ + ++ DL A VL EN +++ FGL + N+ D +T
Sbjct: 139 LVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTT 197
Query: 232 N----LAYTPPEYLRNGRVTPESVIFSFGTVLLDL--LSGKHIPPSHALDMIRGKNILHL 285
N + + PE L + T +S ++SFG ++ ++ L G P ++ + H
Sbjct: 198 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 257
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
MD N ++E ++ + C P RP K LV L
Sbjct: 258 MDK--PANCTNE----LYMMMRDCWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 48/226 (21%), Positives = 85/226 (37%), Gaps = 20/226 (8%)
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
F EA + L H+ L L G ++V E P +L L +
Sbjct: 40 MDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLIST 98
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN- 232
A+ IA + Y S+ R ++ DL A +L + ++ FGLM+ + +
Sbjct: 99 LCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157
Query: 233 ------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM 286
A+ PE LR + S ++ FG L ++ + P + + G IL +
Sbjct: 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG----LSGSQILKKI 213
Query: 287 DSHLE----GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328
D E ++ ++++ +C + P +RP L L
Sbjct: 214 DKEGERLERPEACPQD---IYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 49.0 bits (118), Expect = 2e-06
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 56/226 (24%)
Query: 126 KLRHKRLANLIGYC---CDGDERLLVAEYMPNDTLAKHL---------FHWENQTIEWAM 173
KL H N+I Y + + +V EY L++ + F E Q ++W
Sbjct: 55 KLNHP---NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFP-EEQILDWF- 109
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
+ + AL Y S + L+ D+ + NG +L FG+ K S+ +
Sbjct: 110 -----VQLCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTV 157
Query: 234 AY------TP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL 283
TP PE +N +S I+S G VL +L + KH P G+N+L
Sbjct: 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH--P------FEGENLL 209
Query: 284 HLMDSHLEGNFS------SEEATVVFDLASRCLQYEPRERPNTKDL 323
L L+G + S E + +L S LQ +P ERP+ +
Sbjct: 210 ELALKILKGQYPPIPSQYSSE---LRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 31/234 (13%)
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDER------LLVAEYMPNDTLAKHLFHW---- 164
+ F EA + + H + LIG C E +++ +M + L L +
Sbjct: 45 EDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGD 104
Query: 165 ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224
Q + M ++ IA ++Y SS+ ++ DL A + +EN + ++ FGL K
Sbjct: 105 CPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIY 163
Query: 225 DGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-----PSHA 273
+G Y P E L + T +S ++SFG + ++ + P S
Sbjct: 164 NGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI 223
Query: 274 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
D +R N L L+G ++ L S C P++RP+ + L L
Sbjct: 224 YDYLRQGNRLKQPPDCLDG---------LYSLMSSCWLLNPKDRPSFETLRCEL 268
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 30/267 (11%)
Query: 72 DFIVSES-GEKAPNVVYKGRLQDGNDNRRWIAVKK--FTKHAWPDPKQFADEAWGVGKLR 128
DF + G+ + VV+K + ++R A+K+ +K + ++ DEA + KL
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKA---DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD 57
Query: 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC 188
+ D + +V EY N L K L + + R + I L +
Sbjct: 58 SSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHL 117
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNG 244
S+ + L+ D+ + + D + ++ G+ K D +++ + TP PE +
Sbjct: 118 HSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK 176
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHA-------LDMIRGKNILHLMDSHLEGNFSSE 297
+S +++ G VL + +GKH P A L +IRG + +S +
Sbjct: 177 PYNEKSDVWALGVVLYECCTGKH--PFDANNQGALILKIIRGVF------PPVSQMYSQQ 228
Query: 298 EATVVFDLASRCLQYEPRERPNTKDLV 324
+ L +CL + R+RP+T L+
Sbjct: 229 ----LAQLIDQCLTKDYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 49/215 (22%), Positives = 80/215 (37%), Gaps = 20/215 (9%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE-- 183
+L H L NL D + LV + + L HL + E +V +I E
Sbjct: 56 ELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEE-----QVKFWICEIV 110
Query: 184 -ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---SYSTNLAYTPPE 239
AL+Y S+G ++ D+ +L DE G ++ F + S S Y PE
Sbjct: 111 LALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPE 169
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299
L + +S G + L GK P I ++ + + +
Sbjct: 170 VLCRQGYSVAVDWWSLGVTAYECLRGKR--PYRGHSRTIRDQIRAKQETADV-LYPATWS 226
Query: 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334
T D ++ L+ +P++R L L L+N P
Sbjct: 227 TEAIDAINKLLERDPQKR-----LGDNLKDLKNHP 256
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 142 GDERLLVAEYMPN---DTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPL 195
D LV EY+ +L K L WA + YIAE ++ G +
Sbjct: 69 KDYLYLVMEYLNGGDCASLIKTLGGLPED---WAKQ-----YIAEVVLGVEDLHQRG-II 119
Query: 196 YHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSF 255
+ D+ +L D+ G +L+ FGL +N + K + Y PE + S +S
Sbjct: 120 HRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSL 179
Query: 256 GTVLLDLLSGKHIPPSHA--LDMIRGKNILH-LMDSHLEGN-FSSEEATVVFDLASRCLQ 311
G V+ + L G PP HA D + NIL ++ E F S EA DL +R L
Sbjct: 180 GCVIFEFLFG--YPPFHAETPDAVF-DNILSRRINWPEEVKEFCSPEAV---DLINRLLC 233
Query: 312 YEPRER 317
+P +R
Sbjct: 234 MDPAKR 239
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 21/267 (7%)
Query: 79 GEKAPNVVYKG-RLQDGNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKRLANLI 136
G A VYKG + +G + +A+K + P +F DEA + + H L L+
Sbjct: 16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
G C + LV + MP+ L ++ H I + L + IA+ + Y E R ++
Sbjct: 76 GVCLSPTIQ-LVTQLMPHGCLLDYV-HEHKDNIGSQLLLNWCVQIAKGMMYL-EERRLVH 132
Query: 197 HDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTNLAYTPPEYL-----RNGRVTPES 250
DL A VL +++ FGL + D K Y+ + P +++ + T +S
Sbjct: 133 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 192
Query: 251 VIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD---LAS 307
++S+G + +L++ P D I + I L++ +G + D +
Sbjct: 193 DVWSYGVTIWELMTFGGKP----YDGIPTREIPDLLE---KGERLPQPPICTIDVYMVMV 245
Query: 308 RCLQYEPRERPNTKDLVSTLAPLQNRP 334
+C + RP K+L + + + P
Sbjct: 246 KCWMIDADSRPKFKELAAEFSRMARDP 272
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-06
Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHL-MCDQPDAALR 459
+ + G+ F+ ++ A++ Y + +++ + Y +L +L + + AL
Sbjct: 1 DNAEALKNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALE 59
Query: 460 DAMQA 464
D +A
Sbjct: 60 DLEKA 64
|
Length = 69 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDLNAYR 203
L+ +Y+ L HL+ E+ T V +YIAE ALD+ G +Y D+
Sbjct: 82 LILDYVNGGELFTHLYQREHFTES-----EVRVYIAEIVLALDHLHQLG-IIYRDIKLEN 135
Query: 204 VLFDENGDPRLSCFGLMK-----NSRDGKSYSTNLAYTPPEYLRNGRVTPESVI--FSFG 256
+L D G L+ FGL K S+ + Y PE +R G + + +S G
Sbjct: 136 ILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195
Query: 257 TVLLDLLSG 265
+ +LL+G
Sbjct: 196 VLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 48.2 bits (114), Expect = 5e-06
Identities = 52/247 (21%), Positives = 109/247 (44%), Gaps = 26/247 (10%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+A+K+ P + +E + +L++ + N + GDE +V EY+ +L
Sbjct: 47 VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
+ + A R L +AL++ + + ++ D+ + VL +G +L+ FG
Sbjct: 107 VTETCMDEAQIAAVCRECL---QALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFC 162
Query: 221 KNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM 276
+S + + TP PE + P+ I+S G + ++++ G+ PP +
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENP 220
Query: 277 IRGKNILHLMDSHLEGNFSSEE--ATVVFDLASRCLQYEPRERPNTKDL----------- 323
+R L+L+ ++ + E + + D +RCL+ + +R + K+L
Sbjct: 221 LRA---LYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP 277
Query: 324 VSTLAPL 330
+S+L PL
Sbjct: 278 LSSLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 6e-06
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 23/261 (8%)
Query: 86 VYKGR-LQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VYKG + +G + +A+K + P K+ DEA+ + + H + L+G C
Sbjct: 23 VYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SS 81
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
+ L+ + MP L ++ I L + IA+ + Y E R ++ DL A
Sbjct: 82 QVQLITQLMPLGCLLDYV-RNHKDNIGSQYLLNWCVQIAKGMSYL-EEKRLVHRDLAARN 139
Query: 204 VLFDENGDPRLSCFGLMKN-SRDGKSYSTNLAYTP-----PEYLRNGRVTPESVIFSFGT 257
VL +++ FGL K D K Y P E + + T +S ++S+G
Sbjct: 140 VLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGV 199
Query: 258 VLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE-GNFSSEEATVVFD---LASRCLQYE 313
+ +L++ P + I I LE G + D + +C +
Sbjct: 200 TVWELMTFGAKP----YEGIPAVEIP----DLLEKGERLPQPPICTIDVYMVLVKCWMID 251
Query: 314 PRERPNTKDLVSTLAPLQNRP 334
RP K+L++ + + P
Sbjct: 252 AESRPTFKELINEFSKMARDP 272
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 68/288 (23%), Positives = 112/288 (38%), Gaps = 38/288 (13%)
Query: 68 NFSSDFIVSESGEKAPNVVYKGRL--QDGNDNRRWIAVKKFT-KHAWPDPKQFADEAWGV 124
N S+ + E GE VYKG L + + +A+K K P ++F EA
Sbjct: 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMR 62
Query: 125 GKLRHKRLANLIG-------------YCCDGD-ERLLVAEYMPNDTLAKHLFHWENQTIE 170
+L+H + L+G YC D LV +D + T+E
Sbjct: 63 SRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE 122
Query: 171 WAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS 230
A + + IA +++ SS ++ DL VL + + ++S GL + Y
Sbjct: 123 PADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK 181
Query: 231 T------NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-----PSHALDMIRG 279
+ + PE + G+ + +S I+S+G VL ++ S P ++MIR
Sbjct: 182 LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241
Query: 280 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
+ +L D + V+ L C P RP KD+ S L
Sbjct: 242 RQVLPCPD---------DCPAWVYTLMLECWNEFPSRRPRFKDIHSRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 28/274 (10%)
Query: 74 IVSESGEKAPNVVYKGRLQD---GNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRH 129
++ E G+ + +VY+G +D G R +AVK + A + +F +EA +
Sbjct: 10 LLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLR----VALYI 181
+ L+G G L+V E M + L +L EN L+ +A I
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 182 AEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN------SRDGKSYSTNLAY 235
A+ + Y +++ + ++ DL A + + ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 236 TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH-LMD-SHLEGN 293
PE L++G T S ++SFG VL ++ S P + + +L +MD +L+
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDGGYLDQP 243
Query: 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
+ E V DL C Q+ P+ RP ++V+ L
Sbjct: 244 DNCPER--VTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 54/264 (20%), Positives = 108/264 (40%), Gaps = 44/264 (16%)
Query: 101 IAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTL-- 157
+AVK ++A + + E + ++ H + L G C LL+ EY +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 158 --------------------AKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ +L + + + + + A I+ + Y + E + ++
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA-EMKLVHR 151
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESV 251
DL A VL E ++S FGL ++ + SY + + E L + T +S
Sbjct: 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD 211
Query: 252 IFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306
++SFG +L ++++ G + I P ++++ + M+ N S E +++L
Sbjct: 212 VWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG---YRMER--PENCSEE----MYNLM 262
Query: 307 SRCLQYEPRERPNTKDLVSTLAPL 330
C + EP +RP D+ L +
Sbjct: 263 LTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 17/225 (7%)
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ--TIEWA 172
+ F EA +G+ H + +L G ++V EYM N +L L + Q I+
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109
Query: 173 MRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KSYS 230
LR IA + Y S G ++ DL A +L + N ++S FGL + D +Y+
Sbjct: 110 GMLR---GIASGMKYLSDMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT 165
Query: 231 TN-----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285
T + +T PE + + T S ++S+G V+ +++S P +M ++++
Sbjct: 166 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP---YWEM-SNQDVIKA 221
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330
++ + + L C Q + ERP + +VS L L
Sbjct: 222 IEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 34/263 (12%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGK-----------L 127
G A VYK R ++ N +A+K+ H K + +G L
Sbjct: 9 GSGAFGCVYKVRKKNNGQN--LLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQL 66
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-------HWENQTIEWAMRLRVALY 180
RH + + D +V + + L +H + + I W + +++ L
Sbjct: 67 RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERI-WNIFVQMVL- 124
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN-SRDGK--SYSTNLAYTP 237
AL Y E R ++ DL ++ E+ ++ FGL K + K S + Y+
Sbjct: 125 ---ALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSC 181
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-GKNILHLMDSHLEGNFSS 296
PE ++N ++ +++FG +L + + + PP ++ +M+ I+ + L S
Sbjct: 182 PEIVKNEPYGEKADVWAFGCILYQMCTLQ--PPFYSTNMLSLATKIVEAVYEPLPEGMYS 239
Query: 297 EEATVVFDLASRCLQYEPRERPN 319
E+ T D+ + CL + RP+
Sbjct: 240 EDVT---DVITSCLTPDAEARPD 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 52/210 (24%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL-------MKNSRDGKS 228
++++ + L Y + + ++ D+ +L + G+ +L FG+ M NS G
Sbjct: 103 KISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 162
Query: 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPP----------------- 270
+Y PE L+ T +S I+S G L+++ G++ IPP
Sbjct: 163 -----SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEG 217
Query: 271 ----------SHALDMIRGKNILHLMD-------SHLEGNFSSEEATVVFDLASRCLQYE 313
H D R I L+D L S+E D +CL+
Sbjct: 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDE---FQDFVDKCLKKN 274
Query: 314 PRERPNTKDLVSTLAPLQNRPDVPSYVMLG 343
P+ER + K+L P R ++ G
Sbjct: 275 PKERADLKELTK--HPFIKRAELEEVDFAG 302
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAM 173
+HK + NL+G C ++ EY L ++L + + +
Sbjct: 82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY--ST 231
+ A +A ++Y +S+ + ++ DL A VL E+ +++ FGL ++ Y +T
Sbjct: 142 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200
Query: 232 N----LAYTPPEYLRNGRVTPESVIFSFGTVLLDL--LSGKHIPPSHALDMIRGKNILHL 285
N + + PE L + T +S ++SFG +L ++ L G P ++ + H
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 260
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
MD N ++E ++ + C P +RP K LV L
Sbjct: 261 MDK--PSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 27/255 (10%)
Query: 90 RLQDGNDNRRWIAV-KKFTKHAWPDPK-------QFADEAWGVGKLRHKRLANLIGYCCD 141
+L G W+A K TK A K F EA + L+H +L L
Sbjct: 13 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 72
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
+ ++ E+M +L L E + + IAE + + E R H DL
Sbjct: 73 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRNYIHRDLR 129
Query: 201 AYRVLFDENGDPRLSCFGLMK-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIF 253
A +L + +++ FGL + +R+G + + +T PE + G T +S ++
Sbjct: 130 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVW 187
Query: 254 SFGTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
SFG +L+++++ IP P + ++ ++ ++++ RC +
Sbjct: 188 SFGILLMEIVTYGRIPYPG-----MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKN 242
Query: 313 EPRERPNTKDLVSTL 327
P ERP + + S L
Sbjct: 243 RPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 46/285 (16%)
Query: 74 IVSESGEKAPNVVYKG---RLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRH 129
++ E G+ + +VY+G + G R +A+K ++A + +F +EA + +
Sbjct: 10 LIRELGQGSFGMVYEGLAKGVVKGEPETR-VAIKTVNENASMRERIEFLNEASVMKEFNC 68
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHL-------FHWENQTIEWAMR-LRVALYI 181
+ L+G G L+V E M L +L + + +++A I
Sbjct: 69 HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEI 128
Query: 182 AEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------- 232
A+ + Y ++ + H DL A + E+ ++ FG+ +RD Y T+
Sbjct: 129 ADGMAYLAA--KKFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYRKGGKG 181
Query: 233 ---LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP---PSH--ALDMIRGKNILH 284
+ + PE L++G T +S ++SFG VL ++ + P S+ L + L
Sbjct: 182 LLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLD 241
Query: 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329
L ++ + + +L C QY P+ RP ++VS+L
Sbjct: 242 LPENCPD---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 5e-05
Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 15/230 (6%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+A+K+ P + +E + + ++ + N + GDE +V EY+ +L
Sbjct: 47 VAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 106
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
+ + A R L +ALD+ S + ++ D+ + +L +G +L+ FG
Sbjct: 107 VTETCMDEGQIAAVCRECL---QALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFC 162
Query: 221 KNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM 276
+S + + TP PE + P+ I+S G + ++++ G+ PP +
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENP 220
Query: 277 IRGKNILHLMDSHLEGNFSSEE--ATVVFDLASRCLQYEPRERPNTKDLV 324
+R L+L+ ++ + E + V D +RCL+ + R + K+L+
Sbjct: 221 LRA---LYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 6e-05
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 27/258 (10%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKK--FTKHAWPDPKQFADEAWGVGKLRHKRLANLI 136
GE A VYK D + +A+KK K + + +E + +H + +
Sbjct: 28 GEGASGEVYKAT--DRATGKE-VAIKKMRLRK---QNKELIINEILIMKDCKHPNIVDYY 81
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
GDE +V EYM +L + + E V + + L+Y S+ ++
Sbjct: 82 DSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNE-PQIAYVCREVLQGLEYLHSQNV-IH 139
Query: 197 HDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVI 252
D+ + +L ++G +L+ FG KS ++ TP PE ++ P+ I
Sbjct: 140 RDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDI 199
Query: 253 FSFGTVLLDLLSGK--HI--PPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLAS 307
+S G + +++ G+ ++ PP AL +I K I L + +S E F D +
Sbjct: 200 WSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPE---KWSPE-----FKDFLN 251
Query: 308 RCLQYEPRERPNTKDLVS 325
+CL +P +RP+ ++L+
Sbjct: 252 KCLVKDPEKRPSAEELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 177 VALYIAE---ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KSYS- 230
V Y+AE ALD+ S G +Y DL +L DE G +L+ FGL K S D K+YS
Sbjct: 100 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 231 -TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG 265
+ Y PE + T + +SFG ++ ++L+G
Sbjct: 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209
EYM +L K L + + E + ++A+ + + L Y + + ++ D+ +L +
Sbjct: 79 EYMDGGSLDKILKEVQGRIPERILG-KIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSR 137
Query: 210 GDPRLSCFGLMKNSRD--GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH 267
G +L FG+ + K++ +Y PE ++ + +S I+S G L++L +G+
Sbjct: 138 GQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF 197
Query: 268 -IPPSHALDMIRGKNILHLMDSHLE--------GNFSSEEATVVFDLASRCLQYEPRERP 318
PP + I L+ + G FS + D + CL +PRERP
Sbjct: 198 PYPPENDPPD----GIFELLQYIVNEPPPRLPSGKFSPD----FQDFVNLCLIKDPRERP 249
Query: 319 NTKDL 323
+ K+L
Sbjct: 250 SYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 6e-05
Identities = 59/253 (23%), Positives = 116/253 (45%), Gaps = 20/253 (7%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTK-HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VY G L D + + AVK + + +QF E + H + +L+G C +
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 144 -ERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200
L+V YM + L ++ E N T++ + L +A+ ++Y +S+ + ++ DL
Sbjct: 70 GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGF--GLQVAKGMEYLASK-KFVHRDLA 125
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--------LAYTPPEYLRNGRVTPESVI 252
A + DE+ +++ FGL ++ D + YS + + + E L+ + T +S +
Sbjct: 126 ARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDV 185
Query: 253 FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
+SFG +L +L++ + PP +D L L+ + + ++++ C
Sbjct: 186 WSFGVLLWELMT-RGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDP---LYEVMLSCWHP 241
Query: 313 EPRERPNTKDLVS 325
+P RP +LVS
Sbjct: 242 KPEMRPTFSELVS 254
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 7e-05
Identities = 58/249 (23%), Positives = 94/249 (37%), Gaps = 31/249 (12%)
Query: 107 TKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWEN 166
K+A D F E + +L+ + L+G C D D ++ EYM N L + L
Sbjct: 59 NKNARND---FLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHL 115
Query: 167 Q-----------------TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209
I ++ L VAL IA + Y SS ++ DL L EN
Sbjct: 116 DDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF-VHRDLATRNCLVGEN 174
Query: 210 GDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVLLDLL 263
+++ FG+ +N G Y P E + G+ T S +++FG L ++L
Sbjct: 175 LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234
Query: 264 S-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV---VFDLASRCLQYEPRERPN 319
K P D +N + +++L +C + RERP+
Sbjct: 235 MLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPS 294
Query: 320 TKDLVSTLA 328
D+ + L
Sbjct: 295 FSDIHAFLT 303
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 17/137 (12%)
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIF 253
D+ A +L +E G +L+ FG+ D + + TP PE ++ ++ I+
Sbjct: 124 DIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIW 183
Query: 254 SFGTVLLDLLSGK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASR 308
S G +++ GK I P A+ MI K L D +S E F D +
Sbjct: 184 SLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPE---KWSPE-----FNDFVKK 235
Query: 309 CLQYEPRERPNTKDLVS 325
CL +P ERP+ L+
Sbjct: 236 CLVKDPEERPSAIQLLQ 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 7e-05
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
+ + L+Y EG+ ++ D+ A +L E GD +L+ FG+ S T
Sbjct: 103 ILREVLLGLEYLHEEGK-IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGT 161
Query: 237 P----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH--- 289
P PE ++ ++ I+S G ++L G+ PP L +R +L L+ +
Sbjct: 162 PFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE--PPLSDLHPMR---VLFLIPKNNPP 216
Query: 290 -LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
LEGN S+ D S CL +P+ERP+ K+L
Sbjct: 217 SLEGNKFSKPFK---DFVSLCLNKDPKERPSAKEL 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 7e-05
Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 34/257 (13%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER--LLVAEYMP----N 154
+AVKK + F E + L+H + G C R LV EY+P
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214
D L KH + ++ L A I + ++Y S+ R ++ DL +L + ++
Sbjct: 96 DYLQKH-----RERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKI 149
Query: 215 SCFGLMKNSRDGKSYST-------NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH 267
FGL K K Y + + PE L + + S ++SFG VL +L +
Sbjct: 150 GDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD 209
Query: 268 I---PPSHALDMIRGKN------ILHLMDSHLEGNFSSEE----ATVVFDLASRCLQYEP 314
PP+ + M+ G + + HL++ L+ N ++ + C +P
Sbjct: 210 KSCSPPAEFMRMM-GNDKQGQMIVYHLIEL-LKNNGRLPAPPGCPAEIYAIMKECWNNDP 267
Query: 315 RERPNTKDLVSTLAPLQ 331
+RP+ +L + ++
Sbjct: 268 SQRPSFSELALQVEAIR 284
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 7e-05
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206
+V EYM +LA + I + +A I + LDY ++ ++ D+ +L
Sbjct: 76 IVLEYMDGGSLAD--LLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI 133
Query: 207 DENGDPRLSCFG---LMKNSRDGK-SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 262
+ G+ +++ FG +++N+ D ++ + Y PE ++ + + I+S G LL+
Sbjct: 134 NSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLEC 193
Query: 263 LSGKH--IPPSHA--LDMIRGKNILHLMDS---HLEGNFSSEEATVVFDLASRCLQYEPR 315
GK +PP ++++ + D L S E D S CLQ +P+
Sbjct: 194 ALGKFPFLPPGQPSFFELMQ-----AICDGPPPSLPAEEFSPEFR---DFISACLQKDPK 245
Query: 316 ERPNTKDLVS 325
+RP+ +L+
Sbjct: 246 KRPSAAELLQ 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 7e-05
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--GKSYSTNL 233
+V++ + + L Y + + ++ D+ +L + G+ +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPPSHALDMIRGKNILHLMDSHLEG 292
+Y PE L+ + +S I+S G L+++ G++ IPP A K + + +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPP 352
+ + E + PR RP + L S+ P +RP + + +L +E P
Sbjct: 221 DPAESETS-------------PRPRPPGRPL-SSYGP-DSRPPMAIFELLDYIVNEPPPK 265
Query: 353 TPQHPLSP----------MGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEW 396
P + + R DL Q++V K E E+ F W
Sbjct: 266 LPSGVFGAEFQDFVNKCLIKNPAERADLK---QLMVHAFIKRSE-AEEVDFAGW 315
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 7e-05
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 135 LIGYCCDGDERLLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSS 190
L Y D LV ++ L H+ + E WA + VAL +AL
Sbjct: 50 LHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVAL---DAL---HR 103
Query: 191 EGRPLYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTNLAYTPPEYLRNGRVT 247
EG + DLN +L D+ G +L+ F +++S DG++ Y PE G ++
Sbjct: 104 EG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVEN--MYCAPEV---GGIS 157
Query: 248 PESVI---FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304
E+ +S G +L +LL+GK + H I L++ + + SEEA
Sbjct: 158 EETEACDWWSLGAILFELLTGKTLVECHPSG-INTHTTLNIPE------WVSEEAR---S 207
Query: 305 LASRCLQYEPRER 317
L + LQ+ P ER
Sbjct: 208 LLQQLLQFNPTER 220
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-05
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDL 199
D LV M L H++H E R Y AE L+ E R +Y DL
Sbjct: 73 DALCLVLTLMNGGDLKFHIYHMGEAGFEEG---RAVFYAAEICCGLEDLHQE-RIVYRDL 128
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFG 256
+L D++G R+S GL + +G K + Y PE ++N R T ++ G
Sbjct: 129 KPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 188
Query: 257 TVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRE 316
+L ++++G+ P I+ + + L+ ++ +S + + L L +P+E
Sbjct: 189 CLLYEMIAGQS-PFQQRKKKIKREEVERLV-KEVQEEYSEKFSPDARSLCKMLLCKDPKE 246
Query: 317 R 317
R
Sbjct: 247 R 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 9e-05
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 34/213 (15%)
Query: 134 NLIGYCCD---GDERLLVAEYMPNDTLA---KHLFHW---ENQTIEWAMRLRVALYIAEA 184
N++ Y GDE LV Y+ +L K + + I A L+ L +
Sbjct: 60 NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAII--ATVLKEVL---KG 114
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG----LMKNSRDGKSYSTNLAYTP--- 237
L+Y S G+ ++ D+ A +L E+G +++ FG L + TP
Sbjct: 115 LEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWM 173
Query: 238 -PEYLRNGRVTPESV-IFSFGTVLLDLLSGK----HIPPSHALDMIRGKNILHLMDSHLE 291
PE + I+SFG ++L +G PP L + + LE
Sbjct: 174 APEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND-----PPSLE 228
Query: 292 GNFSSEEATVVF-DLASRCLQYEPRERPNTKDL 323
++ + F + S CLQ +P +RP ++L
Sbjct: 229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 176 RVALYIAEA----LDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL---MKNSRDGK 227
+V IAE+ L Y S R + H D+ +L G +L FG+ + NS G
Sbjct: 105 KVLGKIAESVLKGLSYLHS--RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGT 162
Query: 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK---------HIPPSHALDMIR 278
T+ Y PE ++ + S ++S G LL++ + + P L I
Sbjct: 163 FTGTSF-YMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV 221
Query: 279 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 325
L D G SEE D +CL+ +P RP D++
Sbjct: 222 NMPNPELKDEPGNGIKWSEEFK---DFIKQCLEKDPTRRPTPWDMLE 265
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|215568 PLN03088, PLN03088, SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALR 459
M LE + + AF + +F AVD Y+Q ID+ + +YA R+ ++ A+
Sbjct: 1 MAKDLEDKAKE--AFVDDDFALAVDLYTQAIDLDP-NNAELYADRAQANIKLGNFTEAVA 57
Query: 460 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
DA +A + P + A+ + A KL+ ++ A L++ ASL
Sbjct: 58 DANKAIELDPSLAKAYLRKGTACMKLEEYQTAKAALEKGASLA 100
|
Length = 356 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 67/305 (21%), Positives = 97/305 (31%), Gaps = 107/305 (35%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWG-----------VGKLRHKRLAN 134
VYK R + +A+KK +E G + KLRH +
Sbjct: 15 VYKAR--NKKTGEL-VALKKIRME---------NEKEGFPITAIREIKLLQKLRHPNIVR 62
Query: 135 LIGYC--CDGDERLLVAEYMPND------------TLA--KHLFHWENQTIEWAMRLRVA 178
L +V EYM +D T + K Q
Sbjct: 63 LKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK---Q----------- 108
Query: 179 LYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK--NSRDGKSYSTN---- 232
+ E L Y S G L+ D+ +L + +G +L+ FGL + R+ Y TN
Sbjct: 109 --LLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-TNRVIT 164
Query: 233 LAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPP----SHALDMIRGKNILHLM 286
L Y PPE L G R PE ++S G +L +L GK I L+ I L
Sbjct: 165 LWYRPPELLL-GATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEK-----IFELC 218
Query: 287 ----------DSHL-------------------EGNFSSEEATVVFDLASRCLQYEPRER 317
S L + A DL + L +P++R
Sbjct: 219 GSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSA---LDLLDKLLTLDPKKR 275
Query: 318 PNTKD 322
+
Sbjct: 276 ISADQ 280
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 2e-04
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKN-----SRD-GKSYSTNLAYTPPEYLRNGRVTP 248
++ D+ + +L NG +L FG K S D G+++ Y PE R +
Sbjct: 165 IHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSK 224
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF-------SSEEATV 301
++ +FS G +L +LL+ K D G+N+ +M L G + S E +
Sbjct: 225 KADMFSLGVLLYELLTLK-----RPFD---GENMEEVMHKTLAGRYDPLPPSISPEMQEI 276
Query: 302 VFDLASRCLQYEPRERPNTKDLVST 326
V L L +P+ RP++ L++
Sbjct: 277 VTAL----LSSDPKRRPSSSKLLNM 297
|
Length = 496 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 28/242 (11%)
Query: 101 IAVKKF----TKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156
+AVK TK A D F E + +L++ + L+G C D ++ EYM N
Sbjct: 47 VAVKMLRADVTKTARND---FLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGD 103
Query: 157 LAKHLFHWENQT----------IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206
L + L E ++ + A L +A+ IA + Y +S ++ DL L
Sbjct: 104 LNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF-VHRDLATRNCLV 162
Query: 207 DENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVLL 260
+ +++ FG+ +N G Y P E + G+ T S +++FG L
Sbjct: 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLW 222
Query: 261 DLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE---ATVVFDLASRCLQYEPRE 316
++ + K P S D +N + + S+ + VF L RC + ++
Sbjct: 223 EMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKD 282
Query: 317 RP 318
RP
Sbjct: 283 RP 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR------------- 174
+HK + NL+G C ++ EY L + L ++
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 175 -LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY--ST 231
+ A +A ++Y S R ++ DL A VL E+ +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 232 N----LAYTPPEYLRNGRVTPESVIFSFGTVLLDL--LSGKHIPPSHALDMIRGKNILHL 285
N + + PE L + T +S ++SFG ++ ++ L G P ++ + H
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254
Query: 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
MD N + E ++ L C P +RP K LV L
Sbjct: 255 MDK--PSNCTHE----LYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 70/277 (25%), Positives = 114/277 (41%), Gaps = 43/277 (15%)
Query: 79 GEKAPNVVYKGRL-QDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKL-RHKRLANL 135
GE V K R+ +DG R A+K+ ++A D + FA E + KL H + NL
Sbjct: 16 GEGNFGQVLKARIKKDGL--RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 73
Query: 136 IGYCCDGDERLLVAEYMPNDTL--------------AKHLFHWENQTIEWAMRLRVALYI 181
+G C L EY P+ L A + + T+ L A +
Sbjct: 74 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 133
Query: 182 AEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP--- 238
A +DY S + + ++ DL A +L EN +++ FGL SR + Y P
Sbjct: 134 ARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRW 189
Query: 239 ---EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS-----HL 290
E L T S ++S+G +L +++S P G L + L
Sbjct: 190 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-------GMTCAELYEKLPQGYRL 242
Query: 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
E + ++ V+DL +C + +P ERP+ ++ +L
Sbjct: 243 EKPLNCDDE--VYDLMRQCWREKPYERPSFAQILVSL 277
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 45/157 (28%), Positives = 62/157 (39%), Gaps = 35/157 (22%)
Query: 180 YIA---EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
YIA A +Y + G +Y DL +L D NG +L FG K K S +T
Sbjct: 98 YIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAK-----KLKSGQKTWT 151
Query: 237 ---PPEYLRNGRVTPESV----------IFSFGTVLLDLLSGKHIPP---SHALDMIRGK 280
PEY V PE + +S G +L +LL+G+ PP M
Sbjct: 152 FCGTPEY-----VAPEIILNKGYDFSVDYWSLGILLYELLTGR--PPFGEDDEDPMEIYN 204
Query: 281 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRER 317
+IL N+ + A DL + L+ P ER
Sbjct: 205 DILKGNGKLEFPNYIDKAAK---DLIKQLLRRNPEER 238
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 3e-04
Identities = 73/292 (25%), Positives = 118/292 (40%), Gaps = 57/292 (19%)
Query: 66 TNNFSSDFIVSESGE-KAPNVVYKGRLQDGNDNRRWI-AVKKFTKHAWPDPKQ------F 117
TN + V GE + + + L +GN+N R + V K DP F
Sbjct: 9 TNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVL-----DPSHRDIALAF 63
Query: 118 ADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM---PNDTLAKHLFHWENQTIEWAMR 174
+ A + ++ H LA + G C G E ++V E++ P D + E + A +
Sbjct: 64 FETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK----EKGRVPVAWK 119
Query: 175 LRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENG------------DPRLSCFGLMK 221
+ VA +A AL Y E + L H ++ A +L G DP +S L +
Sbjct: 120 ITVAQQLASALSYL--EDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR 177
Query: 222 NSRDGKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIP-----PSHALD 275
R + + + PE + G ++ + +SFGT LL++ +P PS
Sbjct: 178 EERVER-----IPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--- 229
Query: 276 MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
K + L E AT L S+CL YEP +RP+ + ++ L
Sbjct: 230 ----KERFYEKKHRLPEPSCKELAT----LISQCLTYEPTQRPSFRTILRDL 273
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN 232
++A+ + E L Y + R ++ D+ +L + G +L FG+ + NS T+
Sbjct: 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS 166
Query: 233 LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK----NILHLMDS 288
Y PE ++ G+ T +S ++S G +++L GK P + + G+ IL L+
Sbjct: 167 -TYMSPERIQGGKYTVKSDVWSLGISIIELALGK-FPFAFSNIDDDGQDDPMGILDLLQQ 224
Query: 289 HL--------EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326
+ +F + D CL +P ERP + L +
Sbjct: 225 IVQEPPPRLPSSDFPE----DLRDFVDACLLKDPTERPTPQQLCAM 266
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 18/210 (8%)
Query: 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC 188
H+ + NL+G C G L++ EY L L + L + +A+ + +
Sbjct: 98 HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL 157
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY----STNL--AYTPPEYLR 242
+S+ ++ DL A VL ++ FGL ++ + +Y + L + PE +
Sbjct: 158 ASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF 216
Query: 243 NGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDS---HLEGNFSSEE 298
N T ES ++S+G +L ++ S G + P M L+ + + E
Sbjct: 217 NCVYTFESDVWSYGILLWEIFSLGSNPYP----GMPVDSKFYKLIKEGYRMAQPEHAPAE 272
Query: 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLA 328
++D+ C +P +RP K +V +
Sbjct: 273 ---IYDIMKTCWDADPLKRPTFKQIVQLIG 299
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 4e-04
Identities = 61/267 (22%), Positives = 115/267 (43%), Gaps = 21/267 (7%)
Query: 79 GEKAPNVVYKGR-LQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRLANLI 136
G A VYKG + +G + +A+K+ + P K+ DEA+ + + + + L+
Sbjct: 16 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 75
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGRPL 195
G C + L+ + MP L ++ H +N ++ + V IA+ ++Y E R L
Sbjct: 76 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--IAKGMNYL--EERRL 130
Query: 196 YH-DLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTNLAYTPPEYLRNGRV-----TP 248
H DL A VL +++ FGL K D K Y P +++ + T
Sbjct: 131 VHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTH 190
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV-VFDLAS 307
+S ++S+G + +L++ P D I I +++ E T+ V+ +
Sbjct: 191 QSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKG-ERLPQPPICTIDVYMIMV 245
Query: 308 RCLQYEPRERPNTKDLVSTLAPLQNRP 334
+C + RP ++L+ + + P
Sbjct: 246 KCWMIDADSRPKFRELIIEFSKMARDP 272
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 30/248 (12%)
Query: 95 NDNRRWIAVK--KFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152
D +AVK + + K+ ADE + L+H L G ++ + EY
Sbjct: 22 LDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81
Query: 153 PNDTLAKHLFHWENQTIEWAMRLRV-ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211
TL + L E+ I +RV L + E L Y S G ++ D+ + D NG
Sbjct: 82 SGGTLEELL---EHGRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGV 137
Query: 212 PRLSCFG----LMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPE--SV-IFSFGTVLL 260
+L FG L N+ +LA TP PE + G+ + I+S G V+L
Sbjct: 138 IKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVL 197
Query: 261 DLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF-----SSEEATVVFDLASRCLQYEPR 315
++ +GK P LD N +M G+ S + + D RCL+ +P+
Sbjct: 198 EMATGK--RPWSELD-----NEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPK 250
Query: 316 ERPNTKDL 323
+RP +L
Sbjct: 251 KRPTASEL 258
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 6e-04
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 99 RWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLA 158
+ +AVKK + +E + +H+ + + GDE +V E++ L
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 159 KHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218
+ H + A V L + +AL ++G ++ D+ + +L +G +LS FG
Sbjct: 106 DIVTHTRMNEEQIAA---VCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFG 161
Query: 219 LMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGK----HIPP 270
+L TP PE + PE I+S G ++++++ G+ + PP
Sbjct: 162 FCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 221
Query: 271 SHALDMIR 278
A+ MIR
Sbjct: 222 LKAMKMIR 229
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 40/266 (15%)
Query: 92 QDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149
+DG + A+K + A D + FA E + KL H + NL+G C + +
Sbjct: 25 KDGL--KMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82
Query: 150 EYMPNDTLAKHLF--------------HWENQTIEWAMRLRVALYIAEALDYCSSEGRPL 195
EY P L L H T+ L+ A +A + Y S E + +
Sbjct: 83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS-EKQFI 141
Query: 196 YHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EYLRNGRVTPE 249
+ DL A VL EN +++ FGL SR + Y P E L T +
Sbjct: 142 HRDLAARNVLVGENLASKIADFGL---SRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTK 198
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT----VVFDL 305
S ++SFG +L +++S P G L + +G + E+ V++L
Sbjct: 199 SDVWSFGVLLWEIVSLGGTPYC-------GMTCAELYEKLPQG-YRMEKPRNCDDEVYEL 250
Query: 306 ASRCLQYEPRERPNTKDLVSTLAPLQ 331
+C + P ERP + L+ +
Sbjct: 251 MRQCWRDRPYERPPFAQISVQLSRML 276
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 8e-04
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRV-ALYIAEALDYCSSEGRPLYHDLNA 201
D V EY L FH + + R R I ALDY SE +Y DL
Sbjct: 68 DRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 124
Query: 202 YRVLFDENGDPRLSCFGLMKNS-RDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGT 257
++ D++G +++ FGL K +DG K++ Y PE L + + G
Sbjct: 125 ENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 184
Query: 258 VLLDLLSGK 266
V+ +++ G+
Sbjct: 185 VMYEMMCGR 193
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 8e-04
Identities = 67/297 (22%), Positives = 112/297 (37%), Gaps = 35/297 (11%)
Query: 50 GAPAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH 109
G F E L + DF + SG + V K +D N N R
Sbjct: 14 GEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNAR---------- 63
Query: 110 AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-- 167
F E + +L+ + L+ C D ++ EYM N L + L E Q
Sbjct: 64 -----NDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEA 118
Query: 168 -------TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
TI ++ + +A IA + Y SS ++ DL L +N +++ FG+
Sbjct: 119 AEKADVVTISYSTLIFMATQIASGMKYLSSLNF-VHRDLATRNCLVGKNYTIKIADFGMS 177
Query: 221 KNSRDGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHA 273
+N G Y P E + G+ T S +++FG L ++L+ K P S
Sbjct: 178 RNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237
Query: 274 LDMIRGKNILHLMDSHLEGNFSSEEATV---VFDLASRCLQYEPRERPNTKDLVSTL 327
D +N + + A ++ L C + +ERP+ +++ +TL
Sbjct: 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATL 294
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 9e-04
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR 174
KQ E + KL+H + +G + D + E +P +LAK L + +
Sbjct: 47 KQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEP---- 102
Query: 175 LRVALY---IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS---RDGKS 228
+ LY I L+Y ++ D+ +L D NG +L+ FG+ K KS
Sbjct: 103 -VIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160
Query: 229 YSTNLAYTPPEYL-RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287
+ + + PE + + G + I+S G +L++ +GK PP L+ + + +
Sbjct: 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAA--VFKIGR 216
Query: 288 S--------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
S HL S+EA D +CLQ +P RP +L
Sbjct: 217 SKELPPIPDHL-----SDEAK---DFILKCLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 9e-04
Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 12/177 (6%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206
LV M L H+++ A + A I L++ R +Y DL VL
Sbjct: 70 LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLL 128
Query: 207 DENGDPRLSCFGL---MKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLL 263
D++G+ R+S GL +K + K + Y PE L+ F+ G L +++
Sbjct: 129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188
Query: 264 SGKHIPPSHALDMIRGKNILHL---MDSHLEGNFSSEEATVVFDLASRCLQYEPRER 317
+G P + + + + M FS E DL LQ +P +R
Sbjct: 189 AG-RSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAK----DLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEAL 185
+L H + ++G C+ L E+M +++ HL + + A+ + + L
Sbjct: 59 RLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLLS-KYGAFKEAVIINYTEQLLRGL 116
Query: 186 DYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLM-----KNSRDGK---SYSTNLAYT 236
Y E + ++ D+ +L D G R++ FG K + G+ +A+
Sbjct: 117 SYLH-ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFM 175
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296
PE LR + ++S G V++++ + K PP +A +HL F
Sbjct: 176 APEVLRGEQYGRSCDVWSVGCVIIEMATAK--PPWNA----------EKHSNHLALIFKI 223
Query: 297 EEATV-----------VFDLASRCLQYEPRERPNTKDLV 324
AT + D+ RCL+ +P +RP +++L+
Sbjct: 224 ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 30/218 (13%)
Query: 126 KLRHKRLANLIGYC---CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA 182
L+H N+I Y D + L+ EY TL + + Q E M L I
Sbjct: 55 LLQH---PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIV 111
Query: 183 EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----P 238
A+ Y G L+ D+ + + G +L FG+ K S + + TP P
Sbjct: 112 SAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSP 170
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN----- 293
E + + +S I++ G VL +LL+ K N L+L+ ++GN
Sbjct: 171 ELCQGVKYNFKSDIWALGCVLYELLTLKRT--------FDATNPLNLVVKIVQGNYTPVV 222
Query: 294 --FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329
+SSE ++V LQ +P +RP +++
Sbjct: 223 SVYSSELISLVHS----LLQQDPEKRPTADEVLDQPLL 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDL 199
D LV M L H+++ N + R Y AE L+ E R +Y DL
Sbjct: 73 DALCLVLTLMNGGDLKFHIYNMGNPGFDEE---RAVFYAAEITCGLEDLHRE-RIVYRDL 128
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFG 256
+L D+ G R+S GL +G + + Y PE ++N R T + G
Sbjct: 129 KPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLG 188
Query: 257 TVLLDLLSGK 266
++ +++ GK
Sbjct: 189 CLIYEMIEGK 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 36/242 (14%)
Query: 102 AVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMPNDTLAK 159
A+K+ ++A D + FA E + KL H + NL+G C L EY P+ L
Sbjct: 26 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 85
Query: 160 HLF--------------HWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205
L + T+ L A +A +DY S + + ++ DL A +L
Sbjct: 86 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS-QKQFIHRDLAARNIL 144
Query: 206 FDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVL 259
EN +++ FGL SR + Y P E L T S ++S+G +L
Sbjct: 145 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 201
Query: 260 LDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV---VFDLASRCLQYEPRE 316
+++S P G L + +G + V+DL +C + +P E
Sbjct: 202 WEIVSLGGTPYC-------GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYE 254
Query: 317 RP 318
RP
Sbjct: 255 RP 256
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--GKSYSTNL 233
+V++ + L Y + + ++ D+ +L + G+ +L FG+ D S+
Sbjct: 107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPPSHA--LDMIRGKNIL 283
+Y PE L+ + +S I+S G L++L G++ IPP A L+ I G+ ++
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVV 219
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 49/230 (21%), Positives = 104/230 (45%), Gaps = 15/230 (6%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+A+K+ P + +E + + +H + N + GDE +V EY+ +L
Sbjct: 47 VAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 106
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
+ + A R L +AL++ S ++ D+ + +L +G +L+ FG
Sbjct: 107 VTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFC 162
Query: 221 KNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM 276
+S + + TP PE + P+ I+S G + ++++ G+ PP +
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENP 220
Query: 277 IRGKNILHLMDSHLEGNFSS-EEATVVF-DLASRCLQYEPRERPNTKDLV 324
+R L+L+ ++ + E+ + +F D +RCL+ + +R + K+L+
Sbjct: 221 LRA---LYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 138 YCC--DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALYIAE---ALDYCS 189
YCC D V E++ L +FH I+ + R R Y AE AL +
Sbjct: 62 YCCFQTPDRLFFVMEFVNGGDL---MFH-----IQKSRRFDEARARFYAAEITSALMFLH 113
Query: 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS-RDGKSYSTNLA---YTPPEYLRNGR 245
+G +Y DL VL D G +L+ FG+ K +GK+ ST Y PE L+
Sbjct: 114 DKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEML 172
Query: 246 VTPESVIFSFGTVLLDLLSGKHIP 269
P ++ G +L ++L G H P
Sbjct: 173 YGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 28/203 (13%)
Query: 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214
D K ++ + TI + ++A+ I +AL+Y S+ ++ D+ VL + NG +L
Sbjct: 87 DKFYKKVYD-KGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKL 145
Query: 215 SCFGLMKNSRDGKSYSTNLA---YTPPEYLRNGRVTPE---------SVIFSFGTVLLDL 262
FG+ D + + + Y PE R+ PE S ++S G +++L
Sbjct: 146 CDFGISGYLVDSVAKTIDAGCKPYMAPE-----RINPELNQKGYDVKSDVWSLGITMIEL 200
Query: 263 LSGKHIPPSHALDMIRGKNILHLMDSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTK 321
+G+ S + K ++ L FS E D ++CL+ +ERPN
Sbjct: 201 ATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPE----FQDFVNKCLKKNYKERPNYP 256
Query: 322 DLV----STLAPLQNRPDVPSYV 340
+L+ L L DV S+V
Sbjct: 257 ELLQHPFFELH-LSKNTDVASFV 278
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 44/247 (17%)
Query: 127 LRHKRLANLIGYC----CDGDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALY 180
L+H R N+I ++ V E + D L + L E Q I++ +
Sbjct: 63 LKHLRHENIISLSDIFISPLEDIYFVTELLGTD-LHRLLTSRPLEKQFIQYFL-----YQ 116
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTNLAYTPPE 239
I L Y S G ++ DL +L +EN D ++ FGL + Y + Y PE
Sbjct: 117 ILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPE 175
Query: 240 YLRNGRVTPESV-IFSFGTVLLDLLSGK-------HI------------PPSHALDMIRG 279
+ + V I+S G + ++L GK H+ PP ++ I
Sbjct: 176 IMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235
Query: 280 KNILHLMDS-------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST--LAPL 330
+N L + S F + + + + DL + L ++P++R + + ++ LAP
Sbjct: 236 ENTLRFVQSLPKREPVPFSEKFKNADPSAI-DLLEKMLVFDPQKRISAAEALAHPYLAPY 294
Query: 331 QNRPDVP 337
+ D P
Sbjct: 295 HDPTDEP 301
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 45/207 (21%), Positives = 76/207 (36%), Gaps = 46/207 (22%)
Query: 143 DERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYH- 197
+E L V EY PN L +++ + + + Y AE AL+Y S+G + H
Sbjct: 74 EENLYFVLEYAPNGELLQYIRKYGSLDEKCTR-----FYAAEILLALEYLHSKG--IIHR 126
Query: 198 DLNAYRVLFDENGDPRLSCFG--------LMKNSRDGKSYSTNLA--------------- 234
DL +L D++ +++ FG S G + + +
Sbjct: 127 DLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA 186
Query: 235 -YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD--SHLE 291
Y PE L S +++ G ++ +L+GK RG N LE
Sbjct: 187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKP--------PFRGSNEYLTFQKILKLE 238
Query: 292 GNFSSEEATVVFDLASRCLQYEPRERP 318
+F DL + L +P++R
Sbjct: 239 YSFPPNFPPDAKDLIEKLLVLDPQDRL 265
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP 237
A IA AL Y S +Y DL +L D G L+ FGL K + ++ TP
Sbjct: 102 AAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP 160
Query: 238 ----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-KNILH 284
PE LR + G VL ++L G +PP ++ D NIL+
Sbjct: 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRDTAEMYDNILN 210
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 176 RVALYIAE---ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN 232
R Y AE L + S+G +Y DL V+ D +G +++ FG+ K + G + ++
Sbjct: 97 RATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155
Query: 233 LAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD 275
TP PE L+ + T +SFG +L ++L G+ P H D
Sbjct: 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDL 199
D LV M L H+++ N E R Y AE L+ E +Y DL
Sbjct: 73 DALCLVLTIMNGGDLKFHIYNMGNPGFE---EERALFYAAEILCGLEDLHREN-TVYRDL 128
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYS---TNLAYTPPEYLRNGRVTPESVIFSFG 256
+L D+ G R+S GL +G+S + Y PE L N R T + G
Sbjct: 129 KPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLG 188
Query: 257 TVLLDLLSGK 266
++ +++ G+
Sbjct: 189 CLIYEMIEGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NLAYTPPEYLRNGRVTPESV- 251
+Y DL +L DE+G R+S GL + K +++ Y PE L+ G S
Sbjct: 119 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSAD 178
Query: 252 IFSFGTVLLDLLSGKHIP--PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308
FS G +L LL G H P D + M L +FS E +++ L R
Sbjct: 179 WFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 236
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.002
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 193 RPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTP 248
R +Y DL VL D +G+ R+S GL +DG+S + A TP PE L+
Sbjct: 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF 176
Query: 249 ESVIFSFGTVLLDLLSGK 266
F+ G L ++++ +
Sbjct: 177 SVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 138 YCCDGDERLLVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
YC D + E TL+ ENQ EW ++L + + Y + R L+
Sbjct: 83 YCEGRDLDCKLEELKHTGKTLS------ENQVCEWFIQLLL------GVHYM-HQRRILH 129
Query: 197 HDLNAYRVLFDEN----GDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVI 252
DL A + N GD +S LM + +++ Y PE L++ +S I
Sbjct: 130 RDLKAKNIFLKNNLLKIGDFGVSRL-LMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDI 188
Query: 253 FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS---RC 309
+S G +L ++ H G+N L ++ +EG S T L S
Sbjct: 189 WSLGCILYEMCCLAH--------AFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSM 240
Query: 310 LQYEPRERPNTKDLV 324
L +P RP+ +++
Sbjct: 241 LNKDPSLRPSAAEIL 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 33/235 (14%)
Query: 106 FTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH----- 160
TK + + E + K++H + + +V EY L K
Sbjct: 35 LTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQR 94
Query: 161 --LFHWENQTIEWAMRLRVAL-YIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-PRLSC 216
LF E+Q + W +++ + L +I + + L+ D+ + + +NG +L
Sbjct: 95 GVLFS-EDQILSWFVQISLGLKHIHDR--------KILHRDIKSQNIFLSKNGMVAKLGD 145
Query: 217 FGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH 272
FG+ + D + TP PE +N ++ I+S G VL +L + KH P
Sbjct: 146 FGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKH-P--- 201
Query: 273 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA---SRCLQYEPRERPNTKDLV 324
G N+ L+ +G F+ DL S+ + PR+RP+ ++
Sbjct: 202 ----FEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSIL 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.003
Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 16/224 (7%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-------HWENQTI 169
F E KL HK + L+G C + + ++ EY L + L + +
Sbjct: 55 FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114
Query: 170 EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY 229
++ + IA +D+ S+ R ++ DL A L + ++S L K+ + + Y
Sbjct: 115 STKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173
Query: 230 STN-----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH 284
L + PE ++ + +S ++SFG ++ ++ + +P + + +
Sbjct: 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNR 230
Query: 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328
L LE + ++ L +RC P++RP+ +LVS L
Sbjct: 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 52/285 (18%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD----EAWGVGKLRHKRLAN 134
GE + +V K + ++ + +A+KKF + D K E + +LRH+ L N
Sbjct: 10 GEGSYGMVMKCKHKETG---QIVAIKKFLES--EDDKMVKKIAMREIRMLKQLRHENLVN 64
Query: 135 LIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY-IAEALDYCSSEGR 193
LI LV E++ + T+ L + N E R+R L+ I +++C S
Sbjct: 65 LIEVFRRKKRLYLVFEFVDH-TVLDDLEKYPNGLDE--SRVRKYLFQILRGIEFCHSHN- 120
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKN-SRDGKSYSTNLA---YTPPEYL----RNGR 245
++ D+ +L ++G +L FG + + G+ Y+ +A Y PE L + GR
Sbjct: 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGR 180
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHA-LDMI------------RGKNILH-------- 284
I++ G ++ ++L+G+ + P + +D + R + I
Sbjct: 181 AVD---IWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237
Query: 285 -LMDSH----LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 324
L + LE F +V DLA +CL+ +P +RP++ L+
Sbjct: 238 RLPEVKEIEPLEKRFPKLSG-LVLDLAKQCLRIDPDDRPSSSQLL 281
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDLNAY 202
V EY+ L H+ Q+ R Y AE L + S+G +Y DL
Sbjct: 72 FFVMEYLNGGDLMFHI-----QSCHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLD 125
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTV 258
+L D +G +++ FG+ K + G + + TP PE L + +SFG +
Sbjct: 126 NILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVL 185
Query: 259 LLDLLSGKHIPPSHALD 275
L ++L G+ P H D
Sbjct: 186 LYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.003
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 128 RHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRV-ALYIAEAL 185
RH L +L Y +RL V EY+ L FH + + R R I AL
Sbjct: 53 RHPFLTSL-KYSFQTKDRLCFVMEYVNGGEL---FFHLSRERVFSEDRTRFYGAEIVSAL 108
Query: 186 DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK----NSRDGKSYSTNLAYTPPEYL 241
DY S G+ +Y DL ++ D++G +++ FGL K ++ K++ Y PE L
Sbjct: 109 DYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVL 167
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGK 266
+ + G V+ +++ G+
Sbjct: 168 EDNDYGRAVDWWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 35/258 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
+VY R + IA+K+ + + +E L+H+ + +G +
Sbjct: 23 IVYAAR---DLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF 79
Query: 145 RLLVAEYMPNDTLAKHL------FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHD 198
+ E +P +L+ L QTI + + I E L Y + + ++ D
Sbjct: 80 FKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTK-----QILEGLKYLH-DNQIVHRD 133
Query: 199 LNAYRVLFDE-NGDPRLSCFGLMKN----SRDGKSYSTNLAYTPPEYLRNGR--VTPESV 251
+ VL + +G ++S FG K + ++++ L Y PE + G +
Sbjct: 134 IKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPAD 193
Query: 252 IFSFGTVLLDLLSGKHIPPSHALD-----MIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306
I+S G ++++ +GK PP L M + + + H E S F L
Sbjct: 194 IWSLGCTIVEMATGK--PPFIELGEPQAAMFK----VGMFKIHPEIPESLSAEAKNFIL- 246
Query: 307 SRCLQYEPRERPNTKDLV 324
RC + +P +R + DL+
Sbjct: 247 -RCFEPDPDKRASAHDLL 263
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.6 bits (91), Expect = 0.004
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 49/234 (20%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA--- 182
+L+H + L+ + LV EY D L K+L + + + + I
Sbjct: 54 ELKHPNIVKLLDVIHTERKLYLVFEYCDMD-LKKYL---DKRPG--PLSPNLIKSIMYQL 107
Query: 183 -EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----DGKSYSTN---LA 234
L YC S R L+ DL +L + +G +L+ FGL +R ++Y+ L
Sbjct: 108 LRGLAYCHS-HRILHRDLKPQNILINRDGVLKLADFGL---ARAFGIPLRTYTHEVVTLW 163
Query: 235 YTPPEYLRNGRVTPESV-IFSFGTVLLDLLSGKHIPP--SHALDMI-------------- 277
Y PE L + +V I+S G + ++++GK + P S +D +
Sbjct: 164 YRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE-IDQLFKIFQILGTPTEES 222
Query: 278 -----RGKNILHLMDSH----LEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 322
+ + LE + + DL S+ LQY P +R + K+
Sbjct: 223 WPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGI-DLLSKMLQYNPAKRISAKE 275
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 19/157 (12%)
Query: 119 DEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-----IEWAM 173
D +G L H + L+G C G LV + P +L H+ + + W +
Sbjct: 58 DHMLAMGSLDHAYIVRLLG-ICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCV 116
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTN 232
++ +Y E E R ++ +L A +L + +++ FG+ D K Y +
Sbjct: 117 QIAKGMYYLE-------EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYS 169
Query: 233 LAYTPP-----EYLRNGRVTPESVIFSFGTVLLDLLS 264
TP E + GR T +S ++S+G + +++S
Sbjct: 170 EHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 45/271 (16%)
Query: 86 VYKGRLQDGNDNRRWIAVK--KFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V + +L+ + + + +AVK K + D ++F EA + + H + LIG
Sbjct: 15 VREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSR 74
Query: 144 ER------LLVAEYMPNDTLAKHL---------FHWENQTIEWAMRLRVALYIAEALDYC 188
+ +++ +M + L L F QT+ +R + IA ++Y
Sbjct: 75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTL-----VRFMIDIASGMEYL 129
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EYLR 242
SS+ ++ DL A + +EN ++ FGL K G Y A P E L
Sbjct: 130 SSKNF-IHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLA 188
Query: 243 NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD------MIRGKNILHLMDSHLEGNFSS 296
+ T S +++FG + ++++ P + + +I+G + D +
Sbjct: 189 DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLED----- 243
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
V++L +C EP+ RP+ + L L
Sbjct: 244 -----VYELMCQCWSPEPKCRPSFQHLRDQL 269
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 37/117 (31%), Positives = 48/117 (41%), Gaps = 11/117 (9%)
Query: 176 RVALYIAE---ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN 232
R Y AE AL Y S +Y DL +L D G L+ FGL K +T
Sbjct: 97 RARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT 155
Query: 233 LAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-KNILH 284
TP PE +R + G VL ++L G +PP + D+ NILH
Sbjct: 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG--LPPFYCRDVAEMYDNILH 210
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 512 | |||
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.98 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.98 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.98 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.97 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.96 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.93 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.91 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.88 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.86 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.86 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.84 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.84 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.84 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.83 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.82 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.82 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.81 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.8 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.8 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.79 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.78 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.76 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.75 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.72 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.71 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.71 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.69 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.65 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.6 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.59 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.59 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.59 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.57 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.57 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.56 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.55 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.53 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.52 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.5 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.49 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.49 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.48 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.47 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.43 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.43 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.42 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.41 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.41 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.41 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.41 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.39 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.37 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.35 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.34 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.33 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.33 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.32 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.32 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.31 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.31 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.3 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.29 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.28 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.28 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.27 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.26 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.26 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.25 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.25 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.24 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.23 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.23 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.21 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.2 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.18 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.18 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.17 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.17 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.16 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.15 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.15 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.14 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.14 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.13 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.13 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.12 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 99.09 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.09 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.09 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.08 | |
| KOG1155 | 559 | consensus Anaphase-promoting complex (APC), Cdc23 | 99.07 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.06 |
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-54 Score=396.24 Aligned_cols=248 Identities=21% Similarity=0.257 Sum_probs=213.6
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCC-eeEEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGD-ERLLVAE 150 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E 150 (512)
..++.||+|..|+||++.++. +++.+|+|++....... .+++.+|++++++.+||+||.+||.|..+. .+.|+||
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~---t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKP---TGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcC---CCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 368899999999999999998 89999999996544333 468999999999999999999999999988 4999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCCCeeecccCccccCCC--C
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--K 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--~ 227 (512)
||++|+|.+++. ..+.+++...-+|+.+|++||.|||+ .+ ||||||||+|||++..|.+||||||.++..... .
T Consensus 159 YMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~ 235 (364)
T KOG0581|consen 159 YMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIAN 235 (364)
T ss_pred hcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhcc
Confidence 999999999997 44789999999999999999999996 66 999999999999999999999999999876543 5
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc---CCCCCHH-HHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL---EGNFSSE-EATVVF 303 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 303 (512)
+++||..|||||.+.+..|+.++||||||++++|+.+|+.|++... .....+.+++..+. .+.+|.. +++++.
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~---~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~ 312 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN---PPYLDIFELLCAIVDEPPPRLPEGEFSPEFR 312 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC---CCCCCHHHHHHHHhcCCCCCCCcccCCHHHH
Confidence 7899999999999999999999999999999999999998866531 11122333333333 3345554 888999
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+|+..||++||.+|||+.++++|-.-
T Consensus 313 ~FV~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 313 SFVSCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred HHHHHHhcCCcccCCCHHHHhcCHHH
Confidence 99999999999999999999998543
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-53 Score=412.26 Aligned_cols=273 Identities=34% Similarity=0.623 Sum_probs=235.1
Q ss_pred cccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCc
Q 010340 53 AFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL 132 (512)
Q Consensus 53 ~~~~~~~~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni 132 (512)
....|+++++..+|++|+..++| |+|+||.||+|...+ +..||||++.........+|.+|+.++.+++||||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~----~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nl 133 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSD----GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNL 133 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECC----CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCc
Confidence 67789999999999999998877 999999999999984 47799998887654314569999999999999999
Q ss_pred cceEEEEeeCC-eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CccccccCccceeecCC
Q 010340 133 ANLIGYCCDGD-ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFDEN 209 (512)
Q Consensus 133 v~l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~iiH~Dlkp~Nill~~~ 209 (512)
|+|+|||.+.+ +.+||+||+++|+|.++|+......++|..|++|+.++|+||+|||+.. +||||||||+|||||.+
T Consensus 134 v~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~ 213 (361)
T KOG1187|consen 134 VKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED 213 (361)
T ss_pred ccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC
Confidence 99999999988 5999999999999999998633328999999999999999999999965 59999999999999999
Q ss_pred CCCeeecccCccccCC-CCcc----ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChh-----------h
Q 010340 210 GDPRLSCFGLMKNSRD-GKSY----STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH-----------A 273 (512)
Q Consensus 210 ~~~kl~Dfg~a~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~-----------~ 273 (512)
+.+||+|||+|+.... .... .||.+|++||++..+..+.++|||||||+|+||+||+.+.... .
T Consensus 214 ~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~ 293 (361)
T KOG1187|consen 214 FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA 293 (361)
T ss_pred CCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence 9999999999977654 3322 7899999999999999999999999999999999999754321 1
Q ss_pred HHHHhccchhhhcccccC-CCCCH-HHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 274 LDMIRGKNILHLMDSHLE-GNFSS-EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
...+....+.+++++.+. ...+. .....+..++.+|++.+|.+||+|.+|++.|+.+..
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 233444577888888876 55554 567778999999999999999999999999966543
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-51 Score=400.33 Aligned_cols=251 Identities=29% Similarity=0.424 Sum_probs=214.3
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceE-EEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCC-eeEEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRW-IAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD-ERLLVA 149 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~-vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 149 (512)
+...+|.|+||+||+|.+. |.. ||||++....... .+.|.+|+.+|.+++|||||+++|+|.+.. ..+|||
T Consensus 45 ~~~~iG~G~~g~V~~~~~~-----g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWR-----GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hhhhcccCCceeEEEEEeC-----CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3445899999999999996 344 9999998765444 348999999999999999999999999887 799999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeeecccCccccCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~--- 225 (512)
||+++|+|.++++......+++..++.|+.||++||.|||++++||||||||+|||++.++ ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~ 199 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT 199 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccc
Confidence 9999999999998645788999999999999999999999997689999999999999998 999999999976543
Q ss_pred -CCccccCcccCCccccc--CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 -GKSYSTNLAYTPPEYLR--NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 -~~~~~~t~~y~aPE~~~--~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.+...||+.|||||++. ...|+.|+|||||||++|||+||+.||..... ......++....++.++..+++.+
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----~~~~~~v~~~~~Rp~~p~~~~~~l 275 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----VQVASAVVVGGLRPPIPKECPPHL 275 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcCCCCCCCccCCHHH
Confidence 23368999999999999 56899999999999999999999988765322 112223333445666666788889
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
..|+.+||..||..||++.+++..|+.+...
T Consensus 276 ~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 276 SSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred HHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999987654
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-51 Score=382.88 Aligned_cols=249 Identities=20% Similarity=0.255 Sum_probs=207.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+|.+..+||.|+||+||+|+++. ++..||||.+.+... ...+.+..|+.+|+.++|||||.+++++..++.+||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~---~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKK---SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccceehhhccCcceEEEEEeEecc---CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 355667789999999999999998 778999999987743 224568999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC------CCCeeecccCcc
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN------GDPRLSCFGLMK 221 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~------~~~kl~Dfg~a~ 221 (512)
|||||.||+|.++|+ ..+.+++.+++.++.||+.||++||+++ ||||||||.||||+.. -.+||+|||+|+
T Consensus 87 VMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999999998 5668999999999999999999999999 9999999999999754 458999999999
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
...+. .+.+|++.|||||++..+.|+.|+|+||+|+|||+|++|+.||.......... ..+ ......+.++...
T Consensus 164 ~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~--~~~-k~~~~~~~~~~~~ 240 (429)
T KOG0595|consen 164 FLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL--YIK-KGNEIVPVLPAEL 240 (429)
T ss_pred hCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH--HHh-ccccccCchhhhc
Confidence 88765 36799999999999999999999999999999999999998876443222211 000 1111223334445
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+..+.+++...+..+|.+|.++.+...+.
T Consensus 241 s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 241 SNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred cCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 55566888899999999998888766553
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-52 Score=387.27 Aligned_cols=250 Identities=20% Similarity=0.253 Sum_probs=208.0
Q ss_pred CCcc-cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-------hhHHHHHHHHHhcCCCCCccceEEEEe
Q 010340 69 FSSD-FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-------PKQFADEAWGVGKLRHKRLANLIGYCC 140 (512)
Q Consensus 69 f~~~-~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~ 140 (512)
|.++ .+.+.||+|+||.|-+|..+. +++.||||++++..... ...+.+|+++|++|+|||||+++++|.
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~---tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~ 246 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKK---TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE 246 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcc---cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee
Confidence 4444 455579999999999999998 99999999998764332 123579999999999999999999999
Q ss_pred eCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC---CCCeeecc
Q 010340 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCF 217 (512)
Q Consensus 141 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Df 217 (512)
.....||||||++||+|.+.+- .++.+.+.....++.|++.|+.|||++| |+||||||+|||+..+ ..+||+||
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred cCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999999999997 6778888899999999999999999999 9999999999999755 67999999
Q ss_pred cCccccCCC---CccccCcccCCcccccCCC---CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc---
Q 010340 218 GLMKNSRDG---KSYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS--- 288 (512)
Q Consensus 218 g~a~~~~~~---~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--- 288 (512)
|+|+..... .+++||+.|.|||++.+.. +..+.|+||+|||||-+|+|.+||.....+. ...+.+..
T Consensus 324 GlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~----sl~eQI~~G~y 399 (475)
T KOG0615|consen 324 GLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP----SLKEQILKGRY 399 (475)
T ss_pred chhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc----cHHHHHhcCcc
Confidence 999987643 5789999999999997655 3347899999999999999998876542221 11111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+......+++..+||.+||..||++|||+.|+|+|-+
T Consensus 400 ~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 400 AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 1122334567888999999999999999999999999855
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-51 Score=398.48 Aligned_cols=246 Identities=20% Similarity=0.216 Sum_probs=213.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..|...+.||+|||+.||.+++.. +|..||+|++.+.... ..+.+.+||++.+.|+|||||+++++|++.+++|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~---tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVY 94 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLD---TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVY 94 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcC---CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceE
Confidence 345566678999999999999977 8899999999875433 2467999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
||.|+|+.++|..+++ ....+++.+++.++.||+.||.|||+++ |||||||..|++|+++.++||+|||+|.....
T Consensus 95 ivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 95 IVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999999997 6788999999999999999999999999 99999999999999999999999999987653
Q ss_pred ---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC--CCCCHHHHH
Q 010340 226 ---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE--GNFSSEEAT 300 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 300 (512)
..+.+|||.|.|||++....++..+||||+|||+|.||+|++||... .+.+....+.. -..|...+.
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk--------~vkety~~Ik~~~Y~~P~~ls~ 243 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK--------TVKETYNKIKLNEYSMPSHLSA 243 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc--------hHHHHHHHHHhcCcccccccCH
Confidence 34789999999999999999999999999999999999999886543 22222222111 134557777
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++.+||.++|+.||.+|||+++|+.+=..
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 89999999999999999999999988543
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-52 Score=367.86 Aligned_cols=248 Identities=20% Similarity=0.273 Sum_probs=208.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEE-EEeeCCe-eE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIG-YCCDGDE-RL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~ 146 (512)
++.|+++||+|+||.||++.... +++.||.|.+.-..... ......|+.+|++|+|||||++++ .+.++.. ++
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~---~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLL---DGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHcCCcchheEEeeecc---CcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 46688999999999999999988 89999999998554433 346889999999999999999999 4544444 89
Q ss_pred EEEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCccccccCccceeecCCCCCeeecccCcc
Q 010340 147 LVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSS---EGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~---~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
||||||.+|+|...+++ ...+.+++..+++++.|++.||..||+ ++.|+||||||.||+|+.+|.+||+|||+++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 99999999999999975 356779999999999999999999998 3349999999999999999999999999999
Q ss_pred ccCCCC----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC---C
Q 010340 222 NSRDGK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN---F 294 (512)
Q Consensus 222 ~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 294 (512)
.+.... +++|||.||+||.+.+.+|+.+|||||+||++|||+.-++||.+. +...+-..+-.++ +
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--------n~~~L~~KI~qgd~~~~ 248 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--------NLLSLCKKIEQGDYPPL 248 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--------cHHHHHHHHHcCCCCCC
Confidence 877654 578999999999999999999999999999999999999887654 2222222222222 3
Q ss_pred C-HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 295 S-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 295 ~-~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
| ...+..+..||..|+..||+.||+.-.++..+..
T Consensus 249 p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 249 PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 3 5678889999999999999999997666555543
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-51 Score=375.78 Aligned_cols=235 Identities=24% Similarity=0.300 Sum_probs=204.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+..+++.||+|+||.||.++.++ +++.+|+|++++..... .+....|..+|.+++||+||.++..|++.+.+||
T Consensus 26 dF~~lkviGkG~fGkV~~Vrk~d---t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 26 DFEILKVIGKGSFGKVFQVRKKD---TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred heeeeeeeeccCCceEEEEEEcc---cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 44578889999999999999997 89999999999775433 4568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC---
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR--- 224 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~--- 224 (512)
|+||+.||.|..+|+ ..+.+++..+..++.+|+.||.|||+.+ ||||||||+|||||.+|+++|+|||+++...
T Consensus 103 Vld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 999999999999997 6788999999999999999999999999 9999999999999999999999999998532
Q ss_pred -CCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC---CCCHHHHH
Q 010340 225 -DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG---NFSSEEAT 300 (512)
Q Consensus 225 -~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 300 (512)
.+.+++||+.|||||++.+..|+..+|+|||||++|||++|.+||.... ...+.+.+... ..+...+.
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~--------~~~~~~~I~~~k~~~~p~~ls~ 251 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED--------VKKMYDKILKGKLPLPPGYLSE 251 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc--------HHHHHHHHhcCcCCCCCccCCH
Confidence 2346799999999999999999999999999999999999998876542 22222222222 23344677
Q ss_pred HHHHHHHHhhccCCCCCCC
Q 010340 301 VVFDLASRCLQYEPRERPN 319 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps 319 (512)
+..+++.++|..||++|..
T Consensus 252 ~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 252 EARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred HHHHHHHHHhccCHHHhcC
Confidence 8899999999999999963
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-50 Score=359.57 Aligned_cols=250 Identities=23% Similarity=0.353 Sum_probs=202.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|..++++|+|+||+||++++++ +|+.||||++..+.... .+-..+||++|++|+|+|+|.++.+|.....++||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~---TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKD---TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred HHhhhhccccCcceEEEEeccCC---cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 46678999999999999999998 99999999998654321 35689999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-C-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-G- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-~- 226 (512)
+|||+. ++-+.|.+ -...++...+..++.|++.|+.|||+++ +|||||||+||||+.+|.+||||||+|+.... +
T Consensus 80 FE~~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 80 FEYCDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred eeecch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 999988 55555543 4566899999999999999999999999 99999999999999999999999999998763 3
Q ss_pred --CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhH--HH-----------------Hhccchhh
Q 010340 227 --KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHAL--DM-----------------IRGKNILH 284 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~--~~-----------------~~~~~~~~ 284 (512)
+.++.|..|+|||.+.| .+|+...|||++||++.||++|.+.|++... +. +....+..
T Consensus 157 ~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~ 236 (396)
T KOG0593|consen 157 NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFH 236 (396)
T ss_pred hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCcee
Confidence 34577999999999988 6799999999999999999999987775421 11 11111100
Q ss_pred hcc-cccC--CCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 285 LMD-SHLE--GNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 285 ~~~-~~~~--~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
-+. +... ... -+..+..+.+|+..||..||.+|++.++++.|
T Consensus 237 Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 237 GVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred eeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 000 0000 000 12344568899999999999999999999876
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-49 Score=382.55 Aligned_cols=249 Identities=27% Similarity=0.429 Sum_probs=217.3
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
++++||+|-||.||.|.+.. ...||+|.++... ...+.|.+|+.+|++|+|+|||+++|+|..++.++||||||+
T Consensus 210 l~~~LG~G~FG~V~~g~~~~----~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNG----STKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHhcCCccceEEEEEEcC----CCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 67899999999999999974 3359999998764 345789999999999999999999999999889999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCccc---
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS--- 230 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~--- 230 (512)
.|+|.++|+......+...+.+.++.|||+|++||++++ +|||||-..|||+++++.+||+|||+|+...+.....
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~ 363 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG 363 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence 999999998767788999999999999999999999999 9999999999999999999999999999554432211
Q ss_pred --cCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 231 --TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 231 --~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
-.+.|+|||.+..+.|+.|||||||||+||||+|-...|+.. .....+.+.+....+-..|..||..+.+|+..
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~----msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~ 439 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG----MSNEEVLELLERGYRLPRPEGCPDEVYELMKS 439 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC----CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHH
Confidence 135799999999999999999999999999999955444322 34455667777777778889999999999999
Q ss_pred hhccCCCCCCChHHHHHHhccccC
Q 010340 309 CLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 309 cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
||+.+|++|||+..+...|+.+..
T Consensus 440 CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 440 CWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HhhCCcccCCCHHHHHHHHHHhhh
Confidence 999999999999999998887653
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=356.41 Aligned_cols=269 Identities=21% Similarity=0.245 Sum_probs=230.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---hHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.++..||.|+||.|.+++.+. ++..+|+|++++...-.. +...+|..+|+.+.||+++++++.|.+.+.++|
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~---~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKH---SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred hhhheeeeccCccceEEEEEEcc---CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 44578889999999999999998 889999999987765443 457889999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||++||.|..+++ ..+++++..++.++.||+.||+|||+++ |++|||||+|||||.+|.+||+|||+|+.....
T Consensus 122 vmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred EEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 999999999999998 6788999999999999999999999999 999999999999999999999999999987654
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC--CCCHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG--NFSSEEATVVFD 304 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 304 (512)
-+.+|||.|+|||+++..+++.++|+|+|||++|||+.|.+||..+.. ..+...++.. .+|+..+..+.+
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v~fP~~fs~~~kd 270 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKVKFPSYFSSDAKD 270 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCcccCCcccCHHHHH
Confidence 467999999999999999999999999999999999999988765432 2233333322 467888888999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccccCCCCCCCCCCCCC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQ 355 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (512)
|+.++|+.|-.+|. ..+..-.+.++..++.....|.........+|..+
T Consensus 271 Ll~~LL~vD~t~R~--gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 271 LLKKLLQVDLTKRF--GNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred HHHHHHhhhhHhhh--cCcCCCccccccCcccccccHHHHhhccccCCCCC
Confidence 99999999999992 22233355677778888888888877776665543
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-48 Score=366.69 Aligned_cols=254 Identities=23% Similarity=0.333 Sum_probs=208.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCC--eeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 149 (512)
+...+.||+|+||.||++...+ ++..+|||.+........+.+.+|+.+|++|+|||||+++|...... .++|.|
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~---~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKK---TGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred hhhhccccCccceEEEEEEecC---CCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 4456778999999999999987 68889999998764333567999999999999999999999855444 689999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CCCCeeecccCccccCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~--- 225 (512)
||+++|+|.+++..... .+++..++.+.+||++||.|||+++ ||||||||+|||++. ++.+||+|||+++....
T Consensus 96 Ey~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred eccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 99999999999985444 7999999999999999999999999 999999999999999 79999999999886552
Q ss_pred ----CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 226 ----GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
.....||+.|||||++..+. ...++|||||||++.||+||+.|+... ......+..+......+.+|...+.
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~---~~~~~~~~~ig~~~~~P~ip~~ls~ 250 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF---FEEAEALLLIGREDSLPEIPDSLSD 250 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh---cchHHHHHHHhccCCCCCCCcccCH
Confidence 23578999999999998543 345999999999999999998664431 0111112222222233467777888
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.+.+|+.+|+..||++|||+.++|+|.......
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 999999999999999999999999997665543
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-47 Score=365.29 Aligned_cols=250 Identities=23% Similarity=0.304 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeC--Cee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG--DER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 145 (512)
..+..|.+||+|+||.||+|++.. +|+.||+|+++.+... ...-..+||.+|++|+||||++|.+...+. +.+
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~---tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLE---TGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecc---cCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 346678899999999999999988 8999999999977632 345678999999999999999999998876 789
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
|||+|||+. +|.-++.. ..-.|++.++..++.|++.||.|||+++ |+|||||.+|||||++|.+||+|||+|+++..
T Consensus 194 YlVFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 999999988 89888853 4557999999999999999999999999 99999999999999999999999999997654
Q ss_pred CC-----ccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh--------cc----
Q 010340 226 GK-----SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL--------MD---- 287 (512)
Q Consensus 226 ~~-----~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~--------~~---- 287 (512)
.. ..+.|..|.|||.+.|.. |+.+.|+||.||||.||++|++.+++.. +......+.++ +.
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t-EveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT-EVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc-HHHHHHHHHHHhCCCChhccccccC
Confidence 33 345689999999998865 9999999999999999999997665431 10000001110 10
Q ss_pred ---cccCC--CCC-------HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 288 ---SHLEG--NFS-------SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 288 ---~~~~~--~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..+.+ .+. ...+....+|+..+|..||.+|.|+.++|+.
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 00000 011 1234567899999999999999999999876
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=367.67 Aligned_cols=245 Identities=22% Similarity=0.269 Sum_probs=210.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
++.+.+.||.|+|++|++|+.+. +++.||||++.+..... .+-+.+|-.+|.+| .||.|++|+-.|.+...+|
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~---t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKA---TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred hcchhheeccccceeEEEeeecC---CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 34467788999999999999998 88999999998765432 24578899999999 8999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+|+||+++|+|.++|+ .-+.|++...+.++.+|+.||+|||++| ||||||||+|||||.+|++||+|||.|+.+.+.
T Consensus 151 FvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999999998 5688999999999999999999999999 999999999999999999999999998854321
Q ss_pred -----------------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc
Q 010340 227 -----------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH 289 (512)
Q Consensus 227 -----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
.+++||..|.+||++..+..+..+|+|+||||||.|+.|.+||... .+...-+.+..
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~-NeyliFqkI~~----- 301 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA-NEYLIFQKIQA----- 301 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc-cHHHHHHHHHH-----
Confidence 3478999999999999999999999999999999999999776543 22222222222
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+.-.+++..++.+.+||.++|..||.+|+|..+|.+|.
T Consensus 302 l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 302 LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 22345666667889999999999999999999998874
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-47 Score=335.69 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=205.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|..++.+|+|.||.||+|++.. +|+.||||+++.....+ .....+||++|+.++|+||+.++++|.+.+.+.||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~---t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTE---TGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecC---CCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEE
Confidence 35567889999999999999988 89999999998765433 34689999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
+||++. +|+..+++ ....++..++..++.++++||+|||++. |+||||||.|+|++.+|.+||+|||+++.+....
T Consensus 80 fEfm~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred EEeccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 999976 89999976 6778999999999999999999999999 9999999999999999999999999999876432
Q ss_pred ---ccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhh-------------------
Q 010340 228 ---SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH------------------- 284 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~------------------- 284 (512)
..+.|..|+|||.+.|.+ |+...||||.|||+.||+.|.+.+++... ...-..+..
T Consensus 157 ~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-idQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 157 IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-IDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-HHHHHHHHHHcCCCCcccCccccccccH
Confidence 336789999999998754 99999999999999999999965554311 100000000
Q ss_pred ----hcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 285 ----LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 285 ----~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..........-+.++.++.+|+.++|..||.+|+++.+++++=
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence 0111111112244566789999999999999999999999873
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=371.99 Aligned_cols=245 Identities=18% Similarity=0.286 Sum_probs=212.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
|....+||+|+.|.||.+.... +++.||||++........+-+.+|+.+|+..+|+|||.+++.|...+.+|+||||
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~---~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKIS---TKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hcchhhhccccccceeeeeecc---CCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 4455688999999999999987 7888999999988877778899999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----C
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 227 (512)
++||+|.+++ ....+++.++..|++++++||+|||.++ |||||||.+|||++.+|.+||+|||++..+... .
T Consensus 352 m~ggsLTDvV---t~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 352 MEGGSLTDVV---TKTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred cCCCchhhhh---hcccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 9999999999 4566999999999999999999999999 999999999999999999999999998776543 4
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc-ccCCCCCHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS-HLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li 306 (512)
+.+||+.|||||++....|+++.||||||++++||+-|++|+..+.. .+.+..+... ...-..+...+..+.+|+
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P----lrAlyLIa~ng~P~lk~~~klS~~~kdFL 503 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRALYLIATNGTPKLKNPEKLSPELKDFL 503 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh----HHHHHHHhhcCCCCcCCccccCHHHHHHH
Confidence 67899999999999999999999999999999999999988653210 0111111111 122234567788899999
Q ss_pred HHhhccCCCCCCChHHHHHHh
Q 010340 307 SRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L 327 (512)
.+||..|+++|+++.|+|+|-
T Consensus 504 ~~cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 504 DRCLVVDVEQRASAKELLEHP 524 (550)
T ss_pred HHHhhcchhcCCCHHHHhcCh
Confidence 999999999999999999983
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-48 Score=364.87 Aligned_cols=252 Identities=19% Similarity=0.289 Sum_probs=208.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhH--HHHHHHHHhcCC-CCCccceEEEEeeCC-ee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ--FADEAWGVGKLR-HKRLANLIGYCCDGD-ER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~ 145 (512)
..|.++++||.|+||.||+|+... ++..||||++++.... .++ =.||++.|++|+ ||||+++.+++.+.. .+
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~---~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKE---TGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecC---CCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 467789999999999999999988 7888999999876533 333 468999999997 999999999999887 99
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++|||||+. +|+++++++ +..|++..++.|+.||++||+|+|.+| +.||||||+|||+.....+||+|||+|+....
T Consensus 86 ~fVfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eeeHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEeccccccccccc
Confidence 999999976 999999875 889999999999999999999999999 99999999999999999999999999997654
Q ss_pred ---CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhH--HHH---------------hccchhh
Q 010340 226 ---GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHAL--DMI---------------RGKNILH 284 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~--~~~---------------~~~~~~~ 284 (512)
-+.++.|..|+|||++.. +.|+.+.|||++|||++|+.+-++.|++... +.+ .+.++..
T Consensus 163 kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 163 KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence 356788999999999865 5589999999999999999999988876411 111 1111111
Q ss_pred hcccccCC-------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 285 LMDSHLEG-------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 285 ~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+.-.+.. .+.+..+.++.++|.+||+.||.+|||+.+++++--
T Consensus 243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 11111111 111336778999999999999999999999999854
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=369.02 Aligned_cols=242 Identities=21% Similarity=0.277 Sum_probs=213.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|.+...||+|+||.||||+.+. +.+.||+|.+.+....+ .+.+.+|+++++.++|||||.++++|+...++++|
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~---t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKY---TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred chhHHHHhcCCccceeeeccccc---ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 45577788999999999999998 88999999999876554 45699999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
+||+.| +|+.+|. ..+.++++.+..|+.+++.||.|||+++ |+|||+||.|||++..|++|+||||+|+.....+
T Consensus 80 te~a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 80 TEYAVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred ehhhhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCce
Confidence 999987 9999997 6788999999999999999999999999 9999999999999999999999999999876643
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC--CCCCHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE--GNFSSEEATVV 302 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 302 (512)
...|||.|||||++.+++|+..+|+||+|||+||+++|++||+... +.+++..++. ..+|...+..+
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--------i~~Lv~~I~~d~v~~p~~~S~~f 227 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--------ITQLVKSILKDPVKPPSTASSSF 227 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--------HHHHHHHHhcCCCCCcccccHHH
Confidence 4578999999999999999999999999999999999998876432 2223322222 23566788889
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHh
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..|+..+|.+||.+|.|..+++.|-
T Consensus 228 ~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 228 VNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred HHHHHHHhhcChhhcccHHHHhcCh
Confidence 9999999999999999999998763
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=341.24 Aligned_cols=260 Identities=19% Similarity=0.222 Sum_probs=209.2
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee-
Q 010340 65 ATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD- 141 (512)
Q Consensus 65 ~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~- 141 (512)
.+++.+++.++.+|++|+||.||+|+++. +++.||+|+++.+.... .-.-.+||.+|.+++|||||.+-.+...
T Consensus 71 gCrsv~efe~lnrI~EGtyGiVYRakdk~---t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~ 147 (419)
T KOG0663|consen 71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKK---TDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS 147 (419)
T ss_pred CcccHHHHHHHhhcccCcceeEEEeccCC---cceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc
Confidence 44555667788999999999999999998 88999999998765322 3457899999999999999999998764
Q ss_pred -CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCc
Q 010340 142 -GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (512)
Q Consensus 142 -~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a 220 (512)
-+.+|||||||+. +|..++.. -.+++...++..++.|+++||+|||.+. |+|||||++|+|++..|.+||+|||+|
T Consensus 148 ~~d~iy~VMe~~Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 148 NMDKIYIVMEYVEH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred ccceeeeeHHHHHh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchh
Confidence 4569999999987 89999975 3478999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC----CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHH----------------Hhc
Q 010340 221 KNSRDG----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDM----------------IRG 279 (512)
Q Consensus 221 ~~~~~~----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~----------------~~~ 279 (512)
+.+... +..+.|..|+|||.+.+.+ |+.+.|+||+|||+.||+++++.|++...-. |.+
T Consensus 225 R~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 225 REYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred hhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 987654 4567799999999998865 9999999999999999999998776542110 000
Q ss_pred cchhhhc---------ccccCCCCCHH-HHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 280 KNILHLM---------DSHLEGNFSSE-EATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 280 ~~~~~~~---------~~~~~~~~~~~-~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
......+ ...++..++.. .++...+|+..+|..||.+|.|+.+.|++=...
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~ 365 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFR 365 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccc
Confidence 0000000 00111122222 456788999999999999999999999985443
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-47 Score=363.85 Aligned_cols=259 Identities=19% Similarity=0.170 Sum_probs=209.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
.++.+++.||+|+||.||+|+.++ +|..+|+|+++++.... .+.+..|-.+|...++|+||+||-.|.+...+|
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~---Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKD---TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred ccchhheeeccccceeEEEEEEcc---CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 456688999999999999999998 99999999999876543 356888999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
|||||++||++..+|. ..+.|++..+..++.+++-|+..||+.| +|||||||+|+|||..|++||+|||++.....
T Consensus 218 LiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999997 6788999999999999999999999999 99999999999999999999999999742100
Q ss_pred ------------------------C--------------------------CccccCcccCCcccccCCCCCCCCcEEeh
Q 010340 226 ------------------------G--------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSF 255 (512)
Q Consensus 226 ------------------------~--------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~sl 255 (512)
. -+.+|||.|||||++.+..|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0 02468999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCC---hHHHHHHhccccC
Q 010340 256 GTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN---TKDLVSTLAPLQN 332 (512)
Q Consensus 256 G~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~~vl~~L~~~~~ 332 (512)
|||+||||.|.+||..+.... ...++..+ ...+..+....++.++.+||.+||. ||++|.. +.||-+
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~-T~rkI~nw-r~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~------- 444 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQE-TYRKIVNW-RETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK------- 444 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHH-HHHHHHHH-hhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc-------
Confidence 999999999998876543221 11122111 1112222223445788999999999 9999965 444444
Q ss_pred CCCCCcccccCC
Q 010340 333 RPDVPSYVMLGI 344 (512)
Q Consensus 333 ~~~~~~~~~~~~ 344 (512)
.|.+....|..+
T Consensus 445 HPfF~~v~W~~l 456 (550)
T KOG0605|consen 445 HPFFKGVDWDHL 456 (550)
T ss_pred CCccccCCcchh
Confidence 454444444443
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=368.82 Aligned_cols=246 Identities=20% Similarity=0.248 Sum_probs=215.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..+.+.+-||.|+.|.|-+|++.. +|+.+|||++.+..... ...+.+||-+|+.+.||||+++|++|++..++|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~---TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ly 88 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAE---TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLY 88 (786)
T ss_pred cceeccccccCCCCceehhhhccc---ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEE
Confidence 345566779999999999999988 99999999998763222 346899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+|.||++||.|++++. ..+++++.++.+++.||+.|+.|||..+ |+||||||+|+|||.++.+||+|||+|..-.++
T Consensus 89 lvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999999997 6789999999999999999999999999 999999999999999999999999999875554
Q ss_pred ---CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC--CCHHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN--FSSEEAT 300 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 300 (512)
.+.+|++.|.+||++.|.+| +.++||||+|||||.||||+.||.. .++..++.....+. .|...+.
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD--------dNir~LLlKV~~G~f~MPs~Is~ 237 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD--------DNIRVLLLKVQRGVFEMPSNISS 237 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC--------ccHHHHHHHHHcCcccCCCcCCH
Confidence 46799999999999999998 5699999999999999999998653 44444444433333 4677888
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++++|+.+||..||++|.|+++|++|-.-
T Consensus 238 eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 238 EAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred HHHHHHHHHhccCccccccHHHHhhCchh
Confidence 89999999999999999999999999653
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-47 Score=377.52 Aligned_cols=365 Identities=19% Similarity=0.244 Sum_probs=288.3
Q ss_pred ccccCHHHHHHHhcCCCcc------cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhc
Q 010340 54 FAEFSLADLRAATNNFSSD------FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGK 126 (512)
Q Consensus 54 ~~~~~~~~~~~~~~~f~~~------~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~ 126 (512)
...++|+|--.+.+.|... .|-+.||.|.||.|++|+++........||||.++....+. ..+|..|+.||.+
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ 686 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ 686 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc
Confidence 3456777766666666432 24456899999999999999866667789999998655332 4579999999999
Q ss_pred CCCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee
Q 010340 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206 (512)
Q Consensus 127 l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill 206 (512)
++||||++|.|+.......+||+|||++|+|..+|+.+ .+.|++.+...++++|+.|+.||-+.+ +|||||-..|||+
T Consensus 687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~-DGqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILV 764 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQN-DGQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILV 764 (996)
T ss_pred CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhc-CCceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheee
Confidence 99999999999999999999999999999999999874 466999999999999999999999999 9999999999999
Q ss_pred cCCCCCeeecccCccccCCCC-ccc----c--CcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHh
Q 010340 207 DENGDPRLSCFGLMKNSRDGK-SYS----T--NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIR 278 (512)
Q Consensus 207 ~~~~~~kl~Dfg~a~~~~~~~-~~~----~--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~ 278 (512)
+.+..+||+|||+++...+.. ... | .+.|.|||.+...++|.+|||||||||+||.++ |..|.+. +.
T Consensus 765 NsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd-----mS 839 (996)
T KOG0196|consen 765 NSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-----MS 839 (996)
T ss_pred ccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc-----cc
Confidence 999999999999999775543 111 1 257999999999999999999999999999775 7777664 45
Q ss_pred ccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccccCCCCCCCCCCCCCCCC
Q 010340 279 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPL 358 (512)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (512)
++.++..+....+-+.|.+|+..+.+|+..||++|-.+||.+.+|+.+|..+...|..........+.+. .+-+.
T Consensus 840 NQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s-----~~lld 914 (996)
T KOG0196|consen 840 NQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPS-----QPLLD 914 (996)
T ss_pred hHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCc-----ccccC
Confidence 5666777777778788899999999999999999999999999999999998776643332222111111 11111
Q ss_pred CCCCCcccccchhHHHHHHHhccccCCccccccchhhHHHHHHHHHHHHHHHhHHH-hhhcHHHHHHHHHHHHh
Q 010340 359 SPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAF-REKEFKTAVDCYSQFID 431 (512)
Q Consensus 359 ~p~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~Ai~~~~~al~ 431 (512)
.+..+...-....+|.+.+.|.++++.+..+++...+.+.++ .++.+...|..+. .+++.--.|..++.-+.
T Consensus 915 ~~~~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q~-s~eDl~~~Gitl~GhqkkIl~SIq~m~~q~~ 987 (996)
T KOG0196|consen 915 RSGSDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQM-SAEDLLRLGITLAGHQKKILSSIQAMRAQMR 987 (996)
T ss_pred CCCCCCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHhh-hHHHHHhhceeecchhHHHHHHHHHHHHHhc
Confidence 222333444568999999999999999999998888777776 4566666676643 34444455555554443
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-46 Score=355.02 Aligned_cols=252 Identities=19% Similarity=0.197 Sum_probs=209.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--------------ChhHHHHHHHHHhcCCCCCccc
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------------DPKQFADEAWGVGKLRHKRLAN 134 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~niv~ 134 (512)
.+.|.++.+||.|.||.|-+|.+.. +++.||||++.+..+. ..+...+||.+|+++.|||||+
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~---~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEV---DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecC---CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 4567789999999999999999987 8999999999865432 1257899999999999999999
Q ss_pred eEEEEeeC--CeeEEEEEccCCCCHHhhhhhcCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 135 LIGYCCDG--DERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 135 l~~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
|+.+..+. +.+|||+|||..|.+...- ...+ +++.++++|++++..||.|||.++ ||||||||+|+||+++|+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCc
Confidence 99999774 5799999999988765433 4455 999999999999999999999999 999999999999999999
Q ss_pred CeeecccCccccCCC---------CccccCcccCCcccccCCC----CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh
Q 010340 212 PRLSCFGLMKNSRDG---------KSYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR 278 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~ 278 (512)
+||+|||.+.....+ ....|||+|+|||.+.++. .+.+.||||+||+||.|+.|+.||..+. .
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~----~ 324 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF----E 324 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch----H
Confidence 999999998755221 2467999999999998743 3568899999999999999999987652 2
Q ss_pred ccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 279 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.....+++...+.-+..++..+.+.+||.++|.+||++|.+..+|..|.+-..
T Consensus 325 ~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 325 LELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred HHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 22334444444444444567788999999999999999999999999987554
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-46 Score=364.36 Aligned_cols=249 Identities=20% Similarity=0.219 Sum_probs=209.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCcc----CC-CChhHHHHHHHHHhcCC-CCCccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH----AW-PDPKQFADEAWGVGKLR-HKRLANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 143 (512)
..|.+.+.||+|+||.|+.|.... ++..||||++.+. .. ...+.+.+|+.+++.++ ||||+++++++....
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~---t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRL---TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeecc---CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 456678889999999999999987 7789999987764 11 12456778999999998 999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-CCCeeecccCccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKN 222 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~a~~ 222 (512)
.+++||||+.||+|.+++. ..+.+.+..+..++.|++.|++|||+++ |+||||||+|||++.+ +++||+|||++..
T Consensus 94 ~~~ivmEy~~gGdL~~~i~--~~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIV--NKGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred eEEEEEEecCCccHHHHHH--HcCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999997 3678999999999999999999999999 9999999999999999 9999999999987
Q ss_pred cC-C---CCccccCcccCCcccccCCC-CC-CCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH
Q 010340 223 SR-D---GKSYSTNLAYTPPEYLRNGR-VT-PESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296 (512)
Q Consensus 223 ~~-~---~~~~~~t~~y~aPE~~~~~~-~~-~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (512)
.. . ..+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||........... +.. -.-.+|.
T Consensus 171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----i~~--~~~~~p~ 244 (370)
T KOG0583|consen 171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----IRK--GEFKIPS 244 (370)
T ss_pred cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----Hhc--CCccCCC
Confidence 72 2 35779999999999999877 85 689999999999999999998765321111111 111 1112344
Q ss_pred HH-HHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 297 EE-ATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 297 ~~-~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.. ++++..|+.+||..||.+|+|+.+|+++-+..
T Consensus 245 ~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~ 279 (370)
T KOG0583|consen 245 YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQ 279 (370)
T ss_pred CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence 44 78899999999999999999999999665443
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-47 Score=358.32 Aligned_cols=243 Identities=18% Similarity=0.295 Sum_probs=211.5
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
..+..||+|+||.||+|.+.. +++.||+|++......+ .+.+.+|+.+|..++++||.++|+.+..+..++++|||
T Consensus 16 ~~~~~IgrGsfG~Vyk~~d~~---t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 16 TKLELIGRGSFGEVYKAIDNK---TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred ccchhccccccceeeeeeecc---ccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 345778999999999999988 88999999999776554 57899999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CC
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GK 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~ 227 (512)
|.||++.+.|. ....+++..+.-++++++.||.|||..+ .+|||||+.|||+..+|.+||+|||++..... ..
T Consensus 93 ~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~ 169 (467)
T KOG0201|consen 93 CGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK 169 (467)
T ss_pred hcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence 99999999996 4555588888899999999999999999 99999999999999999999999999876543 25
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
+++||+.|||||++.+..|+.|+||||||++++||.+|.+|+.. .....+..++.....+.+....++.+.+|+.
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~-----~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~ 244 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSK-----LHPMRVLFLIPKSAPPRLDGDFSPPFKEFVE 244 (467)
T ss_pred cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcc-----cCcceEEEeccCCCCCccccccCHHHHHHHH
Confidence 78999999999999988999999999999999999999966432 2224444445544455555567788999999
Q ss_pred HhhccCCCCCCChHHHHHH
Q 010340 308 RCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~ 326 (512)
.||.+||+.||++.++++|
T Consensus 245 ~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 245 ACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHhhcCcccCcCHHHHhhh
Confidence 9999999999999999886
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=365.66 Aligned_cols=274 Identities=19% Similarity=0.258 Sum_probs=221.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
.+..+++.||+|+||.|+++..+. +++.+|||+++++..- +.+..+.|.+++... +||.+++++..|...+++
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~---~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKG---TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcC---CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 345588999999999999999998 8889999999987643 346788899998888 699999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC-
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR- 224 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~- 224 (512)
|+||||+.||+|..+. ..+.+++..+..++..|+.||.|||+++ |||||||.+|||||.+|++||+|||+++...
T Consensus 445 ~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCC
Confidence 9999999999955444 5678999999999999999999999999 9999999999999999999999999998643
Q ss_pred ---CCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc--CCCCCHHHH
Q 010340 225 ---DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL--EGNFSSEEA 299 (512)
Q Consensus 225 ---~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 299 (512)
...+++|||.|||||++.+..|+.+.|+|||||+|||||.|..||+++..+. +.+.++ ...+|..++
T Consensus 521 ~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee--------~FdsI~~d~~~yP~~ls 592 (694)
T KOG0694|consen 521 QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE--------VFDSIVNDEVRYPRFLS 592 (694)
T ss_pred CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHhcCCCCCCCccc
Confidence 3467899999999999999999999999999999999999999987553332 222222 234577788
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccccCCCCCCCCCCCCCCCCCC
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 360 (512)
.+...++.++|.+||++|..+. -..-+.++..|-+....|...-.....||..+.-.+|
T Consensus 593 ~ea~~il~~ll~k~p~kRLG~~--e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~ 651 (694)
T KOG0694|consen 593 KEAIAIMRRLLRKNPEKRLGSG--ERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGP 651 (694)
T ss_pred HHHHHHHHHHhccCcccccCCC--CCCchhhhhCCccccCCHHHHhhccCCCCCCcccCCh
Confidence 8899999999999999997652 1112223334555555555555555555544433444
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=345.95 Aligned_cols=255 Identities=19% Similarity=0.244 Sum_probs=207.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
-+.|.+..+||.|..++||+|+... .+..||||+++.+.... .+.+.+|+..|+.++||||++++..|..+..+|+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p---~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIP---TNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecc---cCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 3467778889999999999999987 77899999999876655 4789999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||.||.+|++.++++..-...+++..+..|++++++||.|||.+| .||||||+.||||+.+|.+||+|||.+-...+.
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 999999999999998766677999999999999999999999999 999999999999999999999999975432211
Q ss_pred -------CccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh----ccchhhhcccccCCC
Q 010340 227 -------KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR----GKNILHLMDSHLEGN 293 (512)
Q Consensus 227 -------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 293 (512)
.+++||+.|||||++.. ..|+.|+|||||||+..||.+|..||.....-..- .+.........+..+
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d 260 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKD 260 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChH
Confidence 45689999999999643 45999999999999999999999886432111000 000000000011111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
-....+..+..++..||++||.+|||+++++++-
T Consensus 261 ~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~ 294 (516)
T KOG0582|consen 261 EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA 294 (516)
T ss_pred HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence 1233456789999999999999999999999873
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-46 Score=323.31 Aligned_cols=259 Identities=22% Similarity=0.272 Sum_probs=220.5
Q ss_pred CccccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcC
Q 010340 51 APAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL 127 (512)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l 127 (512)
.+....|++++. .+.+.||.|.||.||.|+.+. ++-.||+|++-++.. ....++.+|+++-+.|
T Consensus 13 ~~~~~~~~l~df----------eigr~LgkgkFG~vYlarekk---s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L 79 (281)
T KOG0580|consen 13 SRATKTWTLDDF----------EIGRPLGKGKFGNVYLAREKK---SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL 79 (281)
T ss_pred cccccccchhhc----------cccccccCCccccEeEeeecc---CCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc
Confidence 344455666543 366788999999999999998 888999999987653 2346899999999999
Q ss_pred CCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec
Q 010340 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 128 ~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~ 207 (512)
+||||+++|++|.+....||++||.++|+|+..|+......+++.....++.|+|.||.|+|..+ ||||||||+|+|++
T Consensus 80 ~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg 158 (281)
T KOG0580|consen 80 RHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLG 158 (281)
T ss_pred CCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccC
Confidence 99999999999999999999999999999999998767778999999999999999999999999 99999999999999
Q ss_pred CCCCCeeecccCccccC--CCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh
Q 010340 208 ENGDPRLSCFGLMKNSR--DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~ 285 (512)
..+.+||+|||-+.... ...+.+||..|.+||+..+..++...|+|++|++.||++.|.+||.... .......+
T Consensus 159 ~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~----~~etYkrI 234 (281)
T KOG0580|consen 159 SAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS----HSETYKRI 234 (281)
T ss_pred CCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh----hHHHHHHH
Confidence 99999999999876543 3357899999999999999999999999999999999999997765442 22222222
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.. ..-.+|...+..+.++|.+|+.++|.+|.+..+++.+-+-
T Consensus 235 ~k--~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 235 RK--VDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred HH--ccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 22 2334567778889999999999999999999999988553
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-46 Score=358.43 Aligned_cols=237 Identities=23% Similarity=0.318 Sum_probs=204.1
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
+.=||.|+.|.||+|+++ ++.||||+++.-. ..+|+=|++|+||||+.|.|+|.....+|||||||..
T Consensus 129 LeWlGSGaQGAVF~Grl~-----netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-----NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred hhhhccCcccceeeeecc-----CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence 445799999999999995 4669999986432 3468889999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---CCcccc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---GKSYST 231 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~---~~~~~~ 231 (512)
|-|..+|+ ..+.++......|..+||.|+.|||.+. |||||||.-||||+.+..+||+|||.++...+ ...+.|
T Consensus 197 GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaG 273 (904)
T KOG4721|consen 197 GQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAG 273 (904)
T ss_pred ccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhh
Confidence 99999997 6788999999999999999999999998 99999999999999999999999999876544 346789
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
|..|||||++...+++.|.|||||||||||||||..|+.... ....+.-.-...+.-..|..++..+.-|+++||+
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd----ssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~ 349 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD----SSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWN 349 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc----hheeEEeccCCcccccCcccCchHHHHHHHHHHh
Confidence 999999999999999999999999999999999998753211 1111222223344556788899999999999999
Q ss_pred cCCCCCCChHHHHHHhccc
Q 010340 312 YEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 312 ~~p~~Rps~~~vl~~L~~~ 330 (512)
..|..||+|.+|+.||+-.
T Consensus 350 sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 350 SKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred cCCCCCccHHHHHHHHhhc
Confidence 9999999999999999753
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-45 Score=355.51 Aligned_cols=248 Identities=22% Similarity=0.362 Sum_probs=204.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+..+...||+|.||+||+|.+.. + ||||+++...... .+.|.+|+.++++-+|.||+-+.|+|..++. .||
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG---d---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG---D---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred Hhhccceeccccccceeeccccc---c---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 34466789999999999999976 3 9999998766544 3579999999999999999999999998776 999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--- 225 (512)
+.+|+|.+|+.+|+- ....|+..+.+.|+.||++|+.|||.++ |||||||..||++.+++.|||+|||++.....
T Consensus 466 TqwCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred ehhccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence 999999999999975 4567999999999999999999999999 99999999999999999999999999864321
Q ss_pred ---CCccccCcccCCcccccCC---CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc-cCC---CCC
Q 010340 226 ---GKSYSTNLAYTPPEYLRNG---RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH-LEG---NFS 295 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~ 295 (512)
.....|...|||||++..+ +|+..+||||||||+|||+||..|+.....+ +++-.+... +.+ ...
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d-----qIifmVGrG~l~pd~s~~~ 618 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD-----QIIFMVGRGYLMPDLSKIR 618 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh-----heEEEecccccCccchhhh
Confidence 1233467789999999653 5899999999999999999999886522211 111112211 111 223
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..++.++.+|+..||..++++||.+.+|+..|+.+..
T Consensus 619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 619 SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 5677789999999999999999999999998887764
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-44 Score=376.43 Aligned_cols=430 Identities=17% Similarity=0.132 Sum_probs=288.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... .+++.+|+++++.++||||+++++++.+++..+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~---tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~ly 78 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPV---CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVY 78 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECC---CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEE
Confidence 356788899999999999999887 78889999997653322 346899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhc---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 147 LVAEYMPNDTLAKHLFHW---------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
+||||++||+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 79 LVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 79 YTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEec
Confidence 999999999999998631 1234567788999999999999999999 999999999999999999999999
Q ss_pred cCccccCC----------------------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHH
Q 010340 218 GLMKNSRD----------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD 275 (512)
Q Consensus 218 g~a~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~ 275 (512)
|+++.... .....||+.|+|||++.+..++.++|||||||++|||+||+.|+......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 99875411 01246899999999999999999999999999999999999886542111
Q ss_pred HHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCC-ChHHHHHHhccccCCCC--CCcccccCCCC------
Q 010340 276 MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP-NTKDLVSTLAPLQNRPD--VPSYVMLGIPR------ 346 (512)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-s~~~vl~~L~~~~~~~~--~~~~~~~~~~~------ 346 (512)
..... ...............++.+.+++.+||+.||++|| +++++++.|+....... .+.........
T Consensus 238 ki~~~---~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~ 314 (932)
T PRK13184 238 KISYR---DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFY 314 (932)
T ss_pred hhhhh---hhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhcccc
Confidence 11000 00000000011124456688999999999999996 56677777776543211 11100000000
Q ss_pred --CCCCCCCCCCCCCCC---------------------------CC-----ccccc--chhH-------HH--------H
Q 010340 347 --HEEAPPTPQHPLSPM---------------------------GD-----ACSRM--DLTA-------IH--------Q 375 (512)
Q Consensus 347 --~~~~~~~~~~~~~p~---------------------------~~-----~~~~~--~~~~-------~~--------~ 375 (512)
.......|....+|. .. .++.. +..+ |. -
T Consensus 315 e~iLlsk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~ 394 (932)
T PRK13184 315 EPILLSKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSV 394 (932)
T ss_pred chhhhhhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeeccccccee
Confidence 000000000000000 00 00000 0000 00 0
Q ss_pred HHHhccccCCc-----cccccchh--------hHHHHH-----------------------HHHHHH-------------
Q 010340 376 ILVMTHYKDDE-----GTNELSFQ--------EWTQQM-----------------------RDMLEA------------- 406 (512)
Q Consensus 376 ~l~~~~~~d~~-----~~~~~~~~--------~~~~~~-----------------------~~~~~~------------- 406 (512)
.+..++..... ......++ .....+ ++++.-
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (932)
T PRK13184 395 SLVKNGLEIQKKSQEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGAL 474 (932)
T ss_pred eeecccceeecCCcccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCce
Confidence 00000000000 00000000 000000 221111
Q ss_pred ----HHHHhHHHhhhcHHHHHHHHHHHHhcCCCC--ChHHHhhhHHHhhhc----C---ChHHHHHHHHHHHhhCCCcHH
Q 010340 407 ----RKRGDVAFREKEFKTAVDCYSQFIDVGTMV--SPTVYARRSLCHLMC----D---QPDAALRDAMQAQCVYPDWST 473 (512)
Q Consensus 407 ----~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~~~~----~---~~~~A~~~~~~al~~~p~~~~ 473 (512)
..-..+++..+.|+.|+..|++.-..-|.. -.++.+..|...+.. | .+++|+..|++ +.-.|.-+-
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 553 (932)
T PRK13184 475 RVSCLAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSY-LHGGVGAPL 553 (932)
T ss_pred eeecccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHH-hcCCCCCch
Confidence 123467788999999999999988876651 467888899888763 2 47788888877 455677888
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 474 AFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 474 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
-|..+|.+|..+|+|+|-+++|.-|++.-|.++.
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (932)
T PRK13184 554 EYLGKALVYQRLGEYNEEIKSLLLALKRYSQHPE 587 (932)
T ss_pred HHHhHHHHHHHhhhHHHHHHHHHHHHHhcCCCCc
Confidence 8999999999999999999999999998887653
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=341.25 Aligned_cols=245 Identities=20% Similarity=0.264 Sum_probs=212.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChh---HHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK---QFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+.|.+.+.||.|+||.|-++.... .|+.||||.++++...+.. .+.+||++|+.|+||||+.+|.+|+..+.+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~---sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHK---SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhcc---CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence 456678889999999999999876 8899999999988776643 5889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
|||||..+|.|++++. ..+.|++.+++.+++||..|+.|||.++ ++|||||.+|||+|.++++||+|||++..+.+.
T Consensus 130 ivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 130 IVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 9999999999999997 6678999999999999999999999999 999999999999999999999999999877665
Q ss_pred ---CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCC-CHHHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF-SSEEATV 301 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 301 (512)
.+++|++.|.+||++.|.+| ++..|-|||||+||.|+.|.-||.+. ....++..+..+.+ .+..+..
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~--------Dhk~lvrQIs~GaYrEP~~PSd 278 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR--------DHKRLVRQISRGAYREPETPSD 278 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc--------hHHHHHHHhhcccccCCCCCch
Confidence 47899999999999999998 56899999999999999999876542 22223333333222 2333445
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..-||++||..||++|.|+.+|..|-+
T Consensus 279 A~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 279 ASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 668999999999999999999999865
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=373.21 Aligned_cols=254 Identities=26% Similarity=0.381 Sum_probs=215.0
Q ss_pred cccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.++.+||+|.||.||+|...... .....||||.++..... ...+|++|+++|..|+|||||+|+|+|.+++.++||+
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF 568 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF 568 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence 36778999999999999876643 35678999999977654 3568999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 150 EYMPNDTLAKHLFHWE------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
|||..|+|.++|+-+. ..+|+..+.+.|+.|||.||.||-++. +|||||-.+|+||+++..|||+||
T Consensus 569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDf 647 (774)
T KOG1026|consen 569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDF 647 (774)
T ss_pred EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEeccc
Confidence 9999999999997431 233889999999999999999999998 999999999999999999999999
Q ss_pred cCccccCCCCcc------ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhccccc
Q 010340 218 GLMKNSRDGKSY------STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHL 290 (512)
Q Consensus 218 g~a~~~~~~~~~------~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (512)
|+++..-....+ .-.+.||+||.+..++||++||||||||||||+++ |+.|... ..+..+++.+...-
T Consensus 648 GLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g-----lSn~EVIe~i~~g~ 722 (774)
T KOG1026|consen 648 GLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG-----LSNQEVIECIRAGQ 722 (774)
T ss_pred ccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc-----cchHHHHHHHHcCC
Confidence 999876554332 22468999999999999999999999999999998 5545433 23333444444433
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 291 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.-..|..+|.++..|+..||+.+|++||+++||-..|+....
T Consensus 723 lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 723 LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 356688899999999999999999999999999999987654
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=358.19 Aligned_cols=257 Identities=20% Similarity=0.282 Sum_probs=201.7
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeC-Cee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDG-DER 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~~ 145 (512)
.+.+++.||.|+||.||+|.+.. ...+++.||||++....... ...+.+|+.++..+ +||||++++++|... ..+
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 35577889999999999998632 11245789999997543222 35689999999999 899999999998764 458
Q ss_pred EEEEEccCCCCHHhhhhhcC------------------------------------------------------------
Q 010340 146 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 165 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~------------------------------------------------------------ 165 (512)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 89999999999999986421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC------CccccCcccCCcc
Q 010340 166 NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPE 239 (512)
Q Consensus 166 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE 239 (512)
...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 134788899999999999999999999 999999999999999999999999999764322 1233467899999
Q ss_pred cccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCC
Q 010340 240 YLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318 (512)
Q Consensus 240 ~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 318 (512)
++.+..++.++|||||||++|||++ |..||....... .+...+........+...++.+.+|+.+||+.||.+||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9998899999999999999999997 887765421110 01111111111223445567789999999999999999
Q ss_pred ChHHHHHHhccccC
Q 010340 319 NTKDLVSTLAPLQN 332 (512)
Q Consensus 319 s~~~vl~~L~~~~~ 332 (512)
|+.++++.|+.+..
T Consensus 323 s~~el~~~l~~~~~ 336 (338)
T cd05102 323 TFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-44 Score=351.88 Aligned_cols=248 Identities=17% Similarity=0.192 Sum_probs=206.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+.++.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 93 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKG---TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRV 93 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEE
Confidence 3567788899999999999999987 788999999975432 2235688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++|+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EEEEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999999997 4567899999999999999999999999 99999999999999999999999999986544
Q ss_pred C-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 226 G-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 226 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++...+..+.+
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~ 244 (329)
T PTZ00263 171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI----YEKILAG--RLKFPNWFDGRARD 244 (329)
T ss_pred CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH----HHHHhcC--CcCCCCCCCHHHHH
Confidence 3 345789999999999988899999999999999999999988754321111 1111111 11233345567889
Q ss_pred HHHHhhccCCCCCCC-----hHHHHHHhc
Q 010340 305 LASRCLQYEPRERPN-----TKDLVSTLA 328 (512)
Q Consensus 305 li~~cl~~~p~~Rps-----~~~vl~~L~ 328 (512)
|+.+||+.||.+||+ +.+++.|-.
T Consensus 245 li~~~L~~dP~~R~~~~~~~~~~ll~hp~ 273 (329)
T PTZ00263 245 LVKGLLQTDHTKRLGTLKGGVADVKNHPY 273 (329)
T ss_pred HHHHHhhcCHHHcCCCCCCCHHHHhcCCc
Confidence 999999999999986 688887743
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=349.41 Aligned_cols=248 Identities=19% Similarity=0.196 Sum_probs=216.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh--hHHHHHHHHHhcCCCCCccceEEEEeeCCe-eE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCCDGDE-RL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~ 146 (512)
..|.++..+|+|+||.++.++.+. .++.|++|.+......+. ....+|+.++++++|||||.+.+.|..++. .+
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~---~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKS---DDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred chhhhhhhcCccccchhhhhhhcc---CCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 456788899999999999999987 778999999987665443 468999999999999999999999999888 99
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
|||+||+||+|.+.+.......+++..+..|+.|++.|+.|||+++ |+|||||+.||+++.++.+||+|||+|+.....
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999999998767788999999999999999999999887 999999999999999999999999999987654
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.+..||+.||.||++.+.+|+.|+|||||||++|||++-+++|.............. ......+...+.++
T Consensus 160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~-----~~~~Plp~~ys~el 234 (426)
T KOG0589|consen 160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINR-----GLYSPLPSMYSSEL 234 (426)
T ss_pred hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhh-----ccCCCCCccccHHH
Confidence 367899999999999999999999999999999999999987655433322222211 12335567778889
Q ss_pred HHHHHHhhccCCCCCCChHHHHHH
Q 010340 303 FDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..+|..||..+|+.||++.++|.+
T Consensus 235 ~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 235 RSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999999887
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-44 Score=343.99 Aligned_cols=243 Identities=19% Similarity=0.264 Sum_probs=200.7
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEee----CCeeEEEE
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLLVA 149 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 149 (512)
.||+|++|.||+|.+ +++.||||.+....... .+.|.+|+.+|.+++|||||+++|++.+ ....++||
T Consensus 27 ~i~~g~~~~v~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~ 101 (283)
T PHA02988 27 LIKENDQNSIYKGIF-----NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLIL 101 (283)
T ss_pred EEeeCCceEEEEEEE-----CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEE
Confidence 469999999999998 56789999998664433 3567899999999999999999999977 35689999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccCCC-C
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-K 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~ 227 (512)
||+++|+|.+++. ....+++.....++.+++.||.|||+. + ++||||||+|||++.++.+||+|||+++..... .
T Consensus 102 Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~ 178 (283)
T PHA02988 102 EYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF 178 (283)
T ss_pred EeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhccccc
Confidence 9999999999997 446789999999999999999999985 6 899999999999999999999999998764432 3
Q ss_pred ccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ...+.........+..+++.+.+|
T Consensus 179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~l~~l 254 (283)
T PHA02988 179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI----YDLIINKNNSLKLPLDCPLEIKCI 254 (283)
T ss_pred cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhcCCCCCCCCcCcHHHHHH
Confidence 4567899999999976 6799999999999999999999988754321111 111111122233444567789999
Q ss_pred HHHhhccCCCCCCChHHHHHHhcccc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+.+||+.||++|||+.++++.|+.++
T Consensus 255 i~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 255 VEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 99999999999999999999998765
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=335.92 Aligned_cols=250 Identities=20% Similarity=0.222 Sum_probs=212.8
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---hHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
++...+++.||.|.-|+||++..+. ++..+|+|++.+...... .+...|-+||+.++||.+++||..|+.....
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~---t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~ 152 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRG---TNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS 152 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecC---CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence 4456688999999999999999998 779999999998765443 4677899999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC-
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR- 224 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~- 224 (512)
|+|||||+||+|+.+++++..+.+++..++.++.+|+-||+|||-.| ||+|||||+||||-++|++-|+||.++....
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999999999999888899999999999999999999999999 9999999999999999999999998753110
Q ss_pred ---------------------------------C-C-------------------------CccccCcccCCcccccCCC
Q 010340 225 ---------------------------------D-G-------------------------KSYSTNLAYTPPEYLRNGR 245 (512)
Q Consensus 225 ---------------------------------~-~-------------------------~~~~~t~~y~aPE~~~~~~ 245 (512)
. . ..++||-.|.|||++.|..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 1245788899999999999
Q ss_pred CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCC----hH
Q 010340 246 VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN----TK 321 (512)
Q Consensus 246 ~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~ 321 (512)
.+.+.|+|+|||+||||+.|..||.+.. ....+..++...+.-.-.+..+..+.+||+++|.+||.+|.. +.
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~----~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~ 387 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSN----NKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAA 387 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCC----chhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchH
Confidence 9999999999999999999999977642 223344444444433333466788999999999999999987 77
Q ss_pred HHHHH
Q 010340 322 DLVST 326 (512)
Q Consensus 322 ~vl~~ 326 (512)
||-+|
T Consensus 388 eIK~H 392 (459)
T KOG0610|consen 388 EIKRH 392 (459)
T ss_pred HhhcC
Confidence 77665
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=345.52 Aligned_cols=248 Identities=17% Similarity=0.214 Sum_probs=202.6
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+++.||+|+||.||++.+.. +++.||||.+...... ....+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 3 RHYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred eEEEEEecCCCEEEEEEEEec---CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence 456778999999999999987 7889999998754322 2345789999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV 158 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee
Confidence 9999999998886545557999999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
....||..|+|||++.+..++.++|||||||++|||++|+.||......... ..+...+. .....++...+..+.+|+
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~s~~~~~li 236 (285)
T cd05631 159 RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDRRVK-EDQEEYSEKFSEDAKSIC 236 (285)
T ss_pred cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHHHhh-cccccCCccCCHHHHHHH
Confidence 2346899999999999999999999999999999999999887542111000 00111110 111233445567789999
Q ss_pred HHhhccCCCCCCC-----hHHHHHH
Q 010340 307 SRCLQYEPRERPN-----TKDLVST 326 (512)
Q Consensus 307 ~~cl~~~p~~Rps-----~~~vl~~ 326 (512)
.+||+.||.+||+ +++++++
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 237 RMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999999997 7888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=334.03 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=199.9
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecC--ccCCCChhHHHHHHHHHhcCCCCCccceEEEEee-----CCeeE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFT--KHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD-----GDERL 146 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~~ 146 (512)
.++.||.|+||.|+.+.++. +++.||||++. .......++..+|+++|++++|+||+.+++++.. -..+|
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~---t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKR---TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred ccccccCcceeeEEEEEEcC---CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 36889999999999999998 78999999998 3343446789999999999999999999999865 35689
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
+|+|+| +.+|..+++ .+..++...+..++.||++||.|+|+.+ |+||||||+|+|++.+..+||+|||+|+....
T Consensus 103 iV~elM-etDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 103 LVFELM-ETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred EehhHH-hhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeecccc
Confidence 999999 459999996 5556999999999999999999999999 99999999999999999999999999997742
Q ss_pred -----CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhH-------------------HHHhcc
Q 010340 226 -----GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHAL-------------------DMIRGK 280 (512)
Q Consensus 226 -----~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-------------------~~~~~~ 280 (512)
.+.++.|..|.|||++.. ..||.+.||||+|||+.||++|++.|++... ......
T Consensus 179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~ 258 (359)
T KOG0660|consen 179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE 258 (359)
T ss_pred CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence 245678999999999865 5699999999999999999999988775310 001100
Q ss_pred c---hhhhcccccCCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 281 N---ILHLMDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 281 ~---~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. ............+ -+...+.+.+|+.+||..||.+|+|++++|+|
T Consensus 259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 1111111111111 12445678899999999999999999999988
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-44 Score=352.21 Aligned_cols=239 Identities=20% Similarity=0.239 Sum_probs=200.2
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
.||+|+||.||++.... +++.||||++...... ....+.+|+.++++++||||+++++++...+..+|||||++
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~ 78 (323)
T cd05571 2 LLGKGTFGKVILVREKA---TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYAN 78 (323)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCC
Confidence 47999999999999987 7889999999864322 23467889999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCcc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSY 229 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~ 229 (512)
+|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 79 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 79 GGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence 999999986 4567899999999999999999999999 99999999999999999999999999875322 2345
Q ss_pred ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHh
Q 010340 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 309 (512)
.||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+... ...++...+..+.+|+.+|
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~----~~~~~--~~~~p~~~~~~~~~li~~~ 229 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILME--EIRFPRTLSPEAKSLLAGL 229 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHHHH
Confidence 68999999999998899999999999999999999998875432211110 11111 1234455667789999999
Q ss_pred hccCCCCCC-----ChHHHHHHh
Q 010340 310 LQYEPRERP-----NTKDLVSTL 327 (512)
Q Consensus 310 l~~~p~~Rp-----s~~~vl~~L 327 (512)
|+.||++|| ++.++++|-
T Consensus 230 L~~dP~~R~~~~~~~~~~ll~h~ 252 (323)
T cd05571 230 LKKDPKQRLGGGPEDAKEIMEHR 252 (323)
T ss_pred ccCCHHHcCCCCCCCHHHHHcCC
Confidence 999999999 799998763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=348.51 Aligned_cols=246 Identities=19% Similarity=0.184 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 78 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRI---SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYM 78 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEE
Confidence 35578889999999999999987 7888999998754322 23568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++|+|.+++. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 79 v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 79 LMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 999999999999997 4567899999999999999999999999 999999999999999999999999998865443
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||......... ..+... ...++...+..+.+|+
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li 229 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIY----EKILAG--KLEFPRHLDLYAKDLI 229 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhC--CcCCCccCCHHHHHHH
Confidence 3457899999999999888999999999999999999999886543211110 111111 1233444566788999
Q ss_pred HHhhccCCCCCCC-----hHHHHHHhc
Q 010340 307 SRCLQYEPRERPN-----TKDLVSTLA 328 (512)
Q Consensus 307 ~~cl~~~p~~Rps-----~~~vl~~L~ 328 (512)
.+||+.||.+||+ +.++++|-+
T Consensus 230 ~~~l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 230 KKLLVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred HHHcCCCHHHccCCccCCHHHHhcCcc
Confidence 9999999999995 888887754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=321.74 Aligned_cols=249 Identities=20% Similarity=0.202 Sum_probs=206.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+-.+||+|.|+.||++.... +|+.+|+|+++.... .+.+++.+|+.+-+.|+|||||++.+.+......+||+
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~---tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred hhHHHHHccCchHHHHHHHhcc---chHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 3355578999999999999887 888899999875443 34678999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCccccCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a~~~~~~ 226 (512)
|+|+|++|..-+. ....+++..+-.+++||+++|.|+|.++ |||||+||+|+|+.. .--+||+|||+|......
T Consensus 90 e~m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g 166 (355)
T KOG0033|consen 90 DLVTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG 166 (355)
T ss_pred ecccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence 9999999976664 2356789999999999999999999999 999999999999953 345899999999887754
Q ss_pred C---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 227 K---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
. ...|||+|||||++...+|+..+|||+.|||||-|+.|.+||+.........+...- .....+...+..+++..
T Consensus 167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g--~yd~~~~~w~~is~~Ak 244 (355)
T KOG0033|consen 167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAG--AYDYPSPEWDTVTPEAK 244 (355)
T ss_pred cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcc--ccCCCCcccCcCCHHHH
Confidence 3 457899999999999999999999999999999999999988874332222111111 11233334456778899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+|+.+||..||.+|.|+.|.|+|-+
T Consensus 245 ~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 245 SLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred HHHHHHhccChhhhccHHHHhCCch
Confidence 9999999999999999999998754
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=347.42 Aligned_cols=240 Identities=20% Similarity=0.231 Sum_probs=199.8
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
.||+|+||.||++.... +++.||||++...... ....+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~ 78 (328)
T cd05593 2 LLGKGTFGKVILVREKA---SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVN 78 (328)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCC
Confidence 46999999999999987 7889999999864322 23568899999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCcc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSY 229 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~ 229 (512)
+|+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 79 ~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 155 (328)
T cd05593 79 GGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF 155 (328)
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence 999999886 4567999999999999999999999999 99999999999999999999999999875322 2245
Q ss_pred ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHh
Q 010340 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 309 (512)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||......... ..+.. ....++...+..+.+|+.+|
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~----~~~~~--~~~~~p~~~~~~~~~li~~~ 229 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILM--EDIKFPRTLSADAKSLLSGL 229 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH----HHhcc--CCccCCCCCCHHHHHHHHHH
Confidence 6899999999999889999999999999999999999887543221111 01110 11233445667788999999
Q ss_pred hccCCCCCC-----ChHHHHHHhc
Q 010340 310 LQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 310 l~~~p~~Rp-----s~~~vl~~L~ 328 (512)
|..||.+|+ ++.+++++-+
T Consensus 230 L~~dP~~R~~~~~~~~~~il~h~~ 253 (328)
T cd05593 230 LIKDPNKRLGGGPDDAKEIMRHSF 253 (328)
T ss_pred cCCCHHHcCCCCCCCHHHHhcCCC
Confidence 999999997 8899988743
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=349.57 Aligned_cols=251 Identities=18% Similarity=0.175 Sum_probs=198.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++++.+++.||.|+||.||+|.+.. +++.||||++....... .+.+.+|+++++.++|+||+++++++.+.+.+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 149 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRP---TGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV 149 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECC---CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence 3445577889999999999999887 78899999986543222 3568999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++|+|.+.. ..++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 150 v~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 150 LLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred EEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99999999986533 3567788899999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCcccCCcccccC-----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+. ..............+...
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 300 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWA--SLMCAICMSQPPEAPATA 300 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHH--HHHHHHhccCCCCCCCcc
Confidence 34578999999999743 22456899999999999999999887522111000 000000111122234455
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+..+.+||.+||+.||++|||+.+++++-.-..
T Consensus 301 ~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 301 SREFRHFISCCLQREPAKRWSAMQLLQHPFILR 333 (353)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence 677899999999999999999999999855433
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-43 Score=346.72 Aligned_cols=255 Identities=20% Similarity=0.263 Sum_probs=205.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.++.+++.||+|+||.||++.+.. ++..||+|++....... .+.+.+|+++|+.++||||+++++++...+..++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKP---SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 356688899999999999999987 78889999997643222 35799999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++|+|.+++. ....+++..+..++.|++.||.|||+.+.|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 159 (331)
T cd06649 82 MEHMDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 159 (331)
T ss_pred eecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccccc
Confidence 99999999999996 34568999999999999999999998644999999999999999999999999998765332
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh---ccch---------------------
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR---GKNI--------------------- 282 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~~~~--------------------- 282 (512)
....||+.|+|||++.+..++.++|||||||++|||+||+.||......... ....
T Consensus 160 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (331)
T cd06649 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRP 239 (331)
T ss_pred ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccc
Confidence 3456899999999999888999999999999999999999887532111110 0000
Q ss_pred --------------hhhccccc---CCCC-CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 283 --------------LHLMDSHL---EGNF-SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 283 --------------~~~~~~~~---~~~~-~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
........ .... ....+.++.+|+.+||+.||++|||+.+++++..-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 240 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred ccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 00000000 0011 12345678999999999999999999999998653
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=347.31 Aligned_cols=252 Identities=18% Similarity=0.187 Sum_probs=205.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+|.+++.||+|+||.||+|.+.. +++.||||++..... .....+.+|++++..++||||+++++++.+.+..+|
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~l 78 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKD---TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYL 78 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEE
Confidence 45678899999999999999987 788899999976432 223568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-C
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-G 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-~ 226 (512)
||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..... .
T Consensus 79 v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~ 155 (333)
T cd05600 79 AMEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYA 155 (333)
T ss_pred EEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCccccccc
Confidence 999999999999996 4567899999999999999999999999 99999999999999999999999999876543 3
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc--cchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG--KNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....||+.|+|||++.+..++.++|||||||++|||++|..||.......... ...................+..+.+
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 235 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWD 235 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHH
Confidence 45678999999999998899999999999999999999998875432211100 0000001110011111234677889
Q ss_pred HHHHhhccCCCCCCChHHHHHHhc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
++.+||..+|.+||++.+++++-.
T Consensus 236 li~~~l~~~~~rr~s~~~ll~h~~ 259 (333)
T cd05600 236 LITKLINDPSRRFGSLEDIKNHPF 259 (333)
T ss_pred HHHHHhhChhhhcCCHHHHHhCcc
Confidence 999999999999999999998844
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=344.73 Aligned_cols=237 Identities=18% Similarity=0.208 Sum_probs=197.0
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
||+|+||.||++.+.. +++.||+|++..... .....+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 77 (312)
T cd05585 1 IGKGSFGKVMQVRKRD---TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFING 77 (312)
T ss_pred CCcCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCC
Confidence 6999999999999987 788899999875432 2235688999999999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCccc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSYS 230 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~ 230 (512)
|+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 78 g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 78 GELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99999997 4567999999999999999999999999 99999999999999999999999999875322 22456
Q ss_pred cCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhh
Q 010340 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310 (512)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 310 (512)
||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ...++...++.+.+++.+||
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~li~~~L 228 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMY----RKILQE--PLRFPDGFDRDAKDLLIGLL 228 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHH----HHHHcC--CCCCCCcCCHHHHHHHHHHc
Confidence 899999999999889999999999999999999999887543222111 111111 12334456677889999999
Q ss_pred ccCCCCCCC---hHHHHHH
Q 010340 311 QYEPRERPN---TKDLVST 326 (512)
Q Consensus 311 ~~~p~~Rps---~~~vl~~ 326 (512)
..||.+||+ +.+++.|
T Consensus 229 ~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 229 SRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CCCHHHcCCCCCHHHHHcC
Confidence 999999985 5666665
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=336.44 Aligned_cols=253 Identities=20% Similarity=0.274 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+.+...||+|+||.||+|.+......+..||+|.++...... ...+.+|+.++..++||||+++++++..++..++||
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 85 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVT 85 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEE
Confidence 4557778999999999999876544467889999998653222 346889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++|+|.+++.. ....+++..++.++.||+.||+|||+.+ ++||||||+|||++.++.++++|||.+.......
T Consensus 86 e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 86 EYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred EeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence 99999999999964 3457899999999999999999999999 9999999999999999999999999876532221
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...++..|+|||++.+..++.++|||||||++||+++ |..|+....... ....+........+..++..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 238 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-----VIKAVEDGFRLPAPRNCPNLLH 238 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-----HHHHHHCCCCCCCCCCCCHHHH
Confidence 2234578999999998999999999999999999875 887765332111 1111111122233455667789
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+++.+||+.+|.+||++.+|++.|..+
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=326.77 Aligned_cols=250 Identities=22% Similarity=0.270 Sum_probs=201.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCC-ccceEEEEeeCC----
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKR-LANLIGYCCDGD---- 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~---- 143 (512)
.+..+.+||+|+||+||+|+.+. +|+.||+|+++..... .+....+|+.+|+.++|+| ||++++++...+
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~---~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKR---TGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEec---CCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 34466778999999999999998 8899999999876542 3567899999999999999 999999998877
Q ss_pred --eeEEEEEccCCCCHHhhhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 144 --ERLLVAEYMPNDTLAKHLFHWEN--QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 144 --~~~lv~E~~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
.++|||||++. +|..++..... ..++...+..++.||+.||+|||+++ |+||||||.||||+.+|.+||+|||+
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccch
Confidence 78999999965 89999975332 46788899999999999999999999 99999999999999999999999999
Q ss_pred ccccCC----CCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC--
Q 010340 220 MKNSRD----GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG-- 292 (512)
Q Consensus 220 a~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 292 (512)
|+...- -...++|..|.|||++.+. .|+...||||+|||+.||++++..|++.... .....+..++......
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~-~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI-DQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH-HHHHHHHHHcCCCCccCC
Confidence 986542 2345789999999999887 5999999999999999999999888765221 1011111111110000
Q ss_pred -----------C---C--C----H---HHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 293 -----------N---F--S----S---EEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 293 -----------~---~--~----~---~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. + + . .......+++.+||+.+|.+|.|++.++.|
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0 0 0 1 112468899999999999999999999998
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=371.10 Aligned_cols=256 Identities=25% Similarity=0.370 Sum_probs=212.6
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCC--ceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDN--RRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~--~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+...||+|.||.||.|...+-..+ ...||||.+.+.... ...+|.+|..+|+.++|||||+++|+|.+....+|++
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence 3556789999999999998764332 345999999876433 3568999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 150 EYMPNDTLAKHLFHWE-----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
|||+||+|..+|++.. ...++..+.+.++.|||+|+.||++++ +|||||-.+|+||+....+||+|||+|+...
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 9999999999998631 456899999999999999999999998 9999999999999999999999999999544
Q ss_pred CCCcc------ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 225 DGKSY------STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 225 ~~~~~------~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
....+ .--..|||||.+..+.||.|+|||||||+|||++|...+|+... .+..+...+...-+-+.|..|
T Consensus 854 ~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~----~n~~v~~~~~~ggRL~~P~~C 929 (1025)
T KOG1095|consen 854 DKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR----SNFEVLLDVLEGGRLDPPSYC 929 (1025)
T ss_pred hchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc----chHHHHHHHHhCCccCCCCCC
Confidence 33221 11357999999999999999999999999999999776655442 222233322222355678889
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+..+.++|..||+.+|++||++..|++.+..+.+.
T Consensus 930 P~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 930 PEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred ChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 99999999999999999999999999988776644
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=348.93 Aligned_cols=248 Identities=17% Similarity=0.178 Sum_probs=204.0
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+.++.+++.||+|+||.||+|.+... .+..||+|++..... ...+.+.+|+.++..++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 106 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNE--DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL 106 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECC--CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence 34567888999999999999987652 346899999875432 2245688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 107 ~lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999997 4557999999999999999999999999 99999999999999999999999999976543
Q ss_pred -CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........ ...+... ...++...+..+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~ 257 (340)
T PTZ00426 184 RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI----YQKILEG--IIYFPKFLDNNCKH 257 (340)
T ss_pred CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH----HHHHhcC--CCCCCCCCCHHHHH
Confidence 2355789999999999988899999999999999999999988764321111 1111111 11234445566889
Q ss_pred HHHHhhccCCCCCC-----ChHHHHHHh
Q 010340 305 LASRCLQYEPRERP-----NTKDLVSTL 327 (512)
Q Consensus 305 li~~cl~~~p~~Rp-----s~~~vl~~L 327 (512)
++.+||+.||.+|+ ++++++++-
T Consensus 258 li~~~l~~dp~~R~~~~~~~~~~~~~hp 285 (340)
T PTZ00426 258 LMKKLLSHDLTKRYGNLKKGAQNVKEHP 285 (340)
T ss_pred HHHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence 99999999999995 788888774
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=349.50 Aligned_cols=257 Identities=21% Similarity=0.333 Sum_probs=210.8
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceE-EEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRW-IAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~-vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+.||+|+||.||+|+++..+..... ||||..+.+.. ....+|.+|+++|+.++|||||++||++.....++|||
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivm 240 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVM 240 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEE
Confidence 457899999999999999875331223 89999986332 22467999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
|+|.||+|.++|++ ....++..++..++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+|||+++......
T Consensus 241 El~~gGsL~~~L~k-~~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~ 318 (474)
T KOG0194|consen 241 ELCNGGSLDDYLKK-NKKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK 318 (474)
T ss_pred EecCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceeec
Confidence 99999999999985 3336999999999999999999999999 9999999999999999999999999987654211
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...-...|+|||.+..+.|+.++|||||||++||+++ |..|++........ ..+.....+...+...+..+..
T Consensus 319 ~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~----~kI~~~~~r~~~~~~~p~~~~~ 394 (474)
T KOG0194|consen 319 KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK----AKIVKNGYRMPIPSKTPKELAK 394 (474)
T ss_pred cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH----HHHHhcCccCCCCCCCHHHHHH
Confidence 1123467999999999999999999999999999999 67665543222111 1222334445556677888999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccCCCCC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 336 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~ 336 (512)
++.+||..+|++||||.++.+.|+.+......
T Consensus 395 ~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 395 VMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999988765543
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=346.16 Aligned_cols=239 Identities=20% Similarity=0.245 Sum_probs=198.6
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
.||+|+||.||++.... +++.||+|++...... ....+.+|+.+++.++||||+++++++...+..+|||||++
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~ 78 (323)
T cd05595 2 LLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 78 (323)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCC
Confidence 47999999999999887 7889999999764322 23467889999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCcc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSY 229 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~ 229 (512)
+|+|..++. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... ....
T Consensus 79 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 155 (323)
T cd05595 79 GGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence 999999886 4457899999999999999999999999 99999999999999999999999999875322 1235
Q ss_pred ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHh
Q 010340 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 309 (512)
.||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ...++...++.+.+++.+|
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~----~~~~~~--~~~~p~~~~~~~~~li~~~ 229 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILME--EIRFPRTLSPEAKSLLAGL 229 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH----HHHhcC--CCCCCCCCCHHHHHHHHHH
Confidence 6899999999999889999999999999999999999887543211110 111111 1123445567788999999
Q ss_pred hccCCCCCC-----ChHHHHHHh
Q 010340 310 LQYEPRERP-----NTKDLVSTL 327 (512)
Q Consensus 310 l~~~p~~Rp-----s~~~vl~~L 327 (512)
|+.||.+|+ ++.+++++-
T Consensus 230 L~~dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 230 LKKDPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred ccCCHHHhCCCCCCCHHHHHcCC
Confidence 999999998 888888774
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-43 Score=351.03 Aligned_cols=254 Identities=20% Similarity=0.301 Sum_probs=200.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
++.+.+.||+|+||.||+|.+... ..++..||||+++..... ..+.+.+|+.+|..+ +||||++++++|.+.+..+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~ 115 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL 115 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence 355678899999999999975321 125678999999754322 245688999999999 8999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC-------------------------------------------------------------
Q 010340 147 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 165 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~------------------------------------------------------------- 165 (512)
+||||+++|+|.+++....
T Consensus 116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (375)
T cd05104 116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI 195 (375)
T ss_pred eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence 9999999999999986421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC------
Q 010340 166 ------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------ 227 (512)
Q Consensus 166 ------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------ 227 (512)
...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 274 (375)
T cd05104 196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG 274 (375)
T ss_pred ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence 124788999999999999999999998 9999999999999999999999999987654322
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
...++..|+|||++.+..++.++|||||||++|||++ |..|+...... ......+........+...+.++.+|+
T Consensus 275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li 350 (375)
T cd05104 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD----SKFYKMIKEGYRMLSPECAPSEMYDIM 350 (375)
T ss_pred CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch----HHHHHHHHhCccCCCCCCCCHHHHHHH
Confidence 1233567999999998899999999999999999998 66555432111 111112222222222333456789999
Q ss_pred HHhhccCCCCCCChHHHHHHhcc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+||+.||++|||+.+|++.|+.
T Consensus 351 ~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 351 KSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHccCChhHCcCHHHHHHHHHh
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-43 Score=351.42 Aligned_cols=250 Identities=18% Similarity=0.177 Sum_probs=199.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|++++..++||||+++++++.+.+.+++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~l 78 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVD---THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYF 78 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEE
Confidence 35578899999999999999987 78899999997643222 3468899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 79 v~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 79 VMDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999999996 4457899999999999999999999999 99999999999999999999999998753210
Q ss_pred -------------------------------------------------CCccccCcccCCcccccCCCCCCCCcEEehH
Q 010340 226 -------------------------------------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFG 256 (512)
Q Consensus 226 -------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG 256 (512)
.....||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0124689999999999988899999999999
Q ss_pred HHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH--hhccCCCCCCChHHHHHHhc
Q 010340 257 TVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR--CLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 257 ~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~--cl~~~p~~Rps~~~vl~~L~ 328 (512)
|++|||+||+.||......... ..+... ............++++.+|+.+ |+..+|..|+++.++++|-.
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~-~~i~~~-~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~ 307 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQ-LKVINW-ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF 307 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHH-HHHHcc-ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcc
Confidence 9999999999887543211111 001100 0111111112345678889988 55666777999999998843
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=351.84 Aligned_cols=255 Identities=21% Similarity=0.317 Sum_probs=203.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
++.+++.||+|+||.||+|.+... ..+++.||||++......+ .+.+.+|+.+++.+ +|+|||+++++|...+..+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 355778899999999999986431 1245679999997654332 35688999999999 8999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC-------------------------------------------------------------
Q 010340 147 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 165 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~------------------------------------------------------------- 165 (512)
+||||+++|+|.++++...
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999985321
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC------ccccC
Q 010340 166 -------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------SYSTN 232 (512)
Q Consensus 166 -------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~t 232 (512)
...+++..+++|+.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++...... ...++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 124788999999999999999999999 9999999999999999999999999987643322 12245
Q ss_pred cccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 233 LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 233 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
..|+|||++.+..++.++|||||||++|||++ |+.||...... ...............+...++.+.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN----SKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----HHHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999988889999999999999999997 88776543211 11112222222222333345678999999999
Q ss_pred cCCCCCCChHHHHHHhccc
Q 010340 312 YEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 312 ~~p~~Rps~~~vl~~L~~~ 330 (512)
.||.+|||+.++++.|+.+
T Consensus 354 ~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CChhhCcCHHHHHHHHHHH
Confidence 9999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-44 Score=329.75 Aligned_cols=243 Identities=26% Similarity=0.332 Sum_probs=193.4
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCC-----eeEEEE
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-----ERLLVA 149 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ 149 (512)
.+.+|.|+||.||+|.... +++.||||++-.+. +--.+|+.+|+.++|||||++.-+|.... ...+||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e---~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRE---TEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred eEEEeecccceEEEEEEcC---CCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 4456999999999999988 67889999986544 34467999999999999999999886532 346899
Q ss_pred EccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-CCCeeecccCccccCCC
Q 010340 150 EYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~ 226 (512)
||||. ||.+++++ ..+..++...+.-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+.....
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 99987 99999974 23567888888999999999999999998 9999999999999955 99999999999976554
Q ss_pred C---ccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHH----------------HHhccch----
Q 010340 227 K---SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALD----------------MIRGKNI---- 282 (512)
Q Consensus 227 ~---~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~----------------~~~~~~~---- 282 (512)
. ++..|..|+|||.+.|.. |+.+.||||.|||+.||+-|++.|++...- .+...+.
T Consensus 180 epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~ 259 (364)
T KOG0658|consen 180 EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTE 259 (364)
T ss_pred CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccc
Confidence 3 556799999999998854 999999999999999999999888764111 0000000
Q ss_pred ---hhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 283 ---LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 283 ---~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.++........+....+++..+|+.++|..+|.+|.++.+++.+
T Consensus 260 ~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 260 FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 01111111111334556778999999999999999999999887
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-43 Score=336.43 Aligned_cols=253 Identities=26% Similarity=0.394 Sum_probs=206.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||+|...... .....||+|.+....... ...|.+|+.++..++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 4557889999999999999876532 234679999987543222 3468999999999999999999999999899999
Q ss_pred EEEccCCCCHHhhhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCe
Q 010340 148 VAEYMPNDTLAKHLFHWEN--------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 213 (512)
+|||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+|
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~ 164 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVK 164 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEE
Confidence 9999999999999964321 56889999999999999999999999 99999999999999999999
Q ss_pred eecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhc
Q 010340 214 LSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLM 286 (512)
Q Consensus 214 l~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~ 286 (512)
|+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..|+...... .+...+
T Consensus 165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-----~~~~~i 239 (283)
T cd05048 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-----EVIEMI 239 (283)
T ss_pred ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHH
Confidence 9999998754322 22345778999999988889999999999999999998 88776543211 122222
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
........+..++..+.+|+.+||+.||.+||++.+|+++|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 240 RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 2222333456677889999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-43 Score=342.59 Aligned_cols=243 Identities=22% Similarity=0.282 Sum_probs=200.0
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.||+|+||.||++....+..+++.||||++..... .....+.+|+.+|+.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 568999999999999865544788999999875422 2234678899999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CC
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GK 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~ 227 (512)
+++++|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 99999999996 4566889999999999999999999999 99999999999999999999999999875322 12
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++...++.+.+++.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT----IDKILKG--KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHH
Confidence 34689999999999988899999999999999999999988754321111 1111111 12334455677889999
Q ss_pred HhhccCCCCCC-----ChHHHHHHh
Q 010340 308 RCLQYEPRERP-----NTKDLVSTL 327 (512)
Q Consensus 308 ~cl~~~p~~Rp-----s~~~vl~~L 327 (512)
+||+.||++|| ++.+++++-
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcCC
Confidence 99999999999 788888764
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-43 Score=350.07 Aligned_cols=249 Identities=18% Similarity=0.143 Sum_probs=198.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+|.+++.||.|+||.||++.... +++.||||++.+... ...+.+.+|++++..++||||+++++++.+....+|
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~l 78 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKD---TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYL 78 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEE
Confidence 35578889999999999999987 788999999875432 123568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||++||+|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 79 v~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 79 IMEFLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred EEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999996 4567899999999999999999999999 999999999999999999999999998532110
Q ss_pred --------------------------------------------------CccccCcccCCcccccCCCCCCCCcEEehH
Q 010340 227 --------------------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFG 256 (512)
Q Consensus 227 --------------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG 256 (512)
....||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 023589999999999988999999999999
Q ss_pred HHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCC---CChHHHHHHhc
Q 010340 257 TVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRER---PNTKDLVSTLA 328 (512)
Q Consensus 257 ~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R---ps~~~vl~~L~ 328 (512)
|++|||+||..||......... ..+.... ..+.-......+..+.+|+.+||. +|.+| +++.+++.+-.
T Consensus 236 vil~elltG~~Pf~~~~~~~~~-~~i~~~~-~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~ 307 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHETY-RKIINWR-ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF 307 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHHH-HHHHccC-CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence 9999999999887543211110 0111100 001101111345678899999997 77765 59999998853
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=346.48 Aligned_cols=246 Identities=17% Similarity=0.114 Sum_probs=195.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||++.... +++.||||++...... ....+.+|+.++..++||||+++++.+.+....+|
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~l 78 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKD---TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYL 78 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEE
Confidence 34577889999999999999887 7889999999754321 23468889999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||++||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 79 v~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 79 IMEFLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred EEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999997 4567999999999999999999999999 999999999999999999999999998643211
Q ss_pred --------------------------------------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCC
Q 010340 227 --------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHI 268 (512)
Q Consensus 227 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~ 268 (512)
...+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 134689999999999988999999999999999999999988
Q ss_pred CChhhHHHHhccchhhhcccccCCCCC--HHHHHHHHHHHHHhhc--cCCCCCCChHHHHHH
Q 010340 269 PPSHALDMIRGKNILHLMDSHLEGNFS--SEEATVVFDLASRCLQ--YEPRERPNTKDLVST 326 (512)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~--~~p~~Rps~~~vl~~ 326 (512)
|......... ..+........++ ...++.+.+++.+++. .++..||++.+|++|
T Consensus 236 f~~~~~~~~~----~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 236 FCSETPQETY----KKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCHHHHH----HHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 7543211111 1111100000111 1234567788887553 233356899999887
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-43 Score=357.13 Aligned_cols=253 Identities=19% Similarity=0.177 Sum_probs=211.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEE-ee------C
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYC-CD------G 142 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~-~~------~ 142 (512)
...|.+.|.+|||+.||.|.+.. .++.||+|++-.......+.+.+||++|+.|+ |+|||.+++.. .. .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~---~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVK---GGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecC---CCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 45678889999999999999986 44789999998776666788999999999995 99999999932 21 1
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeecCCCCCeeecccCcc
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
-+++|.||||.||.|-+++..+....|++.++++|+.++++|+.+||... +|||||||-+||||+.+|..||||||.+.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 35789999999999999998766677999999999999999999999987 69999999999999999999999999886
Q ss_pred ccCCC--C-----------ccccCcccCCcccc---cCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh
Q 010340 222 NSRDG--K-----------SYSTNLAYTPPEYL---RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285 (512)
Q Consensus 222 ~~~~~--~-----------~~~~t~~y~aPE~~---~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~ 285 (512)
..... . ...+|+.|+|||++ .+.+++.|+|||+|||+||-|+....||... ....|
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s--------g~laI 266 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES--------GKLAI 266 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC--------cceeE
Confidence 43211 1 12468999999997 5677999999999999999999999986432 22333
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
++....-+..+..+..+.+||..||+.||.+||++-+++..+..++..+
T Consensus 267 lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 267 LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 3333333334678889999999999999999999999999998877554
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=346.76 Aligned_cols=242 Identities=20% Similarity=0.293 Sum_probs=207.4
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 156 (512)
.||+|+||+||-|++.+ +...+|||.+.........-+..||.+.++|+|.|||+++|.|.+++++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~---tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMD---TQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeecccc---ceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 36999999999999998 888899999987665555678999999999999999999999999999999999999999
Q ss_pred HHhhhhhcCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec-CCCCCeeecccCccccC----CCCcc
Q 010340 157 LAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNSR----DGKSY 229 (512)
Q Consensus 157 L~~~l~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~----~~~~~ 229 (512)
|.++|+. .=+++ ++.++-.+.+||++||.|||++. |||||||.+|||++ -.|.+||+|||.++... -..++
T Consensus 659 LSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF 736 (1226)
T KOG4279|consen 659 LSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF 736 (1226)
T ss_pred HHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence 9999974 34556 88899999999999999999998 99999999999996 78999999999887643 34578
Q ss_pred ccCcccCCcccccCCC--CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 230 STNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
.||..|||||++..++ |+.++|||||||++.||.||++||..-..... .+.+.--....+++|.+.+.++..+|.
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---AMFkVGmyKvHP~iPeelsaeak~Fil 813 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---AMFKVGMYKVHPPIPEELSAEAKNFIL 813 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---hhhhhcceecCCCCcHHHHHHHHHHHH
Confidence 8999999999997654 99999999999999999999987654322111 111222223456788999999999999
Q ss_pred HhhccCCCCCCChHHHHHH
Q 010340 308 RCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~ 326 (512)
+|+..||.+||++.++|..
T Consensus 814 rcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 814 RCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHcCCCcccCccHHHhccC
Confidence 9999999999999999876
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=337.77 Aligned_cols=256 Identities=22% Similarity=0.284 Sum_probs=198.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC-------------CCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN-------------DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLI 136 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~-------------~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~ 136 (512)
.+.+.+.||+|+||.||+|.+..+. .++..||||.+....... ...|.+|++++.+++||||++++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 4557788999999999999865321 144579999987653222 35689999999999999999999
Q ss_pred EEEeeCCeeEEEEEccCCCCHHhhhhhcC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 010340 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWE-----------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199 (512)
Q Consensus 137 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl 199 (512)
+++.+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dl 164 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDL 164 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCc
Confidence 99999999999999999999999985421 124788899999999999999999999 999999
Q ss_pred CccceeecCCCCCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCC--CCCCh
Q 010340 200 NAYRVLFDENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK--HIPPS 271 (512)
Q Consensus 200 kp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~--~~~~~ 271 (512)
||+|||++.++.+||+|||+++...... ...++..|+|||++.++.++.++|||||||++|||+++. .|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 9999999999999999999987653322 233467899999998888999999999999999999753 33332
Q ss_pred hhHHHHhccchhhhcc---cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 272 HALDMIRGKNILHLMD---SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 272 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....... ........ .......++.++..+.+|+.+||+.||++|||+.+|.+.|+
T Consensus 245 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 245 LTDEQVI-ENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCHHHHH-HHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 1111110 01111111 01111223445677899999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=340.87 Aligned_cols=246 Identities=20% Similarity=0.248 Sum_probs=208.6
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---hHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.+||.|+||.||-+++.. +...||||++.-+..... .++.+||..|++++|||++.+-|+|......||||||
T Consensus 31 LrEIGHGSFGAVYfArd~~---n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHhcCCccceeEEeeccC---ccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 5688999999999999988 788999999987766553 4689999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCcccc
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST 231 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 231 (512)
|-| +-.++|.- ...++.+..+..|+.+.+.||+|||+.+ .||||||..|||+++.|.|||+|||.|....+..+++|
T Consensus 108 ClG-SAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvG 184 (948)
T KOG0577|consen 108 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVG 184 (948)
T ss_pred Hhc-cHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccC
Confidence 965 77787753 4567899999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 232 NLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 232 t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
||.|||||++. .+.|+.++|||||||+..||.-.++|.+... ....+.++.....+.-...+.+..+..|+..
T Consensus 185 TPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN----AMSALYHIAQNesPtLqs~eWS~~F~~Fvd~ 260 (948)
T KOG0577|consen 185 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----AMSALYHIAQNESPTLQSNEWSDYFRNFVDS 260 (948)
T ss_pred CccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch----HHHHHHHHHhcCCCCCCCchhHHHHHHHHHH
Confidence 99999999985 4679999999999999999999997755321 0111222222222222245677889999999
Q ss_pred hhccCCCCCCChHHHHHHhccc
Q 010340 309 CLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 309 cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
||++-|.+|||..+++.|-.-.
T Consensus 261 CLqKipqeRptse~ll~H~fv~ 282 (948)
T KOG0577|consen 261 CLQKIPQERPTSEELLKHRFVL 282 (948)
T ss_pred HHhhCcccCCcHHHHhhcchhc
Confidence 9999999999999998875433
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=336.78 Aligned_cols=249 Identities=19% Similarity=0.236 Sum_probs=199.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|.+++.||+|+||.||++++.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKE---TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CceEEEEecccCCEEEEEEEECC---CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEE
Confidence 35678889999999999999987 7888999998764322 245688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||++++.|..+.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 79 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 79 FEYVEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 99999877765543 3457999999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc-----------------
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM----------------- 286 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~----------------- 286 (512)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQL-FTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhhCCCCHHHHHhhhccchh
Confidence 2346889999999999888999999999999999999999877643111000 0000000
Q ss_pred ----ccccC------CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 287 ----DSHLE------GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 287 ----~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+... .......+..+.+|+.+||+.||++|||++++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 00111245678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-43 Score=342.55 Aligned_cols=238 Identities=20% Similarity=0.226 Sum_probs=195.9
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
+.||+|+||.||++....+..+++.||+|++...... ....+.+|++++++++||||+++++++.+++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5679999999999987644447889999999764322 23457889999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----Ccc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSY 229 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 229 (512)
+|+|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 999999996 4557999999999999999999999999 999999999999999999999999998764332 245
Q ss_pred ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHh
Q 010340 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 309 (512)
.||+.|+|||++.+..++.++|||||||++|||++|+.|+........ ...+... ...++...+..+.+|+.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET----MTMILKA--KLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHH
Confidence 689999999999888899999999999999999999988654321111 1111111 1123445567788999999
Q ss_pred hccCCCCCCChHH
Q 010340 310 LQYEPRERPNTKD 322 (512)
Q Consensus 310 l~~~p~~Rps~~~ 322 (512)
|+.||++||++.+
T Consensus 233 l~~~P~~R~~a~~ 245 (318)
T cd05582 233 FKRNPANRLGAGP 245 (318)
T ss_pred hhcCHhHcCCCCC
Confidence 9999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-43 Score=349.11 Aligned_cols=248 Identities=19% Similarity=0.160 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||.|+||.||+|.+.. +++.||||++..... .....+.+|+.+|..++||||+++++++.++...+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 78 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKD---TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYL 78 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEE
Confidence 45578889999999999999987 788999999975432 223467889999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 79 v~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 79 IMEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred EECCCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999999997 3457999999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhC
Q 010340 227 -----------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG 265 (512)
Q Consensus 227 -----------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg 265 (512)
....||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 023589999999999988999999999999999999999
Q ss_pred CCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCC---hHHHHHHh
Q 010340 266 KHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN---TKDLVSTL 327 (512)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~~vl~~L 327 (512)
..||......... ..+... ...+........++.+.++|.+|+. +|.+|++ +.+++++-
T Consensus 236 ~~Pf~~~~~~~~~-~~i~~~-~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~ 297 (364)
T cd05599 236 YPPFCSDNPQETY-RKIINW-KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP 297 (364)
T ss_pred CCCCCCCCHHHHH-HHHHcC-CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence 9887543211110 011110 0001111111345678899999996 9999997 88888874
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=306.69 Aligned_cols=258 Identities=19% Similarity=0.210 Sum_probs=211.9
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCC----
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 143 (512)
|-+.|++.+.+|+|||+-||++.... +++.+|+|++.-....+.+..++|++..++++||||++++++...+.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s---~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLS---TGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccC---cccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 34578899999999999999999776 88899999999887777889999999999999999999999876543
Q ss_pred -eeEEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeecCCCCCeeecccC
Q 010340 144 -ERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 144 -~~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
..||+++|...|+|.+.+... ++..+++.+++.|+.+|++||.+||+.. ++.||||||.|||+++.+.++|.|||.
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccC
Confidence 489999999999999999754 3457999999999999999999999986 589999999999999999999999998
Q ss_pred ccccCCC-------------CccccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchh
Q 010340 220 MKNSRDG-------------KSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 220 a~~~~~~-------------~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~ 283 (512)
+....-. .....|..|+|||.+. +...+.++|||||||+||+|+.|..||..... .+..+.
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSla 252 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLA 252 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEE
Confidence 7653311 1234588999999984 45689999999999999999999988754321 333332
Q ss_pred hhc-ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 284 HLM-DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 284 ~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
-.+ ......+-....++.+.++|++||+.||.+||++.+++..++.+.
T Consensus 253 LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 253 LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 222 212222222347788999999999999999999999999987653
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=337.46 Aligned_cols=252 Identities=20% Similarity=0.214 Sum_probs=196.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+|.+++.||.|+||.||+|.... +++.||||++....... ...+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 6 SYEKLEKLGEGSYATVYKGKSKV---NGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cceEeeeEEecCCEEEEEEEECC---CCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 46688899999999999999987 78889999997543322 346789999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~---- 225 (512)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 83 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 159 (303)
T cd07869 83 EYVH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT 159 (303)
T ss_pred ECCC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc
Confidence 9996 588888764 3456899999999999999999999999 99999999999999999999999999875332
Q ss_pred CCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc------------------
Q 010340 226 GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM------------------ 286 (512)
Q Consensus 226 ~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~------------------ 286 (512)
.....+|+.|+|||++.+. .++.++|||||||++|+|++|..||............+....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK 239 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence 1234678999999998654 478899999999999999999988754211000000000000
Q ss_pred ccccCCCCCH---------HHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 287 DSHLEGNFSS---------EEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 287 ~~~~~~~~~~---------~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
........+. ..+..+.+|+.+||+.||++|||+.++++|-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~ 290 (303)
T cd07869 240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY 290 (303)
T ss_pred cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcc
Confidence 0000000000 12346789999999999999999999998743
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=358.95 Aligned_cols=249 Identities=18% Similarity=0.191 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..|.+.+.||+|+||.||+|....+ .+..||+|.+..........+.+|+.+|+.++|||||+++++|..++..+|||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~--~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSD--PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCC--CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 3467788899999999999988762 26778999876544333456888999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 150 EYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||++||+|.+++... ...++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 999999999988532 3456899999999999999999999998 999999999999999999999999999865432
Q ss_pred -----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 227 -----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
....||+.|+|||++.+..++.++|||||||++|||++|+.|+......... ..+... .....+...+..
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~----~~~~~~-~~~~~~~~~s~~ 298 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIM----QQVLYG-KYDPFPCPVSSG 298 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhC-CCCCCCccCCHH
Confidence 2446899999999999889999999999999999999999886543211111 111111 111233445677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHH
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.+||.+||..||++||++.+++.+
T Consensus 299 ~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 299 MKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHHHhccChhhCcCHHHHHhC
Confidence 8999999999999999999998764
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=341.05 Aligned_cols=253 Identities=20% Similarity=0.255 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+|.+++.||.|+||.||++.+.. ++..+|+|++....... .+.+.+|+++++.++||||++++++|.+.+..++||
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKP---SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhheeccccCCCCEEEEEEEECC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 45678889999999999999987 77889999987653222 356899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--CC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--GK 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--~~ 227 (512)
||+++|+|.+++. ....+++..+..++.|++.||.|||+.++++|+||||+|||++.++.+||+|||++..... ..
T Consensus 83 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~ 160 (333)
T cd06650 83 EHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 160 (333)
T ss_pred ecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccc
Confidence 9999999999996 3456899999999999999999999853399999999999999999999999999875433 23
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc---c----c-------------------
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG---K----N------------------- 281 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~---~----~------------------- 281 (512)
...++..|+|||++.+..++.++|||||||++|+|++|+.|+.......... . .
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (333)
T cd06650 161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSS 240 (333)
T ss_pred cCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhh
Confidence 4568999999999998889999999999999999999998865322111100 0 0
Q ss_pred ----------hhhhcccc---cCCCCC-HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 282 ----------ILHLMDSH---LEGNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 282 ----------~~~~~~~~---~~~~~~-~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+.... .....+ ...+.++.+|+.+||+.||++|||+.+++++-.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 241 YGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred hcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 00000000 000011 123456889999999999999999999998754
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=348.56 Aligned_cols=249 Identities=22% Similarity=0.222 Sum_probs=204.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+|.+++.||+|+||.||+|.+.. +++.||||++..... .....+.+|++++..++||||+++++++.+++..++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l 78 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKD---TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYL 78 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECC---CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEE
Confidence 45678889999999999999987 788999999976432 234568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 79 v~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 79 VMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred EEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 9999999999999974 367999999999999999999999999 9999999999999999999999999987543322
Q ss_pred ---------------------------------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH
Q 010340 228 ---------------------------------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL 274 (512)
Q Consensus 228 ---------------------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~ 274 (512)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 34689999999999999999999999999999999999988764321
Q ss_pred HHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCC-hHHHHHHhc
Q 010340 275 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN-TKDLVSTLA 328 (512)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps-~~~vl~~L~ 328 (512)
.... ..+.... ...........++.+.+||.+||. ||.+||+ +.+++++..
T Consensus 236 ~~~~-~~i~~~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 236 QETY-NKIINWK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred HHHH-HHHhccC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 1110 1111100 111111112246778899999997 9999999 999998744
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=311.74 Aligned_cols=254 Identities=19% Similarity=0.192 Sum_probs=206.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC----C----hhHHHHHHHHHhcC-CCCCccceEEE
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP----D----PKQFADEAWGVGKL-RHKRLANLIGY 138 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~----~----~~~~~~E~~~l~~l-~h~niv~l~~~ 138 (512)
.|..+.--+.+|.|..++|.++..+. +++.+|+|++...... . .+...+|+.+|+++ .||+|+++.++
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~---t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKE---TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcc---cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 34444444556999999999999988 7888999998743321 1 23567899999999 79999999999
Q ss_pred EeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeeccc
Q 010340 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (512)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 218 (512)
++.+..+++|+|.|+.|.|+++|. +.-.+++....+|++|+++|+.|||.++ |+||||||+|||++++.++||+|||
T Consensus 92 yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEeccc
Confidence 999999999999999999999997 6678999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCC---ccccCcccCCcccccC------CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc
Q 010340 219 LMKNSRDGK---SYSTNLAYTPPEYLRN------GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH 289 (512)
Q Consensus 219 ~a~~~~~~~---~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
+++....+. ..+|||+|.|||.+.- ..|+...|+|++|||+|.|+.|.+||+- ..+...-..+.+- ...
T Consensus 169 Fa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH-RkQmlMLR~ImeG-kyq 246 (411)
T KOG0599|consen 169 FACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH-RKQMLMLRMIMEG-KYQ 246 (411)
T ss_pred eeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH-HHHHHHHHHHHhc-ccc
Confidence 999887765 5689999999999842 3488899999999999999999976543 2222221111111 111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+..+-..+.+..+.+||.+||+.||.+|.|++|+|+|-..
T Consensus 247 F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 247 FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 2222234567778999999999999999999999998554
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=329.37 Aligned_cols=250 Identities=21% Similarity=0.352 Sum_probs=206.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+.+.||.|+||.||+|.+.. +++.||+|++.... .....+.+|+++++.++||||+++++++...+..++|||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred HeEEeeecCCcccceEEEEEEec---CCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 34567788999999999999987 77889999987543 335678999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 999999999997545567899999999999999999999998 9999999999999999999999999987654332
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...++..|+|||.+.+..++.++|||||||++|||++ |..|++...... ....+........+...+..+.+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 236 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLEKGYRMERPEGCPPKVYE 236 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCHHHHH
Confidence 1223567999999988899999999999999999998 776665422111 11111122233444556678999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
++.+||..+|++|||+.++++.|+.+
T Consensus 237 li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 237 LMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHccCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-43 Score=343.85 Aligned_cols=240 Identities=20% Similarity=0.243 Sum_probs=198.3
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
.||+|+||.||++.... +++.||+|++...... ....+.+|++++..++||||+++++++...+..+|||||++
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 78 (325)
T cd05594 2 LLGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 78 (325)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 46999999999999887 7889999999764322 23467889999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
+|+|..++. ....+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (325)
T cd05594 79 GGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 155 (325)
T ss_pred CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccc
Confidence 999999886 44579999999999999999999997 67 99999999999999999999999999875322 224
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+.. ....++...++.+.+|+.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~----~i~~--~~~~~p~~~~~~~~~li~~ 229 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILM--EEIRFPRTLSPEAKSLLSG 229 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH----HHhc--CCCCCCCCCCHHHHHHHHH
Confidence 568999999999998899999999999999999999998875432211110 1110 1112344456678899999
Q ss_pred hhccCCCCCC-----ChHHHHHHhc
Q 010340 309 CLQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 309 cl~~~p~~Rp-----s~~~vl~~L~ 328 (512)
||+.||++|+ ++.+++++-.
T Consensus 230 ~L~~dP~~R~~~~~~~~~~il~h~~ 254 (325)
T cd05594 230 LLKKDPKQRLGGGPDDAKEIMQHKF 254 (325)
T ss_pred HhhcCHHHhCCCCCCCHHHHhcCCC
Confidence 9999999996 8999988743
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=338.96 Aligned_cols=256 Identities=19% Similarity=0.279 Sum_probs=203.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+++.||+|+||.||+|.+..... ....||||++...... ..+.+.+|+.+++.++||||++++|+|... ..++|
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v 86 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 86 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceee
Confidence 45577889999999999999765221 2345999998754322 245789999999999999999999999764 57899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 228 (512)
+||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 87 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred eecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCc
Confidence 999999999999974 3456889999999999999999999999 99999999999999999999999999986543221
Q ss_pred ------cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 229 ------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 229 ------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
..++..|+|||++.+..++.++|||||||++|||++ |+.|+....... +..+.........+..++..
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTID 239 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhCCCCCCCCCCCCHH
Confidence 223567999999998899999999999999999998 877654322111 11122222222233445567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
+.+++.+||..+|.+||++.+++..|..+...+
T Consensus 240 ~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 240 VYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 889999999999999999999999998876554
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=337.74 Aligned_cols=246 Identities=22% Similarity=0.211 Sum_probs=210.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 147 (512)
|.+...||+|.||.||+++.+. +|+.+|+|++.+..... .+.+.+|+.+|+++. |||||.++++|++...+++
T Consensus 37 Y~l~~~lG~G~Fg~v~~~~~~~---tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 37 YELGRELGRGQFGVVYLCREKS---TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred EEehhhhCCCCceEEEEEEecC---CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 4455689999999999999998 78999999998776543 358999999999997 9999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC----CCCCeeecccCcccc
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE----NGDPRLSCFGLMKNS 223 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfg~a~~~ 223 (512)
|||+|.||.|.+.+... .+++..+..++.||+.++.|||+.| |+||||||+|+|+.. ++.+|++|||++...
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 99999999999999754 3999999999999999999999999 999999999999953 357999999999887
Q ss_pred CCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc--ccCCCCCHHH
Q 010340 224 RDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS--HLEGNFSSEE 298 (512)
Q Consensus 224 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 298 (512)
... ...+||+.|+|||++....|+..+||||+||++|.|++|..||.......... .+... ..........
T Consensus 190 ~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~----~i~~~~~~f~~~~w~~i 265 (382)
T KOG0032|consen 190 KPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL----AILRGDFDFTSEPWDDI 265 (382)
T ss_pred cCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH----HHHcCCCCCCCCCcccc
Confidence 663 35689999999999998999999999999999999999998887654322211 11111 2233344566
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+..+.++|..+|..||..|+|+.++|+|-+
T Consensus 266 s~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 266 SESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred CHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 788999999999999999999999999744
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=349.21 Aligned_cols=249 Identities=18% Similarity=0.167 Sum_probs=199.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.|.+++.||+|+||.||++.+.. +++.||||++..... .....+.+|+++|..++||||+++++.+.+++.++|
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 78 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVD---TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYF 78 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEE
Confidence 46788999999999999999987 788999999875432 223568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||||+++|+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 79 v~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 79 VMDYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred EEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999999996 4567899999999999999999999999 99999999999999999999999999742210
Q ss_pred ---------------------------------------------CCccccCcccCCcccccCCCCCCCCcEEehHHHHH
Q 010340 226 ---------------------------------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLL 260 (512)
Q Consensus 226 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 260 (512)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 01246899999999999889999999999999999
Q ss_pred HHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCC---ChHHHHHHhc
Q 010340 261 DLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP---NTKDLVSTLA 328 (512)
Q Consensus 261 elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~~vl~~L~ 328 (512)
||++|+.||.......... .+.. .............+..+.++|.+|+ .+|.+|+ ++.+++++-.
T Consensus 236 ell~G~~Pf~~~~~~~~~~-~i~~-~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~ 303 (376)
T cd05598 236 EMLVGQPPFLADTPAETQL-KVIN-WETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPF 303 (376)
T ss_pred ehhhCCCCCCCCCHHHHHH-HHhc-cCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence 9999998876432211100 0000 0011111112234566778888876 5999999 8999998843
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=335.52 Aligned_cols=252 Identities=20% Similarity=0.282 Sum_probs=199.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+..|.+++.||.|+||.||+|.... ++..||+|++...... ....+.+|+.+++.++||||+++++++......++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECC---CCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 4567788999999999999999887 7888999998754322 23568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++ +|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 v~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 81 VFEYLDS-DLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EEeCCCc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 9999975 89998864 3446889999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------ccc-------------h
Q 010340 227 ---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------GKN-------------I 282 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~~-------------~ 282 (512)
....+++.|+|||++.+ ..++.++|||||||++|+|+||+.||......... +.. .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 23467899999999865 45899999999999999999999877543211100 000 0
Q ss_pred hhhcccccCC----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 283 LHLMDSHLEG----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 283 ~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.....+.... ...+..+.++.+|+.+||..||.+|||+.++++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000000 0011234568899999999999999999999976
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=346.96 Aligned_cols=250 Identities=21% Similarity=0.184 Sum_probs=203.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
+..++.+++.||+|+||.||++.... +++.||||++..... .....+.+|+.+++.++||||+++++++.++..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~ 117 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKS---SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY 117 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 34567788899999999999999987 788999999975322 223457889999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||++||+|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999999985 346889999999999999999999999 9999999999999999999999999987653
Q ss_pred CC-----CccccCcccCCcccccCC----CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 225 DG-----KSYSTNLAYTPPEYLRNG----RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 225 ~~-----~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
.. ....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....+........++
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~----~~~~i~~~~~~~~~~ 269 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----TYSKIMDHKNSLTFP 269 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH----HHHHHHcCCCcCCCC
Confidence 32 245689999999998653 37889999999999999999998876432211 111222111111122
Q ss_pred --HHHHHHHHHHHHHhhccCCCC--CCChHHHHHHhc
Q 010340 296 --SEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLA 328 (512)
Q Consensus 296 --~~~~~~~~~li~~cl~~~p~~--Rps~~~vl~~L~ 328 (512)
...+..+.+|+.+||..+|.+ |+|+.++++|-.
T Consensus 270 ~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 270 DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 235677889999999999987 999999998854
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=343.03 Aligned_cols=251 Identities=19% Similarity=0.223 Sum_probs=201.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
+.+++.||+|+||.||++....+..+++.||+|++.+... ...+.+.+|+.++..+ +||||+++++++...+..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 4578889999999999998865544788999999875322 1235688899999999 5999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999996 4567899999999999999999999999 999999999999999999999999998754221
Q ss_pred -----CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 227 -----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
....||+.|+|||++.+.. ++.++|||||||++|||+||+.||...............+. .....++...+.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 236 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL--KCDPPFPSFIGP 236 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCH
Confidence 2356899999999997654 78899999999999999999988643210000000000111 112234445667
Q ss_pred HHHHHHHHhhccCCCCCC-----ChHHHHHHh
Q 010340 301 VVFDLASRCLQYEPRERP-----NTKDLVSTL 327 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rp-----s~~~vl~~L 327 (512)
.+.+++.+||+.||++|| ++.+++++-
T Consensus 237 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 237 EAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 788999999999999999 777888774
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-44 Score=346.14 Aligned_cols=248 Identities=19% Similarity=0.249 Sum_probs=207.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.|||+||.|+||.||+++.+. ++-..|.|++........+.|.-||+||..++||+||+|++.|...+.++|+.||
T Consensus 34 WeIiGELGDGAFGKVyKA~nke---t~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKE---TKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHhhhcCccchhhhhhhccc---chhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 5689999999999999999986 6677789999877767778999999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC----CCC
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----DGK 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~----~~~ 227 (512)
|.||.+..++.. -.+.|++.++..++.|++.||.|||+++ |||||||..|||++-+|.++|+|||++-... ...
T Consensus 111 C~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRD 188 (1187)
T KOG0579|consen 111 CGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRD 188 (1187)
T ss_pred cCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhc
Confidence 999999888765 5678999999999999999999999999 9999999999999999999999999864332 235
Q ss_pred ccccCcccCCcccc-----cCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc-CCCCCHHHHHH
Q 010340 228 SYSTNLAYTPPEYL-----RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL-EGNFSSEEATV 301 (512)
Q Consensus 228 ~~~~t~~y~aPE~~-----~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 301 (512)
++.|||+|||||++ ...+|+.++||||||++|.||..+.+|- ...... .-+..+..... .-.-|+..+..
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPH-helnpM---RVllKiaKSePPTLlqPS~Ws~~ 264 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPH-HELNPM---RVLLKIAKSEPPTLLQPSHWSRS 264 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCc-cccchH---HHHHHHhhcCCCcccCcchhhhH
Confidence 78999999999987 3567999999999999999999998652 211110 11111111111 11225667788
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+|+.+||.+||..||+++++++|-.
T Consensus 265 F~DfLk~cL~Knp~~Rp~aaqll~Hpf 291 (1187)
T KOG0579|consen 265 FSDFLKRCLVKNPRNRPPAAQLLKHPF 291 (1187)
T ss_pred HHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence 999999999999999999999998743
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=337.95 Aligned_cols=242 Identities=18% Similarity=0.250 Sum_probs=196.5
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHH---hcCCCCCccceEEEEeeCCeeE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGV---GKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~ 146 (512)
.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|++++ +.++||||+++++++...+..+
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~ 78 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKK---TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC 78 (324)
T ss_pred eEEEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence 467889999999999999887 788999999975432 1234566676654 5678999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
+||||+++++|..++. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 79 lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 79 FVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 9999999999998884 457999999999999999999999999 99999999999999999999999999875322
Q ss_pred ---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 ---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ...++...+..+
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~----~~i~~~--~~~~p~~~~~~~ 228 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF----DSIVND--EVRYPRFLSREA 228 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhC--CCCCCCCCCHHH
Confidence 23456899999999999888999999999999999999999887543211111 111111 112344456678
Q ss_pred HHHHHHhhccCCCCCC-----ChHHHHHHh
Q 010340 303 FDLASRCLQYEPRERP-----NTKDLVSTL 327 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rp-----s~~~vl~~L 327 (512)
.+++.+||+.||.+|| ++.+++++-
T Consensus 229 ~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 229 ISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred HHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 8999999999999999 577777764
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=332.89 Aligned_cols=243 Identities=18% Similarity=0.238 Sum_probs=197.1
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
||+|+||.||++.+.. +++.||||++....... .+.+..|+++++.++||||+++.+++......++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (280)
T cd05608 1 LGKGGFGEVSACQMRA---TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNG 77 (280)
T ss_pred CCCCCceeEEEEEEcc---CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCC
Confidence 6999999999999987 78899999987543222 24678899999999999999999999999999999999999
Q ss_pred CCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----Cc
Q 010340 155 DTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KS 228 (512)
Q Consensus 155 g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~~ 228 (512)
|+|..++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++...... ..
T Consensus 78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccc
Confidence 9999887432 3456899999999999999999999999 999999999999999999999999998754432 23
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...............+... ...++...+..+.+++.+
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~ 234 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEA 234 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHH
Confidence 468899999999999999999999999999999999998875421110000001111111 112344566778999999
Q ss_pred hhccCCCCCC-----ChHHHHHH
Q 010340 309 CLQYEPRERP-----NTKDLVST 326 (512)
Q Consensus 309 cl~~~p~~Rp-----s~~~vl~~ 326 (512)
||+.||++|| ++++++++
T Consensus 235 ~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 235 LLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HhcCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 66777776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=336.40 Aligned_cols=248 Identities=27% Similarity=0.481 Sum_probs=196.4
Q ss_pred ccccCCCCCCCeEEEEEEc-CCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQ-DGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~-~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.+.||.|.||.||+|.+. .....+..|+||.+...... ..+.|.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4567899999999999998 44447889999999653322 246899999999999999999999999988889999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-----
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----- 226 (512)
+++|+|.++|.......+++..++.|+.||+.||.|||+++ ++|+||+++|||++.++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 99999999998654678999999999999999999999998 999999999999999999999999998776322
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
........|+|||.+.+..++.++||||||+++|||++ |+.|+.... ...+...+........+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-----NEEIIEKLKQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-----HHHHHHHHHTTEETTSBTTSBHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccceeccchhHHHHH
Confidence 22345678999999988889999999999999999999 555543321 11111111222223344556777889
Q ss_pred HHHHhhccCCCCCCChHHHHHHh
Q 010340 305 LASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L 327 (512)
++..||+.||++|||+.++++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=340.93 Aligned_cols=232 Identities=22% Similarity=0.265 Sum_probs=192.0
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.++. +++.||||++.+... ...+.+..|+.++..+ +||||+++++++...+.+++||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~ 78 (320)
T cd05590 2 VLGKGSFGKVMLARLKE---SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFV 78 (320)
T ss_pred eeeeCCCeEEEEEEEcC---CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCC
Confidence 47999999999999987 788899999975432 2245677899998877 7999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (320)
T cd05590 79 NGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST 155 (320)
T ss_pred CCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence 9999999886 4467999999999999999999999999 99999999999999999999999999875321 234
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ....+...+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~ 229 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLF----EAILND--EVVYPTWLSQDAVDILKA 229 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH----HHHhcC--CCCCCCCCCHHHHHHHHH
Confidence 56899999999999888999999999999999999999887543221111 111111 112334456678899999
Q ss_pred hhccCCCCCCCh
Q 010340 309 CLQYEPRERPNT 320 (512)
Q Consensus 309 cl~~~p~~Rps~ 320 (512)
||+.||.+||++
T Consensus 230 ~L~~dP~~R~~~ 241 (320)
T cd05590 230 FMTKNPTMRLGS 241 (320)
T ss_pred HcccCHHHCCCC
Confidence 999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=340.10 Aligned_cols=239 Identities=17% Similarity=0.218 Sum_probs=196.2
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.+.. +++.||||++..... .....+..|.+++..+ +||||+++++++...+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~ 78 (321)
T cd05591 2 VLGKGSFGKVMLAELKG---TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV 78 (321)
T ss_pred ccccCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC
Confidence 47999999999999886 778899999976432 2234577899999876 8999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... ...
T Consensus 79 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05591 79 NGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155 (321)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence 9999999886 4567899999999999999999999999 99999999999999999999999999875322 224
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ...++...+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~~~~~~~ll~~ 229 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLF----ESILHD--DVLYPVWLSKEAVSILKA 229 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHHH
Confidence 56899999999999889999999999999999999999887543221111 111111 112233455678899999
Q ss_pred hhccCCCCCC-------ChHHHHHHh
Q 010340 309 CLQYEPRERP-------NTKDLVSTL 327 (512)
Q Consensus 309 cl~~~p~~Rp-------s~~~vl~~L 327 (512)
||+.||++|| ++.+++++-
T Consensus 230 ~L~~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 230 FMTKNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred HhccCHHHcCCCCCCCCCHHHHhcCC
Confidence 9999999999 777777663
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=348.00 Aligned_cols=244 Identities=18% Similarity=0.180 Sum_probs=196.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.+++.||+|+||.||+|.... +++.||||++...... ....+.+|+.+++.++||||+++++.+.+.+.+++|
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVD---TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 79 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEE
Confidence 4578899999999999999987 7889999999764321 234688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--- 225 (512)
|||+++|+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 80 ~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 80 MDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999996 3457899999999999999999999999 99999999999999999999999999742210
Q ss_pred ------------------------------------------------CCccccCcccCCcccccCCCCCCCCcEEehHH
Q 010340 226 ------------------------------------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGT 257 (512)
Q Consensus 226 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~ 257 (512)
.....||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 01246899999999999889999999999999
Q ss_pred HHHHHHhCCCCCChhhHHHHhccchhhhcc--cccCCCCCHHHHHHHHHHHHHhhccCCCCCCC---hHHHHHH
Q 010340 258 VLLDLLSGKHIPPSHALDMIRGKNILHLMD--SHLEGNFSSEEATVVFDLASRCLQYEPRERPN---TKDLVST 326 (512)
Q Consensus 258 ~l~elltg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~~vl~~ 326 (512)
++|||++|+.||........ ...+.. ...........++.+.++|.+++ .+|.+|++ +.++++|
T Consensus 237 il~elltG~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLET----QMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHH----HHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 99999999988754321110 111111 11111112334566788888876 59999987 8888776
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-42 Score=325.48 Aligned_cols=247 Identities=21% Similarity=0.354 Sum_probs=198.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.+++.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+.++++++||||+++++++...+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~----~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR----AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec----cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 34567888999999999999886 34569999987543 33567999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++|+|.+++.. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 79 EFMENGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred EcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 99999999999864 2346899999999999999999999999 9999999999999999999999999987543322
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...++..|+|||++.+..++.++||||||+++|||++ |+.|+....... ....+........+...+..+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~ 231 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE-----VVEMISRGFRLYRPKLASMTVY 231 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCHHHH
Confidence 1234567999999988889999999999999999999 776653321111 0111111111122333456788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+++.+||+.+|.+|||+.++++.|.
T Consensus 232 ~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 232 EVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHHHHccCCcccCcCHHHHHHhhC
Confidence 9999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=330.83 Aligned_cols=244 Identities=18% Similarity=0.219 Sum_probs=195.9
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
||+|+||.||++..+. +++.||+|++...... ....+..|++++++++||||+++++++..+...++||||++|
T Consensus 1 lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g 77 (277)
T cd05607 1 LGKGGFGEVCAVQVKN---TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNG 77 (277)
T ss_pred CCCCCceEEEEEEEcc---CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCC
Confidence 6999999999999987 7889999999754322 234567799999999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---cccc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---SYST 231 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---~~~~ 231 (512)
++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++....... ...+
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCC
Confidence 99999887555567899999999999999999999999 9999999999999999999999999987654332 3467
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
+..|+|||++.+..++.++|||||||++|||++|+.|+...................... ......+..+.+|+.+||+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~ 235 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLA 235 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhc
Confidence 899999999988889999999999999999999998865321110000000111111111 1112345678899999999
Q ss_pred cCCCCCCChHHHHHH
Q 010340 312 YEPRERPNTKDLVST 326 (512)
Q Consensus 312 ~~p~~Rps~~~vl~~ 326 (512)
.||++||++.++++.
T Consensus 236 ~~P~~R~~~~~~~~~ 250 (277)
T cd05607 236 KKPEDRLGSREKNDD 250 (277)
T ss_pred cCHhhCCCCccchhh
Confidence 999999999776543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=345.19 Aligned_cols=256 Identities=20% Similarity=0.270 Sum_probs=203.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCCC-hhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 146 (512)
.+.+++.||+|+||.||+|.+.... ..+..||||++....... .+.+.+|+.+|.++. ||||++++++|.+.+..+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY 117 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence 4557788999999999999875321 134579999997544322 357899999999995 999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC-------------------------------------------------------------
Q 010340 147 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 165 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~------------------------------------------------------------- 165 (512)
|||||+++|+|.++|....
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999999886421
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCC
Q 010340 166 ---------------------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212 (512)
Q Consensus 166 ---------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 212 (512)
...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~ 276 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIV 276 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEE
Confidence 124788889999999999999999999 9999999999999999999
Q ss_pred eeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhh
Q 010340 213 RLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHL 285 (512)
Q Consensus 213 kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~ 285 (512)
||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++ |..|++....+.. ....
T Consensus 277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~----~~~~ 352 (400)
T cd05105 277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST----FYNK 352 (400)
T ss_pred EEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH----HHHH
Confidence 99999998754322 12345678999999988889999999999999999997 7777654321111 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+........+...+..+.+++.+||+.||++|||+.+|.+.|+.+.
T Consensus 353 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 353 IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1111222334456677899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-42 Score=336.78 Aligned_cols=238 Identities=20% Similarity=0.280 Sum_probs=194.0
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.+.. +++.||||+++.... ...+.+..|..++..+ +||||+++++++..++..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~ 78 (316)
T cd05592 2 VLGKGSFGKVMLAELKG---TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL 78 (316)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 47999999999999987 788899999976432 2234566777777655 8999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
+||+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~ 155 (316)
T cd05592 79 NGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155 (316)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence 9999999986 3457999999999999999999999999 99999999999999999999999999875422 224
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.. ....++...+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~----~~i~~--~~~~~~~~~~~~~~~ll~~ 229 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELF----DSILN--DRPHFPRWISKEAKDCLSK 229 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHc--CCCCCCCCCCHHHHHHHHH
Confidence 56899999999999888999999999999999999999887543221111 11111 1223344556678899999
Q ss_pred hhccCCCCCCChH-HHHHH
Q 010340 309 CLQYEPRERPNTK-DLVST 326 (512)
Q Consensus 309 cl~~~p~~Rps~~-~vl~~ 326 (512)
||+.||.+||++. +++++
T Consensus 230 ~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 230 LFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HccCCHHHcCCChHHHHcC
Confidence 9999999999875 55554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=340.92 Aligned_cols=242 Identities=18% Similarity=0.251 Sum_probs=196.1
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||++.+.. +++.||||++++..... ...+.+|+.++..+ +||||+++++++.+.+.++|||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~ 78 (329)
T cd05588 2 VIGRGSYAKVLLVELKK---TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV 78 (329)
T ss_pred eEeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence 46999999999999987 78899999998653322 34588899999998 7999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC----CCCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----DGKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~----~~~~ 228 (512)
++|+|.+++. ..+.+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++... ....
T Consensus 79 ~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (329)
T cd05588 79 SGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST 155 (329)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence 9999999886 4467999999999999999999999999 9999999999999999999999999987422 1234
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc----chh-hhcccccCCCCCHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK----NIL-HLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~ 303 (512)
..||+.|+|||++.+..++.++|||||||++|+|+||+.||........... ... .+... ....+...+..+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~ 233 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKAS 233 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHH
Confidence 5789999999999998999999999999999999999988742110000000 001 11111 1123444566788
Q ss_pred HHHHHhhccCCCCCCC------hHHHHHH
Q 010340 304 DLASRCLQYEPRERPN------TKDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps------~~~vl~~ 326 (512)
+++.+||+.||.+|++ +.++++|
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999999997 5677665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-44 Score=319.78 Aligned_cols=242 Identities=17% Similarity=0.230 Sum_probs=208.6
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
++++||+|+||.||++.++. +|+.+|||.+..+. +..++.+|+.+|++++.|+||++||.+.....++||||||-
T Consensus 37 i~~KLGEGSYGSV~KAIH~E---sG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 37 IVGKLGEGSYGSVHKAIHRE---SGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHhcCCcchHHHHHHHhc---cCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 68899999999999999998 89999999998654 67889999999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----Ccc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSY 229 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~ 229 (512)
.|++.++++- .+.+|++.++..+++..++||+|||... -||||||..|||++-+|.+||+|||+|....+. .+.
T Consensus 112 AGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV 189 (502)
T KOG0574|consen 112 AGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV 189 (502)
T ss_pred CCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence 9999999975 6778999999999999999999999988 899999999999999999999999999876553 467
Q ss_pred ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC--CCCCHHHHHHHHHHHH
Q 010340 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE--GNFSSEEATVVFDLAS 307 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~ 307 (512)
.||+.|||||++..-.|+.++||||||++..||..|++|+.. +......-++..... -..|...+.++-++++
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD-----IHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~ 264 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD-----IHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIR 264 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc-----ccccceeEeccCCCCCCCCChHhhhhHHHHHHH
Confidence 899999999999988999999999999999999999966322 111111111111111 1235567788999999
Q ss_pred HhhccCCCCCCChHHHHHHh
Q 010340 308 RCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L 327 (512)
+||.++|++|.|+-.+++|-
T Consensus 265 ~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 265 SCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred HHhcCCHHHHHHHHHHhhhh
Confidence 99999999999999998874
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=332.23 Aligned_cols=251 Identities=18% Similarity=0.200 Sum_probs=204.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
|.+++.||+|+||.||++.+.. +++.||||++....... ...+.+|+.+++.++||||+++++.+..++..++|
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 78 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcC---CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEE
Confidence 3467788999999999999876 78899999997543222 34578899999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 99999999999886544567999999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
...|++.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...+.. ....++...+..+.+|
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~l 235 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-REEVERRVKE-DQEEYSEKFSEAARSI 235 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-HHHHHHHhhh-cccccCcccCHHHHHH
Confidence 34678999999999888899999999999999999999988754221110 0111111111 1223344566778999
Q ss_pred HHHhhccCCCCCC-----ChHHHHHHhc
Q 010340 306 ASRCLQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 306 i~~cl~~~p~~Rp-----s~~~vl~~L~ 328 (512)
+.+||+.||.+|| ++.+++++-.
T Consensus 236 i~~~l~~~P~~R~~~~~~~~~~l~~~~~ 263 (285)
T cd05605 236 CRQLLTKDPGFRLGCRGEGAEEVKAHPF 263 (285)
T ss_pred HHHHccCCHHHhcCCCCCCHHHHhcCcC
Confidence 9999999999999 7888887743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=343.42 Aligned_cols=248 Identities=21% Similarity=0.194 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..+.+++.||+|+||.||++.+.. +++.||+|++.+... .....+.+|+.+++.++||||+++++++.++...+
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKS---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 457788899999999999999987 788899999875322 22345889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++|+|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 9999999999999995 346899999999999999999999999 999999999999999999999999998765432
Q ss_pred -----CccccCcccCCcccccCCC----CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC--
Q 010340 227 -----KSYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295 (512)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (512)
....||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... ....+........++
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~----~~~~i~~~~~~~~~p~~ 271 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG----TYSKIMDHKNSLNFPED 271 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH----HHHHHHhCCcccCCCCc
Confidence 2456899999999996543 7889999999999999999998876432211 112222211111222
Q ss_pred HHHHHHHHHHHHHhhccCCCC--CCChHHHHHHhc
Q 010340 296 SEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLA 328 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~--Rps~~~vl~~L~ 328 (512)
...+..+.+++.+||..++.. |+++.++++|-+
T Consensus 272 ~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 272 VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 234667889999999855543 889999999843
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=336.57 Aligned_cols=238 Identities=18% Similarity=0.238 Sum_probs=195.0
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.+.. +++.||||+++.... .....+..|..++..+ +||||+++++++.+.+..++||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 78 (316)
T cd05620 2 VLGKGSFGKVLLAELKG---KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL 78 (316)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC
Confidence 57999999999999987 788999999976432 2335577788888765 8999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05620 79 NGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155 (316)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence 9999999986 3467899999999999999999999999 99999999999999999999999999874321 234
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.. ....++...+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~li~~ 229 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF-----ESIRV-DTPHYPRWITKESKDILEK 229 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-----HHHHh-CCCCCCCCCCHHHHHHHHH
Confidence 56899999999999889999999999999999999999887643222111 11100 1122333456678899999
Q ss_pred hhccCCCCCCChH-HHHHH
Q 010340 309 CLQYEPRERPNTK-DLVST 326 (512)
Q Consensus 309 cl~~~p~~Rps~~-~vl~~ 326 (512)
||+.||.+||++. ++++|
T Consensus 230 ~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 230 LFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred HccCCHHHcCCChHHHHcC
Confidence 9999999999984 56655
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=340.59 Aligned_cols=246 Identities=18% Similarity=0.186 Sum_probs=197.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..|.+++.||+|+||.||++.+.. +++.||+|... ...+.+|+.+|++++||||+++++++......++||
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~---~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNK---TCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECC---CCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 457789999999999999999987 78889999754 245789999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~---- 225 (512)
|++. ++|..++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 163 e~~~-~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 163 PRYK-TDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred ecCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 9995 68988886 3457899999999999999999999999 99999999999999999999999999865322
Q ss_pred -CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH--------H----HHh--c-----------
Q 010340 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL--------D----MIR--G----------- 279 (512)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~--------~----~~~--~----------- 279 (512)
.....||+.|+|||++.+..++.++|||||||++|||+||+.|++.... . ... +
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 1235789999999999988999999999999999999999977653210 0 000 0
Q ss_pred cchhhhc----cccc-----CCCC--CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 280 KNILHLM----DSHL-----EGNF--SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 280 ~~~~~~~----~~~~-----~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....... .... ...+ ....+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 0000000 0000 0000 0124567889999999999999999999998744
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=339.58 Aligned_cols=243 Identities=19% Similarity=0.238 Sum_probs=195.6
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||++.+.. +++.||+|++.+..... ...+.+|+.++.++ +||||+++++++...+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 78 (329)
T cd05618 2 VIGRGSYAKVLLVRLKK---TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 78 (329)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCC
Confidence 47999999999999987 78889999998653322 34578899998877 8999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (329)
T cd05618 79 NGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 155 (329)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence 9999998886 4467999999999999999999999999 99999999999999999999999999875321 234
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc----chhhhcccccCCCCCHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK----NILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||........... .....+.. ....++...+..+.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~ 234 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSLSVKAAS 234 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc-CCCCCCCCCCHHHHH
Confidence 5689999999999998999999999999999999999988642110000000 00111100 112344556677889
Q ss_pred HHHHhhccCCCCCCCh------HHHHHH
Q 010340 305 LASRCLQYEPRERPNT------KDLVST 326 (512)
Q Consensus 305 li~~cl~~~p~~Rps~------~~vl~~ 326 (512)
++.+||+.||++||++ .++++|
T Consensus 235 ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 235 VLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999999984 566655
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=340.66 Aligned_cols=196 Identities=17% Similarity=0.193 Sum_probs=174.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-C-----CCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-H-----KRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~ 144 (512)
.|.|++.||+|+||.|.+|.+.. +++.||||+++... .-..+...|+.+|..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~---T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHK---TGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecC---CCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 35678899999999999999998 89999999998654 22456778999999996 4 479999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC--CCCCeeecccCccc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE--NGDPRLSCFGLMKN 222 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfg~a~~ 222 (512)
.|||+|.+.. +|+++|+.+....|+...++.|+.||+.||.+||+.+ |||+||||+||||.+ ...+||+|||.+..
T Consensus 263 lciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 263 LCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccc
Confidence 9999999954 9999999888888999999999999999999999999 999999999999963 44799999999987
Q ss_pred cCCC-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChh
Q 010340 223 SRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH 272 (512)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~ 272 (512)
.... .+++.+..|+|||++.|.+|+.+.||||||||+.||++|.++|+++
T Consensus 341 ~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 341 ESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 6553 3567789999999999999999999999999999999998777654
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=338.84 Aligned_cols=243 Identities=18% Similarity=0.219 Sum_probs=198.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCC-CCccceEEEEeeCCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRH-KRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~l 147 (512)
+.+++.||+|+||.||+|.... +++.||||++.+... ...+.+..|++++..+.| ++|+.+++++.+.+..++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 78 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEE
Confidence 4578889999999999999887 778899999976432 234568889999999966 568889999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||||+++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 79 v~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 79 VMEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred EEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 999999999999986 4457899999999999999999999999 99999999999999999999999999864321
Q ss_pred --CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 226 --GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+.. ....++...+..+.
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----~~~i~~--~~~~~~~~~~~~~~ 229 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL----FQSIME--HNVSYPKSLSKEAV 229 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHc--CCCCCCCCCCHHHH
Confidence 2245689999999999998999999999999999999999988654321111 111111 11233445566788
Q ss_pred HHHHHhhccCCCCCCCh-----HHHHHH
Q 010340 304 DLASRCLQYEPRERPNT-----KDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~-----~~vl~~ 326 (512)
+++.+||..||.+|++. .+++++
T Consensus 230 ~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 230 SICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 99999999999999986 556554
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=338.35 Aligned_cols=238 Identities=22% Similarity=0.253 Sum_probs=192.2
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHH-HHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.+.. +++.||||++...... ....+..|.. +++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 78 (323)
T cd05575 2 VIGKGSFGKVLLAKHKA---DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYV 78 (323)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCC
Confidence 47999999999999987 7889999999754321 2234555555 567899999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 79 NGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred CCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence 9999999986 4567899999999999999999999999 99999999999999999999999999875322 224
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ....++..+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~ 229 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMY----DNILNK--PLRLKPNISVSARHLLEG 229 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHHH
Confidence 56899999999999889999999999999999999999887543211111 111111 112233446678899999
Q ss_pred hhccCCCCCCChH----HHHHH
Q 010340 309 CLQYEPRERPNTK----DLVST 326 (512)
Q Consensus 309 cl~~~p~~Rps~~----~vl~~ 326 (512)
||+.||.+||++. +++++
T Consensus 230 ~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 230 LLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred HhhcCHHhCCCCCCCHHHHHcC
Confidence 9999999999884 55544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=325.97 Aligned_cols=249 Identities=23% Similarity=0.313 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.++++||+|+||.||+|... ++..||+|.+..... ..+.+.+|+.+++.++|+||+++++.+...+..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~----~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN----NSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec----CCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 35668899999999999999876 455699999875432 3568999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 9999999999997655667899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...++..|+|||++.+..++.++|||||||++|+|+| |..|+........ ...+............+..+.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 234 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV-----MSALQRGYRMPRMENCPDELY 234 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHH
Confidence 2234567999999988889999999999999999998 7766643221111 111111111122233556788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+++.+||..+|++||++.++++.|+.
T Consensus 235 ~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 235 DIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHHccCCcccCcCHHHHHHHHhc
Confidence 99999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=331.52 Aligned_cols=251 Identities=21% Similarity=0.268 Sum_probs=194.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcC---CCCCccceEEEEee----
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKL---RHKRLANLIGYCCD---- 141 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~niv~l~~~~~~---- 141 (512)
.|.+++.||+|+||.||+|.+... +++.||||++....... ...+.+|+.+++.+ +||||++++++|..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCC--CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 456788899999999999998542 46789999987544322 34567788877766 69999999999852
Q ss_pred -CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCc
Q 010340 142 -GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (512)
Q Consensus 142 -~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a 220 (512)
...+++||||++ ++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccce
Confidence 456899999996 58999997655567899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc----------
Q 010340 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD---------- 287 (512)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~---------- 287 (512)
+..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~-~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 158 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKILDVIGLPGEEDWPRD 236 (290)
T ss_pred EeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH-HHHHHHhCCCChhhchhh
Confidence 765432 2446789999999998888999999999999999999999776543111000 00000000
Q ss_pred -----cccC--C-----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 288 -----SHLE--G-----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 288 -----~~~~--~-----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..+. . ...+..+..+.+|+.+||+.||++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0000 0 0112345567899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=326.84 Aligned_cols=244 Identities=21% Similarity=0.258 Sum_probs=208.0
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+-+-||+|-|.+|-++++.- +|..||||++.+....+ ...+.+|++.|+.++|||||++|.+......+|||+|+
T Consensus 22 LekTlG~GHFAVVKLArHVF---TGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 22 LEKTLGRGHFAVVKLARHVF---TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred hhhhhcCCceehhhhhhhhc---ccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 33567999999999998876 89999999998765544 34789999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee-cCCCCCeeecccCccccCCCC---
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF-DENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill-~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
-++|+|+++|.+ ....+.+..+.+++.||+.|+.|||+.. +|||||||+||.+ ..-|-+||.|||++..+.++.
T Consensus 99 GD~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~ 176 (864)
T KOG4717|consen 99 GDGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT 176 (864)
T ss_pred cCCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence 999999999986 4456999999999999999999999998 9999999999987 467899999999998776653
Q ss_pred ccccCcccCCcccccCCCCCC-CCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTP-ESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~-~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
+.+|+..|-|||++.|..|+. +.||||||||||.|++|+.||..... ...+-.+++ ..-..|..++.++.+||
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND----SETLTmImD--CKYtvPshvS~eCrdLI 250 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND----SETLTMIMD--CKYTVPSHVSKECRDLI 250 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc----hhhhhhhhc--ccccCchhhhHHHHHHH
Confidence 678999999999999999865 78999999999999999987643211 122222332 22346788999999999
Q ss_pred HHhhccCCCCCCChHHHHHHhc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..||..||.+|.+.++|..+-+
T Consensus 251 ~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 251 QSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred HHHHhcCchhhccHHHHhcccc
Confidence 9999999999999999987644
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=332.03 Aligned_cols=252 Identities=21% Similarity=0.282 Sum_probs=205.9
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh-hHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
.+.++||+|-||.|.++... .+..||||+++....... ..|.+|+++|.+|+|||||.++|+|..++.++||+||
T Consensus 541 ~~~ekiGeGqFGEVhLCeve----g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVE----GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred ehhhhhcCcccceeEEEEec----CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 35678999999999999986 457899999998776553 7899999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCcc--
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY-- 229 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-- 229 (512)
+++|+|.+++..+....+.-....+|+.||+.||+||.+.+ ++||||-+.|+|+|.++++||+|||+++..-....+
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 99999999997644344455667789999999999999999 999999999999999999999999999976554433
Q ss_pred ----ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh--CCCCCChhhHHHHhccchhhhcccc---cCCCCCHHHHH
Q 010340 230 ----STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS--GKHIPPSHALDMIRGKNILHLMDSH---LEGNFSSEEAT 300 (512)
Q Consensus 230 ----~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt--g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 300 (512)
+-.+.|||||.+..+++|.++|||+||+++||+++ ...|+.....+... .+...+.+.. ....-|+-++.
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv-en~~~~~~~~~~~~~l~~P~~cp~ 774 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV-ENAGEFFRDQGRQVVLSRPPACPQ 774 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH-HhhhhhcCCCCcceeccCCCcCcH
Confidence 23478999999999999999999999999999865 45554332222211 1111222111 11234567788
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+.+++.+||..|-++||+++++...|+..
T Consensus 775 ~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 775 GLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 899999999999999999999999988753
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=326.98 Aligned_cols=249 Identities=22% Similarity=0.357 Sum_probs=207.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+++.||.|+||.||+|.+. .++.+|+|++..........+.+|+.+++.++||||+++++++.+....++|||
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWK----NRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred HHHHhhhhccCCCccEEEeEec----CCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 3557788999999999999997 456799999987665456789999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~ 161 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS 161 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence 999999999998655667899999999999999999999999 9999999999999999999999999987654321
Q ss_pred -ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
...++..|++||.+.+..++.++||||||+++|+|++ |+.|+...... .....+........+..++..+.++
T Consensus 162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (261)
T cd05148 162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-----EVYDQITAGYRMPCPAKCPQEIYKI 236 (261)
T ss_pred cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHHhCCcCCCCCCCCHHHHHH
Confidence 2234567999999988889999999999999999998 67665432111 1111111222233445666778999
Q ss_pred HHHhhccCCCCCCChHHHHHHhcc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+.+||..||.+|||+.++++.|+.
T Consensus 237 i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 237 MLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHHHcCCCchhCcCHHHHHHHHhc
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=329.26 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=204.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+||.||+|..... ..+++.||||.+...... ..+.+.+|+++++.++||||+++++++......++
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 85 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIM 85 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEE
Confidence 355778899999999999987643 125678999999865543 24679999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeee
Q 010340 148 VAEYMPNDTLAKHLFHWE------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 215 (512)
||||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEEC
Confidence 999999999999996432 245789999999999999999999999 9999999999999999999999
Q ss_pred cccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhccc
Q 010340 216 CFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 216 Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
|||++...... ....+++.|+|||++.+..++.++|||||||++|||++ |..|+....... ....+..
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-----~~~~~~~ 239 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-----VIECITQ 239 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHc
Confidence 99998754321 22334678999999999999999999999999999998 887765432111 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
......+...+..+.+++.+||..||++||++.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1122233445677899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=324.66 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=203.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+.+.||+|+||.||+|.+.....+...||||.+....... ...|.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 85 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence 345677899999999999987643345689999987644322 3568899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++.......
T Consensus 86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (266)
T cd05033 86 YMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163 (266)
T ss_pred cCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence 9999999999964 3457899999999999999999999998 9999999999999999999999999988764211
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+....... ....+........+..++..+.
T Consensus 164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~ 238 (266)
T cd05033 164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-----VIKAVEDGYRLPPPMDCPSALY 238 (266)
T ss_pred eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHHH
Confidence 1223567999999988889999999999999999998 876654322111 1111111112223345567789
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+++.+||+.+|++||++.+++++|..+
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=336.72 Aligned_cols=243 Identities=18% Similarity=0.210 Sum_probs=198.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
+.+++.||+|+||.||+|.+.. +++.||||++.+.... ..+.+..|..++..+ .|++|+++++++...+..++
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYF 78 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEE
Confidence 4567889999999999999987 7788999999864322 234567788888877 68999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 79 v~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 79 VMEYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred EEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999999999986 4457899999999999999999999999 99999999999999999999999999875322
Q ss_pred --CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 226 --GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+.. ....++...+..+.
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~----~~~i~~--~~~~~p~~~s~~~~ 229 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIME--HNVAYPKSMSKEAV 229 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH----HHHHHh--CCCCCCCcCCHHHH
Confidence 2345689999999999999999999999999999999999988754322111 111111 11233445667788
Q ss_pred HHHHHhhccCCCCCCCh-----HHHHHH
Q 010340 304 DLASRCLQYEPRERPNT-----KDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~-----~~vl~~ 326 (512)
+++.+||+.||.+|++. .+++++
T Consensus 230 ~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 230 AICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 99999999999999985 555544
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-42 Score=334.98 Aligned_cols=238 Identities=20% Similarity=0.270 Sum_probs=194.5
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.+.. +++.||||++..... .....+..|..++..+ +||||+++++++.+.+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~ 78 (316)
T cd05619 2 MLGKGSFGKVFLAELKG---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYL 78 (316)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 57999999999999987 788899999986532 2234577788888765 9999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05619 79 NGGDLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155 (316)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceee
Confidence 9999999996 3457899999999999999999999999 99999999999999999999999999875321 234
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.. ....++...+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-----~~~i~~-~~~~~~~~~~~~~~~li~~ 229 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL-----FQSIRM-DNPCYPRWLTREAKDILVK 229 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHh-CCCCCCccCCHHHHHHHHH
Confidence 5689999999999988899999999999999999999988654321111 111110 1122334456678899999
Q ss_pred hhccCCCCCCChH-HHHHH
Q 010340 309 CLQYEPRERPNTK-DLVST 326 (512)
Q Consensus 309 cl~~~p~~Rps~~-~vl~~ 326 (512)
||+.||.+||++. +++++
T Consensus 230 ~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 230 LFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HhccCHhhcCCChHHHHcC
Confidence 9999999999997 66554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=325.63 Aligned_cols=248 Identities=18% Similarity=0.236 Sum_probs=202.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.++.+++.||+|+||.||+|.... +++.||+|++..........+.+|+.+++.++||||+++++++...+..++||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~---~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLH---TGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECC---CCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 457788999999999999999877 78889999997655444567889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06646 86 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK 162 (267)
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence 9999999999986 3457899999999999999999999998 999999999999999999999999998754322
Q ss_pred -CccccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC---CCCHHHH
Q 010340 227 -KSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG---NFSSEEA 299 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 299 (512)
....+++.|+|||.+. ...++.++|||||||++|||++|+.|+....... . ...+....... ......+
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-A---LFLMSKSNFQPPKLKDKTKWS 238 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh-h---heeeecCCCCCCCCccccccC
Confidence 2346788999999984 3457889999999999999999997764321110 0 00110111110 1112345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..+.+++.+||..+|++|||+++++++|
T Consensus 239 ~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 239 STFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 6788999999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=330.29 Aligned_cols=257 Identities=24% Similarity=0.329 Sum_probs=206.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+.+.||+|+||.||+|..... ..++..+++|.+........+.+.+|+.++++++||||+++++++......++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 455677899999999999986532 125567999998765544456799999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCee
Q 010340 149 AEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 214 (512)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.++|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEE
Confidence 99999999999996422 234899999999999999999999999 999999999999999999999
Q ss_pred ecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcc
Q 010340 215 SCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMD 287 (512)
Q Consensus 215 ~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 287 (512)
+|||++...... ....++..|+|||.+.+..++.++|||||||++|||+| |..|+....... ....+.
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~ 239 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-----VIECIT 239 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHh
Confidence 999998754332 22345678999999988889999999999999999999 876654322111 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 288 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.......+...+..+.+++.+||+.+|.+|||+.++++.|..+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 240 QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111222334566788999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=328.14 Aligned_cols=255 Identities=25% Similarity=0.373 Sum_probs=202.7
Q ss_pred CCcccccccCCCCCCCeEEEEEEcC-CCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
++++.+++.||+|+||.||+|.+.. +...++.||+|.+....... ...+.+|+.+++.++||||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 3456678899999999999998643 12256789999997543222 356889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWE---------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
+||||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++|+||||+|||++.++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCc
Confidence 9999999999999985321 235788999999999999999999999 999999999999999999
Q ss_pred CeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhh
Q 010340 212 PRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILH 284 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~ 284 (512)
+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++ |..|+...... .+.+
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~-----~~~~ 237 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ-----EVIE 237 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH
Confidence 999999998754322 22334667999999988889999999999999999998 77665432111 1111
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+........+..++..+.+++.+||+.||.+||++.+|+++|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111222334456778899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=339.27 Aligned_cols=249 Identities=20% Similarity=0.285 Sum_probs=194.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeC-----Ce
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG-----DE 144 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 144 (512)
|.+++.||+|+||.||+|.+.. +++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTH---TGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECC---CCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCce
Confidence 4577889999999999999887 788999999875322 2235688999999999999999999998643 24
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 79 ~~lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 799999995 68999886 4456999999999999999999999999 9999999999999999999999999987542
Q ss_pred CC-------CccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-------------------
Q 010340 225 DG-------KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM------------------- 276 (512)
Q Consensus 225 ~~-------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~------------------- 276 (512)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.......
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 21 23468999999999865 578999999999999999999998765321100
Q ss_pred Hhccchhhh---cccccCCCCC---HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 277 IRGKNILHL---MDSHLEGNFS---SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 277 ~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
......... +.......+. +..++.+.+++.+||+.||++|||+.+++++-
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 000000000 0000000000 12345678999999999999999999999873
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=322.33 Aligned_cols=243 Identities=20% Similarity=0.265 Sum_probs=197.0
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
+||+|+||.||+|.+.... +++.+|+|++....... .+.+.+|+.+++.++||||+++++++. ....++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKK-SEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCC-CceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 5799999999999765322 67889999987554322 357899999999999999999999985 4567899999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-------
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------- 227 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------- 227 (512)
|+|.+++. ....+++..+..++.|++.||.|||+++ ++||||||.|||++.++.+||+|||++.......
T Consensus 80 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 80 GPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 99999996 3457899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
...++..|+|||++....++.++|||||||++|||++ |..||...... .....+........+...++.+.++|
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-----EVTQMIESGERMECPQRCPPEMYDLM 231 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHCCCCCCCCCCCCHHHHHHH
Confidence 1123578999999988889999999999999999998 88765432111 11222222223344555677899999
Q ss_pred HHhhccCCCCCCChHHHHHHhcc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+||+.||++||++.+|.+.|+.
T Consensus 232 ~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 232 KLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHhccCchhCcCHHHHHHHHhc
Confidence 99999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=336.92 Aligned_cols=256 Identities=20% Similarity=0.292 Sum_probs=201.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEee-CCee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCD-GDER 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~~~ 145 (512)
.+.+++.||.|+||.||+|..... ..+++.||+|++....... .+.+.+|+.++.++ +|+||++++++|.. +..+
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 456788999999999999976431 2256789999987543222 34678899999999 89999999998865 4568
Q ss_pred EEEEEccCCCCHHhhhhhcC-----------------------------------------------------------C
Q 010340 146 LLVAEYMPNDTLAKHLFHWE-----------------------------------------------------------N 166 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~-----------------------------------------------------------~ 166 (512)
+++|||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999985321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC------CccccCcccCCccc
Q 010340 167 QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEY 240 (512)
Q Consensus 167 ~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~ 240 (512)
..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++...... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 36899999999999999999999998 999999999999999999999999999765322 12344678999999
Q ss_pred ccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 010340 241 LRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN 319 (512)
Q Consensus 241 ~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps 319 (512)
+.+..++.++|||||||++|||++ |..|+....... .....+........+...++.+.+++.+||+.+|++||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE----EFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH----HHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 887654321110 011111111122223345567899999999999999999
Q ss_pred hHHHHHHhcccc
Q 010340 320 TKDLVSTLAPLQ 331 (512)
Q Consensus 320 ~~~vl~~L~~~~ 331 (512)
+.+++++|..+.
T Consensus 323 ~~ell~~l~~~~ 334 (337)
T cd05054 323 FSELVEILGDLL 334 (337)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=321.49 Aligned_cols=242 Identities=24% Similarity=0.373 Sum_probs=196.3
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||+|+||.||+|.+.. +++.||+|.+......+ ...+.+|+++++.++||||++++++|......++||||++++
T Consensus 2 ~lg~g~~g~vy~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 2 RIGRGNFGEVFSGRLRA---DNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred ccCcccCccEEEEEEec---CCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 57999999999999987 78889999886543222 356999999999999999999999999999999999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc------c
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS------Y 229 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------~ 229 (512)
+|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++........ .
T Consensus 79 ~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 79 DFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred cHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 99999964 3446899999999999999999999999 99999999999999999999999999875433211 1
Q ss_pred ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..+..|+|||.+.++.++.++|||||||++|||++ |..|+..... ......+........+...+..+.+++.+
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 231 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQTREAIEQGVRLPCPELCPDAVYRLMER 231 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCCcccCCHHHHHHHHH
Confidence 12356999999988889999999999999999998 6654432111 11111111122223444556778999999
Q ss_pred hhccCCCCCCChHHHHHHhc
Q 010340 309 CLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 309 cl~~~p~~Rps~~~vl~~L~ 328 (512)
||+.+|++|||+.++++.|+
T Consensus 232 ~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 232 CWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HcCCChhhCcCHHHHHHHHh
Confidence 99999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=327.07 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=202.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+..+.++||+|+||.||++.... ...++..+|+|.+..........+.+|+++++.++|+||+++++++.+....++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 445578899999999999997542 122567899999876554445679999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCee
Q 010340 148 VAEYMPNDTLAKHLFHWEN-------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 214 (512)
||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++|+||||+|||+++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~kL 163 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVKI 163 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEEE
Confidence 9999999999999964321 35889999999999999999999999 999999999999999999999
Q ss_pred ecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcc
Q 010340 215 SCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMD 287 (512)
Q Consensus 215 ~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 287 (512)
+|||++...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..|+....... ......
T Consensus 164 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~ 238 (280)
T cd05092 164 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-----AIECIT 238 (280)
T ss_pred CCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-----HHHHHH
Confidence 999998754322 12234678999999998899999999999999999998 776553321111 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 288 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.......+..+++.+.+|+.+||+.||.+||++.+|++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 239 QGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred cCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11112233445667889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-42 Score=334.72 Aligned_cols=238 Identities=20% Similarity=0.257 Sum_probs=197.0
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.+.. +++.||||++.+... .....+.+|+.++..+ +||||+++++++...+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 78 (318)
T cd05570 2 VLGKGSFGKVLLAELKG---TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV 78 (318)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 47999999999999987 778899999986432 2245678899999888 7999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|..++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (318)
T cd05570 79 NGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST 155 (318)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence 9999999886 4457999999999999999999999999 99999999999999999999999999864321 223
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|+|++|+.||......... ..+... ...++...+..+.+|+.+
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~ 229 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELF----QSILED--EVRYPRWLSKEAKSILKS 229 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHH----HHHHcC--CCCCCCcCCHHHHHHHHH
Confidence 46899999999999999999999999999999999999887543211111 111111 112344456778899999
Q ss_pred hhccCCCCCCCh-----HHHHHH
Q 010340 309 CLQYEPRERPNT-----KDLVST 326 (512)
Q Consensus 309 cl~~~p~~Rps~-----~~vl~~ 326 (512)
||..||.+||++ .+++++
T Consensus 230 ~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 230 FLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HccCCHHHcCCCCCCCHHHHhcC
Confidence 999999999999 888776
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=335.61 Aligned_cols=235 Identities=23% Similarity=0.246 Sum_probs=190.1
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHH-HHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.+.. +++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~ 78 (325)
T cd05602 2 VIGKGSFGKVLLARHKA---EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 78 (325)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCC
Confidence 57999999999999987 778899999875432 12234444544 567889999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 79 NGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence 9999999996 4566888999999999999999999999 99999999999999999999999999875322 234
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|+|++|+.||......... ..+... ....++..+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~ 229 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY----DNILNK--PLQLKPNITNSARHLLEG 229 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHH----HHHHhC--CcCCCCCCCHHHHHHHHH
Confidence 56899999999999989999999999999999999999887543221111 111111 112334456678899999
Q ss_pred hhccCCCCCCChHHH
Q 010340 309 CLQYEPRERPNTKDL 323 (512)
Q Consensus 309 cl~~~p~~Rps~~~v 323 (512)
||+.||.+||++.+.
T Consensus 230 ~l~~~p~~R~~~~~~ 244 (325)
T cd05602 230 LLQKDRTKRLGAKDD 244 (325)
T ss_pred HcccCHHHCCCCCCC
Confidence 999999999988743
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=322.72 Aligned_cols=254 Identities=16% Similarity=0.194 Sum_probs=207.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+.+.||.|+||.||+|.... +++.||||.+......+ ...+.+|+++++.++||||+++++++...+..++
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLL---DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNI 79 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeC---CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEE
Confidence 45677889999999999999887 77889999886533222 2468899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 148 VAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
||||+++++|.+++... ....+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999999988532 2355899999999999999999999998 99999999999999999999999999876543
Q ss_pred CC----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc-cCCCCCHHHHH
Q 010340 226 GK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH-LEGNFSSEEAT 300 (512)
Q Consensus 226 ~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 300 (512)
.. ...+++.|+|||.+.+..++.++||||||+++|||++|+.|+.....+... ....+... .....+...+.
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS---LCQKIEQCDYPPLPTEHYSE 235 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH---HHHHHhcCCCCCCChhhcCH
Confidence 22 346788999999998888999999999999999999999886543211111 11111111 11122234567
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+.+++.+||..+|++||++.++++.|+.++
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 7899999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=327.96 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+.+.++++||.|+||.||+|.+..+ ...++.||||+++...... .+.+.+|+.++..++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 4466788999999999999987642 1246789999998554322 356889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhc--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCC
Q 010340 147 LVAEYMPNDTLAKHLFHW--------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 212 (512)
+++||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCce
Confidence 999999999999998521 1235888999999999999999999999 9999999999999999999
Q ss_pred eeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhh
Q 010340 213 RLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHL 285 (512)
Q Consensus 213 kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~ 285 (512)
||+|||+++...... ...+++.|+|||.+.++.++.++|||||||++|||++ |..|+..... ......
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~ 238 (283)
T cd05091 164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVIEM 238 (283)
T ss_pred EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Confidence 999999987643321 2334678999999988889999999999999999998 5544432211 111222
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+........+..++..+.+|+.+||+.+|.+||++.+|+..|+.
T Consensus 239 i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 239 IRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 21222223345567778999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=321.57 Aligned_cols=248 Identities=24% Similarity=0.346 Sum_probs=202.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+.+++.||.|+||.||+|.+. +++.||||.+..... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~----~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWN----NTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred heeeEEEecccCCccEEEEEec----CCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 3557788999999999999975 446799999876542 35679999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--c
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--S 228 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~ 228 (512)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05068 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA 160 (261)
T ss_pred cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence 999999999997544457899999999999999999999999 9999999999999999999999999987654321 1
Q ss_pred ccc---CcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 229 YST---NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 229 ~~~---t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
..+ +..|+|||++.+..++.++||||||+++|||+| |+.|+....... ....+........+...+..+.+
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 235 (261)
T cd05068 161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-----VLQQVDQGYRMPCPPGCPKELYD 235 (261)
T ss_pred cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHHH
Confidence 122 357999999988889999999999999999999 776654321111 11111111122233455677899
Q ss_pred HHHHhhccCCCCCCChHHHHHHhcc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++.+||+.+|.+||++.++++.|+.
T Consensus 236 li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 236 IMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHhhcCcccCCCHHHHHHHHhc
Confidence 9999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=341.03 Aligned_cols=245 Identities=17% Similarity=0.141 Sum_probs=196.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||++.... +++.||||++..... .....+.+|+.++..++||||+++++.+.+.+.++|
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l 78 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKD---TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYL 78 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 34577889999999999999987 788999999975332 223568889999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 79 v~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 79 IMEFLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred EEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999996 4567999999999999999999999999 999999999999999999999999998643211
Q ss_pred --------------------------------------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCC
Q 010340 227 --------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHI 268 (512)
Q Consensus 227 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~ 268 (512)
....||+.|+|||++.+..++.++|||||||++|||+||+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 124689999999999999999999999999999999999988
Q ss_pred CChhhHHHHhccchhhhcccccCCCCCH--HHHHHHHHHHHHhhccCCCCCCC---hHHHHHH
Q 010340 269 PPSHALDMIRGKNILHLMDSHLEGNFSS--EEATVVFDLASRCLQYEPRERPN---TKDLVST 326 (512)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rps---~~~vl~~ 326 (512)
|......... ..+........+++ ..+..+.++|.+++. ||.+|++ +.++++|
T Consensus 236 f~~~~~~~~~----~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 236 FCSETPQETY----RKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCHHHHH----HHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 7543221111 11111000011111 245567889988774 9999985 5666665
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=338.58 Aligned_cols=247 Identities=19% Similarity=0.154 Sum_probs=200.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||++.... +++.||||+++.... ...+.+.+|+.++..++||||+++++++.+....+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~l 78 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKA---TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYL 78 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEE
Confidence 35577889999999999999987 788999999986533 123568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 79 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 79 VMEYQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred EECCCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999999974 3357999999999999999999999999 9999999999999999999999999997654322
Q ss_pred -----ccccCcccCCccccc------CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc--cCCCC
Q 010340 228 -----SYSTNLAYTPPEYLR------NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH--LEGNF 294 (512)
Q Consensus 228 -----~~~~t~~y~aPE~~~------~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 294 (512)
...||+.|+|||++. +..++.++|||||||++|||++|+.||........ ...+.... .....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~ 232 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT----YNNIMNFQRFLKFPE 232 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH----HHHHHcCCCccCCCC
Confidence 236899999999986 45678999999999999999999988754321111 11111111 11111
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
....+..+.+|+.+||. +|.+|||+.+++++-
T Consensus 233 ~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~ 264 (330)
T cd05601 233 DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP 264 (330)
T ss_pred CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence 12345678899999998 999999999998874
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=343.82 Aligned_cols=244 Identities=20% Similarity=0.183 Sum_probs=193.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.+++.||.|+||.||++.+.. .++.||||... ...+.+|+++|++|+|+|||++++++..++..++|||+
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~---~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPD---YPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECC---CCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 5677889999999999999987 67889999643 23467899999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-----
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----- 226 (512)
+. ++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 242 ~~-~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 318 (461)
T PHA03211 242 YR-SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPF 318 (461)
T ss_pred cC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceeccccccccc
Confidence 95 689888864 3457999999999999999999999999 999999999999999999999999998764322
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH------------HHHhccchh-hhccc----
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL------------DMIRGKNIL-HLMDS---- 288 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~------------~~~~~~~~~-~~~~~---- 288 (512)
....||+.|+|||++.+..++.++|||||||+||||++|..+++.... ..+...... ..+..
T Consensus 319 ~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~ 398 (461)
T PHA03211 319 HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGS 398 (461)
T ss_pred ccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcch
Confidence 134689999999999998999999999999999999998865443210 000000000 00000
Q ss_pred ------------ccCCC-----CC--HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 289 ------------HLEGN-----FS--SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 289 ------------~~~~~-----~~--~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..... +. ......+.+||.+||+.||.+|||+.|+|++-
T Consensus 399 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp 456 (461)
T PHA03211 399 RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP 456 (461)
T ss_pred HHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence 00000 00 01234678999999999999999999999873
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=321.39 Aligned_cols=246 Identities=23% Similarity=0.341 Sum_probs=198.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+++.||+|+||.||++.+.. +..+|||.+.... ...+.+.+|+.++..++||||+++++++......++|||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~----~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRG----QYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HeEEeeEecCcccceEEEEEecC----CCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 45678899999999999998763 3459999987543 335679999999999999999999999999889999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++|+|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 80 YMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred cCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 99999999999642 337899999999999999999999999 9999999999999999999999999987543322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...++..|++||++.+..++.++|||||||++|+|++ |..|+........ ...+........+...+..+.+
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET-----VEKVSQGLRLYRPHLASEKVYA 232 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH-----HHHHhcCCCCCCCCCCCHHHHH
Confidence 1234567999999988889999999999999999999 7766543211111 1111111111222334567899
Q ss_pred HHHHhhccCCCCCCChHHHHHHhc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
++.+||+.+|.+||++.++++.|+
T Consensus 233 li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 233 IMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=334.72 Aligned_cols=253 Identities=20% Similarity=0.340 Sum_probs=221.9
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
.-.+||-|.||.||.|.|+. -...||||.++.+.. ..++|..|+.+|+.++|||+|+|+|+|..+..+|||+|||.
T Consensus 271 MkhKLGGGQYGeVYeGvWKk---yslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred eeeccCCCcccceeeeeeec---cceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 34578999999999999998 667799999987653 46889999999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCcc--cc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY--ST 231 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~ 231 (512)
.|+|.++|+......++.-..+.++.||..|+.||..++ +|||||-..|.|++++..+||+|||+++++...+.. .|
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAG 425 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAG 425 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccC
Confidence 999999999877778888889999999999999999999 999999999999999999999999999987654422 23
Q ss_pred ---CcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 232 ---NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 232 ---t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
.+.|.|||-+....++.|+|||+|||+|||+.| |..|+++ +...++..++....+.+-|..|++.+.+|+.
T Consensus 426 AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-----idlSqVY~LLEkgyRM~~PeGCPpkVYeLMr 500 (1157)
T KOG4278|consen 426 AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-----IDLSQVYGLLEKGYRMDGPEGCPPKVYELMR 500 (1157)
T ss_pred ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC-----ccHHHHHHHHhccccccCCCCCCHHHHHHHH
Confidence 467999999999999999999999999999988 5555554 3444566677777777888999999999999
Q ss_pred HhhccCCCCCCChHHHHHHhccccCCCCC
Q 010340 308 RCLQYEPRERPNTKDLVSTLAPLQNRPDV 336 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~~~~~~~~~ 336 (512)
.||+.+|.+||++.|+.+.|+.+-....+
T Consensus 501 aCW~WsPsDRPsFaeiHqafEtmf~~sSi 529 (1157)
T KOG4278|consen 501 ACWNWSPSDRPSFAEIHQAFETMFSSSSI 529 (1157)
T ss_pred HHhcCCcccCccHHHHHHHHHHHhccccc
Confidence 99999999999999999999877654433
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=327.93 Aligned_cols=257 Identities=25% Similarity=0.322 Sum_probs=204.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+.+.||+|+||.||++..... ..++..+|+|.+........+.+.+|++++.+++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 85 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 445777889999999999986432 124567999998765433456799999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 149 AEYMPNDTLAKHLFHWE-----------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+||
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccC
Confidence 99999999999996421 235899999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhccccc
Q 010340 218 GLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHL 290 (512)
Q Consensus 218 g~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (512)
|+++..... ....++..|+|||++.+..++.++|||||||++|+|++ |..|+........ ...+....
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~-----~~~i~~~~ 239 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-----IECITQGR 239 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCC
Confidence 998754322 12234678999999988889999999999999999999 7766543221111 01111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 291 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
....+...+..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 240 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 240 VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1112233456789999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=331.83 Aligned_cols=233 Identities=21% Similarity=0.257 Sum_probs=189.0
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHH-HHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.+.. +++.||+|++.+.... ....+..|.. +++.++||||+++++++.+.+..++||||+
T Consensus 2 ~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (321)
T cd05603 2 VIGKGSFGKVLLAKRKS---DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYV 78 (321)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCC
Confidence 57999999999999987 7889999998754321 1234555554 678899999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|...+. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 79 NGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence 9999998886 3466889999999999999999999999 99999999999999999999999999875322 224
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|..||......... ..+... ...++...+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~ 229 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMY----DNILHK--PLQLPGGKTVAACDLLVG 229 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHH----HHHhcC--CCCCCCCCCHHHHHHHHH
Confidence 56899999999998888999999999999999999999887543211111 111111 122344456678899999
Q ss_pred hhccCCCCCCChH
Q 010340 309 CLQYEPRERPNTK 321 (512)
Q Consensus 309 cl~~~p~~Rps~~ 321 (512)
||+.||.+||++.
T Consensus 230 ~l~~~p~~R~~~~ 242 (321)
T cd05603 230 LLHKDQRRRLGAK 242 (321)
T ss_pred HccCCHhhcCCCC
Confidence 9999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=338.72 Aligned_cols=251 Identities=20% Similarity=0.172 Sum_probs=200.3
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
....+.+++.||+|+||.||++.+.. +++.||+|++..... .....+.+|+.++..++||||+++++.+.++..
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKS---TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECC---CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 34567788999999999999999987 788999999865322 123457889999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+++|+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 999999999999999985 345889999999999999999999999 9999999999999999999999999987654
Q ss_pred CC-----CccccCcccCCcccccCCC----CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc--cCCC
Q 010340 225 DG-----KSYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH--LEGN 293 (512)
Q Consensus 225 ~~-----~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 293 (512)
.. ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... ....+.... +...
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~ 269 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----TYSKIMNHKNSLTFP 269 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH----HHHHHHcCCCcccCC
Confidence 32 2456899999999986543 7889999999999999999998876432111 111111111 1111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCC--CCChHHHHHHhcc
Q 010340 294 FSSEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLAP 329 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~--Rps~~~vl~~L~~ 329 (512)
.....+..+.++|.+||..++.+ |+++.+++++...
T Consensus 270 ~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 270 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence 12345667889999999844433 7899999988643
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=329.12 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=212.6
Q ss_pred ccCCCCCCCeEEEEEEcCCC-CCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 76 SESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
..||.|.||.||+|+..... ...--||||..+.+...+ .+.|..|.-+|+.++||||++++|+|.+. ..|||||+++
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~~ 473 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELAP 473 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEeccc
Confidence 36799999999999987642 234469999998865443 57899999999999999999999999864 5899999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCcccc--
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-- 231 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-- 231 (512)
-|.|..+|+. ....++......++.||+.||.|||+.+ +|||||-.+|||+...-.+||+|||+++-..+...+..
T Consensus 474 ~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~ 551 (974)
T KOG4257|consen 474 LGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR 551 (974)
T ss_pred chhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhccc
Confidence 9999999975 5567899999999999999999999999 99999999999999999999999999998776654332
Q ss_pred ---CcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 232 ---NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 232 ---t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
.+.|||||.+....++.+||||.|||.+||++. |..||.+ ..+..+.--+...-+.+.|+.|++.+..|+.
T Consensus 552 ~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslms 626 (974)
T KOG4257|consen 552 GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLMS 626 (974)
T ss_pred cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHHH
Confidence 356999999999999999999999999999876 6667654 3445555555556667788999999999999
Q ss_pred HhhccCCCCCCChHHHHHHhcccc
Q 010340 308 RCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+||+.+|.+||++.++...|..+.
T Consensus 627 kcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 627 KCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred HHhccCcccCCcHHHHHHHHHHHH
Confidence 999999999999999999887654
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=323.98 Aligned_cols=244 Identities=25% Similarity=0.366 Sum_probs=195.8
Q ss_pred cCCCCCCCeEEEEEEcCCCC----CceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGND----NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||.|+||.||+|....... ....||+|.+........+.+..|+.+++.++||||+++++++..+...++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 57999999999998865221 23458889887554444567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC--------CeeecccCccccC
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD--------PRLSCFGLMKNSR 224 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Dfg~a~~~~ 224 (512)
++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99999999964 2346899999999999999999999999 999999999999987765 5999999987766
Q ss_pred CCCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 225 DGKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 225 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
......+++.|+|||++.+. .++.++|||||||++|||++|..+|+....... ....... ....+......+.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~ 233 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK----KLQFYED--RHQLPAPKWTELA 233 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH----HHHHHHc--cccCCCCCcHHHH
Confidence 65667788999999999764 579999999999999999999655443211111 0111111 1123333446688
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+++.+||+.||++|||++++++.|+
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHhcC
Confidence 9999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=324.01 Aligned_cols=255 Identities=18% Similarity=0.242 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+++.||+|+||.||+|.+..... ....|++|.+...... ....+..|+.++.+++||||+++++++.. ...++|
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 34577889999999999999865211 1235888888643321 23567888889999999999999999864 557899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
+||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 87 TQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred EEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 999999999999964 3457899999999999999999999999 999999999999999999999999998764322
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
....++..|++||++.++.++.++|||||||++|||++ |..|+....... ..+++........+..++..
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-----VPDLLEKGERLAQPQICTID 239 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCCCcCCCCCCCCHH
Confidence 12345678999999988889999999999999999998 886654321111 11112111111222334556
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+.+++.+||..||++|||+.++++.|..+...
T Consensus 240 ~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 240 VYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 78899999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=327.51 Aligned_cols=249 Identities=16% Similarity=0.242 Sum_probs=206.4
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
...+.+++.||.|+||.||+|.+.. +++.||+|.+........+.+.+|+.+++.++||||+++++.+..+...++|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECC---CCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 3456778889999999999999876 7788999999876665667899999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 96 ~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 96 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred ecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999999999984 346899999999999999999999999 999999999999999999999999988754332
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||......... .............+...+..+.+
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~ 248 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL---YLIATNGTPELQNPEKLSAIFRD 248 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH---HHHhcCCCCCCCCccccCHHHHH
Confidence 2346788999999998888999999999999999999999887543211100 00111111111223455667889
Q ss_pred HHHHhhccCCCCCCChHHHHHHh
Q 010340 305 LASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L 327 (512)
++.+||..+|++||++.+++++-
T Consensus 249 li~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 249 FLNRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred HHHHHCcCCcccCcCHHHHhhCh
Confidence 99999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=326.27 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=204.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
+.+++.||+|+||.||++...... .....+|+|.+...... ....+.+|+.++.++ +|+||+++++++...+..++
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 93 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV 93 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence 456788899999999999886532 24578999998754321 234688999999999 89999999999999999999
Q ss_pred EEEccCCCCHHhhhhhc--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCe
Q 010340 148 VAEYMPNDTLAKHLFHW--------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 213 (512)
||||+++|+|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+|
T Consensus 94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEE
Confidence 99999999999999642 2456899999999999999999999998 99999999999999999999
Q ss_pred eecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhc
Q 010340 214 LSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLM 286 (512)
Q Consensus 214 l~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~ 286 (512)
|+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..|+....... ....+
T Consensus 173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~ 247 (293)
T cd05053 173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-----LFKLL 247 (293)
T ss_pred eCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-----HHHHH
Confidence 99999987654322 1224567999999988889999999999999999998 776654322111 11111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
........+...+..+.+|+.+||..||++|||+.++++.|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 248 KEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 122222344455677899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=305.36 Aligned_cols=251 Identities=20% Similarity=0.244 Sum_probs=201.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
++...++.||.|+.|+|++++.+. +++..|||.+...... ..+++...++++..- ++|+||+.+|+|..+...++
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs---~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I 168 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRS---TGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI 168 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcc---cceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence 344578899999999999999998 8999999999876533 245677788877666 59999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
.||.|. ..+..+++. -.+++++..+-++...+..||.||.++..|||||+||+|||+|+.|.+||||||++.+..+.
T Consensus 169 cMelMs-~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 169 CMELMS-TCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred HHHHHH-HHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc
Confidence 999984 356666653 56789999999999999999999998766999999999999999999999999999776543
Q ss_pred --CccccCcccCCcccccC---CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
+...|-+.|||||.+.- ..|+-++||||||++|+||.||+.|+.....+...-..+..-..+.+.. ....++.
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~--~~gFSp~ 324 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPG--HMGFSPD 324 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCc--ccCcCHH
Confidence 35567899999999843 3589999999999999999999998775433322222222211111111 1226778
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+++|+..||.+|+.+||...++++|-
T Consensus 325 F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 325 FQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred HHHHHHHHhhcCcccCcchHHHhcCc
Confidence 99999999999999999999999874
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=333.53 Aligned_cols=234 Identities=19% Similarity=0.226 Sum_probs=189.9
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHH-HHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||++.... +++.||||++...... ....+..|.. +++.++||||+++++++...+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~ 78 (325)
T cd05604 2 VIGKGSFGKVLLAKRKL---DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV 78 (325)
T ss_pred ceeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCC
Confidence 57999999999999887 7889999999754321 2234556655 467789999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|..++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (325)
T cd05604 79 NGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT 155 (325)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc
Confidence 9999998886 4567999999999999999999999999 99999999999999999999999999875322 234
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..||+.|+|||++.+..++.++|||||||++|||++|..||......... ..+.... ...++..+..+.+++.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~ll~~ 229 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMY----DNILHKP--LVLRPGASLTAWSILEE 229 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHH----HHHHcCC--ccCCCCCCHHHHHHHHH
Confidence 56899999999999989999999999999999999999887543211111 1111111 11223345668899999
Q ss_pred hhccCCCCCCChHH
Q 010340 309 CLQYEPRERPNTKD 322 (512)
Q Consensus 309 cl~~~p~~Rps~~~ 322 (512)
||+.+|.+||++.+
T Consensus 230 ll~~~p~~R~~~~~ 243 (325)
T cd05604 230 LLEKDRQRRLGAKE 243 (325)
T ss_pred HhccCHHhcCCCCC
Confidence 99999999998863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=344.65 Aligned_cols=248 Identities=23% Similarity=0.271 Sum_probs=192.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeC--------
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG-------- 142 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 142 (512)
.|.+++.||+|+||.||+|.... +++.||||++.... ....+|+.+|+.++|||||++++++...
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~---~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICID---TSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECC---CCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 46678889999999999999987 78889999986432 3456799999999999999999987432
Q ss_pred CeeEEEEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeeecccC
Q 010340 143 DERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGL 219 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~ 219 (512)
..+++||||+++ +|.+++.. .....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeecccc
Confidence 246799999975 78777753 24567999999999999999999999999 99999999999998654 799999999
Q ss_pred ccccCCC---CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh----------
Q 010340 220 MKNSRDG---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL---------- 285 (512)
Q Consensus 220 a~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~---------- 285 (512)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||+||.+||.......... .+...
T Consensus 218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~-~i~~~~~~p~~~~~~ 296 (440)
T PTZ00036 218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV-RIIQVLGTPTEDQLK 296 (440)
T ss_pred chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCCHHHHH
Confidence 9865432 245679999999998764 58999999999999999999998775431110000 00000
Q ss_pred -c-------------ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 286 -M-------------DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 286 -~-------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
. ...+...++...+.++.+||.+||..||.+|||+.++++|-.
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 0 000011122234567899999999999999999999998843
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=350.75 Aligned_cols=248 Identities=17% Similarity=0.210 Sum_probs=202.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCC----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 143 (512)
..|.+.+.||+|+||.||++.+.. +++.||||++....... ...+.+|+.++..++|+||+++++.+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVS---DGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcC---CCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 366788889999999999999887 78899999997654322 346889999999999999999988775432
Q ss_pred ----eeEEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 144 ----ERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 144 ----~~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
.+++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEec
Confidence 368999999999999998642 3457899999999999999999999999 999999999999999999999999
Q ss_pred cCccccCC------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC
Q 010340 218 GLMKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE 291 (512)
Q Consensus 218 g~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (512)
|+++.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ... ....
T Consensus 188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~----~~~-~~~~ 262 (496)
T PTZ00283 188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMH----KTL-AGRY 262 (496)
T ss_pred ccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH----HHh-cCCC
Confidence 99876432 234578999999999998899999999999999999999998875432211111 111 1111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...+...++.+.+++.+||+.||.+||++.+++++
T Consensus 263 ~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 263 DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 23445566779999999999999999999999886
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=327.96 Aligned_cols=258 Identities=23% Similarity=0.292 Sum_probs=201.6
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
|+++.+.+.||+|+||.||+|.+.... ....+|+|.+...... ....+.+|++++.++ +||||+++++++...+..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCC-ceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 445667788999999999999987621 2235688877643222 235688999999999 8999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 212 (512)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcE
Confidence 9999999999999996421 235789999999999999999999999 9999999999999999999
Q ss_pred eeecccCccccCC---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhccc
Q 010340 213 RLSCFGLMKNSRD---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 213 kl~Dfg~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
||+|||++..... .....++..|+|||++.+..++.++|||||||++|||+| |..|+........ ......
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----~~~~~~ 238 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-----YEKLPQ 238 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH-----HHHHhc
Confidence 9999999864321 111223567999999988889999999999999999998 8876543211111 111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
......+...+..+.+|+.+||+.+|++||++.++++.|..+...
T Consensus 239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 112222334556788999999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=334.06 Aligned_cols=243 Identities=19% Similarity=0.222 Sum_probs=195.3
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||+|+||.||+|.... +++.||||++....... .+.+.+|+.++.++ +||||+.+++++...+.+++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (327)
T cd05617 2 VIGRGSYAKVLLVRLKK---NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV 78 (327)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 47999999999999987 78889999998653322 34588999999888 6999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCc
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~ 228 (512)
++|+|..++. ..+.+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (327)
T cd05617 79 NGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST 155 (327)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence 9999999886 4457999999999999999999999999 99999999999999999999999999875321 224
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH-hc-cchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI-RG-KNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. ......+.. ....++...+..+.+++
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~li 234 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE-KPIRIPRFLSVKASHVL 234 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh-CCCCCCCCCCHHHHHHH
Confidence 5689999999999998999999999999999999999988742110000 00 000111100 11223445566788999
Q ss_pred HHhhccCCCCCCCh------HHHHHH
Q 010340 307 SRCLQYEPRERPNT------KDLVST 326 (512)
Q Consensus 307 ~~cl~~~p~~Rps~------~~vl~~ 326 (512)
.+||+.||.+|+++ .++++|
T Consensus 235 ~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 235 KGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 99999999999985 456554
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=318.79 Aligned_cols=246 Identities=21% Similarity=0.259 Sum_probs=204.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+.+.||+|+||.||++.... +++.|++|.+...... ....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKA---DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcC---CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence 3456778999999999999987 7888999998754332 2457899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 9999999999997654567999999999999999999999998 9999999999999999999999999987654322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
...+++.|+|||++.+..++.++|||||||++|+|++|+.|+........ ...+.. ......+...+..+.++
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~ 232 (256)
T cd08529 158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL----ILKIIR-GVFPPVSQMYSQQLAQL 232 (256)
T ss_pred hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHc-CCCCCCccccCHHHHHH
Confidence 34578899999999988899999999999999999999988654321111 111111 11222333556778999
Q ss_pred HHHhhccCCCCCCChHHHHHH
Q 010340 306 ASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.+||+.+|++||++.+++++
T Consensus 233 i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 233 IDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHccCCcccCcCHHHHhhC
Confidence 999999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=327.28 Aligned_cols=256 Identities=22% Similarity=0.263 Sum_probs=202.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
+++.+.+.||.|+||.||+|....+. ....+++|.++.... ...+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDG-LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCC-CcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 45667888999999999999987632 223578888874321 2235789999999999 79999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCe
Q 010340 148 VAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 213 (512)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEE
Confidence 999999999999996421 135889999999999999999999998 99999999999999999999
Q ss_pred eecccCccccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccc
Q 010340 214 LSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSH 289 (512)
Q Consensus 214 l~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
|+|||++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||........ .......
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~-----~~~~~~~ 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL-----YEKLPQG 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHhcC
Confidence 9999998643221 11223457999999988889999999999999999998 8877643322111 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.....+..++..+.+|+.+||+.+|.+|||+.++++.|..+..
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2223344456778999999999999999999999999987764
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=319.57 Aligned_cols=248 Identities=24% Similarity=0.365 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEe-eCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC-DGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv 148 (512)
.++.+++.||+|+||.||++... +..||+|.+.... ..+.+.+|+.+++.++|+||+++++++. .++..++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-----CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 45667888999999999999764 5669999986543 3467999999999999999999999765 45678999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-C
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-K 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~ 227 (512)
|||+++++|.+++.......+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 157 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence 99999999999997645556899999999999999999999999 999999999999999999999999998764432 2
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
...++..|+|||++.+..++.++|||||||++|+|++ |+.|+........ ...+........+..+++.+.+++
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li 232 (256)
T cd05082 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKMDAPDGCPPVVYDVM 232 (256)
T ss_pred CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHhcCCCCCCCCCCCHHHHHHH
Confidence 3344668999999988889999999999999999998 8766543221111 111111122233445567789999
Q ss_pred HHhhccCCCCCCChHHHHHHhccc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+||+.+|++|||+.++++.|+.+
T Consensus 233 ~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 233 KQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHhcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=319.98 Aligned_cols=246 Identities=25% Similarity=0.364 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+.+.||+|+||.||++.+. ++..+|+|.+..... ....+.+|+++++.++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR----GKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HcchhhhhccCCCceEEEeEec----CCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 3457788999999999999876 345699999875432 34578899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc--
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS-- 228 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 228 (512)
|+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...+...
T Consensus 80 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 80 YMANGCLLNYLRE-RKGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred cCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 9999999999964 2347899999999999999999999999 99999999999999999999999999876543221
Q ss_pred ---cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 229 ---YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 229 ---~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
..++..|+|||.+.+..++.++|||||||++|+|++ |..|+....... ....+........+...+..+.+
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-----VVESVSAGYRLYRPKLAPTEVYT 232 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-----HHHHHHcCCcCCCCCCCCHHHHH
Confidence 122357999999998889999999999999999999 665543221111 11111111222333446677999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
++.+||..+|++|||+.++++.|.
T Consensus 233 li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 233 IMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHHhC
Confidence 999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=320.83 Aligned_cols=252 Identities=20% Similarity=0.307 Sum_probs=201.0
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCe------
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDE------ 144 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 144 (512)
.+.+.||+|+||.||+|........+..||||++....... ...+.+|+++++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 35677899999999999987644355789999987643322 3578999999999999999999999876554
Q ss_pred eEEEEEccCCCCHHhhhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCc
Q 010340 145 RLLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a 220 (512)
.++||||+++|+|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccce
Confidence 79999999999999988542 2346899999999999999999999998 999999999999999999999999998
Q ss_pred cccCCCCc------cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 221 KNSRDGKS------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 221 ~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
+....... ...+..|+|||.+.+..++.++|||||||++|||++ |..|+...... .....+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 235 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EIYDYLRHGNRLK 235 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 76543221 223568999999988889999999999999999999 66554332111 1111111112223
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+...+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3455667899999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=318.61 Aligned_cols=245 Identities=19% Similarity=0.269 Sum_probs=197.3
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||+|+||.||+|.+.... .+..||+|++....... .+.+.+|+.++++++||||+++++++. ....++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~-~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRK-KQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCC-CceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 4799999999999876322 45679999987654322 356899999999999999999999885 45789999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc-------
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS------- 228 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------- 228 (512)
+|.+++.. ....+++..++.++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++........
T Consensus 80 ~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 80 PLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99999864 3457899999999999999999999998 99999999999999999999999999875433211
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
..++..|+|||++.+..++.++|||||||++|||++ |..|+..... ......+........+..+++.+.+++.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG-----PEVMSFIEQGKRLDCPAECPPEMYALMK 232 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 122467999999988889999999999999999996 8876543211 1112222222233445566778999999
Q ss_pred HhhccCCCCCCChHHHHHHhccc
Q 010340 308 RCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+||..+|++||++.+|.+.|+.+
T Consensus 233 ~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 233 DCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHcCCChhhCcCHHHHHHHHhhh
Confidence 99999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=318.73 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=201.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+++++.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++++++|+||+++++++. .+..++|||
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~----~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYN----GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred HceeeeeeccCccceEEeeecC----CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 4567889999999999999876 55679999987554 34568999999999999999999999874 456899999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence 999999999997655667899999999999999999999999 9999999999999999999999999987654221
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...++..|+|||++.+..++.++||||||+++|||++ |+.|+....... ....+........+...+..+.+
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-----VIQNLERGYRMPRPDNCPEELYE 234 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-----HHHHHHcCCCCCCCCCCCHHHHH
Confidence 2234578999999988889999999999999999999 887654322111 11111111222333445567999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhcc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++.+||..+|++||++++++..|+.
T Consensus 235 li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 235 LMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHccCChhhCCCHHHHHHHhhc
Confidence 9999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=325.27 Aligned_cols=249 Identities=19% Similarity=0.258 Sum_probs=202.1
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+.||+|+||.||++.+.. +++.||||.+....... ...+.+|+.+++.++|+||+.+++.+.+.+..++|||
T Consensus 4 ~~~~ig~G~~g~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 4 QYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred eeEEeecCCCeEEEEEEEcC---CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 45667999999999999987 78899999987654322 2457789999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 159 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCcccc
Confidence 999999999986545557999999999999999999999998 9999999999999999999999999987644322
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
...|+..|+|||++.+..++.++|||||||++|+|++|+.||....... ........... .....+...+..+.+|+.
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 237 (285)
T cd05630 160 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVKE-VQEEYSEKFSPDARSLCK 237 (285)
T ss_pred CCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHHHhhhhh-hhhhcCccCCHHHHHHHH
Confidence 3468899999999998899999999999999999999998875421100 00011111111 111233445567889999
Q ss_pred HhhccCCCCCCC-----hHHHHHHhc
Q 010340 308 RCLQYEPRERPN-----TKDLVSTLA 328 (512)
Q Consensus 308 ~cl~~~p~~Rps-----~~~vl~~L~ 328 (512)
+||+.||++||| +.+++++-.
T Consensus 238 ~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 238 MLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred HHhhcCHHHccCCCCCchHHHHcChh
Confidence 999999999999 788888643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=320.28 Aligned_cols=255 Identities=16% Similarity=0.174 Sum_probs=206.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
.++.+.+.||.|+||.||++.... +++.+|||.+......+ ...+.+|+.+++.++||||+++++++..++..+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 78 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLL---DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 78 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecC---CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEE
Confidence 345677889999999999999876 77889999887543222 347889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 147 LVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
+||||+++++|.+++... ....+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++....
T Consensus 79 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 79 IVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 999999999999988632 3456899999999999999999999999 9999999999999999999999999987654
Q ss_pred CCC----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 225 DGK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 225 ~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
... ...++..|+|||++.+..++.++||||||+++|+|++|..|+.....+..... ..+.........+...+.
T Consensus 158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08229 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSE 235 (267)
T ss_pred cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh--hhhhcCCCCCCCcccccH
Confidence 322 34678899999999888899999999999999999999988654322111100 011111111112234667
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+.+++.+||..||.+|||+.+|++.+..+
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 799999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-41 Score=319.24 Aligned_cols=246 Identities=19% Similarity=0.227 Sum_probs=201.7
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-----ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+.+.+.||.|++|.||++.... +++.||+|.+...... ....+.+|++++++++||||+++++++......+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~---~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVD---TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLS 80 (263)
T ss_pred ccccceecCCCceEEEEEEEcC---CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEE
Confidence 3356678999999999999876 7888999998754321 1246889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 81 ~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 81 IFMEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEEECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 9999999999999986 3456899999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 227 -------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 227 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
....++..|+|||++.+..++.++||||||+++|||++|+.|+...... ...............+...+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 233 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPTNPQLPSHVS 233 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHHhccCCCCCCCccCC
Confidence 2345678899999999888999999999999999999999876432111 00111111122233455566
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..+.+++.+||..+|.+|||+.+++++.
T Consensus 234 ~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 234 PDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 7789999999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=319.24 Aligned_cols=249 Identities=21% Similarity=0.318 Sum_probs=195.3
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEe-eCCeeEEEEEccCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCC-DGDERLLVAEYMPN 154 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~~~~ 154 (512)
.||+|+||.||+|.+.........||+|.+..... ...+.+.+|+.+++.++||||+++++++. .++..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 46999999999999865444567899999864322 22457889999999999999999999876 45568999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--------
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------- 226 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-------- 226 (512)
|+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 999999964 2345678888999999999999999998 999999999999999999999999998754321
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
....++..|+|||.+.+..++.++|||||||++|||++|+.|++...... .....+........+...+..+.+++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li 235 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF----DITVYLLQGRRLLQPEYCPDPLYEVM 235 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHhcCCCCCCCCcCCHHHHHHH
Confidence 12234668999999988889999999999999999999765544321110 11111111111122333456788999
Q ss_pred HHhhccCCCCCCChHHHHHHhcccc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+||..+|++||++.++++.|+.+.
T Consensus 236 ~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 236 LSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHcCCChhhCCCHHHHHHHHHHHh
Confidence 9999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=337.84 Aligned_cols=255 Identities=19% Similarity=0.284 Sum_probs=202.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 146 (512)
++.+.+.||+|+||.||+|++... ...++.||||+++...... .+.+.+|+++|.++. ||||++++++|...+..+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~ 117 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY 117 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence 344677899999999999997531 1245789999998654332 346889999999997 999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC-------------------------------------------------------------
Q 010340 147 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 165 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~------------------------------------------------------------- 165 (512)
+||||+++|+|.++++...
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 9999999999999996421
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC
Q 010340 166 -----------------------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (512)
Q Consensus 166 -----------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 210 (512)
...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~ 276 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGK 276 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCC
Confidence 123677888999999999999999998 99999999999999999
Q ss_pred CCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchh
Q 010340 211 DPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~ 283 (512)
.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++ |+.|+........ ..
T Consensus 277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~----~~ 352 (401)
T cd05107 277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ----FY 352 (401)
T ss_pred EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH----HH
Confidence 9999999998754321 12345778999999988889999999999999999998 7766543211110 11
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
..+........+...+..+.+|+.+||..+|.+||++.+|++.|+.+
T Consensus 353 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 353 NAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11111122233444567799999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=318.10 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=200.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+++.||+|+||.||+|... .+..||+|.+..... ..+.+.+|+.++++++|+||+++++++. ....++|||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~----~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWN----GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HhhhhheeccccCceEEEEEec----CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 4567889999999999999876 345599999886543 4567999999999999999999999885 456899999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 999999999997544566899999999999999999999999 9999999999999999999999999987654321
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...++..|+|||++.+..++.++||||||+++|+|++ |..|+...... .....+........+...+..+.+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-----EVLEQVERGYRMPCPQDCPISLHE 234 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcCCHHHHH
Confidence 1234567999999988889999999999999999999 66665432111 111111111222334455677999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhcc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
|+.+||..+|++|||+.++++.|+.
T Consensus 235 li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 235 LMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-41 Score=322.57 Aligned_cols=256 Identities=20% Similarity=0.281 Sum_probs=201.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+++.||.|+||+||+|.+..... ....||+|++....... .+.+.+|+.++..++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~ 86 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV 86 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence 34567888999999999999765211 12358999987543322 4568899999999999999999999975 457899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 228 (512)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 87 TQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164 (279)
T ss_pred EEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence 999999999999964 3456899999999999999999999999 99999999999999999999999999876543221
Q ss_pred ------cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 229 ------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 229 ------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
..+++.|+|||.+.+..++.++|||||||++|||++ |..|+...... .....+........+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR-----EIPDLLEKGERLPQPPICTID 239 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCcCCCCccCCHH
Confidence 223567999999988889999999999999999998 76654322111 111122222222333455677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
+.+++.+||..||++||++.+++..|..+...+
T Consensus 240 ~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 240 VYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 889999999999999999999999998876544
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-41 Score=330.83 Aligned_cols=236 Identities=17% Similarity=0.215 Sum_probs=193.5
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 148 (512)
.+++.||+|+||.||+|.... +++.||||++..... ...+.+..|+.++..+. |++|+++++++.+.+.+++|
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred eEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 356778999999999999887 788999999986432 22356788999998885 67888999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--- 225 (512)
|||+++|+|.+++. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++....
T Consensus 80 ~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 80 MEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred EcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCc
Confidence 99999999999986 4467999999999999999999999999 99999999999999999999999999875322
Q ss_pred -CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
.....||+.|+|||++.+..++.++|||||||++|||++|+.|+........ ...+... ...++...+..+.+
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~ 230 (323)
T cd05615 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL----FQSIMEH--NVSYPKSLSKEAVS 230 (323)
T ss_pred cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCccCCHHHHH
Confidence 2245689999999999988899999999999999999999988654321111 1111111 11234455667889
Q ss_pred HHHHhhccCCCCCCCh
Q 010340 305 LASRCLQYEPRERPNT 320 (512)
Q Consensus 305 li~~cl~~~p~~Rps~ 320 (512)
++.+||+.+|.+|++.
T Consensus 231 li~~~l~~~p~~R~~~ 246 (323)
T cd05615 231 ICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHcccCHhhCCCC
Confidence 9999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=322.62 Aligned_cols=243 Identities=22% Similarity=0.345 Sum_probs=190.4
Q ss_pred cCCCCCCCeEEEEEEcCC---------------------CCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccce
Q 010340 77 ESGEKAPNVVYKGRLQDG---------------------NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANL 135 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~---------------------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 135 (512)
.||+|+||.||+|..... ......|++|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 579999999999986321 11234689999876543334578899999999999999999
Q ss_pred EEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-----
Q 010340 136 IGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----- 210 (512)
Q Consensus 136 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----- 210 (512)
+++|......++||||+++|+|..++.. ..+.+++..+..++.||+.||.|||+.+ ++||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999998864 3457899999999999999999999998 99999999999997644
Q ss_pred --CCeeecccCccccCCCCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHH-hCCCCCChhhHHHHhccchhhhc
Q 010340 211 --DPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLL-SGKHIPPSHALDMIRGKNILHLM 286 (512)
Q Consensus 211 --~~kl~Dfg~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~ell-tg~~~~~~~~~~~~~~~~~~~~~ 286 (512)
.+|++|||++..........++..|+|||.+.+ ..++.++|||||||++|||+ +|+.|+........ ....
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-----ERFY 234 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-----HHHH
Confidence 379999999866544445567888999999865 45899999999999999995 67766543211110 1111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.. ....+......+.+++.+||+.+|++|||+.++++.|.
T Consensus 235 ~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 235 EK--KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred Hh--ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11 11122223356889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=322.84 Aligned_cols=251 Identities=20% Similarity=0.323 Sum_probs=198.0
Q ss_pred ccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.+.+.||+|+||.||+|.+... ...+..||||++..... .....+.+|+.+++.++||||+++++++..+...++|
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 87 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 87 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEE
Confidence 44677889999999999987531 12457799999865332 1234688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCc
Q 010340 149 AEYMPNDTLAKHLFHWE--------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a 220 (512)
|||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999999986422 134678899999999999999999998 999999999999999999999999998
Q ss_pred cccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 221 KNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 221 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
+...... ...+++.|+|||++.++.++.++|||||||++|||++ |..|+...... .....+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~~~~~~ 241 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----QVLRFVMEGGLLD 241 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCcCC
Confidence 7543221 2234678999999988889999999999999999999 56554432111 1111111111112
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 242 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 33445667899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=329.91 Aligned_cols=252 Identities=20% Similarity=0.176 Sum_probs=197.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+|.+++.||+|+||.||++.... +++.||||++.+... ...+.+.+|+.++..++|+||+++++++.+++.+++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l 78 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKN---TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYL 78 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEE
Confidence 45678899999999999999987 788899999975321 223568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++|+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 79 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 79 VMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EEecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 9999999999999964 3456899999999999999999999999 9999999999999999999999999987544322
Q ss_pred -----ccccCcccCCcccccC-----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 228 -----SYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 228 -----~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
...||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... .+...............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~ 235 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHKEHFQFPPDVTD 235 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH-HHHcCCCcccCCCccCC
Confidence 2458999999999863 457889999999999999999998875432111100 01000000000111123
Q ss_pred HHHHHHHHHHHhhccCC--CCCCChHHHHHHhc
Q 010340 298 EATVVFDLASRCLQYEP--RERPNTKDLVSTLA 328 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p--~~Rps~~~vl~~L~ 328 (512)
.+..+.+++.+||..++ ..|+++.+++++-.
T Consensus 236 ~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 236 VSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred CCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 56678899999876533 33789999999843
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=320.71 Aligned_cols=253 Identities=22% Similarity=0.298 Sum_probs=202.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+.+.+.||+|+||.||+|.+......+..||||++...... ....|..|+.+++.++||||+++++++.++...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 455778899999999999998764334457999998754321 2457999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc-
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS- 228 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~- 228 (512)
||+++++|.+++.. ..+.+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 85 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 162 (269)
T cd05065 85 EFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 162 (269)
T ss_pred ecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence 99999999999964 3456899999999999999999999999 99999999999999999999999999875432211
Q ss_pred ------ccc--CcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 229 ------YST--NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 229 ------~~~--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
..+ +..|+|||.+.+..++.++|||||||++|||++ |..|+....... ....+........+..++
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~ 237 (269)
T cd05065 163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-----VINAIEQDYRLPPPMDCP 237 (269)
T ss_pred cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-----HHHHHHcCCcCCCcccCC
Confidence 111 346999999998899999999999999999886 887764322111 111111112222334556
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
..+.+++.+||..+|.+||++.+++..|+.+
T Consensus 238 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 238 TALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 7788999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=317.62 Aligned_cols=248 Identities=25% Similarity=0.342 Sum_probs=199.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+.++++||+|+||.||+|.+.. + ..||+|++..... ..+.+.+|+.+++.++||||+++++++.. ...++|||
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~---~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e 80 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNG---T-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 80 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecC---C-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEE
Confidence 46688899999999999998864 3 4599999986442 45679999999999999999999998754 56899999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 999999999997544556899999999999999999999999 9999999999999999999999999987554322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...++..|+|||+..+..++.++|||||||++|+|+| |..|+........ ............+...+..+.+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ 234 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRMPCPPECPESLHD 234 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-----HHHHhcCCCCCCccccCHHHHH
Confidence 2234567999999988889999999999999999999 6655433211111 1111111112234456677899
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
++.+||+.+|++||++.++++.|+..
T Consensus 235 li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 235 LMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHccCCcccCCCHHHHHHHHHHh
Confidence 99999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=317.18 Aligned_cols=243 Identities=18% Similarity=0.310 Sum_probs=192.3
Q ss_pred cCCCCCCCeEEEEEEcCCC---------CCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 77 ESGEKAPNVVYKGRLQDGN---------DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.||+|+||.||+|...... .....|++|.+..........+..|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 5799999999999864321 1234689999876554445578899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC-------CeeecccCc
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-------PRLSCFGLM 220 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-------~kl~Dfg~a 220 (512)
||||+++|+|..++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999988853 3456899999999999999999999999 999999999999987664 899999998
Q ss_pred cccCCCCccccCcccCCccccc-CCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 221 KNSRDGKSYSTNLAYTPPEYLR-NGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 221 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
..........++..|+|||++. +..++.++|||||||++|||++ |..|+........ ........ ......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-----~~~~~~~~--~~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-----ERFYEGQC--MLVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-----HHHHhcCc--cCCCCC
Confidence 7766555667889999999986 4568999999999999999985 6655432211100 01111111 111223
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+..+.+|+.+||+.||.+||++.+|++.|.
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 456889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=323.64 Aligned_cols=258 Identities=18% Similarity=0.215 Sum_probs=206.9
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEE
Q 010340 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYC 139 (512)
Q Consensus 60 ~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 139 (512)
+++++.....+.|.+++.||.|+||.||+|.+.. +++.|++|.+........+.+.+|+.+++.++||||+++++.+
T Consensus 2 ~~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 78 (292)
T cd06644 2 EHVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKE---TGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78 (292)
T ss_pred chhhcccCcchhhhhhheecCCCCeEEEEEEECC---CCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEE
Confidence 3445555555678899999999999999999987 7888999999765444456788999999999999999999999
Q ss_pred eeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 140 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
..++..++||||+++++|..++.. ....+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||+
T Consensus 79 ~~~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~ 156 (292)
T cd06644 79 YWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGV 156 (292)
T ss_pred EeCCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCcc
Confidence 999999999999999999888754 3456899999999999999999999998 99999999999999999999999998
Q ss_pred ccccCC----CCccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc-
Q 010340 220 MKNSRD----GKSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH- 289 (512)
Q Consensus 220 a~~~~~----~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~- 289 (512)
+..... .....+++.|+|||++. ...++.++|||||||++|||++|..|+....... ....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~ 232 (292)
T cd06644 157 SAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR----VLLKIAKSEP 232 (292)
T ss_pred ceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH----HHHHHhcCCC
Confidence 765332 22345788999999985 3447889999999999999999997764321110 011111100
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.....+...+..+.+++.+||..+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 233 PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0111233455678899999999999999999999886
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-41 Score=324.10 Aligned_cols=249 Identities=19% Similarity=0.217 Sum_probs=194.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcC---CCCCccceEEEEee-----
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKL---RHKRLANLIGYCCD----- 141 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 141 (512)
|.+++.||+|+||.||+|.+.. +++.||+|.+....... ...+.+|+.+++.+ +||||+++++++..
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPH---SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECC---CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 5577889999999999999987 78899999987643222 23566788877766 69999999999864
Q ss_pred CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
....++||||+++ +|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.
T Consensus 79 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 79 ETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred CceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccc
Confidence 3457999999975 8999887544556999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc--------c---
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM--------D--- 287 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~--------~--- 287 (512)
..... ....+|..|+|||++.+..++.++|||||||++|+|++|++||......... ..+.... .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL-GKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred cccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHH-HHHHHHhCCCChhhCcccc
Confidence 65432 2346788999999998888999999999999999999999766432111000 0000000 0
Q ss_pred ----cccC-------CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 288 ----SHLE-------GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 288 ----~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.... ....+..+..+.+++.+||+.||++|||+.+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 00112345668899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=317.35 Aligned_cols=246 Identities=17% Similarity=0.192 Sum_probs=203.9
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC-CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+++.||.|+||.||++.+.. +++.||+|.++... ....+.+.+|+.+++.++||||+++++.+.+.+.+++|||
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVN---SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcC---CCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4577889999999999999887 77889999986433 2234678899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
|+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 157 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA 157 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeeccccccc
Confidence 999999999987545567899999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
....+++.|+|||++.+..++.++|+||||+++|+|++|..||......... ..+ ........+...+..+.+|+
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~li 232 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI----LKV-CQGSYKPLPSHYSYELRSLI 232 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHH----HHH-hcCCCCCCCcccCHHHHHHH
Confidence 2356788999999998888999999999999999999999887543211110 111 11111223444566788999
Q ss_pred HHhhccCCCCCCChHHHHHH
Q 010340 307 SRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+||+.||++|||+.+++..
T Consensus 233 ~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 233 KQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHhCCcccCCCHHHHhhc
Confidence 99999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=317.91 Aligned_cols=249 Identities=20% Similarity=0.238 Sum_probs=190.9
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||+|+||.||+|....+. ++..+|+|.+...... ....+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGY-TPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 5799999999999876432 5677999998765432 2347889999999999999999999999988999999999999
Q ss_pred CHHhhhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC------
Q 010340 156 TLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG------ 226 (512)
Q Consensus 156 ~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~------ 226 (512)
+|.+++.... ....++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999996422 234677888899999999999999999 999999999999999999999999998654322
Q ss_pred CccccCcccCCcccccCC-------CCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 227 KSYSTNLAYTPPEYLRNG-------RVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
....++..|+|||++.+. .++.++|||||||++|||++ |+.|+............+.........+......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 123457789999998542 35789999999999999996 8877643221111111111110111111222234
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+..+.+++..|| .+|++|||+.+|+..|+
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 556788999999 68999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=322.92 Aligned_cols=247 Identities=19% Similarity=0.228 Sum_probs=200.2
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+.||.|+||.||++.+.. +++.||+|.+....... ...+.+|+++|+.++|+||+.+++.+..++..++|||
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRA---TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred EEEEEecCCCeEEEEEEECC---CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 45668999999999999987 78899999987543222 2457889999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---C
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---K 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~ 227 (512)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...... .
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIR 159 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCccc
Confidence 999999999886544557999999999999999999999999 999999999999999999999999998654332 2
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
...|+..|+|||++.+..++.++|+|||||++|+|++|..||........ ...+...+.. ....++...+..+.+|+.
T Consensus 160 ~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 237 (285)
T cd05632 160 GRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDRRVLE-TEEVYSAKFSEEAKSICK 237 (285)
T ss_pred CCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhhc-cccccCccCCHHHHHHHH
Confidence 34678999999999888899999999999999999999988654321111 1111111111 111233445567889999
Q ss_pred HhhccCCCCCCC-----hHHHHHH
Q 010340 308 RCLQYEPRERPN-----TKDLVST 326 (512)
Q Consensus 308 ~cl~~~p~~Rps-----~~~vl~~ 326 (512)
+||+.||++||+ +.+++.+
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 238 MLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HHccCCHhHcCCCcccChHHHHcC
Confidence 999999999999 6677765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=316.82 Aligned_cols=247 Identities=25% Similarity=0.350 Sum_probs=198.8
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
++||+|+||.||+|.+...+.++..||+|.+...... ..+.+.+|+.+++.++||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 3579999999999988764434578999999866543 3457899999999999999999999876 4568999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCcc-----
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY----- 229 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----- 229 (512)
|+|.+++.. ...+++..++.++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999973 347899999999999999999999999 999999999999999999999999998765332211
Q ss_pred --ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 230 --STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 230 --~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
.++..|+|||.+.+..++.++|||||||++|+|++ |..|+..... ......+........+...+..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----AEVIAMLESGERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 12457999999988889999999999999999998 7766533211 111111111112233445567788999
Q ss_pred HHhhccCCCCCCChHHHHHHhcccc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+||..+|++||++.++++.|+.+.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=316.19 Aligned_cols=246 Identities=21% Similarity=0.270 Sum_probs=199.3
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||+|++|.||+|.+.........||||.+..... ...+.+.+|+.++++++||||+++++++.. ...++||||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 47999999999999876433445799999987665 345679999999999999999999999988 8899999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-------Cc
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------KS 228 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-------~~ 228 (512)
+|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 9999997543357899999999999999999999999 999999999999999999999999998765432 12
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
..++..|+|||++.+..++.++|||||||++|||++ |..|+......... . .+.........+...+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL-K---KIDKEGERLERPEACPQDIYNVML 235 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH-H---HHHhcCCcCCCCccCCHHHHHHHH
Confidence 345678999999988889999999999999999999 88765322111100 0 000011111223345667889999
Q ss_pred HhhccCCCCCCChHHHHHHhc
Q 010340 308 RCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+||+.+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=321.24 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=202.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||+|...... ..+..||+|.+...... ....+.+|+.++..++||||+++++++......++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~ 86 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV 86 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEE
Confidence 4557888999999999999987522 24578999998754322 23468899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 148 VAEYMPNDTLAKHLFHWE--------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~ 165 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCccc
Confidence 999999999999996422 234788999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCC
Q 010340 220 MKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 220 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
++..... ....++..|+|||.+.+..++.++|||||||++|||+| |..|+....... ...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~ 240 (277)
T cd05032 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-----VLKFVIDGGHL 240 (277)
T ss_pred chhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-----HHHHHhcCCCC
Confidence 8754322 22345778999999988889999999999999999998 776654321111 11111111122
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 334445678899999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=316.88 Aligned_cols=247 Identities=26% Similarity=0.376 Sum_probs=203.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+.+.||.|+||.||+|.. .++.||||.+..... ..+++.+|+.+++.++|+||+++++++.+....++|||
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~-----~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDY-----RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hccceeeeecCCCceEEEEEe-----cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 445677889999999999987 456799999986543 45689999999999999999999999998899999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-cc
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-SY 229 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~~ 229 (512)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~ 159 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSG 159 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccC
Confidence 999999999997544457999999999999999999999999 9999999999999999999999999988664322 22
Q ss_pred ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..+..|+|||++.++.++.++||||||+++|+|++ |..|+........ ...+........+...++.+.+++.+
T Consensus 160 ~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~ 234 (256)
T cd05039 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPHVEKGYRMEAPEGCPPEVYKVMKD 234 (256)
T ss_pred CCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHhcCCCCCCccCCCHHHHHHHHH
Confidence 33567999999988889999999999999999997 8766543322111 11111111223344456778999999
Q ss_pred hhccCCCCCCChHHHHHHhcc
Q 010340 309 CLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 309 cl~~~p~~Rps~~~vl~~L~~ 329 (512)
||..+|++|||+.++++.|+.
T Consensus 235 ~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 235 CWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HhccChhhCcCHHHHHHHHhc
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=319.42 Aligned_cols=248 Identities=16% Similarity=0.184 Sum_probs=199.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+.+++.||+|+||.||+|.+.. +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVN---TGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcC---CCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 45577888999999999999887 788899999876654445678899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----C
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----G 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~ 226 (512)
|+++++|.+++. ..+.+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++..... .
T Consensus 87 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd06645 87 FCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKR 163 (267)
T ss_pred ccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCccccc
Confidence 999999999986 4567999999999999999999999999 99999999999999999999999999865432 2
Q ss_pred CccccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-HhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-IRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
....|+..|+|||++. ...++.++|||||||++|+|++|+.|+....... ............... .....+..+
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 241 (267)
T cd06645 164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSF 241 (267)
T ss_pred ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHH
Confidence 3456889999999974 4568899999999999999999998764321110 000000000000000 011234568
Q ss_pred HHHHHHhhccCCCCCCChHHHHHH
Q 010340 303 FDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+++.+||..+|++|||+.+++++
T Consensus 242 ~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 242 HHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHHHHccCCchhCcCHHHHhcC
Confidence 899999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=323.20 Aligned_cols=258 Identities=20% Similarity=0.324 Sum_probs=200.6
Q ss_pred cccccccCCCCCCCeEEEEEEcC-CCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee--CCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 147 (512)
.+.+++.||+|+||.||++.... ...+++.||||.+........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 45578889999999999998542 122678899999876544445678999999999999999999998754 346899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++.......
T Consensus 85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999999999964 3456899999999999999999999999 9999999999999999999999999988654322
Q ss_pred c-------cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh---cc--------chhhhcccc
Q 010340 228 S-------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR---GK--------NILHLMDSH 289 (512)
Q Consensus 228 ~-------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~~--------~~~~~~~~~ 289 (512)
. ..++..|+|||++.+..++.++|||||||++|||++|..++......... .. .+...+...
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 1 11234599999998888999999999999999999987653322111000 00 001111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.....+...+..+.+|+.+||..+|++|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11122334556789999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=333.57 Aligned_cols=248 Identities=22% Similarity=0.306 Sum_probs=212.1
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
+.++||+|.||+|++|.|...+.+...||||+++.+... ....|.+|+.+|.+|+|+|+++|||+..+ ....||||++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 456789999999999999987666678999999977655 45789999999999999999999999987 6688999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCcc-c-
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY-S- 230 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~- 230 (512)
+.|+|.+.|++.....|-......++.||+.||.||.+++ +|||||-..|||+-....+||+|||+.+........ .
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998756677888999999999999999999998 999999999999999999999999999876554322 1
Q ss_pred -----cCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 231 -----TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 231 -----~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....|+|||.+....|+.++|||+|||+||||+|+..-+|.. ..+..+.+.++..-+-.-+..|++++.++
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G----~~g~qIL~~iD~~erLpRPk~csedIY~i 347 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVG----CRGIQILKNIDAGERLPRPKYCSEDIYQI 347 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCC----CCHHHHHHhccccccCCCCCCChHHHHHH
Confidence 235799999999999999999999999999999976544332 23444556666555555678899999999
Q ss_pred HHHhhccCCCCCCChHHHHHHh
Q 010340 306 ASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L 327 (512)
+..||..+|++||||..|.+.+
T Consensus 348 mk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 348 MKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHhccCCccccccHHHHHHhH
Confidence 9999999999999999997543
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=324.53 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=202.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
+.+.+.||+|+||.||++..... ...+..||||+++...... .+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 116 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILV 116 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEE
Confidence 44677889999999999986321 1256689999987653322 35689999999999 89999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++|+|.+++.......+++.++..++.|++.||.|||+++ ++|+||||+|||++.++.++|+|||+++......
T Consensus 117 v~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 195 (302)
T cd05055 117 ITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS 195 (302)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCC
Confidence 999999999999997544445899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
...++..|+|||.+.+..++.++|||||||++|||++ |..|+....... ..............+...+.
T Consensus 196 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 271 (302)
T cd05055 196 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS----KFYKLIKEGYRMAQPEHAPA 271 (302)
T ss_pred ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH----HHHHHHHcCCcCCCCCCCCH
Confidence 2234678999999988889999999999999999998 877654321111 11111111112222333456
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+.+++.+||..+|++|||+.++++.|..+
T Consensus 272 ~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 272 EIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=321.72 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=200.0
Q ss_pred cccccCCCCCCCeEEEEEEcCC-CCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeC--CeeEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDG-NDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 148 (512)
.+++.||+|+||+||++..... ..+++.||+|.+..... .....+.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 4678899999999988764321 12677899999876532 1245788999999999999999999998753 458899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++++|.+++.. ..+++..++.++.|++.||.|||+++ ++|+||||+|||++.++.+||+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 999999999999953 46999999999999999999999999 9999999999999999999999999987654321
Q ss_pred ------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH---HHHhc-------cchhhhcccccC
Q 010340 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL---DMIRG-------KNILHLMDSHLE 291 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~---~~~~~-------~~~~~~~~~~~~ 291 (512)
...++..|+|||++.+..++.++|||||||++|||+||..|+..... +.... ............
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 12345679999999888899999999999999999999877532111 00000 011111111122
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
...+...+..+.+++.+||+.+|++|||++++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2234445678999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=324.84 Aligned_cols=249 Identities=17% Similarity=0.259 Sum_probs=206.3
Q ss_pred cCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 67 ~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+....|.+++.||.|+||.||++.... +++.||+|.+........+.+.+|+.+++.++||||+++++++..+...+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIA---TGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECC---CCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEE
Confidence 334567788899999999999999876 78889999998766555677899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 93 VVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred EeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 9999999999999985 356899999999999999999999999 999999999999999999999999998754332
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc-ccccCCCCCHHHHHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM-DSHLEGNFSSEEATV 301 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 301 (512)
....+++.|+|||.+.+..++.++|||||||++|+|++|..||...... ....... ........+...+..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 244 (297)
T cd06656 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIATNGTPELQNPERLSAV 244 (297)
T ss_pred ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc----hheeeeccCCCCCCCCccccCHH
Confidence 2346788999999999888999999999999999999999876432110 0000111 011111223445667
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHH
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.+++.+||..+|++||++.+++++
T Consensus 245 ~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 245 FRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 8899999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=316.25 Aligned_cols=254 Identities=18% Similarity=0.231 Sum_probs=207.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+.+.||.|+||.||+|.... +++.||+|.++.....+ .+.+.+|++++++++|+||+++++++...+..++
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~l 79 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLL---DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNI 79 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcC---CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 35567788999999999999986 78889999987433222 4578999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 148 VAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
||||+++++|.+++... ....+++..++.++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999998642 3456899999999999999999999999 99999999999999999999999999875433
Q ss_pred C----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH-HHHH
Q 010340 226 G----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS-EEAT 300 (512)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 300 (512)
. ....+++.|+|||.+.+..++.++|||||||++|+|++|+.|+.....+... .............+. ..+.
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS---LCKKIEKCDYPPLPADHYSE 235 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH---HHhhhhcCCCCCCChhhcCH
Confidence 2 2346788999999998888999999999999999999999886433211110 111111111122222 5566
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+.+++.+||..+|++|||+.+|++.|+.+.
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 7899999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=317.72 Aligned_cols=250 Identities=19% Similarity=0.252 Sum_probs=188.8
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
++||+|+||.||+|....+. ....+|+|.+....... ...+.+|+.+++.++||||+++++.+.+....++||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGM-SKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCC-CCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 35799999999999765432 45678999876543222 34688999999999999999999999999999999999999
Q ss_pred CCHHhhhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-----
Q 010340 155 DTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (512)
Q Consensus 155 g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----- 226 (512)
|+|.+++.... ....++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999996532 233567888999999999999999999 999999999999999999999999998653221
Q ss_pred -CccccCcccCCcccccC-------CCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 227 -KSYSTNLAYTPPEYLRN-------GRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
....+++.|+|||++.. ..++.++|||||||++|||++ |..|+......................+..+..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLK 238 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCccccc
Confidence 22344677999999742 346889999999999999999 554443321111101111111111112223344
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+..+.+++..|| .||++|||+++|++.|.
T Consensus 239 ~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 239 YSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 5666778999999 59999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=320.46 Aligned_cols=257 Identities=21% Similarity=0.341 Sum_probs=200.7
Q ss_pred ccccccCCCCCCCeEEEEEEcC-CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeC--CeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 147 (512)
+.+++.||+|+||.||++.... +..+++.||+|.++..... ....+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 3478889999999999998642 2226788999998754322 235799999999999999999999999875 56899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||++|++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++.......
T Consensus 86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999864 3346899999999999999999999999 9999999999999999999999999987653321
Q ss_pred -------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh------c----cchhhhccccc
Q 010340 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR------G----KNILHLMDSHL 290 (512)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~------~----~~~~~~~~~~~ 290 (512)
...++..|+|||++.+..++.++|||||||++|||+|++.|.......... . ...........
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence 234566799999998888999999999999999999987553221100000 0 00001111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 291 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
....+...+..+.+|+.+||+.+|.+|||+.++++.|+.+
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1122334567799999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=326.95 Aligned_cols=248 Identities=19% Similarity=0.177 Sum_probs=197.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||+++... +++.||+|++..... .....+.+|+.++..++|+||+++++++.+.+..++
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~l 78 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKH---TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYL 78 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 45678899999999999999887 788899999875321 123458889999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||++||+|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 79 v~Ey~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 79 VMDYYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EEeCCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999999964 2457899999999999999999999999 9999999999999999999999999987654322
Q ss_pred -----ccccCcccCCcccccC-----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC--
Q 010340 228 -----SYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295 (512)
Q Consensus 228 -----~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (512)
...||+.|+|||++.+ +.++.++|||||||++|||++|+.||........ ...+........++
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~ 232 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNHEERFQFPSH 232 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH----HHHHHcCCCcccCCCc
Confidence 2468999999999865 4688899999999999999999988754321111 11111111111111
Q ss_pred -HHHHHHHHHHHHHhhccCCCC--CCChHHHHHHh
Q 010340 296 -SEEATVVFDLASRCLQYEPRE--RPNTKDLVSTL 327 (512)
Q Consensus 296 -~~~~~~~~~li~~cl~~~p~~--Rps~~~vl~~L 327 (512)
...++.+.+++.+||..++.+ |+++.+++++-
T Consensus 233 ~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~ 267 (331)
T cd05624 233 ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA 267 (331)
T ss_pred cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence 234677889999999866544 46888888774
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=320.02 Aligned_cols=251 Identities=20% Similarity=0.309 Sum_probs=199.9
Q ss_pred ccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.+++.||+|+||.||+|.+... ...+..||+|.+....... ...|.+|+.+++.++|+||+++++++.+....++|
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 87 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL 87 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence 44678889999999999998641 1145679999887543222 34689999999999999999999999998899999
Q ss_pred EEccCCCCHHhhhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC---CCeeecccCc
Q 010340 149 AEYMPNDTLAKHLFHWEN-----QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLM 220 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg~a 220 (512)
|||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++ .+||+|||++
T Consensus 88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccc
Confidence 999999999999964321 25899999999999999999999999 99999999999998654 5899999998
Q ss_pred cccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 221 KNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 221 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
+...... ....+..|+|||++.+..++.++|||||||++|||++ |..||....... ....+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-----~~~~~~~~~~~~ 241 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-----VMEFVTGGGRLD 241 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHcCCcCC
Confidence 7653221 1223467999999988889999999999999999997 776654322111 112222222233
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+...+..+.+++.+||+.+|++|||+.+++++|.
T Consensus 242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 44556677899999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=318.53 Aligned_cols=245 Identities=17% Similarity=0.221 Sum_probs=196.8
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeC------Cee
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDG------DER 145 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~~~ 145 (512)
.+++.||.|+||.||+|.... +++.||+|++.... .....+.+|+.++.++ +|+||+++++++... ...
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~---~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 9 ELVELVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hHHHheeecCCeEEEEEEEcC---CCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 356678999999999999987 78899999987543 3346789999999999 799999999998753 468
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 163 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceeccc
Confidence 99999999999999997645567899999999999999999999998 99999999999999999999999999875432
Q ss_pred ----CCccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH
Q 010340 226 ----GKSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296 (512)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (512)
.....|+..|+|||++. +..++.++|||||||++|||++|+.|+....... ..............+.
T Consensus 164 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~ 239 (272)
T cd06637 164 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALFLIPRNPAPRLKSK 239 (272)
T ss_pred ccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHHHHhcCCCCCCCCC
Confidence 22456788999999986 3458889999999999999999998764321110 0011111111111223
Q ss_pred HHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 297 EEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 297 ~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..+..+.+|+.+||..+|.+|||+.+++++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 240 KWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 345678899999999999999999999876
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=320.16 Aligned_cols=249 Identities=17% Similarity=0.191 Sum_probs=201.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.+++.||.|+||.||+|.+.. ++..+++|.+........+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKE---TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECC---CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 3577889999999999999987 7788999998765433456788999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CC
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GK 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~ 227 (512)
+++++|..++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++..... ..
T Consensus 84 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (282)
T cd06643 84 CAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 161 (282)
T ss_pred cCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEccccccccccccccccc
Confidence 999999988754 3457999999999999999999999999 99999999999999999999999999865432 22
Q ss_pred ccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc-ccCCCCCHHHHHH
Q 010340 228 SYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS-HLEGNFSSEEATV 301 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 301 (512)
...+++.|+|||++. +..++.++|||||||++|+|++|+.|+....... ....+... ......+...+..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR----VLLKIAKSEPPTLAQPSRWSSE 237 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH----HHHHHhhcCCCCCCCccccCHH
Confidence 346789999999984 3457889999999999999999997754321110 01111100 0011123345567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+.+++.+||+.||.+||++.+++++-.-
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~il~~~~~ 265 (282)
T cd06643 238 FKDFLKKCLEKNVDARWTTTQLLQHPFV 265 (282)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCCCE
Confidence 8999999999999999999999987553
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=317.55 Aligned_cols=253 Identities=23% Similarity=0.287 Sum_probs=202.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+.+.+.||+|+||.||+|.+.........+|+|.++...... .+.+.+|+.++..++||||+++++++...+..++||
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVT 84 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 3456788899999999999986543345679999987543222 357899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc-
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS- 228 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~- 228 (512)
||+++++|.+++.. ....+++.+++.++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++........
T Consensus 85 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 85 EYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999999964 3456899999999999999999999999 99999999999999999999999999876543221
Q ss_pred ------cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 229 ------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 229 ------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
..++..|++||.+.+..++.++|||||||++||+++ |..|+....... ....+........+...+..
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-----VIKAIEEGYRLPAPMDCPAA 237 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-----HHHHHhCCCcCCCCCCCCHH
Confidence 112457999999998889999999999999999886 887754321111 11111111112223345667
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+.+++.+||+.+|.+||++.++++.|..+
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 88999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=318.58 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=201.2
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
..+.||+|+||.||+|.+.........+|+|.+...... ....+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYM 88 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcC
Confidence 456679999999999998764334457999998765322 2356899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc----
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS---- 228 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~---- 228 (512)
++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 89 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 166 (268)
T cd05063 89 ENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYT 166 (268)
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceeccccccccee
Confidence 99999999964 3467899999999999999999999999 99999999999999999999999999875543211
Q ss_pred ---cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 229 ---YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 229 ---~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...+..|+|||++.+..++.++|||||||++|||++ |+.|+....... ....+........+...+..+.+
T Consensus 167 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~ 241 (268)
T cd05063 167 TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-----VMKAINDGFRLPAPMDCPSAVYQ 241 (268)
T ss_pred ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-----HHHHHhcCCCCCCCCCCCHHHHH
Confidence 112356999999988889999999999999999998 887765322111 11111111222233345677899
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
++.+||+.+|++||++.++++.|..+
T Consensus 242 li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 242 LMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=314.46 Aligned_cols=246 Identities=27% Similarity=0.407 Sum_probs=203.7
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||.|+||.||+|........+..|++|.+....... .+.+.+|++++..++|+||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 5799999999999998632247889999998765443 568999999999999999999999999999999999999999
Q ss_pred CHHhhhhhcC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 156 TLAKHLFHWE-------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 156 ~L~~~l~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
+|.+++.... ...+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999997531 367999999999999999999999999 999999999999999999999999998765542
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhC-CCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-KHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
....++..|+|||.+.+..++.++|||||||++|+|+++ ..|+....... ....+........+..++..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 235 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-----VLEYLRKGYRLPKPEYCPDE 235 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCCCCCCccCChH
Confidence 234567889999999888899999999999999999994 66654331111 11111112222344556778
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+++.+||..+|.+|||+.+++++|+
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 236 LYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=326.00 Aligned_cols=253 Identities=19% Similarity=0.285 Sum_probs=199.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..|.+++.||+|+||.||+|.... +++.||+|.+...... ....+.+|+.++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecC---CCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 457788999999999999999887 7788999998754432 234688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++ +|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 83 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 83 FEYLDK-DLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred EeCCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 999975 88888864 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-------cchhhhc----------
Q 010340 227 --KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-------KNILHLM---------- 286 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------~~~~~~~---------- 286 (512)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||.......... ......+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 23457889999999865 458899999999999999999998775432110000 0000000
Q ss_pred ccccCC-------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 287 DSHLEG-------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 287 ~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...... ...+..+..+.+|+.+||..||.+|||+.+++++-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 000000 001234566889999999999999999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=327.85 Aligned_cols=251 Identities=16% Similarity=0.197 Sum_probs=195.7
Q ss_pred ccccCCCC--CCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 74 IVSESGEK--APNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 74 ~i~~lG~G--~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.||+| +|++||++.... +++.||||++....... .+.+.+|+.+++.++||||++++++|..++..++||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 78 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKP---TGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 78 (327)
T ss_pred hhhhccccccceEEEEEEeecc---cCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence 45678888 788999999987 88999999997654322 346788999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~---- 225 (512)
||+++|+|.+++.......+++..++.++.|++.||.|||+++ ++||||||+|||++.++.++++||+.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 9999999999997544556899999999999999999999999 99999999999999999999999986433211
Q ss_pred -------CCccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH----hccchhhhccc----
Q 010340 226 -------GKSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI----RGKNILHLMDS---- 288 (512)
Q Consensus 226 -------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~----~~~~~~~~~~~---- 288 (512)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||........ .........+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 112245678999999976 4589999999999999999999988753211100 00000000000
Q ss_pred --------------------------------ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 289 --------------------------------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 289 --------------------------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..........++.+.+|+.+||+.||++|||+.+++++-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 0000111234567889999999999999999999998743
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-41 Score=325.99 Aligned_cols=256 Identities=20% Similarity=0.304 Sum_probs=202.9
Q ss_pred cccccccCCCCCCCeEEEEEEcC----CCCCceEEEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD----GNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~----~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 144 (512)
.+.+...||+|+||.||++.... ....+..||+|.+..... .....+.+|+.+++.+ +||||+++++++.....
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 95 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCc
Confidence 34567889999999999997532 222456799999875432 2245789999999999 89999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 210 (512)
.++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~ 174 (304)
T cd05101 96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENN 174 (304)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCC
Confidence 999999999999999997532 235788899999999999999999999 99999999999999999
Q ss_pred CCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchh
Q 010340 211 DPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~ 283 (512)
.+||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+....... +.
T Consensus 175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~ 249 (304)
T cd05101 175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-----LF 249 (304)
T ss_pred cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-----HH
Confidence 99999999987654321 2234567999999988889999999999999999998 565543321111 11
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..+........+..++..+.+|+.+||+.+|.+|||+.++++.|..+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 250 KLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 1111111222344566778999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=324.91 Aligned_cols=248 Identities=19% Similarity=0.180 Sum_probs=197.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||++.... +++.||+|++.+... .....+..|+.++..++|+||+++++++.+.+..++
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l 78 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYL 78 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEE
Confidence 35678889999999999999987 778899999864321 123458889999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 79 v~ey~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 79 VMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EEeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999999964 3457899999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCC---
Q 010340 227 ----KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF--- 294 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 294 (512)
....||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...+........+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~ 232 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNHKERFQFPAQ 232 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH----HHHHhCCCccccCCCc
Confidence 1346899999999986 34588999999999999999999988754321111 1111111111111
Q ss_pred CHHHHHHHHHHHHHhhccCCCC--CCChHHHHHHh
Q 010340 295 SSEEATVVFDLASRCLQYEPRE--RPNTKDLVSTL 327 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~--Rps~~~vl~~L 327 (512)
....+..+.+|+.+||..++.. |+++.++++|-
T Consensus 233 ~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 233 VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence 2345677889999988654444 68999999883
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=306.87 Aligned_cols=244 Identities=20% Similarity=0.235 Sum_probs=206.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChh---HHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK---QFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+..+++.||+|.||.|-+++.+. +++.+|+|++++......+ .-..|-++|+..+||.+..+.-.|.....+|+
T Consensus 169 dFdfLKvLGkGTFGKVIL~rEKa---t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 169 DFDFLKVLGKGTFGKVILCREKA---TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred hhhHHHHhcCCccceEEEEeecc---cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 34478889999999999999988 8999999999987654443 35679999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc----
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS---- 223 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~---- 223 (512)
||||+.||.|+-+|. ..+.+++...+.+..+|+.||.|||+++ ||+||||.+|+|+|.+|++||.|||+++..
T Consensus 246 VMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 246 VMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred EEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhccccc
Confidence 999999999999886 4677999999999999999999999998 999999999999999999999999999853
Q ss_pred CCCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 224 RDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 224 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
....+++|||.|+|||++....|+.+.|+|.+|||+|||++|+.||...-.+ .-+.-++.. .-.+|...++++.
T Consensus 323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~----kLFeLIl~e--d~kFPr~ls~eAk 396 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE----KLFELILME--DLKFPRTLSPEAK 396 (516)
T ss_pred ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh----HHHHHHHhh--hccCCccCCHHHH
Confidence 2345789999999999999999999999999999999999999987643111 111111111 2246777888899
Q ss_pred HHHHHhhccCCCCCC-----ChHHHHHH
Q 010340 304 DLASRCLQYEPRERP-----NTKDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rp-----s~~~vl~~ 326 (512)
.|+..+|.+||.+|. .+.||.++
T Consensus 397 tLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 397 TLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 999999999999995 34555544
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=321.83 Aligned_cols=254 Identities=20% Similarity=0.294 Sum_probs=202.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+++.+.||+|+||.||+|..... ......+++|.+...... ....+.+|+.+++.++||||+++++.|...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 34677889999999999987532 113457999988754322 235788999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhc----------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee
Q 010340 149 AEYMPNDTLAKHLFHW----------------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~----------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill 206 (512)
|||+.+++|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEE
Confidence 9999999999998532 1235889999999999999999999998 9999999999999
Q ss_pred cCCCCCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhc
Q 010340 207 DENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRG 279 (512)
Q Consensus 207 ~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~ 279 (512)
++++.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|||+| |..|+......
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---- 236 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE---- 236 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH----
Confidence 999999999999987543221 2234678999999988889999999999999999999 87665432211
Q ss_pred cchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 280 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+............+...+..+.+++.+||+.+|++||++.++++.|+.+.
T Consensus 237 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 237 -RLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred -HHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 111222222223334455677899999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=326.90 Aligned_cols=244 Identities=13% Similarity=0.146 Sum_probs=192.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.+++.||+|+||.||+|.... +++.||+|+.... ....|+.++++++||||+++++++......++|||
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPG---QPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECC---CCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 46788999999999999999987 6788999985432 34579999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---CC
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---GK 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~---~~ 227 (512)
++. ++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..... ..
T Consensus 138 ~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 214 (357)
T PHA03209 138 HYS-SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL 214 (357)
T ss_pred ccC-CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCcccc
Confidence 995 588888864 4567999999999999999999999999 99999999999999999999999999875332 22
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH----HH--Hhccchhhhcc------cccC----
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL----DM--IRGKNILHLMD------SHLE---- 291 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~----~~--~~~~~~~~~~~------~~~~---- 291 (512)
...||+.|+|||++.+..++.++|||||||++|||+++..+++.... .. .....+..++. ..+.
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 294 (357)
T PHA03209 215 GLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPG 294 (357)
T ss_pred cccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCc
Confidence 45689999999999988999999999999999999997666532200 00 00000000000 0000
Q ss_pred ---------------CCCC-------HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 292 ---------------GNFS-------SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 292 ---------------~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.... ...+..+.+||.+||+.||.+|||+.++++|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 295 SRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred cHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0000 0123446679999999999999999999987
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=321.43 Aligned_cols=256 Identities=20% Similarity=0.258 Sum_probs=200.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCC-------------CceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGND-------------NRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLI 136 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~-------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~ 136 (512)
++.+++.||+|+||.||++.+..... .+..||+|.+...... ..+.+.+|++++++++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 46688899999999999998765321 2356899998865432 245788999999999999999999
Q ss_pred EEEeeCCeeEEEEEccCCCCHHhhhhhcC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec
Q 010340 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWE---------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 137 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~ 207 (512)
+++..++..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeec
Confidence 99999999999999999999999996432 126899999999999999999999999 99999999999999
Q ss_pred CCCCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh--CCCCCChhhHHHHhc
Q 010340 208 ENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS--GKHIPPSHALDMIRG 279 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt--g~~~~~~~~~~~~~~ 279 (512)
.++.++|+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..|+........ .
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~-~ 243 (296)
T cd05051 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQV-I 243 (296)
T ss_pred CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHH-H
Confidence 9999999999998754332 12344678999999988889999999999999999998 4444322111100 0
Q ss_pred cchhhhc---ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 280 KNILHLM---DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 280 ~~~~~~~---~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....... ........+...+.++.+++.+||+.||.+|||+.++++.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 244 ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1111110 011111223345577999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=325.29 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=204.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC----CCceEEEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 144 (512)
.+.+.+.||+|+||.||++...... .+...+|+|.+..... .....+.+|+.++..+ +||||+++++++...+.
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 98 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 4667889999999999999864321 1345799999986532 2235688899999999 89999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 210 (512)
.++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ ++||||||+|||++.++
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~ 177 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDN 177 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCC
Confidence 999999999999999997532 135899999999999999999999998 99999999999999999
Q ss_pred CCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchh
Q 010340 211 DPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~ 283 (512)
.+||+|||++....... ...+++.|+|||++.+..++.++|||||||++|||++ |..|+....... +.
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~-----~~ 252 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-----LF 252 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-----HH
Confidence 99999999987553321 1123467999999988889999999999999999998 665554322111 11
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..+........+...+..+.+|+.+||..+|.+|||+.++++.|..+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 253 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 1111122223445566788999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=320.00 Aligned_cols=248 Identities=20% Similarity=0.222 Sum_probs=198.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+++.||+|+||.||+|.+.. +++.||+|++....... ...+.+|+.++.+++||||+++++++...+..++|||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLL---TRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred chheeeeccCCCeEEEEEEEcC---CCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 4567889999999999999877 78889999987543222 3568899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--Cc
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KS 228 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--~~ 228 (512)
|+++++|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... ..
T Consensus 80 ~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 152 (279)
T cd06619 80 FMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKT 152 (279)
T ss_pred cCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccC
Confidence 99999996543 4788899999999999999999999 999999999999999999999999998764432 34
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH--hccch-hhhcccccCCCCCHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI--RGKNI-LHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
..++..|+|||++.+..++.++|||||||++|+|++|+.||........ ..... ..+.............++.+.++
T Consensus 153 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (279)
T cd06619 153 YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHF 232 (279)
T ss_pred CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHH
Confidence 5788999999999988899999999999999999999988653211000 00000 01111111111122345668899
Q ss_pred HHHhhccCCCCCCChHHHHHHhcc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+.+||+.+|++||++.+++++..-
T Consensus 233 i~~~l~~~P~~Rp~~~eil~~~~~ 256 (279)
T cd06619 233 ITQCMRKQPKERPAPENLMDHPFI 256 (279)
T ss_pred HHHHhhCChhhCCCHHHHhcCccc
Confidence 999999999999999999987544
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=321.41 Aligned_cols=248 Identities=17% Similarity=0.260 Sum_probs=205.6
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
-..+.+++.||.|+||.||+|.+.. +++.||||.+........+.+.+|+.+++.++||||+++++++......++|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVA---TGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcC---CCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 3457788899999999999999876 7888999999866555567889999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 95 ~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 95 MEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred EEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999999999885 346899999999999999999999999 999999999999999999999999998754332
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc-ccccCCCCCHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM-DSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 303 (512)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||....... ....+. ........+...+..+.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 246 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----ALYLIATNGTPELQNPEKLSPIFR 246 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhcCCcccCCcccCCHHHH
Confidence 23467889999999988889999999999999999999998765421110 000111 00111122344566788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHh
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
++|.+||..||.+||++.+++.+=
T Consensus 247 ~li~~~l~~dp~~Rpt~~~il~~~ 270 (296)
T cd06655 247 DFLNRCLEMDVEKRGSAKELLQHP 270 (296)
T ss_pred HHHHHHhhcChhhCCCHHHHhhCh
Confidence 999999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=323.04 Aligned_cols=252 Identities=19% Similarity=0.245 Sum_probs=201.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+++.||+|+||.||++.+.. ++..+|+|.+....... ..++.+|++++.+++||||++++++|..++..++|||
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRP---SGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcC---CCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 4577889999999999999887 77889999987543222 3468899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccCC--CC
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--GK 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--~~ 227 (512)
|+++++|.+++.. ...+++..+..++.||+.||.|||+. + ++|+||||+|||++.++.+||+|||++..... ..
T Consensus 80 y~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (308)
T cd06615 80 HMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 156 (308)
T ss_pred ccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccc
Confidence 9999999999973 46789999999999999999999984 6 99999999999999999999999999875433 23
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh---ccchhhh-------------------
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR---GKNILHL------------------- 285 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~~~~~~~------------------- 285 (512)
...++..|+|||++.+..++.++|||||||++|+|++|+.|+......... .......
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (308)
T cd06615 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRP 236 (308)
T ss_pred cCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccch
Confidence 456789999999998888999999999999999999999886532111100 0000000
Q ss_pred ------ccc---ccCCCCC-HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 286 ------MDS---HLEGNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 286 ------~~~---~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+. ...+..+ ...+..+.+|+.+||..+|++|||+.+++++..-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 237 MAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred hhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 000 0000111 1245568899999999999999999999998654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=317.18 Aligned_cols=250 Identities=22% Similarity=0.315 Sum_probs=195.5
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeC------Cee
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG------DER 145 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 145 (512)
+.+.||+|+||.||+|.+.... ....||||.+...... ..+.+.+|+.+++.++||||+++++++... ...
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDD-SILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred cccccCcccCceEEEeEEccCC-CeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4567899999999999987632 2246999998764322 245688999999999999999999987542 246
Q ss_pred EEEEEccCCCCHHhhhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 146 LLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
++||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCccc
Confidence 8999999999999987421 2345899999999999999999999998 9999999999999999999999999988
Q ss_pred ccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCC
Q 010340 222 NSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNF 294 (512)
Q Consensus 222 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (512)
...... ...+++.|++||++.+..++.++|||||||++|||++ |+.|+...... .....+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~ 235 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-----EIYDYLRQGNRLKQ 235 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCCCCC
Confidence 654322 2234667999999998889999999999999999999 66655432111 11111111111123
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 344566789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=325.79 Aligned_cols=257 Identities=20% Similarity=0.301 Sum_probs=203.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCC----CCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
+.+++.||+|+||.||++...... .....||+|.+...... ....+.+|+.++.++ +||||++++++|...+..
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 93 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCce
Confidence 567889999999999999864321 12346999988754322 245789999999999 899999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.
T Consensus 94 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~ 172 (334)
T cd05100 94 YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCc
Confidence 99999999999999996422 235788999999999999999999999 999999999999999999
Q ss_pred CeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhh
Q 010340 212 PRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILH 284 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~ 284 (512)
+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..|+........ ..
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-----~~ 247 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL-----FK 247 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH-----HH
Confidence 9999999987654322 1223467999999998889999999999999999998 6665543221111 11
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
.+........+...+..+.+++.+||+.+|.+|||+.++++.|..+....
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 248 LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11111222334445667889999999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=330.45 Aligned_cols=250 Identities=16% Similarity=0.185 Sum_probs=195.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCC----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 143 (512)
..|.+++.||+|+||.||++.+.. +++.||||++..... .....+.+|+.+++.++||||+++++++....
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTV---LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcC---CCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 456788899999999999999877 788999999975432 22456889999999999999999999986543
Q ss_pred --eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 144 --ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 144 --~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
..++||||+++ +|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 47999999976 6766663 24888999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-Hh------cc-----------
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-IR------GK----------- 280 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-~~------~~----------- 280 (512)
..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||....... +. +.
T Consensus 172 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 172 TACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred ccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 54322 34567899999999999899999999999999999999998875321100 00 00
Q ss_pred chhhhccc--ccC----------------CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 281 NILHLMDS--HLE----------------GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 281 ~~~~~~~~--~~~----------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
........ ... .......+..+.+|+.+||..||++|||+.+++++-.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000000 000 0001123456889999999999999999999998854
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-41 Score=335.96 Aligned_cols=249 Identities=20% Similarity=0.213 Sum_probs=195.6
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCC-----ee
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-----ER 145 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 145 (512)
.+++.||+|+||.||++.+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++.... ..
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 3 EPDRPIGYGAFGVVWSVTDPR---DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred cccceeeeCCCEEEEEEEECC---CCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 467888999999999999876 788999999875422 22357889999999999999999999998776 78
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 80 ~lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 80 YVVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 99999996 57888885 4567999999999999999999999999 99999999999999999999999999875432
Q ss_pred C-----CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------c-cc----------
Q 010340 226 G-----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------G-KN---------- 281 (512)
Q Consensus 226 ~-----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~-~~---------- 281 (512)
. ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||......... + ..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHH
Confidence 2 2345688999999997744 789999999999999999999877532110000 0 00
Q ss_pred hh-hhcccccCC-------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 282 IL-HLMDSHLEG-------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 282 ~~-~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.. .+....... ......++.+.+||.+||+.||.+|||+.+++++-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 236 ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 00 000000000 111223567889999999999999999999998743
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=315.87 Aligned_cols=243 Identities=21% Similarity=0.341 Sum_probs=200.4
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---------hHHHHHHHHHhcCCCCCccceEEEEeeCC
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---------KQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---------~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 143 (512)
.+...||.|+||.||+|.+.. +++.||+|.+........ +.+.+|+.++++++||||+++++++....
T Consensus 3 ~~~~~ig~g~~~~v~~a~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 3 IKGALIGSGSFGSVYLGMNAS---SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD 79 (267)
T ss_pred cccceeecCCCeEEEEEEecC---CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Confidence 345678999999999999876 678899999875543221 45889999999999999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
..++||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred ccEEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 9999999999999999996 3467899999999999999999999998 999999999999999999999999998765
Q ss_pred CCC----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 224 RDG----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 224 ~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
... ....++..|+|||.+.+..++.++|||||||++|+|++|+.|+...... ..+..... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~-~~~~~ 231 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QAIFKIGE-NASPE 231 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HHHHHHhc-cCCCc
Confidence 421 1235778999999998888999999999999999999999886542110 11111111 12233
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+...+..+.+++.+||+.||.+||++.+++++
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 232 IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 445566778999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=319.70 Aligned_cols=258 Identities=24% Similarity=0.342 Sum_probs=205.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCC-CCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEee--CCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG-NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 146 (512)
.+.+++.||+|+||.||++.+... ..+++.||||++...... ..+.|.+|+++++.++||||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 455778899999999999987532 225788999999866543 35679999999999999999999999987 56789
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 85 lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 85 LIMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred EEEecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 99999999999999964 2336999999999999999999999999 999999999999999999999999998765532
Q ss_pred Cc-------cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh----------ccchhhhcccc
Q 010340 227 KS-------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR----------GKNILHLMDSH 289 (512)
Q Consensus 227 ~~-------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~----------~~~~~~~~~~~ 289 (512)
.. ..++..|++||.+.+..++.++||||||+++|||+||..|+......... ...+...+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG 242 (284)
T ss_pred CcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence 11 12345699999998888999999999999999999999775432111100 01111122222
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.....+..++..+.+|+.+||..+|.+|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 243 ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 22222344557799999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-41 Score=330.96 Aligned_cols=237 Identities=19% Similarity=0.198 Sum_probs=188.9
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcC---CCCCccceEEEEeeCCeeEEEEEc
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL---RHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
||+|+||.||+|.+.. +++.||||++....... ...+..|..++..+ .||||+++++++.+....++||||
T Consensus 1 lG~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKD---TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECC---CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcC
Confidence 6999999999999987 78899999987543222 23455677777655 699999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CC
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GK 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~ 227 (512)
+++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... ..
T Consensus 78 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 78 MSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred CCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 99999999986 4567999999999999999999999999 99999999999999999999999999875322 22
Q ss_pred ccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC-HHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-SEEATVVFDL 305 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 305 (512)
...||+.|+|||++.+. .++.++|||||||++|+|+||+.||......... ..+.... ..++ ...+..+.++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~----~~i~~~~--~~~~~~~~~~~~~~l 228 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMY----RNIAFGK--VRFPKNVLSDEGRQF 228 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHH----HHHHcCC--CCCCCccCCHHHHHH
Confidence 45689999999998765 4899999999999999999999887543221111 0111000 0111 2245667899
Q ss_pred HHHhhccCCCCCC----ChHHHHHH
Q 010340 306 ASRCLQYEPRERP----NTKDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rp----s~~~vl~~ 326 (512)
+.+||..||.+|| ++.+++++
T Consensus 229 i~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 229 VKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 9999999999998 56666665
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=331.28 Aligned_cols=249 Identities=17% Similarity=0.209 Sum_probs=195.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeC-----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 142 (512)
..|.+++.||+|+||.||++.+.. +++.||||++...... ....+.+|+.+++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecC---CCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 466788899999999999999876 7788999999754322 235688999999999999999999998643
Q ss_pred -CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
...++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccc
Confidence 347999999976 6777764 24889999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc------------------
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK------------------ 280 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------------------ 280 (512)
..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus 168 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (355)
T cd07874 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_pred cCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence 65432 245689999999999988899999999999999999999988754211000000
Q ss_pred chhhhccc---------------cc---CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 281 NILHLMDS---------------HL---EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 281 ~~~~~~~~---------------~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
........ .. ....+...+..+.+||.+||..||++|||+.+++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 00000000 00 0001122345678999999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=349.66 Aligned_cols=250 Identities=17% Similarity=0.220 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee--CCe
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD--GDE 144 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 144 (512)
+..|.+++.||.|+||.||++.+.. ++..||+|++....... ...|..|+.+|..|+|||||+++++|.+ ...
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~---tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKR---TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECC---CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 3567789999999999999999987 78899999987654322 3568999999999999999999998865 456
Q ss_pred eEEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC------CccccccCccceeecC--------
Q 010340 145 RLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEG------RPLYHDLNAYRVLFDE-------- 208 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~iiH~Dlkp~Nill~~-------- 208 (512)
++|||||+++|+|.++|... ....+++..++.|+.||+.||.|||+.+ +||||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999999642 2357999999999999999999999842 2999999999999964
Q ss_pred ---------CCCCeeecccCccccCCC---CccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCCCChhhH
Q 010340 209 ---------NGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHAL 274 (512)
Q Consensus 209 ---------~~~~kl~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~ 274 (512)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++||||||||||||+||..||.....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 345899999998765432 34568999999999864 4488999999999999999999988753211
Q ss_pred HHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 275 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. ..+...+..... ......+..+.+||..||..+|.+||++.+++.+
T Consensus 249 ~----~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 249 F----SQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred H----HHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 0 011111111110 1112345678899999999999999999999865
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=317.27 Aligned_cols=254 Identities=17% Similarity=0.243 Sum_probs=202.7
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee
Q 010340 62 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD 141 (512)
Q Consensus 62 ~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 141 (512)
++.++++++...+ ||+|+||.||+|.+.. ++..||+|.+........+.+.+|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~~~---lg~g~~g~v~~~~~~~---~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 76 (268)
T cd06624 3 YEYEYDENGERVV---LGKGTYGIVYAARDLS---TQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE 76 (268)
T ss_pred cccccccCCceEE---EecCCceEEEEeEecC---CCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc
Confidence 3445666665544 5999999999999876 778899999886654455679999999999999999999999999
Q ss_pred CCeeEEEEEccCCCCHHhhhhhcCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CCCCeeeccc
Q 010340 142 GDERLLVAEYMPNDTLAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFG 218 (512)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg 218 (512)
++..++||||+++++|.+++... ...+ ++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.++|+|||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg 154 (268)
T cd06624 77 NGFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFG 154 (268)
T ss_pred CCEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecch
Confidence 99999999999999999999742 2345 88889999999999999999998 999999999999976 6799999999
Q ss_pred CccccCCC----CccccCcccCCcccccCCC--CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC
Q 010340 219 LMKNSRDG----KSYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 219 ~a~~~~~~----~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
++...... ....+++.|+|||++.+.. ++.++||||||+++|+|++|+.|+......... ...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~ 231 (268)
T cd06624 155 TSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA---MFKVGMFKIHP 231 (268)
T ss_pred hheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh---HhhhhhhccCC
Confidence 98654321 2345788999999986644 788999999999999999999876432111000 00000011122
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.++...++.+.+++.+||+.+|.+|||+.+++.+
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 3455566778999999999999999999999886
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=319.63 Aligned_cols=253 Identities=20% Similarity=0.231 Sum_probs=210.0
Q ss_pred HHHHHHh-cCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccce
Q 010340 60 ADLRAAT-NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANL 135 (512)
Q Consensus 60 ~~~~~~~-~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l 135 (512)
-|....| +.|+.++++ |+||||.||-++.+. +|+.+|.|++.+... .......+|-.+|.+++.+.||.+
T Consensus 177 lE~qpvt~n~F~~~Rvl---GkGGFGEV~acqvra---TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsl 250 (591)
T KOG0986|consen 177 LELQPVTKNTFRVYRVL---GKGGFGEVCACQVRA---TGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSL 250 (591)
T ss_pred HHhhhccccceeeeEEE---ecccccceeEEEEec---chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEE
Confidence 3343344 346666665 999999999999988 999999999976543 223468899999999999999999
Q ss_pred EEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeee
Q 010340 136 IGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (512)
Q Consensus 136 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 215 (512)
--.|+..+.+++||..|.||+|.-+|.+..+..+++..++.++.+|+.||.+||+.+ ||+|||||+|||+|+.|+++|+
T Consensus 251 aYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRIS 329 (591)
T KOG0986|consen 251 AYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRIS 329 (591)
T ss_pred eeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEee
Confidence 999999999999999999999999998777778999999999999999999999999 9999999999999999999999
Q ss_pred cccCccccCCCC---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC
Q 010340 216 CFGLMKNSRDGK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 216 Dfg~a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
|+|+|..+.... .-+||.+|||||++.++.|+...|+|||||+||||+.|+.||..... ......+.+.+. ....
T Consensus 330 DLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke-Kvk~eEvdrr~~-~~~~ 407 (591)
T KOG0986|consen 330 DLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE-KVKREEVDRRTL-EDPE 407 (591)
T ss_pred ccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh-hhhHHHHHHHHh-cchh
Confidence 999998876654 34789999999999999999999999999999999999998754311 111111111111 1123
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChH
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTK 321 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 321 (512)
.++...++++.+|.+.+|.+||.+|....
T Consensus 408 ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 408 EYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 46677788899999999999999997654
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=327.84 Aligned_cols=250 Identities=16% Similarity=0.186 Sum_probs=195.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeC-----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 142 (512)
..|.+++.||+|+||.||++.+.. +++.||||++..... .....+.+|+.+++.++||||+++++++...
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECC---CCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 456688899999999999999877 778899999975432 2245688999999999999999999987543
Q ss_pred -CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
...++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 357999999975 7877774 24888999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccch----------------
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI---------------- 282 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~---------------- 282 (512)
..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||............+
T Consensus 175 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T cd07875 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254 (364)
T ss_pred ccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH
Confidence 65432 34568999999999999899999999999999999999998875321100000000
Q ss_pred --hhh---------------ccccc---CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 283 --LHL---------------MDSHL---EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 283 --~~~---------------~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
... ..... ...........+.+||.+||+.||.+|||+.++++|-.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~ 320 (364)
T cd07875 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320 (364)
T ss_pred HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 000 00000 00011112356789999999999999999999998743
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=329.32 Aligned_cols=250 Identities=18% Similarity=0.174 Sum_probs=198.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.+++.||.|+||.||++...... .++.||||.+... ..+.+|+++|+.++||||+++++++......++|||
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~-~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDE-QRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCc-cceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 4678899999999999999865432 5678999998643 346789999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
++. ++|.+++. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++......
T Consensus 167 ~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 167 KYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred hcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 995 58888884 4567999999999999999999999999 999999999999999999999999998754332
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHH--------HHhcc---c----------hh
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD--------MIRGK---N----------IL 283 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~--------~~~~~---~----------~~ 283 (512)
....||+.|+|||++.+..++.++|||||||++|||++|+.||+..... ..... . +.
T Consensus 243 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~ 322 (392)
T PHA03207 243 QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLC 322 (392)
T ss_pred cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHH
Confidence 2356899999999999889999999999999999999999887643110 00000 0 00
Q ss_pred h---hcccccCCCC--C-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 284 H---LMDSHLEGNF--S-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 284 ~---~~~~~~~~~~--~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
. .........+ + ...+..+.++|.+||..||++|||+.+++.+-...
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~ 379 (392)
T PHA03207 323 KHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT 379 (392)
T ss_pred HHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence 0 0000001111 1 11245678899999999999999999999985443
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=315.38 Aligned_cols=248 Identities=24% Similarity=0.301 Sum_probs=195.5
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
.||+|+||.||+|.+.++. ....+++|.+..... ...+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred cCCCCCCceEEEEEEcCCC-CeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 4699999999999987632 223578898875332 2245788999999999 899999999999999999999999999
Q ss_pred CCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCc
Q 010340 155 DTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (512)
Q Consensus 155 g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a 220 (512)
|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||++
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCc
Confidence 99999996421 134789999999999999999999998 999999999999999999999999998
Q ss_pred cccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCH
Q 010340 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296 (512)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (512)
...... .....+..|+|||++.+..++.++|||||||++|||++ |..||....... ....+........+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~ 234 (270)
T cd05047 160 RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQGYRLEKPL 234 (270)
T ss_pred cccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-----HHHHHhCCCCCCCCC
Confidence 633211 11223567999999988889999999999999999997 887754321111 111111111222333
Q ss_pred HHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 297 ~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
..+..+.+++.+||..+|.+|||+.++++.|..+.
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 235 NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 45567889999999999999999999999997653
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=312.58 Aligned_cols=250 Identities=18% Similarity=0.186 Sum_probs=203.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+++.||.|+||.||+|.... +++.+++|++........+.+.+|+.+++.++||||+++++++......+++||
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIA---TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecC---CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 35577888999999999999977 677899999987655556789999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
|+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 158 (262)
T cd06613 81 YCGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKR 158 (262)
T ss_pred CCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhcc
Confidence 9999999998864 3367999999999999999999999998 999999999999999999999999998764432
Q ss_pred CccccCcccCCcccccCC---CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNG---RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
....++..|+|||.+.+. .++.++|||||||++|+|+||+.|+.................. ..........+..+.
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 237 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP-PPKLKDKEKWSPVFH 237 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-CccccchhhhhHHHH
Confidence 234678889999999776 7899999999999999999999876532111000000000000 011112344567789
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 010340 304 DLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+++.+||..+|.+|||+.+++.+
T Consensus 238 ~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 238 DFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHHHcCCChhhCCCHHHHhcC
Confidence 99999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=313.82 Aligned_cols=246 Identities=24% Similarity=0.364 Sum_probs=199.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.++.+.+.||+|+||.||++.. +++.||+|.+.... ..+.+.+|+.+++.++||||+++++++... ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-----TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-----CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 4566788899999999999874 56679999986543 346789999999999999999999998764 479999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-Cc
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KS 228 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~~ 228 (512)
||+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~ 156 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDN 156 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCC
Confidence 9999999999997655557899999999999999999999998 999999999999999999999999998764432 22
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
...+..|+|||.+.+..++.++|||||||++|+|++ |+.|+........ ............+...+..+.+++.
T Consensus 157 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~ 231 (254)
T cd05083 157 SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV-----KECVEKGYRMEPPEGCPADVYVLMT 231 (254)
T ss_pred CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH-----HHHHhCCCCCCCCCcCCHHHHHHHH
Confidence 334567999999988889999999999999999998 7766543321111 1111112222233445677889999
Q ss_pred HhhccCCCCCCChHHHHHHhcc
Q 010340 308 RCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+||+.+|.+||++.+++..|+.
T Consensus 232 ~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 232 SCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHcCCChhhCcCHHHHHHHHcc
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=318.57 Aligned_cols=256 Identities=20% Similarity=0.262 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+++.+++.||+|+||.||++.+.. +++.||+|++...... ..+.+.+|+++++.++||||+++++++...+.+++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIP---TGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcC---CCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 356688899999999999999987 7888999998754322 246799999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
|||+++++|.+++. ..+.+++..+..++.+++.||.|||+ .+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 82 MEFMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred EecCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 99999999999986 34578999999999999999999997 46 99999999999999999999999999865432
Q ss_pred CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH---Hhccchhhhccccc---CCCCC-HHH
Q 010340 226 GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM---IRGKNILHLMDSHL---EGNFS-SEE 298 (512)
Q Consensus 226 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~-~~~ 298 (512)
.....++..|+|||++.+..++.++|||||||++|+|+||+.|+....... .....+...+.... ...++ ...
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDF 238 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhc
Confidence 224568899999999988889999999999999999999998865432110 00011111111111 11122 235
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+..+.+|+.+||+.||.+|||+.+++++...++
T Consensus 239 ~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 239 PEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 667899999999999999999999999865544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=312.85 Aligned_cols=247 Identities=23% Similarity=0.318 Sum_probs=198.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+.+.+.||.|+||.||++.+.. +..+|+|.+.... ...+.+.+|+.+++.++||||+++++++. ....++|||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~----~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNG----TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcC----CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence 35567789999999999998864 3359999987543 23467899999999999999999999885 456899999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 999999999997544556899999999999999999999999 9999999999999999999999999987653322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...++..|+|||.+.+..++.++|||||||++|||+| |..|+........ ...+........+...+..+.+
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV-----LEQVERGYRMPCPQGCPESLHE 234 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCcccCHHHHH
Confidence 2234677999999988889999999999999999999 7766543321111 1111111122334456677999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhcc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++.+||..||++||++.++++.|+.
T Consensus 235 li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 235 LMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHccCCcccCcCHHHHHHHHhc
Confidence 9999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=322.43 Aligned_cols=255 Identities=22% Similarity=0.315 Sum_probs=202.0
Q ss_pred ccccccCCCCCCCeEEEEEEcCC----CCCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDG----NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~----~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
+.+++.||+|+||.||++..... ......+|+|.+...... ....+.+|+.+++.+ +||||+++++++.+.+..
T Consensus 14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (314)
T cd05099 14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL 93 (314)
T ss_pred eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence 44678899999999999986421 124567999998754322 235688999999999 699999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.
T Consensus 94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCc
Confidence 99999999999999996532 245899999999999999999999998 999999999999999999
Q ss_pred CeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhh
Q 010340 212 PRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILH 284 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~ 284 (512)
+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|+|++ |..|+....... ...
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-----~~~ 247 (314)
T cd05099 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE-----LFK 247 (314)
T ss_pred EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH-----HHH
Confidence 9999999997654321 1123457999999988889999999999999999999 666654321111 111
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..........+..++..+.+++.+||..+|++|||+.++++.|..+..
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 248 LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 111111223344556678899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=313.20 Aligned_cols=246 Identities=15% Similarity=0.192 Sum_probs=202.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEee-CCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 148 (512)
|.+++.||.|++|.||++.+.. +++.||+|.+...... ..+.+.+|++++++++|+||+++++.+.. ....++|
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRT---DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcC---CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence 5678889999999999999987 6788999998754432 23568899999999999999999998864 4467899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++++|.+++.......+++.+++.++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999999999997645567899999999999999999999999 999999999999999999999999998765332
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....+++.|+|||++.+..++.++|||||||++++|++|+.|+......... ..+.. ......+...+..+.+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~ 232 (257)
T cd08223 158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLV----YRIIE-GKLPPMPKDYSPELGE 232 (257)
T ss_pred ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHh-cCCCCCccccCHHHHH
Confidence 2345788999999999888999999999999999999999876532211110 11111 1112334456677999
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 010340 305 LASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~ 326 (512)
++.+||+.+|++|||+.+++++
T Consensus 233 li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 233 LIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHhccCcccCCCHHHHhcC
Confidence 9999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=297.85 Aligned_cols=245 Identities=18% Similarity=0.136 Sum_probs=201.0
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEee----CCeeEEEEE
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD----GDERLLVAE 150 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~~lv~E 150 (512)
+.||-|-.|.|-.+..+. ++..+|+|++... ...++|+++.-.. .|||||++++++.. ...+.+|||
T Consensus 68 qvLG~GinGkV~~C~~k~---T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE 139 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKR---TQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVME 139 (400)
T ss_pred hhhccccCCceEEEEecc---chhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeee
Confidence 367999999999999998 8889999998643 4688999998877 79999999999864 356789999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec---CCCCCeeecccCccccCCC-
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~~- 226 (512)
+++||.|+..++.+....+++.++..|++||+.|+.|||+.+ |.||||||+|+|.. .+-.+||+|||+|+.....
T Consensus 140 ~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~ 218 (400)
T KOG0604|consen 140 CMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG 218 (400)
T ss_pred cccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCc
Confidence 999999999999877888999999999999999999999999 99999999999996 4557999999999876533
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc--ccccCCCCCHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM--DSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 302 (512)
.+.+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||+...-..+...-...+. ...+..+-....++..
T Consensus 219 ~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~a 298 (400)
T KOG0604|consen 219 DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAA 298 (400)
T ss_pred cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHH
Confidence 355679999999999888999999999999999999999988765321111110001111 1112222235678889
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.++|+.+|..+|.+|.|+.+++++-+-
T Consensus 299 KdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 299 KDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred HHHHHHHhcCCchhheeHHHhhcCchh
Confidence 999999999999999999999987543
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=315.98 Aligned_cols=245 Identities=18% Similarity=0.275 Sum_probs=202.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC-CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+|.+++.||.|+||.||+|.+.. +++.||+|++.... ......+.+|+.+++.++|+||+++++++.++...++|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKR---TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECC---CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 34567888999999999999987 78899999987654 223457889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 79 EYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred EeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence 99999999999953 38899999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH-HHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE-EATVVFD 304 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 304 (512)
....++..|+|||++.+..++.++|||||||++|+|+||+.|+...... .....+........+.. .+..+.+
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVLFLIPKNNPPSLEGNKFSKPFKD 229 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHHHHhhhcCCCCCcccccCHHHHH
Confidence 2456788899999998888999999999999999999999776432111 11111111112222222 5667889
Q ss_pred HHHHhhccCCCCCCChHHHHHHh
Q 010340 305 LASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L 327 (512)
++.+||..+|++|||+++++++-
T Consensus 230 ~l~~~l~~~p~~Rpt~~~il~~~ 252 (274)
T cd06609 230 FVSLCLNKDPKERPSAKELLKHK 252 (274)
T ss_pred HHHHHhhCChhhCcCHHHHhhCh
Confidence 99999999999999999998863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=328.27 Aligned_cols=257 Identities=19% Similarity=0.264 Sum_probs=199.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeC-Cee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDG-DER 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~~ 145 (512)
.+.+++.||.|+||.||+|.+... ..+++.||||+++...... ...+.+|+.++.++ +||||++++++|... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 456788999999999999986421 2267889999997644322 34688999999999 789999999988654 467
Q ss_pred EEEEEccCCCCHHhhhhhcC------------------------------------------------------------
Q 010340 146 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 165 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~------------------------------------------------------------ 165 (512)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999986421
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC------ccccCcc
Q 010340 166 -----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------SYSTNLA 234 (512)
Q Consensus 166 -----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~ 234 (512)
...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++....... ...++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 124688889999999999999999999 9999999999999999999999999987643221 2234567
Q ss_pred cCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccC
Q 010340 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313 (512)
Q Consensus 235 y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 313 (512)
|+|||++.+..++.++|||||||++|+|++ |..|+....... .....+........+...++.+.+++..||+.|
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH----HHHHHHhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999988889999999999999999997 776654321110 011111111122223334566889999999999
Q ss_pred CCCCCChHHHHHHhccccC
Q 010340 314 PRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 314 p~~Rps~~~vl~~L~~~~~ 332 (512)
|++|||+.+|+++|+.+..
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=311.55 Aligned_cols=247 Identities=19% Similarity=0.232 Sum_probs=203.9
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|.+++.||.|+||.||.+.... +++.+++|.+..... .....+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTE---DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred ceEeeEecccCCceEEEEEEcC---CCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEE
Confidence 4577888999999999999887 788899999875432 22457889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 157 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM 157 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence 9999999999997544567899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....+++.|+|||++.+..++.++||||||+++|+|++|..|+........ ...+... .....+...+..+.++
T Consensus 158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~ 232 (256)
T cd08221 158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL----VVKIVQG-NYTPVVSVYSSELISL 232 (256)
T ss_pred ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcC-CCCCCccccCHHHHHH
Confidence 245678999999999888899999999999999999999987653211110 1111111 1112223456678899
Q ss_pred HHHhhccCCCCCCChHHHHHHh
Q 010340 306 ASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L 327 (512)
+.+||..+|.+||++.++++++
T Consensus 233 i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHcccCcccCCCHHHHhhCc
Confidence 9999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=310.88 Aligned_cols=241 Identities=25% Similarity=0.398 Sum_probs=195.3
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||.|+||.||+|... ++..||+|.+....... ...+.+|+++++.++||||+++++++...+..++||||++++
T Consensus 2 ~ig~g~~g~vy~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 2 LLGKGNFGEVFKGTLK----DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred ccCCCCCceEEEEEec----CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 4699999999999865 56679999987654222 246889999999999999999999999999999999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-----ccc
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-----SYS 230 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~ 230 (512)
+|.+++.. ....+++..++.++.|++.+|.|||+.+ ++|+||||+||+++.++.+||+|||++....... ...
T Consensus 78 ~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (250)
T cd05085 78 DFLSFLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ 155 (250)
T ss_pred cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence 99999864 3456899999999999999999999999 9999999999999999999999999986543321 123
Q ss_pred cCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHh
Q 010340 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309 (512)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 309 (512)
++..|+|||++.+..++.++||||||+++|++++ |..|+......... ..+........+...+..+.+++.+|
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~ 230 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR-----EQVEKGYRMSCPQKCPDDVYKVMQRC 230 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence 3567999999988889999999999999999998 77666443221111 11111112233344567789999999
Q ss_pred hccCCCCCCChHHHHHHhc
Q 010340 310 LQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 310 l~~~p~~Rps~~~vl~~L~ 328 (512)
|+.+|++||++.++++.|.
T Consensus 231 l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 231 WDYKPENRPKFSELQKELA 249 (250)
T ss_pred cccCcccCCCHHHHHHHhc
Confidence 9999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=312.21 Aligned_cols=242 Identities=24% Similarity=0.372 Sum_probs=191.7
Q ss_pred cCCCCCCCeEEEEEEcCCC-------CCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 77 ESGEKAPNVVYKGRLQDGN-------DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.||+|+||.||+|.+.... .....+++|.+...... ...+.+|+.+++.++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 5799999999999997632 01145888887655433 5789999999999999999999999988 7789999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-------CCeeecccCccc
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-------DPRLSCFGLMKN 222 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-------~~kl~Dfg~a~~ 222 (512)
||+++|+|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHR-EKNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 99999999999974 2337899999999999999999999998 99999999999999887 799999999987
Q ss_pred cCCCCccccCcccCCcccccCC--CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 223 SRDGKSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 223 ~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
........++..|+|||++.+. .++.++|||||||++|+|++|..+++..... ......... ....+.....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~----~~~~~~~~~--~~~~~~~~~~ 231 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS----SEKERFYQD--QHRLPMPDCA 231 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc----hhHHHHHhc--CCCCCCCCch
Confidence 6655556677889999999776 6899999999999999999964443322110 000011100 0111111126
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+.+++.+||..+|.+|||+.++++.|+
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 232 ELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 7889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=317.55 Aligned_cols=255 Identities=20% Similarity=0.274 Sum_probs=197.5
Q ss_pred ccccccCCCCCCCeEEEEEEcC-------------CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQD-------------GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIG 137 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~-------------~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~ 137 (512)
+.+++.||+|+||.||++.... ...+...||+|++...... ....+.+|+.+++.++|+||+++++
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~ 86 (296)
T cd05095 7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLA 86 (296)
T ss_pred ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 4577889999999999986542 1114567999999865322 2357899999999999999999999
Q ss_pred EEeeCCeeEEEEEccCCCCHHhhhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC
Q 010340 138 YCCDGDERLLVAEYMPNDTLAKHLFHWEN---------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (512)
Q Consensus 138 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~ 208 (512)
++...+..++||||+++++|.+++..... ..+++..+..++.||+.||.|||+.+ ++|+||||+|||++.
T Consensus 87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~ 165 (296)
T cd05095 87 VCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGK 165 (296)
T ss_pred EEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcC
Confidence 99999999999999999999999964321 24778899999999999999999999 999999999999999
Q ss_pred CCCCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh--CCCCCChhhHHHHhcc
Q 010340 209 NGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS--GKHIPPSHALDMIRGK 280 (512)
Q Consensus 209 ~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt--g~~~~~~~~~~~~~~~ 280 (512)
++.++|+|||+++...... ...+++.|++||+..++.++.++|||||||++|||++ |..|+..........
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~- 244 (296)
T cd05095 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE- 244 (296)
T ss_pred CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH-
Confidence 9999999999987643321 2233568999999888889999999999999999998 544543221111110
Q ss_pred chhhhcc---cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 281 NILHLMD---SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 281 ~~~~~~~---~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....... .......+..++..+.+|+.+||+.||.+||++.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000000 00111223345577899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=315.03 Aligned_cols=246 Identities=19% Similarity=0.265 Sum_probs=204.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+..++.||.|+||.||+|.+.. ++..||||++..... .....+.+|+.+++.+.||||+++++++.++...++|||
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNR---TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEcc---CCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 4467788999999999999887 778899999875432 224578999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
|+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06640 83 YLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred cCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc
Confidence 999999999985 356899999999999999999999998 999999999999999999999999998664432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
....++..|+|||++.+..++.++|+|||||++|||+||..|+...... ..............+...+..+.+++
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li 233 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLIPKNNPPTLTGEFSKPFKEFI 233 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhhhcCCCCCCchhhhHHHHHHH
Confidence 2335678899999998888999999999999999999999775432111 11111112223344556778899999
Q ss_pred HHhhccCCCCCCChHHHHHHhcc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+||+.+|++||++.+++.+-.-
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~~~~ 256 (277)
T cd06640 234 DACLNKDPSFRPTAKELLKHKFI 256 (277)
T ss_pred HHHcccCcccCcCHHHHHhChHh
Confidence 99999999999999999988543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=317.71 Aligned_cols=244 Identities=20% Similarity=0.297 Sum_probs=200.8
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
..++.||.|+||.||+|.+.. +++.||+|.+....... .+.+.+|++++++++||||+++++++..+...++||||
T Consensus 7 ~~~~~l~~g~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 7 TKLERIGKGSFGEVYKGIDNR---TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHhcCCCCeeEEEEEEcC---CCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 356678999999999999876 77889999987543222 35689999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC----
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 227 (512)
+++++|.+++. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06642 84 LGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred cCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhh
Confidence 99999999884 457899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
...++..|+|||++.+..++.++|||||||++|||++|+.|+...... ..................+..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06642 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-----RVLFLIPKNSPPTLEGQYSKPFKEFVE 234 (277)
T ss_pred cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-----hHHhhhhcCCCCCCCcccCHHHHHHHH
Confidence 235788899999998888999999999999999999999775422110 111111111222233445667889999
Q ss_pred HhhccCCCCCCChHHHHHHhc
Q 010340 308 RCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+||+.+|.+||++.+++++-.
T Consensus 235 ~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 235 ACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred HHccCCcccCcCHHHHHHhHH
Confidence 999999999999999999743
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=312.68 Aligned_cols=248 Identities=26% Similarity=0.372 Sum_probs=202.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+.+.||.|+||.||++.+. +++.||||.+.... ...+.+.+|+.++++++|+||+++++++......++|||
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~----~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWN----GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred heeeeeeeccCcceEEEEEEEc----CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 4557788999999999999976 34669999988644 345789999999999999999999999998889999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA 160 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence 999999999997655567999999999999999999999998 9999999999999999999999999987654321
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....+..|+|||.+.+..++.++|||||||++|+|++ |+.|+....... .............+...+..+.+
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 235 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-----VLEQVERGYRMPRPPNCPEELYD 235 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHHHH
Confidence 2233567999999998889999999999999999999 776654321111 11111111122233344667899
Q ss_pred HHHHhhccCCCCCCChHHHHHHhcc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++.+||..+|++||++.++++.|+.
T Consensus 236 ~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 236 LMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHcccCcccCCCHHHHHHHHhc
Confidence 9999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=319.18 Aligned_cols=256 Identities=20% Similarity=0.254 Sum_probs=197.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC-----------CCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN-----------DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGY 138 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~-----------~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~ 138 (512)
.+.+.+.||+|+||.||++...... .....||||.++...... ...|.+|++++++++|+||++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 5667889999999999999875421 123469999997653222 3468999999999999999999999
Q ss_pred EeeCCeeEEEEEccCCCCHHhhhhhcC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC
Q 010340 139 CCDGDERLLVAEYMPNDTLAKHLFHWE----------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (512)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~ 208 (512)
+...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+|||++.
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~ 164 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGN 164 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcC
Confidence 999999999999999999999985421 124788999999999999999999999 999999999999999
Q ss_pred CCCCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhC--CCCCChhhHHHHhcc
Q 010340 209 NGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG--KHIPPSHALDMIRGK 280 (512)
Q Consensus 209 ~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg--~~~~~~~~~~~~~~~ 280 (512)
++.+||+|||++....... ...++..|+|||++.++.++.++|||||||++|+|+++ ..|+..........
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~- 243 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE- 243 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH-
Confidence 9999999999987543321 12335689999999888899999999999999999984 33433211111100
Q ss_pred chhhhc---ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 281 NILHLM---DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 281 ~~~~~~---~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...... ........++..+..+.+|+.+||+.||++|||+.+|++.|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 244 NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 001100 011111223334567999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=321.71 Aligned_cols=246 Identities=18% Similarity=0.260 Sum_probs=185.8
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee--CCeeEEEEEccC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLLVAEYMP 153 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~ 153 (512)
.+||+|+||.||+|....+. +++.||+|.+.... ....+.+|+.+|++++||||+++++++.. ....++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~-~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGK-DDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred cccccCCCeEEEEEEEccCC-CCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 57899999999999976433 56789999987543 23467899999999999999999999864 456899999996
Q ss_pred CCCHHhhhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee----cCCCCCeeecccCccc
Q 010340 154 NDTLAKHLFHW-------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMKN 222 (512)
Q Consensus 154 ~g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfg~a~~ 222 (512)
+ +|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 4 888887532 1235899999999999999999999999 9999999999999 4567899999999976
Q ss_pred cCCC-------CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh--------ccchhhhc
Q 010340 223 SRDG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR--------GKNILHLM 286 (512)
Q Consensus 223 ~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~--------~~~~~~~~ 286 (512)
.... ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.....+... ...+....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 4321 245678999999999774 5899999999999999999999876422110000 00000000
Q ss_pred ---------------------ccccCC-----CC-------CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 287 ---------------------DSHLEG-----NF-------SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 287 ---------------------~~~~~~-----~~-------~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...... .. .......+.+|+.+||+.||.+|||++++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 00 00112357899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=317.70 Aligned_cols=253 Identities=23% Similarity=0.320 Sum_probs=199.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||.||++..... ..++..||+|++....... ...+.+|+.++++++||||+++++++.++...++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL 85 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence 355788899999999999987531 1256789999987543222 3568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec
Q 010340 148 VAEYMPNDTLAKHLFHWE--------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~ 207 (512)
||||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|||++
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~ 164 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVG 164 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEec
Confidence 999999999999996421 124788899999999999999999998 99999999999999
Q ss_pred CCCCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhcc
Q 010340 208 ENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGK 280 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~ 280 (512)
.++.++|+|||++...... .....+..|+|||.+.+..++.++|||||||++|||++ |..|+........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~--- 241 (288)
T cd05050 165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV--- 241 (288)
T ss_pred CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---
Confidence 9999999999998754322 12234567999999988889999999999999999998 7666543211111
Q ss_pred chhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 281 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
...+........+...+..+.+|+.+||+.+|.+|||+.++++.|+.
T Consensus 242 --~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 242 --IYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111111112233456678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-40 Score=309.62 Aligned_cols=241 Identities=25% Similarity=0.389 Sum_probs=196.1
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||.|+||.||++.+. .++.||+|++...... ..+.+.+|++++++++|+||+++++++.+....++||||++++
T Consensus 2 ~lg~g~~g~v~~~~~~----~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 2 KIGKGNFGDVYKGVLK----GNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred ccccCCCceEEEEEEe----CCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 5799999999999986 3677999998765443 3457999999999999999999999999999999999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC------cc
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------SY 229 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------~~ 229 (512)
+|.+++.. ....+++..++.++.+++.||.|||+++ ++||||||+|||++.++.+||+|||++....... ..
T Consensus 78 ~l~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 78 SLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 99999964 3456899999999999999999999998 9999999999999999999999999987654221 11
Q ss_pred ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
..+..|+|||.+.++.++.++|||||||++|||+| |..|+....... ....+........+...+..+.+++.+
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~ 230 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-----TRERIESGYRMPAPQLCPEEIYRLMLQ 230 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-----HHHHHhcCCCCCCCccCCHHHHHHHHH
Confidence 22456999999988889999999999999999999 665543321111 111111111222344556779999999
Q ss_pred hhccCCCCCCChHHHHHHhc
Q 010340 309 CLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 309 cl~~~p~~Rps~~~vl~~L~ 328 (512)
||..+|.+|||+.++++.|.
T Consensus 231 ~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 231 CWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HhccChhhCcCHHHHHHHhh
Confidence 99999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=322.10 Aligned_cols=248 Identities=21% Similarity=0.220 Sum_probs=203.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||.|+||.||+|.... +++.||+|.+...... ..+.+..|+++++.++||||+++++.+.+....++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 78 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKG---TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCL 78 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcC---CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEE
Confidence 35567888999999999999987 7889999999865433 23568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+.+++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 79 VMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999999997545567999999999999999999999999 999999999999999999999999987643211
Q ss_pred --------------------------------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH
Q 010340 227 --------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL 274 (512)
Q Consensus 227 --------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~ 274 (512)
....||..|+|||++.+..++.++||||||+++|+|++|..|+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 123578889999999988899999999999999999999988654321
Q ss_pred HHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCC----hHHHHHH
Q 010340 275 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN----TKDLVST 326 (512)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~~vl~~ 326 (512)
.. ....+.............+..+.+++.+||..||++||| +.+++.+
T Consensus 238 ~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 238 DE----TFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HH----HHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 11 111122111111111225677999999999999999999 7788775
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=337.00 Aligned_cols=252 Identities=18% Similarity=0.195 Sum_probs=190.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCC------CCccceEEEEeeC-C
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH------KRLANLIGYCCDG-D 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~-~ 143 (512)
.|.+++.||+|+||.||+|.+.. +++.||||+++.... ....+..|+.++..++| .+|+.+++++... .
T Consensus 130 ~y~i~~~lG~G~fg~V~~a~~~~---~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~ 205 (467)
T PTZ00284 130 RFKILSLLGEGTFGKVVEAWDRK---RKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG 205 (467)
T ss_pred cEEEEEEEEeccCEEEEEEEEcC---CCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence 46678889999999999999987 788999999964321 22345667777776654 4588999988764 5
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCC------------
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENG------------ 210 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~------------ 210 (512)
+.+||||++ +++|.+++. ..+.+++..+..|+.||+.||.|||+ .+ ||||||||+|||++.++
T Consensus 206 ~~~iv~~~~-g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 206 HMCIVMPKY-GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred eEEEEEecc-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccC
Confidence 789999998 778999886 34679999999999999999999998 47 99999999999998665
Q ss_pred ----CCeeecccCccccCC-CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH----H---h
Q 010340 211 ----DPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM----I---R 278 (512)
Q Consensus 211 ----~~kl~Dfg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~----~---~ 278 (512)
.+||+|||.+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... + .
T Consensus 282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~ 361 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL 361 (467)
T ss_pred CCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence 499999998765432 345678999999999999999999999999999999999998875321100 0 0
Q ss_pred cc------------chhhhcccc--cCCCCC---------------HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 279 GK------------NILHLMDSH--LEGNFS---------------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 279 ~~------------~~~~~~~~~--~~~~~~---------------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+. ....++... +..... ......+.+||.+||..||.+|||+.++++|-.-
T Consensus 362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441 (467)
T ss_pred CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence 00 000000000 000000 0113457799999999999999999999998554
Q ss_pred c
Q 010340 330 L 330 (512)
Q Consensus 330 ~ 330 (512)
.
T Consensus 442 ~ 442 (467)
T PTZ00284 442 L 442 (467)
T ss_pred c
Confidence 3
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=310.44 Aligned_cols=247 Identities=24% Similarity=0.365 Sum_probs=198.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.+.+.||.|+||.||++.+. ++..+|+|.+..... ....+.+|+++++.++||||+++++++......++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~----~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL----EKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe----CCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 35567888999999999999886 355699999875432 3467999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 79 EFMEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred EcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 99999999999864 3456899999999999999999999998 9999999999999999999999999987543221
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...++..|+|||.+.++.++.++||||||+++|||++ |..|+....... ....+........+...+..+.
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 231 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-----VVETINAGFRLYKPRLASQSVY 231 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-----HHHHHhCCCCCCCCCCCCHHHH
Confidence 2234568999999988889999999999999999998 776654321111 1111111111112223456788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+|+.+||+.+|++|||+.++++.|.
T Consensus 232 ~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 232 ELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHHcccChhhCCCHHHHHHhhC
Confidence 9999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-40 Score=316.48 Aligned_cols=255 Identities=21% Similarity=0.301 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+||.||+|..++ ....+..||+|.+...... ....+.+|+.+++.++||||+++++++......++
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV 86 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence 45578899999999999997653 1224568999998754322 13458889999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 148 VAEYMPNDTLAKHLFHWE--------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~ 165 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGM 165 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCc
Confidence 999999999999996422 134567788999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCC
Q 010340 220 MKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 220 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
++..... ....++..|+|||.+.++.++.++|||||||++|||++ |..|+....... ....+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-----~~~~~~~~~~~ 240 (288)
T cd05061 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-----VLKFVMDGGYL 240 (288)
T ss_pred cccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCC
Confidence 8754321 12234667999999988889999999999999999999 565543221111 11111111111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
..+...+..+.+++.+||+.||++|||+.++++.|....
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 241 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 223344577999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=310.25 Aligned_cols=249 Identities=17% Similarity=0.229 Sum_probs=187.2
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
+||+|+||.||++...... ....+++|.+..... ...+.+.+|+.+++.++||||+++++.|......++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDT-GVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCC-CcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 5799999999999865432 344577887765432 23467999999999999999999999999999999999999999
Q ss_pred CHHhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC------CCC
Q 010340 156 TLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR------DGK 227 (512)
Q Consensus 156 ~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~------~~~ 227 (512)
+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 159 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED 159 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence 9999997432 234677788899999999999999998 9999999999999999999999999876422 122
Q ss_pred ccccCcccCCcccccC-------CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-HhccchhhhcccccCCCCCHHHH
Q 010340 228 SYSTNLAYTPPEYLRN-------GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-IRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
...++..|+|||++.. ..++.++|||||||++|||+++..+++....+. ...............+......+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS 239 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCc
Confidence 3457889999999743 235789999999999999998654443221110 00000000000011122223345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+.+++..|| .+|++||++.+|++.|.
T Consensus 240 ~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 240 ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 66788999999 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=316.26 Aligned_cols=250 Identities=18% Similarity=0.244 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..+.+++.||.|+||.||++.+.. +++.||+|.+........+.+.+|++++++++||||+++++++..+...++||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKE---TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcC---CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 346688899999999999999876 77889999997654444567899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (280)
T cd06611 82 EFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK 159 (280)
T ss_pred eccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence 99999999999864 3457999999999999999999999999 999999999999999999999999987654322
Q ss_pred -CccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc-cCCCCCHHHH
Q 010340 227 -KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH-LEGNFSSEEA 299 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 299 (512)
....+++.|++||++. +..++.++|||||||++|+|++|+.|+....... ....+.... .....+...+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 235 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR----VLLKILKSEPPTLDQPSKWS 235 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH----HHHHHhcCCCCCcCCcccCC
Confidence 2346788999999975 3447789999999999999999997764321110 011111100 0111233455
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..+.+++.+||..+|.+||++.+++++-.
T Consensus 236 ~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 236 SSFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 67889999999999999999999998743
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=313.78 Aligned_cols=246 Identities=23% Similarity=0.335 Sum_probs=197.0
Q ss_pred cCCCCCCCeEEEEEEcCCC---CCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 77 ESGEKAPNVVYKGRLQDGN---DNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
.||.|+||.||+|...... ..++.+|||.+..... .....+.+|+.+++.++||||+++++++......++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 4799999999999886421 1346799999875432 23467899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-----CCeeecccCccc
Q 010340 153 PNDTLAKHLFHW-----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-----DPRLSCFGLMKN 222 (512)
Q Consensus 153 ~~g~L~~~l~~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-----~~kl~Dfg~a~~ 222 (512)
++++|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++ .++|+|||+++.
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999999643 2234789999999999999999999998 99999999999999877 899999999875
Q ss_pred cCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 223 SRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 223 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
..... ...++..|+|||++.++.++.++|||||||++|||+| |..|+....... ....+........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-----VLQHVTAGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-----HHHHHhcCCccCCc
Confidence 43221 2234678999999998899999999999999999998 887664321111 11111111122334
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456678899999999999999999999999885
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=314.09 Aligned_cols=255 Identities=20% Similarity=0.274 Sum_probs=203.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+++.||+|+||.||+|.+..... ....||+|.+...... ....+.+|+.++..++||||+++++++.. ...++|
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v 86 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI 86 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence 35577889999999999999865221 2346999998765432 23578899999999999999999999987 788999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 228 (512)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.......
T Consensus 87 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 87 TQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred EecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 999999999999964 3446899999999999999999999998 99999999999999999999999999876543221
Q ss_pred ------cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 229 ------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 229 ------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
..++..|+|||.+....++.++|||||||++||+++ |+.|+....... +...+........+..++..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-----IPDLLEKGERLPQPPICTID 239 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHhCCCCCCCCCCCCHH
Confidence 112467999999988889999999999999999998 887754322111 11111111112223345567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+.+++.+||..+|.+||++.++++.|..+.+.
T Consensus 240 ~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 240 VYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 88999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=316.67 Aligned_cols=250 Identities=22% Similarity=0.253 Sum_probs=195.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+++.||.|+||.||+|.... +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKK---TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred ceEeeEecccCceEEEEEEECC---CCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence 4567889999999999999876 7888999998754322 2357889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 150 EYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
||++ ++|.+++.... ...+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 9997 58988886433 367899999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc--------------------chh
Q 010340 227 --KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK--------------------NIL 283 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------------------~~~ 283 (512)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.|+........... ...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 233567889999998654 478899999999999999999977653211000000 000
Q ss_pred hhcccccCC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 284 HLMDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 284 ~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
......... ......++++.++|.+||..||.+|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000 0011245667899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=309.98 Aligned_cols=246 Identities=16% Similarity=0.218 Sum_probs=203.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|.+++.||.|+||.||++.... +++.||+|.+...... ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKE---DGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcC---CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEE
Confidence 4567889999999999999887 7788999998754322 2357899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence 9999999999997544556899999999999999999999998 9999999999999999999999999987654322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
...+++.|+|||++.+..++.++|||||||++++|++|+.|+........ ...+.. ......+...+..+.++
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~l 232 (256)
T cd08218 158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL----VLKIIR-GSYPPVSSHYSYDLRNL 232 (256)
T ss_pred hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH----HHHHhc-CCCCCCcccCCHHHHHH
Confidence 34578889999999888899999999999999999999987653311111 111111 11122344556778999
Q ss_pred HHHhhccCCCCCCChHHHHHH
Q 010340 306 ASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~ 326 (512)
|.+||+.+|.+||++.+++++
T Consensus 233 i~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 233 VSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHhhCChhhCcCHHHHhhC
Confidence 999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=326.46 Aligned_cols=252 Identities=19% Similarity=0.239 Sum_probs=196.0
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeC----
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG---- 142 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---- 142 (512)
...|.+++.||.|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTR---LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECC---CCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 3456688899999999999999877 7788999998754322 235678899999999999999999988543
Q ss_pred --CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCc
Q 010340 143 --DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (512)
Q Consensus 143 --~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a 220 (512)
...+++||++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccc
Confidence 3478999998 779988884 457999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC-CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-H------hccchhhhccccc-
Q 010340 221 KNSRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-I------RGKNILHLMDSHL- 290 (512)
Q Consensus 221 ~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-~------~~~~~~~~~~~~~- 290 (512)
+..... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... . .+...........
T Consensus 166 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07878 166 RQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISS 245 (343)
T ss_pred eecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcch
Confidence 865443 34578999999999977 468999999999999999999998775421100 0 0000000000000
Q ss_pred ---------CCCCC--------HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 291 ---------EGNFS--------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 291 ---------~~~~~--------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....+ ....+.+.+|+.+||..||.+|||+.+++++-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 246 EHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred hhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00000 112345789999999999999999999998743
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=309.36 Aligned_cols=247 Identities=20% Similarity=0.298 Sum_probs=199.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+.+.+.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+.+++.++|+||+++++++.. ...+++||
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~----~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ceeEEeEecCccceEEEEEEec----CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 4557788999999999999865 34559999887543 234678999999999999999999999987 77899999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 159 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 159 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence 999999999997655567899999999999999999999998 9999999999999999999999999987544322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...++..|+|||++.+..++.++|+|||||++|+++| |..|+........ ...+........+...+..+.+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-----IRALERGYRMPRPENCPEELYN 234 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHhCCCCCCCcccCCHHHHH
Confidence 1234567999999988889999999999999999999 7766543211111 1111111111223445567889
Q ss_pred HHHHhhccCCCCCCChHHHHHHhcc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++.+||+.+|++||++.++++.|+.
T Consensus 235 ~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 235 IMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-40 Score=318.52 Aligned_cols=255 Identities=20% Similarity=0.303 Sum_probs=200.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
.+..|.+++.||.|+||.||+|.+.. +++.||+|.+...... ....+.+|+.+++.++||||+++++++......+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 80 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKL---TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLT 80 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcC---CCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEE
Confidence 34567889999999999999999886 7788999998754332 2356889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++......
T Consensus 81 lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 81 LVFEYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred EEEeccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9999997 589888864 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------c----cchhhhcc---
Q 010340 227 ----KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------G----KNILHLMD--- 287 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~----~~~~~~~~--- 287 (512)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||......... . ..+..+..
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 233568899999998654 4788999999999999999999876543111000 0 00000000
Q ss_pred ------cccCC----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 288 ------SHLEG----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 288 ------~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.... ......+..+.+||.+||..||.+|||+.+++++-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00000 011224556889999999999999999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-40 Score=315.91 Aligned_cols=252 Identities=20% Similarity=0.230 Sum_probs=202.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
++.+++.||+|+||.||++.+.. +++.||+|.+...... ....+.+|+.++++++||||+++++.+...+..++||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRP---TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 45688899999999999999986 7888999998754221 1357889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 150 EYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||+++++|..++.... ...+++..+..++.|++.||.|||+. + ++|+||||+||+++.++.+||+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 9999999999886421 24789999999999999999999974 6 99999999999999999999999999876432
Q ss_pred CCccccCcccCCcccccCCC------CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 226 GKSYSTNLAYTPPEYLRNGR------VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 226 ~~~~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
.....++..|+|||.+.+.. ++.++|||||||++|+|++|+.||......... .....+.. ......+...+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~ 235 (286)
T cd06622 158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIVD-GDPPTLPSGYS 235 (286)
T ss_pred cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHhh-cCCCCCCcccC
Confidence 23345788999999985543 588999999999999999999886543211110 11111111 12233455577
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..+.+++.+||..+|++||++.+++.+-.
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 236 DDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 88999999999999999999999998754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=318.14 Aligned_cols=254 Identities=21% Similarity=0.306 Sum_probs=199.4
Q ss_pred cccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+++.||+|+||.||+|.+..+.. ....||+|.+....... ...+.+|+.+++.++||||++++++|... ..++++|
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e 88 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQ 88 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeeh
Confidence 466788999999999999865221 12368999987654322 23688999999999999999999999754 4679999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++|+|.+++.. ....+++..++.++.|++.||.|||+++ ++|+||||+|||++.++.+||+|||+++......
T Consensus 89 ~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 166 (303)
T cd05110 89 LMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 166 (303)
T ss_pred hcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCccccc
Confidence 9999999999864 3446899999999999999999999998 9999999999999999999999999987644321
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...++..|++||++.+..++.++|||||||++|||++ |+.|+....... ...++........+..++..+.
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd05110 167 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-----IPDLLEKGERLPQPPICTIDVY 241 (303)
T ss_pred ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCHHHH
Confidence 2234678999999988889999999999999999997 776654321111 1111111111122333456788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
+++..||..+|++||++.++++.|..+...+
T Consensus 242 ~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 242 MVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 9999999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=313.08 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=201.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+.+.||.|+||.||+|.+.........||||....... ...+.+.+|+.+++.++||||+++++++.+ +..++|||
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e 86 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVME 86 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEE
Confidence 4466788999999999999865422445699999876542 224579999999999999999999999875 45789999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||+++......
T Consensus 87 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 87 LAPLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred cCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeeccccccee
Confidence 9999999999964 2346899999999999999999999998 9999999999999999999999999987654322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...++..|+|||.+.+..++.++|||||||++|||++ |..||........ ...+........+..++..+.+
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 239 (270)
T cd05056 165 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTLYS 239 (270)
T ss_pred cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-----HHHHHcCCcCCCCCCCCHHHHH
Confidence 1223467999999988889999999999999999986 8877643321111 0001111111234455677999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
++.+||..+|.+|||+.+++..|..+.+
T Consensus 240 li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 240 LMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=310.12 Aligned_cols=251 Identities=20% Similarity=0.285 Sum_probs=201.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
++.+++.||.|+||+||+|.... ++..+|+|++...... ....+.+|+++++.++|+||+++++.+......++||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLP---NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcC---CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 34577888999999999999876 6788999998754432 3567999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 150 EYMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|++++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999999975333 57899999999999999999999999 9999999999999999999999999986544322
Q ss_pred -------ccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCC-CHHH
Q 010340 228 -------SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF-SSEE 298 (512)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 298 (512)
...++..|++||++... .++.++|+|||||++|+|++|+.|+............ ............ ....
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLT-LQNDPPSLETGADYKKY 236 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHH-hcCCCCCcCCccccccc
Confidence 23578899999999776 6899999999999999999999876432111000000 000000111110 1245
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+..+.+++.+||..||++|||+.+++++
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 237 SKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 6778899999999999999999999886
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=315.05 Aligned_cols=257 Identities=18% Similarity=0.230 Sum_probs=201.2
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceE
Q 010340 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLI 136 (512)
Q Consensus 58 ~~~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 136 (512)
++.++....+. +.++..||.|+||.||+|.+.. +++.||+|++.... .....+..|+.++.++ +|+||++++
T Consensus 7 ~~~~~~~~~~~---~~~~~~lg~g~~~~v~~~~~~~---~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~ 79 (282)
T cd06636 7 DLSALRDPAGI---FELVEVVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYY 79 (282)
T ss_pred hhhhhcChhhh---hhhheeeccCCCeEEEEEEEcC---CCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 33444334443 4466788999999999999987 77889999986543 2335688999999999 799999999
Q ss_pred EEEee------CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC
Q 010340 137 GYCCD------GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (512)
Q Consensus 137 ~~~~~------~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 210 (512)
+++.. ....++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++
T Consensus 80 ~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~ 158 (282)
T cd06636 80 GAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENA 158 (282)
T ss_pred eehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCC
Confidence 99853 457899999999999999997655667899999999999999999999999 99999999999999999
Q ss_pred CCeeecccCccccCC----CCccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc
Q 010340 211 DPRLSCFGLMKNSRD----GKSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN 281 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~----~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~ 281 (512)
.++|+|||++..... .....+++.|+|||++. +..++.++|||||||++|||++|..||..... . ..
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~-~---~~ 234 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP-M---RA 234 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH-H---hh
Confidence 999999999875432 23456788999999985 34588899999999999999999977643211 0 11
Q ss_pred hhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 282 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.................+..+.+||.+||..||.+|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 235 LFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred hhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 111111111111123456678999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=308.51 Aligned_cols=246 Identities=20% Similarity=0.231 Sum_probs=202.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|.+++.||+|+||.||++.... +++.+|||.+....... ...+.+|+.+++.++||||+++++.+...+..++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKA---DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred ceEEEEecccCceEEEEEEEcC---CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence 4567888999999999999887 78889999987654322 457899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-CCCeeecccCccccCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~-- 226 (512)
||+++++|.+++.......+++..+..++.+++.||.|||+++ ++|+||||+||+++.+ +.+||+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 9999999999997644566899999999999999999999998 9999999999999855 46899999998765432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....++..|+|||.+.+..++.++||||||+++|+|++|+.|+........ ...... ......+...+..+.++
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~l~~l 232 (256)
T cd08220 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL----VLKIMS-GTFAPISDRYSPDLRQL 232 (256)
T ss_pred ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH----HHHHHh-cCCCCCCCCcCHHHHHH
Confidence 234678899999999888899999999999999999999987643211111 111111 11122334456678899
Q ss_pred HHHhhccCCCCCCChHHHHHH
Q 010340 306 ASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.+||..+|.+|||+.+++++
T Consensus 233 i~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 233 ILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHHHccCChhhCCCHHHHhhC
Confidence 999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=308.82 Aligned_cols=245 Identities=18% Similarity=0.226 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+.+.||.|+||.||+|.... +++.|++|.+..... .+.+.+|+++++.++||||+++++++......+++||
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKE---TGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcC---CCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 34467778999999999999986 678899999876532 5789999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (256)
T cd06612 79 YCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR 156 (256)
T ss_pred cCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence 9999999999864 3567899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc-ccCCCCCHHHHHHHHHH
Q 010340 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS-HLEGNFSSEEATVVFDL 305 (512)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 305 (512)
...++..|+|||++.+..++.++|||||||++|+|++|+.|+....... ........ ......+...+..+.++
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR----AIFMIPNKPPPTLSDPEKWSPEFNDF 232 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh----hhhhhccCCCCCCCchhhcCHHHHHH
Confidence 3457889999999988889999999999999999999998765321110 00010000 00111233455678999
Q ss_pred HHHhhccCCCCCCChHHHHHH
Q 010340 306 ASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.+||+.||.+|||+.+++++
T Consensus 233 i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 233 VKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred HHHHHhcChhhCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=309.84 Aligned_cols=243 Identities=19% Similarity=0.239 Sum_probs=195.5
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-----hhHHHHHHHHHhcCCCCCccceEEEEee--CCee
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----PKQFADEAWGVGKLRHKRLANLIGYCCD--GDER 145 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 145 (512)
.+.+.||+|+||.||++.+.. +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+ ....
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVD---TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred cccceecCCCCEEEEEEEEcC---CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 356677999999999999887 78889999987543211 2468889999999999999999999875 3568
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+++|||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 89999999999999996 3456899999999999999999999998 99999999999999999999999999875432
Q ss_pred C-------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 226 G-------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 226 ~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
. ....++..|+|||++.+..++.++|||||||++|||++|+.||..... ...+...........++...
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~ 234 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPTNPQLPSHI 234 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHHHhcCCCCCCCchhc
Confidence 1 124578899999999888899999999999999999999987643211 11111121122233445556
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
++.+.+++ +||..+|++||++.++++|
T Consensus 235 ~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 235 SEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 66777888 6888899999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=316.89 Aligned_cols=246 Identities=20% Similarity=0.251 Sum_probs=195.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
+.|.+++.||+||.+.||++... +...||+|++...... ...-|.+|+.+|.+| .|.+||+|++|-..++.+|
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s----~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNS----DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecC----CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 56789999999999999999876 3455788877654332 245799999999999 6999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
|||||-+- +|..+|+........| .++.+..|++.++.++|..| |||.||||.|+|+- .|.+||+|||+|.....+
T Consensus 437 mvmE~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 437 MVMECGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred EEeecccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 99999854 9999997644444445 77889999999999999999 99999999999986 578999999999987665
Q ss_pred C------ccccCcccCCcccccCC-----------CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc
Q 010340 227 K------SYSTNLAYTPPEYLRNG-----------RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH 289 (512)
Q Consensus 227 ~------~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
+ +.+||+.||+||.+... ++++++||||||||||+|+.|+.||-.. ... ...+..+.++.
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-~n~--~aKl~aI~~P~ 589 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-INQ--IAKLHAITDPN 589 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-HHH--HHHHHhhcCCC
Confidence 4 45799999999998422 2678999999999999999999765322 111 12334444544
Q ss_pred cCCCCCHHHHH-HHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 290 LEGNFSSEEAT-VVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 290 ~~~~~~~~~~~-~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..-+++.-... ++.++++.||+.||.+|||+.++|++
T Consensus 590 ~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 590 HEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 43344322222 28899999999999999999999987
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=311.53 Aligned_cols=249 Identities=21% Similarity=0.257 Sum_probs=197.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--C--------hhHHHHHHHHHhcCCCCCccceEEEEee
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--D--------PKQFADEAWGVGKLRHKRLANLIGYCCD 141 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~ 141 (512)
+.+.+.||.|+||.||+|.... +++.||||.+...... . .+.+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 79 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVT---TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT 79 (272)
T ss_pred eeecceecccCceEEEEEeecC---CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc
Confidence 3456678999999999999876 7788999988642211 0 1357889999999999999999999999
Q ss_pred CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.+..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccc
Confidence 9999999999999999999974 367899999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCC------CccccCcccCCcccccCCC--CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 222 NSRDG------KSYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 222 ~~~~~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
..... ....++..|+|||.+.... ++.++||||||+++|++++|..|+........................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPD 236 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcc
Confidence 54321 2345788999999987654 889999999999999999999876432111000000000001111112
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.....+..+.+++.+||..+|.+|||+.+++++
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 237 VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 223446778999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=310.29 Aligned_cols=244 Identities=19% Similarity=0.203 Sum_probs=196.9
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--C---hhHHHHHHHHHhcCCCCCccceEEEEeeC--Ce
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--D---PKQFADEAWGVGKLRHKRLANLIGYCCDG--DE 144 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 144 (512)
+.+...||+|+||.||++.+.. +++.||||.+...... . .+.+.+|+.++++++||||+++++++.+. ..
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDAD---TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERT 80 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcC---CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCce
Confidence 4456778999999999999887 7889999998643211 1 24688899999999999999999998763 46
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
+++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 7899999999999999863 356889999999999999999999999 9999999999999999999999999887543
Q ss_pred C-------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 225 D-------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 225 ~-------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
. .....++..|+|||++.+..++.++|||||||++|+|++|+.|+...... ...............+..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~ 233 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPTNPVLPPH 233 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHHHhcCCCCCCCchh
Confidence 2 22345788999999998888999999999999999999999876432111 111111111223344566
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+..+.+++.+||. +|++||++++++++
T Consensus 234 ~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 234 VSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred hCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 67778899999995 99999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=317.66 Aligned_cols=248 Identities=27% Similarity=0.376 Sum_probs=199.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChh--HHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK--QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|++++.||+|+||.||++.... +++.||+|++......... ...+|+.++++++||||+++++++.+....++||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~ 77 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKK---NGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVM 77 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETT---TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECC---CCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccc
Confidence 4577889999999999999998 7889999999876532221 3456999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc----CC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS----RD 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~----~~ 225 (512)
||+++++|.+++. ....+++..++.++.||+.||.+||+.+ ++|+||||+||+++.++.++|+|||.+... ..
T Consensus 78 ~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~ 154 (260)
T PF00069_consen 78 EYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN 154 (260)
T ss_dssp EEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 9999999999996 4577899999999999999999999998 999999999999999999999999998752 12
Q ss_pred CCccccCcccCCccccc-CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC--CCCHHHHHHH
Q 010340 226 GKSYSTNLAYTPPEYLR-NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG--NFSSEEATVV 302 (512)
Q Consensus 226 ~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 302 (512)
.....++..|+|||++. +..++.++||||||+++|+|++|..|+........ .............. .........+
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ-LEIIEKILKRPLPSSSQQSREKSEEL 233 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH-HHHHHHHHHTHHHHHTTSHTTSHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhh-hhhhhhcccccccccccccchhHHHH
Confidence 23456789999999998 78899999999999999999999987664310000 00000000000000 0011113678
Q ss_pred HHHHHHhhccCCCCCCChHHHHHH
Q 010340 303 FDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+++.+||+.||++|||+.+++++
T Consensus 234 ~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 234 RDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999999876
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=314.47 Aligned_cols=247 Identities=19% Similarity=0.219 Sum_probs=200.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.++..||.|+||.||+|.... +++.||+|++....... ...+.+|+++++.++||||++++++|.+....++|
T Consensus 17 y~~~~~lg~g~~g~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 17 FTDLREIGHGSFGAVYFARDVR---TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhheeecCCCCeEEEEEEEcC---CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 4567788999999999999876 77889999987543322 24688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 228 (512)
|||++| +|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 94 ~e~~~g-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~ 170 (307)
T cd06607 94 MEYCLG-SASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS 170 (307)
T ss_pred HHhhCC-CHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence 999974 77777753 3456899999999999999999999999 99999999999999999999999999987766666
Q ss_pred cccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 229 ~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
..+++.|+|||++. ...++.++||||||+++|||+||+.|+........ ...+.........+...+..+.++
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 246 (307)
T cd06607 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNDSPTLSSNDWSDYFRNF 246 (307)
T ss_pred ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH----HHHHhcCCCCCCCchhhCHHHHHH
Confidence 77889999999984 35688999999999999999999977653211110 001111111111123456678999
Q ss_pred HHHhhccCCCCCCChHHHHHHhc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+||..+|++||++.+++.+..
T Consensus 247 i~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 247 VDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred HHHHhcCChhhCcCHHHHhcChh
Confidence 99999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=312.84 Aligned_cols=255 Identities=18% Similarity=0.249 Sum_probs=201.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC-CCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEee-CCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l 147 (512)
.+.+.+.||+|+||.||+|.+.... ..+..|++|++...... ..+.+.+|+.+++.++||||+++++++.. +...++
T Consensus 7 ~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 86 (280)
T cd05043 7 RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFV 86 (280)
T ss_pred heEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEE
Confidence 3446677899999999999987521 13678999998754322 23568899999999999999999999876 567899
Q ss_pred EEEccCCCCHHhhhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 148 VAEYMPNDTLAKHLFHWEN------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
++||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++
T Consensus 87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~ 165 (280)
T cd05043 87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSR 165 (280)
T ss_pred EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCcc
Confidence 9999999999999864322 46899999999999999999999998 9999999999999999999999999997
Q ss_pred ccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCC
Q 010340 222 NSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNF 294 (512)
Q Consensus 222 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (512)
...... ...++..|+|||++.+..++.++|||||||++||+++ |+.|+...... .+...+........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~ 240 (280)
T cd05043 166 DLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-----EMAAYLKDGYRLAQ 240 (280)
T ss_pred cccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHcCCCCCC
Confidence 653321 2334667999999988889999999999999999999 88765432111 11111111122222
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+..+++.+.+++.+||..+|++|||+.++++.|..+.
T Consensus 241 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 241 PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 3345667899999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=314.35 Aligned_cols=244 Identities=21% Similarity=0.243 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.|.+++.||+|+||.||++.+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.++...++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKG---SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYL 78 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEE
Confidence 45678889999999999999987 7888999998754322 23568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+|||++.++.+||+|||++......
T Consensus 79 v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 79 VMEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCC
Confidence 9999999999999973 467999999999999999999999999 999999999999999999999999998765443
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
....+++.|+|||.+.+...+.++||||||+++|+|++|+.|+........ ...+.. ....++...+..+.+++
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~--~~~~~~~~~~~~l~~li 229 (290)
T cd05580 156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI----YEKILE--GKVRFPSFFSPDAKDLI 229 (290)
T ss_pred CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhc--CCccCCccCCHHHHHHH
Confidence 344678999999999888889999999999999999999987653321110 111111 11223444567788999
Q ss_pred HHhhccCCCCCC-----ChHHHHHH
Q 010340 307 SRCLQYEPRERP-----NTKDLVST 326 (512)
Q Consensus 307 ~~cl~~~p~~Rp-----s~~~vl~~ 326 (512)
.+||..||.+|+ ++++++++
T Consensus 230 ~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 230 RNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred HHHccCCHHHccCcccCCHHHHHcC
Confidence 999999999998 77777766
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=314.40 Aligned_cols=250 Identities=21% Similarity=0.283 Sum_probs=197.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.+.+++.||+|+||.||+|.+.. +++.||+|++...... ..+.+.+|+.+++.++||||+++++++......++|
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRE---TGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECC---CCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEE
Confidence 35577889999999999999986 7888999998754322 235688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++++|..++. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 79 FEYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EeccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99999988888775 3456899999999999999999999999 9999999999999999999999999987654432
Q ss_pred ---ccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH--Hhc-cchhh-------h--------
Q 010340 228 ---SYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM--IRG-KNILH-------L-------- 285 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~--~~~-~~~~~-------~-------- 285 (512)
...++..|+|||++.+ ..++.++|||||||++|+|++|+.||....... ... ..... .
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence 3456789999999876 457899999999999999999997765321110 000 00000 0
Q ss_pred --cccccCCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 286 --MDSHLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 286 --~~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..+...... ....+..+.+|+.+||+.+|++||++.+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000000 01235668899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=310.12 Aligned_cols=244 Identities=19% Similarity=0.243 Sum_probs=197.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC------hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD------PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+.+.+.||.|+||.||+|... +++.+|||.+....... ...+.+|+++++.++|+||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 77 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTN----QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTI 77 (265)
T ss_pred ccccceEeccCCeEEEEEEEc----CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeE
Confidence 345677899999999999864 56779999987543211 24588999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 78 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 78 SIFMEFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999999996 3456899999999999999999999999 99999999999999999999999998865321
Q ss_pred ----------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc-ccCCCC
Q 010340 226 ----------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS-HLEGNF 294 (512)
Q Consensus 226 ----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 294 (512)
.....++..|+|||++.+..++.++|||||||++|+|++|..||....... ........ ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~ 230 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA----AMFYIGAHRGLMPRL 230 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH----HHHHhhhccCCCCCC
Confidence 123457889999999988889999999999999999999998764321100 00011000 112233
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+...+..+.+++.+||..+|.+||++.+++.+
T Consensus 231 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 231 PDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 44566778899999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=307.40 Aligned_cols=248 Identities=27% Similarity=0.415 Sum_probs=199.8
Q ss_pred ccccCCCCCCCeEEEEEEcCCC-CCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+++.||.|+||.||++.+.... ..+..||+|++...... ..+.+..|+.++..++|+||+++++++.+.+..++||||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 5678899999999999997621 12488999999766543 356899999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc---
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS--- 228 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--- 228 (512)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK 161 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceeccccccccc
Confidence 99999999997533333999999999999999999999999 99999999999999999999999999876543311
Q ss_pred --cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 229 --YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 229 --~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
..+++.|+|||.+.+..++.++||||||+++++|++ |..|+...... ..............+...+..+.++
T Consensus 162 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (258)
T smart00219 162 KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE-----EVLEYLKKGYRLPKPENCPPEIYKL 236 (258)
T ss_pred ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhcCCCCCCCCcCCHHHHHH
Confidence 225678999999988889999999999999999999 55544321111 1111111111222334466778999
Q ss_pred HHHhhccCCCCCCChHHHHHHh
Q 010340 306 ASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L 327 (512)
+.+||..+|++|||+.++++.|
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 237 MLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999998864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=311.62 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.++..||.|+||.||+|..+... ...+.|++|.+...... ..+.+.+|++++++++|+||+++++++.+....++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM 85 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence 4457788999999999999976432 14567999998765433 23579999999999999999999999999899999
Q ss_pred EEEccCCCCHHhhhhhcCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCc
Q 010340 148 VAEYMPNDTLAKHLFHWEN-------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~-------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a 220 (512)
||||+++|+|.+++..... ..+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||++
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccc
Confidence 9999999999999974331 26899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCC-----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCC
Q 010340 221 KNSRDG-----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNF 294 (512)
Q Consensus 221 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (512)
...... ....++..|+|||.+.+..++.++||||||+++|+|++ |..|+........ .............
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~----~~~~~~~~~~~~~ 240 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEV----LNRLQAGKLELPV 240 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHH----HHHHHcCCcCCCC
Confidence 643221 22345677999999988888999999999999999999 5545432111111 1111111111122
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+...+..+.+++.+||+.+|.+|||+.+++..|.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 3345567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=314.86 Aligned_cols=249 Identities=18% Similarity=0.239 Sum_probs=203.0
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.++.||+|+||.||++.+.. ++..||+|++....... ...+.+|+++++.++||||+++++++.+....++|||
T Consensus 29 ~~~~lg~G~~~~v~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 29 DLREIGHGSFGAVYFARDVR---TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhheeccCCCeEEEEEEEcC---CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 56778999999999999877 77889999987543322 2468899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCccc
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS 230 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 230 (512)
|++| +|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 106 ~~~g-~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (317)
T cd06635 106 YCLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFV 182 (317)
T ss_pred CCCC-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCccccc
Confidence 9975 78777753 3566899999999999999999999999 9999999999999999999999999988766666677
Q ss_pred cCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 231 TNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 231 ~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
+++.|+|||++. ++.++.++|||||||++|+|++|+.|+....... ....+.............+..+.+++.
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~ 258 (317)
T cd06635 183 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQNESPTLQSNEWSDYFRNFVD 258 (317)
T ss_pred CCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHHhccCCCCCCccccHHHHHHHH
Confidence 899999999974 4568999999999999999999998765421110 011111111111222345567889999
Q ss_pred HhhccCCCCCCChHHHHHHhccccC
Q 010340 308 RCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
+||+.+|.+||++.++++++.....
T Consensus 259 ~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 259 SCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred HHccCCcccCcCHHHHHhChhhhcc
Confidence 9999999999999999998876553
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=341.54 Aligned_cols=249 Identities=20% Similarity=0.165 Sum_probs=208.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
-.++.|++.||+|+||.|..++.+. +++.||+|++++.. ..+...|..|-++|..-+.+.|+.++-.|.++.++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~---t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKS---TEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeec---cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 3556789999999999999999998 89999999998732 23345799999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
||||||++||+|-.++.+ -..+++..++.++..|.-||.-||+.| +|||||||+|||||..|++||+|||.+-....
T Consensus 151 YlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred EEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence 999999999999999964 237999999999999999999999999 99999999999999999999999998766553
Q ss_pred C-----CccccCcccCCccccc----C-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 226 G-----KSYSTNLAYTPPEYLR----N-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 226 ~-----~~~~~t~~y~aPE~~~----~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
. ...+|||.|++||++. + +.|+..+|+||+||++|||+.|..||+.+..-. ....+++..-.-.+|
T Consensus 228 dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslve----TY~KIm~hk~~l~FP 303 (1317)
T KOG0612|consen 228 DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVE----TYGKIMNHKESLSFP 303 (1317)
T ss_pred CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHH----HHHHHhchhhhcCCC
Confidence 3 2457999999999984 2 569999999999999999999999988763322 222333322222334
Q ss_pred --HHHHHHHHHHHHHhhccCCCCCCC---hHHHHHHhc
Q 010340 296 --SEEATVVFDLASRCLQYEPRERPN---TKDLVSTLA 328 (512)
Q Consensus 296 --~~~~~~~~~li~~cl~~~p~~Rps---~~~vl~~L~ 328 (512)
..+++.+.+||++.+. +|+.|.. +.++..|..
T Consensus 304 ~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpF 340 (1317)
T KOG0612|consen 304 DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPF 340 (1317)
T ss_pred cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence 4578889999999775 7888987 888888753
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=315.94 Aligned_cols=249 Identities=20% Similarity=0.132 Sum_probs=198.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+||.||++.... +++.||+|.+...... ....+.+|+.+++.++||||+++++.+..++..++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l 78 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKE---TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCM 78 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECC---CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEE
Confidence 34577889999999999999987 7888999998765422 23468899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||||++|++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++....
T Consensus 79 v~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 79 VMEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred EEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999999963 457899999999999999999999998 99999999999999999999999998763110
Q ss_pred -----------------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc
Q 010340 226 -----------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 226 -----------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
.....++..|+|||.+.+..++.++|+|||||++|||++|..|+.................
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~-- 233 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI-- 233 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc--
Confidence 0123467889999999888899999999999999999999988764322211111100000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.........+..+.+++.+||+.+|++||++.++.+.|+
T Consensus 234 -~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 234 -EWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred -CCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 001111235566889999999999999999655554443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=317.81 Aligned_cols=246 Identities=17% Similarity=0.247 Sum_probs=185.4
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee--CCeeEEEEEccC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLLVAEYMP 153 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~ 153 (512)
.+||+|+||.||+|....+. +++.||+|.+.... ....+.+|+.+++.++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~-~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGK-DEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCC-ccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 46899999999999976533 56789999987543 23468899999999999999999999854 567899999996
Q ss_pred CCCHHhhhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee----cCCCCCeeecccCccc
Q 010340 154 NDTLAKHLFHW-------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMKN 222 (512)
Q Consensus 154 ~g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfg~a~~ 222 (512)
+ +|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++.
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 5 788777421 2235889999999999999999999999 9999999999999 5667899999999976
Q ss_pred cCCC-------CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc---------------
Q 010340 223 SRDG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG--------------- 279 (512)
Q Consensus 223 ~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~--------------- 279 (512)
.... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||.....+....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 5332 234678999999999764 47999999999999999999997764321110000
Q ss_pred -----cchhhh---------cccccCC------------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 280 -----KNILHL---------MDSHLEG------------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 280 -----~~~~~~---------~~~~~~~------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..+..+ ....... .........+.+|+.+||..||.+|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 000000 0000000 0001123457789999999999999999999976
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=316.51 Aligned_cols=250 Identities=20% Similarity=0.233 Sum_probs=196.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|.+++.||.|+||.||+|.+.. +++.||+|.+....... ...+.+|+.+++.++||||+++++++.+....++|+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~---~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred ceeEEEecccCCeEEEEEEECC---CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEE
Confidence 4567788999999999999987 78889999987543221 346788999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.....
T Consensus 79 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 155 (284)
T cd07839 79 EYCDQ-DLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC 155 (284)
T ss_pred ecCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence 99975 88888754 3456999999999999999999999999 999999999999999999999999998764332
Q ss_pred -CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc---------------hhhhcccc
Q 010340 227 -KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN---------------ILHLMDSH 289 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~---------------~~~~~~~~ 289 (512)
....++..|+|||++.+.. ++.++|||||||++|+|+||+.|++........... ........
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK 235 (284)
T ss_pred cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccc
Confidence 2345678999999987654 789999999999999999999875432110000000 00000000
Q ss_pred cCC---------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 290 LEG---------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 290 ~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
... ...+..+..+.+++.+||+.||.+|||+.+++.+-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 000 01123456788999999999999999999998763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=308.53 Aligned_cols=251 Identities=16% Similarity=0.181 Sum_probs=196.9
Q ss_pred HHHHHHhcCCCccccccc--CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceE
Q 010340 60 ADLRAATNNFSSDFIVSE--SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLI 136 (512)
Q Consensus 60 ~~~~~~~~~f~~~~~i~~--lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 136 (512)
.++....++|. +++. +|.|+||.||++..+. ++..+|+|.+........ |+.....+ +||||++++
T Consensus 7 ~~~~~~~~~~~---~~~~~~lg~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~ 75 (267)
T PHA03390 7 SELVQFLKNCE---IVKKLKLIDGKFGKVSVLKHKP---TQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLY 75 (267)
T ss_pred HHHHHHHHhhc---cccceeecCCCceEEEEEEEcC---CCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEE
Confidence 33444444444 4444 5999999999999887 778899999876432221 22222223 799999999
Q ss_pred EEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeee
Q 010340 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLS 215 (512)
Q Consensus 137 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~ 215 (512)
+.+...+..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .++|+
T Consensus 76 ~~~~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~ 152 (267)
T PHA03390 76 YSVTTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLC 152 (267)
T ss_pred EEEecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEe
Confidence 999999999999999999999999963 348999999999999999999999999 99999999999999888 99999
Q ss_pred cccCccccCCCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 216 CFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 216 Dfg~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
|||++..........++..|+|||++.+..++.++|||||||++|+|++|+.|+............+..... .....+
T Consensus 153 dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~ 230 (267)
T PHA03390 153 DYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFI 230 (267)
T ss_pred cCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCcc
Confidence 999988776666677899999999999888999999999999999999999886533211111111111111 111233
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-hHHHHHH
Q 010340 296 SEEATVVFDLASRCLQYEPRERPN-TKDLVST 326 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps-~~~vl~~ 326 (512)
...++.+.+++.+||+.+|.+||+ +++++++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 231 KNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred cccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 456777999999999999999995 6999875
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-40 Score=316.88 Aligned_cols=241 Identities=19% Similarity=0.267 Sum_probs=197.6
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
..||.|+||.||++.... ++..||||.+........+.+.+|+.+++.++|+||+++++.+..++..++||||++++
T Consensus 28 ~~lg~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 104 (292)
T cd06658 28 IKIGEGSTGIVCIATEKH---TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG 104 (292)
T ss_pred hcccCCCCeEEEEEEECC---CCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence 457999999999999876 67889999987654444567899999999999999999999999999999999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCcccc
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSYST 231 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 231 (512)
+|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++..... .....+
T Consensus 105 ~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 180 (292)
T cd06658 105 ALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVG 180 (292)
T ss_pred cHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeec
Confidence 9999884 346899999999999999999999998 99999999999999999999999999865432 123467
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
+..|+|||.+.+..++.++|||||||++|||++|+.|+........ ...+......... .....+..+.+++.+||.
T Consensus 181 ~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~ 257 (292)
T cd06658 181 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-MRRIRDNLPPRVK--DSHKVSSVLRGFLDLMLV 257 (292)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCCCccc--cccccCHHHHHHHHHHcc
Confidence 8899999999888899999999999999999999988654321110 0011111111111 112345568899999999
Q ss_pred cCCCCCCChHHHHHH
Q 010340 312 YEPRERPNTKDLVST 326 (512)
Q Consensus 312 ~~p~~Rps~~~vl~~ 326 (512)
.||.+|||+.+++++
T Consensus 258 ~~P~~Rpt~~~il~~ 272 (292)
T cd06658 258 REPSQRATAQELLQH 272 (292)
T ss_pred CChhHCcCHHHHhhC
Confidence 999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=310.30 Aligned_cols=243 Identities=18% Similarity=0.284 Sum_probs=200.4
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
.+++.||.|+||.||+|.+.. +++.||||.+...... ....+.+|+.++.+++||||+++++++..+...++||||
T Consensus 7 ~~~~~ig~G~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 7 TKLEKIGKGSFGEVFKGIDNR---TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhheeEeecCCeEEEEEEECC---CCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 356788999999999999876 7788999998654322 235688999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----C
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 227 (512)
+++++|.+++. ...+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06641 84 LGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence 99999999984 456899999999999999999999998 999999999999999999999999998755432 2
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
...++..|+|||.+.+..++.++|||||||++|+|++|..|+..... ......+........+...+..+.+++.
T Consensus 160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (277)
T cd06641 160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKNNPPTLEGNYSKPLKEFVE 234 (277)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcCCCCCCCcccCHHHHHHHH
Confidence 34578889999999888899999999999999999999977543211 1111111111122334455677889999
Q ss_pred HhhccCCCCCCChHHHHHHh
Q 010340 308 RCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L 327 (512)
+||..+|.+||++.+++++-
T Consensus 235 ~~l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 235 ACLNKEPSFRPTAKELLKHK 254 (277)
T ss_pred HHccCChhhCcCHHHHHhCH
Confidence 99999999999999999973
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=310.59 Aligned_cols=256 Identities=15% Similarity=0.188 Sum_probs=199.3
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEE
Q 010340 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGY 138 (512)
Q Consensus 60 ~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 138 (512)
+.+..+.++| .+++.||+|+||.||++.+.. +++.+|+|++.... .....+.+|+.+++.+ +||||++++++
T Consensus 11 ~~~~~~~~~~---~~~~~lg~g~~~~vy~~~~~~---~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 11 DSFPDPSDTW---EIIETIGKGTYGKVFKVLNKK---NGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred ecCCCcccce---eeeeeeccCCCcEEEEEEECC---CCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 3333444444 578889999999999999987 77889999986532 2245788999999999 79999999998
Q ss_pred Ee-----eCCeeEEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 139 CC-----DGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 139 ~~-----~~~~~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
+. .++..++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGG 162 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCC
Confidence 84 345689999999999999987532 3456899999999999999999999998 999999999999999999
Q ss_pred CeeecccCccccCCC----CccccCcccCCcccccC-----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccch
Q 010340 212 PRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI 282 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~ 282 (512)
+||+|||++...... ....+++.|+|||++.. ..++.++|||||||++|||++|+.|+....... ..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~----~~ 238 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR----AL 238 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH----HH
Confidence 999999998754322 23467899999999853 447889999999999999999998765321100 00
Q ss_pred hhhcccc-cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 283 LHLMDSH-LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 283 ~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
....... .....+...+..+.+|+.+||+.||++|||+.++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 FKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0100000 01111223455688999999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=312.10 Aligned_cols=251 Identities=20% Similarity=0.278 Sum_probs=194.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..+.+++.||.|+||.||+|..+. +++.||||.+....... ...+.+|+++++.++|+||+++++++.+....++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKL---TGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcC---CCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 456688899999999999999876 77889999987543322 34577899999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+.+ +|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.....
T Consensus 82 ~e~~~~-~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 82 FEYLDT-DLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred EecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 999975 99998864 3447899999999999999999999999 999999999999999999999999998654321
Q ss_pred --CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc---------------
Q 010340 227 --KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS--------------- 288 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--------------- 288 (512)
....++..|+|||++.+ ..++.++|||||||++|+|++|+.|+................+..
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 22346788999999875 458899999999999999999998764321000000000000000
Q ss_pred ------ccC-CC---CCHHHH--HHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 289 ------HLE-GN---FSSEEA--TVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 289 ------~~~-~~---~~~~~~--~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
... .. ...... ..+.+++.+||+.+|++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000 00 000111 567799999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=315.26 Aligned_cols=243 Identities=19% Similarity=0.251 Sum_probs=198.8
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
..||.|+||.||++.... +++.||+|.+........+.+.+|+.++..++||||+++++++..++..++||||++++
T Consensus 27 ~~ig~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 27 IKIGEGSTGIVCIAREKH---SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred hhcCCCCceeEEEEEEcC---CCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 367999999999999876 67889999997655455667899999999999999999999999999999999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CCcccc
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSYST 231 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~~~~~ 231 (512)
+|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++..... .....+
T Consensus 104 ~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 179 (297)
T cd06659 104 ALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG 179 (297)
T ss_pred CHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceec
Confidence 9999884 356899999999999999999999999 99999999999999999999999999865432 223567
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
+..|+|||++.+..++.++|||||||++|||++|+.|+......... ..+..... .........+..+.+++.+||+
T Consensus 180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~ 256 (297)
T cd06659 180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-KRLRDSPP--PKLKNAHKISPVLRDFLERMLT 256 (297)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhccCC--CCccccCCCCHHHHHHHHHHhc
Confidence 89999999998888999999999999999999999876532111000 00000000 0011122345568899999999
Q ss_pred cCCCCCCChHHHHHHhc
Q 010340 312 YEPRERPNTKDLVSTLA 328 (512)
Q Consensus 312 ~~p~~Rps~~~vl~~L~ 328 (512)
.+|.+||++.+++++-.
T Consensus 257 ~~P~~Rps~~~ll~~~~ 273 (297)
T cd06659 257 REPQERATAQELLDHPF 273 (297)
T ss_pred CCcccCcCHHHHhhChh
Confidence 99999999999999743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=310.37 Aligned_cols=250 Identities=21% Similarity=0.253 Sum_probs=202.7
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+++.||.|+||.||++.+.. +++.||+|.+...... ....+.+|+++++.++||||+++++++...+..++|||
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRP---TGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcC---CCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 3466788999999999999987 7888999998765432 23568999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCCCeeecccCccccCCC--C
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--K 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--~ 227 (512)
|+++++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... .
T Consensus 80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 80 YMDGGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred ecCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 99999999999642 2678999999999999999999999 88 999999999999999999999999998654321 2
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-cchhhhcccccCCCCCHH-HHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-KNILHLMDSHLEGNFSSE-EATVVFDL 305 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l 305 (512)
...++..|+|||.+.+..++.++||||||+++|+|++|+.|+.......... .....+... .....+.. .+..+.++
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 236 (265)
T cd06605 158 TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSGKFSPDFQDF 236 (265)
T ss_pred cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChhhcCHHHHHH
Confidence 2567889999999988889999999999999999999998765431000000 001111111 11222333 66778999
Q ss_pred HHHhhccCCCCCCChHHHHHHh
Q 010340 306 ASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L 327 (512)
|.+||..||++|||+.+++.+-
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~~ 258 (265)
T cd06605 237 VNLCLIKDPRERPSYKELLEHP 258 (265)
T ss_pred HHHHcCCCchhCcCHHHHhhCc
Confidence 9999999999999999998763
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=351.84 Aligned_cols=243 Identities=20% Similarity=0.229 Sum_probs=204.5
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
..||.|.||.||.|.+.+ +|...|+|-++-... ...+...+|..++..|+|||+|++||+=.+.+..+|.||||+
T Consensus 1241 ~~Ig~G~fG~VYtavN~~---tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~ 1317 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLD---TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCE 1317 (1509)
T ss_pred cccCCcceeeeEEeecCC---ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhc
Confidence 357999999999999988 899999999875433 224578899999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC------
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------ 227 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------ 227 (512)
+|+|.+++. ..+-.++.....+..|++.||.|||++| ||||||||.||+|+.+|.+|++|||.|.......
T Consensus 1318 ~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1318 GGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred cCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence 999999997 3455777778889999999999999999 9999999999999999999999999998665432
Q ss_pred --ccccCcccCCcccccCCC---CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.+.||+.|||||++.+.. ...++||||+|||++||+||+.|+... .+ +-.+.--+...-.+.+|...+.+-
T Consensus 1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~-dn---e~aIMy~V~~gh~Pq~P~~ls~~g 1470 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL-DN---EWAIMYHVAAGHKPQIPERLSSEG 1470 (1509)
T ss_pred HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhc-cc---hhHHHhHHhccCCCCCchhhhHhH
Confidence 467999999999997643 677999999999999999999885321 11 111222223344567778889999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+|+.+||..||++|.++.+++++-.
T Consensus 1471 ~dFle~Cl~~dP~~Rw~~~qlle~~f 1496 (1509)
T KOG4645|consen 1471 RDFLEHCLEQDPKMRWTASQLLEHAF 1496 (1509)
T ss_pred HHHHHHHHhcCchhhhHHHHHHHhhc
Confidence 99999999999999999999998743
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=318.29 Aligned_cols=248 Identities=21% Similarity=0.257 Sum_probs=212.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
.+.-|.+++.||.|.|+.|.++.+.. ++..||||.+.+..... ...+.+|+++|..|+|||||+++.+......+
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~---t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l 130 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHIL---TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATL 130 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecC---CCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence 34456688999999999999999988 78889999999876543 24589999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
|+||||+.+|.+++++. ..+.+.+..+..++.|+.+|++|||+++ |+|||||.+||||+.+..+||+|||++..+..
T Consensus 131 ylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999999998 5666777899999999999999999999 99999999999999999999999999987654
Q ss_pred C---CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC--CCHHHH
Q 010340 226 G---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN--FSSEEA 299 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 299 (512)
. .+++|++.|.|||++.+..| ++.+|+||+|++||.|+.|..||.. ..+..+-.+.+... ++-..+
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG--------~~lk~Lr~rvl~gk~rIp~~ms 279 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG--------QNLKELRPRVLRGKYRIPFYMS 279 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC--------cccccccchheeeeecccceee
Confidence 3 47899999999999998886 6799999999999999999988543 33333333333322 233445
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.++.++|+++|..+|.+|++++++.++-+.
T Consensus 280 ~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 280 CDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred chhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 567799999999999999999999988654
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=312.10 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=198.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|.+++.||.|+||.||+|.+.. +++.||||++...... ..+.+.+|+.++++++||||+++++++..+...++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRE---TGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred ceEEeecccCCCcEEEEEEECC---CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence 4577889999999999999977 6788999999865432 2467999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+ +++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 79 EYM-PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred ccc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 999 9999999864 3467999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc-----------------
Q 010340 227 --KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM----------------- 286 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~----------------- 286 (512)
....++..|+|||++.+.. ++.++|||||||++|||+||.+++...... .........+
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhhccCcchh
Confidence 2346788999999986544 689999999999999999997554332110 0000000000
Q ss_pred ccc-cCC-------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 287 DSH-LEG-------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 287 ~~~-~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
... ... ...+..+..+.+++.+||..+|.+|||+++++++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 000 000 01123347788999999999999999999999873
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=314.23 Aligned_cols=247 Identities=17% Similarity=0.262 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..+.+++.||.|+||.||++.... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVA---TGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcC---CCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 456678889999999999999876 67789999987655445567899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~ 171 (293)
T cd06647 96 EYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (293)
T ss_pred ecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence 9999999999995 346889999999999999999999999 999999999999999999999999987654332
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc-ccccCCCCCHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM-DSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 304 (512)
....+++.|++||.+.+..++.++|||||||++|++++|+.||....... ....+. ........+...+..+.+
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----ALYLIATNGTPELQNPEKLSAIFRD 247 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh----heeehhcCCCCCCCCccccCHHHHH
Confidence 23457888999999988889999999999999999999998765321110 000000 000111122334567889
Q ss_pred HHHHhhccCCCCCCChHHHHHHh
Q 010340 305 LASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L 327 (512)
++.+||..+|.+||++.+++.+-
T Consensus 248 li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 248 FLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred HHHHHccCChhhCcCHHHHhcCH
Confidence 99999999999999999999884
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=313.72 Aligned_cols=249 Identities=19% Similarity=0.224 Sum_probs=194.6
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
.++.||.|+||.||++.+.. +++.||||.+...... ....+.+|+.++.++. ||||+++++++..++..+++|||
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKP---SGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HHHHhCCCCceEEEEEEECC---CCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 56778999999999999987 7889999998754432 2356889999999995 99999999999999999999999
Q ss_pred cCCCCHHhhh---hhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 152 MPNDTLAKHL---FHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 152 ~~~g~L~~~l---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
+.. +|.++. .......+++..+..++.|++.||+|||+. + ++||||||+|||++.++.+||+|||++......
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 864 665543 222346799999999999999999999975 6 999999999999999999999999998754332
Q ss_pred --CccccCcccCCcccccCC---CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNG---RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
....+++.|+|||++.+. .++.++|||||||++|+|++|+.||..................+.+....+...+..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (288)
T cd06616 163 AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPS 242 (288)
T ss_pred ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHH
Confidence 234678899999999766 589999999999999999999987653321000000000000111111222345677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+.+|+.+||+.+|++|||+.+|+++-
T Consensus 243 l~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 243 FVNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCh
Confidence 89999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=306.73 Aligned_cols=246 Identities=20% Similarity=0.251 Sum_probs=202.7
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee--CCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 147 (512)
|.+++.||.|+||.||++.+.. ++..||+|.+....... .+.+..|+.+++.++||||+++++++.. +...++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKS---DGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecC---CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence 4577889999999999999887 77889999987554322 3468899999999999999999998864 456899
Q ss_pred EEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHh-----cCCCccccccCccceeecCCCCCeeecccCc
Q 010340 148 VAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCS-----SEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a 220 (512)
+|||+++++|.+++... ....+++..++.++.||+.||.||| +.+ ++|+||||+||+++.++.+||+|||++
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEeccccc
Confidence 99999999999999642 2467999999999999999999999 887 999999999999999999999999998
Q ss_pred cccCCCC----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH
Q 010340 221 KNSRDGK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296 (512)
Q Consensus 221 ~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (512)
....... ...++..|+|||.+.+..++.++||||||+++|+|++|+.|+...... .+...+........+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 232 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-----QLASKIKEGKFRRIPY 232 (265)
T ss_pred ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-----HHHHHHhcCCCCCCcc
Confidence 8654432 346789999999998888999999999999999999999876543211 1111122222233455
Q ss_pred HHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 297 EEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 297 ~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..+..+.+++.+||+.+|++||++.+|+++
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 666788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=308.95 Aligned_cols=246 Identities=21% Similarity=0.237 Sum_probs=202.9
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.+++.||.|+||.||+|.+.. +++.||+|++...... ..+.+.+|+.++++++||||+++++++.++...++|
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRD---TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLV 78 (258)
T ss_pred ceEEEEeccCCCceEEEEEEcc---CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEE
Confidence 4577889999999999999876 7888999999865432 246789999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 79 VDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred EeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCcc
Confidence 999999999999963 358999999999999999999999999 999999999999999999999999998765443
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....++..|+|||++.+..++.++|+||||+++|+|++|+.|+....... ...+...... .....+...+..+.++
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAKQET-ADVLYPATWSTEAIDA 232 (258)
T ss_pred ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHHhcc-ccccCcccCcHHHHHH
Confidence 24557888999999988889999999999999999999998865432100 0011111110 2233445566788999
Q ss_pred HHHhhccCCCCCCCh--HHHHHH
Q 010340 306 ASRCLQYEPRERPNT--KDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rps~--~~vl~~ 326 (512)
+.+||..||.+||++ .+++++
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred HHHHccCChhHcCCccHHHHhcC
Confidence 999999999999999 766543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-39 Score=305.58 Aligned_cols=245 Identities=22% Similarity=0.314 Sum_probs=199.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|.+.+.||+|+||.||+|.... +++.|++|.+...... ..+.+.+|+.+++.++|+||+++++++...+..++|+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLD---TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECC---CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEE
Confidence 4466788999999999999876 7788999999866543 3467999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++. ....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 79 EYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ecCCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999997 3456889999999999999999999999 9999999999999999999999999987654321
Q ss_pred ------ccccCcccCCcccccCCC---CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH-
Q 010340 228 ------SYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE- 297 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 297 (512)
...++..|+|||++.+.. ++.++||||||+++|+|++|+.||........ ............++..
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~ 231 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ----IMFHVGAGHKPPIPDSL 231 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH----HHHHHhcCCCCCCCccc
Confidence 235678999999998766 88999999999999999999987643211100 0000011111222222
Q ss_pred -HHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 298 -EATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 298 -~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 232 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 232 QLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 36678899999999999999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=309.16 Aligned_cols=246 Identities=18% Similarity=0.285 Sum_probs=199.7
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
....||+|+||.||++.... +++.||+|++...... ..+.+.+|+++++.++|+||+++++++.+.+..++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~---~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVK---TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccceecCcCceEEEEEEEcC---CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 45667999999999999876 7888999998754321 13568999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeeecccCccccCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRDG 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~ 226 (512)
||||+++++|.+++. ....+++..+..++.||+.||.|||+++ ++|+||||+||+++.++ .+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 999999999999996 3457899999999999999999999999 99999999999998776 5999999998654321
Q ss_pred --------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 227 --------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 227 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+........ ...+............+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIFKIASATTAPSIPEHL 236 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHHHHhccCCCCCCchhh
Confidence 134578899999999888899999999999999999999987643211000 00111111112233455567
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+..+.+++.+||..+|.+||++.+++++
T Consensus 237 ~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 237 SPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 7889999999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=335.06 Aligned_cols=255 Identities=14% Similarity=0.178 Sum_probs=185.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEe--------------cCcc---CCCChhHHHHHHHHHhcCCCCCc
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKK--------------FTKH---AWPDPKQFADEAWGVGKLRHKRL 132 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~--------------~~~~---~~~~~~~~~~E~~~l~~l~h~ni 132 (512)
..|.+++.||+|+||.||++..+.. .+..+++|. +.+. .......+.+|+.+|++++||||
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRAS--TEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEecc--chhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4577899999999999999876542 112222221 1111 00113468899999999999999
Q ss_pred cceEEEEeeCCeeEEEEEccCCCCHHhhhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC
Q 010340 133 ANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (512)
Q Consensus 133 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 209 (512)
|++++++...+..++|+|++. ++|.+++.... ........+..|+.||+.||.|||+++ ||||||||+|||++.+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~ 303 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCD 303 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCC
Confidence 999999999999999999995 57877775321 122345677889999999999999999 9999999999999999
Q ss_pred CCCeeecccCccccCCC-----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH-----HHHhc
Q 010340 210 GDPRLSCFGLMKNSRDG-----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL-----DMIRG 279 (512)
Q Consensus 210 ~~~kl~Dfg~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-----~~~~~ 279 (512)
+.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..+|+.... .....
T Consensus 304 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 99999999999765432 235689999999999998999999999999999999999865543210 00000
Q ss_pred c---------------chhhhcccc----cCCCCCH-----HHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 280 K---------------NILHLMDSH----LEGNFSS-----EEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 280 ~---------------~~~~~~~~~----~~~~~~~-----~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
. .....+... ....++. ..+..+.+++.+||+.||.+|||+.|++.+-.
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 0 000000000 0000000 12345778899999999999999999998744
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-39 Score=307.27 Aligned_cols=251 Identities=20% Similarity=0.292 Sum_probs=196.4
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCC------ee
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD------ER 145 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 145 (512)
+.+.||+|+||.||+|.+.....+++.||||++....... .+++.+|+.+++.++||||+++++++.... ..
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP 82 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence 5567899999999999987654468899999997654322 456889999999999999999999986532 24
Q ss_pred EEEEEccCCCCHHhhhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 146 LLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
++++||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccccc
Confidence 7899999999999887431 1235789999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCC
Q 010340 222 NSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNF 294 (512)
Q Consensus 222 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (512)
...... ...+++.|++||.+.+..++.++|||||||++|||++ |+.|+....... ....+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~ 236 (273)
T cd05074 162 KIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE-----IYNYLIKGNRLKQ 236 (273)
T ss_pred cccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH-----HHHHHHcCCcCCC
Confidence 653321 2234567999999988889999999999999999999 665543221111 1111101111122
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 237 PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 334556788999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=321.94 Aligned_cols=244 Identities=22% Similarity=0.229 Sum_probs=205.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
.+.+|.+...+|.|+|+.|-.+.... +++..+||++.+.. .+..+|+.++... +||||+++.+.+.++.+.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~---t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSP---TDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccc---cccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceee
Confidence 35566777789999999999999988 78889999998762 3455678777666 8999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee-cCCCCCeeecccCccccCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF-DENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill-~~~~~~kl~Dfg~a~~~~~ 225 (512)
+|||.+.|+-|.+.+. ....+. ..+..|+.+|+.|+.|||++| +|||||||+|||+ ++.++++|+|||.++....
T Consensus 393 ~v~e~l~g~ell~ri~--~~~~~~-~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIR--SKPEFC-SEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eeehhccccHHHHHHH--hcchhH-HHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 9999999998877775 233333 777889999999999999999 9999999999999 6999999999999987765
Q ss_pred C-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 226 G-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 226 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
. .+.+-|..|.|||++....|+.++||||||++||+||+|+.|+.....+ .++......+.+....+..+++
T Consensus 469 ~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKd 541 (612)
T KOG0603|consen 469 SCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKD 541 (612)
T ss_pred hhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHH
Confidence 5 2335688999999999889999999999999999999999886544222 3444444555566778888999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhcc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
|+.+||+.||.+|+++.+++.+=+.
T Consensus 542 Ll~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 542 LLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HHHHhccCChhhCcChhhhccCcch
Confidence 9999999999999999999988555
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=308.88 Aligned_cols=249 Identities=20% Similarity=0.256 Sum_probs=195.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHH-HhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWG-VGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+++.||+|+||.||++.+.. +++.||+|++...... ....+..|+.+ ++.++||||+++++++...+..++|
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVP---TGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcC---CCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 34577889999999999999987 7899999998765432 23456667665 5666999999999999999999999
Q ss_pred EEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 149 AEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
|||++ |+|.+++... ....+++..++.++.||+.||.|||++ + ++||||||+|||++.++.+||+|||++.....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99997 5888887542 335789999999999999999999997 7 99999999999999999999999999876543
Q ss_pred C---CccccCcccCCcccccC----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC-HH
Q 010340 226 G---KSYSTNLAYTPPEYLRN----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-SE 297 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 297 (512)
. ....++..|+|||++.+ ..++.++|+|||||++|+|++|+.|+....... ......... .....+ ..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~-~~~~~~~~~ 232 (283)
T cd06617 157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF---QQLKQVVEE-PSPQLPAEK 232 (283)
T ss_pred ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH---HHHHHHHhc-CCCCCCccc
Confidence 2 22457889999999864 446889999999999999999998764321100 011111111 111121 23
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+..+.+++.+||..+|.+||++.+++++-.
T Consensus 233 ~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 263 (283)
T cd06617 233 FSPEFQDFVNKCLKKNYKERPNYPELLQHPF 263 (283)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 4667899999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=313.09 Aligned_cols=250 Identities=20% Similarity=0.296 Sum_probs=196.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.+.+++.||.|+||.||+|.+.. +++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..++|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKE---TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECC---CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE
Confidence 35577889999999999999986 6788999998754332 245688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++++|..+.. ....+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 79 FEFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred EecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 99999999988775 3445899999999999999999999998 999999999999999999999999998764332
Q ss_pred --CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH--hc----cch----hhh------cc
Q 010340 227 --KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI--RG----KNI----LHL------MD 287 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~--~~----~~~----~~~------~~ 287 (512)
....++..|+|||++.+. .++.++|||||||++|||++|+.|+........ .. ... ... ..
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 234578899999998753 478899999999999999999876643211000 00 000 000 00
Q ss_pred cccCCC---------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 288 SHLEGN---------FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 288 ~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...... ..+..+..+.+|+.+||..+|++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000 012345678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=305.11 Aligned_cols=243 Identities=22% Similarity=0.272 Sum_probs=198.7
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-----ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.+.||+|+||.||+|.... +++.|++|.+...... ..+.+.+|+.+++.++|+||+++++++......++|
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLD---DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ccceeeecCCceEEEEEEcC---CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 44667999999999999986 6788999998754321 235689999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 81 LELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred EEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence 999999999999963 456899999999999999999999999 999999999999999999999999998764332
Q ss_pred -CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....++..|++||.+.... ++.++|+|||||++|+|++|+.|+....... ..............+...++.+.+
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 233 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA----AVFKIGRSKELPPIPDHLSDEAKD 233 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH----HHHHHHhcccCCCcCCCcCHHHHH
Confidence 3456788999999997766 8999999999999999999998764322100 011111101122334455677889
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 010340 305 LASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~ 326 (512)
++.+||..+|.+||++.+++.+
T Consensus 234 li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 234 FILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHHHhhcCcccCcCHHHHhcC
Confidence 9999999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=297.19 Aligned_cols=259 Identities=17% Similarity=0.233 Sum_probs=202.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee-CCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD-GDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 145 (512)
..|.+++.||+|+||.||+++.++++. ..+.+|||.++.....+ .....+|+.+++.++||||+.+..++.. +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 357789999999999999998776542 13479999998653322 3568899999999999999999999987 7889
Q ss_pred EEEEEccCCCCHHhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC----CCCeeeccc
Q 010340 146 LLVAEYMPNDTLAKHLFHW---ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN----GDPRLSCFG 218 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfg 218 (512)
+|++||.+. +|+.+|+.. ....++...+..|+-||+.|+.|||++= |+||||||.|||+..+ |.+||+|||
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeeccc
Confidence 999999988 899999753 2356889999999999999999999998 9999999999999766 999999999
Q ss_pred CccccCC-------CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc--------cch
Q 010340 219 LMKNSRD-------GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG--------KNI 282 (512)
Q Consensus 219 ~a~~~~~-------~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~--------~~~ 282 (512)
+++.+.+ ....+.|+.|.|||.+.|.. ||.+.|||+.|||+.||+|-++.|.+........ ..+
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 9987654 23456799999999999866 8999999999999999999997665432211110 111
Q ss_pred hhhcccccCCCCC---------------------H-----------HHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 283 LHLMDSHLEGNFS---------------------S-----------EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 283 ~~~~~~~~~~~~~---------------------~-----------~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+++.......+| . .-++...+|+.++|..||-+|.|+++.+++.-..
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~ 341 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT 341 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence 1111111111111 0 0123367899999999999999999999986443
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=311.26 Aligned_cols=252 Identities=20% Similarity=0.250 Sum_probs=197.5
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeC--Ce
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG--DE 144 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 144 (512)
+..+.+++.||.|+||.||+|.+.. +++.+|+|.++...... ...+.+|+.++.+++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKK---TGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECC---CCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCc
Confidence 3456678889999999999999986 78889999997554322 23577899999999999999999999877 88
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++....
T Consensus 81 ~~lv~e~~~~-~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 81 IYMVMEYVEH-DLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EEEEehhcCc-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9999999975 99998864 3346899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC----CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc--------------------
Q 010340 225 DG----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-------------------- 279 (512)
Q Consensus 225 ~~----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------------------- 279 (512)
.. ....+++.|+|||.+.+.. ++.++||||||+++|+|++|..|+..........
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 43 2345678899999987654 6889999999999999999997764321100000
Q ss_pred -----cchhhhcccccCCCCCHH-HHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 280 -----KNILHLMDSHLEGNFSSE-EATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 280 -----~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..........+...++.. .+..+.++|.+||+.+|++|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000000111112222 35668899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=307.68 Aligned_cols=254 Identities=19% Similarity=0.232 Sum_probs=200.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEee--CCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 148 (512)
+..++.||.|++|.||++.+.. +++.||+|.+...... ....+.+|+++++.++||||++++++|.. .+.+++|
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKN---TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred eEEEEEeccCCceEEEEEEECC---CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 4467788999999999999987 7889999998865432 24578999999999999999999999865 3468999
Q ss_pred EEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 149 AEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
|||+++++|.+++.. .....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 999999999988753 23456899999999999999999999999 999999999999999999999999998754332
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc----cccCCCCC--HHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD----SHLEGNFS--SEE 298 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~ 298 (512)
....++..|++||.+.+..++.++|||||||++|+|++|+.|+................+. ..+..... ...
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd06621 159 LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKW 238 (287)
T ss_pred ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCch
Confidence 2345688899999998888999999999999999999999876543110000000011100 01111111 124
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++.+.+++.+||..+|.+|||+.+++++-.-
T Consensus 239 ~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 239 SEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred HHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 5678899999999999999999999997543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=310.60 Aligned_cols=257 Identities=16% Similarity=0.178 Sum_probs=200.4
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceE
Q 010340 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLI 136 (512)
Q Consensus 58 ~~~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 136 (512)
.+.++..++++| .++..||.|+||.||++.... +++.+|+|++.... .....+.+|+.++.++ +||||++++
T Consensus 13 ~~~~~~~~~~~y---~~~~~l~~g~~~~vy~~~~~~---~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~ 85 (291)
T cd06639 13 GLESLGDPTDTW---EIIETIGKGTYGKVYKVTNKK---DGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFY 85 (291)
T ss_pred hcccCCCCCCCe---EEEEEeecCCCeEEEEEEECC---CCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 334444445444 477788999999999999987 78889999987543 2245788999999999 899999999
Q ss_pred EEEeeC-----CeeEEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC
Q 010340 137 GYCCDG-----DERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (512)
Q Consensus 137 ~~~~~~-----~~~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 209 (512)
+++... +..++||||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.+
T Consensus 86 ~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~ 164 (291)
T cd06639 86 GMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTE 164 (291)
T ss_pred EEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCC
Confidence 998753 3589999999999999988532 3457899999999999999999999998 9999999999999999
Q ss_pred CCCeeecccCccccCCC----CccccCcccCCcccccCCC-----CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc
Q 010340 210 GDPRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRNGR-----VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK 280 (512)
Q Consensus 210 ~~~kl~Dfg~a~~~~~~----~~~~~t~~y~aPE~~~~~~-----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~ 280 (512)
+.+||+|||++...... ....++..|+|||++.... ++.++|||||||++|||++|+.|+...... .
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~----~ 240 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----K 240 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH----H
Confidence 99999999998754332 2346788999999985432 688999999999999999999876532111 0
Q ss_pred chhhhccccc-CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 281 NILHLMDSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 281 ~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
....+..... ....+...+..+.++|.+||+.+|++||++.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 241 TLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0111111100 011123345568899999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=306.05 Aligned_cols=247 Identities=16% Similarity=0.203 Sum_probs=197.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCC------
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGD------ 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------ 143 (512)
.|.+++.||.|+||.||+|.+.. +++.+++|++..... ..+.+.+|+.+++++ .|+||+++++++....
T Consensus 7 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 7 IFELVEVIGEGTYGKVYKARHKK---TGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred heeheeeecCCCCeEEEEEEECC---CCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 45578889999999999999976 678899999876543 346799999999999 7999999999997644
Q ss_pred eeEEEEEccCCCCHHhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.+++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccce
Confidence 4899999999999999986433 567999999999999999999999999 9999999999999999999999999986
Q ss_pred ccCCC----CccccCcccCCcccccC-----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc-C
Q 010340 222 NSRDG----KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL-E 291 (512)
Q Consensus 222 ~~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (512)
..... ....++..|+|||++.. ..++.++|||||||++|+|++|+.|+...... .....+..... .
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~ 237 (275)
T cd06608 162 QLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM----RALFKIPRNPPPT 237 (275)
T ss_pred ecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH----HHHHHhhccCCCC
Confidence 54332 23457889999998753 34778999999999999999999876432111 11111111111 1
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...+...+..+.+|+.+||..||.+|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 238 LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11123356678999999999999999999999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=310.57 Aligned_cols=242 Identities=19% Similarity=0.258 Sum_probs=197.8
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
.+.||.|++|.||++.... +++.+++|++........+.+.+|+.+++.++||||+++++++...+..++|+||+++
T Consensus 24 ~~~lg~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKS---TGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred ceEeccCCCeEEEEEEECC---CCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 3567999999999999876 6788999998755444456789999999999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----Cccc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYS 230 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~ 230 (512)
++|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....
T Consensus 101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 176 (285)
T cd06648 101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV 176 (285)
T ss_pred CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence 999999953 56899999999999999999999999 999999999999999999999999987654322 2345
Q ss_pred cCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhh
Q 010340 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310 (512)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 310 (512)
++..|+|||.+.+..++.++|||||||++|+|++|+.|+......... .......... ...+...+..+.+++.+||
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~li~~~l 253 (285)
T cd06648 177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM-KRIRDNLPPK--LKNLHKVSPRLRSFLDRML 253 (285)
T ss_pred CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH-HHHHhcCCCC--CcccccCCHHHHHHHHHHc
Confidence 788999999998888999999999999999999999876542111000 0011110000 1112234567899999999
Q ss_pred ccCCCCCCChHHHHHH
Q 010340 311 QYEPRERPNTKDLVST 326 (512)
Q Consensus 311 ~~~p~~Rps~~~vl~~ 326 (512)
..+|++|||+.+++++
T Consensus 254 ~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 254 VRDPAQRATAAELLNH 269 (285)
T ss_pred ccChhhCcCHHHHccC
Confidence 9999999999999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=303.80 Aligned_cols=241 Identities=20% Similarity=0.229 Sum_probs=198.6
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
||.|+||.||++.+.. +++.||+|++...... ..+.+.+|+.+++.++||||+++++++.++...++||||+++
T Consensus 1 lg~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (262)
T cd05572 1 LGVGGFGRVELVKVKS---KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLG 77 (262)
T ss_pred CCCCCceEEEEEEECC---CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCC
Confidence 5999999999999976 6888999999765432 235799999999999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---Ccccc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KSYST 231 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~ 231 (512)
++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....+
T Consensus 78 ~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~ 154 (262)
T cd05572 78 GELWTILRD--RGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCG 154 (262)
T ss_pred CcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccC
Confidence 999999963 456899999999999999999999998 999999999999999999999999998765443 23467
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
+..|++||.+.+..++.++|+||||+++|+|++|..|+.....+.. .....+........++...+..+.+++.+||.
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 232 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM--EIYNDILKGNGKLEFPNYIDKAAKDLIKQLLR 232 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH--HHHHHHhccCCCCCCCcccCHHHHHHHHHHcc
Confidence 8899999999888899999999999999999999987654321000 01111111112233444456789999999999
Q ss_pred cCCCCCCC-----hHHHHHH
Q 010340 312 YEPRERPN-----TKDLVST 326 (512)
Q Consensus 312 ~~p~~Rps-----~~~vl~~ 326 (512)
.+|++||+ +.+++++
T Consensus 233 ~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 233 RNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred CChhhCcCCcccCHHHHhcC
Confidence 99999999 7777765
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=310.23 Aligned_cols=249 Identities=21% Similarity=0.255 Sum_probs=196.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+++.||.|+||.||+|.+.. +++.||||.+...... ....+.+|++++++++||||+++++++.+....++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKL---TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred ceeeeeecCCCceEEEEEEECC---CCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence 3467888999999999999886 7888999998754322 2357889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+. ++|.+++.......+++..++.++.||+.||+|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 9996 58999887555677999999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh-------------------
Q 010340 227 -KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL------------------- 285 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~------------------- 285 (512)
....++..|+|||++.+.. ++.++|||||||++|+|+||+.||........... ....
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHhCCCChhhhhhhhHHHHHH
Confidence 2234678899999987654 68899999999999999999987654321100000 0000
Q ss_pred --cccccCC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 286 --MDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 286 --~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
....... ...+..+..+.++|.+||+.||.+|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 236 PSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000000 0012234567899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=304.21 Aligned_cols=247 Identities=22% Similarity=0.266 Sum_probs=204.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+++.||.|++|.||++.+.. +++.|+||++..... .....+.+|+.++.+++|+||+++++++...+..++|||
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~---~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKP---TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcC---CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 4567888999999999999987 788999999987654 234679999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
|+++++|.+++.. ...+++..++.++.|+++||.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 80 YMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred ecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 9999999999973 3679999999999999999999999 88 9999999999999999999999999987654322
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH-HHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE-EATVVFD 304 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 304 (512)
...++..|+|||.+.+..++.++||||||+++|+|+||+.|+........ ......+. .......+.. .+..+.+
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~l~~ 234 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF-FELMQAIC-DGPPPSLPAEEFSPEFRD 234 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH-HHHHHHHh-cCCCCCCCcccCCHHHHH
Confidence 34578899999999888899999999999999999999987643310000 00011111 1112223333 5677999
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 010340 305 LASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~ 326 (512)
++.+||..+|++||++.+++++
T Consensus 235 li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 235 FISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHccCChhhCCCHHHHHhC
Confidence 9999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=307.45 Aligned_cols=247 Identities=18% Similarity=0.265 Sum_probs=201.9
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.+...||.|+||.||+|.+.. ++..|++|++..... ..+.+.+|+++++.++|+||+++++++......++|+||
T Consensus 21 ~~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 21 YKNLEKIGEGASGEVYKATDRA---TGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred chHhHhccCCCCeEEEEEEEcc---CCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 4466778999999999999986 678899999986543 456789999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----C
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~ 227 (512)
+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 97 ~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 97 MDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhc
Confidence 99999999997422 47999999999999999999999998 999999999999999999999999987654332 2
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC-CCCHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG-NFSSEEATVVFDLA 306 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li 306 (512)
...++..|++||++.+..++.++|||||||++|+|++|+.|+........ ...+....... ..+...+..+.+++
T Consensus 175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li 250 (286)
T cd06614 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA----LFLITTKGIPPLKNPEKWSPEFKDFL 250 (286)
T ss_pred cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhcCCCCCcchhhCCHHHHHHH
Confidence 34567899999999888899999999999999999999977543211100 01111111111 11223567789999
Q ss_pred HHhhccCCCCCCChHHHHHHhc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+||+.+|.+|||+.+++++..
T Consensus 251 ~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 251 NKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred HHHhccChhhCcCHHHHhhChH
Confidence 9999999999999999998644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=304.58 Aligned_cols=250 Identities=18% Similarity=0.259 Sum_probs=198.0
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----------CChhHHHHHHHHHhc-CCCCCccceEEEEe
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----------PDPKQFADEAWGVGK-LRHKRLANLIGYCC 140 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~h~niv~l~~~~~ 140 (512)
|.+++.||.|+||.||+|.+..+ .++.+|||.+..... ....++.+|+.++.+ ++||||+++++++.
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 79 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNN--GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL 79 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCC--CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc
Confidence 34677889999999999998753 457899998864321 112457788888875 69999999999999
Q ss_pred eCCeeEEEEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCCCeeecc
Q 010340 141 DGDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 141 ~~~~~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
+++..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||||+|||++.++.++|+||
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999998853 234568999999999999999999996 56 999999999999999999999999
Q ss_pred cCccccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCC
Q 010340 218 GLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF 294 (512)
Q Consensus 218 g~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (512)
|++...... ....++..|++||++.+..++.++||||||+++|+|++|+.|+......... ..+.........
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~ 234 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA----TKIVEAVYEPLP 234 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHH----HHHhhccCCcCC
Confidence 998765443 2446788999999999888999999999999999999999775432111111 011111111111
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....+..+.+++.+||+.||++||++.++.+++.
T Consensus 235 ~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 235 EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1234567889999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=307.18 Aligned_cols=243 Identities=19% Similarity=0.236 Sum_probs=195.8
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
||+|+||.||++.... +++.||+|.+...... ....+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 1 lg~g~~g~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (277)
T cd05577 1 LGKGGFGEVCACQVKA---TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNG 77 (277)
T ss_pred CCCCCceeEEEEEEcC---CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCC
Confidence 5999999999999877 7889999998754321 234578899999999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---Ccccc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KSYST 231 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~ 231 (512)
++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....+
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccC
Confidence 99999997544457999999999999999999999999 999999999999999999999999988764432 23456
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
+..|++||++.+..++.++|||||||++|+|++|+.|+....... ....+..... ......+...++.+.+++.+||+
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~ 234 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTL-EMAVEYPDKFSPEAKDLCEALLQ 234 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhccc-cccccCCccCCHHHHHHHHHHcc
Confidence 788999999988889999999999999999999998764321100 0000001000 11222334456778999999999
Q ss_pred cCCCCCC-----ChHHHHHH
Q 010340 312 YEPRERP-----NTKDLVST 326 (512)
Q Consensus 312 ~~p~~Rp-----s~~~vl~~ 326 (512)
.||.+|| ++.+++.+
T Consensus 235 ~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 235 KDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CChhHccCCCcccHHHHHhC
Confidence 9999999 66667765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=304.14 Aligned_cols=246 Identities=18% Similarity=0.271 Sum_probs=201.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+.+.||.|+||.||++.... ++..||+|.+..... ...+.+.+|+.+++.++|+||+++++.+......++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKS---DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcC---CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEE
Confidence 3456778999999999999987 778899999876432 23457889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC-CeeecccCccccCCCC-
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-PRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-~kl~Dfg~a~~~~~~~- 227 (512)
||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++. +||+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9999999999997545556899999999999999999999998 999999999999998764 6999999987654432
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...+++.|+|||++.+..++.++|||||||++|+|++|..|+........ ........ .....+..+..+.+
T Consensus 158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~ 232 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL----VLKICQGY-FAPISPNFSRDLRS 232 (257)
T ss_pred cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHhccc-CCCCCCCCCHHHHH
Confidence 23578899999999888899999999999999999999987653221111 11111111 11223344567889
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 010340 305 LASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~ 326 (512)
++.+||..+|++|||+.+++++
T Consensus 233 ~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 233 LISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHHhccChhhCcCHHHHhhC
Confidence 9999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=306.85 Aligned_cols=242 Identities=19% Similarity=0.173 Sum_probs=191.2
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHh---cCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVG---KLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~---~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
||+|+||.||++.+.. +++.+|||.+....... ...+.+|..+++ ...||||+.+++++...+..++||||
T Consensus 2 lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (279)
T cd05633 2 IGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL 78 (279)
T ss_pred cccCCCeEEEEEEECC---CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence 6999999999999886 78899999987654321 223445554443 34799999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--Ccc
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KSY 229 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--~~~ 229 (512)
+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++...... ...
T Consensus 79 ~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (279)
T cd05633 79 MNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (279)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence 99999999886 4457999999999999999999999999 999999999999999999999999998654332 234
Q ss_pred ccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 230 STNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 230 ~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
.++..|+|||.+.+ ..++.++|||||||++|+|++|..||......... ..... ........+...+..+.+++.+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~li~~ 232 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRM-TLTVNVELPDSFSPELKSLLEG 232 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHH-hhcCCcCCccccCHHHHHHHHH
Confidence 68999999999864 55899999999999999999999887532110000 00010 1111223445566778999999
Q ss_pred hhccCCCCCC-----ChHHHHHHhc
Q 010340 309 CLQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 309 cl~~~p~~Rp-----s~~~vl~~L~ 328 (512)
||..||.+|| ++++++++..
T Consensus 233 ~l~~~p~~R~~~~~~~~~~~~~h~~ 257 (279)
T cd05633 233 LLQRDVSKRLGCLGRGAQEVKEHVF 257 (279)
T ss_pred HhcCCHHHhcCCCCCCHHHHHhCcc
Confidence 9999999999 5999988843
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=305.70 Aligned_cols=244 Identities=18% Similarity=0.266 Sum_probs=197.9
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCC---CCCccceEEEEeeCCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLR---HKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~l 147 (512)
|.+++.||.|+||.||+|.+.. +++.||+|.+..... ...+.+.+|+.+++.++ ||||+++++++..+...++
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVP---TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhheeccCCceEEEEEEcC---CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 3456778999999999999876 788999999876432 23457889999999996 9999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++++|.+++.. ..+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 9999999999999853 47899999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH-HHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS-EEATV 301 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 301 (512)
....++..|+|||.+.++ .++.++|||||||++|+|++|..|+........ ...........++. ..+..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 230 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-----MMLIPKSKPPRLEDNGYSKL 230 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-----hhccccCCCCCCCcccCCHH
Confidence 234678899999998654 478899999999999999999987643211110 00111111112222 25567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+.+++.+||..||++||++.+++.+-
T Consensus 231 ~~~~i~~~l~~~p~~R~~~~~il~~~ 256 (277)
T cd06917 231 LREFVAACLDEEPKERLSAEELLKSK 256 (277)
T ss_pred HHHHHHHHcCCCcccCcCHHHHhhCh
Confidence 88999999999999999999998863
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=303.40 Aligned_cols=242 Identities=18% Similarity=0.181 Sum_probs=191.4
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHH-hcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGV-GKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.||.|+||.||+|.... +++.||||++....... ...+..|..++ ...+|+||+++++++...+..++||||
T Consensus 2 ~~l~~g~~~~v~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRS---TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecC---CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEec
Confidence 567999999999999977 77889999987543222 12345555544 455899999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCcccc
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST 231 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 231 (512)
+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........+
T Consensus 79 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (260)
T cd05611 79 LNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVG 155 (260)
T ss_pred cCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCC
Confidence 99999999996 3457899999999999999999999998 99999999999999999999999999887655556678
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
+..|++||.+.+..++.++||||||+++|+|++|..|+........... ... ............++..+.+++.+||+
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~ 233 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDN-ILS-RRINWPEEVKEFCSPEAVDLINRLLC 233 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHh-cccCCCCcccccCCHHHHHHHHHHcc
Confidence 8999999999888889999999999999999999987653321111000 000 00011112223456778999999999
Q ss_pred cCCCCCCChHHHHH
Q 010340 312 YEPRERPNTKDLVS 325 (512)
Q Consensus 312 ~~p~~Rps~~~vl~ 325 (512)
.+|++||++.++.+
T Consensus 234 ~~p~~R~~~~~~~~ 247 (260)
T cd05611 234 MDPAKRLGANGYQE 247 (260)
T ss_pred CCHHHccCCCcHHH
Confidence 99999997654433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=268.62 Aligned_cols=248 Identities=21% Similarity=0.286 Sum_probs=197.1
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
....+||+|.||+||++++.. +++.||+|.++.+... .+....+||-+++.++|.|||+++++...+..+-+|+|
T Consensus 5 dkmekigegtygtvfkarn~~---t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 5 DKMEKIGEGTYGTVFKARNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred HHHHhhcCCcceeeEecccCC---ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 346678999999999999998 8899999999865432 25678999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
||.. +|..+... -++.++...+..++.|+++||.|+|+++ +.||||||.|+||+.+|++||.|||+++.+.-.
T Consensus 82 ~cdq-dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcy 158 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY 158 (292)
T ss_pred HhhH-HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEee
Confidence 9965 88888754 6788999999999999999999999999 999999999999999999999999999865533
Q ss_pred CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCC-CChhh-HHHHh------c-------cchhhhccccc
Q 010340 227 KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHI-PPSHA-LDMIR------G-------KNILHLMDSHL 290 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~-~~~~~-~~~~~------~-------~~~~~~~~~~~ 290 (512)
...+.|..|.+|.++.|.+ |++..|+||.|||+.|+.....| |++.- .+... + ..+.++.+...
T Consensus 159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~ 238 (292)
T KOG0662|consen 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKP 238 (292)
T ss_pred eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcc
Confidence 2335689999999998866 89999999999999999875544 44331 11110 0 01111111111
Q ss_pred CCCCC---------HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 291 EGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 291 ~~~~~---------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+.++ +.....-.+++.+.|.-+|.+|.++++.+++
T Consensus 239 yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 239 YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred cCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 11121 2222345689999999999999999999876
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=311.00 Aligned_cols=248 Identities=21% Similarity=0.190 Sum_probs=195.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-----ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+.+++.||.|+||.||+|.+.. +++.||||.+...... ....+..|+++++.++|+||+++++++.+....+
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 78 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKE---TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNIN 78 (298)
T ss_pred ceeeeeeeeccccEEEEEEECC---CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEE
Confidence 3456778999999999999887 6788999999865433 1245778999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+ +++|.+++... ...+++..++.++.||++||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 79 lv~e~~-~~~L~~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 79 LVFEFM-ETDLEKVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEEccc-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 999999 88999999642 237999999999999999999999999 999999999999999999999999998765432
Q ss_pred ----CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchh------------------
Q 010340 227 ----KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL------------------ 283 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~------------------ 283 (512)
....+++.|+|||.+.+ ..++.++|||||||++|||++|..++........ .....
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ-LGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH-HHHHHHHcCCCchhhhhhccccc
Confidence 22345778999999865 4578899999999999999999755432211000 00000
Q ss_pred hhcccccCCC-----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 284 HLMDSHLEGN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 284 ~~~~~~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.......... .....+..+.+++.+||+.+|++|||+.+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 112335678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=308.51 Aligned_cols=250 Identities=22% Similarity=0.300 Sum_probs=198.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.+.+++.||+|+||.||+|.+.. +++.||||+++..... ..+.+.+|+++++.++|+||+++++++..++..++|
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~---~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKA---TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCC---CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEE
Confidence 35577889999999999999987 6788999998754322 246789999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||++++.|..++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 79 FEYVERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99999877766554 3456899999999999999999999998 9999999999999999999999999987654332
Q ss_pred ----ccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHH--Hhccc--------hhhhc--ccc-
Q 010340 228 ----SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDM--IRGKN--------ILHLM--DSH- 289 (512)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~--~~~~~--------~~~~~--~~~- 289 (512)
...++..|+|||++.+. .++.++||||||+++|+|++|+.|+....... ..... ..... +..
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 34568889999999887 78999999999999999999997765321100 00000 00000 000
Q ss_pred ----c---------CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 290 ----L---------EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 290 ----~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. ...++...+..+.+||.+||..+|++|||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0 001122336778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=306.13 Aligned_cols=250 Identities=21% Similarity=0.232 Sum_probs=193.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.|.+++.||+|+||.||+|.... +++.||+|++....... ...+.+|+.+++.++|+||+++++++..+...++||
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRI---NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcC---CCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 45678889999999999999887 77889999987654332 346789999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 159 (291)
T cd07870 83 EYMH-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT 159 (291)
T ss_pred eccc-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCC
Confidence 9996 677777653 3456788889999999999999999998 999999999999999999999999998754321
Q ss_pred -CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccch------------------hhhc
Q 010340 227 -KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI------------------LHLM 286 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~------------------~~~~ 286 (512)
....+++.|+|||++.+. .++.++|||||||++|+|++|..||.........-... ....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK 239 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccccc
Confidence 233468899999998764 47889999999999999999998764321100000000 0000
Q ss_pred ccccCCCCC---------HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 287 DSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 287 ~~~~~~~~~---------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
........+ ...+..+.+++.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred chhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000000 0113567899999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=318.16 Aligned_cols=237 Identities=18% Similarity=0.222 Sum_probs=194.6
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEE---EEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCe--eEEEEE
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIA---VKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE--RLLVAE 150 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~va---vK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~E 150 (512)
.||+|+|-+||+|.+.. +|..|| ||.-..... ...++|..|+.+|+.|+||||+++|++|.+... +.+|+|
T Consensus 47 vLGrGafKtVYka~De~---~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEE---EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hcccccceeeeeccccc---cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 56999999999999977 666666 333222111 224689999999999999999999999987654 889999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeec-CCCCCeeecccCccccCC--C
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNSRD--G 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~~--~ 226 (512)
++..|+|..+++ ..+.++...+..|++||++||.|||++. +|||||||-+||+|+ .-|.+||+|+|+|..... .
T Consensus 124 L~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 124 LFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred cccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 999999999997 5677899999999999999999999987 699999999999997 568999999999986543 3
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH----HHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS----EEATVV 302 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 302 (512)
....|||.|||||+.- ..|+...||||||++++||+|+..|+.. ..+..++......+..|. ...+++
T Consensus 202 ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE-------C~n~AQIYKKV~SGiKP~sl~kV~dPev 273 (632)
T KOG0584|consen 202 KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE-------CTNPAQIYKKVTSGIKPAALSKVKDPEV 273 (632)
T ss_pred ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh-------hCCHHHHHHHHHcCCCHHHhhccCCHHH
Confidence 4578999999999996 7899999999999999999999987533 233344444333333332 234679
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHh
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.+||.+||.. ..+|||+.|+|++-
T Consensus 274 r~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 274 REFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred HHHHHHHhcC-chhccCHHHHhhCh
Confidence 9999999999 99999999999873
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=311.44 Aligned_cols=246 Identities=18% Similarity=0.214 Sum_probs=191.4
Q ss_pred CCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCCC
Q 010340 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156 (512)
Q Consensus 79 G~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 156 (512)
|.|+||+||++.+.. +++.||||++....... .+.+.+|+.+++.++||||++++++|..++..++||||+.+++
T Consensus 9 g~~~~~~v~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~ 85 (328)
T cd08226 9 GFCNLTSVYLARHTP---TGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGS 85 (328)
T ss_pred cccCceeEEEEEEcC---CCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCC
Confidence 445999999999877 78899999987654322 3568899999999999999999999999999999999999999
Q ss_pred HHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----C------
Q 010340 157 LAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----G------ 226 (512)
Q Consensus 157 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~------ 226 (512)
|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++++||+.+..... .
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (328)
T cd08226 86 ANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDF 164 (328)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccc
Confidence 999997644556899999999999999999999998 99999999999999999999999985432211 0
Q ss_pred -CccccCcccCCcccccCC--CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-----ccch----------------
Q 010340 227 -KSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-----GKNI---------------- 282 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-----~~~~---------------- 282 (512)
....++..|+|||++.+. .++.++|||||||++|+|++|+.|+......... ....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (328)
T cd08226 165 PQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMK 244 (328)
T ss_pred cccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhc
Confidence 111245679999999764 4789999999999999999999876532111000 0000
Q ss_pred ---------------h-----hhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 283 ---------------L-----HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 283 ---------------~-----~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
. ......+....+...+..+.+|+.+||..||++|||+.+++++-.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 245 NSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred cchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0 000001111122345677899999999999999999999998854
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=307.50 Aligned_cols=249 Identities=20% Similarity=0.214 Sum_probs=200.5
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..++.||.|+||.||+|.... ++..||+|.+....... ..++.+|+++++.++|+||+++++++......++||
T Consensus 18 ~~~~~lg~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 18 SDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHheeeCCCEEEEEEEEcC---CCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 356778999999999999987 77889999987533222 346788999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCcc
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY 229 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 229 (512)
||+. |+|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++.........
T Consensus 95 e~~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (308)
T cd06634 95 EYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 171 (308)
T ss_pred EccC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccc
Confidence 9996 588877753 3456899999999999999999999998 999999999999999999999999998877666667
Q ss_pred ccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 230 STNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 230 ~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
.+++.|+|||.+. ...++.++|||||||++|+|++|..|+........ ...+.............+..+.+||
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li 247 (308)
T cd06634 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPALQSGHWSEYFRNFV 247 (308)
T ss_pred cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH----HHHHhhcCCCCcCcccccHHHHHHH
Confidence 7899999999974 34578899999999999999999987643211100 0111111111111234556788999
Q ss_pred HHhhccCCCCCCChHHHHHHhcccc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+||..+|++||++.+++++.....
T Consensus 248 ~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 248 DSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred HHHhhCCcccCCCHHHHhhCccccc
Confidence 9999999999999999998865543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=305.21 Aligned_cols=241 Identities=19% Similarity=0.271 Sum_probs=196.7
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
..||+|+||.||++.... +++.||||++..........+.+|+.+++.++|+||+++++++..++..++||||++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 26 IKIGEGSTGIVCIATVKS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHcCCCCCeEEEEEEEcC---CCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 457999999999999887 78899999986544444567899999999999999999999999999999999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----Ccccc
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYST 231 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~ 231 (512)
+|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....+
T Consensus 103 ~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 178 (292)
T cd06657 103 ALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG 178 (292)
T ss_pred cHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceeccccccccccccc
Confidence 9999884 456899999999999999999999998 999999999999999999999999987654322 23467
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhc
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 311 (512)
+..|++||.+.+..++.++|+|||||++|+|++|..|+......... ..........+. .....+..+.+++.+||.
T Consensus 179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~ 255 (292)
T cd06657 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPKLK--NLHKVSPSLKGFLDRLLV 255 (292)
T ss_pred CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhhCCcccC--CcccCCHHHHHHHHHHHh
Confidence 88999999998888999999999999999999999876532111100 001111111110 112345568899999999
Q ss_pred cCCCCCCChHHHHHH
Q 010340 312 YEPRERPNTKDLVST 326 (512)
Q Consensus 312 ~~p~~Rps~~~vl~~ 326 (512)
.+|.+||++.+++++
T Consensus 256 ~~P~~R~~~~~ll~~ 270 (292)
T cd06657 256 RDPAQRATAAELLKH 270 (292)
T ss_pred CCcccCcCHHHHhcC
Confidence 999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=297.69 Aligned_cols=245 Identities=21% Similarity=0.287 Sum_probs=203.0
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
|.+.+.||.|++|.||++.+.. +++.+++|++..........+.+|+.+++.++|+||+++++++......++++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKR---TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred ceeeeeeccCCceEEEEEEECC---CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 3456778999999999999986 6788999999876554557899999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---Cc
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KS 228 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~~ 228 (512)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 79 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 156 (253)
T cd05122 79 CSGGSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT 156 (253)
T ss_pred CCCCcHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccc
Confidence 999999999864 2257999999999999999999999998 999999999999999999999999998766543 35
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC--HHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS--SEEATVVFDLA 306 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li 306 (512)
..++..|++||.+.+..++.++||||||+++|+|++|+.|+......... ..... ......+ ...+..+.+++
T Consensus 157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~i 231 (253)
T cd05122 157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL----FKIAT-NGPPGLRNPEKWSDEFKDFL 231 (253)
T ss_pred eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH----HHHHh-cCCCCcCcccccCHHHHHHH
Confidence 56788999999998888999999999999999999999876543111000 00000 1111111 12256788999
Q ss_pred HHhhccCCCCCCChHHHHHH
Q 010340 307 SRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+||..||.+|||+.+++++
T Consensus 232 ~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 232 KKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HHHccCChhhCCCHHHHhcC
Confidence 99999999999999999876
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=315.99 Aligned_cols=280 Identities=18% Similarity=0.205 Sum_probs=225.5
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+++..+|.-||-||||.|=++.... ....+|+|++++...-+ .+.+..|-.+|...+.|.||++|-.|.+...+
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~---~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNS---QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecc---cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 3445577889999999999998875 33469999999876544 34688899999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
||.||-|-||.|+..|+ ..+.|+..+...++..+++|+.|||+++ ||+|||||+|.|+|.+|-+||.|||+|+....
T Consensus 496 YmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999999998 6788999999999999999999999999 99999999999999999999999999998766
Q ss_pred CC---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 GK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 ~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.. +++||+.|.|||++.+...+.++|.||||+++|||++|.+||.. .........+..-++. ..+|...+...
T Consensus 573 g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~-~dpmktYn~ILkGid~---i~~Pr~I~k~a 648 (732)
T KOG0614|consen 573 GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSG-VDPMKTYNLILKGIDK---IEFPRRITKTA 648 (732)
T ss_pred CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCC-CchHHHHHHHHhhhhh---hhcccccchhH
Confidence 44 67999999999999999999999999999999999999976543 2222222223332222 25677777888
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccccCCCCCCCCCCCCCCCCCC
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 360 (512)
.+||.+++..+|.+|... ....+..+++..++....|.+......+||..++-.+|
T Consensus 649 ~~Lik~LCr~~P~ERLG~--~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~p 704 (732)
T KOG0614|consen 649 TDLIKKLCRDNPTERLGY--QKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANP 704 (732)
T ss_pred HHHHHHHHhcCcHhhhcc--ccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCc
Confidence 999999999999999651 11122233444556666777776666666554444444
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=300.43 Aligned_cols=244 Identities=19% Similarity=0.209 Sum_probs=198.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-----CChhHHHHHHHHHhcCCCCCccceEEEEeeC--Ce
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-----PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DE 144 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 144 (512)
+.+.+.||+|+||.||++.+.. +++.||+|.+..... .....+.+|++++++++|+||+++++++.+. ..
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDAD---TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcC---CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCE
Confidence 4566788999999999999886 788999998754321 1234688999999999999999999998764 46
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
+++||||+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++...
T Consensus 81 ~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 889999999999999986 3456889999999999999999999999 9999999999999999999999999987543
Q ss_pred C-------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 225 D-------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 225 ~-------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
. .....++..|+|||++.+..++.++|||||||++|+|++|+.|+..... ...+...........++..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~p~~ 233 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAIFKIATQPTKPMLPDG 233 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHHHHHHcCCCCCCCCcc
Confidence 2 1234578899999999888899999999999999999999977643211 1112222222233445666
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.++.+.+++.+||. +|..||++.+++.|
T Consensus 234 ~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 234 VSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred cCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 77789999999999 57999999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=306.39 Aligned_cols=243 Identities=20% Similarity=0.227 Sum_probs=196.4
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+++||+|+||.||+|.+.. +++.|++|++....... ...+.+|+++++.++||||+++++++.+....++|||
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSH---TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred cceeeccCCCeEEEEEEECC---CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 35668999999999999876 78889999987544332 2467889999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCccc
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS 230 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 230 (512)
|+. |+|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++..........
T Consensus 102 ~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~ 178 (313)
T cd06633 102 YCL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFV 178 (313)
T ss_pred cCC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCcc
Confidence 996 578887754 4557899999999999999999999999 9999999999999999999999999987665555677
Q ss_pred cCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 231 TNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 231 ~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
++..|+|||++. ...++.++|||||||++|+|++|..|+......... ..+.............+..+.+|+.
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~ 254 (313)
T cd06633 179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNDSPTLQSNEWTDSFRGFVD 254 (313)
T ss_pred ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHHhcCCCCCCccccCHHHHHHHH
Confidence 899999999984 356888999999999999999999876543111100 0111111111112233456889999
Q ss_pred HhhccCCCCCCChHHHHHH
Q 010340 308 RCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~ 326 (512)
+||+.+|.+||++.+++.+
T Consensus 255 ~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 255 YCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999976
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-38 Score=306.22 Aligned_cols=255 Identities=21% Similarity=0.239 Sum_probs=197.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeC--C
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG--D 143 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 143 (512)
+.+.+.+++.||.|+||.||+|.+.. +++.||+|++....... ...+.+|+.++++++|+||+++++++... +
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTT---SGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECC---CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCC
Confidence 44567788899999999999999987 78889999987543222 23567899999999999999999998764 5
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
..++||||+.+ +|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...
T Consensus 82 ~~~lv~e~~~~-~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 82 SIFLVMEYCEQ-DLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred eEEEEEecCCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeec
Confidence 68999999965 88888864 3467999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC----CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc-----------
Q 010340 224 RDG----KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD----------- 287 (512)
Q Consensus 224 ~~~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~----------- 287 (512)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.|+........ ...+.....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ-LDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChhhchhhh
Confidence 432 12345778999999865 4578999999999999999999977653211100 000000000
Q ss_pred ------c-ccC-CCC------CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 288 ------S-HLE-GNF------SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 288 ------~-~~~-~~~------~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
. ... ... ....++.+.++|.+||+.||++|||+.+++.+-+-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f 293 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 0 000 000 01135667899999999999999999999987544
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=296.56 Aligned_cols=244 Identities=20% Similarity=0.286 Sum_probs=202.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+.+.||.|++|.||++.+.. +++.|++|.+..... ...+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLE---TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcC---CCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEE
Confidence 3466788999999999999886 678899999987654 23457999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 99999999999963 367999999999999999999999999 9999999999999999999999999987655433
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
...++..|+|||.+.+..++.++||||||+++|+|++|+.|+....... ...... .......+...+..+.++
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~ 230 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA----ALFRIV-QDDHPPLPEGISPELKDF 230 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHh-ccCCCCCCCCCCHHHHHH
Confidence 3467889999999988778999999999999999999997764321100 011111 111223344556778899
Q ss_pred HHHhhccCCCCCCChHHHHHH
Q 010340 306 ASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.+||..+|++|||+.+++.+
T Consensus 231 i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 231 LMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHHHHhCChhhCcCHHHHhcC
Confidence 999999999999999999864
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=300.64 Aligned_cols=268 Identities=18% Similarity=0.206 Sum_probs=213.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
.+++..||.|+||.|.++..+. +.+.+|||+++++... +.+--+.|-++|... +-|.+++++..|...+.+|+
T Consensus 351 FnFl~VlGKGSFGKVlLaerkg---tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 351 FNFLMVLGKGSFGKVLLAERKG---TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred cceEEEeccCccceeeeecccC---cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 4477888999999999999887 7788999999987542 234466788888877 67899999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC---
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR--- 224 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~--- 224 (512)
||||+.||+|--+++ +-+.+.+..+..++.+|+-||-|||+++ ||+||||.+|||+|.+|++||.|||+++.--
T Consensus 428 VMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~ 504 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG 504 (683)
T ss_pred EEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCC
Confidence 999999999988887 6678999999999999999999999999 9999999999999999999999999997532
Q ss_pred -CCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 225 -DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 225 -~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...+++|||.|+|||++...+|+.+.|+|||||+||||+.|++||.++-.+... ..+.+ ..-.+|...+.++.
T Consensus 505 ~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF----~aI~e--hnvsyPKslSkEAv 578 (683)
T KOG0696|consen 505 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF----QAIME--HNVSYPKSLSKEAV 578 (683)
T ss_pred cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHH--ccCcCcccccHHHH
Confidence 245789999999999999999999999999999999999999887654322221 12221 12356778888899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccccCCCCCCCCCCC
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPT 353 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (512)
.+....|.+.|.+|....---+ ..+...+......|..+......||.
T Consensus 579 ~ickg~ltK~P~kRLGcg~~ge--~di~~H~FFR~iDWek~E~~eiqPPf 626 (683)
T KOG0696|consen 579 AICKGLLTKHPGKRLGCGPEGE--RDIREHPFFRRIDWEKLERREIQPPF 626 (683)
T ss_pred HHHHHHhhcCCccccCCCCccc--cchhhCcchhhccHHHHhhccCCCCC
Confidence 9999999999999964321100 23334444445555555555554444
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=303.87 Aligned_cols=249 Identities=20% Similarity=0.245 Sum_probs=195.3
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+++.||.|++|.||+|.+.. +++.||||++...... ..+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKL---TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred chheEecCCCCeEEEEEEEcC---CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence 466788999999999999877 7888999998765422 23568899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
|++ ++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 156 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY 156 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc
Confidence 995 68999986544457899999999999999999999998 999999999999999999999999998754321
Q ss_pred CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc-----------------chhhh---
Q 010340 227 KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK-----------------NILHL--- 285 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-----------------~~~~~--- 285 (512)
....++..|+|||++.+. .++.++||||||+++|+|++|+.||........... .....
T Consensus 157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07835 157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT 236 (283)
T ss_pred CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhh
Confidence 223457889999988664 478899999999999999999977653211100000 00000
Q ss_pred cccc---cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 286 MDSH---LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 286 ~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.... ......+..+..+.+++.+||+.+|.+|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 237 FPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred cccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 0001112234668899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-38 Score=303.31 Aligned_cols=254 Identities=12% Similarity=0.054 Sum_probs=185.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh-----------hHHHHHHHHHhcCCCCCccceEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-----------KQFADEAWGVGKLRHKRLANLIGYC 139 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~~~ 139 (512)
.+.+.+.||+|+||.||+|....+...+..+|+|+......... .....+...+..+.|+||+++++.+
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 56678889999999999999876322256678876543322110 1123344556777999999999987
Q ss_pred eeCC----eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeee
Q 010340 140 CDGD----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (512)
Q Consensus 140 ~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 215 (512)
.... ..+++||++.. ++.+.+.. ....++..++.|+.|++.||.|||+.+ ++||||||+|||++.++.++|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 93 SFKRCRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred eEecCCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEE
Confidence 6543 34788888744 67777652 234678889999999999999999998 9999999999999999999999
Q ss_pred cccCccccCC-----------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH-HHHhccchh
Q 010340 216 CFGLMKNSRD-----------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL-DMIRGKNIL 283 (512)
Q Consensus 216 Dfg~a~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-~~~~~~~~~ 283 (512)
|||+++.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~ 248 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC 248 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH
Confidence 9999875421 1224689999999999999999999999999999999999987654311 100000001
Q ss_pred hhcccccCCC-CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 284 HLMDSHLEGN-FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 284 ~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..+....... ..+.++..+.+++..||..+|++||++.++++.|.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 249 DFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1111111111 12234577889999999999999999999998763
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=304.24 Aligned_cols=252 Identities=21% Similarity=0.208 Sum_probs=195.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..+.+++.||.|++|.||+|.+.. +++.||+|.+...... ..+.+.+|++++++++||||+++++++......++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 78 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRV---TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYL 78 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecC---CCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEE
Confidence 356678889999999999999877 7888999998764332 23568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CCCCeeecccCccccCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~ 226 (512)
||||++ ++|.+++.......+++..+..++.||+.||.|||+++ ++|+||||+||+++. ++.+||+|||++......
T Consensus 79 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 79 VFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred EEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 999996 58888886544445788899999999999999999998 999999999999985 557999999998754322
Q ss_pred ----CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-------cchhhhcc-------
Q 010340 227 ----KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-------KNILHLMD------- 287 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------~~~~~~~~------- 287 (512)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.|+.......... ......+.
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 234567899999998664 57899999999999999999997765321110000 00000000
Q ss_pred -----cccCCC----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 288 -----SHLEGN----FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 288 -----~~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...... ..+..+..+.+++.+||+.+|++||++.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 012235568899999999999999999999986
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=301.06 Aligned_cols=247 Identities=21% Similarity=0.265 Sum_probs=191.8
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeC--CeeEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDG--DERLLV 148 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~~lv 148 (512)
.+++.||+|+||.||+|.... +++.||+|+++..... ......+|+.++.++ +|+||+++++++.+. +..++|
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~---~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRK---TGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred ceEeeccccccceEEEEEEcC---CCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 467889999999999999886 7888999998764322 223456799999998 499999999999987 889999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++. +.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 79 FELMDM-NLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred EecCCc-cHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 999974 88888864 3357899999999999999999999999 999999999999999 99999999998765432
Q ss_pred -CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-H------hccchh---hhccc--ccCC
Q 010340 227 -KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-I------RGKNIL---HLMDS--HLEG 292 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-~------~~~~~~---~~~~~--~~~~ 292 (512)
....++..|+|||++.. +.++.++|||||||++|||++|..|+....... . .+.... ..... ....
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 23457889999998654 457889999999999999999987765321100 0 000000 00000 0000
Q ss_pred C-----------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 293 N-----------FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 293 ~-----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. .....+..+.+||.+||+.+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0 012346789999999999999999999999876
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=300.00 Aligned_cols=241 Identities=20% Similarity=0.181 Sum_probs=190.5
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHH---HHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEA---WGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
||+|+||.||++.... +++.||+|.+....... ...+..|. .+++...||||+.+++++...+..++||||
T Consensus 2 ig~g~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (278)
T cd05606 2 IGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 78 (278)
T ss_pred cccCCCeEEEEEEEec---CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEec
Confidence 6999999999999876 78899999987643221 12244443 345556899999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--CCcc
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--GKSY 229 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--~~~~ 229 (512)
++|++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..... ....
T Consensus 79 ~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (278)
T cd05606 79 MNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (278)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence 99999999886 4567999999999999999999999999 99999999999999999999999999875432 2245
Q ss_pred ccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 230 STNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 230 ~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
.|+..|+|||++.++ .++.++|||||||++|+|++|+.|+......... ...... ......++...+..+.+++.+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~~~~~~-~~~~~~~~~~~s~~~~~li~~ 232 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMT-LTMAVELPDSFSPELRSLLEG 232 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--HHHHHh-hccCCCCCCcCCHHHHHHHHH
Confidence 688999999999754 5899999999999999999999876543110000 000000 111223344456778999999
Q ss_pred hhccCCCCCC-----ChHHHHHHh
Q 010340 309 CLQYEPRERP-----NTKDLVSTL 327 (512)
Q Consensus 309 cl~~~p~~Rp-----s~~~vl~~L 327 (512)
||..+|.+|| ++.+++++-
T Consensus 233 ~l~~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred HhhcCHHhccCCCCCCHHHHHhCc
Confidence 9999999999 999998763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=296.93 Aligned_cols=246 Identities=20% Similarity=0.236 Sum_probs=204.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|.+++.||.|+||.||++.+.. +++.|++|++..... .....+.+|+++++.++|||++++++.+......++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKS---DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcC---CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEE
Confidence 4467788999999999999976 678899999986544 33467899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 150 EYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||+++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999997532 477999999999999999999999998 9999999999999999999999999987654432
Q ss_pred ----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...+++.|+|||.+.+..++.++||||||+++++|++|+.|+.......... ... .......+...+..+.
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 232 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELAL----KIL-KGQYPPIPSQYSSELR 232 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHH----HHh-cCCCCCCCCCCCHHHH
Confidence 3457888999999988889999999999999999999998764332111111 111 1112233445567789
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 010340 304 DLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+++.+||..+|++|||+.+++++
T Consensus 233 ~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 233 NLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHHHcCCChhhCcCHHHHhcC
Confidence 99999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=287.88 Aligned_cols=245 Identities=19% Similarity=0.237 Sum_probs=193.1
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEcc
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
+++||.|+||+|+|-.++. +|+..|||+++.... .+.+++..|.++..+- +.||||++||.+..++..||.||+|
T Consensus 69 lg~iG~G~fG~V~KM~hk~---sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKP---SGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHhcCCcchhhhhhhcCc---cCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 6788999999999999988 899999999986554 2345788898876555 8999999999999999999999999
Q ss_pred CCCCHHhhh---hhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 153 PNDTLAKHL---FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 153 ~~g~L~~~l---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
+- +|..+. ..-....+++...-.|..-...||.||...-.||||||||+|||++..|.+||||||++....++
T Consensus 146 d~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk 224 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK 224 (361)
T ss_pred hh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHh
Confidence 54 665443 33356779999999999999999999998766999999999999999999999999998765432
Q ss_pred CccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc---cccCCCC-CHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD---SHLEGNF-SSEEAT 300 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 300 (512)
+.-.|-..|||||-+.. ..|+-+|||||||++|||+.||+.|...+..- + .++..++. +.+.... ....+.
T Consensus 225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv-f--eql~~Vv~gdpp~l~~~~~~~~~s~ 301 (361)
T KOG1006|consen 225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV-F--EQLCQVVIGDPPILLFDKECVHYSF 301 (361)
T ss_pred hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH-H--HHHHHHHcCCCCeecCcccccccCH
Confidence 34467789999999943 35899999999999999999999775543211 1 11111111 1111111 123566
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+..+|..||.+|-.+||.+.+++++
T Consensus 302 ~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 302 SMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHHHHHhhcccccCcchhhhhcC
Confidence 78999999999999999999998775
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=310.86 Aligned_cols=249 Identities=17% Similarity=0.211 Sum_probs=194.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeC-----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 142 (512)
..|.+++.||+|+||.||++.+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++...
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTV---TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECC---CCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 345678889999999999999987 788899999875322 2235678899999999999999999998643
Q ss_pred -CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
...++||||+.+ +|.+.+.. .+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccce
Confidence 357999999965 88888852 2899999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-Hh------cc-----------
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-IR------GK----------- 280 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-~~------~~----------- 280 (512)
..... ....++..|+|||++.+..++.++|||||||++|+|++|+.||....... +. +.
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T cd07850 167 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQP 246 (353)
T ss_pred eCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 65433 23457889999999999899999999999999999999998765321000 00 00
Q ss_pred chh---------------hhcccccC----CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 281 NIL---------------HLMDSHLE----GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 281 ~~~---------------~~~~~~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
... .+...... ...+...+..+.+++.+||+.||++|||+.+++++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 247 TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 000 00000000 000123456688999999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-38 Score=309.01 Aligned_cols=248 Identities=20% Similarity=0.274 Sum_probs=192.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeC-----Ce
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDG-----DE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 144 (512)
+|.+++.||+|+||.||+|.+.. +++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKP---TGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcC---CCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 45577889999999999999887 788899999874322 2235688899999999999999999987654 35
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+.+ +|.+++ ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 83 ~~lv~e~~~~-~l~~~~---~~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 83 VYIVQELMET-DLYKLI---KTQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEEehhccc-CHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 7999999965 888887 3457999999999999999999999999 9999999999999999999999999987543
Q ss_pred CC-------CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-H------hc----cchhhh
Q 010340 225 DG-------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-I------RG----KNILHL 285 (512)
Q Consensus 225 ~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-~------~~----~~~~~~ 285 (512)
.. ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.|+....... . .. .....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 22 12457889999998754 468999999999999999999998765321100 0 00 000000
Q ss_pred cc--------cc-cCCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 286 MD--------SH-LEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 286 ~~--------~~-~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.. .. ..... .+..+..+.+++.+||+.+|++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00 00000 11235668899999999999999999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=305.86 Aligned_cols=243 Identities=22% Similarity=0.219 Sum_probs=203.5
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
.||.|.||+||-|.++. +|+.||||++.+..... ..++++|+.+|+.+.||.||.+.-.|+..+.+++|||-+.|
T Consensus 571 vLGSGQFG~VYgg~hRk---tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 571 VLGSGQFGTVYGGKHRK---TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred hccCCcceeeecceecc---cCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 57999999999999998 89999999998876544 45799999999999999999999999999999999999955
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC---CCCeeecccCccccCCC---Cc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGLMKNSRDG---KS 228 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~---~~ 228 (512)
++.+.+...+.+.|++.....++.||+.||.|||.++ |+|+||||+|||+... -.+||||||+|+...+. .+
T Consensus 648 -DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs 725 (888)
T KOG4236|consen 648 -DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS 725 (888)
T ss_pred -hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh
Confidence 6666665557889999999999999999999999999 9999999999999643 46999999999987664 46
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (512)
.+||++|+|||++....|+..-|+||.|||+|--++|..||..+.. +. ..++...-...+....+.++.+.+||..
T Consensus 726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--In--dQIQNAaFMyPp~PW~eis~~AidlIn~ 801 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--IN--DQIQNAAFMYPPNPWSEISPEAIDLINN 801 (888)
T ss_pred hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hh--HHhhccccccCCCchhhcCHHHHHHHHH
Confidence 7899999999999999999999999999999999999987654311 10 0011111112233346777889999999
Q ss_pred hhccCCCCCCChHHHHHHhc
Q 010340 309 CLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 309 cl~~~p~~Rps~~~vl~~L~ 328 (512)
+|+..-.+|.|....+.+.+
T Consensus 802 LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 802 LLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred HHHHHHHHhcchHhhccchh
Confidence 99999999999988877643
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=302.08 Aligned_cols=250 Identities=20% Similarity=0.275 Sum_probs=196.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+++.||.|++|.||+|.+.. +++.||||++...... ....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRT---TGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred ceEeeeeccCCceEEEEEEECC---CCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4577889999999999999987 7889999999865433 24567889999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 151 YMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
|+++ +|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 9985 8888886422 346899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc-----------hhhhcc-cccCC
Q 010340 227 -KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN-----------ILHLMD-SHLEG 292 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~ 292 (512)
....++..|++||++.+. .++.++|||||||++|+|++|+.|+............ +..+.. .....
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 234568889999998664 4688999999999999999999776432111000000 000000 00000
Q ss_pred C-----------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 293 N-----------FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 293 ~-----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. ..+..+..+.+++.+||+.||.+||++.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 112345668899999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=295.98 Aligned_cols=245 Identities=20% Similarity=0.258 Sum_probs=203.1
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeC--CeeEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 148 (512)
.+.+.||+|++|.||+|.... +++.|++|++..... ...+.+.+|+.++++++||||+++++.+... ...++|
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 3 TRGELLGRGSFGSVYLALDKD---TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred eeeeEeeecCceEEEEEEECC---CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 345677999999999999987 788899999876543 2356799999999999999999999999988 889999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 80 LEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 999999999999974 338999999999999999999999998 999999999999999999999999998765443
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
....++..|++||.+.+..++.++||||||+++|+|++|..|+....... .....+.........+...+..+
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l 233 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM---AALYKIGSSGEPPEIPEHLSEEA 233 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---HHHHhccccCCCcCCCcccCHHH
Confidence 23457889999999988889999999999999999999998765432000 01111111112233445557789
Q ss_pred HHHHHHhhccCCCCCCChHHHHHH
Q 010340 303 FDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+++.+||..+|.+||++.+++.+
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 234 KDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHHHhCcCChhhCCCHHHHhhC
Confidence 999999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=305.05 Aligned_cols=251 Identities=21% Similarity=0.264 Sum_probs=191.6
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCC---
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGD--- 143 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 143 (512)
...|.+++.||+|+||.||+|.... +++.||||.+...... ....+.+|+.++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKK---TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPY 87 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECC---CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence 3456788899999999999999887 7889999998654322 1345678999999999999999999987654
Q ss_pred -----eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeeccc
Q 010340 144 -----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (512)
Q Consensus 144 -----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 218 (512)
..++||||+.+ +|.+++.. ....+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||
T Consensus 88 ~~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 88 NRYKGSFYLVFEFCEH-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred cCCCceEEEEEcCCCc-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCC
Confidence 35999999965 88888853 3346899999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCC--------CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh----
Q 010340 219 LMKNSRDG--------KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL---- 285 (512)
Q Consensus 219 ~a~~~~~~--------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~---- 285 (512)
++...... ....++..|+|||++.+.. ++.++||||||+++|||+||+.|+......... ..+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~-~~~~~~~~~~ 243 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQL-TLISQLCGSI 243 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCC
Confidence 98754321 1234678899999986654 788999999999999999999765432111000 000000
Q ss_pred -------------ccc-ccCCCC---------CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 286 -------------MDS-HLEGNF---------SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 286 -------------~~~-~~~~~~---------~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
... ...... +......+.+||.+||..||.+|||+++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 000000 00123456799999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=346.32 Aligned_cols=244 Identities=25% Similarity=0.402 Sum_probs=196.5
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
...||+|+||.||+|.... +++.||||++..... ....|++++++++|||||+++|+|.+....++||||+++
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~ 767 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIK---NGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEG 767 (968)
T ss_pred ccEEccCCCeeEEEEEECC---CCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCC
Confidence 3456999999999999876 788899999875432 223568999999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCccccccCccceeecCCCCCeeecccCccccCCCCcccc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS---SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST 231 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH---~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 231 (512)
|+|.++++ .++|..+..|+.||+.||+||| +.+ ++||||||+||+++.++..++. ||............+
T Consensus 768 g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~ 840 (968)
T PLN00113 768 KNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFI 840 (968)
T ss_pred CcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCccc
Confidence 99999995 3899999999999999999999 446 9999999999999998888876 666554444444578
Q ss_pred CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH------H----HHhccchhhhcccccCC--CCCHHHH
Q 010340 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL------D----MIRGKNILHLMDSHLEG--NFSSEEA 299 (512)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~------~----~~~~~~~~~~~~~~~~~--~~~~~~~ 299 (512)
|+.|+|||++.+..++.++|||||||++|||+||+.|+..... . .........++++.+.. ..+....
T Consensus 841 t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (968)
T PLN00113 841 SSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEI 920 (968)
T ss_pred cccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHH
Confidence 8999999999988999999999999999999999988642110 0 00111122233333322 2344556
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.++.+++.+||+.||++|||+.++++.|+.+..
T Consensus 921 ~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 921 VEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 678899999999999999999999999998764
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-38 Score=309.39 Aligned_cols=249 Identities=20% Similarity=0.271 Sum_probs=195.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeC-----C
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG-----D 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 143 (512)
.|.+++.||.|+||.||++.+.. +++.||||.+..... .....+.+|+.+++.++|+||+++++++... .
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSE---TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecC---CCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 45577889999999999999876 788999999875422 2245678899999999999999999988654 3
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
..++||||+. ++|.+++. ....+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 4799999996 68998886 4567999999999999999999999998 999999999999999999999999998765
Q ss_pred CCC----CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-------------------Hhc
Q 010340 224 RDG----KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-------------------IRG 279 (512)
Q Consensus 224 ~~~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-------------------~~~ 279 (512)
... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... ...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07858 159 SEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRN 238 (337)
T ss_pred CCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCc
Confidence 433 23457889999998865 458899999999999999999998764321000 000
Q ss_pred cchhhhcc---cccCC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 280 KNILHLMD---SHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 280 ~~~~~~~~---~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
......+. ..... ...+..+..+.+++.+||+.+|++|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 239 EKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000000 00000 0112345678899999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=302.36 Aligned_cols=249 Identities=19% Similarity=0.221 Sum_probs=192.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCe----
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE---- 144 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~---- 144 (512)
+.+++.||+|+||.||+|.+.. +++.||||.+...... ....+.+|+.+++.+ +||||+++++++.....
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~---~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKN---TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred ceEeeEecccCCeEEEEEEECC---CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 4467788999999999999987 7889999998754322 235788999999999 56999999999987665
Q ss_pred -eEEEEEccCCCCHHhhhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CCCCeeecccC
Q 010340 145 -RLLVAEYMPNDTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGL 219 (512)
Q Consensus 145 -~~lv~E~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~ 219 (512)
.++||||+++ +|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeeccc
Confidence 8999999986 8988886422 346899999999999999999999999 999999999999998 89999999999
Q ss_pred ccccCCC----CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc--------
Q 010340 220 MKNSRDG----KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM-------- 286 (512)
Q Consensus 220 a~~~~~~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~-------- 286 (512)
+...... ....+++.|+|||++.+ ..++.++|||||||++|+|++|..||........ ...+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFKLLGTPTEQVW 236 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHhCCCChhhC
Confidence 8754321 22346788999999865 4579999999999999999999977654211100 00000000
Q ss_pred -------c----cccCC----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 287 -------D----SHLEG----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 287 -------~----~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. ..... ...+..+..+.++|.+||..||.+||++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00000 0012345668899999999999999999999876
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=295.58 Aligned_cols=246 Identities=17% Similarity=0.215 Sum_probs=203.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+++.||.|+||.||++.... +++.+|+|.+....... ...+.+|+++++.++|+||+++++++.+....++||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLS---DNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred ceEeeeecCCCceeEEEEEECC---CCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe
Confidence 4567788999999999999876 77889999987644322 346889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 150 EYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 999999999998642 2356899999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....++..|++||.+.+..++.++|+||||+++|+|++|+.|+....... .............+...+..+.++
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l 232 (256)
T cd08530 158 AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-----LRYKVQRGKYPPIPPIYSQDLQNF 232 (256)
T ss_pred cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHhcCCCCCCchhhCHHHHHH
Confidence 23457889999999988889999999999999999999998764322111 111111122233445667789999
Q ss_pred HHHhhccCCCCCCChHHHHHH
Q 010340 306 ASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.+||..+|++|||+.+++++
T Consensus 233 i~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 233 IRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHHHcCCCcccCCCHHHHhcC
Confidence 999999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=298.71 Aligned_cols=238 Identities=21% Similarity=0.238 Sum_probs=193.6
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
||.|+||.||++.+.. +++.+++|++..... ...+.+.+|++++++++||||+++++.+..+...++||||+++
T Consensus 1 lg~g~~~~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (265)
T cd05579 1 ISKGAYGRVFLAKKKS---TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPG 77 (265)
T ss_pred CCCCCceEEEEEEECC---CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCC
Confidence 5899999999999986 688999999976543 2345789999999999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--------
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------- 226 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-------- 226 (512)
++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 78 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 78 GDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 999999974 347899999999999999999999999 999999999999999999999999988653322
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH--HHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE--EAT 300 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 300 (512)
....++..|++||.+.+...+.++||||||+++|+|++|..|+......... ..+... ...++.. .+.
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~ 228 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF----QNILNG--KIEWPEDVEVSD 228 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHhcC--CcCCCccccCCH
Confidence 2235678899999998888999999999999999999999876533221111 111110 1112222 267
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.+.+++.+||+.+|.+|||+..+.+.|
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 229 EAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 788999999999999999994444443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=300.25 Aligned_cols=247 Identities=24% Similarity=0.294 Sum_probs=195.0
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC--CCChhHHHHHHHHHhcCCCCCccceEEEEeeC--CeeEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 148 (512)
.+++.||.|+||.||+|.... +++.+|+|++.... ......+.+|+++++.++||||+++++++... +..++|
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKK---TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred eeeEEeccCCCeEEEEEEECC---CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 467889999999999999987 78889999998764 22245688999999999999999999999988 889999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 79 FEYMDH-DLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred eccccc-cHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 999975 89888864 2357999999999999999999999998 9999999999999999999999999987654432
Q ss_pred ----ccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc------------c---
Q 010340 228 ----SYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM------------D--- 287 (512)
Q Consensus 228 ----~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~------------~--- 287 (512)
...++..|+|||.+.+ ..++.++||||||+++|||+||+.|+.......... .+.... .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE-KIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCchhhccccccchh
Confidence 2345778999998765 457899999999999999999997765322110000 000000 0
Q ss_pred -cc--cCCC--------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 288 -SH--LEGN--------FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 288 -~~--~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.. .... +...++..+.+++.+||..+|.+||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 0000 011125678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=301.08 Aligned_cols=250 Identities=20% Similarity=0.255 Sum_probs=197.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
+.+.+.||.|+||.||++....+..+++.||+|++..... ...+.+.+|+.++..+ +|+||+++++.+..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 4567788999999999999865444788899999875432 1235688999999999 6999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLS--QRERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999997 3456889999999999999999999999 999999999999999999999999998765332
Q ss_pred -----CccccCcccCCcccccCC--CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 227 -----KSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
....++..|+|||.+.+. .++.++||||||+++|+|++|..|+...... .....+...+.. ....++...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISRRILK-SEPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHHHhhc-cCCCCCccCC
Confidence 134578899999998753 4678999999999999999999876421100 000001111100 1122344456
Q ss_pred HHHHHHHHHhhccCCCCCC-----ChHHHHHH
Q 010340 300 TVVFDLASRCLQYEPRERP-----NTKDLVST 326 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rp-----s~~~vl~~ 326 (512)
..+.+++.+||+.||++|| ++.+++.+
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 7788999999999999997 67777765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=314.65 Aligned_cols=193 Identities=25% Similarity=0.293 Sum_probs=168.5
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCC------eeEEE
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD------ERLLV 148 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~lv 148 (512)
..||+|+||.||+|+++. +|+.||||.++.... ...+...+|+++|++|+|+|||+++++=++.. ...+|
T Consensus 19 e~LG~Ga~g~V~rgrnke---tG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKE---TGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred hhhcCCccceeeeecccc---cccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 346999999999999988 899999999987543 33567899999999999999999999865543 56899
Q ss_pred EEccCCCCHHhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee--cCCC--CCeeecccCcccc
Q 010340 149 AEYMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF--DENG--DPRLSCFGLMKNS 223 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~--~~kl~Dfg~a~~~ 223 (512)
||||.||+|...|...++ ..|++.+.+.++.+++.||.|||+++ |+||||||.||++ +.+| ..||+|||.|+..
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 999999999999986433 56999999999999999999999999 9999999999998 3434 4799999999988
Q ss_pred CCCC---ccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChh
Q 010340 224 RDGK---SYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSH 272 (512)
Q Consensus 224 ~~~~---~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~ 272 (512)
.+.. +.+||..|.+||++.. +.|+..+|.|||||++|++.||..||...
T Consensus 175 ~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 175 DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 7754 5689999999999984 77999999999999999999999987543
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=301.25 Aligned_cols=252 Identities=20% Similarity=0.241 Sum_probs=199.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
+.+++.||.|+||.||++.......+++.||||++..... ...+.+.+|+.++.++ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 4467788999999999998765444678899999875322 1235688999999999 6999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++|+|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999986 3457899999999999999999999998 999999999999999999999999998754332
Q ss_pred C-----ccccCcccCCcccccCCC--CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccch-hhhcccccCCCCCHHH
Q 010340 227 K-----SYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI-LHLMDSHLEGNFSSEE 298 (512)
Q Consensus 227 ~-----~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 298 (512)
. ...++..|++||.+.+.. .+.++||||||+++|+|++|..|+........ ...+ ..... .....+...
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~ 235 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS-QSEISRRILK--SKPPFPKTM 235 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch-HHHHHHHHHc--cCCCCCccc
Confidence 1 235788999999987655 78899999999999999999987642210000 0000 01111 112234445
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+..+.+++.+||+.||++|||+.++.+.|..
T Consensus 236 ~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 236 SAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred CHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 5678899999999999999998877666554
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=304.15 Aligned_cols=252 Identities=19% Similarity=0.247 Sum_probs=193.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeC--CeeE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERL 146 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 146 (512)
+.+++.||+|+||.||+|....+. +++.||||.+.... ....+.+.+|+.++..++||||+++++++.+. ...+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~-~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGK-DGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCC-CCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 456788999999999999987632 46789999998743 22245788999999999999999999999988 8899
Q ss_pred EEEEccCCCCHHhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC----CCCCeeecccC
Q 010340 147 LVAEYMPNDTLAKHLFHW---ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE----NGDPRLSCFGL 219 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfg~ 219 (512)
+||||+++ +|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++. ++.+||+|||+
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 99999975 677766432 2236899999999999999999999999 999999999999999 99999999999
Q ss_pred ccccCCC-------CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHH--------Hhcc---
Q 010340 220 MKNSRDG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDM--------IRGK--- 280 (512)
Q Consensus 220 a~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~--------~~~~--- 280 (512)
+...... ....++..|+|||++.+. .++.++|||||||++|+|++|+.|+....... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 8764322 234568889999988764 57899999999999999999997764321110 0000
Q ss_pred ------------------chhhhcccccCCCCC-----H------HHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 281 ------------------NILHLMDSHLEGNFS-----S------EEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 281 ------------------~~~~~~~~~~~~~~~-----~------~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.............++ . ..+..+.+++.+||+.||++|||+.+++++
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000000000111 0 233468899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=300.55 Aligned_cols=251 Identities=19% Similarity=0.256 Sum_probs=195.6
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
+.++.+++.||.|+||.||+|.+.. +++.||||.+....... ...+..|+.++... .||||++++++|.+....+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKK---TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECC---CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 3456678899999999999999986 68899999997654322 34567788777666 5999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+||||+.+ +|.+++.. ....+++..+..++.||+.||.|||+ .+ ++||||+|+||+++.++.+||+|||++.....
T Consensus 91 ~v~e~~~~-~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 91 ICMELMST-CLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred EEeeccCc-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 99999854 78777754 34579999999999999999999997 46 99999999999999999999999999876543
Q ss_pred C---CccccCcccCCcccccCCC----CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc-CCCCCHH
Q 010340 226 G---KSYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL-EGNFSSE 297 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 297 (512)
. ....++..|+|||.+.+.. ++.++||||||+++|+|++|+.|+........ .......... .......
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 244 (296)
T cd06618 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE---VLTKILQEEPPSLPPNEG 244 (296)
T ss_pred CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH---HHHHHhcCCCCCCCCCCC
Confidence 2 2234678899999987553 78899999999999999999988654211100 0111111110 0011123
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+..+.+|+.+||..||.+||++.+++.+..
T Consensus 245 ~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 245 FSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 4567899999999999999999999998854
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=306.53 Aligned_cols=251 Identities=17% Similarity=0.228 Sum_probs=195.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEee----CCee
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDER 145 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 145 (512)
+.+.+.||.|+||.||+|.... +++.||+|++..... .....+.+|+.+|+.++||||+++++++.. ....
T Consensus 7 y~~~~~lg~g~~g~v~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 7 YKPIENIGSGAYGVVCSAIDTR---SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred eeeeeeeecCCCeEEEEEEEcC---CCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 4466778999999999999987 788999999876432 234567889999999999999999998753 3568
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 84 YVVMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSS 159 (334)
T ss_pred EEEEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence 99999995 58999886 4456999999999999999999999999 99999999999999999999999999875432
Q ss_pred C--------CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-------Hhcc---------
Q 010340 226 G--------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-------IRGK--------- 280 (512)
Q Consensus 226 ~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-------~~~~--------- 280 (512)
. ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~ 239 (334)
T cd07855 160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRI 239 (334)
T ss_pred cCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhh
Confidence 1 13467889999999865 458899999999999999999998875421100 0000
Q ss_pred ---chhhhccc-ccCCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 281 ---NILHLMDS-HLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 281 ---~~~~~~~~-~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+...... ...... .+..+..+.++|.+||+.+|.+|||+.+++.+..-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~ 297 (334)
T cd07855 240 GSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297 (334)
T ss_pred chhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence 00000000 000111 12346778999999999999999999999997554
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=300.26 Aligned_cols=248 Identities=22% Similarity=0.279 Sum_probs=198.0
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+++.||.|++|.||++.... +++.+++|.+...... ....+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKL---TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred ccceeeecCCCceEEEEEcCC---CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence 466788999999999999876 7888999998765433 24578899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++ +|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~-~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~ 155 (283)
T cd05118 79 FMDT-DLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPY 155 (283)
T ss_pred ccCC-CHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccc
Confidence 9975 88888864 3367999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc-------hhhhcccc---------
Q 010340 228 -SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN-------ILHLMDSH--------- 289 (512)
Q Consensus 228 -~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-------~~~~~~~~--------- 289 (512)
...++..|+|||.+.+. .++.++||||||+++|+|+||+.|+............ ....+...
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF 235 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhh
Confidence 34567889999999776 6899999999999999999999776532111000000 00000000
Q ss_pred -c-------CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 290 -L-------EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 290 -~-------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. .....+..+..+.++|.+||+.||.+||++.+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 236 SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 001123456779999999999999999999999876
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=296.40 Aligned_cols=248 Identities=21% Similarity=0.253 Sum_probs=193.8
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcC---CCCCccceEEEEeeCCe---
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKL---RHKRLANLIGYCCDGDE--- 144 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~--- 144 (512)
.+++.||.|+||.||+|.+.. +++.||+|++......+ ...+.+|+.++.++ +||||+++++++.....
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLN---TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred eEEEEecccCceEEEEEEECC---CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 456788999999999999986 68889999997543322 24567788877666 59999999999988776
Q ss_pred --eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 145 --RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 145 --~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
.+++|||+.+ +|.+++.......+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..
T Consensus 79 ~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 79 LKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred ceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCccee
Confidence 9999999975 8999887544456999999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCC---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh--------------
Q 010340 223 SRDGK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL-------------- 285 (512)
Q Consensus 223 ~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~-------------- 285 (512)
..... ...++..|+|||++.+..++.++|||||||++|+|++|..|+........ ...+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 157 YSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ-LDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred ccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH-HHHHHHHcCCCChHhcCCCcc
Confidence 54322 33467889999999988899999999999999999999866543211110 0000000
Q ss_pred -----cccccC---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 286 -----MDSHLE---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 286 -----~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...... ....+..+..+.+++.+||+.||.+||++.+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000000 01112345678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=282.15 Aligned_cols=245 Identities=21% Similarity=0.193 Sum_probs=197.1
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||+|+|+.|-.++... +++.||||++.+.......++.+|++++.+. .|+||++++++|+++..+|||||-|.||
T Consensus 85 ~LGeGAyasVqtcv~i~---t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG 161 (463)
T KOG0607|consen 85 LLGEGAYASVQTCVSIQ---TGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG 161 (463)
T ss_pred HhcCccceeeeeeeeec---cchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence 46999999999999887 8899999999988777788999999999999 6999999999999999999999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC---CCeeecccCccccCC-------
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLMKNSRD------- 225 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg~a~~~~~------- 225 (512)
+|..+|+ +...+++.++.++..+|+.||.|||.+| |.||||||+|||..... -+|||||.+......
T Consensus 162 plLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 162 PLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred hHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 9999997 5677999999999999999999999999 99999999999986544 489999987643221
Q ss_pred ----CCccccCcccCCccccc---C--CCCCCCCcEEehHHHHHHHHhCCCCCChhhHH--HHhccc-----hhhhcccc
Q 010340 226 ----GKSYSTNLAYTPPEYLR---N--GRVTPESVIFSFGTVLLDLLSGKHIPPSHALD--MIRGKN-----ILHLMDSH 289 (512)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~---~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~--~~~~~~-----~~~~~~~~ 289 (512)
-.+.+|+..|||||++. + ..|+.++|.||||||||-||+|.+||.+.... -|..+. ...++..+
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI 318 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 318 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH
Confidence 12346777899999862 2 34899999999999999999999887643110 011100 01111111
Q ss_pred cCC--CCC----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 290 LEG--NFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 290 ~~~--~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..+ ++| ...+.+..+++..+|..++.+|.++..++++-
T Consensus 319 QEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 319 QEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred hccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 111 233 34577789999999999999999998888763
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=301.50 Aligned_cols=243 Identities=19% Similarity=0.224 Sum_probs=189.0
Q ss_pred CCCeEEEEEEcCCCCCceEEEEEecCccC--CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCCCHHh
Q 010340 82 APNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAK 159 (512)
Q Consensus 82 ~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~ 159 (512)
++|.||.++... +++.||||++.... ....+.+.+|+.+++.++|+||+++++++...+..+++|||+++|+|.+
T Consensus 12 ~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 12 DLMIVHLAKHKP---TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred CCceEEEEEecC---CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 455666666665 78889999997652 2234679999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-----------Cc
Q 010340 160 HLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-----------KS 228 (512)
Q Consensus 160 ~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-----------~~ 228 (512)
++.......+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||.+...... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
T cd08216 89 LLKTHFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKS 167 (314)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeecccccccccccccccc
Confidence 997655567899999999999999999999999 999999999999999999999999987643221 12
Q ss_pred cccCcccCCcccccCC--CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc----cchhhhcc---------------
Q 010340 229 YSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG----KNILHLMD--------------- 287 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~----~~~~~~~~--------------- 287 (512)
..++..|+|||++.+. .++.++|||||||++|||++|..||.......... .....++.
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
T cd08216 168 SVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSR 247 (314)
T ss_pred ccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccc
Confidence 3457789999998653 48899999999999999999998765321110000 00000000
Q ss_pred -----c----ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 288 -----S----HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 288 -----~----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
. ..........+..+.+|+.+||..||++|||+.+++++-.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 248 SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 0 0001112344567889999999999999999999998754
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=300.22 Aligned_cols=244 Identities=21% Similarity=0.259 Sum_probs=201.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 146 (512)
+|.+.+.||.|+||.||++.... +++.||+|++....... ...+.+|+.++++++ ||||+++++++...+..+
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 78 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKE---TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLY 78 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcC---CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEE
Confidence 45677889999999999999987 78899999997643222 356889999999998 999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 79 lv~e~~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 79 FVLEYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999999997 3457999999999999999999999999 999999999999999999999999988754322
Q ss_pred C------------------------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccch
Q 010340 227 K------------------------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI 282 (512)
Q Consensus 227 ~------------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~ 282 (512)
. ...++..|+|||++.+..++.++||||||++++++++|+.|+....... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~ 231 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----TF 231 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH----HH
Confidence 1 2346788999999988889999999999999999999998765332111 01
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCCh----HHHHHH
Q 010340 283 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT----KDLVST 326 (512)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~----~~vl~~ 326 (512)
.... .....++...++.+.+++.+||+.+|.+||++ .+++++
T Consensus 232 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 232 QKIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1111 11223444556778899999999999999999 888775
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=305.11 Aligned_cols=247 Identities=21% Similarity=0.281 Sum_probs=191.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcC-CCCCccceEEEEeeC--CeeE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKL-RHKRLANLIGYCCDG--DERL 146 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~~ 146 (512)
+.+.+.||.|+||.||+|.+.. +++.||||++..... .....+.+|+.++.++ +||||++++++|... ...+
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRR---TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcC---CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 4466788999999999999876 678899999865321 2234677899999999 999999999998653 4689
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||++ ++|.+++.. ..+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 86 lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 86 LVFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 9999997 499998853 37899999999999999999999998 999999999999999999999999998754322
Q ss_pred ---------CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-----------------
Q 010340 227 ---------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG----------------- 279 (512)
Q Consensus 227 ---------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~----------------- 279 (512)
....++..|+|||.+.+ ..++.++|||||||++|+|+||+.|+..........
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd07852 161 EENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESI 240 (337)
T ss_pred cccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHH
Confidence 13457889999998865 457889999999999999999998765321100000
Q ss_pred --cchhhhccccc---C---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 280 --KNILHLMDSHL---E---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 280 --~~~~~~~~~~~---~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.....++.... . ....+..+..+.+++.+||+.||.+|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 241 KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000000 0 00111245678899999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=306.49 Aligned_cols=249 Identities=21% Similarity=0.272 Sum_probs=198.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC--CCChhHHHHHHHHHhcCCCCCccceEEEEeeCC-----e
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-----E 144 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 144 (512)
+.+.+.||.|+||.||+|.... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.... .
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKR---TGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCC---CCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccc
Confidence 4567889999999999999876 68889999998654 223467999999999999999999999998765 7
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+++ +|.+++. ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||++....
T Consensus 79 ~~lv~e~~~~-~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 79 VYIVTELMET-DLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred eEEEecchhh-hHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 8999999974 8999886 4458999999999999999999999999 9999999999999999999999999987654
Q ss_pred CCC-------ccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh------------------
Q 010340 225 DGK-------SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR------------------ 278 (512)
Q Consensus 225 ~~~-------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~------------------ 278 (512)
... ...++..|+|||++.+. .++.++||||||+++|+|++|+.||.........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 332 34568889999999887 7899999999999999999999876543211000
Q ss_pred -ccchhhhccc-ccCC-----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 279 -GKNILHLMDS-HLEG-----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 279 -~~~~~~~~~~-~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.......+.. .... ...+..+..+.+++.+||+.+|.+||++.+++.+-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 0000000000 0000 01122456788999999999999999999999873
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=297.73 Aligned_cols=249 Identities=18% Similarity=0.278 Sum_probs=195.1
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+++.||.|+||.||+|.... +++.|+||++...... +.....+|+..+.+++ |+||+++++++..++..++|||
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKE---TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred eeheeeccCCceEEEEEEECC---CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 466788999999999999987 6788999998765432 2234567999999998 9999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---C
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---K 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~ 227 (512)
|+ +|+|.+++.......+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 156 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYT 156 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcC
Confidence 99 789999987544457899999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-----------------cchhhhcccc
Q 010340 228 SYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-----------------KNILHLMDSH 289 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-----------------~~~~~~~~~~ 289 (512)
...++..|+|||++.+ ..++.++|+||||++++||++|+.|++......... ......+...
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07830 157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236 (283)
T ss_pred CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence 3457889999998854 457899999999999999999997764321110000 0000000000
Q ss_pred cC----C---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 290 LE----G---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 290 ~~----~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.. . ...+..+..+.+++.+||+.+|++|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00 0 0011124668899999999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=303.89 Aligned_cols=246 Identities=20% Similarity=0.196 Sum_probs=192.1
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--------------hhHHHHHHHHHhcCCCCCccceEEEEee
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------------PKQFADEAWGVGKLRHKRLANLIGYCCD 141 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~~~~~ 141 (512)
+.||.|+||.||+|.+.. +++.||||++....... ...+.+|+++++.++||||+++++++..
T Consensus 15 ~~ig~G~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 91 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTL---TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE 91 (335)
T ss_pred hcccCCCceeEEEEEECC---CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec
Confidence 458999999999999876 78889999987543322 1247889999999999999999999999
Q ss_pred CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.+..++||||+. |+|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 92 ~~~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~ 167 (335)
T PTZ00024 92 GDFINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLAR 167 (335)
T ss_pred CCcEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCcccee
Confidence 999999999997 58999986 4556899999999999999999999999 9999999999999999999999999886
Q ss_pred ccCC------------------CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccch
Q 010340 222 NSRD------------------GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI 282 (512)
Q Consensus 222 ~~~~------------------~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~ 282 (512)
.... .....++..|+|||++.+.. ++.++|||||||++|+|++|..|+......... ..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-~~i 246 (335)
T PTZ00024 168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL-GRI 246 (335)
T ss_pred ecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHH
Confidence 5431 01223577899999987644 688999999999999999999776533211100 000
Q ss_pred hhhcccc--------------------cCC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 283 LHLMDSH--------------------LEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 283 ~~~~~~~--------------------~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
....... ... ......+..+.+++.+||+.+|++|||+.+++.+-.-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~ 316 (335)
T PTZ00024 247 FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316 (335)
T ss_pred HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence 0000000 000 0011235668899999999999999999999987554
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=304.90 Aligned_cols=261 Identities=17% Similarity=0.217 Sum_probs=197.4
Q ss_pred cCHHHHHHHhcC-CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCcc
Q 010340 57 FSLADLRAATNN-FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLA 133 (512)
Q Consensus 57 ~~~~~~~~~~~~-f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv 133 (512)
|+.+|+...+.. ...+.+++.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.+++.++||||+
T Consensus 1 ~~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 77 (342)
T cd07879 1 FYREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKR---TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVI 77 (342)
T ss_pred CchhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCC---CCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCcc
Confidence 344555555422 3345577889999999999999876 7888999998754322 234688999999999999999
Q ss_pred ceEEEEeeC------CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec
Q 010340 134 NLIGYCCDG------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 134 ~l~~~~~~~------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~ 207 (512)
++++++... ...++||||+.. +|..++. ..+++..+..++.|++.||.|||+.+ ++||||||+|||++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~ 151 (342)
T cd07879 78 GLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVN 151 (342)
T ss_pred chhheecccccCCCCceEEEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEC
Confidence 999998754 246899999964 7776652 36899999999999999999999999 99999999999999
Q ss_pred CCCCCeeecccCccccCCC-CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-Hh------
Q 010340 208 ENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-IR------ 278 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-~~------ 278 (512)
.++.+||+|||+++..... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..
T Consensus 152 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 231 (342)
T cd07879 152 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 231 (342)
T ss_pred CCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 9999999999998765432 23467888999999876 458899999999999999999998875431100 00
Q ss_pred ------------ccchhhh---cccccCCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 279 ------------GKNILHL---MDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 279 ------------~~~~~~~---~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
....... ........+ .+..+..+.+||.+||+.||.+||++.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 232 GVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred CCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 000000000 01234568899999999999999999999987
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=322.72 Aligned_cols=243 Identities=20% Similarity=0.220 Sum_probs=182.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeC--------
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDG-------- 142 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 142 (512)
...+..||+||||.||+++++- +|+.||||++..... ..-..+.+|+++|.+|+|||||+++..|.+.
T Consensus 481 FEEL~lLGkGGFG~VvkVRNKl---DGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 481 FEELELLGKGGFGSVVKVRNKL---DGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hHHHHHhcCCCCceEEEEeecc---cchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 3356677999999999999998 899999999986641 1134688999999999999999998542110
Q ss_pred --------------------------------------------------------------------------------
Q 010340 143 -------------------------------------------------------------------------------- 142 (512)
Q Consensus 143 -------------------------------------------------------------------------------- 142 (512)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CeeEEEEEccCCCCHHhhhhhcCCCCC-CHHHHHHHHHHHHHHHHHHhc
Q 010340 143 -------------------------------DERLLVAEYMPNDTLAKHLFHWENQTI-EWAMRLRVALYIAEALDYCSS 190 (512)
Q Consensus 143 -------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~~l-~~~~~~~i~~~i~~~L~~LH~ 190 (512)
-.+||-||||+..+|.+++.. +... .....++++++|++||.|+|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhHHHHHHHHHHHHHHHHHHh
Confidence 025788999999888888753 2222 467789999999999999999
Q ss_pred CCCccccccCccceeecCCCCCeeecccCccccC----------------------CCCccccCcccCCcccccCCC---
Q 010340 191 EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----------------------DGKSYSTNLAYTPPEYLRNGR--- 245 (512)
Q Consensus 191 ~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~----------------------~~~~~~~t~~y~aPE~~~~~~--- 245 (512)
.| +|||||||.||+++.++.+||+|||+|.... +.+..+||..|+|||++.+..
T Consensus 716 ~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 716 QG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred Cc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 99 9999999999999999999999999997621 113457899999999997654
Q ss_pred CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC--CCHHHHHHHHHHHHHhhccCCCCCCChHHH
Q 010340 246 VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN--FSSEEATVVFDLASRCLQYEPRERPNTKDL 323 (512)
Q Consensus 246 ~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~v 323 (512)
|+.|+|+||||||++||+.- |...-.. ...+..+-+..+..+ +.....+.-..+|.+++++||.+|||+.++
T Consensus 795 Yn~KiDmYSLGIVlFEM~yP---F~TsMER---a~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eL 868 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLYP---FGTSMER---ASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATEL 868 (1351)
T ss_pred ccchhhhHHHHHHHHHHhcc---CCchHHH---HHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHH
Confidence 99999999999999999843 3332111 111111111111111 122223334589999999999999999999
Q ss_pred HHH
Q 010340 324 VST 326 (512)
Q Consensus 324 l~~ 326 (512)
|+.
T Consensus 869 L~s 871 (1351)
T KOG1035|consen 869 LNS 871 (1351)
T ss_pred hhc
Confidence 874
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=298.73 Aligned_cols=249 Identities=24% Similarity=0.279 Sum_probs=191.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCC-----
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGD----- 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 143 (512)
.+.+.+.||.|+||.||+|.... +++.||||+++..... ....+.+|+.+++.++||||+++++++.+..
T Consensus 8 ~~~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 8 KFDIIGQIGEGTYGQVYKARDKD---TGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhheeeeecccCCEEEEEEEECC---CCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 34467788999999999999987 6788999999754322 2356788999999999999999999987654
Q ss_pred -----eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeeccc
Q 010340 144 -----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (512)
Q Consensus 144 -----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 218 (512)
.+++||||+++ +|...+.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCccc
Confidence 78999999986 77777753 2457899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCC-----ccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc---
Q 010340 219 LMKNSRDGK-----SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH--- 289 (512)
Q Consensus 219 ~a~~~~~~~-----~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~--- 289 (512)
++....... ...++..|+|||++.+. .++.++|||||||++|||++|+.|+...... .....+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~ 240 (302)
T cd07864 162 LARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELISRLCGSPCPA 240 (302)
T ss_pred ccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChh
Confidence 987654322 22457789999988653 4788999999999999999998766432110 0000000000000
Q ss_pred -------------------cCC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 290 -------------------LEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 290 -------------------~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
... ......+..+.+++.+||..+|.+|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred hcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 0011235678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=306.19 Aligned_cols=248 Identities=17% Similarity=0.180 Sum_probs=191.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeC--------
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG-------- 142 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 142 (512)
.+.+++.||.|+||.||+|.... +++.||+|.+........+.+.+|+++++.++||||+++++++...
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~---~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSD---CDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECC---CCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 45678889999999999999987 7889999998766555567789999999999999999999876543
Q ss_pred ------CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec-CCCCCeee
Q 010340 143 ------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLS 215 (512)
Q Consensus 143 ------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~ 215 (512)
...++||||++ ++|.+++. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++ .++.+||+
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEEC
Confidence 35789999997 58988884 356899999999999999999999999 99999999999997 45678999
Q ss_pred cccCccccCCC-------CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc-------
Q 010340 216 CFGLMKNSRDG-------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK------- 280 (512)
Q Consensus 216 Dfg~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------- 280 (512)
|||++...... ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99998754321 12346788999998754 4578899999999999999999988753211000000
Q ss_pred -------c----hhhhcc-cccCCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 281 -------N----ILHLMD-SHLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 281 -------~----~~~~~~-~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. ...... ....... .+..+..+.+|+.+||..||.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0 000000 0000001 11234668899999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=291.86 Aligned_cols=245 Identities=16% Similarity=0.208 Sum_probs=194.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-----CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-----PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
|.+.+.||.|+||.||++.+.. .+..+++|+++.... ....++.+|+.+++.++||||+++++++.+....+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKK---AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFC 78 (260)
T ss_pred ceeeeeecCCCCceEEEEEecC---CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceE
Confidence 4566789999999999999876 344455555543221 12345778999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 147 LVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
+||||+++++|.+++.. .....+++..++.++.|++.||.|||+.+ ++|+||||+||+++. +.++|+|||++....
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999998863 23467999999999999999999999998 999999999999975 569999999987653
Q ss_pred CC----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 225 DG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 225 ~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
.. ....+++.|+|||.+.+..++.++|+||||+++|+|++|..|+........ ..... .......+...+.
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~ 231 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSV----VLRIV-EGPTPSLPETYSR 231 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHH-cCCCCCCcchhcH
Confidence 32 234578899999999888899999999999999999999987643211111 11111 1122233455667
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+.+++.+||..+|++||++.+++++
T Consensus 232 ~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 232 QLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 88999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=288.82 Aligned_cols=237 Identities=23% Similarity=0.267 Sum_probs=196.4
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
||.|+||.||++.... +++.||+|++....... ...+..|+.+++.++||||+++++.+..+...++||||+++
T Consensus 1 lg~G~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 77 (250)
T cd05123 1 LGKGSFGKVLLVRKKD---TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPG 77 (250)
T ss_pred CCCCCceEEEEEEECC---CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCC
Confidence 5999999999999876 67889999988654432 34789999999999999999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----Cccc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYS 230 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~ 230 (512)
++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 78 ~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 78 GELFSHLS--KEGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99999996 3446899999999999999999999998 999999999999999999999999998765432 3456
Q ss_pred cCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhh
Q 010340 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310 (512)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 310 (512)
++..|++||.+.+...+.++|+||||+++|+|++|..|+........ ...+.. ....++...+..+.+++.+||
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~--~~~~~~~~~~~~l~~~i~~~l 228 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEI----YEKILK--DPLRFPEFLSPEARDLISGLL 228 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHhc--CCCCCCCCCCHHHHHHHHHHh
Confidence 78899999999888889999999999999999999987643321111 111111 122344445677889999999
Q ss_pred ccCCCCCCCh---HHHHHH
Q 010340 311 QYEPRERPNT---KDLVST 326 (512)
Q Consensus 311 ~~~p~~Rps~---~~vl~~ 326 (512)
..||++||++ .+++++
T Consensus 229 ~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 229 QKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred cCCHhhCCCcccHHHHHhC
Confidence 9999999999 566554
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=297.11 Aligned_cols=248 Identities=22% Similarity=0.294 Sum_probs=193.7
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEee-CCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 148 (512)
|.+++.||.|+||.||++.... +++.||||++...... ..+.+.+|++++..++||||++++++|.. ....++|
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv 88 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQL---TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFV 88 (328)
T ss_pred eEEEEeecccCCeEEEEEEECC---CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEE
Confidence 4467888999999999999887 7888999998653322 24578899999999999999999999875 5678999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-C
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-K 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~ 227 (512)
|||+ +++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... .
T Consensus 89 ~e~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 163 (328)
T cd07856 89 TELL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMT 163 (328)
T ss_pred eehh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcC
Confidence 9998 568998884 456888899999999999999999999 999999999999999999999999998754432 3
Q ss_pred ccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-------Hhc------------cchhhhcc
Q 010340 228 SYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-------IRG------------KNILHLMD 287 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-------~~~------------~~~~~~~~ 287 (512)
...++..|+|||++.+ ..++.++|||||||++|+|+||+.||....... ..+ ......+.
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (328)
T cd07856 164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ 243 (328)
T ss_pred CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence 3457888999999866 568999999999999999999997765321100 000 00000000
Q ss_pred cc-cCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 288 SH-LEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 288 ~~-~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.. .....+ +..+..+.++|.+||+.+|++|||+.+++.+-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 00 001111 12356788999999999999999999998873
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=293.26 Aligned_cols=247 Identities=22% Similarity=0.267 Sum_probs=195.3
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+++.||+|+||.||+|.... +++.||+|++..... ...+.+..|+.+++.++|+||+++++++.+.+..++||||
T Consensus 3 ~~~~ig~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 3 KLEKLGEGTYGVVYKARDKK---TGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred eehcccccCcceEEEeeecC---CCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 45778999999999999987 788999999987642 2245788999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC----
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---- 227 (512)
++ ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~l~~~i~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (282)
T cd07829 80 CD-MDLKKYLDK-RPGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYT 156 (282)
T ss_pred cC-cCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccC
Confidence 97 589999964 2257999999999999999999999999 9999999999999999999999999987654322
Q ss_pred ccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-----------------cch---hhhc
Q 010340 228 SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-----------------KNI---LHLM 286 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-----------------~~~---~~~~ 286 (512)
...++..|+|||.+.+. .++.++|||||||++|||++|+.|+.......... ... ....
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07829 157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF 236 (282)
T ss_pred ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence 23456789999998776 78999999999999999999987664332110000 000 0000
Q ss_pred ccccCC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 287 DSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 287 ~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...... ...+..+..+.+++.+||..+|++||++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 000000 0011225678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=324.32 Aligned_cols=147 Identities=24% Similarity=0.266 Sum_probs=132.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+..|.+++.||.|+||.||+|.+.. +++.||||++....... ...+.+|+.++..++||||+++++++.....+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 79 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKN---NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNV 79 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEE
Confidence 3567788999999999999999987 78889999997654332 25688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
+|||||+.|++|.+++. ..+.+++..++.|+.||+.||.|||..+ |+||||||+|||++.++.+||+|||+++
T Consensus 80 ~lVmEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 80 YLVMEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999999996 3456899999999999999999999998 9999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=302.31 Aligned_cols=248 Identities=16% Similarity=0.228 Sum_probs=193.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCC-----
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD----- 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 143 (512)
.|.+++.||.|+||.||++.... +++.||||++....... .+.+.+|+.+|+.++||||+++++++....
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECC---CCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 45678899999999999999877 78899999986543222 346889999999999999999999987643
Q ss_pred -eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 144 -ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 144 -~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
..++||||+ +++|.+++. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++..
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred ceEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 458999999 779998884 457999999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC-CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH-----h--ccc------------
Q 010340 223 SRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI-----R--GKN------------ 281 (512)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-----~--~~~------------ 281 (512)
.... ....+++.|++||++.+ ..++.++|+|||||++|+|++|+.||........ . ...
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07880 168 TDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED 247 (343)
T ss_pred cccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence 5433 23467889999999876 3588899999999999999999987653211000 0 000
Q ss_pred hhhh---cccccCC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 282 ILHL---MDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 282 ~~~~---~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.... +...... ......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000000 0112334568899999999999999999999976
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=278.73 Aligned_cols=256 Identities=21% Similarity=0.251 Sum_probs=196.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEee------
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCD------ 141 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 141 (512)
+.|..+.+||+|.||.||+++.+. +++.||+|++..... .-.....+|+++|..|+|+|++.++..|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n---~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKN---TGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcC---ccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 345567788999999999999988 788899988764322 224678899999999999999999998854
Q ss_pred --CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 142 --GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 142 --~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
...++|||.+|+. +|..+|.+ ....++..++.+++.++..||.|+|++. |+|||+|+.|+||+.+|.+||+|||+
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeecccc
Confidence 2358999999987 89998854 4467999999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCC--------ccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHH-------Hhccchh
Q 010340 220 MKNSRDGK--------SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDM-------IRGKNIL 283 (512)
Q Consensus 220 a~~~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-------~~~~~~~ 283 (512)
++.+.... ..+.|..|.+||.+.|.. |+++.|||..|||+.||+||.+.+....... .-+....
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 97654322 224589999999998854 9999999999999999999997654331110 0000000
Q ss_pred ---------hhcccccCCCCC-------HH------HHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 284 ---------HLMDSHLEGNFS-------SE------EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 284 ---------~~~~~~~~~~~~-------~~------~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.++...-.++.+ .+ ......+|+.++|..||.+|+++++++.|-....
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 000000000011 01 1135779999999999999999999999876544
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=286.59 Aligned_cols=219 Identities=22% Similarity=0.255 Sum_probs=179.6
Q ss_pred CCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCCCHHhh
Q 010340 81 KAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160 (512)
Q Consensus 81 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~ 160 (512)
|.||.||++.+.. +++.||+|++.... .+.+|...+....||||+++++++.+....++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~---~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTR---TQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEcc---CCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 7899999999987 78899999997643 234455556666799999999999999999999999999999999
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-CccccCcccCCcc
Q 010340 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPE 239 (512)
Q Consensus 161 l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE 239 (512)
+.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||.+...... ....++..|+|||
T Consensus 76 l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE 152 (237)
T cd05576 76 ISK--FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE 152 (237)
T ss_pred HHH--hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence 863 346899999999999999999999999 999999999999999999999999987654432 2344567899999
Q ss_pred cccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 010340 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN 319 (512)
Q Consensus 240 ~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps 319 (512)
.+.+..++.++||||+||++|||++|..|+...... .........+...++.+.+++.+||+.||++||+
T Consensus 153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~ 222 (237)
T cd05576 153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLG 222 (237)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCcccCCHHHHHHHHHHccCCHHHhcC
Confidence 998888999999999999999999998664321110 0001111234445667889999999999999999
Q ss_pred h
Q 010340 320 T 320 (512)
Q Consensus 320 ~ 320 (512)
+
T Consensus 223 ~ 223 (237)
T cd05576 223 A 223 (237)
T ss_pred C
Confidence 6
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=301.43 Aligned_cols=258 Identities=18% Similarity=0.229 Sum_probs=196.5
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEE
Q 010340 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIG 137 (512)
Q Consensus 60 ~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~ 137 (512)
.++...+++ |.+++.||+|+||.||++.+.. +++.||||++...... ..+.+.+|+.++.+++||||+++++
T Consensus 10 ~~~~~~~~~---y~~~~~lg~G~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~ 83 (345)
T cd07877 10 KTIWEVPER---YQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83 (345)
T ss_pred HHHhhccCc---eEEEEEeeecCCeEEEEEEEcC---CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence 334444444 4477888999999999999876 7889999998754322 2356888999999999999999999
Q ss_pred EEeeC------CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 138 YCCDG------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 138 ~~~~~------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
++... ...+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred eeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCC
Confidence 88643 3467888887 789998884 346899999999999999999999999 999999999999999999
Q ss_pred CeeecccCccccCCC-CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH-h------ccc-
Q 010340 212 PRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI-R------GKN- 281 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-~------~~~- 281 (512)
+||+|||++...... ....++..|+|||++.+ ..++.++|||||||++|+|++|+.|+........ . ...
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (345)
T cd07877 159 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238 (345)
T ss_pred EEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999999998765443 23567889999999866 4688899999999999999999987653211000 0 000
Q ss_pred --------------hhhhcccccCCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 282 --------------ILHLMDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 282 --------------~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
............+ ....++.+.++|.+||+.||.+||++.+++.+-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 0000000000000 0113456889999999999999999999998843
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=297.75 Aligned_cols=250 Identities=23% Similarity=0.280 Sum_probs=190.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeC-----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 142 (512)
.++.+++.||.|+||.||+|.+.. +++.||||++......+ ...+.+|+++++.++||||+++++++...
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIK---TGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECC---CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 456688889999999999999887 77889999987543322 34678899999999999999999987543
Q ss_pred ---CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 143 ---DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 143 ---~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
..+++||||+.+ +|...+.. ....+++..+..++.||++||.|||+.+ ++|+||||+||+++.++.++|+|||+
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCcc
Confidence 346999999975 67777753 3457999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCC---------------ccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchh
Q 010340 220 MKNSRDGK---------------SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 220 a~~~~~~~---------------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~ 283 (512)
+....... ...+++.|+|||.+.+. .++.++|||||||++|||++|+.|+........ ...+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~-~~~~~ 240 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ-LHLIF 240 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence 87543211 22457789999988654 488999999999999999999977543211100 00000
Q ss_pred ------------------hhcccccCCCCC-------HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 284 ------------------HLMDSHLEGNFS-------SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 284 ------------------~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...........+ ......+.+++.+||+.||.+|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000000000111 1122567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=288.36 Aligned_cols=248 Identities=22% Similarity=0.322 Sum_probs=198.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCcc-CCCCh------hHHHHHHHHHhcCCCCCccceEEEEe-eCC
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH-AWPDP------KQFADEAWGVGKLRHKRLANLIGYCC-DGD 143 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~------~~~~~E~~~l~~l~h~niv~l~~~~~-~~~ 143 (512)
|.++..||+|||+.||++.+.. ..++||||+-... .|.+. +...+|-++.+.|+||.||++|++|. +..
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~---EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLT---EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHhccccHHHHHHhcccc---hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 5567789999999999999987 7889999986532 23332 35788999999999999999999996 456
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeec---CCCCCeeecccC
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD---ENGDPRLSCFGL 219 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~---~~~~~kl~Dfg~ 219 (512)
.+|-|+|||+|.+|.-+|. ....+++.+++.|+.||+.||.||.+.. +|||-||||.|||+- .-|.+||.|||+
T Consensus 542 sFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 7899999999999999997 6678999999999999999999999865 699999999999994 457899999999
Q ss_pred ccccCCCC-----------ccccCcccCCcccccCC----CCCCCCcEEehHHHHHHHHhCCCCCChhhH--HHHhccch
Q 010340 220 MKNSRDGK-----------SYSTNLAYTPPEYLRNG----RVTPESVIFSFGTVLLDLLSGKHIPPSHAL--DMIRGKNI 282 (512)
Q Consensus 220 a~~~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~~l~elltg~~~~~~~~~--~~~~~~~~ 282 (512)
++.+.+.. ...||..|++||++.-+ ..+.+.||||+|||+|..+.|+.||-.... +......+
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI 699 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI 699 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence 98765432 34679999999998543 378899999999999999999998765422 22233333
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 283 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.....-.+ +..+.++.+...||++||++.-++|....++..+
T Consensus 700 lkAtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 700 LKATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred hcceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 32222111 1224566778999999999999999888777554
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=307.16 Aligned_cols=246 Identities=17% Similarity=0.209 Sum_probs=204.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEee-----CCee
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD-----GDER 145 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~~~~ 145 (512)
..++..||.|.+|.||+++.+. +++..|||++...... .++...|..+|+.. .|||++.++|+|.. ++.+
T Consensus 21 ~ei~evig~Gtygkv~k~k~~~---~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 21 FEIIEVIGNGTYGKVYKGRHVK---TGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred cEEEEEEeeccceeEEEEeeee---cCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 3467778999999999999998 8889999999876543 36788899999988 79999999999864 5789
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
|||||||.|||..+++++.....+.|..+..|++.++.||.+||.+. +||||||..|||++.++.+||+|||++.....
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQlds 175 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS 175 (953)
T ss_pred EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence 99999999999999998877889999999999999999999999998 99999999999999999999999999876544
Q ss_pred C----CccccCcccCCcccccC-----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc-ccCCCCC
Q 010340 226 G----KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS-HLEGNFS 295 (512)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 295 (512)
+ .+.+||+.|||||++.- ..|+..+|+||||++..||--|.+|+... .....+..+... ...-.-+
T Consensus 176 T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm----HPmraLF~IpRNPPPkLkrp 251 (953)
T KOG0587|consen 176 TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM----HPMRALFLIPRNPPPKLKRP 251 (953)
T ss_pred ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc----chhhhhccCCCCCCccccch
Confidence 3 46789999999999953 23788999999999999999998664321 111112222111 1111225
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...+..+.++|..||.+|-++||++.++++|
T Consensus 252 ~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 252 KKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred hhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 6678889999999999999999999999876
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=287.08 Aligned_cols=251 Identities=16% Similarity=0.162 Sum_probs=199.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC--CCC----ccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR--HKR----LANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~n----iv~l~~~~~~~~~ 144 (512)
.|.+++.+|+|.||.|-.+.+.. ++..||||+++.-... .+...-|+++|+++. -|+ +|.+.++|.-.++
T Consensus 90 Ry~i~~~lGeGtFGkV~ec~D~~---~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 90 RYEIVDLLGEGTFGKVVECWDRE---TKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ceehhhhhcCCcccceEEEeecC---CCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 56788899999999999999988 6788999999854322 356778999999993 233 7888899999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC----------------
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---------------- 208 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---------------- 208 (512)
.+||+|.+ |.|++++|..+.-.+++...++.++.|++++++|||+.+ ++|.||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCcccee
Confidence 99999999 669999998777788999999999999999999999999 999999999999832
Q ss_pred ----CCCCeeecccCccccCCC-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHH-------H
Q 010340 209 ----NGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD-------M 276 (512)
Q Consensus 209 ----~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~-------~ 276 (512)
+-.++|+|||.|...... ...+.|..|.|||++.+-.++.++||||+||||+|+.||..+|...... .
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMer 323 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMER 323 (415)
T ss_pred ccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHH
Confidence 235899999999876554 4667899999999999999999999999999999999999887654210 0
Q ss_pred Hhccchhhhcccc----------c-------CC--------CC--------CHHHHHHHHHHHHHhhccCCCCCCChHHH
Q 010340 277 IRGKNILHLMDSH----------L-------EG--------NF--------SSEEATVVFDLASRCLQYEPRERPNTKDL 323 (512)
Q Consensus 277 ~~~~~~~~~~~~~----------~-------~~--------~~--------~~~~~~~~~~li~~cl~~~p~~Rps~~~v 323 (512)
+.+.....++... + .. .. .......+.+|+++||..||.+|+|+.|+
T Consensus 324 IlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA 403 (415)
T KOG0671|consen 324 ILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA 403 (415)
T ss_pred hhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence 0000000000000 0 00 00 12233458999999999999999999999
Q ss_pred HHHh
Q 010340 324 VSTL 327 (512)
Q Consensus 324 l~~L 327 (512)
+.|-
T Consensus 404 L~Hp 407 (415)
T KOG0671|consen 404 LSHP 407 (415)
T ss_pred hcCH
Confidence 9874
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=298.07 Aligned_cols=250 Identities=19% Similarity=0.222 Sum_probs=189.8
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcC-CCCCccceEEEEeeC----Ce
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL-RHKRLANLIGYCCDG----DE 144 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 144 (512)
+.+.+.||+|+||.||++...... .++.||||++...... ..+.+.+|++++.++ +||||+++++++... ..
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETS-EEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCC-cCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 346778899999999999987621 2788999998753222 235688999999999 699999999976432 45
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.+++|||+. ++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 789999986 58999886 4567999999999999999999999999 9999999999999999999999999987543
Q ss_pred CC--------CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH------------------
Q 010340 225 DG--------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI------------------ 277 (512)
Q Consensus 225 ~~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~------------------ 277 (512)
.. ....||..|+|||++.+ ..++.++|||||||++|+|++|+.|+........
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 21 23467889999998765 4689999999999999999999977643210000
Q ss_pred -hccc---hhhhcccccCCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 278 -RGKN---ILHLMDSHLEGN---FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 278 -~~~~---~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.... ............ ..+..+..+.+|+.+||+.||.+|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 000000000000 111234668899999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=303.51 Aligned_cols=248 Identities=21% Similarity=0.268 Sum_probs=195.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCe---
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE--- 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 144 (512)
..|.+++.||.|+||.||+|.+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+.
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTK---TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECC---CCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 456678889999999999999987 778899999875322 123567889999999999999999998876554
Q ss_pred ---eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 145 ---RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 145 ---~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.++|+||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred cccEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEccccccc
Confidence 89999999 669999985 357999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC-CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh--------------
Q 010340 222 NSRDG-KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL-------------- 285 (512)
Q Consensus 222 ~~~~~-~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~-------------- 285 (512)
..... ....++..|+|||.+.+. .++.++|||||||++|+|++|+.||......... ..+...
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~ 245 (343)
T cd07851 167 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQL-KRIMNLVGTPDEELLQKISS 245 (343)
T ss_pred cccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHhcCCCCHHHHhhccc
Confidence 65432 345678889999998653 5788999999999999999999877533211000 000000
Q ss_pred ---------cccccCCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 286 ---------MDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 286 ---------~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.......+ ....+..+.+++.+||+.+|.+|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000 01235678899999999999999999999887
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=296.69 Aligned_cols=238 Identities=20% Similarity=0.199 Sum_probs=190.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---hHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+-+.+|+.||-|+||.|.++...+ +...||+|.+++.+.-.. ..+..|-+||...+.+.||+||-.|.+.+.+|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvD---T~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVD---TRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred cceEEEeeecccccceeEEEeecc---hhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence 345578899999999999999887 788899999987654332 34778999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
+||+|++||+|-.+|. ..+-|++..++.++.++..|+++.|..| +|||||||+|||||.+|++||+|||++.-+..
T Consensus 706 FVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999999987 5678999999999999999999999999 99999999999999999999999999753210
Q ss_pred --------C-------------------------------------CccccCcccCCcccccCCCCCCCCcEEehHHHHH
Q 010340 226 --------G-------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLL 260 (512)
Q Consensus 226 --------~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 260 (512)
. ...+||+.|+|||++....++..+|+||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 0246899999999999999999999999999999
Q ss_pred HHHhCCCCCChhhH--HHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCC
Q 010340 261 DLLSGKHIPPSHAL--DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318 (512)
Q Consensus 261 elltg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 318 (512)
||+.|+.||..... ......++...++-..... .++++.++|.+++ .+++.|.
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~----ls~e~~~li~kLc-~sad~RL 917 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGN----LSKEALDLIQKLC-CSADSRL 917 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccc----cCHHHHHHHHHHh-cChhhhh
Confidence 99999988754311 1122233333333333333 3444556665543 3566774
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=306.19 Aligned_cols=253 Identities=22% Similarity=0.302 Sum_probs=210.1
Q ss_pred ccccCCCCCCCeEEEEEEcCC-CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQDG-NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
..+.||.|+||+||+|.+--. ..-.-+||+|++....... ..++..|+-+|.+++|||+++|+|+|.... +.||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 456789999999999987542 2224479999988655432 468999999999999999999999998755 8899999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCccc-
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS- 230 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~- 230 (512)
+++|+|.++++. ....+.....+.|..||++||.|||.+. ++||||-.+|||+..-..+||.|||+++.........
T Consensus 779 mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~ 856 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS 856 (1177)
T ss_pred cccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence 999999999986 5667888999999999999999999998 9999999999999999999999999999876543222
Q ss_pred -----cCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 231 -----TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 231 -----~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
..+.|||-|.+....|+.++|||||||++||++| |..|... .....+.+++....+-..|+.++-++..
T Consensus 857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g-----i~~~eI~dlle~geRLsqPpiCtiDVy~ 931 (1177)
T KOG1025|consen 857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG-----IPAEEIPDLLEKGERLSQPPICTIDVYM 931 (1177)
T ss_pred ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC-----CCHHHhhHHHhccccCCCCCCccHHHHH
Confidence 2467999999999999999999999999999998 5555433 2223344455444555667888899999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
++.+||..|+..||+++++...+.++.+.+
T Consensus 932 ~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 932 VMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred HHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 999999999999999999999887766544
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=278.66 Aligned_cols=274 Identities=16% Similarity=0.221 Sum_probs=214.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
.+..++..||+|+|..|..+++++ +.+.+|+|++++....+ ...++.|-.+.... +||.+|.+...|..++.+
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~---t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl 326 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKK---TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL 326 (593)
T ss_pred ccceeeeeecCcchhhhhheehcc---cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence 344577888999999999999998 88999999999765544 34577788888777 799999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc--
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS-- 223 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~-- 223 (512)
++|.||++||+|--+++ ..+.++++.++.+..+|+-||.|||++| ||+||||.+|||+|..|++||+|+|+++..
T Consensus 327 ffvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCC
Confidence 99999999999977776 5678999999999999999999999999 999999999999999999999999998753
Q ss_pred --CCCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc---hhh-hcccccCCCCCHH
Q 010340 224 --RDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN---ILH-LMDSHLEGNFSSE 297 (512)
Q Consensus 224 --~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~ 297 (512)
...++++|||.|.|||++.+..|+...|+|+|||+++||+.|+.||.-...+...... +.+ ++.. ...+|..
T Consensus 404 ~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--qiriprs 481 (593)
T KOG0695|consen 404 PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIPRS 481 (593)
T ss_pred CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--cccccce
Confidence 2345789999999999999999999999999999999999999987633222111111 111 1221 1234555
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccccCCCCCCCCCC
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPP 352 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (512)
.+-....+++.-|++||.+|....--. -+..++..+.+....|.........||
T Consensus 482 lsvkas~vlkgflnkdp~erlgc~~~~-g~~dik~h~ffr~idwd~leqk~v~pp 535 (593)
T KOG0695|consen 482 LSVKASHVLKGFLNKDPKERLGCRPQT-GFSDIKSHAFFRSIDWDLLEQKQVLPP 535 (593)
T ss_pred eehhhHHHHHHhhcCCcHHhcCCCccc-chhhhhcchhhhhCCHHHHhhcccCCC
Confidence 566677899999999999996442111 344555555555555555544444444
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=283.55 Aligned_cols=253 Identities=21% Similarity=0.271 Sum_probs=193.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC--CCCCccceEEEEeeCC----e
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL--RHKRLANLIGYCCDGD----E 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~----~ 144 (512)
.-.+++.||+|.||.||+|.+ .++.||||++.... ...|.+|-++.+.. +|+||++++++-.... .
T Consensus 211 pl~l~eli~~Grfg~V~KaqL-----~~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQL-----DNRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhhc-----cCceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 344667789999999999999 45789999998543 45688887776654 8999999999876555 7
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------CccccccCccceeecCCCCCeeec
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--------RPLYHDLNAYRVLFDENGDPRLSC 216 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------~iiH~Dlkp~Nill~~~~~~kl~D 216 (512)
++||+||.+.|+|.++| ....++|....+|+..+++||+|||+.. +|+|||||..|||+.++++.-|+|
T Consensus 283 ywLVt~fh~kGsL~dyL---~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYL---KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eeEEeeeccCCcHHHHH---HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 99999999999999999 5678999999999999999999999742 489999999999999999999999
Q ss_pred ccCccccCCCC------ccccCcccCCcccccCCC-CC-----CCCcEEehHHHHHHHHhCCCCC-------ChhhHHHH
Q 010340 217 FGLMKNSRDGK------SYSTNLAYTPPEYLRNGR-VT-----PESVIFSFGTVLLDLLSGKHIP-------PSHALDMI 277 (512)
Q Consensus 217 fg~a~~~~~~~------~~~~t~~y~aPE~~~~~~-~~-----~~~Dv~slG~~l~elltg~~~~-------~~~~~~~~ 277 (512)
||+|..+.... ..+||..|||||++.+.- +. .+.||||+|.|||||++.-... +....+..
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 99998765432 468999999999996532 33 2589999999999999864321 11111100
Q ss_pred hc-----cchh-hhcccccCCCCCHH-----HHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 278 RG-----KNIL-HLMDSHLEGNFSSE-----EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 278 ~~-----~~~~-~~~~~~~~~~~~~~-----~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
.+ ..+. ..+....++.++.. -...+.+.++.||..||+.|.|+.=+-+.+..+....
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 00 1111 12223334444432 2456889999999999999999988888887766443
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-37 Score=263.89 Aligned_cols=261 Identities=20% Similarity=0.228 Sum_probs=209.2
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCcc
Q 010340 55 AEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLA 133 (512)
Q Consensus 55 ~~~~~~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 133 (512)
.-|+++.....+.+-++|+++.++|+|.++.||.|.... ++..++||++++-. .+.+.+|+++|..|. ||||+
T Consensus 23 eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~---~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi 96 (338)
T KOG0668|consen 23 EYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINIT---NNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNII 96 (338)
T ss_pred hhcchhheeeeccccchHHHHHHHcCccHhhHhcccccC---CCceEEEeeechHH---HHHHHHHHHHHHhccCCCCee
Confidence 357777777777788899999999999999999999877 77789999998643 467999999999995 99999
Q ss_pred ceEEEEeeC--CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CC
Q 010340 134 NLIGYCCDG--DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NG 210 (512)
Q Consensus 134 ~l~~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~ 210 (512)
+++++..++ ..+.||+||+.+.+...+. ..++...+..++.+++.||.|||+.| |+|||+||.|++||. .-
T Consensus 97 ~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~r 170 (338)
T KOG0668|consen 97 KLLDIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELR 170 (338)
T ss_pred ehhhhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhc
Confidence 999999775 4578999999998877665 35788889999999999999999999 999999999999995 45
Q ss_pred CCeeecccCccccCCCCcc---ccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHH---H------
Q 010340 211 DPRLSCFGLMKNSRDGKSY---STNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDM---I------ 277 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~~~~~---~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~---~------ 277 (512)
.++|+|+|+|.+..+...+ +.+..|.-||.+..- .|+.+-|+|||||+|..|+..+.||+-...+. .
T Consensus 171 kLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVL 250 (338)
T KOG0668|consen 171 KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVL 250 (338)
T ss_pred eeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHh
Confidence 6999999999998877654 457789999998664 48999999999999999999999987531110 0
Q ss_pred ---------------hccchhhhcccccCCCCC--------HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 278 ---------------RGKNILHLMDSHLEGNFS--------SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 278 ---------------~~~~~~~~~~~~~~~~~~--------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
-......++....+..+. .-.++++.+|+.++|..|-.+|+|+.|++.|-
T Consensus 251 Gt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp 323 (338)
T KOG0668|consen 251 GTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP 323 (338)
T ss_pred ChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence 001111222222221111 12347789999999999999999999998873
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=309.13 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=207.2
Q ss_pred ccCCCCCCCeEEEEEEcCCCC----CceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEE
Q 010340 76 SESGEKAPNVVYKGRLQDGND----NRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.||+|.||.|++|....-.. ....||||.++..... +.+.+..|+++|+.+ .|+||+.++|+|...+..++|+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~ 381 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV 381 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence 367999999999998653221 2567999999866544 356799999999999 7999999999999999999999
Q ss_pred EccCCCCHHhhhhhcC------------C--CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeee
Q 010340 150 EYMPNDTLAKHLFHWE------------N--QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~------------~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 215 (512)
||+..|+|.++|++.. . ..++....+.++.||+.|++||++.. +|||||-.+|||+..+..+||+
T Consensus 382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIa 460 (609)
T KOG0200|consen 382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIA 460 (609)
T ss_pred EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEc
Confidence 9999999999998643 0 13888999999999999999999998 9999999999999999999999
Q ss_pred cccCccccCCCCcc-----cc--CcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc
Q 010340 216 CFGLMKNSRDGKSY-----ST--NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 216 Dfg~a~~~~~~~~~-----~~--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
|||+++.......+ .+ ...|||||.+....|+.++|||||||+||||+|...+|..... ....+.+.+..
T Consensus 461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---~~~~l~~~l~~ 537 (609)
T KOG0200|consen 461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---PTEELLEFLKE 537 (609)
T ss_pred cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---cHHHHHHHHhc
Confidence 99999965443322 22 2349999999998999999999999999999996655443311 01222334455
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
..+...|..++.++.+++..||+.+|++||++.++.+.|....
T Consensus 538 G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 538 GNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 5566678888899999999999999999999999999998843
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=269.82 Aligned_cols=235 Identities=23% Similarity=0.301 Sum_probs=193.7
Q ss_pred CCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCCCHHhh
Q 010340 82 APNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160 (512)
Q Consensus 82 ~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~ 160 (512)
+||.||+|.... +++.+|+|++....... .+.+.+|++.+++++|+||+++++++......+++|||+++++|.++
T Consensus 1 ~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKK---TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECC---CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 578999999986 67889999998766544 67899999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---CccccCcccCC
Q 010340 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KSYSTNLAYTP 237 (512)
Q Consensus 161 l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~t~~y~a 237 (512)
+.. ...+++..++.++.+++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||.+...... ....++..|++
T Consensus 78 ~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
T smart00220 78 LKK--RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMA 154 (244)
T ss_pred HHh--ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCC
Confidence 963 233899999999999999999999998 999999999999999999999999998766543 34567889999
Q ss_pred cccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH--HHHHHHHHHHHhhccCCC
Q 010340 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE--EATVVFDLASRCLQYEPR 315 (512)
Q Consensus 238 PE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~cl~~~p~ 315 (512)
||.+.+..++.++||||||+++++|++|..|+..... ................... .+..+.+++.+||..+|+
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 230 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ----LLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPE 230 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCch
Confidence 9999888899999999999999999999977644110 0111111111111111111 556788999999999999
Q ss_pred CCCChHHHHHH
Q 010340 316 ERPNTKDLVST 326 (512)
Q Consensus 316 ~Rps~~~vl~~ 326 (512)
+||++.+++++
T Consensus 231 ~Rp~~~~~~~~ 241 (244)
T smart00220 231 KRLTAEEALQH 241 (244)
T ss_pred hccCHHHHhhC
Confidence 99999999874
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=301.91 Aligned_cols=251 Identities=20% Similarity=0.216 Sum_probs=168.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCC----ceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEE------
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDN----RRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGY------ 138 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------ 138 (512)
..++.+++.||+|+||.||+|.+.. + +..||||++..... .+.+..| .+....+.+++.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~---~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVN---KQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcC---CccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 4556778889999999999999986 5 78899999764321 1222221 1222223333332222
Q ss_pred EeeCCeeEEEEEccCCCCHHhhhhhcCC------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccC
Q 010340 139 CCDGDERLLVAEYMPNDTLAKHLFHWEN------------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200 (512)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlk 200 (512)
+......+|||||+.+++|.+++..... .......+..++.||+.||.|||+.+ |+|||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLK 282 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVK 282 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCC
Confidence 2456678999999999999999864211 01123446689999999999999998 9999999
Q ss_pred ccceeecC-CCCCeeecccCccccCC-----CCccccCcccCCcccccCCC----------------------CCCCCcE
Q 010340 201 AYRVLFDE-NGDPRLSCFGLMKNSRD-----GKSYSTNLAYTPPEYLRNGR----------------------VTPESVI 252 (512)
Q Consensus 201 p~Nill~~-~~~~kl~Dfg~a~~~~~-----~~~~~~t~~y~aPE~~~~~~----------------------~~~~~Dv 252 (512)
|+|||++. ++.+||+|||+++.... .....+|+.|+|||.+.... ++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999985 68999999999975432 23457889999999763322 3446799
Q ss_pred EehHHHHHHHHhCCCCCChhhHHH---Hhc--cchhhhcccccCCCCCHH----------HHHHHHHHHHHhhccCCCCC
Q 010340 253 FSFGTVLLDLLSGKHIPPSHALDM---IRG--KNILHLMDSHLEGNFSSE----------EATVVFDLASRCLQYEPRER 317 (512)
Q Consensus 253 ~slG~~l~elltg~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~----------~~~~~~~li~~cl~~~p~~R 317 (512)
|||||+||||+++..+........ +.. .....+.. ........+ ......+|+.+||+.||++|
T Consensus 363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRK-LVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHH-hhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 999999999999865433221111 000 00011100 001111111 11234589999999999999
Q ss_pred CChHHHHHHhc
Q 010340 318 PNTKDLVSTLA 328 (512)
Q Consensus 318 ps~~~vl~~L~ 328 (512)
||+.++++|-.
T Consensus 442 ~ta~e~L~Hpf 452 (566)
T PLN03225 442 ISAKAALAHPY 452 (566)
T ss_pred CCHHHHhCCcC
Confidence 99999999743
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=244.91 Aligned_cols=195 Identities=18% Similarity=0.185 Sum_probs=165.0
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
.+.+||+|++|.|-+-++.. +|+..|+|.+....... .++..+|+++..+. .+|.+|.+||........+|.||.
T Consensus 50 ~i~elGrGayG~vekmrh~~---sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQ---SGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhcCCccchhhheeecc---CCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 46688999999999999988 99999999998654322 35678888886655 899999999999999999999999
Q ss_pred cCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 152 MPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 152 ~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
|.- ||..+-++ ..++.+++..+-+|+..|..||.|||++-.+||||+||+|||++.+|++|+||||++....++-
T Consensus 127 M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAk 205 (282)
T KOG0984|consen 127 MDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAK 205 (282)
T ss_pred hhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHH
Confidence 954 78766543 2567899999999999999999999998669999999999999999999999999987655432
Q ss_pred -ccccCcccCCcccccC----CCCCCCCcEEehHHHHHHHHhCCCCCChh
Q 010340 228 -SYSTNLAYTPPEYLRN----GRVTPESVIFSFGTVLLDLLSGKHIPPSH 272 (512)
Q Consensus 228 -~~~~t~~y~aPE~~~~----~~~~~~~Dv~slG~~l~elltg~~~~~~~ 272 (512)
-..|-..|||||.+.. ..|+-+|||||||+++.||.+++.|...+
T Consensus 206 t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 206 TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 2356678999999843 35899999999999999999999886654
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=269.21 Aligned_cols=251 Identities=22% Similarity=0.253 Sum_probs=191.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC--CCCCccceEEEEeeC----Ce
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL--RHKRLANLIGYCCDG----DE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~ 144 (512)
...+++.||+|.||.||+|.++ |..||||++... ++..+.+|.++.+.+ +|+||+.+++.-..+ ..
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wr-----Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWR-----GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred eeEEEEEecCccccceeecccc-----CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 3446788999999999999995 566999999754 346688888888765 999999999875433 35
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----C--CccccccCccceeecCCCCCeeecc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-----G--RPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~--~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
++||++|.+.|||+|+|. ...++-...++++..++.||++||.. | .|.|||||..|||+..+|..-|+|+
T Consensus 284 LwLvTdYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEEeeecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 899999999999999994 47899999999999999999999963 2 3899999999999999999999999
Q ss_pred cCccccCCC--------CccccCcccCCcccccCCC----CC--CCCcEEehHHHHHHHHhCC----------CCCChhh
Q 010340 218 GLMKNSRDG--------KSYSTNLAYTPPEYLRNGR----VT--PESVIFSFGTVLLDLLSGK----------HIPPSHA 273 (512)
Q Consensus 218 g~a~~~~~~--------~~~~~t~~y~aPE~~~~~~----~~--~~~Dv~slG~~l~elltg~----------~~~~~~~ 273 (512)
|+|...... ...+||..|||||++...- |. ..+||||||.|+||+...- .|+....
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 999764433 2457999999999995421 22 2589999999999997532 2333222
Q ss_pred HHHHhccchhhhc-ccccCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 274 LDMIRGKNILHLM-DSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
........+.+.+ ...+++.+| ......+.++++.||..||.-|.|+-.+.+.|..+.+
T Consensus 441 p~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 441 PSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1111111222221 112222222 3455678899999999999999999999999888764
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-36 Score=263.65 Aligned_cols=246 Identities=20% Similarity=0.252 Sum_probs=190.0
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeC-----CeeEEE
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG-----DERLLV 148 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lv 148 (512)
+.||.|+||+||.+.+.. +|+.||+|++..-.. ..-+.+.+|+++|..++|.||+..++...-. .++|+|
T Consensus 59 RPIGYGAFGVVWsVTDPR---dgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPR---SGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CcccccceeEEEeccCCC---CccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 357999999999999987 899999999874321 2246789999999999999999999876533 347889
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
+|++.. +|+.++. ..+.++...+.-++.||++||.|||+.+ |.||||||.|+|++.+..+||||||+++......
T Consensus 136 TELmQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~ 211 (449)
T KOG0664|consen 136 TELMQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR 211 (449)
T ss_pred HHHHHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhh
Confidence 999955 8999887 7788999999999999999999999999 9999999999999999999999999998754432
Q ss_pred ----ccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChh----hHHHH---h------------ccchh
Q 010340 228 ----SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSH----ALDMI---R------------GKNIL 283 (512)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~----~~~~~---~------------~~~~~ 283 (512)
..+.|..|.|||++.|.. |+.+.||||.|||+.||+..+..|... ..+.+ . .+...
T Consensus 212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~ 291 (449)
T KOG0664|consen 212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN 291 (449)
T ss_pred hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence 335688999999998865 899999999999999999877654321 00000 0 01111
Q ss_pred hhcccccCC-CCC--------HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 284 HLMDSHLEG-NFS--------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 284 ~~~~~~~~~-~~~--------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.++....+. .++ .....+...++..+|..||+.|.+..+.+.++.
T Consensus 292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 111111111 111 122234567888999999999999999988764
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=284.81 Aligned_cols=258 Identities=16% Similarity=0.172 Sum_probs=180.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC-------------CCceEEEEEecCccCCCChh--------------HHHHHHHH
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN-------------DNRRWIAVKKFTKHAWPDPK--------------QFADEAWG 123 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~-------------~~~~~vavK~~~~~~~~~~~--------------~~~~E~~~ 123 (512)
++.+..+||+|+||.||+|...... ..++.||||++........+ ....|+.+
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~ 225 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM 225 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence 4556778899999999999753211 14567999998754322222 23457777
Q ss_pred HhcCCCCCc-----cceEEEEee--------CCeeEEEEEccCCCCHHhhhhhcC----------------------CCC
Q 010340 124 VGKLRHKRL-----ANLIGYCCD--------GDERLLVAEYMPNDTLAKHLFHWE----------------------NQT 168 (512)
Q Consensus 124 l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~E~~~~g~L~~~l~~~~----------------------~~~ 168 (512)
+.+++|.++ ++++++|.. .+..+|||||+++++|.++++... ...
T Consensus 226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~ 305 (507)
T PLN03224 226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK 305 (507)
T ss_pred HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence 777766554 677887753 356899999999999999986321 123
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-----ccccCcccCCcccccC
Q 010340 169 IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-----SYSTNLAYTPPEYLRN 243 (512)
Q Consensus 169 l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-----~~~~t~~y~aPE~~~~ 243 (512)
+++..++.++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++....... ...+|+.|+|||.+..
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~ 384 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM 384 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence 467788999999999999999998 9999999999999999999999999987543321 1234789999999854
Q ss_pred CC--------------------CC--CCCcEEehHHHHHHHHhCCCCCChhhH----HHHhccchhh----hcccccCCC
Q 010340 244 GR--------------------VT--PESVIFSFGTVLLDLLSGKHIPPSHAL----DMIRGKNILH----LMDSHLEGN 293 (512)
Q Consensus 244 ~~--------------------~~--~~~Dv~slG~~l~elltg~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~ 293 (512)
.. ++ .+.||||+||++|+|++|..+++.... +......... .......-.
T Consensus 385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~ 464 (507)
T PLN03224 385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS 464 (507)
T ss_pred CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc
Confidence 32 11 246999999999999999864332211 0000011111 111111111
Q ss_pred CCHHHHHHHHHHHHHhhccCC---CCCCChHHHHHHhcc
Q 010340 294 FSSEEATVVFDLASRCLQYEP---RERPNTKDLVSTLAP 329 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p---~~Rps~~~vl~~L~~ 329 (512)
.....++...+|+.++|..+| .+|+|++++|+|-+.
T Consensus 465 ~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f 503 (507)
T PLN03224 465 LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF 503 (507)
T ss_pred cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence 123446678899999999866 689999999998553
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=284.51 Aligned_cols=246 Identities=19% Similarity=0.222 Sum_probs=205.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+|+.+..+|.|+||.|||++++. +++..|||+++.....+..-..+|+-+++..+|||||.++|.+......+++|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~---s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKR---SGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred cchhheeeecCCcccchhhhcccc---cCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 356688889999999999999998 88999999999887777778899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC----C
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----D 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~----~ 225 (512)
|||.||+|.+.-+ -.+++++.++..+++..++||+|||+.+ -+|||||..|||+++.|.+|+.|||.+-.+. .
T Consensus 92 EycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~K 168 (829)
T KOG0576|consen 92 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK 168 (829)
T ss_pred EecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhh
Confidence 9999999999886 6789999999999999999999999999 9999999999999999999999999876543 3
Q ss_pred CCccccCcccCCcccc---cCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc----CCCCCHHH
Q 010340 226 GKSYSTNLAYTPPEYL---RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL----EGNFSSEE 298 (512)
Q Consensus 226 ~~~~~~t~~y~aPE~~---~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 298 (512)
...+.||+.|||||+. ..+.|...+|||++|+...|+---++|.+.- . ..+...++.... .-+-....
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl-h----pmr~l~LmTkS~~qpp~lkDk~kw 243 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL-H----PMRALFLMTKSGFQPPTLKDKTKW 243 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc-c----hHHHHHHhhccCCCCCcccCCccc
Confidence 4678999999999997 3466999999999999999998777553321 0 011111111100 11112345
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
++.+.+|++.||.++|++||++..++.|
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhheec
Confidence 6678899999999999999999887764
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=262.74 Aligned_cols=136 Identities=19% Similarity=0.196 Sum_probs=117.0
Q ss_pred cCCC--cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-----C---CCccceE
Q 010340 67 NNFS--SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-----H---KRLANLI 136 (512)
Q Consensus 67 ~~f~--~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~ 136 (512)
+.|. .|.++++||-|-|++||++.+.. +.+.||+|+.+.... -.+....||++|++++ | ..||+|+
T Consensus 73 D~F~~gRY~v~rKLGWGHFSTVWLawDtq---~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~Ll 148 (590)
T KOG1290|consen 73 DVFNGGRYHVQRKLGWGHFSTVWLAWDTQ---NKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLL 148 (590)
T ss_pred ccccCceEEEEEeccccccceeEEEeecc---CCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeee
Confidence 4454 57789999999999999999998 788999999875432 2356788999999883 3 3599999
Q ss_pred EEEee----CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec
Q 010340 137 GYCCD----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 137 ~~~~~----~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~ 207 (512)
+.|.. +.+++||+|++ |.+|..+|....-+.++...+..|++||+.||.|||...+|||.||||+|||+.
T Consensus 149 D~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 149 DHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred ccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 99975 56899999999 779999998767788999999999999999999999887799999999999983
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.4e-33 Score=279.30 Aligned_cols=241 Identities=24% Similarity=0.248 Sum_probs=180.0
Q ss_pred CCcccccccCCCCCCC-eEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPN-VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g-~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
|+...++ |.|+-| .||+|.. .++.||||++-... ..-..+||.+|+.- .|||||++++.-.+....|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-----e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~Y 579 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-----EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLY 579 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-----CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEE
Confidence 4444444 444444 5799998 56789999986543 34678999999998 7999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---C--CCCeeecccC
Q 010340 147 LVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---N--GDPRLSCFGL 219 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~--~~~kl~Dfg~ 219 (512)
|..|.|.. +|.+++... ......-...+.++.|+++||++||+.+ ||||||||.||||+. + .+++|+|||+
T Consensus 580 IalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 580 IALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred EEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccc
Confidence 99999955 999999642 1111111345778999999999999998 999999999999975 3 4689999999
Q ss_pred ccccCCC-------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC
Q 010340 220 MKNSRDG-------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 220 a~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
++..... ....||-+|+|||++....-+.+.||+|+|||+|..++|..-++++... ...++..-...-..-
T Consensus 658 sKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~~~~L~~L 735 (903)
T KOG1027|consen 658 SKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTGNYTLVHL 735 (903)
T ss_pred ccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcCccceeee
Confidence 9876543 2456899999999999888888999999999999999985444433221 111111100000000
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
....++ ++.+||.+|++.+|..||++.+|+.|
T Consensus 736 ~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 736 EPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 011112 67899999999999999999999987
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-33 Score=270.21 Aligned_cols=201 Identities=17% Similarity=0.181 Sum_probs=176.7
Q ss_pred HHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------C--hhHHHHHHHHHhcCC---CCCc
Q 010340 64 AATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------D--PKQFADEAWGVGKLR---HKRL 132 (512)
Q Consensus 64 ~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------~--~~~~~~E~~~l~~l~---h~ni 132 (512)
....+|++|..++.+|.|+||.|++|.++. +...|+||.+.+...- + .-.+-.||.+|..++ |+||
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~---n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NI 631 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKE---NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENI 631 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecc---cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccch
Confidence 345678889999999999999999999998 7889999999875431 1 124677999999997 9999
Q ss_pred cceEEEEeeCCeeEEEEEc-cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 133 ANLIGYCCDGDERLLVAEY-MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 133 v~l~~~~~~~~~~~lv~E~-~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
++++++|++++.+||+||- -+|-+|++++. -...+++.++..|++||+.|+++||+.+ |||||||-+||.++.+|.
T Consensus 632 lKlLdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~ 708 (772)
T KOG1152|consen 632 LKLLDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGF 708 (772)
T ss_pred hhhhheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCe
Confidence 9999999999999999995 46679999996 5567999999999999999999999999 999999999999999999
Q ss_pred CeeecccCccccC--CCCccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCC
Q 010340 212 PRLSCFGLMKNSR--DGKSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPP 270 (512)
Q Consensus 212 ~kl~Dfg~a~~~~--~~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~ 270 (512)
+||+|||.+.... +...++||..|.|||++.|.+| +..-|||++|++||.++....|++
T Consensus 709 ~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 709 VKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999886543 4568899999999999999887 556899999999999998888754
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-33 Score=267.96 Aligned_cols=252 Identities=19% Similarity=0.170 Sum_probs=197.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC------CCCccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR------HKRLANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~ 143 (512)
+.|.|.+..|+|-|++|.+|.+.. .+..||||++...... .+.=.+|+++|++|. --|+++|+..|...+
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~---r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQA---RGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred ceeEEEeccccceeeeeeeccccC---CCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 346788889999999999999987 6678999999865432 234467999999995 357999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CCCCeeecccCcc
Q 010340 144 ERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMK 221 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~a~ 221 (512)
++|||||-+ .-+|.++|.. ..+-.|....+..++.|++-||..|...+ |+|.||||.|||+++ ...+||||||.|.
T Consensus 508 HLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 508 HLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred eeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCcccc
Confidence 999999998 4589999975 23456888899999999999999999999 999999999999984 5679999999987
Q ss_pred ccCCC--CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------ccchh------hhc
Q 010340 222 NSRDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------GKNIL------HLM 286 (512)
Q Consensus 222 ~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~~~~------~~~ 286 (512)
...+. +.+..+..|.|||++.|-+|+...|+||+||+||||.||+.+|++...+.+. +.-.. ++.
T Consensus 586 ~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~ 665 (752)
T KOG0670|consen 586 FASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFK 665 (752)
T ss_pred ccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchh
Confidence 76543 3455677899999999999999999999999999999999988764221100 00000 000
Q ss_pred ccccC--------------------------------------CCCC---HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 010340 287 DSHLE--------------------------------------GNFS---SEEATVVFDLASRCLQYEPRERPNTKDLVS 325 (512)
Q Consensus 287 ~~~~~--------------------------------------~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~~vl~ 325 (512)
+.++. ..++ +.....+.+|+.+||..||++|.|..++|+
T Consensus 666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 00000 0111 223456889999999999999999999998
Q ss_pred Hh
Q 010340 326 TL 327 (512)
Q Consensus 326 ~L 327 (512)
|-
T Consensus 746 Hp 747 (752)
T KOG0670|consen 746 HP 747 (752)
T ss_pred CC
Confidence 74
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-32 Score=247.11 Aligned_cols=245 Identities=19% Similarity=0.233 Sum_probs=189.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC--CCChhHHHHHHHHHhcCCCCCccceEEEEeeC------C
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG------D 143 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 143 (512)
|.-++.+|.|.- .|..+.+.- .++.||+|++.... ....++..+|..++..+.|+||++++.+|.-. .
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v---~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQV---LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeecccCCCCc-eEEecchhh---ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 344667788876 566666655 77889999987542 23356889999999999999999999998643 3
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
..|+|||++.. +|...+. -.++-.++..|..|++.|++|||+.+ |+||||||+||++..+..+||.|||+++..
T Consensus 95 e~y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhccc
Confidence 57999999965 8998885 35677889999999999999999999 999999999999999999999999999875
Q ss_pred CCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH-HHH----------------------
Q 010340 224 RDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL-DMI---------------------- 277 (512)
Q Consensus 224 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-~~~---------------------- 277 (512)
... +.++.|..|.|||++.+..+...+||||+||++.||++|+..|++... +.+
T Consensus 169 ~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~ 248 (369)
T KOG0665|consen 169 DTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTV 248 (369)
T ss_pred CcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHH
Confidence 543 356778999999999988899999999999999999999987764310 000
Q ss_pred ----h------ccchhhhccccc-CC--CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 278 ----R------GKNILHLMDSHL-EG--NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 278 ----~------~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. .......+.... .. +.++..+..+.+++.+||..||++|.|+.++|.|
T Consensus 249 r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 249 RNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0 000001100000 00 0112234457899999999999999999999987
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=239.41 Aligned_cols=208 Identities=30% Similarity=0.402 Sum_probs=184.2
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 156 (512)
||.|++|.||++.... +++.++||++...... ..+.+.+|+..++.++|++|+++++++......+++||++++++
T Consensus 1 l~~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKK---TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecC---CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 5899999999999976 6888999999866532 24679999999999999999999999999999999999999999
Q ss_pred HHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CCCCeeecccCccccCCC----Ccccc
Q 010340 157 LAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRDG----KSYST 231 (512)
Q Consensus 157 L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~----~~~~~ 231 (512)
|.+++... ...+++..+..++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+
T Consensus 78 l~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 78 LKDLLKEN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred HHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccC
Confidence 99999632 146899999999999999999999998 999999999999998 899999999998765543 33456
Q ss_pred CcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhh
Q 010340 232 NLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310 (512)
Q Consensus 232 t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 310 (512)
...|++||.+... .++.++|+|++|+++++| ..+.+++..|+
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l 198 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKML 198 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHh
Confidence 7889999999776 788999999999999999 45779999999
Q ss_pred ccCCCCCCChHHHHHHh
Q 010340 311 QYEPRERPNTKDLVSTL 327 (512)
Q Consensus 311 ~~~p~~Rps~~~vl~~L 327 (512)
..+|.+||++.++++++
T Consensus 199 ~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 199 QKDPEKRPSAKEILEHL 215 (215)
T ss_pred hCCcccCcCHHHHhhCC
Confidence 99999999999998764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=246.16 Aligned_cols=249 Identities=18% Similarity=0.221 Sum_probs=198.0
Q ss_pred ccCCCCCCCeEEEEEEcCCCC--CceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEee-CCeeEEEEEc
Q 010340 76 SESGEKAPNVVYKGRLQDGND--NRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLVAEY 151 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~E~ 151 (512)
..+-+|.||.||+|.+++... +.+.|-||.++....+ ....+..|..++..+.|||+.++.+++.+ ....+.++.+
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~ 369 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPA 369 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEec
Confidence 345799999999998765321 3345677887754422 23568899999999999999999999875 4668899999
Q ss_pred cCCCCHHhhhhhc------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 152 MPNDTLAKHLFHW------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 152 ~~~g~L~~~l~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+.-|+|..+|... ..+.++-.+...++.|++.|+.|||+.+ +||.||-.+|.+||+...+||+|=.+++..-+
T Consensus 370 ~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP 448 (563)
T KOG1024|consen 370 TGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDLFP 448 (563)
T ss_pred cCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccccCc
Confidence 9889999999721 2345777888999999999999999999 99999999999999999999999999886554
Q ss_pred CCc-c-----ccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 226 GKS-Y-----STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 226 ~~~-~-----~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
... . .....||+||.+....|+.++|||||||+||||+|-...|..+.. ...+...+....+-.-|-+|+
T Consensus 449 ~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID----PfEm~~ylkdGyRlaQP~NCP 524 (563)
T KOG1024|consen 449 GDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID----PFEMEHYLKDGYRLAQPFNCP 524 (563)
T ss_pred ccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC----HHHHHHHHhccceecCCCCCc
Confidence 432 2 234679999999999999999999999999999985544444322 222333333344445567889
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.++..++..||+..|++||++++++.-|..
T Consensus 525 DeLf~vMacCWallpeeRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 525 DELFTVMACCWALLPEERPSFSQLVICLSE 554 (563)
T ss_pred HHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 999999999999999999999999988764
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=245.44 Aligned_cols=248 Identities=22% Similarity=0.297 Sum_probs=192.9
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.++.+||.|+|++||++.+.......+.||+|.+..-. .+..+.+|+++|..+ .+.||+++.+++..++...+|||
T Consensus 38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp 115 (418)
T KOG1167|consen 38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP 115 (418)
T ss_pred hhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence 456788999999999999887533356789999997644 456799999999999 79999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec-CCCCCeeecccCcccc------
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNS------ 223 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~------ 223 (512)
|++..+..++.. .++...+..+++.++.||.++|.+| ||||||||+|+|.+ .-+.-.|+|||+|...
T Consensus 116 ~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~ 189 (418)
T KOG1167|consen 116 YFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT 189 (418)
T ss_pred ccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhhh
Confidence 999999988885 4778899999999999999999999 99999999999998 4577899999998610
Q ss_pred -----------CC--C-----------------------------CccccCcccCCcccccCCC-CCCCCcEEehHHHHH
Q 010340 224 -----------RD--G-----------------------------KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLL 260 (512)
Q Consensus 224 -----------~~--~-----------------------------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~ 260 (512)
.. + ....||++|.|||++...+ .+++.||||.|||++
T Consensus 190 ~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~L 269 (418)
T KOG1167|consen 190 EHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILL 269 (418)
T ss_pred hhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceee
Confidence 00 0 0124789999999997655 788999999999999
Q ss_pred HHHhCCCCCChhhHHH---------H-----------hcc-------c----------hhhh-cccccCC--------CC
Q 010340 261 DLLSGKHIPPSHALDM---------I-----------RGK-------N----------ILHL-MDSHLEG--------NF 294 (512)
Q Consensus 261 elltg~~~~~~~~~~~---------~-----------~~~-------~----------~~~~-~~~~~~~--------~~ 294 (512)
.+++++.||+....+. + .+. + +..+ ....... .+
T Consensus 270 slls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~ 349 (418)
T KOG1167|consen 270 SLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIG 349 (418)
T ss_pred hhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccc
Confidence 9999999987431110 0 000 0 0000 0000000 00
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
....+..+.+|+.+||..||.+|.|+++.|+|-
T Consensus 350 ~d~~~~~~~dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 350 SDVFPALLLDLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred cccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence 111234688999999999999999999999874
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=229.38 Aligned_cols=248 Identities=19% Similarity=0.218 Sum_probs=185.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEE-EeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGY-CCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv 148 (512)
.|.|++.+|+|-||.+-++.++. +...+++|.+.... ....+|.+|.----.| .|.||+.-|++ |...+.++++
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~---s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQ---SKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccC---CceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 45578889999999999999998 78889999998654 3467899999877777 68999988875 5667788899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee-c-CCCCCeeecccCccccCCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF-D-ENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill-~-~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||++.|+|.+-+ ....+.+.-..+++.|+++||.|+|+++ +||||||.+|||| + +.-++||||||+.+.....
T Consensus 101 qE~aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 101 QEFAPRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred eccCccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 9999999999988 5567888899999999999999999999 9999999999998 3 4457999999998765443
Q ss_pred Cc-cccCcccCCcccccC---CC--CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh---cccccCCCCCHH
Q 010340 227 KS-YSTNLAYTPPEYLRN---GR--VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL---MDSHLEGNFSSE 297 (512)
Q Consensus 227 ~~-~~~t~~y~aPE~~~~---~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 297 (512)
-. ..-+..|.+||.+.. +. ..+.+|||.||+++|.++||..|+..........-++... ....+...+ ..
T Consensus 177 V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F-~~ 255 (378)
T KOG1345|consen 177 VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKF-NP 255 (378)
T ss_pred ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhh-cc
Confidence 22 234677999998743 22 5778999999999999999997754221111111111111 111111111 22
Q ss_pred HHHHHHHHHHHhhccCCCCC---CChHHHHHHh
Q 010340 298 EATVVFDLASRCLQYEPRER---PNTKDLVSTL 327 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~R---ps~~~vl~~L 327 (512)
.++.+..+.++-|..+|++| .+.+.....+
T Consensus 256 fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 256 FSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred cCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 34557788999999999999 4444444333
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=234.09 Aligned_cols=192 Identities=27% Similarity=0.295 Sum_probs=169.9
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
+...||.|++|.||++.... +++.+|+|.+...... ..+.+.+|++.+.+++|+||+++++++......++++||+
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKG---TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred eeeEeecCCCeEEEEEEEcC---CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 45678999999999999986 6788999999876544 4678999999999999999999999999989999999999
Q ss_pred CCCCHHhhhhhcCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-----
Q 010340 153 PNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----- 226 (512)
++++|.+++.. ... +++..+..++.+++.+|.+||+.+ ++|+||+|.||+++.++.++|+|||++......
T Consensus 80 ~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 80 EGGDLFDYLRK--KGGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 99999999964 223 899999999999999999999998 999999999999999999999999998766543
Q ss_pred CccccCcccCCcccc-cCCCCCCCCcEEehHHHHHHHHhCCCCCCh
Q 010340 227 KSYSTNLAYTPPEYL-RNGRVTPESVIFSFGTVLLDLLSGKHIPPS 271 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~~l~elltg~~~~~~ 271 (512)
....++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 345678889999998 666788899999999999999999987644
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=277.03 Aligned_cols=193 Identities=17% Similarity=0.181 Sum_probs=142.2
Q ss_pred cCCC-CCccceEEEE-------eeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 010340 126 KLRH-KRLANLIGYC-------CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197 (512)
Q Consensus 126 ~l~h-~niv~l~~~~-------~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~ 197 (512)
.++| +||++++++| .+...++++|||+ +++|.++|.. ....+++.+++.|+.||+.||.|||+++ |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4555 6888899887 2334678889988 5599999964 3456999999999999999999999999 9999
Q ss_pred ccCccceeecC-------------------CCCCeeecccCccccCC--------------------CCccccCcccCCc
Q 010340 198 DLNAYRVLFDE-------------------NGDPRLSCFGLMKNSRD--------------------GKSYSTNLAYTPP 238 (512)
Q Consensus 198 Dlkp~Nill~~-------------------~~~~kl~Dfg~a~~~~~--------------------~~~~~~t~~y~aP 238 (512)
||||+||||+. ++.+|++|||+++.... .....||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 45677777877753211 0013468889999
Q ss_pred ccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCC
Q 010340 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318 (512)
Q Consensus 239 E~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 318 (512)
|++.+..++.++|||||||+||||++|..|+.... ... ..+......... .........++.+||+.+|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-RTM-----SSLRHRVLPPQI-LLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-HHH-----HHHHHhhcChhh-hhcCHHHHHHHHHhCCCChhhCc
Confidence 99999999999999999999999999886543211 111 011001111111 11233456889999999999999
Q ss_pred ChHHHHHHhc
Q 010340 319 NTKDLVSTLA 328 (512)
Q Consensus 319 s~~~vl~~L~ 328 (512)
++.+++++-.
T Consensus 258 s~~eil~h~~ 267 (793)
T PLN00181 258 SMSELLQSEF 267 (793)
T ss_pred ChHHHhhchh
Confidence 9999998743
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-29 Score=220.75 Aligned_cols=253 Identities=20% Similarity=0.259 Sum_probs=202.8
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
|++..++.+|.+.-.|..|+|++... .+++|++....... ...|..|.-.|+.+.||||+.++|.|..+.++.
T Consensus 189 ~~~lnl~tkl~e~hsgelwrgrwqgn-----divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 189 VSSLNLITKLAESHSGELWRGRWQGN-----DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred hhhhhhhhhhccCCCcccccccccCc-----chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 34445666777888889999999753 27778887655443 257999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccc-ccCccceeecCCCCCeeecccCccccCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~-Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+|..||+.|+|+.+|+....-.++-.++.+++.+|++|++|||+..++|-| -|....+++|++.+++|+- +-.++.-.
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarism-ad~kfsfq 342 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSFQ 342 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheec-ccceeeee
Confidence 999999999999999876666788899999999999999999998877777 8999999999999988762 21222222
Q ss_pred CCccccCcccCCcccccCCCC---CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 GKSYSTNLAYTPPEYLRNGRV---TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 ~~~~~~t~~y~aPE~~~~~~~---~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.....-++.||+||.++..+- -.++|+|||.++||||.|...||... .... --.++.-+.++..+|+..+..+
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadl-spme---cgmkialeglrv~ippgis~hm 418 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADL-SPME---CGMKIALEGLRVHIPPGISRHM 418 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccC-Cchh---hhhhhhhccccccCCCCccHHH
Confidence 222334789999999987663 34799999999999999999876432 1111 1233444567777888888999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+|+.-|+..||.+||.+..|+-.|+.+.
T Consensus 419 ~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 419 NKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999999999888764
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-28 Score=215.29 Aligned_cols=166 Identities=16% Similarity=0.110 Sum_probs=126.8
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCccccCcc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~~ 234 (512)
|||.+++.. ....+++..++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||++....... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999964 3557999999999999999999999986 999999999999999 99987654433 368899
Q ss_pred cCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC--CCCCHHHHH--HHHHHHHHhh
Q 010340 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE--GNFSSEEAT--VVFDLASRCL 310 (512)
Q Consensus 235 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~li~~cl 310 (512)
|||||++.+..++.++|||||||++|||+||+.|+............+......... ...+..... .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 999999999999999999999999999999998764321100000011111111100 011223333 5899999999
Q ss_pred ccCCCCCCChHHHHHHhcccc
Q 010340 311 QYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 311 ~~~p~~Rps~~~vl~~L~~~~ 331 (512)
..+|.+||++.++++++..+.
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hcccccccCHHHHHHHHHHHH
Confidence 999999999999999987653
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=222.09 Aligned_cols=257 Identities=16% Similarity=0.110 Sum_probs=196.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCC----CCccceEEEE-eeCCee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH----KRLANLIGYC-CDGDER 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~ 145 (512)
.+.+.+.||+|+||.||++.+.... ...+|+|............+..|+.++..+.. +++..+++.+ ..+...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~--~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK--NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC--CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 5778899999999999999987632 46799999876544333378889999999963 6899999999 577889
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-----CCCeeecccCc
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-----GDPRLSCFGLM 220 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfg~a 220 (512)
+|||+.+ |.+|.++......+.++..++++|+.|++.+|.+||+.| ++||||||.|++++.. ..+.|.|||++
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 9999998 889999886555688999999999999999999999999 9999999999999854 45899999999
Q ss_pred c--ccC-C-----------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc
Q 010340 221 K--NSR-D-----------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM 286 (512)
Q Consensus 221 ~--~~~-~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~ 286 (512)
+ ... . ...+.||..|+++.+..+...+.+.|+||++.++.|++.|..|+..... ......+....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~-~~~~~~~~~~~ 253 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM-TDLKSKFEKDP 253 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc-cchHHHHHHHh
Confidence 8 311 1 1134589999999999999999999999999999999999866432211 00111111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
............+..+.++...+-..+...+|....+...|.....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 254 RKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred hhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 1111111122234456667777777899999999999998876543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=204.70 Aligned_cols=251 Identities=15% Similarity=0.159 Sum_probs=196.6
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.|.++||+|+||+.+.|++.- ++..||||.-.... +..++..|-+..+.| ..++|..+|-|..++.+-.||||
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~---nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLY---NNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ceeccccccCcceeeecccccc---cCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 4577899999999999999887 88999999976543 345788898888888 68999999999999988999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-----CCCeeecccCccccCC
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-----GDPRLSCFGLMKNSRD 225 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfg~a~~~~~ 225 (512)
++ |.+|.+++ +...+.|+..+++.++.|++.-++|+|++. +|+|||||+|+||+.- ..+.++|||+|+.+.+
T Consensus 105 LL-GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 105 LL-GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hh-CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 99 88999977 458889999999999999999999999999 9999999999999743 4589999999997654
Q ss_pred C-----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC-
Q 010340 226 G-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN- 293 (512)
Q Consensus 226 ~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (512)
. .+..||..||+-....|..-+.+.|+-|||-|++..|-|..|+.+-..+ -......++-+..-...
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-tnK~kYeKIGe~Kr~T~i 260 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-TNKEKYEKIGETKRSTPI 260 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-chHHHHHHhccccccCCH
Confidence 3 4567999999999999999999999999999999999999775432111 01111112111111111
Q ss_pred --CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 294 --FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 294 --~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+-...+.++..-+.-.-..+-.+-|..+-+...+..+.
T Consensus 261 ~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 261 EVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred HHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 11223556666777777778888898877666555443
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-26 Score=197.46 Aligned_cols=251 Identities=15% Similarity=0.112 Sum_probs=197.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+.++++||.|+||.+|.|.... +|..||||+-..... ..++.-|.++...|+ ...|..+..++.+...-.|||
T Consensus 16 ky~lvrkiGsGSFGdIy~~~~i~---~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 16 KYKLVRKIGSGSFGDIYLGISIT---SGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred ceEEEEeecCCchhheeeeeecc---CCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 57789999999999999999887 889999999876543 347888999999995 478999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCccccCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a~~~~~~ 226 (512)
+++ |.+|.+++.- ..+.++..+++.++-|++.-++|+|.++ +|||||||+|+|.+- ...+.|+|||+++.+.+.
T Consensus 91 dLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred ecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 999 8899998854 6778999999999999999999999999 999999999999963 356899999999876542
Q ss_pred -----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 227 -----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 227 -----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
....||..|.+-....+..-+.+.|+-|+|.+|....-|..|+.+- ......+....+........+.
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl-ka~tk~QKyEkI~EkK~s~~ie 246 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL-KAATKKQKYEKISEKKMSTPIE 246 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc-chhhHHHHHHHHHHhhcCCCHH
Confidence 3467899999998888888899999999999999999999765432 1111122222332222221111
Q ss_pred ---HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 296 ---SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 296 ---~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
...|.++.-.+.-|-...-++-|...-+.+.+.-+
T Consensus 247 ~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 247 VLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred HHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 22355677788889888888999887776655433
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=218.56 Aligned_cols=168 Identities=14% Similarity=0.033 Sum_probs=127.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---C--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---P--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
.|.+.+.||+|+||+||+|.+... ++..||||++..... . ....|.+|+++|++++|+||+..+.. .+..
T Consensus 19 ~Y~~~~~IG~G~fg~Vy~a~~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~ 93 (365)
T PRK09188 19 RFVETAVLKRDVFSTVERGYFAGD--PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKD 93 (365)
T ss_pred CceEccEEeecCcEEEEEEEEcCC--CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCc
Confidence 355677789999999999987642 456689998763311 1 13468999999999999999853322 2457
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccccc-CccceeecCCCCCeeecccCccccC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL-NAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
+|||||++|++|.. +. ... ...++.+++++|.|||+.+ |+|||| ||+|||++.++.+||+|||+++...
T Consensus 94 ~LVmE~~~G~~L~~-~~--~~~------~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 94 GLVRGWTEGVPLHL-AR--PHG------DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred EEEEEccCCCCHHH-hC--ccc------hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 99999999999963 21 111 1467889999999999999 999999 9999999999999999999998554
Q ss_pred CC------------CccccCcccCCcccccCCC------CCCCCcEE
Q 010340 225 DG------------KSYSTNLAYTPPEYLRNGR------VTPESVIF 253 (512)
Q Consensus 225 ~~------------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~ 253 (512)
.. ....+++.|++||.+.-.. .+..+|-|
T Consensus 164 ~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 164 RRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 32 2335678899999985432 33446666
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-23 Score=203.90 Aligned_cols=247 Identities=25% Similarity=0.302 Sum_probs=191.3
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCC-CccceEEEEeeCCeeEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHK-RLANLIGYCCDGDERLLV 148 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv 148 (512)
.++..||.|+||.||++.+. ..+++|.+....... ...+.+|+.++..+.|+ +|+++++++......+++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (384)
T COG0515 3 RILRKLGEGSFGEVYLARDR------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLV 76 (384)
T ss_pred eeEEeecCCCCeEEEEEEec------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEE
Confidence 45677899999999999986 458999998766543 56799999999999888 799999999877778999
Q ss_pred EEccCCCCHHhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeeecccCccccCC-
Q 010340 149 AEYMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRD- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~- 225 (512)
++++.+++|.+++..... ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||++.....
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 999999999977753211 27899999999999999999999999 99999999999999888 799999999874432
Q ss_pred ---------CCccccCcccCCcccccC---CCCCCCCcEEehHHHHHHHHhCCCCCChhhH---HHHhccchhhhccccc
Q 010340 226 ---------GKSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHAL---DMIRGKNILHLMDSHL 290 (512)
Q Consensus 226 ---------~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~---~~~~~~~~~~~~~~~~ 290 (512)
.....+|..|++||.+.+ ..++...|+||+|++++++++|..|+..... .......+........
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 245678999999999987 5788899999999999999999987443321 0000000111000001
Q ss_pred CCCCCH----HHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 291 EGNFSS----EEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 291 ~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...... .....+.+++..|+..+|..|.+..+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111111 112467899999999999999988877664
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-24 Score=215.92 Aligned_cols=228 Identities=19% Similarity=0.197 Sum_probs=192.8
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEEEEccCC
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
+|.|+||.|++++...+...++.+|+|++.+..... ......|..++..++ ||.+|++.-.+..+...+++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 599999999998877777688999999998765432 224566888898885 99999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCccccCcc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~~ 234 (512)
|.|...+. ....+++.....+...++-++.++|+.+ ++|||+|++||+++.+|++++.|||+++..-+....+||..
T Consensus 82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 99988886 4556778888888999999999999999 99999999999999999999999999988766666699999
Q ss_pred cCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCC
Q 010340 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEP 314 (512)
Q Consensus 235 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p 314 (512)
|||||++. ....++|.||||++.+||+||..||..+. ...+.. .....|...+..+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~--------~~~Il~--~~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDT--------MKRILK--AELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHH--------HHHHhh--hccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999997 67889999999999999999998875511 111111 2335677888889999999999999
Q ss_pred CCCCCh
Q 010340 315 RERPNT 320 (512)
Q Consensus 315 ~~Rps~ 320 (512)
..|.-.
T Consensus 227 ~nrLg~ 232 (612)
T KOG0603|consen 227 ENRLGA 232 (612)
T ss_pred HHHhcc
Confidence 999644
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=188.51 Aligned_cols=139 Identities=13% Similarity=0.108 Sum_probs=109.5
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---------hhH-----------------HHHHHHHHhcCC
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---------PKQ-----------------FADEAWGVGKLR 128 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---------~~~-----------------~~~E~~~l~~l~ 128 (512)
.+.||+|+||.||+|... +|+.||||+++...... ... ..+|++++.++.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~----~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05147 2 NGCISTGKEANVYHATTA----NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV 77 (190)
T ss_pred CCccccccceEEEEEECC----CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999985 67889999997653211 012 234999999998
Q ss_pred CCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCccccccCccceeec
Q 010340 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 129 h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~iiH~Dlkp~Nill~ 207 (512)
+++|.....+... ..+|||||++|++|...+. ....+++..+..++.|++.+|.|| |+.+ |+||||||+|||++
T Consensus 78 ~~~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~ 152 (190)
T cd05147 78 TAGIPCPEPILLK--SHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH 152 (190)
T ss_pred HCCCCCCcEEEec--CCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE
Confidence 8877544433222 2389999999987765432 346789999999999999999999 6888 99999999999998
Q ss_pred CCCCCeeecccCcccc
Q 010340 208 ENGDPRLSCFGLMKNS 223 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~ 223 (512)
++.++|+|||++...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999998754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-25 Score=227.72 Aligned_cols=246 Identities=17% Similarity=0.114 Sum_probs=182.5
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCcc--CCCCh----hHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH--AWPDP----KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
...+|.|++|.|+...... ..+.++.|..... ..... ..+..|..+-..+.|||++..+..+.+.....-+
T Consensus 323 ~~~~g~ga~g~~~~~~~~~---~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRS---DLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred cceeeecccCceEEEEecC---CCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence 3456999999888777665 3344555544321 11111 1266788888899999998888877776666666
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--- 225 (512)
||||++ +|+.++. ....++...+..++.|++.|+.|||+.| +.|||||++|++++.+|.+||+|||.+....-
T Consensus 400 mE~~~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 999999 9999996 3457888899999999999999999999 99999999999999999999999998764322
Q ss_pred -----CCccccCcccCCcccccCCCCCC-CCcEEehHHHHHHHHhCCCCCChhhHHHHh---ccchhhhcccccCCCCCH
Q 010340 226 -----GKSYSTNLAYTPPEYLRNGRVTP-ESVIFSFGTVLLDLLSGKHIPPSHALDMIR---GKNILHLMDSHLEGNFSS 296 (512)
Q Consensus 226 -----~~~~~~t~~y~aPE~~~~~~~~~-~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 296 (512)
....+|+-.|+|||++.+..|.+ ..||||.|+++..|++|+.|+......... .......-...-...+..
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS 555 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence 23467889999999999999977 579999999999999998775432111000 000000000001112234
Q ss_pred HHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 297 ~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..+.....+|.++|+.||.+|.|+.+|++.=
T Consensus 556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~ 586 (601)
T KOG0590|consen 556 LLPRETRIIIYRMLQLDPTKRITIEQILNDE 586 (601)
T ss_pred hchhhHHHHHHHHccCChhheecHHHHhhCh
Confidence 5667788999999999999999999998863
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-23 Score=190.04 Aligned_cols=168 Identities=14% Similarity=0.069 Sum_probs=130.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhH---------HHHHHHHHhcCCCCCccceEEEEee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---------FADEAWGVGKLRHKRLANLIGYCCD 141 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~ 141 (512)
.+.+++.+|.|+||.||+... ++..+|||++.......... +.+|+..+.++.|++|..+.+++..
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-----~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-----DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-----CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 466788899999999998654 23359999998665444332 6899999999999999999998764
Q ss_pred C--------CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCe
Q 010340 142 G--------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (512)
Q Consensus 142 ~--------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 213 (512)
. +..+|||||++|.+|.++.. +++ ....+|+.+|..||+.| ++|||+||+||+++.+| ++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EE
Confidence 3 35789999999999988742 332 24569999999999999 99999999999999888 99
Q ss_pred eecccCccccCCCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHH
Q 010340 214 LSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLL 263 (512)
Q Consensus 214 l~Dfg~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ell 263 (512)
|+|||........... ..++....+..++|+||||+++..+.
T Consensus 175 liDfg~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999987655322111 11334455778999999999887553
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-22 Score=181.11 Aligned_cols=141 Identities=15% Similarity=0.152 Sum_probs=112.4
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---------------------C-----hhHHHHHHHHHhcCC
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---------------------D-----PKQFADEAWGVGKLR 128 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~ 128 (512)
.+.||+|+||.||+|.+. +|+.||||+++..... . ...+.+|.+.+.++.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~----~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 2 NGCISTGKEANVYHARTG----DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred CceeecCCCcEEEEEEcC----CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999876 5788999999865321 0 112467899999999
Q ss_pred CCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeec
Q 010340 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 129 h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~ 207 (512)
|++|.....+.... .+|||||++|+++..... ....++...+..++.|++.+|.+||+ .+ |+||||||+|||++
T Consensus 78 ~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~ 152 (190)
T cd05145 78 EAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH 152 (190)
T ss_pred hCCCCCceEEEecC--CEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE
Confidence 99986555544332 489999999886543322 33567888999999999999999999 88 99999999999999
Q ss_pred CCCCCeeecccCccccCC
Q 010340 208 ENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~~ 225 (512)
++.++|+|||++.....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 88999999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=173.57 Aligned_cols=179 Identities=16% Similarity=0.124 Sum_probs=136.1
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh----hHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP----KQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~----~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 148 (512)
+...|++|+||+||.+.. .+..++.+.+....+-.. ..+.+|+++|++| .|++|++++++ +..+++
T Consensus 6 ~~~~l~~~~f~~v~~~~~-----~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lv 76 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-----GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLD 76 (218)
T ss_pred cceeecCCCcceEEEeec-----CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEE
Confidence 445679999999996655 345577777765554221 2588999999999 45889999986 346999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccccc-CccceeecCCCCCeeecccCccccCCCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL-NAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
|||+.|.+|.+.+. .. ...++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++.......
T Consensus 77 meyI~G~~L~~~~~---~~------~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 77 RSYLAGAAMYQRPP---RG------DLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred EeeecCccHHhhhh---hh------hHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 99999999876542 11 1347889999999999999 999999 7999999999999999999998554332
Q ss_pred c-----------------cccCcccCCcccccCC-CCC-CCCcEEehHHHHHHHHhCCCCCCh
Q 010340 228 S-----------------YSTNLAYTPPEYLRNG-RVT-PESVIFSFGTVLLDLLSGKHIPPS 271 (512)
Q Consensus 228 ~-----------------~~~t~~y~aPE~~~~~-~~~-~~~Dv~slG~~l~elltg~~~~~~ 271 (512)
. ...++.|++|+..... ..+ ...++++.|+-+|.++|++.+.+.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 1 0136778888765322 233 467889999999999999977554
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-21 Score=174.87 Aligned_cols=133 Identities=14% Similarity=0.065 Sum_probs=105.7
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-----CCCCccceEEEEeeCC---eeE-
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-----RHKRLANLIGYCCDGD---ERL- 146 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~- 146 (512)
..||+|+||.||. +.. +... +||++........+.+.+|+.+++.+ .||||++++|++.++. ..+
T Consensus 8 ~~LG~G~~~~Vy~--hp~---~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPE---DAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred ceecCCCceEEEE--CCC---CcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 3569999999995 544 4343 69998775545567899999999999 5799999999998863 434
Q ss_pred EEEEc--cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCccccccCccceeecC----CCCCeeecccC
Q 010340 147 LVAEY--MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEAL-DYCSSEGRPLYHDLNAYRVLFDE----NGDPRLSCFGL 219 (512)
Q Consensus 147 lv~E~--~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfg~ 219 (512)
+|||| +++|+|.+++.+ ..+++. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||+.
T Consensus 82 ~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 78999 667999999953 346655 35678888888 9999999 999999999999973 34799999544
Q ss_pred c
Q 010340 220 M 220 (512)
Q Consensus 220 a 220 (512)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-21 Score=181.81 Aligned_cols=228 Identities=18% Similarity=0.171 Sum_probs=147.6
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCC----------CCccceEEEEe-
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRH----------KRLANLIGYCC- 140 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h----------~niv~l~~~~~- 140 (512)
...||.|+++.||.+++.. +++.+|||++...... +.+++.+|.-....+.+ -.++-.++...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~---t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVE---TGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEETTEEEEEEEETT---TTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred ccccccCCceEEEEEEEcc---CCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 3467999999999999998 8899999998755432 23567777655555432 12222233222
Q ss_pred --------eC---C-----eeEEEEEccCCCCHHhhhhh---cCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 010340 141 --------DG---D-----ERLLVAEYMPNDTLAKHLFH---WEN--QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199 (512)
Q Consensus 141 --------~~---~-----~~~lv~E~~~~g~L~~~l~~---~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl 199 (512)
.. + ..+++|+-+. ++|.+++.- ... ..+....++.+..|+++.+++||+.| ++|+||
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi 171 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDI 171 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEeccc
Confidence 11 1 2467888884 488887642 122 23445566777899999999999999 999999
Q ss_pred CccceeecCCCCCeeecccCccccCCCCc-cccCcccCCcccccC--------CCCCCCCcEEehHHHHHHHHhCCCCCC
Q 010340 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKS-YSTNLAYTPPEYLRN--------GRVTPESVIFSFGTVLLDLLSGKHIPP 270 (512)
Q Consensus 200 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~elltg~~~~~ 270 (512)
||+|++++.+|.++|+||+.......... ...+..|.+||.... -.++.+.|.|+||+++|.|.+|+.|+.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 99999999999999999997765544333 344678999998733 247889999999999999999998764
Q ss_pred hhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCC
Q 010340 271 SHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRER 317 (512)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 317 (512)
....... .......+. ..++.+..||..+|+.||.+|
T Consensus 252 ~~~~~~~---------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 252 LSSPEAD---------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCGGGST---------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCcccc---------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 3211100 000112334 778889999999999999988
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-21 Score=203.84 Aligned_cols=245 Identities=18% Similarity=0.184 Sum_probs=175.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC-CCChhHHHH---HHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFAD---EAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
....+.||.+.|=.|.+|++.. |. |+||++-+.. ..+...|.+ |++ ...++|||++.+.-+-......||
T Consensus 25 ~~~~~~LGstRFlKv~r~k~~e----G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAyl 98 (1431)
T KOG1240|consen 25 CHYVENLGSTRFLKVARAKDRE----GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYL 98 (1431)
T ss_pred eeeecccCchhhhhhhhccCCC----ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHH
Confidence 4456778999999999999874 44 8999986554 333444444 444 445599999999988888888899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC---
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR--- 224 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~--- 224 (512)
|-+|+.+ +|+|.|. ...-+...+.+-|+.|++.||..+|..| |+|+|||.+||||+.-+-+.|+||...+..-
T Consensus 99 vRqyvkh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 99 VRQYVKH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHHHHhh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9999966 9999994 3344677788889999999999999999 9999999999999999999999998765321
Q ss_pred C-CC-------ccccCcccCCcccccC----------CC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh
Q 010340 225 D-GK-------SYSTNLAYTPPEYLRN----------GR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285 (512)
Q Consensus 225 ~-~~-------~~~~t~~y~aPE~~~~----------~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~ 285 (512)
+ .. +......|.|||-+.. .+ .+++-||||+||++.||++-..|++.- .+.+..+.....
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-SQL~aYr~~~~~ 253 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-SQLLAYRSGNAD 253 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-HHHHhHhccCcc
Confidence 1 11 1112346999998732 12 677899999999999999865554432 111211111000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
..+.+-..++ ...+..++..|++.||++|.++++.|+.-..+
T Consensus 254 ~~e~~Le~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 254 DPEQLLEKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred CHHHHHHhCc---CccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 0000000111 12477999999999999999999999875443
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.7e-21 Score=187.99 Aligned_cols=208 Identities=23% Similarity=0.333 Sum_probs=160.7
Q ss_pred HhcCCCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccc
Q 010340 124 VGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203 (512)
Q Consensus 124 l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~N 203 (512)
|+.+.|.|+.+++|.+.+++..++|.+||..|+|.+.+.. ....+++.-...++++|+.||.|||+.--..|+.|++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4678999999999999999999999999999999999975 567789999999999999999999988623899999999
Q ss_pred eeecCCCCCeeecccCccccCC------CCccccCcccCCcccccCCC-------CCCCCcEEehHHHHHHHHhCCCCCC
Q 010340 204 VLFDENGDPRLSCFGLMKNSRD------GKSYSTNLAYTPPEYLRNGR-------VTPESVIFSFGTVLLDLLSGKHIPP 270 (512)
Q Consensus 204 ill~~~~~~kl~Dfg~a~~~~~------~~~~~~t~~y~aPE~~~~~~-------~~~~~Dv~slG~~l~elltg~~~~~ 270 (512)
.++|..+.+||+|||+...... .....-..-|.|||.+.+.. .+.+.||||||++++|+++.+.||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 9999999999999999776532 11122345699999997642 4667999999999999999998876
Q ss_pred hhhHHHHhccchhhh---cccccCCCCC-H-HHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 271 SHALDMIRGKNILHL---MDSHLEGNFS-S-EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 271 ~~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
...........+..+ ....+++... . +..+.+..++..||..+|.+||++..+...+..+..
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 532211111111111 1111222222 1 344568899999999999999999999988876643
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-20 Score=169.52 Aligned_cols=113 Identities=19% Similarity=0.298 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHH
Q 010340 398 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 398 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
+....++.++.+|+-+++.++|++|+..|++||+++|+ ++.+|.|||.+|.++|+|+.|+++|+.||.+||.+.++|-+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 34566999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhchhhhhhcCCC
Q 010340 478 QAVALAKLDMHKDAADMLKEAASLEEKRQRSGRG 511 (512)
Q Consensus 478 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~~ 511 (512)
+|.+|+.+|+|++|++.|++||+|||.|..+|..
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~n 188 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNESYKSN 188 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcHHHHHH
Confidence 9999999999999999999999999999877653
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-20 Score=175.13 Aligned_cols=191 Identities=15% Similarity=0.163 Sum_probs=142.9
Q ss_pred CCCCccceEEEEeeC---------------------------CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHH
Q 010340 128 RHKRLANLIGYCCDG---------------------------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180 (512)
Q Consensus 128 ~h~niv~l~~~~~~~---------------------------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ 180 (512)
+|||||++.++|.+. ..+|+||...+. +|.+++. .+..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh---cCCCchHHHHHHHHH
Confidence 599999999987642 347899998865 8999994 455677777889999
Q ss_pred HHHHHHHHhcCCCccccccCccceee--cCCCC--CeeecccCccccCC----------CCccccCcccCCcccccCCC-
Q 010340 181 IAEALDYCSSEGRPLYHDLNAYRVLF--DENGD--PRLSCFGLMKNSRD----------GKSYSTNLAYTPPEYLRNGR- 245 (512)
Q Consensus 181 i~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~~--~kl~Dfg~a~~~~~----------~~~~~~t~~y~aPE~~~~~~- 245 (512)
+++|+.|||.++ |.|||+|.+|||+ |+++. +.|+|||.+--... .-...|.-.-||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999998 44544 67899997542221 11234567789999985432
Q ss_pred ----C-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCCh
Q 010340 246 ----V-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 320 (512)
Q Consensus 246 ----~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~ 320 (512)
. -.++|.|+.|.+.||+++...||+....-.....+.. +..-+..+..+++.+.+++...|+.||.+|++.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq----e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ----ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh----hhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 2 3489999999999999999999876332222222221 222334567778889999999999999999887
Q ss_pred HHHHHHh
Q 010340 321 KDLVSTL 327 (512)
Q Consensus 321 ~~vl~~L 327 (512)
.-....|
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 6555444
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-21 Score=186.33 Aligned_cols=236 Identities=18% Similarity=0.264 Sum_probs=158.0
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEE-------EEee-----CC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIG-------YCCD-----GD 143 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-------~~~~-----~~ 143 (512)
+..+.++++.++......+.+...++..+....+....-....+++-.+....|-+..-+.+ .+.. ..
T Consensus 250 k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~ 329 (516)
T KOG1033|consen 250 KSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKV 329 (516)
T ss_pred ccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccccccc
Confidence 34455666666655544433234455555544433222233444555555554444443333 1111 23
Q ss_pred eeEEEEEccCCCCHHhhhhhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHW-ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
.++|.|++|...+|.+||.++ .....++...+.++.|++.|+.| ++ .+|+|+||.||++..+..+||+|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheee
Confidence 578999999999999999743 34457888999999999999999 77 99999999999999999999999998764
Q ss_pred cCC----------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhC-CCCCChhhHHHHhccchhhhcccccC
Q 010340 223 SRD----------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-KHIPPSHALDMIRGKNILHLMDSHLE 291 (512)
Q Consensus 223 ~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (512)
... .+...||..||+||.+.+..|+.++||||||++|+|+++- ...+ ........+-+..+.
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~-------er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF-------ERIATLTDIRDGIIP 478 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH-------HHHHhhhhhhcCCCC
Confidence 332 2345789999999999999999999999999999999972 1111 111222222222222
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHH
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~v 323 (512)
+.+..+.+. -..|+.+++...|.+||++.+.
T Consensus 479 ~~~~~d~p~-e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 479 PEFLQDYPE-EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hHHhhcCcH-HHHHHHHhcCCCcccCchHHHH
Confidence 222222222 3479999999999999965544
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.9e-20 Score=194.24 Aligned_cols=238 Identities=16% Similarity=0.141 Sum_probs=173.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC---CCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR---HKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 148 (512)
+.|-++||+|+||.||+|... +++.||+|+-++...- +|.--.+++.+|+ -+-|..+...+.-.+.-+||
T Consensus 700 ~~I~~e~G~g~y~~vy~a~~~----~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 700 FCISKEIGEGSYGSVYVATHS----NGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred EEEEeeeccccceEEEEeecC----CCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 345668899999999999987 5888999998754421 2444445556665 23455555555566778899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-------CCCCeeecccCcc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-------NGDPRLSCFGLMK 221 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-------~~~~kl~Dfg~a~ 221 (512)
+||.+.|||.+++. ..+.++|..+..+..|++.-+..||..+ |||+||||+|+||.. .-.++|+|||.+-
T Consensus 773 ~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 773 SEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 99999999999997 6778999999999999999999999999 999999999999942 3458999999875
Q ss_pred c---cCCCCc---cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 222 N---SRDGKS---YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 222 ~---~~~~~~---~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
. ..+... .++|-.+--+|+..|.+++...|.|.|..+++-||.|+..- ..++...... ..++.-+.
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~-~~~~Ry~~ 921 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVK-TNFPRYWK 921 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceecc-ccchhhhh
Confidence 3 334433 35688899999999999999999999999999999998431 1111111111 11222222
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+... +|...+|..|-..=|...++...++.+
T Consensus 922 ~~~W~---~~F~~lLN~~~~~~p~l~~lr~~~~~~ 953 (974)
T KOG1166|consen 922 RDMWN---KFFDLLLNPDCDTLPNLQELRTELEEV 953 (974)
T ss_pred HHHHH---HHHHHHhCcCcccchhHHHHHHHHHHH
Confidence 33333 566667774444447777777766654
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-19 Score=167.59 Aligned_cols=143 Identities=17% Similarity=0.161 Sum_probs=111.1
Q ss_pred ccccccCCCCCCCeEEEEE-EcCCCCCceEEEEEecCccCCC-------------------C-----hhHHHHHHHHHhc
Q 010340 72 DFIVSESGEKAPNVVYKGR-LQDGNDNRRWIAVKKFTKHAWP-------------------D-----PKQFADEAWGVGK 126 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~-~~~~~~~~~~vavK~~~~~~~~-------------------~-----~~~~~~E~~~l~~ 126 (512)
+.+.+.||.|+||.||+|. +.. +++.||||+++..... . ...+.+|+.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~---~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDG---SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCC---CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 4567789999999999998 444 7888999998754311 0 0235689999999
Q ss_pred CCCC--CccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccce
Q 010340 127 LRHK--RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204 (512)
Q Consensus 127 l~h~--niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Ni 204 (512)
+.+. .+.+++++ ...+|||||++|++|..... ....+.......++.||+.+|.+||+.+.++|+||||+||
T Consensus 107 L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NI 180 (237)
T smart00090 107 LYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNI 180 (237)
T ss_pred HHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhE
Confidence 9753 34444543 23589999999988876553 2345666677899999999999999987699999999999
Q ss_pred eecCCCCCeeecccCccccC
Q 010340 205 LFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 205 ll~~~~~~kl~Dfg~a~~~~ 224 (512)
+++ ++.++|+|||.+....
T Consensus 181 li~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEE-CCCEEEEEChhhhccC
Confidence 999 8899999999987543
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4e-19 Score=163.59 Aligned_cols=134 Identities=18% Similarity=0.183 Sum_probs=112.8
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--------hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+.||+|++|.||+|.+ .+..|+||+........ ...+.+|+.++..+.|++|+....++.+....++
T Consensus 2 ~~l~~G~~~~vy~~~~-----~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-----LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFII 76 (211)
T ss_pred cccccCceEEEEEEee-----CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEE
Confidence 4679999999999987 34458999866443221 1357889999999999999888888877888999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
||||++|++|.+++... .+ .+..++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++|+|||.+..
T Consensus 77 v~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 77 VMEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999998531 12 78889999999999999999 99999999999999 78899999998754
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-20 Score=191.09 Aligned_cols=200 Identities=19% Similarity=0.162 Sum_probs=143.8
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEcc
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 152 (512)
+.|+.|-.|+||.||.++++. +.+.+|+|+ ++... -+++ ++.....|.+|
T Consensus 86 ~~IklisngAygavylvrh~~---trqrfa~ki-Nkq~l----ilRn---ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 86 NTIKLISNGAYGAVYLVRHKE---TRQRFAMKI-NKQNL----ILRN---ILTFAGNPFVV------------------- 135 (1205)
T ss_pred ceeEeeccCCCCceeeeeccc---cccchhhcc-cccch----hhhc---cccccCCccee-------------------
Confidence 367888999999999999987 778899944 43221 0111 23333344443
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-------
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD------- 225 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~------- 225 (512)
|+=...+. ..+.++.. .+.+++|||+.+ |+|||+||+|.||+.-|++|++|||+.+....
T Consensus 136 --gDc~tllk--~~g~lPvd--------mvla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 136 --GDCATLLK--NIGPLPVD--------MVLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred --chhhhhcc--cCCCCcch--------hhHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 33334443 22334322 267899999999 99999999999999999999999998763211
Q ss_pred ------------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 226 ------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 226 ------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
.+..+||+.|+|||++....|+...|+|++|+|+||.+-|..||+.+..+...+.-+...+ ..++
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i---~wpE 279 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI---EWPE 279 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc---cccc
Confidence 1245789999999999999999999999999999999999999887744433333222211 1112
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCC
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERP 318 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rp 318 (512)
-....++++++++.++|+.+|..|-
T Consensus 280 ~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 280 EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 2344566789999999999999994
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=159.06 Aligned_cols=129 Identities=18% Similarity=0.230 Sum_probs=106.3
Q ss_pred CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--------hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 78 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
||+|+||.||+|.+ ++..|++|+........ .+++.+|++++..+.|+++.....++......++||
T Consensus 2 ig~G~~~~vy~~~~-----~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 76 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-----LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVM 76 (199)
T ss_pred CCCCceEEEEEeec-----CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
Confidence 69999999999985 45669999865432211 245778999999999888766666666777789999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
||++|++|.+++.. .. . .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 77 e~~~g~~l~~~~~~--~~-~------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 77 EYIEGKPLKDVIEE--GN-D------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEECCccHHHHHhh--cH-H------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999998852 11 1 78999999999999999 99999999999999 88999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.5e-18 Score=178.70 Aligned_cols=132 Identities=20% Similarity=0.194 Sum_probs=107.8
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--------ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
.+.||+|+||.||+|.+.. . .+++|+....... ..+.+.+|++++..++|++|+....++.+....+
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~---~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLG---R--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cceeccCCcEEEEEEeecC---c--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 4667999999999998754 2 2444432211111 1246889999999999999999888888877889
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
+||||++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ .++.++|+|||+++..
T Consensus 413 lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999999884 35678999999999999999 9999999999999 6789999999998653
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.3e-18 Score=154.90 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=107.0
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC----------------------ChhHHHHHHHHHhcCCC
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP----------------------DPKQFADEAWGVGKLRH 129 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h 129 (512)
+.+...||.|+||.||++... +++.||||++...... ....+.+|+.++..+.|
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP----DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred hhcCCccccCcceEEEEEEcC----CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 345677899999999999875 6778999987653210 01236788999999977
Q ss_pred C--CccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec
Q 010340 130 K--RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 130 ~--niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~ 207 (512)
+ .++..++. ...++||||++|++|..+.. . .....++.+++.++.++|+.+ ++|+||||+||+++
T Consensus 93 ~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~---~-----~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~ 159 (198)
T cd05144 93 EGFPVPKPIDW----NRHAVVMEYIDGVELYRVRV---L-----EDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVD 159 (198)
T ss_pred cCCCCCceeec----CCceEEEEEeCCcchhhccc---c-----ccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEc
Confidence 7 45555542 34589999999999876542 0 235678899999999999998 99999999999999
Q ss_pred CCCCCeeecccCccccCC
Q 010340 208 ENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~~ 225 (512)
.++.++|+|||++.....
T Consensus 160 ~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 160 DDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCcEEEEECCccccCCC
Confidence 999999999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-17 Score=143.42 Aligned_cols=136 Identities=14% Similarity=0.012 Sum_probs=113.5
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCC--CCccceEEEEeeCCeeEEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH--KRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+++.||.|.++.||++.... ..++||....... ...+.+|+.++..++| .+++++++++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-----~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-----EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC-----CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35678999999999999842 5699999876543 4679999999999976 5999999999888889999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CccccccCccceeecCCCCCeeecccCccccCC
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++++.+..+ +......++.+++.+|.+||... +++|+|++|+|||++..+.++++|||.+.....
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPP 141 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence 998776543 55667778999999999999852 399999999999999989999999998865443
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-18 Score=180.35 Aligned_cols=252 Identities=17% Similarity=0.143 Sum_probs=189.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC--CCChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+|+.|-....... ....+|+|.+.... ....+....|..+-..+. |+|++.+++...+....++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~--~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRD--PESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccchhhhhhhcCC--CcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 455667789999999988776443 45667888877554 122345566888888886 9999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCccccccCccceeecCCC-CCeeecccCccccCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS-SEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRD 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~ 225 (512)
+++|..|+++.+.+........+....-.++.|+..+|.|+| ..+ +.|+||||+|.+++..+ .+++.|||+|.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999883222225666677789999999999999 888 99999999999999999 999999999976554
Q ss_pred -CC------cccc-CcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc--CCCC
Q 010340 226 -GK------SYST-NLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL--EGNF 294 (512)
Q Consensus 226 -~~------~~~~-t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 294 (512)
.. ..+| ++.|+|||...+.. .....|+||.|+++.-+++|..|+....... .....+..... ....
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~ 254 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLP 254 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCc
Confidence 21 3457 99999999998754 4678899999999999999997754322111 11111111111 1122
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.........+++.+++..+|..|.+.+++...-+
T Consensus 255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~ 288 (601)
T KOG0590|consen 255 WNSISDQAHDLLHKILKENPSNRLSIEELKLDNW 288 (601)
T ss_pred cccCChhhhhcccccccCCchhcccccccccccc
Confidence 2344455778999999999999999988766543
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.7e-17 Score=149.77 Aligned_cols=133 Identities=15% Similarity=0.093 Sum_probs=102.7
Q ss_pred CC-CCCCCeEEEEEEcCCCCCceEEEEEecCccCC-------------CChhHHHHHHHHHhcCCCCCc--cceEEEEee
Q 010340 78 SG-EKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-------------PDPKQFADEAWGVGKLRHKRL--ANLIGYCCD 141 (512)
Q Consensus 78 lG-~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~ 141 (512)
|| .||.|+||.+... +..++||.+..... .....+.+|+.++.+|.|++| +..+++...
T Consensus 39 lg~~~g~gtv~~v~~~-----~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-----GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred eecCCCCccEEEEEeC-----CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 46 7788889998774 45589988753211 123468899999999998875 777777544
Q ss_pred CCe----eEEEEEccCC-CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeec
Q 010340 142 GDE----RLLVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSC 216 (512)
Q Consensus 142 ~~~----~~lv~E~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~D 216 (512)
... .++|||+++| .+|.+++. ...++.. .+.+|+.+|.+||+.| |+|+||||.|||++.++.++|+|
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~----~~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQ---EAPLSEE----QWQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHh---cCCCCHH----HHHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEE
Confidence 322 3599999997 69998884 2345554 3568999999999999 99999999999999989999999
Q ss_pred ccCcccc
Q 010340 217 FGLMKNS 223 (512)
Q Consensus 217 fg~a~~~ 223 (512)
||.+...
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9987654
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=144.44 Aligned_cols=137 Identities=18% Similarity=0.145 Sum_probs=97.9
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhH----------------------HHHHHHHHhcCCCC
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQ----------------------FADEAWGVGKLRHK 130 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~ 130 (512)
.+.||+|+||.||+|.+. +++.||||++....... ... ...|...+..+.+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~----~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDG----DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA 77 (187)
T ss_pred CcccccccceeEEEEECC----CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence 456899999999999876 56789999987543211 111 13566666666433
Q ss_pred --CccceEEEEeeCCeeEEEEEccCCCCHHh-hhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceee
Q 010340 131 --RLANLIGYCCDGDERLLVAEYMPNDTLAK-HLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLF 206 (512)
Q Consensus 131 --niv~l~~~~~~~~~~~lv~E~~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill 206 (512)
.+.+.++. ...++||||++++++.. .+.. .... ..+..++.+++.++.++|. .+ ++|+||||+||++
T Consensus 78 ~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili 148 (187)
T cd05119 78 GVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILV 148 (187)
T ss_pred CCCCCceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEE
Confidence 34455543 23689999999954322 1211 0111 5678899999999999999 88 9999999999999
Q ss_pred cCCCCCeeecccCccccCC
Q 010340 207 DENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 207 ~~~~~~kl~Dfg~a~~~~~ 225 (512)
+ ++.++|+|||.+.....
T Consensus 149 ~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 149 D-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred E-CCcEEEEECcccccccC
Confidence 9 89999999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.6e-16 Score=131.41 Aligned_cols=106 Identities=13% Similarity=0.058 Sum_probs=101.4
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+...|..+++.|+|++|+..|++++..+|. +..+|+++|.++..+|++++|+..|+++++++|+++.+++++|.++
T Consensus 24 p~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l 102 (144)
T PRK15359 24 PETVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCL 102 (144)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 445777899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
..+|++++|+..|+++++++|++..+|
T Consensus 103 ~~~g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 103 KMMGEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999987765
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.6e-15 Score=125.49 Aligned_cols=111 Identities=17% Similarity=0.289 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC----hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS----PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 475 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 475 (512)
...+..++..|+.+|+.|+|++|...|..||++.|... ..+|.|+|.|+++++.++.||.+|.+||+++|.+.+|.
T Consensus 92 ~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~kAl 171 (271)
T KOG4234|consen 92 IEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEKAL 171 (271)
T ss_pred HHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHHHH
Confidence 56688999999999999999999999999999988732 46799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 476 YMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 476 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
.++|.+|.++..|++|+.+|++.+++||.+..+.+
T Consensus 172 ~RRAeayek~ek~eealeDyKki~E~dPs~~ear~ 206 (271)
T KOG4234|consen 172 ERRAEAYEKMEKYEEALEDYKKILESDPSRREARE 206 (271)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHHHH
Confidence 99999999999999999999999999999887654
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.6e-15 Score=144.34 Aligned_cols=106 Identities=24% Similarity=0.404 Sum_probs=102.3
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.+...+.+|+.+|+.|+|.+|+..|++||+.+|+ ++.+|.|||.||.+++++..|+.+++++|+++|++.++|++.|.+
T Consensus 357 ~A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~a 435 (539)
T KOG0548|consen 357 KAEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAA 435 (539)
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 3777888999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+..+.+|+.|++.|.+++++||++..+
T Consensus 436 l~~mk~ydkAleay~eale~dp~~~e~ 462 (539)
T KOG0548|consen 436 LRAMKEYDKALEAYQEALELDPSNAEA 462 (539)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhHHH
Confidence 999999999999999999999998764
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.2e-15 Score=147.38 Aligned_cols=241 Identities=21% Similarity=0.220 Sum_probs=181.0
Q ss_pred ccccCCC--CCCCeEEEEEE--cCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 74 IVSESGE--KAPNVVYKGRL--QDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 74 ~i~~lG~--G~~g~Vy~~~~--~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
+.+.+|. |.+|.||.+.. .. ++..+|+|.-+.... .....=.+|+.....+ .|+|.|+.+..+...+..+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~---s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSE---SPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred cccccccCCCCCceeecccCCccc---CCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4567799 99999999988 44 778899998543322 2334456688888888 6999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCccccccCccceeecCC-CCCeeecccCcc
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE----ALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMK 221 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~a~ 221 (512)
+-+|++. .+|..+.+. ....++....+.+..+... ||..+|+.+ ++|-|+||.||++..+ ...+++|||+..
T Consensus 195 iqtE~~~-~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred eeecccc-chhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeE
Confidence 9999994 688888763 3344788888889999999 999999999 9999999999999988 789999999987
Q ss_pred ccCCCC---------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC
Q 010340 222 NSRDGK---------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 222 ~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
.+.+.. ...+...|++||... +.++..+|+|++|.++.+..++..++.......| .++-...+..
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W-----~~~r~~~ip~ 345 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSW-----SQLRQGYIPL 345 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCc-----cccccccCch
Confidence 665432 124567799999985 5788899999999999999999876543211111 1111111111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
++-..-+..+...+..+++.+|..|++.+.++++
T Consensus 346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 2222223344558889999999999998887764
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.7e-15 Score=145.99 Aligned_cols=108 Identities=22% Similarity=0.387 Sum_probs=103.8
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+..+|+.++..|+|+.|+..|++||.++|. +...|.|+..||..+|+|++|+++..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 457889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcCCC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSGRG 511 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~~~ 511 (512)
..+|+|++|+..|.++|++||+|.....|
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~~L~~g 109 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNKQLKTG 109 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchHHHHHh
Confidence 99999999999999999999999876554
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3e-14 Score=119.51 Aligned_cols=101 Identities=16% Similarity=0.033 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
++.+.++..|..++..|++++|+..|+-...+||. +...|+++|.|+..+|+|.+||..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhch
Q 010340 481 ALAKLDMHKDAADMLKEAASLE 502 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~ 502 (512)
|++.+|+.+.|++.|+.|+...
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999887
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-14 Score=142.82 Aligned_cols=105 Identities=27% Similarity=0.349 Sum_probs=100.7
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
..+..+|..++..|+|++|+..|++||+++|. +..+|+++|.+|+.+|++++|+.++++|++++|+++.+|+++|.+++
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 484 KLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 484 ~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.+|+|++|+..|+++++++|++..+.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~~~~ 107 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDSRFT 107 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999987653
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-14 Score=136.86 Aligned_cols=112 Identities=21% Similarity=0.256 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC--------------ChHHHhhhHHHhhhcCChHHHHHHHHH
Q 010340 398 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--------------SPTVYARRSLCHLMCDQPDAALRDAMQ 463 (512)
Q Consensus 398 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~ 463 (512)
..+..+...++.|+.+|+.|+|..|+..|++|+..-... -..+++|+|.||+++++|.+|+..|.+
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 567789999999999999999999999999998642211 135799999999999999999999999
Q ss_pred HHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 464 AQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 464 al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|+++|+|.+|+|++|.|+..+|+|+.|+.+|++|++++|.|..+.
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~~ 328 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAAR 328 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999999999999999999999997654
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-14 Score=146.25 Aligned_cols=140 Identities=19% Similarity=0.166 Sum_probs=98.4
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--------------------------h--------------h
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------------------------P--------------K 115 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--------------------------~--------------~ 115 (512)
..||.|++|+||+|+.+ +|+.||||+.++..... . -
T Consensus 123 ~plasaSigQVh~A~l~----~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 198 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV----DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL 198 (437)
T ss_pred cceeeeehhheEEEEec----CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence 46899999999999987 67789999987642110 0 0
Q ss_pred HHHHHHHHHhcCC----CCCccceEEEEe-eCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHH-HHHHHh
Q 010340 116 QFADEAWGVGKLR----HKRLANLIGYCC-DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE-ALDYCS 189 (512)
Q Consensus 116 ~~~~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~-~L~~LH 189 (512)
+|.+|+..+.++. |.+-+.+-.++. ..+..+|||||++|++|.++..... ...+ +..++..++. .+..+|
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVL 274 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHH
Confidence 2555666555552 333233333332 2345789999999999988774311 1222 3446666665 468889
Q ss_pred cCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 190 ~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
..| ++|+|+||.||+++.++.++++|||++....
T Consensus 275 ~~g-~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 RDG-FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred hCC-ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 998 9999999999999999999999999986543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-14 Score=132.93 Aligned_cols=107 Identities=23% Similarity=0.305 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
+....+++++|+.||++|+|++||++|.++|..+|. ++.+|.|||.+|+++++|..|..+|..|+.++-.+.+||-++|
T Consensus 94 L~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~ 172 (536)
T KOG4648|consen 94 LKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRM 172 (536)
T ss_pred HHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHH
Confidence 355677999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
.+...+|+.+||.++|+.+|+|+|++..
T Consensus 173 ~AR~~Lg~~~EAKkD~E~vL~LEP~~~E 200 (536)
T KOG4648|consen 173 QARESLGNNMEAKKDCETVLALEPKNIE 200 (536)
T ss_pred HHHHHHhhHHHHHHhHHHHHhhCcccHH
Confidence 9999999999999999999999998654
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.1e-15 Score=134.30 Aligned_cols=196 Identities=18% Similarity=0.225 Sum_probs=141.2
Q ss_pred HHHhcCCCCCccceEEEEeeC-----CeeEEEEEccCCCCHHhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCC-C
Q 010340 122 WGVGKLRHKRLANLIGYCCDG-----DERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEG-R 193 (512)
Q Consensus 122 ~~l~~l~h~niv~l~~~~~~~-----~~~~lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~-~ 193 (512)
.-+-.+-|.|||+++.|+.+. ....+++||+..|+|..+|++.. ...+......+|+.||+.||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 344555799999999998754 45789999999999999998642 345777888899999999999999987 5
Q ss_pred ccccccCccceeecCCCCCeeecccCccc------c--CCCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhC
Q 010340 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKN------S--RDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG 265 (512)
Q Consensus 194 iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~------~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg 265 (512)
|+|+++..+-|++..+|-+|++---.... . .......+.++|.+||.-.....+.++|||+||+..+||..|
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 78889999999999998888764221110 0 011223456899999998878889999999999999999988
Q ss_pred CCCCChhhHH---HHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 266 KHIPPSHALD---MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 266 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..-+...... .....+........+ =..++.+|++-.|..||++.+++-|.-
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~~len~l-----------qr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVIIGLENGL-----------QRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred eeccCCCcceeehhhhhhhheeeccCcc-----------ccCcCcccccCCCCCCcchhhhhcCce
Confidence 7432211000 011111111111111 125788999999999999999987743
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.4e-13 Score=131.34 Aligned_cols=105 Identities=15% Similarity=0.010 Sum_probs=101.4
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
..+..++.+|..+...|++++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
+++..|++++|+++|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999875
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.1e-14 Score=146.82 Aligned_cols=139 Identities=17% Similarity=0.123 Sum_probs=94.0
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--------------------------Ch--------------h
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------------------------DP--------------K 115 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------------------------~~--------------~ 115 (512)
..+|.|++|+||+|++++ +|+.||||+.++.... +. -
T Consensus 125 ~PlasaSiaQVh~A~l~~---~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~El 201 (537)
T PRK04750 125 KPLASASIAQVHFARLKD---NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDEL 201 (537)
T ss_pred hhhcCCCccEEEEEEECC---CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhh
Confidence 678999999999999986 5888999999865210 00 1
Q ss_pred HHHHHHHHHhcCC----CCCccceEEEEee-CCeeEEEEEccCCCCHHhhhhhcCCC----CCCHHHHHHHHHHHHHHHH
Q 010340 116 QFADEAWGVGKLR----HKRLANLIGYCCD-GDERLLVAEYMPNDTLAKHLFHWENQ----TIEWAMRLRVALYIAEALD 186 (512)
Q Consensus 116 ~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~----~l~~~~~~~i~~~i~~~L~ 186 (512)
++.+|+..+.++. +.+.+.+-.++.+ ....+|||||++|+.|.++-.-...+ .+....+..++.||+
T Consensus 202 D~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif---- 277 (537)
T PRK04750 202 DLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF---- 277 (537)
T ss_pred CHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH----
Confidence 2455555555442 4444444444433 45578999999999998753211111 233333444444443
Q ss_pred HHhcCCCccccccCccceeecCCC----CCeeecccCccccCC
Q 010340 187 YCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLMKNSRD 225 (512)
Q Consensus 187 ~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg~a~~~~~ 225 (512)
..| ++|+|+||.||+++.++ .+++.|||++.....
T Consensus 278 ---~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 ---RDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ---hCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 467 99999999999999888 999999999866543
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.4e-13 Score=115.54 Aligned_cols=107 Identities=12% Similarity=0.165 Sum_probs=102.2
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++.....+|..+++.|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++..++.+|.
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~ 93 (135)
T TIGR02552 15 EQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAE 93 (135)
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 45677889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
++..+|++++|+..|+++++++|++...
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~p~~~~~ 121 (135)
T TIGR02552 94 CLLALGEPESALKALDLAIEICGENPEY 121 (135)
T ss_pred HHHHcCCHHHHHHHHHHHHHhccccchH
Confidence 9999999999999999999999987653
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.5e-13 Score=132.14 Aligned_cols=97 Identities=22% Similarity=0.372 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
..+-+.+++.+|+-+|+.|+|++||++|++||++.|+ .+..|.||+.||..+|+|++.++++.+|++++|++.++++++
T Consensus 111 ~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RR 189 (606)
T KOG0547|consen 111 RLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRR 189 (606)
T ss_pred HHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHH
Confidence 3566899999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHH
Q 010340 479 AVALAKLDMHKDAADMLK 496 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~ 496 (512)
+.++.++|++++|+.+..
T Consensus 190 A~A~E~lg~~~eal~D~t 207 (606)
T KOG0547|consen 190 ASAHEQLGKFDEALFDVT 207 (606)
T ss_pred HHHHHhhccHHHHHHhhh
Confidence 999999999999998764
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.1e-13 Score=120.75 Aligned_cols=128 Identities=16% Similarity=0.080 Sum_probs=95.9
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCc-cceEEEEeeCCeeEEEEEccC
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL-ANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~~ 153 (512)
++.++.|.++.||++.. .+..|++|....... ....+.+|+.++..+.+.++ .+++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~-----~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV-----ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE-----CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 45678999999999986 356699999865432 22357889999999865554 45555443 34589999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCC----ccccccCccceeecCCCCCeeecccCcc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR----PLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
|.++...- . ....++.+++++|..||..+. ++|+|++|.||+++ ++.++++|||.+.
T Consensus 75 G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98775421 1 113356799999999999871 49999999999999 6789999999865
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-12 Score=118.46 Aligned_cols=106 Identities=13% Similarity=0.100 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHh-hhcCC--hHHHHHHHHHHHhhCCCcHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCH-LMCDQ--PDAALRDAMQAQCVYPDWSTAFY 476 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~al~~~p~~~~~~~ 476 (512)
.+++..+..+|..+...|++++|+..|++|++++|+ +..++.++|.++ ...|+ +++|+..++++++++|+++.+++
T Consensus 70 P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~ 148 (198)
T PRK10370 70 PQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALM 148 (198)
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHH
Confidence 356888999999999999999999999999999999 999999999985 77787 59999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 477 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
++|.+++.+|+|++|+..|+++++++|.+.
T Consensus 149 ~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 149 LLASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 999999999999999999999999999754
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-13 Score=137.58 Aligned_cols=243 Identities=16% Similarity=0.113 Sum_probs=178.9
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChh--HHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK--QFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+..||.|.|+.|+....... ++..|++|.+......... .-..|+-+...+ .|.+++..+..|......++=-|
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~--~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e 346 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPE--GDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE 346 (524)
T ss_pred eeEEccCCccccceeeeecCC--CCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence 567889999999999885422 6788999998876554432 234577777666 69999999988888888889999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-CCCeeecccCccccCCCC-c
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKNSRDGK-S 228 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~-~ 228 (512)
||.++++...+. ....+++..++++..|++.++.++|+.. ++|+|+||+||++..+ +..+++|||....+.... .
T Consensus 347 ~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~ 423 (524)
T KOG0601|consen 347 FCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGV 423 (524)
T ss_pred hhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceeccc
Confidence 999998876663 4556888889999999999999999998 9999999999999876 788999999886532222 1
Q ss_pred ccc-Cccc-CCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 229 YST-NLAY-TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 229 ~~~-t~~y-~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
... +..| .++.......+..+.|++|||..+.+.+++....+. ......+... .....+... ..+..+.
T Consensus 424 ~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-------~~~~~~i~~~-~~p~~~~~~-~~~q~~~ 494 (524)
T KOG0601|consen 424 FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-------GVQSLTIRSG-DTPNLPGLK-LQLQVLL 494 (524)
T ss_pred ccccccccccchhhccccccccccccccccccccccccCcccCcc-------cccceeeecc-cccCCCchH-Hhhhhhh
Confidence 222 3334 244445556688999999999999999999864322 1122222111 111222222 6677888
Q ss_pred HHhhccCCCCCCChHHHHHHhccc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
..++..++..||.+.++..+....
T Consensus 495 kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 495 KVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhcCCccccchhhhhhcccchhh
Confidence 899999999999998887765543
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-12 Score=131.44 Aligned_cols=168 Identities=14% Similarity=0.149 Sum_probs=129.5
Q ss_pred EEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCC
Q 010340 88 KGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ 167 (512)
Q Consensus 88 ~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~ 167 (512)
.|..+. ++.+|.|...+.....-.....+-++-|+.++||||+++++.++..+..|||+|-+. .|..++..
T Consensus 30 ~~t~k~---~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~---- 100 (690)
T KOG1243|consen 30 DGTRKA---DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE---- 100 (690)
T ss_pred ccceec---cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH----
Confidence 455555 677888888876654223557788999999999999999999999999999999985 57777753
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC----ccccCcccCCcccccC
Q 010340 168 TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK----SYSTNLAYTPPEYLRN 243 (512)
Q Consensus 168 ~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~~t~~y~aPE~~~~ 243 (512)
+....+...+.||+.||.|||+.+.++|++|.-..|+++..|..||++|-++....... ....-..|..|+.+..
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 33556666788999999999976669999999999999999999999998775443322 1122234666766532
Q ss_pred CCCCCCCcEEehHHHHHHHHhCCC
Q 010340 244 GRVTPESVIFSFGTVLLDLLSGKH 267 (512)
Q Consensus 244 ~~~~~~~Dv~slG~~l~elltg~~ 267 (512)
. +-..|.|.|||+++|++.|..
T Consensus 180 s--~~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 180 S--EWSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred c--ccchhhhhHHHHHHHHhCccc
Confidence 2 245699999999999999943
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.9e-13 Score=131.24 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=98.7
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+.+...+|.++-++|++++|+.+|++||.++|. .+++|.|+|..|-.+|+..+|+.+|.+||.++|.+++|+.++|.+|
T Consensus 388 aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLasi~ 466 (966)
T KOG4626|consen 388 AAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLASIY 466 (966)
T ss_pred hhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHHHh
Confidence 777888999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
...|+..+|+..|++||+|+|+...|.
T Consensus 467 kDsGni~~AI~sY~~aLklkPDfpdA~ 493 (966)
T KOG4626|consen 467 KDSGNIPEAIQSYRTALKLKPDFPDAY 493 (966)
T ss_pred hccCCcHHHHHHHHHHHccCCCCchhh
Confidence 999999999999999999999877664
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.41 E-value=2e-12 Score=115.00 Aligned_cols=141 Identities=11% Similarity=0.113 Sum_probs=102.2
Q ss_pred cccCCCCCCCeEEEEEEcCC---CCCceEEEEEecCccCCC---------------------C-hhH----HHHHHHHHh
Q 010340 75 VSESGEKAPNVVYKGRLQDG---NDNRRWIAVKKFTKHAWP---------------------D-PKQ----FADEAWGVG 125 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~---~~~~~~vavK~~~~~~~~---------------------~-~~~----~~~E~~~l~ 125 (512)
.+.||.|.-+.||.|...++ ...+..+|||+.+..... + .+. ..+|++.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 46789999999999986531 112467999998643210 0 112 338999999
Q ss_pred cCC--CCCccceEEEEeeCCeeEEEEEccCCCCHHh-hhhhcCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCccccccCc
Q 010340 126 KLR--HKRLANLIGYCCDGDERLLVAEYMPNDTLAK-HLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNA 201 (512)
Q Consensus 126 ~l~--h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~iiH~Dlkp 201 (512)
++. .-++..++++ ..-+|||||+.++.+.. .+ ....++......+..+++.+|..| |..+ +||+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCH
Confidence 994 3577777765 34689999997654422 23 223455566777889999999999 7888 99999999
Q ss_pred cceeecCCCCCeeecccCccccC
Q 010340 202 YRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 202 ~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.|||++ ++.+.|+|||.+....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.1e-13 Score=133.19 Aligned_cols=106 Identities=18% Similarity=0.162 Sum_probs=89.3
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+++|+.+|+++-..+.|++|+.+|.+|+.+.|+ ++.+|-|+|-+|+++|..+-||..|++||+++|++++||.++|+++
T Consensus 252 ~dAYiNLGnV~ke~~~~d~Avs~Y~rAl~lrpn-~A~a~gNla~iYyeqG~ldlAI~~Ykral~~~P~F~~Ay~NlanAL 330 (966)
T KOG4626|consen 252 LDAYINLGNVYKEARIFDRAVSCYLRALNLRPN-HAVAHGNLACIYYEQGLLDLAIDTYKRALELQPNFPDAYNNLANAL 330 (966)
T ss_pred hHHHhhHHHHHHHHhcchHHHHHHHHHHhcCCc-chhhccceEEEEeccccHHHHHHHHHHHHhcCCCchHHHhHHHHHH
Confidence 677888888888888888888888888888888 8888888888888888888888888888888888888888888888
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
...|+..||+.+|++||.+.|++..+.
T Consensus 331 kd~G~V~ea~~cYnkaL~l~p~hadam 357 (966)
T KOG4626|consen 331 KDKGSVTEAVDCYNKALRLCPNHADAM 357 (966)
T ss_pred HhccchHHHHHHHHHHHHhCCccHHHH
Confidence 888888888888888888888876654
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-12 Score=115.24 Aligned_cols=115 Identities=16% Similarity=0.121 Sum_probs=101.2
Q ss_pred chhhHHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc--------CCCC---------ChHHHhhhHHHhhhcCCh
Q 010340 392 SFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV--------GTMV---------SPTVYARRSLCHLMCDQP 454 (512)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~--------~~~~---------~~~~~~~~~~~~~~~~~~ 454 (512)
+..+.-+.++....++++|+.+|++|+|.+|+..|+.||.. .|.+ ...++.|.+.|++..|+|
T Consensus 167 WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~ 246 (329)
T KOG0545|consen 167 WQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEY 246 (329)
T ss_pred ccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHH
Confidence 33344456777889999999999999999999999999832 2331 345799999999999999
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 455 DAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 455 ~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
-++++.+..+|+.+|.+.+|||++|.++....+..+|.++|.++|++||.-.
T Consensus 247 yevleh~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpsla 298 (329)
T KOG0545|consen 247 YEVLEHCSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLA 298 (329)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhH
Confidence 9999999999999999999999999999999999999999999999999743
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-12 Score=97.03 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=57.6
Q ss_pred ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcC-ChHHHHHHHHHHHhchh
Q 010340 437 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLD-MHKDAADMLKEAASLEE 503 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~l~p 503 (512)
++.+|+++|.+++..|+|++|+.+|+++++++|+++.+|+++|.++..+| ++++|+++|++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 57788888888888888888888888888888888888888888888888 68888888888888887
|
... |
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.7e-12 Score=122.57 Aligned_cols=106 Identities=19% Similarity=0.378 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC---ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV---SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 475 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 475 (512)
..+.-......|+.+|+.|+|..|.++|+.||.++|.. +..+|.|+|.++..+|+..+|+.+++.|++|+|.+.+++
T Consensus 245 ~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikal 324 (486)
T KOG0550|consen 245 MPKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKAL 324 (486)
T ss_pred hHHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHH
Confidence 44557788899999999999999999999999999983 356799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 476 YMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 476 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
.++|.|+..+++|++|+++|++|++++-.
T Consensus 325 l~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 325 LRRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999988765
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.3e-13 Score=141.43 Aligned_cols=240 Identities=17% Similarity=0.122 Sum_probs=171.5
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..+++.+-+|+++.++.+.-.. .+...++|+...... .+.+....+-.++-...+|.+++..-.+......+|+
T Consensus 806 ~~i~~p~qS~sp~ss~p~~pa~---sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 806 FEITKPSQSGSPSSSFPASPAG---SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ceecccccCCCCcccccCCccc---cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 3356677789999988776554 555566666543322 1223344444455555667777766666667778999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--- 225 (512)
++|+.+++|...|+ ..+..+.......+..+..+++|||... ++|+|++|.|+|+..+++.++.|||.......
T Consensus 883 ~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccch-hhcccccccchhhcccCCcccCccccccccccccC
Confidence 99999999999997 4445676667778888999999999987 99999999999999999999999984321100
Q ss_pred --------------------------------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhh
Q 010340 226 --------------------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHA 273 (512)
Q Consensus 226 --------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~ 273 (512)
.....+|+.|.+||...+......+|+|++|++++|.++|.+||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 011346889999999999999999999999999999999997754432
Q ss_pred HHHHhccchhhhccccc-CCCCCHHHHHHHHHHHHHhhccCCCCCCChH
Q 010340 274 LDMIRGKNILHLMDSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTK 321 (512)
Q Consensus 274 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 321 (512)
.+... ..+..... ...-+...+....+++...+..+|.+|..+.
T Consensus 1040 pq~~f----~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1040 PQQIF----ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhh----hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 22111 11111111 1122344566788999999999999997765
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.6e-12 Score=126.43 Aligned_cols=108 Identities=20% Similarity=0.240 Sum_probs=101.7
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+++...-+|..|+-.|+|+.|+++|+.||..+|+ +..+|+.+|..+..-.+.++||+.|.+|++|.|.+..++|++|+.
T Consensus 429 DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgIS 507 (579)
T KOG1125|consen 429 DPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGIS 507 (579)
T ss_pred ChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhhh
Confidence 4667778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
++.+|.|+||+.+|-.||.+.+++....+
T Consensus 508 ~mNlG~ykEA~~hlL~AL~mq~ks~~~~~ 536 (579)
T KOG1125|consen 508 CMNLGAYKEAVKHLLEALSMQRKSRNHNK 536 (579)
T ss_pred hhhhhhHHHHHHHHHHHHHhhhccccccc
Confidence 99999999999999999999998554443
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.4e-12 Score=116.68 Aligned_cols=107 Identities=21% Similarity=0.356 Sum_probs=99.7
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc---CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV---GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~---~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
.|..|++.|+.+|+.++|..|+.+|+++|+. ||..+..+|.|||.|.+.+|+|..||.++.+|++++|.+.++||+-
T Consensus 80 ~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R~ 159 (390)
T KOG0551|consen 80 QAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIRG 159 (390)
T ss_pred HHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhhh
Confidence 6889999999999999999999999999976 4554788999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
|.|++++.++++|+.+++..++++.+...+
T Consensus 160 Akc~~eLe~~~~a~nw~ee~~~~d~e~K~~ 189 (390)
T KOG0551|consen 160 AKCLLELERFAEAVNWCEEGLQIDDEAKKA 189 (390)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 999999999999999999999998876543
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.6e-11 Score=101.50 Aligned_cols=105 Identities=11% Similarity=0.111 Sum_probs=97.4
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc---HHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---STAFY 476 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~ 476 (512)
+..++..|..+++.|+|++|+..|++++...|. + ..+++.+|.++++.|++++|+..|++++..+|++ +.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALL 80 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHH
Confidence 467889999999999999999999999998876 4 5789999999999999999999999999999986 67899
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 477 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
.+|.++..+|++++|+..|+++++..|++..+
T Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 112 (119)
T TIGR02795 81 KLGMSLQELGDKEKAKATLQQVIKRYPGSSAA 112 (119)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHCcCChhH
Confidence 99999999999999999999999999987654
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.7e-12 Score=115.77 Aligned_cols=105 Identities=18% Similarity=0.182 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.+++...+.|+.++..|+|..|+..|..|++.+|+ ++.+++.+|.+|+.+|+-..|+.++.++|++.|++..|...+|.
T Consensus 36 advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQRg~ 114 (504)
T KOG0624|consen 36 ADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQRGV 114 (504)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHhch
Confidence 56778899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
+++++|++++|..+|++.|+.+|.+.
T Consensus 115 vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 115 VLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred hhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999654
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-11 Score=131.43 Aligned_cols=103 Identities=25% Similarity=0.374 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
...+..++.+|+.+++.|+|++|+..|+++|++.|. +..|.|+|.||+.+|++++|+++|++|++++|++.++|+++|
T Consensus 124 ~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a 201 (615)
T TIGR00990 124 KKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRA 201 (615)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 345788999999999999999999999999999886 678999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhh
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
.+|..+|+|++|+.+|.+++.+++.
T Consensus 202 ~a~~~lg~~~eA~~~~~~~~~~~~~ 226 (615)
T TIGR00990 202 NAYDGLGKYADALLDLTASCIIDGF 226 (615)
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999888776653
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.9e-12 Score=93.64 Aligned_cols=67 Identities=15% Similarity=0.286 Sum_probs=65.0
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcC-ChHHHHHHHHHHHhhCC
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-QPDAALRDAMQAQCVYP 469 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p 469 (512)
++..+..+|..++..|+|++|+..|+++|+++|. ++.+|+++|.||..+| ++++|+++++++++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 5788999999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-11 Score=104.45 Aligned_cols=131 Identities=21% Similarity=0.206 Sum_probs=100.4
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh--------hHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--------KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~--------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.+++|+-+.+|.+.+.. ..+++|.-.+.....+ ++..+|++++.++.--.|...+=+..+.....|+
T Consensus 3 ~i~~GAEa~i~~~~~~g-----~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~ 77 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-----LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIV 77 (204)
T ss_pred hhhCCcceeEEeeeccC-----cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEE
Confidence 45889999999997743 2366666444333221 3577899999999766666666666777778899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
|||++|..|.+.+... ...++..|-.-+.-||..+ |+|+||.++||++..++ +.++|||++...
T Consensus 78 me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 78 MEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999999999888532 2446677777778899999 99999999999998765 999999998754
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.6e-11 Score=106.62 Aligned_cols=97 Identities=9% Similarity=-0.007 Sum_probs=57.3
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+....++|..|++.|++..|.+.+++||+.||. ++.+|..+|..|.++|+.+.|-+.|++|+.++|++.+.++|.|..+
T Consensus 35 a~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~FL 113 (250)
T COG3063 35 AKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGAFL 113 (250)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhHHH
Confidence 344455555566666666666666666666655 5566666666666666666666666666666666666666666555
Q ss_pred HHcCChHHHHHHHHHHHh
Q 010340 483 AKLDMHKDAADMLKEAAS 500 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~ 500 (512)
+..|+|++|.+.|++|++
T Consensus 114 C~qg~~~eA~q~F~~Al~ 131 (250)
T COG3063 114 CAQGRPEEAMQQFERALA 131 (250)
T ss_pred HhCCChHHHHHHHHHHHh
Confidence 555555555555555553
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=8e-11 Score=104.32 Aligned_cols=108 Identities=19% Similarity=0.167 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC--ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 476 (512)
...++..++.+|..+...|++++|+.+|+++++..+.. ...+++++|.++..+|++++|+..+++++++.|++..++.
T Consensus 31 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 110 (172)
T PRK02603 31 KAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALN 110 (172)
T ss_pred HhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34568889999999999999999999999999886652 2578999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC--------------hHHHHHHHHHHHhchhhhh
Q 010340 477 MQAVALAKLDM--------------HKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 477 ~~g~~~~~~~~--------------~~~A~~~~~~al~l~p~~~ 506 (512)
.+|.++..+|+ +++|++.+++++.++|++-
T Consensus 111 ~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 111 NIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 99999999998 7889999999999999863
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.6e-11 Score=112.35 Aligned_cols=140 Identities=16% Similarity=0.128 Sum_probs=107.8
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCC--CCccceEEEEeeC---CeeEEEE
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRH--KRLANLIGYCCDG---DERLLVA 149 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~ 149 (512)
..+|.|.++.||++... +++.++||........ ....+.+|++++..+.+ .++.+++.+.... +..++||
T Consensus 4 ~~l~~G~~n~~~~v~~~----~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG----GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEec----CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 45689999999999875 3466999998754421 34578999999999965 4567888887664 2568999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-------------------------------------- 191 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 191 (512)
||++|.+|.+.+. ...++......++.+++++|..||+.
T Consensus 80 e~i~G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 80 ERVDGRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EEeCCEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 9999998877652 13567777777888888888888742
Q ss_pred -----------------CCccccccCccceeecC--CCCCeeecccCccc
Q 010340 192 -----------------GRPLYHDLNAYRVLFDE--NGDPRLSCFGLMKN 222 (512)
Q Consensus 192 -----------------~~iiH~Dlkp~Nill~~--~~~~kl~Dfg~a~~ 222 (512)
..++|+|++|.|||++. ++.+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 12599999999999998 56688999998754
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.4e-11 Score=129.95 Aligned_cols=106 Identities=17% Similarity=0.149 Sum_probs=70.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.+..+..+|..++..|++++|+..|+++++++|. ...+|+++|.++..+|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 330 ~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~ 408 (615)
T TIGR00990 330 EAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQL 408 (615)
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3455666666666666666666666666666666 666666666666666666666666666666666666666666666
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
++.+|++++|+.+|+++++++|++..+
T Consensus 409 ~~~~g~~~~A~~~~~kal~l~P~~~~~ 435 (615)
T TIGR00990 409 HFIKGEFAQAGKDYQKSIDLDPDFIFS 435 (615)
T ss_pred HHHcCCHHHHHHHHHHHHHcCccCHHH
Confidence 666666666666666666666665443
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.6e-11 Score=93.60 Aligned_cols=99 Identities=18% Similarity=0.292 Sum_probs=94.4
Q ss_pred HHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 010340 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 484 (512)
Q Consensus 405 ~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 484 (512)
.++.+|..++..|++++|+..++++++..|. +..+++.+|.++...+++++|+..+++++++.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 4678899999999999999999999999998 889999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHhchhh
Q 010340 485 LDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 485 ~~~~~~A~~~~~~al~l~p~ 504 (512)
.|++++|...|+++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999998874
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-11 Score=95.55 Aligned_cols=82 Identities=16% Similarity=0.267 Sum_probs=74.6
Q ss_pred hhcHHHHHHHHHHHHhcCCCC-ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHH
Q 010340 416 EKEFKTAVDCYSQFIDVGTMV-SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADM 494 (512)
Q Consensus 416 ~~~~~~Ai~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~ 494 (512)
+|+|++|+..|+++++.+|.+ +...++++|.||+++|+|++|+..+++ ++.+|.+...++.+|.+++++|+|++|+..
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~ 80 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIKA 80 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 689999999999999999852 467788899999999999999999999 999999999999999999999999999999
Q ss_pred HHHH
Q 010340 495 LKEA 498 (512)
Q Consensus 495 ~~~a 498 (512)
|++|
T Consensus 81 l~~~ 84 (84)
T PF12895_consen 81 LEKA 84 (84)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9986
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.8e-11 Score=101.24 Aligned_cols=142 Identities=18% Similarity=0.144 Sum_probs=106.7
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--------hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+..+-+|+-+.|+++.+ .|+.+.||.-......- ..+..+|+++|.++.--.|.-..=++.+...-.
T Consensus 12 l~likQGAEArv~~~~~-----~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~ 86 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF-----SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQ 86 (229)
T ss_pred ceeeeccceeeEeeecc-----CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCe
Confidence 45567899899999988 56667777644332221 246788999999997666666666677777778
Q ss_pred EEEEccCC-CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC---CCeeecccCccc
Q 010340 147 LVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLMKN 222 (512)
Q Consensus 147 lv~E~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg~a~~ 222 (512)
|+|||++| .++.+++...............++..|-+.+.-||.++ +||+||..+||++..++ .+.++|||++..
T Consensus 87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99999987 57888887543333333444778899999999999999 99999999999996443 358999999754
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.6e-11 Score=107.92 Aligned_cols=100 Identities=26% Similarity=0.408 Sum_probs=96.0
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+.++|+.+|..++|..||.+|.+||.+.|. .+.+|.|++.||+++++++.+..++.+|++++|+.++++|.+|.++
T Consensus 10 a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~~ 88 (284)
T KOG4642|consen 10 AEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQWL 88 (284)
T ss_pred HHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHHH
Confidence 678899999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchh
Q 010340 483 AKLDMHKDAADMLKEAASLEE 503 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p 503 (512)
.+...|++|+..+.+|..+--
T Consensus 89 l~s~~~~eaI~~Lqra~sl~r 109 (284)
T KOG4642|consen 89 LQSKGYDEAIKVLQRAYSLLR 109 (284)
T ss_pred HhhccccHHHHHHHHHHHHHh
Confidence 999999999999999976643
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.7e-12 Score=123.42 Aligned_cols=109 Identities=27% Similarity=0.369 Sum_probs=104.1
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.+..+..+|+.+++.++|+.|+..|.+||+++|+ .+.++.+|+.++++.++|..|+.++.+||+++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcCCC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSGRG 511 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~~ 511 (512)
++.++++.+|+.+|+++..+.|++..+.++
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~ 111 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDATRK 111 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHHHH
Confidence 999999999999999999999998877654
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.9e-12 Score=125.41 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=64.3
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
.+|-..|..+....+|+.|..+|+.||..+|. ++.+||.+|.+|+++++++.|.-+|++|++++|.+.......|.++.
T Consensus 456 YayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~~ 534 (638)
T KOG1126|consen 456 YAYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQH 534 (638)
T ss_pred hhhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHHHH
Confidence 33444455555555555555555555555555 55666666666666666666666666666666666666666666666
Q ss_pred HcCChHHHHHHHHHHHhchhhhh
Q 010340 484 KLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 484 ~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
++|+.++|+..|++|+.+||+|.
T Consensus 535 ~~k~~d~AL~~~~~A~~ld~kn~ 557 (638)
T KOG1126|consen 535 QLKRKDKALQLYEKAIHLDPKNP 557 (638)
T ss_pred HhhhhhHHHHHHHHHHhcCCCCc
Confidence 66666666666666666666654
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-10 Score=91.09 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc----HHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----STA 474 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----~~~ 474 (512)
.++....+-.+|.++...|+.++|++.|.++|.+.|. .+.+|+|++.+|..+|+.++|+.++++|+++.-+. -++
T Consensus 39 ~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa 117 (175)
T KOG4555|consen 39 AIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQA 117 (175)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHH
Confidence 4556777888999999999999999999999999999 99999999999999999999999999999998665 368
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 475 FYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 475 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
|..+|.+|..+|+-+.|..+|+.|.+|..+.
T Consensus 118 ~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~F 148 (175)
T KOG4555|consen 118 FVQRGLLYRLLGNDDAARADFEAAAQLGSKF 148 (175)
T ss_pred HHHHHHHHHHhCchHHHHHhHHHHHHhCCHH
Confidence 9999999999999999999999999887653
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.4e-10 Score=113.55 Aligned_cols=216 Identities=18% Similarity=0.157 Sum_probs=157.2
Q ss_pred CCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee----CCeeEEEEEccCC-CCH
Q 010340 83 PNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLLVAEYMPN-DTL 157 (512)
Q Consensus 83 ~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~~~~-g~L 157 (512)
-.+.|++.... +|..|++|+++............-+++++++.|+|||++.+++.. +..+++|++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~---DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNV---DGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeecc---CCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 45678888776 888899999965544444445567889999999999999998873 4568999999987 578
Q ss_pred Hhhhhhc-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 158 AKHLFHW-------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 158 ~~~l~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++-... .+...++..+|.++.|+..||.++|+.| +..+-|.+.+||++.+.+++|+..|+.....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeec
Confidence 7765432 2335788999999999999999999999 8889999999999999999999888876544
Q ss_pred CCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 225 DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 225 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
... . |-+.+ -.+-|.=.||.+++.|.||..-.. ......+. ....+....+.++.+
T Consensus 445 ~d~--------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~-------~~d~~~~s----~~~~I~~~yS~D~rn 500 (655)
T KOG3741|consen 445 EDP--------T--EPLES---QQQNDLRDLGLLLLALATGTENSN-------RTDSTQSS----HLTRITTTYSTDLRN 500 (655)
T ss_pred CCC--------C--cchhH---HhhhhHHHHHHHHHHHhhcccccc-------cccchHHH----HHHHhhhhhhHHHHH
Confidence 332 0 11111 124567789999999999963210 00001110 011234556677888
Q ss_pred HHHHhhccCCCCCCChHHHHHHh
Q 010340 305 LASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L 327 (512)
++.-....++++ -++.+++.++
T Consensus 501 ~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 501 VVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHHHHhcCccc-ccHHHHHHHH
Confidence 999988888887 6788887765
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.21 E-value=2e-10 Score=101.32 Aligned_cols=105 Identities=20% Similarity=0.154 Sum_probs=92.4
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC--ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
..+..++..|..+...|+|++|+..|++|+.+.+.. ...+|+++|.+|..+|++++|+..++++++++|.+..++.++
T Consensus 33 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~l 112 (168)
T CHL00033 33 KEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNNM 112 (168)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHH
Confidence 458889999999999999999999999999886541 345899999999999999999999999999999999999999
Q ss_pred HHHHH-------HcCChH-------HHHHHHHHHHhchhhh
Q 010340 479 AVALA-------KLDMHK-------DAADMLKEAASLEEKR 505 (512)
Q Consensus 479 g~~~~-------~~~~~~-------~A~~~~~~al~l~p~~ 505 (512)
|.++. .+|+++ +|+..|++++.++|.+
T Consensus 113 a~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 113 AVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999 777766 6666777788888854
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-10 Score=128.02 Aligned_cols=106 Identities=9% Similarity=-0.033 Sum_probs=100.3
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+...|.++.+.|++++|+..|+++++++|. +..+++++|.++..+|++++|+..|++|++++|+++.+++++|.+
T Consensus 608 ~~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~a 686 (987)
T PRK09782 608 SANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYV 686 (987)
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3667888999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+..+|++++|+.+|+++++++|++...
T Consensus 687 l~~lGd~~eA~~~l~~Al~l~P~~a~i 713 (987)
T PRK09782 687 NQRLDDMAATQHYARLVIDDIDNQALI 713 (987)
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCchh
Confidence 999999999999999999999987543
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.2e-11 Score=120.73 Aligned_cols=101 Identities=16% Similarity=0.129 Sum_probs=53.5
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
.+|+-.|.+|+++++|+.|.-.|++|++++|. +.....-+|..+.++|+.++|+..+++|+.++|.++-..|.+|.+++
T Consensus 490 nAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~-nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~l~~~~~~~il~ 568 (638)
T KOG1126|consen 490 NAWYGLGTVYLKQEKLEFAEFHFQKAVEINPS-NSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNPLCKYHRASILF 568 (638)
T ss_pred HHHHhhhhheeccchhhHHHHHHHhhhcCCcc-chhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCchhHHHHHHHHH
Confidence 34444555555555555555555555555555 55555555555555555555555555555555555555555555555
Q ss_pred HcCChHHHHHHHHHHHhchhhh
Q 010340 484 KLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 484 ~~~~~~~A~~~~~~al~l~p~~ 505 (512)
.+++|++|+..+++..++-|++
T Consensus 569 ~~~~~~eal~~LEeLk~~vP~e 590 (638)
T KOG1126|consen 569 SLGRYVEALQELEELKELVPQE 590 (638)
T ss_pred hhcchHHHHHHHHHHHHhCcch
Confidence 5555555555555555555543
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.18 E-value=2e-10 Score=111.04 Aligned_cols=112 Identities=7% Similarity=-0.020 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHhHHHhhh-cHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCCh--HHHHHHHHHHHhhCCCcHHHH
Q 010340 399 QMRDMLEARKRGDVAFREK-EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQP--DAALRDAMQAQCVYPDWSTAF 475 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~--~~A~~~~~~al~~~p~~~~~~ 475 (512)
...+...+..+|.++.+.| ++++|+..++++++.+|+ +..+|+.++.++.++|+. +++++.++++++++|++..+|
T Consensus 67 nP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW 145 (320)
T PLN02789 67 NPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAW 145 (320)
T ss_pred CchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHH
Confidence 4466788999999999998 689999999999999999 999999999999999874 789999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcCCC
Q 010340 476 YMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRG 511 (512)
Q Consensus 476 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~~ 511 (512)
..+|.++..+|+|++|++++.++|++||.|..||..
T Consensus 146 ~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~~ 181 (320)
T PLN02789 146 SHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAWNQ 181 (320)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHHHH
Confidence 999999999999999999999999999999998853
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.17 E-value=8.1e-11 Score=85.86 Aligned_cols=64 Identities=19% Similarity=0.115 Sum_probs=47.4
Q ss_pred hhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 442 ARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 442 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+.+|..++..|+|++|+..|+++++.+|+++.+++.+|.++..+|++++|+..|+++++++|+|
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 3567777777777777777777777777777777777777777777777777777777777765
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=120.84 Aligned_cols=100 Identities=14% Similarity=-0.004 Sum_probs=63.3
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+..+|.++...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..++++++++|.++.+++.++.+
T Consensus 337 ~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~ 415 (553)
T PRK12370 337 NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWI 415 (553)
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 3555556666666666666666666666666666 666666666666666666666666666666666666555555555
Q ss_pred HHHcCChHHHHHHHHHHHhch
Q 010340 482 LAKLDMHKDAADMLKEAASLE 502 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~ 502 (512)
++.+|++++|+..++++++.+
T Consensus 416 ~~~~g~~eeA~~~~~~~l~~~ 436 (553)
T PRK12370 416 TYYHTGIDDAIRLGDELRSQH 436 (553)
T ss_pred HHhccCHHHHHHHHHHHHHhc
Confidence 666666666666666666553
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-10 Score=122.07 Aligned_cols=110 Identities=5% Similarity=-0.119 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
.+++++.++.+|.+....|++++|+..++.+++++|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++.+
T Consensus 82 ~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~~ 160 (694)
T PRK15179 82 YPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILLE 160 (694)
T ss_pred ccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 3445666667777777777777777777777777776 777777777777777777777777777777777777777777
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
|.++.++|+|++|+..|++++..+|++..+|
T Consensus 161 a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~~ 191 (694)
T PRK15179 161 AKSWDEIGQSEQADACFERLSRQHPEFENGY 191 (694)
T ss_pred HHHHHHhcchHHHHHHHHHHHhcCCCcHHHH
Confidence 7777777777777777777776666555443
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.7e-11 Score=114.13 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=100.6
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+.++...|..+|-.|++-.|-..|+++|+++|. +...|..||..|....+-++-+.+|.+|..++|++++.||.+|.++
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 888999999999999999999999999999999 7777999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+-+++|++|+.+|++|+.|+|+|.-+.
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~~~~~ 431 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPENAYAY 431 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhhhHHH
Confidence 999999999999999999999987553
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.4e-10 Score=95.63 Aligned_cols=103 Identities=7% Similarity=-0.061 Sum_probs=97.4
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
+..+.++..|..+|.+|+|++|...|+-....++. +++.++.+|.|+..+|+|++|+..|..|..++++++...|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 35778899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhh
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
||..+|+.+.|+..|+.+++. |++
T Consensus 114 C~l~l~~~~~A~~~f~~a~~~-~~~ 137 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNER-TED 137 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHhC-cch
Confidence 999999999999999999983 443
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.7e-10 Score=97.45 Aligned_cols=85 Identities=15% Similarity=0.098 Sum_probs=80.7
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.+...+..+|.++.+.|+|++|+..|+++++++|. ++.+++++|.|+..+|++++|+..|+++++++|+++..+.++|.
T Consensus 56 ~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~~~~ 134 (144)
T PRK15359 56 WSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQN 134 (144)
T ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 45788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 010340 481 ALAKLD 486 (512)
Q Consensus 481 ~~~~~~ 486 (512)
+...++
T Consensus 135 ~~~~l~ 140 (144)
T PRK15359 135 AQIMVD 140 (144)
T ss_pred HHHHHH
Confidence 887654
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.7e-10 Score=104.66 Aligned_cols=132 Identities=9% Similarity=0.056 Sum_probs=98.6
Q ss_pred eEEEEEEcCCCCCceEEEEEecCccCCCC-----------hhHHHHHHHHHhcCCCCC--ccceEEEEee-----CCeeE
Q 010340 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----------PKQFADEAWGVGKLRHKR--LANLIGYCCD-----GDERL 146 (512)
Q Consensus 85 ~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~n--iv~l~~~~~~-----~~~~~ 146 (512)
.|+++.. .|+.|.||......+.. ...+.+|...+.+|..-+ ++.++++++. ...-+
T Consensus 37 rvvr~~~-----~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~ 111 (268)
T PRK15123 37 RTLRFEL-----AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSF 111 (268)
T ss_pred eEEEEEE-----CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeE
Confidence 4667655 56779999775433211 114789999999885433 4455666653 23468
Q ss_pred EEEEccCCC-CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-------CCCCeeeccc
Q 010340 147 LVAEYMPND-TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-------NGDPRLSCFG 218 (512)
Q Consensus 147 lv~E~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-------~~~~kl~Dfg 218 (512)
||||++++. +|.+++........+...+..++.+|+..+.-||..| |+|+|+++.|||++. ++.+.|+||+
T Consensus 112 LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~ 190 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLH 190 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence 999999886 8999986433455667778889999999999999999 999999999999975 4678999999
Q ss_pred Cccc
Q 010340 219 LMKN 222 (512)
Q Consensus 219 ~a~~ 222 (512)
.+..
T Consensus 191 r~~~ 194 (268)
T PRK15123 191 RAQI 194 (268)
T ss_pred cccc
Confidence 8753
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.9e-10 Score=102.62 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=88.5
Q ss_pred hhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH-HHcCC--hHHH
Q 010340 415 REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL-AKLDM--HKDA 491 (512)
Q Consensus 415 ~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~-~~~~~--~~~A 491 (512)
..++.++++..++++++.+|+ +.++|+++|.+|..+|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 468889999999999999999 9999999999999999999999999999999999999999999985 67788 5999
Q ss_pred HHHHHHHHhchhhhhhcC
Q 010340 492 ADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 492 ~~~~~~al~l~p~~~~~~ 509 (512)
++.|+++++++|++..++
T Consensus 130 ~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 130 REMIDKALALDANEVTAL 147 (198)
T ss_pred HHHHHHHHHhCCCChhHH
Confidence 999999999999998765
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-10 Score=106.84 Aligned_cols=107 Identities=11% Similarity=0.141 Sum_probs=98.5
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh---HHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHH---HH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP---TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWST---AF 475 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~ 475 (512)
.+..++.+|..+++.|+|++|+..|+++++..|. ++ .+++.+|.+|..+|++++|+..++++++.+|+++. ++
T Consensus 32 ~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 110 (235)
T TIGR03302 32 PAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYAY 110 (235)
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHHH
Confidence 4678899999999999999999999999999887 54 68899999999999999999999999999998876 79
Q ss_pred HHHHHHHHHc--------CChHHHHHHHHHHHhchhhhhhcC
Q 010340 476 YMQAVALAKL--------DMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 476 ~~~g~~~~~~--------~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+.+|.++..+ |++++|+..|+++++.+|++..++
T Consensus 111 ~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 152 (235)
T TIGR03302 111 YLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYAP 152 (235)
T ss_pred HHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhHH
Confidence 9999999987 899999999999999999986543
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.5e-10 Score=119.08 Aligned_cols=108 Identities=14% Similarity=0.036 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhC-CCcHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY-PDWSTAFYMQA 479 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~g 479 (512)
+++..++.+|..++..|++++|+..|+++++++|. +..+++.++.+++..|++++|+..++++++.. |+++.+++.+|
T Consensus 370 ~~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~-~~~~~~~~~~~~~~~g~~eeA~~~~~~~l~~~~p~~~~~~~~la 448 (553)
T PRK12370 370 ISADIKYYYGWNLFMAGQLEEALQTINECLKLDPT-RAAAGITKLWITYYHTGIDDAIRLGDELRSQHLQDNPILLSMQV 448 (553)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-ChhhHHHHHHHHHhccCHHHHHHHHHHHHHhccccCHHHHHHHH
Confidence 44778888999999999999999999999999998 77777777777888899999999999998875 78899999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.++..+|++++|+..+++.+..+|.+..++
T Consensus 449 ~~l~~~G~~~eA~~~~~~~~~~~~~~~~~~ 478 (553)
T PRK12370 449 MFLSLKGKHELARKLTKEISTQEITGLIAV 478 (553)
T ss_pred HHHHhCCCHHHHHHHHHHhhhccchhHHHH
Confidence 999999999999999999888887755443
|
|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1e-09 Score=102.91 Aligned_cols=104 Identities=11% Similarity=0.031 Sum_probs=94.3
Q ss_pred HHHHHHHhHH-HhhhcHHHHHHHHHHHHhcCCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc---HHHHH
Q 010340 404 LEARKRGDVA-FREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---STAFY 476 (512)
Q Consensus 404 ~~~~~~g~~~-~~~~~~~~Ai~~~~~al~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~ 476 (512)
...+..|..+ ++.|+|++|+..|++.++..|+ + +.+++.+|.+|+..|+|++|+..|+++++.+|++ +++++
T Consensus 143 ~~~Y~~A~~l~~~~~~y~~Ai~af~~fl~~yP~-s~~a~~A~y~LG~~y~~~g~~~~A~~~f~~vv~~yP~s~~~~dAl~ 221 (263)
T PRK10803 143 NTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPD-STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMF 221 (263)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhHHHH
Confidence 4556777776 6779999999999999999998 5 5899999999999999999999999999999884 89999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 477 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
.+|.++..+|++++|+..|+++++..|+...+
T Consensus 222 klg~~~~~~g~~~~A~~~~~~vi~~yP~s~~a 253 (263)
T PRK10803 222 KVGVIMQDKGDTAKAKAVYQQVIKKYPGTDGA 253 (263)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCCHHH
Confidence 99999999999999999999999999987654
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.9e-10 Score=82.19 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=60.6
Q ss_pred HHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH
Q 010340 407 RKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472 (512)
Q Consensus 407 ~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 472 (512)
+.+|..+++.|+|++|+..|+++++.+|. +..+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 36799999999999999999999999999 999999999999999999999999999999999985
|
|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.7e-10 Score=100.86 Aligned_cols=107 Identities=17% Similarity=0.062 Sum_probs=99.9
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.+...+..+|..++..|+|.+|+..++++..++|+ +..+|..+|.+|.++|++++|-..|.+++++.|+++.+..|+|.
T Consensus 98 ~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlgm 176 (257)
T COG5010 98 KDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLGM 176 (257)
T ss_pred ccHHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHHH
Confidence 44556777999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
.|+-.|+++.|...+..+....+.+.+.
T Consensus 177 s~~L~gd~~~A~~lll~a~l~~~ad~~v 204 (257)
T COG5010 177 SLLLRGDLEDAETLLLPAYLSPAADSRV 204 (257)
T ss_pred HHHHcCCHHHHHHHHHHHHhCCCCchHH
Confidence 9999999999999999998887765543
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.9e-10 Score=97.05 Aligned_cols=119 Identities=14% Similarity=0.109 Sum_probs=104.1
Q ss_pred cccchhhHHH-HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhh
Q 010340 389 NELSFQEWTQ-QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 467 (512)
Q Consensus 389 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 467 (512)
+....+..+. ......++.-+|..|.+.|+.+.|-+.|++|+.++|+ +.++++|.|.-+..+|+|++|...|++|+..
T Consensus 54 A~~nlekAL~~DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~ 132 (250)
T COG3063 54 AKKNLEKALEHDPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALAD 132 (250)
T ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhC
Confidence 4444444444 2344778888999999999999999999999999999 9999999999999999999999999999863
Q ss_pred --CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 468 --YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 468 --~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+|.-++.|-|+|.|-+++|+++.|.++|+++|++||++..+
T Consensus 133 P~Y~~~s~t~eN~G~Cal~~gq~~~A~~~l~raL~~dp~~~~~ 175 (250)
T COG3063 133 PAYGEPSDTLENLGLCALKAGQFDQAEEYLKRALELDPQFPPA 175 (250)
T ss_pred CCCCCcchhhhhhHHHHhhcCCchhHHHHHHHHHHhCcCCChH
Confidence 34558899999999999999999999999999999987654
|
|
| >KOG1155 consensus Anaphase-promoting complex (APC), Cdc23 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.07 E-value=8.8e-10 Score=105.90 Aligned_cols=104 Identities=15% Similarity=0.090 Sum_probs=96.5
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
..++-..|..+...++-..||+.|++|++++|. +..+|+.+|.+|.-++...=|+-+|++|+++.|++...|..+|.||
T Consensus 364 ~~aWTLmGHEyvEmKNt~AAi~sYRrAvdi~p~-DyRAWYGLGQaYeim~Mh~YaLyYfqkA~~~kPnDsRlw~aLG~CY 442 (559)
T KOG1155|consen 364 LSAWTLMGHEYVEMKNTHAAIESYRRAVDINPR-DYRAWYGLGQAYEIMKMHFYALYYFQKALELKPNDSRLWVALGECY 442 (559)
T ss_pred hHHHHHhhHHHHHhcccHHHHHHHHHHHhcCch-hHHHHhhhhHHHHHhcchHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 556667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhh
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
.++++.++|+.+|++|+.....+..
T Consensus 443 ~kl~~~~eAiKCykrai~~~dte~~ 467 (559)
T KOG1155|consen 443 EKLNRLEEAIKCYKRAILLGDTEGS 467 (559)
T ss_pred HHhccHHHHHHHHHHHHhccccchH
Confidence 9999999999999999998876543
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.9e-10 Score=97.52 Aligned_cols=125 Identities=18% Similarity=0.168 Sum_probs=82.3
Q ss_pred EEEEEEcCCCCCceEEEEEecCccCCC----------------------C----hhHHHHHHHHHhcCCCC--CccceEE
Q 010340 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP----------------------D----PKQFADEAWGVGKLRHK--RLANLIG 137 (512)
Q Consensus 86 Vy~~~~~~~~~~~~~vavK~~~~~~~~----------------------~----~~~~~~E~~~l~~l~h~--niv~l~~ 137 (512)
||.|... ++..+|||+.+..... . .....+|.+.|.++..- ++.++++
T Consensus 2 Vy~~~~~----~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~ 77 (188)
T PF01163_consen 2 VYHAIDP----DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYD 77 (188)
T ss_dssp EEEEEEC----TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEE
T ss_pred EEEEECC----CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEE
Confidence 8888886 5678999998753211 0 02478899999999655 5777775
Q ss_pred EEeeCCeeEEEEEccC--CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHH-HhcCCCccccccCccceeecCCCCCee
Q 010340 138 YCCDGDERLLVAEYMP--NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY-CSSEGRPLYHDLNAYRVLFDENGDPRL 214 (512)
Q Consensus 138 ~~~~~~~~~lv~E~~~--~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~iiH~Dlkp~Nill~~~~~~kl 214 (512)
+. .-+|||||++ |..+..+.. ..++......++.+++..+.. +|..| ++|+||.+.|||++.+ .+.|
T Consensus 78 ~~----~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~g-ivHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 78 YN----RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKAG-IVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp EE----TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCTT-EEESS-STTSEEEETT-CEEE
T ss_pred Ee----CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhcC-ceecCCChhhEEeecc-eEEE
Confidence 53 3479999998 655544332 112234456677788886655 57888 9999999999999987 9999
Q ss_pred ecccCccccC
Q 010340 215 SCFGLMKNSR 224 (512)
Q Consensus 215 ~Dfg~a~~~~ 224 (512)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999886554
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 512 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-27 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 2e-26 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 5e-25 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-24 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-23 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-23 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 3e-23 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-21 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-11 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-11 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 3e-11 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 3e-11 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 3e-11 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 3e-11 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-11 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-10 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-10 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-10 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 3e-10 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 3e-10 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 3e-10 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 4e-10 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 4e-10 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 4e-10 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 4e-10 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 5e-10 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 6e-10 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 7e-10 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 8e-10 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 8e-10 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 8e-10 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 8e-10 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 8e-10 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 8e-10 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 9e-10 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 9e-10 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 9e-10 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 9e-10 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 9e-10 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 9e-10 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 9e-10 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 1e-09 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-09 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 1e-09 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 1e-09 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 1e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 1e-09 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 1e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-09 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 1e-09 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 1e-09 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-09 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 1e-09 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-09 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 1e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-09 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 1e-09 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 1e-09 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-09 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-09 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-09 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-09 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-09 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 2e-09 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-09 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-09 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 2e-09 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-09 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-09 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-09 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-09 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-09 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-09 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-09 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-09 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 2e-09 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 2e-09 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 3e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 3e-09 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 3e-09 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 3e-09 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 3e-09 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 4e-09 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 4e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 4e-09 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 4e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 5e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 6e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 8e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-08 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-08 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-08 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-08 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-08 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 1e-08 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-08 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 1e-08 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 2e-08 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 2e-08 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 2e-08 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-08 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 2e-08 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-08 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-08 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-08 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-08 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-08 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-08 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-08 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 4e-08 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 5e-08 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 5e-08 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 5e-08 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 5e-08 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 6e-08 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-08 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 6e-08 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 6e-08 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 6e-08 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 7e-08 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 7e-08 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 7e-08 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 7e-08 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 7e-08 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 7e-08 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 7e-08 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 7e-08 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 8e-08 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 8e-08 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 8e-08 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 8e-08 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 8e-08 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 8e-08 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 9e-08 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 9e-08 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 1e-07 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-07 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 1e-07 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 1e-07 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 1e-07 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 1e-07 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 1e-07 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-07 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-07 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 2e-07 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-07 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 2e-07 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-07 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 2e-07 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 3e-07 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-07 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 3e-07 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 3e-07 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 3e-07 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-07 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 3e-07 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 3e-07 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 4e-07 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 4e-07 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-07 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 4e-07 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 4e-07 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 4e-07 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 5e-07 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 5e-07 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 5e-07 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 6e-07 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-07 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-07 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 6e-07 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 6e-07 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 6e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 6e-07 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 7e-07 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 7e-07 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 8e-07 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 8e-07 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 8e-07 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 8e-07 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 8e-07 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 8e-07 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 9e-07 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 9e-07 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 9e-07 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 9e-07 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 9e-07 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-07 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 9e-07 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 1e-06 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 1e-06 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-06 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-06 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 1e-06 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 1e-06 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-06 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-06 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 1e-06 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-06 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-06 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 1e-06 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 1e-06 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-06 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-06 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-06 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-06 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-06 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 3e-06 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-06 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-06 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-06 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-06 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 4e-06 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 4e-06 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-06 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-06 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-06 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-06 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-06 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 5e-06 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 5e-06 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 5e-06 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 5e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 5e-06 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-06 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 5e-06 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 6e-06 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 6e-06 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 6e-06 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 6e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 6e-06 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 6e-06 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 6e-06 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 6e-06 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 6e-06 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 6e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 6e-06 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 6e-06 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 6e-06 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 7e-06 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 7e-06 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 8e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 8e-06 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 9e-06 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 9e-06 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 1e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-05 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 1e-05 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 1e-05 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 1e-05 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 1e-05 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 1e-05 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 1e-05 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-05 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-05 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 2e-05 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 2e-05 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 2e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-05 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 3e-05 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-05 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 3e-05 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 4e-05 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 4e-05 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 4e-05 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-05 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 4e-05 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 4e-05 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 4e-05 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-05 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 4e-05 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 5e-05 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-05 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-05 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-05 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 5e-05 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 5e-05 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 5e-05 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 5e-05 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 5e-05 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 5e-05 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 5e-05 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 5e-05 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 8e-05 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 8e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-04 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-04 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 1e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 1e-04 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-04 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 1e-04 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 1e-04 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 2e-04 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-04 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-04 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 2e-04 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 2e-04 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 2e-04 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 2e-04 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 3e-04 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 3e-04 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 3e-04 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 3e-04 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 3e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-04 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-04 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 3e-04 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 4e-04 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 5e-04 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 6e-04 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 6e-04 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 6e-04 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 7e-04 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 7e-04 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 7e-04 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 7e-04 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 7e-04 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 7e-04 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 7e-04 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 8e-04 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 8e-04 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 9e-04 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 211 bits (539), Expect = 1e-64
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 44/305 (14%)
Query: 57 FSLADLRAATNNFSSDFIVSES---GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
FS +L+ TNNF I GE VVYKG + + +AVKK
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTT----VAVKKLAAMVDIT 69
Query: 114 PKQ----FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-T 168
++ F E + K +H+ L L+G+ DGD+ LV YMPN +L L +
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 169 IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR------VLFDENGDPRLSCFGLMK- 221
+ W MR ++A A +++ L+ + + +R +L DE ++S FGL +
Sbjct: 130 LSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 222 NSRDGKSY-STNLA----YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK-----HIPPS 271
+ + ++ ++ + Y PE LR G +TP+S I+SFG VLL++++G H P
Sbjct: 183 SEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 272 HALDMIR-----GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326
LD+ K I +D + + S ++ +AS+CL + +RP+ K +
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 327 LAPLQ 331
L +
Sbjct: 301 LQEMT 305
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 3e-63
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 30/294 (10%)
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPK 115
FSL +L+ A++NFS+ I+ G VYKGRL DG +AVK+ +
Sbjct: 20 FSLRELQVASDNFSNKNILGRGGF---GKVYKGRLADG----TLVAVKRLKEERTQGGEL 72
Query: 116 QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF--HWENQTIEWAM 173
QF E + H+ L L G+C ERLLV YM N ++A L ++W
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 174 RLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY-S 230
R R+AL A L Y P ++ D+ A +L DE + + FGL K ++ +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 192
Query: 231 TNLA----YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK-----HIPP--------SHA 273
T + + PEYL G+ + ++ +F +G +LL+L++G+
Sbjct: 193 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 274 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
+++ K + L+D L+GN+ EE + +A C Q P ERP ++V L
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 1e-61
Identities = 85/313 (27%), Positives = 142/313 (45%), Gaps = 28/313 (8%)
Query: 35 SNGTEGSGGLAAGSDGAPAFA-EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQD 93
S T + S P + L DL ATNNF F++ VYKG L+D
Sbjct: 6 SKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVF---GKVYKGVLRD 62
Query: 94 GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153
G +A+K+ T + ++F E + RH L +LIG+C + +E +L+ +YM
Sbjct: 63 GAK----VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 154 NDTLAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211
N L +HL+ + T+ W RL + + A L Y ++ D+ + +L DEN
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL-HTRAIIHRDVKSINILLDENFV 177
Query: 212 PRLSCFGLMK-NSRDGKSY-STNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSG 265
P+++ FG+ K + +++ ST + T PEY GR+T +S ++SFG VL ++L
Sbjct: 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 266 K----HIPPSH-------ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEP 314
+ P A++ + ++D +L E D A +CL
Sbjct: 238 RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSS 297
Query: 315 RERPNTKDLVSTL 327
+RP+ D++ L
Sbjct: 298 EDRPSMGDVLWKL 310
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 9e-28
Identities = 51/265 (19%), Positives = 98/265 (36%), Gaps = 34/265 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
++KGR Q GND I VK W + F +E + H + ++G C
Sbjct: 25 ELWKGRWQ-GND----IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP 79
Query: 143 DERLL--VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DL 199
+ +MP +L L N ++ + ++ AL +A + + + + L
Sbjct: 80 PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHAL 139
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESV---IFSFG 256
N+ V+ DE+ R+S + K S A+ PE L+ ++SF
Sbjct: 140 NSRSVMIDEDMTARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA 198
Query: 257 TVLLDLLSGK----HIPPSHALDMIRGKN----ILHLMDSHLEGNFSSEEATVVFDLASR 308
+L +L++ + + + + I + H+ L
Sbjct: 199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVS------------KLMKI 246
Query: 309 CLQYEPRERPNTKDLVSTLAPLQNR 333
C+ +P +RP +V L +Q++
Sbjct: 247 CMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 1e-27
Identities = 49/322 (15%), Positives = 97/322 (30%), Gaps = 53/322 (16%)
Query: 56 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK 115
+ +L + + + V+K +L + +AVK F
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFG---CVWKAQLLNEY-----VAVKIFPIQDK-QSW 63
Query: 116 QFADEAWGVGKLRHKRLANLIGYCCDGD----ERLLVAEYMPNDTLAKHLFHWENQTIEW 171
Q E + + ++H+ + IG G + L+ + +L+ L + W
Sbjct: 64 QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSW 120
Query: 172 AMRLRVALYIAEALDY-------CSSEGRPLY-H-DLNAYRVLFDENGDPRLSCFGLMKN 222
+A +A L Y +P H D+ + VL N ++ FGL
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 223 SRDGKSYSTNLA------YTPPEYLRNGRVTPESV-----IFSFGTVLLDLLSGK----- 266
GKS Y PE L +++ G VL +L S
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
Query: 267 -----------HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASRCLQYEP 314
I +L+ ++ + L + + + C ++
Sbjct: 241 PVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDA 300
Query: 315 RERPNTKDLVSTLAPLQNRPDV 336
R + + + +Q ++
Sbjct: 301 EARLSAGCVGERITQMQRLTNI 322
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 33/264 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCCDG 142
V++ G+D +AVK + + +F E + +LRH + +G
Sbjct: 52 TVHRAEWH-GSD----VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106
Query: 143 DERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
+V EY+ +L + L + ++ RL +A +A+ ++Y + P+ H +L
Sbjct: 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLK 166
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFG 256
+ +L D+ ++ FGL + S + A TP PE LR+ +S ++SFG
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 257 TVLLDLLSGK----HIPPSHALDMIRGKN----ILHLMDSHLEGNFSSEEATVVFDLASR 308
+L +L + + ++ P+ + + K I ++ + +
Sbjct: 227 VILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA------------AIIEG 274
Query: 309 CLQYEPRERPNTKDLVSTLAPLQN 332
C EP +RP+ ++ L PL
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPLIK 298
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-24
Identities = 60/297 (20%), Positives = 100/297 (33%), Gaps = 42/297 (14%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
K + + +K+ + + F E + L H + IG
Sbjct: 26 AIKVTH---RETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL 82
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
+ EY+ TL + + W+ R+ A IA + Y S + H DLN++
Sbjct: 83 NFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHS--MNIIHRDLNSHNC 139
Query: 205 LFDENGDPRLSCFGL----------------MKNSRDGKSYST--NLAYTPPEYLRNGRV 246
L EN + ++ FGL +K K Y+ N + PE +
Sbjct: 140 LVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY 199
Query: 247 TPESVIFSFGTVLLDLLSGKHIPPSH-ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305
+ +FSFG VL +++ + P + M G N+ +D + N F +
Sbjct: 200 DEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPS----FFPI 255
Query: 306 ASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMG 362
RC +P +RP+ L L L+ P PQ G
Sbjct: 256 TVRCCDLDPEKRPSFVKLEHWLETLRMHLA------------GHLPLGPQLEQLDRG 300
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 2e-23
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 38/266 (14%)
Query: 86 VYKGRLQDGNDNRRW---IAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCC 140
VYKG+ W +AVK A + F +E + K RH + +G
Sbjct: 40 VYKGK---------WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 89
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DL 199
+ +V ++ +L HL H E + +A A +DY + + H DL
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYL--HAKSIIHRDL 146
Query: 200 NAYRVLFDENGDPRLSCFGL--MKNSRDGKSYSTN----LAYTPPEYLRNGRVTPESV-- 251
+ + E+ ++ FGL K+ G + + PE +R P S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 252 -IFSFGTVLLDLLSGK-----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305
+++FG VL +L++G+ ++M+ G+ L S + N + L
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-GRGSLSPDLSKVRSNCPKR----MKRL 261
Query: 306 ASRCLQYEPRERPNTKDLVSTLAPLQ 331
+ CL+ + ERP+ +++ + L
Sbjct: 262 MAECLKKKRDERPSFPRILAEIEELA 287
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 3e-23
Identities = 55/265 (20%), Positives = 106/265 (40%), Gaps = 30/265 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-------KQFADEAWGVGKLRHKRLANLIG 137
+V+KGRL +A+K ++F E + + L H + L G
Sbjct: 34 LVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG 90
Query: 138 YCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ +V E++P L L + I+W+++LR+ L IA ++Y ++ P+ H
Sbjct: 91 LMHNPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH 147
Query: 198 -DLNAYRVLFDENGDPRLSC-----FGLMKNSRDGKSYST----NLAYTPPEYL--RNGR 245
DL + + + C FGL S+ + N + PE +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305
T ++ +SF +L +L+G+ P + K I + + L + + ++
Sbjct: 205 YTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 306 ASRCLQYEPRERPNTKDLVSTLAPL 330
C +P++RP+ +V L+ L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 1e-22
Identities = 56/293 (19%), Positives = 109/293 (37%), Gaps = 45/293 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VV K + + + +A+K+ + K F E + ++ H + L G C +
Sbjct: 23 VVCKAKWRA-----KDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--P 73
Query: 145 RLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNA 201
LV EY +L L E A + L ++ + Y S + + L H DL
Sbjct: 74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 202 YRVLFDENGD-PRLSCFGLMKNSRDGKSYSTN----LAYTPPEYLRNGRVTPESVIFSFG 256
+L G ++ FG + D +++ TN A+ PE + + +FS+G
Sbjct: 134 PNLLLVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 190
Query: 257 TVLLDLLSGK------HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310
+L ++++ + P + + L+ + + + L +RC
Sbjct: 191 IILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP---------IESLMTRCW 241
Query: 311 QYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMGD 363
+P +RP+ +++V + L P +E P P G+
Sbjct: 242 SKDPSQRPSMEEIVKIMTHLMRY----------FPGADEPLQYPCQHSLPPGE 284
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 6e-22
Identities = 53/267 (19%), Positives = 91/267 (34%), Gaps = 44/267 (16%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP----KQFADEAWGVGKLRHKRLANLIGYCC 140
VY+ G++ +AVK D + EA L+H + L G C
Sbjct: 22 KVYRAFWI-GDE----VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL 76
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYH-D 198
LV E+ L + L + I + + A+ IA ++Y E P+ H D
Sbjct: 77 KEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRD 133
Query: 199 LNAYRVLFDENGDPRLSC--------FGL--MKNSRDGKSYSTNLAYTPPEYLRNGRVTP 248
L + +L + + FGL + S + A+ PE +R +
Sbjct: 134 LKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSK 193
Query: 249 ESVIFSFGTVLLDLLSGK----HIPPSHALDMIRGKN----ILHLMDSHLEGNFSSEEAT 300
S ++S+G +L +LL+G+ I + I
Sbjct: 194 GSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFA--------- 244
Query: 301 VVFDLASRCLQYEPRERPNTKDLVSTL 327
L C +P RP+ +++ L
Sbjct: 245 ---KLMEDCWNPDPHSRPSFTNILDQL 268
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 8e-22
Identities = 50/286 (17%), Positives = 89/286 (31%), Gaps = 57/286 (19%)
Query: 85 VVYKGRLQDGNDNRRW---IAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYC 139
VY GR W +A++ + K F E + RH+ + +G C
Sbjct: 48 QVYHGR---------WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
++ TL + ++ ++A I + + Y + + H D
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYL--HAKGILHKD 155
Query: 199 LNAYRVLFDEN----GDPRLSCFGL--MKNSRDGKSYSTNL-------AYTPPEYLRNGR 245
L + V +D D FGL + L + PE +R
Sbjct: 156 LKSKNVFYDNGKVVITD-----FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 246 VTPESV---------IFSFGTVLLDLLSGK----HIPPSHALDMIRGKNILHLMDSHLEG 292
E +F+ GT+ +L + + P + + G + + +
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM-GTGMKPNL---SQI 266
Query: 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPS 338
E + D+ C +E ERP L+ L L R S
Sbjct: 267 GMGKE----ISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLS 308
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 3e-21
Identities = 65/357 (18%), Positives = 113/357 (31%), Gaps = 82/357 (22%)
Query: 56 EFSLADLRAATNNFSSDFIVSE--SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
E + ++ +N ++ G VYKG L + R +AVK F+ +
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDE-----RPVAVKVFSFA---N 48
Query: 114 PKQFADEA--WGVGKLRHKRLANLIGYCCDGD-----ERLLVAEYMPNDTLAKHLFHWEN 166
+ F +E + V + H +A I E LLV EY PN +L K+L
Sbjct: 49 RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SL 105
Query: 167 QTIEWAMRLRVALYIAEALDYCSSEGRPLYH--------DLNAYRVLFDENGDPRLSCFG 218
T +W R+A + L Y +E H DLN+ VL +G +S FG
Sbjct: 106 HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165
Query: 219 L--------MKNSRDGKSYSTNLA----YTPPEYLRN-------GRVTPESVIFSFGTVL 259
L + + + + + Y PE L + +++ G +
Sbjct: 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY 225
Query: 260 LDLLSGK------HIPPSHAL---DMIRGKNILHLMDSH---------LEGNFSSEEATV 301
++ P + + + M + V
Sbjct: 226 WEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAV 285
Query: 302 --VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQH 356
+ + C + R + +A L M+ R++ PT H
Sbjct: 286 RSLKETIEDCWDQDAEARLTAQXAEERMAEL----------MMIWERNKSVSPTAHH 332
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 1e-17
Identities = 61/262 (23%), Positives = 98/262 (37%), Gaps = 28/262 (10%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ GRL+ N +AVK + +F EA + + H + LIG C
Sbjct: 130 VFSGRLRADNTL---VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
+V E + L E + L++ A ++Y E + H DL A
Sbjct: 187 IYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYL--ESKCCIHRDLAARN 243
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVTPESVIFSFGT 257
L E ++S FG+ + DG ++ +T PE L GR + ES ++SFG
Sbjct: 244 CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGI 303
Query: 258 VLLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
+L + S P + + L + VF L +C Y
Sbjct: 304 LLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELC---------PDAVFRLMEQCWAY 354
Query: 313 EPRERPNTKDLVSTLAPLQNRP 334
EP +RP+ + L ++ R
Sbjct: 355 EPGQRPSFSTIYQELQSIRKRH 376
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 6e-17
Identities = 54/268 (20%), Positives = 108/268 (40%), Gaps = 26/268 (9%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY+G + + +AVK K + ++F EA + +++H L L+G C
Sbjct: 28 EVYEGVWKKYSLT---VAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
++ E+M L +L Q + + L +A I+ A++Y + H DL A
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARN 141
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
L EN +++ FGL + + A +T PE L + + +S +++FG +
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 259 LLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
L ++ + P S +++ + + + V++L C Q+
Sbjct: 202 LWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-----GCPEK----VYELMRACWQWN 252
Query: 314 PRERPNTKDLVSTLAPLQNRPDVPSYVM 341
P +RP+ ++ + + V
Sbjct: 253 PSDRPSFAEIHQAFETMFQESSISDEVE 280
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 27/271 (9%)
Query: 86 VYKGRLQDGNDNRRW----IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD 141
++KG ++ D + + +K K + F + A + KL HK L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
GDE +LV E++ +L +L I +L VA +A A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 201 AYRVL-----FDENGDPR---LSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRV-TPESV 251
A +L + G+P LS G+ + + PPE + N + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 252 IFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH--LEGNFSSEEATVVFDLASRC 309
+SFGT L ++ SG P L + + L + L ++E + +L + C
Sbjct: 201 KWSFGTTLWEICSGGDKP----LSALDSQRKLQFYEDRHQLPAPKAAE----LANLINNC 252
Query: 310 LQYEPRERPNTKDLVSTLAPLQNRPDVPSYV 340
+ YEP RP+ + ++ L L VP
Sbjct: 253 MDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 5e-16
Identities = 64/265 (24%), Positives = 106/265 (40%), Gaps = 29/265 (10%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V+ G +A+K K P+ F EA + KLRH++L L +
Sbjct: 200 VWMGTWNGTTR----VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPI 253
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
+V EYM +L L + + + +A IA + Y H DL A +
Sbjct: 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANI 311
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL + D + + A +T PE GR T +S ++SFG +L
Sbjct: 312 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 260 LDLLSGKHIP-PSHALDMIRGKNILHLMDS--HLE--GNFSSEEATVVFDLASRCLQYEP 314
+L + +P P + + +L ++ + + DL +C + EP
Sbjct: 372 TELTTKGRVPYPG-----MVNREVLDQVERGYRMPCPPECPES----LHDLMCQCWRKEP 422
Query: 315 RERPNTKDLVSTLAPLQNRPDVPSY 339
ERP + L + L + P Y
Sbjct: 423 EERPTFEYLQAFLEDYFTSTE-PQY 446
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 6e-16
Identities = 51/290 (17%), Positives = 104/290 (35%), Gaps = 29/290 (10%)
Query: 85 VVYKGRLQDGNDNRRW-IAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V+KG ++ + + +K + + D +G L H + L+G C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
LV +Y+P +L H+ + + L + IA+ + Y G + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSF 255
VL +++ FG+ + + E + G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 256 GTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310
G + +L++ G + + D++ L V+ + +C
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI---------DVYMVMVKCW 254
Query: 311 QYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360
+ RP K+L + + P P Y+++ P P+
Sbjct: 255 MIDENIRPTFKELANEFTRMARDP--PRYLVIKRESGPGIAPGPEPHGLT 302
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 7e-16
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 28/260 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VV G+ + D +AVK K +F EA + KL H +L G C
Sbjct: 23 VVKLGKWKGQYD----VAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
+V EY+ N L +L + +E + L + + E + + S H DL A
Sbjct: 78 IYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARN 134
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
L D + ++S FG+ + D + S+ ++ PE + + +S +++FG +
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGIL 194
Query: 259 LLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
+ ++ S +P S + + + L+ S ++ + C
Sbjct: 195 MWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH-----LASDT----IYQIMYSCWHEL 245
Query: 314 PRERPNTKDLVSTLAPLQNR 333
P +RP + L+S++ PL+ +
Sbjct: 246 PEKRPTFQQLLSSIEPLREK 265
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 7e-16
Identities = 53/267 (19%), Positives = 105/267 (39%), Gaps = 26/267 (9%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
VY+G + + +AVK K + ++F EA + +++H L L+G C
Sbjct: 236 VYEGVWKKYSLT---VAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
++ E+M L +L Q + + L +A I+ A++Y + H +L A
Sbjct: 292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNC 349
Query: 205 LFDENGDPRLSCFGL---MKNSRDGKSYSTNLAY--TPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL M T PE L + + +S +++FG +L
Sbjct: 350 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 409
Query: 260 LDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEP 314
++ + P S +++ + + + V++L C Q+ P
Sbjct: 410 WEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-----GCPEK----VYELMRACWQWNP 460
Query: 315 RERPNTKDLVSTLAPLQNRPDVPSYVM 341
+RP+ ++ + + V
Sbjct: 461 SDRPSFAEIHQAFETMFQESSISDEVE 487
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 8e-16
Identities = 52/263 (19%), Positives = 96/263 (36%), Gaps = 25/263 (9%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGDE 144
V++G + +A+K ++ F EA + + H + LIG +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
++ E L L + ++ A + A ++ AL Y S+ H D+ A
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
VL N +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 259 LLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
+ ++L P + + I L + N ++ L ++C Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP-----NCPPT----LYSLMTKCWAYD 632
Query: 314 PRERPNTKDLVSTLAPLQNRPDV 336
P RP +L + L+ + +
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 28/261 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
+V+ G + + +A+K + + F +EA + KL H +L L G C +
Sbjct: 23 LVHLGYWLNKDK----VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
LV E+M + L+ +L + L + L + E + Y + H DL A
Sbjct: 78 ICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARN 134
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
L EN ++S FG+ + D + S+ + PE R + +S ++SFG +
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 259 LLDLLSGKHIP-P----SHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
+ ++ S IP S ++ I L+ S+ V+ + + C +
Sbjct: 195 MWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR-----LASTH----VYQIMNHCWRER 245
Query: 314 PRERPNTKDLVSTLAPLQNRP 334
P +RP L+ LA +
Sbjct: 246 PEDRPAFSRLLRQLAEIAESG 266
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 66/316 (20%), Positives = 109/316 (34%), Gaps = 37/316 (11%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V GRL+ + +A+K + F EA +G+ H + L G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY-H-DLNAY 202
++V EYM N +L L + Q + + IA + Y S G Y H DL A
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAAR 176
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKS--YSTNLA-----YTPPEYLRNGRVTPESVIFSF 255
+L + N ++S FGL + D Y+T +T PE + + T S ++S+
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 256 GTVLLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310
G VL +++S P + + L + + ++ L C
Sbjct: 237 GIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPM-----DCPAA----LYQLMLDCW 287
Query: 311 QYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMGDACSRMD- 369
Q + RP + +VS L L P + R +
Sbjct: 288 QKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDIT---TFRTTGD 344
Query: 370 -LTAIHQILVMTHYKD 384
L + H K+
Sbjct: 345 WLNGVW----TAHCKE 356
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 78.0 bits (192), Expect = 2e-15
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 27/264 (10%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V+ G +A+K K P+ F EA + KLRH++L L +
Sbjct: 283 VWMGTWNGTTR----VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPI 336
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
+V EYM +L L + + + +A IA + Y H DL A +
Sbjct: 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANI 394
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL + D + + A +T PE GR T +S ++SFG +L
Sbjct: 395 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 454
Query: 260 LDLLSGKHIPPSHALDMIRGKNILHLMDS--HLE--GNFSSEEATVVFDLASRCLQYEPR 315
+L + +P + + +L ++ + + DL +C + EP
Sbjct: 455 TELTTKGRVPYPG----MVNREVLDQVERGYRMPCPPECPES----LHDLMCQCWRKEPE 506
Query: 316 ERPNTKDLVSTLAPLQNRPDVPSY 339
ERP + L + L + P Y
Sbjct: 507 ERPTFEYLQAFLEDYFTSTE-PQY 529
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 3e-15
Identities = 59/273 (21%), Positives = 105/273 (38%), Gaps = 28/273 (10%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY G D NR A+K ++ + F E + L H + LIG +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 145 RLL-VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
+ YM + L + + + + L +A ++Y + + H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYLAE--QKFVHRDLAAR 153
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA--------YTPPEYLRNGRVTPESVIFS 254
+ DE+ +++ FGL ++ D + YS +T E L+ R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 255 FGTVLLDLLS-GK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309
FG +L +LL+ G HI P + L + ++ + +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE-----YCPDS----LYQVMQQC 264
Query: 310 LQYEPRERPNTKDLVSTLAPLQNRPDVPSYVML 342
+ +P RP + LV + + + YV L
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALLGDHYVQL 297
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 4e-15
Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 32/262 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V G + +AVK A + F EA + +LRH L L+G +
Sbjct: 36 DVMLGDYRG-----NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 88
Query: 145 RL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
L +V EYM +L +L + L+ +L + EA++Y H DL A
Sbjct: 89 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAAR 146
Query: 203 RVLFDENGDPRLSCFGLMKNSRDG--KSYSTNLAY--TPPEYLRNGRVTPESVIFSFGTV 258
VL E+ ++S FGL +++ + L T PE LR + + +S ++SFG +
Sbjct: 147 NVLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203
Query: 259 LLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
L ++ S G+ IP + + + D V+++ C +
Sbjct: 204 LWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD-----GCPPA----VYEVMKNCWHLD 254
Query: 314 PRERPNTKDLVSTLAPLQNRPD 335
RP+ L L ++
Sbjct: 255 AAMRPSFLQLREQLEHIKTHEL 276
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 4e-15
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALR 459
M + E +++G+ A A+ CYS+ I + + +Y+ RS + A
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYE 59
Query: 460 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
D + + PDW + +A AL L+ ++A +E E
Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 4e-15
Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 28/253 (11%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V+ +AVK K + F EA + L+H +L L +
Sbjct: 204 VWMATYNKHTK----VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPI 257
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
++ E+M +L L E + + IAE + + H DL A +
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANI 315
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L + +++ FGL + D + + A +T PE + G T +S ++SFG +L
Sbjct: 316 LVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375
Query: 260 LDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEP 314
+++++ IP + + + + N E ++++ RC + P
Sbjct: 376 MEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE-----NCPEE----LYNIMMRCWKNRP 426
Query: 315 RERPNTKDLVSTL 327
ERP + + S L
Sbjct: 427 EERPTFEYIQSVL 439
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 5e-15
Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 27/284 (9%)
Query: 86 VYKGRLQDGNDNRRW-IAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VYKG L+ + + +A+K F EA +G+ H + L G
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
+++ EYM N L K L + + + + IA + Y ++ H DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAAR 176
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKS--YSTNLA-----YTPPEYLRNGRVTPESVIFSF 255
+L + N ++S FGL + D Y+T+ +T PE + + T S ++SF
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236
Query: 256 GTVLLDLLSGKHIP-P----SHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 310
G V+ ++++ P + I L + S ++ L +C
Sbjct: 237 GIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM-----DCPSA----IYQLMMQCW 287
Query: 311 QYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTP 354
Q E RP D+VS L L PD + PR P+
Sbjct: 288 QQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPST 331
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 6e-15
Identities = 52/263 (19%), Positives = 95/263 (36%), Gaps = 25/263 (9%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGD 143
V++G + +A+K ++ F EA + + H + LIG +
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITEN 88
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
++ E L L + ++ A + A ++ AL Y S+ H D+ A
Sbjct: 89 PVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 145
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGT 257
VL N +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205
Query: 258 VLLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
+ ++L P + + I L + N ++ L ++C Y
Sbjct: 206 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP-----NCPPT----LYSLMTKCWAY 256
Query: 313 EPRERPNTKDLVSTLAPLQNRPD 335
+P RP +L + L+ +
Sbjct: 257 DPSRRPRFTELKAQLSTILEEEK 279
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 1e-14
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 56/295 (18%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEA--WGVGKLRHKRLANLIGYCCDGD 143
V+ G+ + +AVK F + + E + +RH+ + I G
Sbjct: 53 VWMGKWRGEK-----VAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAADIKGT 104
Query: 144 ER----LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-- 197
L+ +Y N +L +L ++ T++ L++A L + +E
Sbjct: 105 GSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 198 -----DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--------LAYTPPEYLRNG 244
DL + +L +NG ++ GL + Y PPE L +
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL-DE 220
Query: 245 RVTPESV-------IFSFGTVLLDLLSGKHIPPSHA------LDMIRGKNILHLMDS--- 288
+ ++SFG +L ++ D++ M
Sbjct: 221 SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVC 280
Query: 289 ------HLEGNFSSEEATVVF-DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 336
+SS+E L + C + P R + TLA + D+
Sbjct: 281 IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 1e-14
Identities = 50/294 (17%), Positives = 96/294 (32%), Gaps = 54/294 (18%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEA--WGVGKLRHKRLANLIGYCCDGD 143
V++G+ + +AVK F+ + + + EA + LRH+ + I +
Sbjct: 58 VWRGKWRG-----EEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 144 ----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-- 197
+ LV++Y + +L +L T+ +++AL A L + E
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 198 -----DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA--------YTPPEYLRNG 244
DL + +L +NG ++ GL Y PE L +
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226
Query: 245 RVTPESV------IFSFGTVLLDLLSGKHI---PPSHAL---DMIRGKNILHLMDS---- 288
I++ G V ++ I + L D++ + M
Sbjct: 227 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 286
Query: 289 -----HLEGNFSSEEATVVF-DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 336
++ + S EA V + C R + TL+ L + +
Sbjct: 287 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 1e-14
Identities = 68/345 (19%), Positives = 126/345 (36%), Gaps = 58/345 (16%)
Query: 21 HHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFSSDFIVSESGE 80
HHH + + PT + +G+ G A +F L+ + + G+
Sbjct: 5 HHHHHHDYDIPTTENLYFQGAMGSAFEDRDPT---QFEERHLK----------FLQQLGK 51
Query: 81 KAPNVVYKGRLQDGNDNRRWI-AVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGY 138
V R DN + AVKK +H+ + + F E + L+H + G
Sbjct: 52 GNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 110
Query: 139 CCDGDER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
C R L+ EY+P +L +L + + I+ L+ I + ++Y + +
Sbjct: 111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGT--KRYI 167
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEYLRN 243
H DL +L + ++ FGL K K Y Y PE L
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEY-----YKVKEPGESPIFWYAPESLTE 222
Query: 244 GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR--------GKNILHLMDSHLEG--- 292
+ + S ++SFG VL +L + S + +R + HL++
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 282
Query: 293 ----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333
E ++ + + C +RP+ +DL + ++++
Sbjct: 283 PRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 1e-14
Identities = 63/262 (24%), Positives = 104/262 (39%), Gaps = 34/262 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V G +AVK A + F EA + +LRH L L+G +
Sbjct: 209 VMLGDY-----RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 261
Query: 146 L-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
L +V EYM +L +L + L+ +L + EA++Y H DL A
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARN 319
Query: 204 VLFDENGDPRLSCFGLMKNSRD--GKSYSTNLAY--TPPEYLRNGRVTPESVIFSFGTVL 259
VL E+ ++S FGL +++ + L T PE LR + + +S ++SFG +L
Sbjct: 320 VLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376
Query: 260 LDLLS-GKH----IPPSHALDMI-RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
++ S G+ IP + + +G + MD+ V+D+ C +
Sbjct: 377 WEIYSFGRVPYPRIPLKDVVPRVEKG----YKMDA--PDGCPPA----VYDVMKNCWHLD 426
Query: 314 PRERPNTKDLVSTLAPLQNRPD 335
RP L L ++
Sbjct: 427 AATRPTFLQLREQLEHIRTHEL 448
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 1e-14
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 28/254 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VV G+ + D +A+K K +F +EA + L H++L L G C
Sbjct: 39 VVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 93
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
++ EYM N L +L + L + + EA++Y S+ H DL A
Sbjct: 94 IFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARN 150
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
L ++ G ++S FGL + D + S+ + ++PPE L + + +S I++FG +
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 259 LLDLLSGKHIP-P----SHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
+ ++ S +P S + I L+ S + V+ + C +
Sbjct: 211 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH-----LASEK----VYTIMYSCWHEK 261
Query: 314 PRERPNTKDLVSTL 327
ERP K L+S +
Sbjct: 262 ADERPTFKILLSNI 275
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 1e-14
Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 464
E + +G+ F++ ++ TA+ Y++ + + +Y+ R+ C + AL D
Sbjct: 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTC 73
Query: 465 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+ + + +A L + A ++A ++
Sbjct: 74 IRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-14
Identities = 59/293 (20%), Positives = 102/293 (34%), Gaps = 39/293 (13%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VY+G++ ++ + AVK + D F EA + K H+ + IG
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 143 DERLLVAEYMPNDTLAKHL-----FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
R ++ E M L L + ++ L VA IA Y H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE--NHFIH 163
Query: 198 -DLNAYRVLFDENGDPRLSC---FGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVT 247
D+ A L G R++ FG+ ++ Y + PPE G T
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 223
Query: 248 PESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302
++ +SFG +L ++ S G L+ + + N V
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-----NCPGP----V 274
Query: 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQ 355
+ + ++C Q++P +RPN ++ + PDV + E P +
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-----INTALPIEYGPLVE 322
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 3e-14
Identities = 54/279 (19%), Positives = 105/279 (37%), Gaps = 34/279 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY G L D + + AVK + + QF E + H + +L+G C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 145 -RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
L+V YM + L + E + L +A+ + + +S+ H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY-----------TPPEYLRNGRVTPESV 251
+ DE +++ FGL +RD + + E L+ + T +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 252 IFSFGTVLLDLLS-GK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306
++SFG +L +L++ G + + L + ++++
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE-----YCPDP----LYEVM 329
Query: 307 SRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 345
+C + RP+ +LVS ++ + + YV +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNAT 368
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 3e-14
Identities = 62/301 (20%), Positives = 112/301 (37%), Gaps = 47/301 (15%)
Query: 86 VYKGRLQDGNDNRRWIAVK--KFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V + +L+ + + +AVK K A D ++F EA + + H +A L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 144 ER------LLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193
+ +++ +M + L + +R + IA ++Y SS R
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS--R 156
Query: 194 PLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEY 240
H DL A + E+ ++ FGL SR YS + Y E
Sbjct: 157 NFIHRDLAARNCMLAEDMTVCVADFGL---SRK--IYSGD-YYRQGCASKLPVKWLALES 210
Query: 241 LRNGRVTPESVIFSFGTVLLDLLS-GK----HIPPSHALDMIRGKNILHLMDSHLEGNFS 295
L + T S +++FG + ++++ G+ I + + + G N L
Sbjct: 211 LADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPP-----ECM 265
Query: 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQ 355
E V+DL +C +P++RP+ L L + V S + + E
Sbjct: 266 EE----VYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYINIERAHHHH 321
Query: 356 H 356
H
Sbjct: 322 H 322
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-14
Identities = 51/274 (18%), Positives = 106/274 (38%), Gaps = 33/274 (12%)
Query: 85 VVYKGRLQDGNDNRRW-IAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG + + +A+K+ + P K+ DEA+ + + + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
L+ + MP L ++ I L + IA+ ++Y L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSF 255
VL +++ FGL K + + + E + + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 256 GTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSHLEG------NFSSEEATVVFDLASR 308
G + +L++ P I I +++ +G + + V+ + +
Sbjct: 206 GVTVWELMTFGSKPYDG-----IPASEISSILE---KGERLPQPPICTID---VYMIMRK 254
Query: 309 CLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVML 342
C + RP ++L+ + + P Y+++
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDP--QRYLVI 286
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 5e-14
Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 25/263 (9%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGD 143
VY+G + + +AVK K D K+ F EA + L H + LIG + +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
++ E P L +L +N + + +L I +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGT 257
+L +L FGL + D Y ++ + PE + R T S ++ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 258 VLLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
+ ++LS P + ++ + L D ++ L +RC Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD-----LCPPV----LYTLMTRCWDY 253
Query: 313 EPRERPNTKDLVSTLAPLQNRPD 335
+P +RP +LV +L+ +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 57/286 (19%), Positives = 103/286 (36%), Gaps = 53/286 (18%)
Query: 85 VVYKGRLQDGNDNRR-WIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDG 142
V R DN +AVKK +H+ + + F E + L+H + G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 83
Query: 143 DER--LLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
R L+ EY+P D L KH + I+ L+ I + ++Y + +
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGMEYLGT--KRYI 136
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEYLRN 243
H DL +L + ++ FGL K K + + PE L
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEF-----FKVKEPGESPIFWYAPESLTE 191
Query: 244 GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR--------GKNILHLMDSHLEG--- 292
+ + S ++SFG VL +L + S + +R + HL++
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 293 ----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334
E ++ + + C +RP+ +DL + +++
Sbjct: 252 PRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 59/296 (19%), Positives = 111/296 (37%), Gaps = 39/296 (13%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VY+G + + A+K + A + +F +EA + + + L+G G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 143 DERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLR----VALYIAEALDYCSSEGRP 194
L++ E M L N + L +A IA+ + Y ++
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA--NK 158
Query: 195 LYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVT 247
H DL A + E+ ++ FG+ ++ + Y + PE L++G T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 248 PESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302
S ++SFG VL ++ + + + L + +L D N +
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD-----NCPDM----L 269
Query: 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEE-APPTPQHP 357
F+L C QY P+ RP+ +++S++ P + + EE P P+
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEME----PGFREVSFYYSEENKLPEPEEL 321
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 7e-14
Identities = 54/258 (20%), Positives = 103/258 (39%), Gaps = 28/258 (10%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY G L D + + AVK + + QF E + H + +L+G C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 145 -RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
L+V YM + L + E + L +A+ + Y +S+ H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY--------TPPEYLRNGRVTPESVIFS 254
+ DE +++ FGL ++ D + YS + E L+ + T +S ++S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 255 FGTVLLDLLS-GK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309
FG +L +L++ G + + L + + + ++++ +C
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE------YCPDP---LYEVMLKC 268
Query: 310 LQYEPRERPNTKDLVSTL 327
+ RP+ +LVS +
Sbjct: 269 WHPKAEMRPSFSELVSRI 286
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 7e-14
Identities = 60/265 (22%), Positives = 100/265 (37%), Gaps = 29/265 (10%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V+ G +AVK K P F EA + +L+H+RL L +
Sbjct: 29 VWMGYYNGHTK----VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPI 82
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
++ EYM N +L L + L +A IAE + + H DL A +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANI 140
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L + +++ FGL + D + + A +T PE + G T +S ++SFG +L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 260 LDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEP 314
++++ IP + + + D N E ++ L C + P
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD-----NCPEE----LYQLMRLCWKERP 251
Query: 315 RERPNTKDLVSTLAPLQNRPDVPSY 339
+RP L S L + Y
Sbjct: 252 EDRPTFDYLRSVLEDFFTATE-GQY 275
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 9e-14
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 464
E +++G+ F +++ A CY + I + Y R+LC+L QP+ AL D +A
Sbjct: 11 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRA 69
Query: 465 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+ A + +++ + +A L+ A SL
Sbjct: 70 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 107
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 9e-14
Identities = 62/300 (20%), Positives = 103/300 (34%), Gaps = 53/300 (17%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VY+G++ ++ + AVK + D F EA + K H+ + IG
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 143 DERLLVAEYMPNDTLAKHL-----FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
R ++ E M L L + ++ L VA IA Y H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE--NHFIH 204
Query: 198 -DLNAYRVLFDENGDPRLSC---FGLMKNSRDGKSYSTNLAY-------------TPPEY 240
D+ A L G R++ FG+ +RD Y Y PPE
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGM---ARD--IYRAG--YYRKGGCAMLPVKWMPPEA 257
Query: 241 LRNGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFS 295
G T ++ +SFG +L ++ S G L+ + + N
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK-----NCP 312
Query: 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQ 355
V+ + ++C Q++P +RPN ++ + PDV + E P +
Sbjct: 313 GP----VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-----INTALPIEYGPLVE 363
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 69/281 (24%), Positives = 108/281 (38%), Gaps = 37/281 (13%)
Query: 86 VYKGRLQDGNDNRRWI-AVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V ND + AVK A P + E + L H+ + G C D
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 144 ER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
LV EY+P +L +L +I A L A I E + Y + + H DL
Sbjct: 107 AASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHA--QHYIHRDLA 161
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSY---STN----LAYTPPEYLRNGRVTPESVIF 253
A VL D + ++ FGL K +G Y + + + PE L+ + S ++
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 254 SFGTVLLDLLS---GKHIPPSHALDMIR----GKNILHLMDSHLEG-------NFSSEEA 299
SFG L +LL+ PP+ L++I +L L + G +E
Sbjct: 222 SFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE-- 279
Query: 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPL--QNRPDVPS 338
V+ L C + E RP ++L+ L + + + PS
Sbjct: 280 --VYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPS 318
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 52/292 (17%), Positives = 107/292 (36%), Gaps = 33/292 (11%)
Query: 85 VVYKGRLQDGNDNRRW-IAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG + + +A+K+ + P K+ DEA+ + + + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
L+ + MP L ++ I L + IA+ ++Y L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSF 255
VL +++ FGL K + + + E + + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 256 GTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSHLEGN------FSSEEATVVFDLASR 308
G + +L++ P I I +++ +G + + V+ + +
Sbjct: 206 GVTVWELMTFGSKPYDG-----IPASEISSILE---KGERLPQPPICTID---VYMIMVK 254
Query: 309 CLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360
C + RP ++L+ + + P Y+++ P
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDPQ--RYLVIQGDERMHLPSPTDSNFYR 304
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 53/275 (19%), Positives = 105/275 (38%), Gaps = 35/275 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVK--KFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +G L+ + +AVK K + + ++F EA + H + L+G C +
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 144 -----ERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
+ +++ +M L + I L+ + IA ++Y S+ R
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN--RN 167
Query: 195 LYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVT 247
H DL A + ++ ++ FGL K G Y + E L + T
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT 227
Query: 248 PESVIFSFGTVLLDLLS-GK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302
+S +++FG + ++ + G + D + + L + + E +
Sbjct: 228 SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE-----DCLDE----L 278
Query: 303 FDLASRCLQYEPRERPNTKDLVSTLAP-LQNRPDV 336
+++ C + +P +RP L L L++ PDV
Sbjct: 279 YEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDV 313
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 1e-13
Identities = 20/99 (20%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 463
L + +G+ F++ ++ A+ Y++ I +Y+ R+ C+ + AL+D +
Sbjct: 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEE 75
Query: 464 AQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+ P + + +A AL + + A D+ ++A L+
Sbjct: 76 CIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 59/266 (22%), Positives = 94/266 (35%), Gaps = 28/266 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V GRL+ +A+K + F EA +G+ H + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY-H-DLNA 201
++V EYM N +L L + Q + + + + Y S G Y H DL A
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAA 179
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-------YTPPEYLRNGRVTPESVIFS 254
VL D N ++S FGL + D + +T PE + + S ++S
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239
Query: 255 FGTVLLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309
FG V+ ++L+ P + + L + L C
Sbjct: 240 FGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPM-----GCPHA----LHQLMLDC 290
Query: 310 LQYEPRERPNTKDLVSTLAPLQNRPD 335
+ +RP +VS L L P+
Sbjct: 291 WHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 1e-13
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 398 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAA 457
++ E + + + F+ K+++ A+ YSQ I++ + Y RSL +L + A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYA 66
Query: 458 LRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
L DA +A + + +Y +A + L + A + ++
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 2e-13
Identities = 52/288 (18%), Positives = 90/288 (31%), Gaps = 54/288 (18%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEA--WGVGKLRHKRLANLIGYCCDGD 143
V++G Q +AVK F+ D K + E + LRH+ + I
Sbjct: 24 VWRGSWQG-----ENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 144 ----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-- 197
+ L+ Y +L +L + T++ LR+ L IA L + E
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 198 -----DLNAYRVLFDENGDPRLSCFGL----MKNSRDGKSYSTNLA----YTPPEYLRNG 244
DL + +L +NG ++ GL +++ + Y PE L
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 245 RVTPESV------IFSFGTVLLDLLSGKH---IPPSHAL---DMIRGKNILHLMDSH--- 289
I++FG VL ++ I + D++ M
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV 252
Query: 290 ------LEGNFSSEEATVVF-DLASRCLQYEPRERPNTKDLVSTLAPL 330
+ + S+ L C P R + TL +
Sbjct: 253 DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 2e-13
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 464
+ + G+ A KE+ A+D Y+Q + + +P + R+ + Q + A DA A
Sbjct: 13 KLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELA 71
Query: 465 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
V P +S A+ +A + +K A + ++ E
Sbjct: 72 TVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 4e-13
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 464
E +++G+ F +++ A CY + I + Y R+LC+L QP+ AL D +A
Sbjct: 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRA 64
Query: 465 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 508
+ A + +++ + +A L+ A SL ++++ +
Sbjct: 65 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 5e-13
Identities = 69/290 (23%), Positives = 108/290 (37%), Gaps = 62/290 (21%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V+ + + + AVK + + + F EA + L+H+ + G C +G
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 144 ERLLVAEYMPNDTLAKHL-------------FHWENQTIEWAMRLRVALYIAEALDYCSS 190
L+V EYM + L + L + L VA +A + Y +
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 191 EGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLAY--------- 235
H DL L + GD FG+ SRD YST+ Y
Sbjct: 177 LH--FVHRDLATRNCLVGQGLVVKIGD-----FGM---SRD--IYSTD--YYRVGGRTML 222
Query: 236 ----TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLM 286
PPE + + T ES ++SFG VL ++ + GK + + A+D I L
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 282
Query: 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 336
E V+ + C Q EP++R + KD+ + L L P V
Sbjct: 283 R-----ACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 323
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 6e-13
Identities = 57/259 (22%), Positives = 93/259 (35%), Gaps = 28/259 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCCD 141
VV +G + +AVK P+ F E + L H+ L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
+V E P +L L R A+ +AE + Y S+ H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 201 AYRVLFDENGDPRLSCFGLMKN-SRDGKSYSTN------LAYTPPEYLRNGRVTPESVIF 253
A +L ++ FGLM+ ++ Y A+ PE L+ + S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 254 SFGTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSH---LEGNFSSEEAT-VVFDLASR 308
FG L ++ + P + G ILH +D L E+ ++++ +
Sbjct: 209 MFGVTLWEMFTYGQEPWIG-----LNGSQILHKIDKEGERLP---RPEDCPQDIYNVMVQ 260
Query: 309 CLQYEPRERPNTKDLVSTL 327
C ++P +RP L L
Sbjct: 261 CWAHKPEDRPTFVALRDFL 279
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 8e-13
Identities = 62/273 (22%), Positives = 104/273 (38%), Gaps = 43/273 (15%)
Query: 86 VYKGRLQDGNDNRR-WIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V R DN +AVK + E + L H+ + G C +
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 144 ER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
L+ E++P+ +L ++L +N+ I +L+ A+ I + +DY S R H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGS--RQYVHRDLA 153
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEYLRNGRVTP 248
A VL + ++ FGL K K Y Y PE L +
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEY-----YTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 249 ESVIFSFGTVLLDLLS-GKHIPPSHALDMIR------GKNILHLMDSHLEG-------NF 294
S ++SFG L +LL+ AL + + L+++ EG N
Sbjct: 209 ASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNC 268
Query: 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
E V+ L +C +++P R + ++L+
Sbjct: 269 PDE----VYQLMRKCWEFQPSNRTSFQNLIEGF 297
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 69.6 bits (170), Expect = 9e-13
Identities = 51/257 (19%), Positives = 98/257 (38%), Gaps = 28/257 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +G + +A+K + D ++ EA + +L + + LIG C +
Sbjct: 351 SVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAE 408
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
+LV E L K L + + I + + ++ + Y + H +L A
Sbjct: 409 ALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAAR 465
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSF 255
VL ++S FGL K SY T L + PE + + + S ++S+
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 525
Query: 256 GTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDS--HLEG--NFSSEEATVVFDLASRCL 310
G + + LS P ++G ++ ++ +E E ++ L S C
Sbjct: 526 GVTMWEALSYGQKPYKK-----MKGPEVMAFIEQGKRMECPPECPPE----LYALMSDCW 576
Query: 311 QYEPRERPNTKDLVSTL 327
Y+ +RP+ + +
Sbjct: 577 IYKWEDRPDFLTVEQRM 593
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 1e-12
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 394 QEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV--GTMVSPTVYARRSLCHLMC 451
+ T + + RK G+ F+ ++ A+ Y+Q + + ++ R+ CHL
Sbjct: 19 RPATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKL 78
Query: 452 DQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+ D A +A +A A Y ++ AL KL A L+ SLE
Sbjct: 79 EDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 64/312 (20%), Positives = 100/312 (32%), Gaps = 63/312 (20%)
Query: 86 VYKGRLQDGNDNRR-WIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V R DN +AVK+ +H+ PD + F E + L + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG 97
Query: 144 ER--LLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ LV EY+P+ D L +H ++ + L + I + ++Y S R H
Sbjct: 98 RQSLRLVMEYLPSGCLRDFLQRH-----RARLDASRLLLYSSQICKGMEYLGS--RRCVH 150
Query: 198 -DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEYLRNG 244
DL A +L + +++ FGL K K Y Y PE L +
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDY-----YVVREPGQSPIFWYAPESLSDN 205
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA----- 299
+ +S ++SFG VL +L + S M +
Sbjct: 206 IFSRQSDVWSFGVVLYELFTYCDKSCS-------PSAEFLRMMGCERDVPALSRLLELLE 258
Query: 300 ------------TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRH 347
V +L C P++RP+ L L L +
Sbjct: 259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR-GCET----HAF 313
Query: 348 EEAPPTPQHPLS 359
P H LS
Sbjct: 314 TAHPEGKHHSLS 325
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 55/259 (21%), Positives = 98/259 (37%), Gaps = 32/259 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCCD 141
V KG Q + +AVK K+ DP EA + +L + + +IG C+
Sbjct: 32 TVKKGYYQMKKVVKT-VAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICE 88
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
+ +LV E L K+L +N+ ++ + + ++ + Y H DL
Sbjct: 89 AESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLA 144
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIF 253
A VL ++S FGL K R ++Y + + PE + + + +S ++
Sbjct: 145 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 254 SFGTVLLDLLSGKHIP-----PSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308
SFG ++ + S P S M+ + E ++DL +
Sbjct: 205 SFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-----GCPRE----MYDLMNL 255
Query: 309 CLQYEPRERPNTKDLVSTL 327
C Y+ RP + L
Sbjct: 256 CWTYDVENRPGFAAVELRL 274
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 60/277 (21%), Positives = 103/277 (37%), Gaps = 39/277 (14%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V+ + + + + AVK K F EA + L+H+ + G C DGD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 144 ERLLVAEYMPN--------------DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS 189
++V EYM + L + + L +A IA + Y +
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 150
Query: 190 SEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLR 242
S + H DL L N ++ FG+ ++ Y + PPE +
Sbjct: 151 S--QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 208
Query: 243 NGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSE 297
+ T ES ++SFG +L ++ + GK + + ++ I +L E
Sbjct: 209 YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPR-----VCPKE 263
Query: 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334
V+D+ C Q EP++R N K++ L L
Sbjct: 264 ----VYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 67.7 bits (165), Expect = 2e-12
Identities = 36/221 (16%), Positives = 66/221 (29%), Gaps = 42/221 (19%)
Query: 144 ERLLVAEYMPND--TLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
R + M ++ T + L ++++ RL++ L + L G L H
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTY 231
Query: 199 L---NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYL-----------RNG 244
L + ++ D+ G L+ F + S + + PPE R
Sbjct: 232 LRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRT 288
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG--NFSSEEATVV 302
+T ++ G V+ + P I L + N V
Sbjct: 289 LMTFSFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRSCKNIPQP----V 336
Query: 303 FDLASRCLQYEPRERPNTKDLVST----LAPLQNRPDVPSY 339
L L+Y +R + T + +P Y
Sbjct: 337 RALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLY 377
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 3e-12
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 464
EAR G F + ++ AV Y++ I Y+ R+ A+ D +A
Sbjct: 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKA 64
Query: 465 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
P++ A+ +A A + + A + L A + +
Sbjct: 65 IEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 67.0 bits (163), Expect = 4e-12
Identities = 34/234 (14%), Positives = 66/234 (28%), Gaps = 36/234 (15%)
Query: 146 LLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DL--- 199
L T + L ++++ RL++ L + L G L H L
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPV 240
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYL----------RNGRVTPE 249
+ ++ D+ G L+ F + + PPE +T
Sbjct: 241 D---IVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-SEEATVVFDLASR 308
++ G + + P L + + + L
Sbjct: 298 FDTWTLGLAIYWIWCAD--LP------NTDDAALGGSEWIFRSCKNIPQPVR---ALLEG 346
Query: 309 CLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMG 362
L+Y +R + T Q R ++ + + L + PT + P G
Sbjct: 347 FLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQT---DGEPTREGGAPPSG 397
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 4e-12
Identities = 52/257 (20%), Positives = 98/257 (38%), Gaps = 28/257 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +G + +A+K + D ++ EA + +L + + LIG C +
Sbjct: 25 SVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAE 82
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
+LV E L K L + + I + + ++ + Y + H DL A
Sbjct: 83 ALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAAR 139
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSF 255
VL ++S FGL K SY T L + PE + + + S ++S+
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 199
Query: 256 GTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDS--HLEG--NFSSEEATVVFDLASRCL 310
G + + LS P ++G ++ ++ +E E ++ L S C
Sbjct: 200 GVTMWEALSYGQKPYKK-----MKGPEVMAFIEQGKRMECPPECPPE----LYALMSDCW 250
Query: 311 QYEPRERPNTKDLVSTL 327
Y+ +RP+ + +
Sbjct: 251 IYKWEDRPDFLTVEQRM 267
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 4e-12
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPT---VYARRSLCHLMCDQPDAALRDA 461
+ G+ + + F+ AV Y + I+ ++P + R+ + A++D
Sbjct: 14 RLKTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDC 69
Query: 462 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+A C+ P +S A+ +AL+ L+ H +A K+A L+
Sbjct: 70 ERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELD 110
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 8e-12
Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 31/254 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VYKG + +A + + ++F +EA + L+H +
Sbjct: 42 VYKGL---DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV 98
Query: 144 ER----LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
+ +LV E M + TL +L + ++ + I + L + + P+ H D
Sbjct: 99 KGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRD 156
Query: 199 LNAYRVLFD-ENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIF 253
L + G ++ GL R + + + TP PE ++
Sbjct: 157 LKCDNIFITGPTGSVKIGDLGLATLKRASFAKA--VIGTPEFMAPEMYEEK-YDESVDVY 213
Query: 254 SFGTVLLDLLSGKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 309
+FG +L++ + ++ + + + + + E V ++ C
Sbjct: 214 AFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---KPASFDKVAIPE----VKEIIEGC 266
Query: 310 LQYEPRERPNTKDL 323
++ ER + KDL
Sbjct: 267 IRQNKDERYSIKDL 280
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 67/288 (23%), Positives = 111/288 (38%), Gaps = 45/288 (15%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143
V K R+ + R A+K+ ++A D + FA E + KL H + NL+G C
Sbjct: 41 VLKARI-KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99
Query: 144 ERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEALDYCS 189
L EY P+ L L + T+ L A +A +DY S
Sbjct: 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 159
Query: 190 SEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLR 242
+ H DL A +L EN +++ FGL SR + Y + E L
Sbjct: 160 Q--KQFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLN 214
Query: 243 NGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSE 297
T S ++S+G +L +++S G + + + + L N E
Sbjct: 215 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL-----NCDDE 269
Query: 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 345
V+DL +C + +P ERP+ ++ +L + +YV +
Sbjct: 270 ----VYDLMRQCWREKPYERPSFAQILVSLNRMLEER--KTYVNTTLY 311
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 6e-11
Identities = 58/298 (19%), Positives = 107/298 (35%), Gaps = 55/298 (18%)
Query: 86 VYKGRLQD--GNDNRRWI--AVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYC 139
V + + + AVK A D E + + +HK + NL+G C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 140 CDGDERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEAL 185
++ EY L ++L + + + + +A +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY--------- 235
+Y +S + H DL A VL EN +++ FGL +RD + + Y
Sbjct: 171 EYLAS--QKCIHRDLAARNVLVTENNVMKIADFGL---ARD--INNID-YYKKTTNGRLP 222
Query: 236 ---TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMD 287
PE L + T +S ++SFG ++ ++ + G IP +++ + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
Query: 288 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 345
N ++E ++ + C P +RP K LV L + Y+ L P
Sbjct: 283 -----NCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 7e-11
Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 16/193 (8%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVL 205
+ E+ TL + + + ++ + L + I + +DY S+ L + DL +
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 206 FDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGRVTPESVIFSFGTVLLDL 262
+ ++ FGL+ + ++ + + L Y PE + + E +++ G +L +L
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 263 LSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 322
L A + K L D + F +E T++ + L +P +RPNT +
Sbjct: 215 LH----VCDTAFET--SKFFTDLRDGIISDIFDKKEKTLL----QKLLSKKPEDRPNTSE 264
Query: 323 LVSTLAPLQNRPD 335
++ TL + P+
Sbjct: 265 ILRTLTVWKKSPE 277
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 60/276 (21%), Positives = 102/276 (36%), Gaps = 40/276 (14%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG L + A+K A P ++F EA +L+H + L+G
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 143 DERLLVAEYMPN--------------DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC 188
++ Y + D + +E + + IA ++Y
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144
Query: 189 SSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYL 241
SS + H DL VL + + ++S GL + Y + PE +
Sbjct: 145 SSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI 202
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHA----LDMIRGKNILHLMDSHLEGNFSS 296
G+ + +S I+S+G VL ++ S P ++ ++MIR + +L D + +
Sbjct: 203 MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPD-----DCPA 257
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332
V+ L C P RP KD+ S L N
Sbjct: 258 W----VYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 61.2 bits (148), Expect = 3e-10
Identities = 38/285 (13%), Positives = 68/285 (23%), Gaps = 51/285 (17%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYC-- 139
VV+ R + A+K FT A ++ + + +L +
Sbjct: 77 VVFLVRDVE---RLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRL 133
Query: 140 ------------------------CDGDERLLVAEYMPND--TLAKHLFHW--ENQTIEW 171
LL+ D L L
Sbjct: 134 LLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGI 193
Query: 172 AMRLRVALYIAEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGL-MKNSRDG 226
+ + S+G L H N + +G L K G
Sbjct: 194 LALHILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRG 248
Query: 227 KSYSTNLAYTPPEYL--RNGRVTPESVIFSFGTVLLDLLSGK---HIPPSHALDMIRGKN 281
+ S + Y P E+L T + G + + + + +
Sbjct: 249 PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS 308
Query: 282 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326
+ L + V L R L ++ R R + + T
Sbjct: 309 LRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-10
Identities = 39/206 (18%), Positives = 78/206 (37%), Gaps = 18/206 (8%)
Query: 126 KLRHKRLANLIGY---CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA 182
++H N++ Y + +V +Y L K + + + L + I
Sbjct: 79 NMKHP---NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 183 EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----P 238
AL + + L+ D+ + + ++G +L FG+ + + TP P
Sbjct: 136 LALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-GKNILHLMDSHLEGNFSSE 297
E N +S I++ G VL +L + K A M I+ + ++S +
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLK--HAFEAGSMKNLVLKIISGSFPPVSLHYSYD 252
Query: 298 EATVVFDLASRCLQYEPRERPNTKDL 323
+ L S+ + PR+RP+ +
Sbjct: 253 ----LRSLVSQLFKRNPRDRPSVNSI 274
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 4e-10
Identities = 48/219 (21%), Positives = 79/219 (36%), Gaps = 35/219 (15%)
Query: 126 KLRHKRLANLIGYC-----CDGDERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVA 178
+L+H N++ Y +V EY LA + E Q ++ LRV
Sbjct: 61 ELKHP---NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 179 LYIAEALDYCSSEGRPLYH----DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234
+ AL C + DL V D + +L FGL + S++
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV 177
Query: 235 YTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL 290
TP PE + +S I+S G +L +L + PP + L
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PP------FTAFSQKELAGKIR 229
Query: 291 EGNFS------SEEATVVFDLASRCLQYEPRERPNTKDL 323
EG F S+E ++ +R L + RP+ +++
Sbjct: 230 EGKFRRIPYRYSDELN---EIITRMLNLKDYHRPSVEEI 265
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 4e-10
Identities = 43/203 (21%), Positives = 71/203 (34%), Gaps = 39/203 (19%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVL 205
+ EY N TL + H EN + R+ I EAL Y S+G + H DL +
Sbjct: 92 IQMEYCENGTLYDLI-HSENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIF 148
Query: 206 FDENGDPRLSCFGLMKNSRDGKSYSTNLA------------------YTPPEYLRN-GRV 246
DE+ + ++ FGL KN + Y E L G
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 247 TPESVIFSFGTVLLDLLSGKHIPPSHA------LDMIRGKNILHLMDSHLEGNFSSEEAT 300
+ ++S G + +++ P S L +R +I + N E
Sbjct: 209 NEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIE--FPPDFDDNKMKVEK- 261
Query: 301 VVFDLASRCLQYEPRERPNTKDL 323
+ + ++P +RP + L
Sbjct: 262 ---KIIRLLIDHDPNKRPGARTL 281
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 6e-10
Identities = 46/263 (17%), Positives = 82/263 (31%), Gaps = 45/263 (17%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR----HKRLANLIGYCC 140
+VY+G + R +AVK+ + + E V LR H +
Sbjct: 40 IVYRGMFDN-----RDVAVKRILPECFSFADR---E---VQLLRESDEHPNVIRYFCTEK 88
Query: 141 DGDERLLVAEYMP---NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
D + + E + + + F ++ L + S + H
Sbjct: 89 DRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ-----QTTSGLAHLHSLN--IVH 141
Query: 198 -DLNAYRVLFDENGD-----PRLSCFGLMKNSRDGKSYSTNLA-------YTPPEYLR-- 242
DL + +L +S FGL K G+ + + + PE L
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 243 -NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG-NFSSEEAT 300
T IFS G V ++S P +L + L A
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIAR 261
Query: 301 VVFDLASRCLQYEPRERPNTKDL 323
+L + + +P++RP+ K +
Sbjct: 262 ---ELIEKMIAMDPQKRPSAKHV 281
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 6e-10
Identities = 62/290 (21%), Positives = 106/290 (36%), Gaps = 70/290 (24%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V K + AVK ++A P + + E + ++ H + L G C
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 143 DERLLVAEYMPNDTLAKHL----------------------FHWENQTIEWAMRLRVALY 180
LL+ EY +L L H + + + + A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLA 234
I++ + Y + L H DL A +L E D FGL SRD Y + +
Sbjct: 159 ISQGMQYLAE--MKLVHRDLAARNILVAEGRKMKISD-----FGL---SRD--VYEED-S 205
Query: 235 Y------------TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMI 277
Y E L + T +S ++SFG +L ++++ G + IPP +++
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
Query: 278 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
+ + + D N S E ++ L +C + EP +RP D+ L
Sbjct: 266 KTGHRMERPD-----NCSEE----MYRLMLQCWKQEPDKRPVFADISKDL 306
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 463
E + + + F+ K+++ A+ YSQ I++ + Y RSL +L + AL DA +
Sbjct: 7 EELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATR 65
Query: 464 AQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
A + + +Y +A + L + A + ++
Sbjct: 66 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 104
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 47/284 (16%), Positives = 90/284 (31%), Gaps = 55/284 (19%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYC------ 139
V +D + A+K+ H D ++ EA H N++
Sbjct: 45 VDLVE--GLHDGHFY-ALKRILCHEQQDREEAQREADMHRLFNHP---NILRLVAYCLRE 98
Query: 140 -CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR------LRVALYIAEALDYCSSEG 192
E L+ + TL + + + L + L I L+ +
Sbjct: 99 RGAKHEAWLLLPFFKRGTLWNEI----ERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152
Query: 193 RPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSR-------------DGKSYSTNLAYTPP 238
+ H DL +L + G P L G M + D + ++Y P
Sbjct: 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
Query: 239 EYL---RNGRVTPESVIFSFGTVLLDLLSGKH-----IPPSHALDMIRGKNILHLMDSHL 290
E + + + ++S G VL ++ G+ ++ + +
Sbjct: 213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPR- 271
Query: 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334
SS ++ L + + +P +RP+ L+S L LQ
Sbjct: 272 ---HSSA----LWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 53/289 (18%), Positives = 97/289 (33%), Gaps = 70/289 (24%)
Query: 86 VYKGRLQD--GNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-----RHKRLANLIG 137
V + D +AVK A + + E K+ +H+ + NL+G
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL----KIMSHLGQHENIVNLLG 117
Query: 138 YCCDGDERLLVAEYMPN------------DTLAKHLFHWENQTIEWAMRLRVALYIAEAL 185
C G L++ EY F N T L + +A+ +
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGM 177
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLAY---- 235
+ +S + H D+ A VL GD FGL +RD + + Y
Sbjct: 178 AFLAS--KNCIHRDVAARNVLLTNGHVAKIGD-----FGL---ARD--IMNDS-NYIVKG 224
Query: 236 --------TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP----PSHA--LDMIRGKN 281
PE + + T +S ++S+G +L ++ S P ++ +++
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 284
Query: 282 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330
+ F+ + ++ + C EP RP + + S L
Sbjct: 285 QMAQPA------FAPKN---IYSIMQACWALEPTHRPTFQQICSFLQEQ 324
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 40/223 (17%), Positives = 69/223 (30%), Gaps = 46/223 (20%)
Query: 138 YCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
C G + E++ L + L++ A+ + + P+ H
Sbjct: 114 ELCKGQ----LVEFLKKMESRGPL--SCDTV------LKIFYQTCRAVQHMHRQKPPIIH 161
Query: 198 -DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN----------------LAYTPPE- 239
DL +L G +L FG YS + Y PE
Sbjct: 162 RDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEI 221
Query: 240 --YLRNGRVTPESVIFSFGTVLLDLLSGKHIPP---SHALDMIRGKNILHLMDSHLEGNF 294
N + + I++ G +L L +H P L ++ GK + D+
Sbjct: 222 IDLYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDGAKLRIVNGKYSIPPHDT-----Q 274
Query: 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVP 337
+ L LQ P ER + ++V L + +V
Sbjct: 275 YTV----FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 29/161 (18%)
Query: 176 RVALYIAE---ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK--------NSR 224
+V Y+ + AL + S+G ++ D+ + G +L FGL+ +
Sbjct: 158 QVWGYLRDTLLALAHLHSQGL-VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ 216
Query: 225 DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM--IRGKNI 282
+G Y PE L+ + +FS G +L++ P +R +
Sbjct: 217 EGDPR-----YMAPELLQGSY-GTAADVFSLGLTILEVACNME-LPHGGEGWQQLRQGYL 269
Query: 283 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
+ L S E + L+ +P+ R + L
Sbjct: 270 PPEFTAGL-----SSELR---SVLVMMLEPDPKLRATAEAL 302
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 55/283 (19%), Positives = 103/283 (36%), Gaps = 43/283 (15%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD---EAWGVGKLRHKRLANLIGY---C 139
VY+ D A+KK D K AD E + +L H N+I Y
Sbjct: 48 VYRAA--CLLDGVPV-ALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASF 101
Query: 140 CDGDERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ +E +V E L++ + F + + I + + + AL++ S + H
Sbjct: 102 IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMH 159
Query: 198 -DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVI 252
D+ V G +L GL + + + +L TP PE + +S I
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDI 219
Query: 253 FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-------SEEATVVFDL 305
+S G +L ++ + + P + M N+ L + ++ SEE + L
Sbjct: 220 WSLGCLLYEMAALQ--SPFYGDKM----NLYSLCKKIEQCDYPPLPSDHYSEE---LRQL 270
Query: 306 ASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHE 348
+ C+ +P +RP+ + + + + H
Sbjct: 271 VNMCINPDPEKRPDVTYV------YDVAKRMHACTASSLEHHH 307
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 3e-09
Identities = 43/198 (21%), Positives = 71/198 (35%), Gaps = 39/198 (19%)
Query: 150 EYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGRPLYH-DL---NAYRV 204
+ + L + + E + L + + IAEA+++ S+G L H DL N +
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG--LMHRDLKPSN---I 195
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA----------------YTPPEYLRNGRVTP 248
F + ++ FGL+ + T L Y PE + +
Sbjct: 196 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSH 255
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF---SSEEATVVFDL 305
+ IFS G +L +LL S M R + I + + F +E +V
Sbjct: 256 KVDIFSLGLILFELL----YSFSTQ--MERVRIITDVRNLKFPLLFTQKYPQEHMMV--- 306
Query: 306 ASRCLQYEPRERPNTKDL 323
L P ERP D+
Sbjct: 307 -QDMLSPSPTERPEATDI 323
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 3e-09
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 35/210 (16%)
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALYIAE 183
LRH + L GY D L+ EY P T+ + L + R A YI E
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--------LSKFDEQRTATYITE 117
Query: 184 ---ALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NLAYTP 237
AL YC S+ + H D+ +L G+ +++ FG ++ + L Y P
Sbjct: 118 LANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295
PE + + ++S G + + L GK PP A F+
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEFTFP 227
Query: 296 ---SEEATVVFDLASRCLQYEPRERPNTKD 322
+E A DL SR L++ P +RP ++
Sbjct: 228 DFVTEGAR---DLISRLLKHNPSQRPMLRE 254
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-09
Identities = 66/298 (22%), Positives = 103/298 (34%), Gaps = 70/298 (23%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V++ R + AVK + A F EA + + + + L+G C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 143 DERLLVAEYMPNDTLAKHL----------------------FHWENQTIEWAMRLRVALY 180
L+ EYM L + L + A +L +A
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLA 234
+A + Y S R H DL L EN D FGL SR+ YS +
Sbjct: 183 VAAGMAYLSE--RKFVHRDLATRNCLVGENMVVKIAD-----FGL---SRN--IYSAD-Y 229
Query: 235 Y------------TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMI 277
Y PPE + R T ES ++++G VL ++ S G + + +
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 289
Query: 278 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 335
R NIL + N E +++L C P +RP+ + L + R +
Sbjct: 290 RDGNILACPE-----NCPLE----LYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 4e-09
Identities = 57/288 (19%), Positives = 105/288 (36%), Gaps = 55/288 (19%)
Query: 86 VYKGRL----QDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYC 139
V +D + +AVK A D E + + +HK + NL+G C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 140 CDGDERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEAL 185
++ EY L ++L H + + + A +A +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY--------- 235
+Y +S + H DL A VL E+ +++ FGL +RD + + Y
Sbjct: 205 EYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGL---ARD--IHHID-YYKKTTNGRLP 256
Query: 236 ---TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNILHLMD 287
PE L + T +S ++SFG +L ++ + G +P +++ + +
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 316
Query: 288 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 335
N ++E ++ + C P +RP K LV L +
Sbjct: 317 -----NCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 4e-09
Identities = 56/288 (19%), Positives = 102/288 (35%), Gaps = 65/288 (22%)
Query: 86 VYKGRLQDGNDNRRW----IAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYC 139
V + ++ +AVK A D E + + +HK + NL+G C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 140 CDGDERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEAL 185
++ EY L ++L + + + + +A +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLAY---- 235
+Y +S + H DL A VL EN D FGL +RD + + Y
Sbjct: 217 EYLAS--QKCIHRDLAARNVLVTENNVMKIAD-----FGL---ARD--INNID-YYKKTT 263
Query: 236 --------TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKH----IPPSHALDMIRGKNI 282
PE L + T +S ++SFG ++ ++ + G IP +++ +
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 323
Query: 283 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330
+ N ++E ++ + C P +RP K LV L +
Sbjct: 324 MDKPA-----NCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 8e-09
Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 24/146 (16%)
Query: 381 HYKDDEGTNELSFQEWTQQMRDM---------LEARKRGDVAFREKEFKTAVDCYSQFID 431
H+ G L FQ + + D + ++ G+ F++ E A+ Y + +D
Sbjct: 7 HHHHSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALD 66
Query: 432 VGTMVSP---------------TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476
+ + C+ A+ A + + + A Y
Sbjct: 67 FFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALY 126
Query: 477 MQAVALAKLDMHKDAADMLKEAASLE 502
VA ++A + L +AASL
Sbjct: 127 KLGVANMYFGFLEEAKENLYKAASLN 152
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 9e-09
Identities = 43/205 (20%), Positives = 75/205 (36%), Gaps = 35/205 (17%)
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALYIAE 183
LRH + + Y D L+ E+ P L K L R R A ++ E
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK--------HGRFDEQRSATFMEE 122
Query: 184 ---ALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NLAYTP 237
AL YC + H D+ +L G+ +++ FG ++ + + L Y P
Sbjct: 123 LADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLP 180
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295
PE + + ++ G + + L G PP + + + +
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGM--PPFDS------PSHTETHRRIVNVDLKFP 232
Query: 296 ---SEEATVVFDLASRCLQYEPRER 317
S+ + DL S+ L+Y P +R
Sbjct: 233 PFLSDGSK---DLISKLLRYHPPQR 254
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 52/274 (18%), Positives = 98/274 (35%), Gaps = 51/274 (18%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFA-DEAWGVGKLRHKRLANLIGY--CCD 141
VV++ + + D+ + A+K+ ++ E + KL H ++ Y
Sbjct: 20 VVFEAK--NKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHP---GIVRYFNAWL 73
Query: 142 GDERL-------------LVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDY 187
+ + + L + E ++ L + L IAEA+++
Sbjct: 74 EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEF 133
Query: 188 CSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTNLA--------- 234
S+G L H DL + F + ++ FGL M + ++ T +
Sbjct: 134 LHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 235 ----YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-KNILHLMDSH 289
Y PE + + + IFS G +L +LL P S ++ +R ++ +L
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVRTLTDVRNLKFPP 247
Query: 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
L E +V L P ERP ++
Sbjct: 248 LFTQKYPCEYVMV----QDMLSPSPMERPEAINI 277
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 1e-08
Identities = 15/105 (14%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALR 459
M + +++G+ F++ ++ AV CY Q I +P Y+ +++ + + A++
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 460 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504
Q + L++ + A ++ ++
Sbjct: 60 MCQQGLRYTSTAEHVAIRSKLQYR-LELAQGAVGSVQIPVVEVDE 103
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 1e-08
Identities = 57/285 (20%), Positives = 98/285 (34%), Gaps = 58/285 (20%)
Query: 86 VYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCD 141
V + +D +AVK A + + E + L H + NL+G C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 142 GDERLLVAEYMPNDTLAKHL----------------FHWENQTIEWAMRLRVALYIAEAL 185
G L++ EY L L + ++ L + +A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY--------- 235
+ +S+ H DL A +L ++ FGL +RD + + Y
Sbjct: 159 AFLASKN--CIHRDLAARNILLTHGRITKICDFGL---ARD--IKNDS-NYVVKGNARLP 210
Query: 236 ---TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSHLE 291
PE + N T ES ++S+G L +L S P P M ++ E
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG----MPVDSKFYKMIK---E 263
Query: 292 GN------FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330
G + E ++D+ C +P +RP K +V +
Sbjct: 264 GFRMLSPEHAPAE---MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-08
Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 463
L+ ++ G+ A+++K+F TA+ Y + ++ + T ++ + + +
Sbjct: 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEK 63
Query: 464 A-------QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
A + Y + A+ + K + +KDA ++ +
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH 109
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 394 QEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ 453
Q + +M R + AF ++ A+ + ++V + R+ C + +
Sbjct: 134 QSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGE 192
Query: 454 PDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 501
P A+ D A + D + AFY + +L H+ + ++E L
Sbjct: 193 PRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKL 240
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 464
+ + G + A+ + +D + Y RR+ L + AAL D +
Sbjct: 28 KHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKV 86
Query: 465 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+ D++ A + L K +A D K+
Sbjct: 87 IQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN 124
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 1e-08
Identities = 34/263 (12%), Positives = 68/263 (25%), Gaps = 37/263 (14%)
Query: 85 VVYKGRLQDGND--NRRWIAVKKFTKHAWPDPKQF---ADEAWGVGKLRHKRLANLIGYC 139
VY+ D ND N++ +K +P +F +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEG---- 192
+ +LV E TL + ++N + + V + ++
Sbjct: 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG 196
Query: 193 --RP----LYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN---LAYTPPEY 240
+P L + D + L G MK G ++ + E
Sbjct: 197 DIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM 256
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300
L N + F + +L G ++ + + + + +
Sbjct: 257 LSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFR-------RLPHLDMWN 309
Query: 301 VVFDLASRCLQYEPRERPNTKDL 323
F L + DL
Sbjct: 310 EFFH---VMLNIPDCHHLPSLDL 329
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 59/298 (19%), Positives = 103/298 (34%), Gaps = 59/298 (19%)
Query: 86 VYKGRLQD--GNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYCCD 141
V +AVK + A + + E + +L H+ + NL+G C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 142 GDERLLVAEYMPNDTLAKHL-----------FHWENQTIEWAMR----------LRVALY 180
L+ EY L +L +ENQ L A
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY---- 235
+A+ +++ + H DL A VL ++ FGL +RD S + Y
Sbjct: 181 VAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGL---ARD--IMSDS-NYVVRG 232
Query: 236 --------TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHALDMIRGKNILHLM 286
PE L G T +S ++S+G +L ++ S P P + N L+
Sbjct: 233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG----IPVDANFYKLI 288
Query: 287 DS--HLE--GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYV 340
+ ++ + E ++ + C ++ R+RP+ +L S L + Y
Sbjct: 289 QNGFKMDQPFYATEE----IYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMYQ 342
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 60/278 (21%), Positives = 86/278 (30%), Gaps = 56/278 (20%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWG-VGKLR----HKRLANLIGYC 139
VV++G Q R +AVK+ F D A + L H +
Sbjct: 31 VVFQGSFQG-----RPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRYYCSE 78
Query: 140 CDGDERLLVAEYMP---NDTLAKHLFHWENQTIEWAMRLRVALY-IAEALDYCSSEG--- 192
+ E D + EN ++ L IA + + S
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIH 138
Query: 193 RPL---------YHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA--------Y 235
R L A + EN +S FGL K G+S +
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGW 198
Query: 236 TPPEYLRNG-------RVTPESVIFSFGTVLLDLLSGKHIPPSHALD----MIRGKNILH 284
PE L R+T IFS G V +LS P +IRG L
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 258
Query: 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 322
M + + EAT DL S+ + ++P +RP
Sbjct: 259 EMKCLHDRSLI-AEAT---DLISQMIDHDPLKRPTAMK 292
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 3e-08
Identities = 55/280 (19%), Positives = 100/280 (35%), Gaps = 42/280 (15%)
Query: 85 VVYKGRLQDGNDNR--RWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYC 139
VY D +A+K K+F E +L H+ + ++I
Sbjct: 26 TVYLAE-----DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD 80
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
+ D LV EY+ TL++++ + + + I + + + + H D
Sbjct: 81 EEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRD 136
Query: 199 LNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL-----AYTPPEYLRNGRVTPESVIF 253
+ +L D N ++ FG+ K + TN Y PE + + I+
Sbjct: 137 IKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY 196
Query: 254 SFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS------ 307
S G VL ++L G+ PP G+ + + H++ + + V D+
Sbjct: 197 SIGIVLYEMLVGE--PP------FNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI 248
Query: 308 -RCLQYEPRERPNT-----KDLVSTLAPLQNRPDVPSYVM 341
R + + R T DL S L NR + Y +
Sbjct: 249 LRATEKDKANRYKTIQEMKDDLSSVLHE--NRANEDVYEL 286
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 23/153 (15%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYT 236
I A+ YC + + H DL A +L D + + +++ FG G Y
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 237 PPEYLRNGRVT-PESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295
PE + + PE ++S G +L L+SG +P G+N+ L + L G +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKYR 232
Query: 296 -----SEEATVVFDLASRCLQYEPRERPNTKDL 323
S + +L R L P +R + +
Sbjct: 233 IPFYMSTDCE---NLLKRFLVLNPIKRGTLEQI 262
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 6e-08
Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 30/210 (14%)
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAE 183
L+H + L Y D + LV E N + ++L + E + I
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN----EARHFMHQIIT 123
Query: 184 ALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL-MKNSRDGKSYSTN---LAYTPP 238
+ Y S G + H DL +L N + +++ FGL + + + T Y P
Sbjct: 124 GMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISP 181
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS--- 295
E ES ++S G + LL G+ PP + + ++ + ++
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGR--PPFDT------DTVKNTLNKVVLADYEMPS 233
Query: 296 --SEEATVVFDLASRCLQYEPRERPNTKDL 323
S EA DL + L+ P +R + +
Sbjct: 234 FLSIEAK---DLIHQLLRRNPADRLSLSSV 260
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 7e-08
Identities = 55/284 (19%), Positives = 101/284 (35%), Gaps = 57/284 (20%)
Query: 86 VYKGRLQ--DGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYCCD 141
V + D R +AVK + A + + E + + H + NL+G C
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 142 GDE-RLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEALD 186
+++ E+ L+ +L + + + +A+ ++
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 187 YCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY---------- 235
+ +S R H DL A +L E ++ FGL +RD Y Y
Sbjct: 163 FLAS--RKCIHRDLAARNILLSEKNVVKICDFGL---ARD--IYKDP-DYVRKGDARLPL 214
Query: 236 --TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHALDMIRGKNILHLMDSHLEG 292
PE + + T +S ++SFG +L ++ S P P + + + EG
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG----VKIDEEFCRRLK---EG 267
Query: 293 N------FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330
+++ E ++ C EP +RP +LV L L
Sbjct: 268 TRMRAPDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 9e-08
Identities = 47/232 (20%), Positives = 79/232 (34%), Gaps = 46/232 (19%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALYIA 182
++++ G + DE ++ EYM ND++ K ++ + + + I
Sbjct: 99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158
Query: 183 E---ALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NL 233
+ Y +E + + H D+ N +L D+NG +LS FG + D K +
Sbjct: 159 SVLNSFSYIHNE-KNICHRDVKPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTY 214
Query: 234 AYTPPEYLRNGRVT--PESVIFSFGTVLLDLLSGK---------------------HIPP 270
+ PPE+ N + I+S G L + P
Sbjct: 215 EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPL 274
Query: 271 SHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 322
D L S NF S E D L+ P ER ++D
Sbjct: 275 ----DRNHFLYPLTNKKSTCSNNFLSNEDI---DFLKLFLRKNPAERITSED 319
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 408 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSP--TVYARRSLCHLMCDQPDAALRDAMQAQ 465
+G+ FR K++ A+ Y+ +++ Y+ S C++ + + +A
Sbjct: 11 DKGNQFFRNKKYDDAIKYYNWALEL----KEDPVFYSNLSACYVSVGDLKKVVEMSTKAL 66
Query: 466 CVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 503
+ PD+S +A A L DA L + +
Sbjct: 67 ELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGD 104
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 12/97 (12%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 408 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 467
+ + + + + + + + + +VY R + + D A +D +A+ +
Sbjct: 275 YMALIMADRNDSTEYYNYFDKALKLDSN-NSSVYYHRGQMNFILQNYDQAGKDFDKAKEL 333
Query: 468 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504
P+ + A + + D + EA +
Sbjct: 334 DPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPE 370
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Query: 409 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 468
G F + + A + + I++ Y +L + +A +
Sbjct: 243 TGIFKFLKNDPLGAHEDIKKAIELFP--RVNSYIYMALIMADRNDSTEYYNYFDKALKLD 300
Query: 469 PDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 501
+ S+ +Y + L + A +A L
Sbjct: 301 SNNSSVYYHRGQMNFILQNYDQAGKDFDKAKEL 333
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 1e-07
Identities = 20/136 (14%), Positives = 53/136 (38%), Gaps = 17/136 (12%)
Query: 381 HYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQ---FIDVGTMVS 437
++ + + E++ +E ++ ++RG V F+E ++K A+ Y + +++ + S
Sbjct: 128 SFEKAKESWEMNSEE---KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS 184
Query: 438 P-----------TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLD 486
+ ++CHL AA+ +A + + + A ++
Sbjct: 185 NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVN 244
Query: 487 MHKDAADMLKEAASLE 502
+ A ++ L
Sbjct: 245 DFELARADFQKVLQLY 260
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-07
Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP-----------------TVYARRSLC 447
R++G+ F +K++K A+D Y + + +YA S C
Sbjct: 13 ALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQC 72
Query: 448 HLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+L A + + A + +A A +A + LK
Sbjct: 73 YLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 56/276 (20%), Positives = 102/276 (36%), Gaps = 43/276 (15%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGY 138
GE + +V R + R +AVK + +E + +H + +
Sbjct: 54 GEGSTGIVCLAR---EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 139 CCDGDERLLVAEYMP----NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
G+E ++ E++ D +++ + E Q A L +AL Y ++G
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLN-EEQI---ATVCEAVL---QALAYLHAQGV- 162
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPES 250
++ D+ + +L +G +LS FG +L TP PE + E
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEV 222
Query: 251 VIFSFGTVLLDLLSGK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DL 305
I+S G ++++++ G+ P A+ +R L +SH S D
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSH---KVSPV-----LRDF 274
Query: 306 ASRCLQYEPRERPNTKDL-----------VSTLAPL 330
R L +P+ER ++L L PL
Sbjct: 275 LERMLVRDPQERATAQELLDHPFLLQTGLPECLVPL 310
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-07
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 11/117 (9%)
Query: 397 TQQMRDMLEARK-RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPD 455
+ M D A K G+ A+++K+F+ A Y + I++ + T Y ++ + +
Sbjct: 1 SNAMTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFA 59
Query: 456 AALRDAMQA-------QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505
++ +A + Y + A A K + A + L E R
Sbjct: 60 ECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRS--LSEFR 114
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 1e-07
Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 43/276 (15%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGY 138
G+ A VY + +A+++ P + +E + + ++ + N +
Sbjct: 29 GQGASGTVYTAM---DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 139 CCDGDERLLVAEYMP----NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
GDE +V EY+ D + + E Q I A R L +AL++ S
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMD-EGQ-I--AAVCRECL---QALEFLHSNQV- 137
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPES 250
++ D+ + +L +G +L+ FG +S + + TP PE + P+
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 251 VIFSFGTVLLDLLSGK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DL 305
I+S G + ++++ G+ + P AL +I L + S+ F D
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE---KLSAI-----FRDF 249
Query: 306 ASRCLQYEPRERPNTKDL-----------VSTLAPL 330
+RCL+ + +R + K+L +S+L PL
Sbjct: 250 LNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 42/269 (15%), Positives = 78/269 (28%), Gaps = 47/269 (17%)
Query: 85 VVYKGR-LQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKL-RHKRLANLIGY-- 138
V+K DG A+K+ K + E + L +H +++ Y
Sbjct: 26 SVFKCVKRLDG----CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS---HVVRYFS 78
Query: 139 -CCDGDERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPL 195
+ D L+ EY +LA + + + A + L + L Y S L
Sbjct: 79 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--L 136
Query: 196 YH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-------------------Y 235
H D+ + P + ++ + +
Sbjct: 137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 196
Query: 236 TPPEYLR-NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF 294
E L+ N P++ IF+ ++ + P D I +
Sbjct: 197 LANEVLQENYTHLPKADIFALALTVVCAAGAE--PLPRNGDQW--HEIRQGRLPRIPQVL 252
Query: 295 SSEEATVVFDLASRCLQYEPRERPNTKDL 323
S E +L + +P RP+ L
Sbjct: 253 SQE----FTELLKVMIHPDPERRPSAMAL 277
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 31/188 (16%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFD-ENGDPRLSCFGLMKNSRDGKSYST---NLAY 235
+ A+ +C S G + H D+ +L D G +L FG D Y+ Y
Sbjct: 148 VVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-YTDFDGTRVY 204
Query: 236 TPPEYLRNGRVT-PESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF 294
+PPE++ + + ++S G +L D++ G IP +++ + LH +H+
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCG-DIPFERDQEILEAE--LH-FPAHV---- 256
Query: 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP--LQNRPDVPSYVMLGIPRHEEAPP 352
S + L RCL +P RP+ ++++ P DVP + + P
Sbjct: 257 -SPDCC---ALIRRCLAPKPSSRPSLEEILLD--PWMQTPAEDVP------LNPSKGGPA 304
Query: 353 TPQHPLSP 360
L P
Sbjct: 305 PLAWSLLP 312
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 35/257 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
+VY GR N+ IA+K+ + + +E L+HK + +G +
Sbjct: 37 IVYAGR---DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF 93
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAEALDYCSSEGRPLYH-DLN 200
+ E +P +L+ L + ++ + + Y I E L Y + H D+
Sbjct: 94 IKIFMEQVPGGSLSA-LLRSKWGPLKDNEQT-IGFYTKQILEGLKYLHDNQ--IVHRDIK 149
Query: 201 AYRVLFD-ENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRV--TPESVIF 253
VL + +G ++S FG K + T PE + G + I+
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 209
Query: 254 SFGTVLLDLLSGKHIPPSHALD-------MIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306
S G ++++ +GK PP + L + + + + S EA
Sbjct: 210 SLGCTIIEMATGK--PPFYELGEPQAAMFKVGMFKVHPEIPESM-----SAEAK---AFI 259
Query: 307 SRCLQYEPRERPNTKDL 323
+C + +P +R DL
Sbjct: 260 LKCFEPDPDKRACANDL 276
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAAL 458
+ +M R + AF ++ A+ + ++V + R+ C + +P A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 459 RDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 501
D A + D + AFY + +L H+ + ++E L
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKL 217
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 44/216 (20%), Positives = 72/216 (33%), Gaps = 37/216 (17%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALY-- 180
L H+ + G+ D D +V E +L + L Y
Sbjct: 97 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--------RKALTEPEARYYLR 148
Query: 181 -IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL-MKNSRDGKSYST---NLA 234
I Y + H DL + +E+ + ++ FGL K DG+
Sbjct: 149 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 206
Query: 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF 294
Y PE L + E ++S G ++ LL GK PP + + +
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFET------SCLKETYLRIKKNEY 258
Query: 295 S-----SEEATVVFDLASRCLQYEPRERPNTKDLVS 325
S + A L + LQ +P RP +L++
Sbjct: 259 SIPKHINPVAA---SLIQKMLQTDPTARPTINELLN 291
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 5e-07
Identities = 44/216 (20%), Positives = 72/216 (33%), Gaps = 37/216 (17%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALY-- 180
L H+ + G+ D D +V E +L + L Y
Sbjct: 71 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--------RKALTEPEARYYLR 122
Query: 181 -IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL-MKNSRDGKSYSTN---LA 234
I Y + H DL + +E+ + ++ FGL K DG+
Sbjct: 123 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 180
Query: 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF 294
Y PE L + E ++S G ++ LL GK PP + + +
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFET------SCLKETYLRIKKNEY 232
Query: 295 S-----SEEATVVFDLASRCLQYEPRERPNTKDLVS 325
S + A L + LQ +P RP +L++
Sbjct: 233 SIPKHINPVAA---SLIQKMLQTDPTARPTINELLN 265
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 6e-07
Identities = 57/335 (17%), Positives = 115/335 (34%), Gaps = 49/335 (14%)
Query: 21 HHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFS-----SDFIV 75
HHH + + S E + D +++ N + +
Sbjct: 1 HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSI 60
Query: 76 SES-GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRL 132
+ G + V++ N+ ++ A+K + + +E + KL+
Sbjct: 61 LKQIGSGGSSKVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 133 A--NLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAEALDY 187
L Y +V E D L L ++ Y + EA+
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKS-----YWKNMLEAVHT 170
Query: 188 CSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN---LAYTPPEY 240
G + H DL L +G +L FG+ M+ + + Y PPE
Sbjct: 171 IHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 241 LRN-----------GRVTPESVIFSFGTVLLDLLSGKHIPP-SHALDMIRGKNILHLMDS 288
+++ +++P+S ++S G +L + GK P ++ I + ++D
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDP 283
Query: 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
+ E F + D+ CL+ +P++R + +L
Sbjct: 284 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 318
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 6e-07
Identities = 44/259 (16%), Positives = 78/259 (30%), Gaps = 46/259 (17%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V++ + AVKK +E L R+ L G +G
Sbjct: 74 VHRMK---DKQTGFQCAVKKV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 125
Query: 146 LLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALY---IAEALDYCSSEGRPLYHD 198
+ E + +L + + E++ Y E L+Y + L+ D
Sbjct: 126 NIFMELLEGGSLGQLIKQMGCLPEDR---------ALYYLGQALEGLEYLHTRRI-LHGD 175
Query: 199 LNAYRVLFDENGDP-RLSCFGLMKNSRDGKSYSTNLAY-----TP----PEYLRNGRVTP 248
+ A VL +G L FG + + L T PE +
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 235
Query: 249 ESVIFSFGTVLLDLLSGKH----IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304
+ I+S ++L +L+G H I + + + + A
Sbjct: 236 KVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR---EIPPSCAPLTA----Q 288
Query: 305 LASRCLQYEPRERPNTKDL 323
L+ EP R + +L
Sbjct: 289 AIQEGLRKEPVHRASAMEL 307
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 30/159 (18%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ + Y + H DL +L ++ + R+ FGL + K +
Sbjct: 135 VLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 192
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
Y PE L G + ++S G +L LLSG PP + G N ++ +G
Sbjct: 193 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILKKVEKGK 243
Query: 294 FS---------SEEATVVFDLASRCLQYEPRERPNTKDL 323
++ SE A DL + L Y P R + +D
Sbjct: 244 YTFELPQWKKVSESAK---DLIRKMLTYVPSMRISARDA 279
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 33/158 (20%), Positives = 61/158 (38%), Gaps = 30/158 (18%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ + Y + H DL +L +++ ++ FGL + K L
Sbjct: 145 VLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTA 202
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
Y PE LR + + ++S G +L LL+G PP G+ ++ +G
Sbjct: 203 YYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILRKVEKGK 253
Query: 294 FS---------SEEATVVFDLASRCLQYEPRERPNTKD 322
++ SE A DL + LQ++ + R + +
Sbjct: 254 YTFDSPEWKNVSEGA---KDLIKQMLQFDSQRRISAQQ 288
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 40/160 (25%)
Query: 181 IAEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
+ E + + H DL N +L D++ + +L+ FG G+ + T
Sbjct: 133 LLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGT 186
Query: 237 P----PEYLRNGRV------TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM 286
P PE + E ++S G ++ LL+G PP + + ++
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRKQMLML 238
Query: 287 DSHLEGNFS---------SEEATVVFDLASRCLQYEPRER 317
+ GN+ S+ DL SR L +P++R
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVK---DLVSRFLVVQPQKR 275
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 21/151 (13%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDEN-GDPRLSCFGLMKNSRDGKSYST---NLAY 235
+ EA+ +C + G + H D+ +L D N G+ +L FG +D Y+ Y
Sbjct: 158 VLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRVY 214
Query: 236 TPPEYLRNGRVT-PESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF 294
+PPE++R R + ++S G +L D++ G IP H ++IRG+ +
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHDEEIIRGQ---VFFRQRV---- 266
Query: 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVS 325
S E L CL P +RP +++ +
Sbjct: 267 -SSECQ---HLIRWCLALRPSDRPTFEEIQN 293
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 40/196 (20%), Positives = 68/196 (34%), Gaps = 22/196 (11%)
Query: 86 VYKGRLQDGNDNR--RWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCC 140
VY+ D R +A+K ++ DP + EA G+L+ + + +
Sbjct: 50 VYEAE-----DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE 104
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DL 199
+ + + LA L + + + I ALD + G H D+
Sbjct: 105 IDGQLYVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDV 160
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPESVIFS 254
+L + L FG+ + D K L Y PE T + I++
Sbjct: 161 KPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYA 220
Query: 255 FGTVLLDLLSGKHIPP 270
VL + L+G PP
Sbjct: 221 LTCVLYECLTGS--PP 234
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 4e-06
Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 29/157 (18%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ AL Y S+ + H DL +LF + ++ FGL + + + +
Sbjct: 133 MMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTA 190
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
Y PE + VT + I+S G V+ LL+G P G ++ +
Sbjct: 191 LYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEVQQKATYKE 241
Query: 294 FS--------SEEATVVFDLASRCLQYEPRERPNTKD 322
+ + +A DL + L +P RP+
Sbjct: 242 PNYAVECRPLTPQAV---DLLKQMLTKDPERRPSAAQ 275
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 4e-06
Identities = 20/150 (13%), Positives = 49/150 (32%), Gaps = 19/150 (12%)
Query: 369 DLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYS- 427
DL +++ K+ + ++++ +E + G+ F+E++ + A+ Y
Sbjct: 148 DLLYEVEVIGFDETKEGKARSDMTVEERIGAADRR---KMDGNSLFKEEKLEEAMQQYEM 204
Query: 428 --QFIDVGTMVSPT-------------VYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472
++ M + + C + + D A+
Sbjct: 205 AIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNP 264
Query: 473 TAFYMQAVALAKLDMHKDAADMLKEAASLE 502
A + + A A+L A D ++A
Sbjct: 265 KALFRRGKAKAELGQMDSARDDFRKAQKYA 294
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 5e-06
Identities = 55/322 (17%), Positives = 105/322 (32%), Gaps = 43/322 (13%)
Query: 22 HHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFSSDFIVSES-GE 80
+H +H ++ +G + ++ + + + + E G
Sbjct: 2 RGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 81 KAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC 140
A VV++ + K D +E + +L H +L NL
Sbjct: 62 GAFGVVHRCVEKATGRVF---VAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 141 DGDERLLVAEYMP-----NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPL 195
D E +L+ E++ + A+ E + I + MR E L + +
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY-MRQ-----ACEGLKHMHEHS--I 170
Query: 196 YH-DLNAYRVLFDENGDPRLSC--FGLMKNSRDGKSYSTNLA---YTPPEYLRNGRVTPE 249
H D+ ++ + + FGL + A + PE + V
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 230
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS---------SEEAT 300
+ +++ G + LLSG + P G++ L + + ++ S EA
Sbjct: 231 TDMWAIGVLGYVLLSG--LSP------FAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 282
Query: 301 VVFDLASRCLQYEPRERPNTKD 322
D LQ EPR+R D
Sbjct: 283 ---DFIKNLLQKEPRKRLTVHD 301
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 49/265 (18%), Positives = 99/265 (37%), Gaps = 43/265 (16%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHK--RLANLIGYCC 140
V++ N+ ++ A+K + + +E + KL+ ++ L Y
Sbjct: 43 KVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAEALDYCSSEGRPLYH 197
+V E D L L ++ Y + EA+ G + H
Sbjct: 99 TDQYIYMVMECGNID-LNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHG--IVH 150
Query: 198 -DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN---LAYTPPEYLRN------- 243
DL L +G +L FG+ M+ + + Y PPE +++
Sbjct: 151 SDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 244 ----GRVTPESVIFSFGTVLLDLLSGKHIPP-SHALDMIRGKNILHLMDSHLEGNFSSEE 298
+++P+S ++S G +L + GK P ++ I + ++D + E F
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIP 265
Query: 299 ATVVFDLASRCLQYEPRERPNTKDL 323
+ D+ CL+ +P++R + +L
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISIPEL 290
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 7e-06
Identities = 54/294 (18%), Positives = 94/294 (31%), Gaps = 45/294 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
+Y D N N R + +K D E + ++ H + + +
Sbjct: 95 WIYLAL--DRNVNGRPVVLK--GLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEH 150
Query: 142 GDERL-----LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
D +V EY+ +L + Q + A + L I AL Y S G +Y
Sbjct: 151 TDRHGDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLHSIGL-VY 205
Query: 197 HDL---NAYRVLFDENGDPRLSCFGLMKN-SRDGKSYSTNLAYTPPEYLRNGRVTPESVI 252
+DL N ++ E +L G + + G Y T + PE +R T + I
Sbjct: 206 NDLKPEN---IMLTEEQ-LKLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDI 259
Query: 253 FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
++ G L L P G+ + L + ++ R +
Sbjct: 260 YTVGRTLAALTLDL--PTR------NGRYVDGLPEDDPVLKTYDSYGRLL----RRAIDP 307
Query: 313 EPRERPNT-----KDLVSTLAPLQ-NRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360
+PR+R T L L + VP + I + ++
Sbjct: 308 DPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTIFSPSRSTFGVDLLVAH 361
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 7e-06
Identities = 39/158 (24%), Positives = 56/158 (35%), Gaps = 30/158 (18%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ A+ YC + H DL LF + +L FGL + GK T +
Sbjct: 115 VLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP 172
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
Y P+ L G PE +S G ++ LL G PP +M EG
Sbjct: 173 YYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PPFS------APTDSEVMLKIREGT 223
Query: 294 FS---------SEEATVVFDLASRCLQYEPRERPNTKD 322
F+ S +A L R L P++R +
Sbjct: 224 FTFPEKDWLNVSPQAE---SLIRRLLTKSPKQRITSLQ 258
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 8e-06
Identities = 40/284 (14%), Positives = 84/284 (29%), Gaps = 60/284 (21%)
Query: 85 VVYKGRLQDGNDNR--RWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYC 139
++ D R +A+ + ++ +A ++
Sbjct: 46 QFWQAL-----DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV 100
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
L+VAE++ +L + + + +R +A A D G +
Sbjct: 101 HTRAGGLVVAEWIRGGSLQEVA----DTSPSPVGAIRAMQSLAAAADAAHRAG--VALSI 154
Query: 199 LNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTV 258
+ RV +GD L+ M P+ I G
Sbjct: 155 DHPSRVRVSIDGDVVLAYPATM-----------------------PDANPQDDIRGIGAS 191
Query: 259 LLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF---SSEEATV---VFDLASRCLQY 312
L LL + P L ++ L + G + + + + +A+R +Q
Sbjct: 192 LYALLVNR--WP---LPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQG 246
Query: 313 EPRERPNT--KDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTP 354
+ R + +L+ + +R +V +EAP +
Sbjct: 247 DGGIRSASTLLNLMQQATAVADRTEVL-------GPIDEAPVSA 283
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 9e-06
Identities = 38/219 (17%), Positives = 72/219 (32%), Gaps = 52/219 (23%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
++ H + L + + +L+ E + D LA+ E + ++ I
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS-FIK-----QI 124
Query: 182 AEALDYCSSEGRPLYHDLN-AYR------VLFDENGDP----RLSCFGLMKNSRDGKSYS 230
+ ++Y H A+ ++ + P +L FGL DG +
Sbjct: 125 LDGVNYL--------HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 231 TNLA---YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287
+ PE + + E+ ++S G + LLSG P G +
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASP------FLGDTKQETLA 228
Query: 288 SHLEGNFS---------SEEATVVFDLASRCLQYEPRER 317
+ ++ SE A D + L E R+R
Sbjct: 229 NITSVSYDFDEEFFSHTSELAK---DFIRKLLVKETRKR 264
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 42/219 (19%), Positives = 71/219 (32%), Gaps = 43/219 (19%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
LRH L NL D +E +++ E+M + +A MR +
Sbjct: 210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR-----QV 264
Query: 182 AEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSC--FGLMKNSRDGKSYSTNLA- 234
+ L + H DL N ++F L FGL + +S
Sbjct: 265 CKGLCHMHENN--YVHLDLKPEN---IMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 319
Query: 235 --YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292
+ PE V + ++S G + LLSG + P G+N + +
Sbjct: 320 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG--LSP------FGGENDDETLRNVKSC 371
Query: 293 NFS---------SEEATVVFDLASRCLQYEPRERPNTKD 322
+++ SE+ D + L +P R
Sbjct: 372 DWNMDDSAFSGISEDGK---DFIRKLLLADPNTRMTIHQ 407
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 23/192 (11%)
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGR 193
Y + + L LV M L H++H A R Y AE L+ E
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRER- 306
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYTPPEYLRNGRVTPES 250
+Y DL +L D++G R+S GL + +G++ + Y PE ++N R T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP 366
Query: 251 VIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-----SEEATVVFDL 305
++ G +L ++++G+ P + + E S +A L
Sbjct: 367 DWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEVERLVKEVPEEYSERFSPQAR---SL 419
Query: 306 ASRCLQYEPRER 317
S+ L +P ER
Sbjct: 420 CSQLLCKDPAER 431
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 40/160 (25%)
Query: 181 IAEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
+ EA+ + + + H DL N +L D+N RLS FG + G+ L T
Sbjct: 209 LLEAVSFLHANN--IVHRDLKPEN---ILLDDNMQIRLSDFGFSCHLEPGEKLRE-LCGT 262
Query: 237 P----PEYLRNGRV------TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM 286
P PE L+ E +++ G +L LL+G PP + + ++
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRRQILML 314
Query: 287 DSHLEGNFS---------SEEATVVFDLASRCLQYEPRER 317
+EG + S DL SR LQ +P R
Sbjct: 315 RMIMEGQYQFSSPEWDDRSSTVK---DLISRLLQVDPEAR 351
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 64/281 (22%), Positives = 113/281 (40%), Gaps = 36/281 (12%)
Query: 58 SLADLRAATNNFSSDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFT-KHAWPDPK 115
L ++ + F + + G+ + V+KG N ++ +A+K + A + +
Sbjct: 9 GLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIE 65
Query: 116 QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP----NDTLAKHLFHWENQTIEW 171
E + + + G + ++ EY+ D L E Q
Sbjct: 66 DIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD-ETQI--- 121
Query: 172 AMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST 231
A LR L + LDY SE + ++ D+ A VL E+G+ +L+ FG+ D +
Sbjct: 122 ATILREIL---KGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177
Query: 232 NLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287
TP PE ++ ++ I+S G ++L G+ PP L ++ +L L+
Sbjct: 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE--PPHSELHPMK---VLFLIP 232
Query: 288 SH----LEGNFSSEEATVVF-DLASRCLQYEPRERPNTKDL 323
+ LEGN+S + CL EP RP K+L
Sbjct: 233 KNNPPTLEGNYSKP-----LKEFVEACLNKEPSFRPTAKEL 268
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 26/167 (15%)
Query: 175 LRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN- 232
+ + +A+ +++ +S R H DL A +L E ++ FGL ++ Y
Sbjct: 196 ICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 253
Query: 233 -----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHALDMIRGKNILHLM 286
L + PE + + T +S ++SFG +L ++ S P P + + +
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVKIDEEFCRRL 309
Query: 287 DSHLEGN------FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327
EG +++ E ++ C EP +RP +LV L
Sbjct: 310 K---EGTRMRAPDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHL 350
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 45/193 (23%), Positives = 67/193 (34%), Gaps = 28/193 (14%)
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGR 193
Y ++L + + M L HL + + Y AE L++ +
Sbjct: 259 YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNRF- 312
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS---TNLAYTPPEYLRNGRVTPES 250
+Y DL +L DE+G R+S GL + K ++ T+ Y PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH-GYMAPEVLQKGVAYDSS 371
Query: 251 V-IFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN-----FSSEEATVVFD 304
FS G +L LL G P K+ + L S E
Sbjct: 372 ADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELR---S 423
Query: 305 LASRCLQYEPRER 317
L LQ + R
Sbjct: 424 LLEGLLQRDVNRR 436
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 150 EYMPN--DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207
E M D K+++ + I + ++ L +AL++ + ++ D+ +L D
Sbjct: 101 ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD 160
Query: 208 ENGDPRLSCFGL---MKNSRDGKSYSTNLAYTP----PEYLRNGRVTPE----SVIFSFG 256
+G+ +L FG+ + +S T A PE + S ++S G
Sbjct: 161 RSGNIKLCDFGISGQLVDSIAK----TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLG 216
Query: 257 TVLLDLLSGKH-IPPSH----ALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASRCL 310
L +L +G+ P + L + + L +S E FS F + + CL
Sbjct: 217 ITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE-EREFSPS-----FINFVNLCL 270
Query: 311 QYEPRERPNTKDLVST---LAPLQNRPDVPSYVMLGIPRHEEAPPTPQ 355
+ +RP K+L+ L + +V YV + + P +P
Sbjct: 271 TKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPM 318
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 30/158 (18%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ + Y + H DL +L +++ D ++ FGL + +
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
Y PE LR G + ++S G +L LLSG PP + GKN ++ G
Sbjct: 188 YYIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFY------GKNEYDILKRVETGK 238
Query: 294 FS---------SEEATVVFDLASRCLQYEPRERPNTKD 322
++ S++A DL + L + P R
Sbjct: 239 YAFDLPQWRTISDDAK---DLIRKMLTFHPSLRITATQ 273
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 15/128 (11%), Positives = 42/128 (32%), Gaps = 14/128 (10%)
Query: 389 NELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP---------- 438
E + +++ +++G V F+ ++ AV Y + + M
Sbjct: 254 KESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASE 313
Query: 439 ----TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADM 494
+ ++C+L + A+ +A + Y + A ++ + A
Sbjct: 314 SFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGD 373
Query: 495 LKEAASLE 502
++ +
Sbjct: 374 FEKVLEVN 381
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 52/219 (23%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
+++H + L + + +L+ E + D LA+ E + E ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE-FLK-----QI 123
Query: 182 AEALDYCSSEGRPLYHDLN-AYR------VLF----DENGDPRLSCFGLMKNSRDGKSYS 230
+ Y H L A+ ++ ++ FGL G +
Sbjct: 124 LNGVYYL--------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 231 TNLA---YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287
+ PE + + E+ ++S G + LLSG P G +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASP------FLGDTKQETLA 227
Query: 288 SHLEGNFS---------SEEATVVFDLASRCLQYEPRER 317
+ N+ S A D R L +P++R
Sbjct: 228 NVSAVNYEFEDEYFSNTSALAK---DFIRRLLVKDPKKR 263
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 58/316 (18%), Positives = 96/316 (30%), Gaps = 74/316 (23%)
Query: 86 VYKGRLQDGNDNR--RWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCC 140
V+ R D R R +AVK DP +F EA L H + +
Sbjct: 28 VHLAR-----DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 141 DGDERL----LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+V EY+ TL + + + V +AL++ G +
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG--II 138
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTP 248
H D+ ++ ++ FG+ + D + T Y PE R V
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 249 ESVIFSFGTVLLDLLSG--------------KHI-----PPSHALDMIRGKNILHLMDSH 289
S ++S G VL ++L+G +H+ PPS + + +
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL---------SAD 249
Query: 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNT-----KDLVSTLAPLQNRPDVPSYVMLGI 344
L+ + + L P R T DLV P+ P +
Sbjct: 250 LD------------AVVLKALAKNPENRYQTAAEMRADLVRVHNGE--PPEAPKVLT-DA 294
Query: 345 PRHEEAPPTPQHPLSP 360
R + P
Sbjct: 295 ERTSLLSSAAGNLSGP 310
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 41/264 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHK--RLANLIGYCC 140
V++ N+ ++ A+K + + +E + KL+ ++ L Y
Sbjct: 24 KVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 79
Query: 141 DGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH- 197
+V E D L W + ++I+ R + EA+ G + H
Sbjct: 80 TDQYIYMVMECGNID-----LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--IVHS 132
Query: 198 DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN---LAYTPPEYLRN-------- 243
DL L +G +L FG+ M+ + + Y PPE +++
Sbjct: 133 DLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 191
Query: 244 ---GRVTPESVIFSFGTVLLDLLSGKHIPP-SHALDMIRGKNILHLMDSHLEGNFSSEEA 299
+++P+S ++S G +L + GK P ++ I + ++D + E F
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIPE 247
Query: 300 TVVFDLASRCLQYEPRERPNTKDL 323
+ D+ CL+ +P++R + +L
Sbjct: 248 KDLQDVLKCCLKRDPKQRISIPEL 271
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 45/230 (19%), Positives = 79/230 (34%), Gaps = 43/230 (18%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYT 236
I A++YC + H DL +L D+N + +++ FGL DG T + Y
Sbjct: 117 IICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 174
Query: 237 PPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295
PE + PE ++S G VL +L G +P + I +L +
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVG-RLP-------FDDEFIPNLFKKVNSCVYV 226
Query: 296 -----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEA 350
S A L R + +P +R T+ ++ P + + +P +
Sbjct: 227 MPDFLSPGAQ---SLIRRMIVADPMQR-------ITIQEIRRDP----WFNVNLPDYLRP 272
Query: 351 PPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQM 400
Q S D + ++ + +D L E +
Sbjct: 273 MEEVQG---------SYADSRIVSKLGEAMGFSEDYIVEALRSDENNEVK 313
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 38/224 (16%), Positives = 74/224 (33%), Gaps = 52/224 (23%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
++ H + L + + +L+ E + D LA+ E + ++ I
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS-FIKQ-----I 124
Query: 182 AEALDYCSSEGRPLYHDLN-AYR------VLFDENGDP----RLSCFGLMKNSRDGKSYS 230
+ ++Y H A+ ++ + P +L FGL DG +
Sbjct: 125 LDGVNYL--------HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 231 TNLA---YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287
+ PE + + E+ ++S G + LLSG P G +
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASP------FLGDTKQETLA 228
Query: 288 SHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKD 322
+ ++ SE A D + L E R+R ++
Sbjct: 229 NITAVSYDFDEEFFSQTSELAK---DFIRKLLVKETRKRLTIQE 269
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 66/328 (20%), Positives = 112/328 (34%), Gaps = 54/328 (16%)
Query: 22 HHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLAD--LRAATNNFSSDFIVSES- 78
HH +H + + + + AP A + + S F V
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESEL 61
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGY 138
G A ++VY+ + ++ A+K K D K E + +L H + L
Sbjct: 62 GRGATSIVYRCKQ---KGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEI 116
Query: 139 CCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
E LV E + D + + ++ E + A++ I EA+ Y G
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD-AVK-----QILEAVAYLHENG-- 168
Query: 195 LYH-DL---NAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRN 243
+ H DL N +L+ + +++ FGL K T + TP PE LR
Sbjct: 169 IVHRDLKPEN---LLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAPEILRG 224
Query: 244 GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-------- 295
PE ++S G + LL G P + + + L +
Sbjct: 225 CAYGPEVDMWSVGIITYILLCG--FEPFYDERGDQF-----MFRRILNCEYYFISPWWDE 277
Query: 296 -SEEATVVFDLASRCLQYEPRERPNTKD 322
S A DL + + +P++R T
Sbjct: 278 VSLNAK---DLVRKLIVLDPKKRLTTFQ 302
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 54/205 (26%), Positives = 79/205 (38%), Gaps = 30/205 (14%)
Query: 126 KLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE- 183
RH L L Y +RL V EY L HL E E R Y AE
Sbjct: 204 NSRHPFLTALK-YSFQTHDRLCFVMEYANGGELFFHL-SRERVFSED----RARFYGAEI 257
Query: 184 --ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYST---NLAYTP 237
ALDY SE +Y DL ++ D++G +++ FGL K +DG + T Y
Sbjct: 258 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN---- 293
PE L + + G V+ +++ G+ P ++ L + L
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEIRFP 369
Query: 294 -FSSEEATVVFDLASRCLQYEPRER 317
EA L S L+ +P++R
Sbjct: 370 RTLGPEAK---SLLSGLLKKDPKQR 391
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 30/159 (18%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYST---NL 233
I + Y + H D+ +L + + ++ FGL
Sbjct: 155 ILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTA 212
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293
Y PE L+ + + ++S G ++ LL G PP G+N ++ +G
Sbjct: 213 YYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY--PP------FGGQNDQDIIKKVEKGK 263
Query: 294 FS---------SEEATVVFDLASRCLQYEPRERPNTKDL 323
+ S+EA +L L Y+ +R ++
Sbjct: 264 YYFDFNDWKNISDEA---KELIKLMLTYDYNKRCTAEEA 299
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 36/162 (22%)
Query: 181 IAEALDYCSSEGRPLYH-DL---NAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL 233
+ + Y + H DL N +L +++ D ++ FGL + +
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPEN---ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 234 ---AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL 290
Y PE LR G + ++S G +L LLSG PP + GKN ++
Sbjct: 185 GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFY------GKNEYDILKRVE 235
Query: 291 EGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDL 323
G ++ S++A DL + L + P R
Sbjct: 236 TGKYAFDLPQWRTISDDAK---DLIRKMLTFHPSLRITATQC 274
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Query: 408 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 467
RG+ F K F A+ Y I++ P Y+ S C++ + + +A +
Sbjct: 30 NRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEI 88
Query: 468 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 503
PD S A +A A L DA L + +
Sbjct: 89 KPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGD 124
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 38/166 (22%), Positives = 60/166 (36%), Gaps = 39/166 (23%)
Query: 181 IAEALDYCSSEGRPLYHDLN-AYR------VLF---DENGDPRLSCFGLMKNSRDGKSYS 230
I EA+ Y H +N A+R +L+ N +L+ FG K + S +
Sbjct: 170 IGEAIQYL--------HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 231 TNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM 286
T YTP PE L + ++S G ++ LL G PP ++ + +
Sbjct: 222 T-PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNHGLAISP--GMK 276
Query: 287 DSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDL 323
G + SEE L L+ EP +R +
Sbjct: 277 TRIRMGQYEFPNPEWSEVSEEVK---MLIRNLLKTEPTQRMTITEF 319
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 29/155 (18%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYT 236
+ A+ Y + + H D+ ++ E+ +L FG GK + T + Y
Sbjct: 139 LVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYC 196
Query: 237 PPEYLR-NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295
PE L N PE ++S G L L+ + P L+ +E
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEE--NPFCELEET------------VEAAIH 242
Query: 296 -----SEEATVVFDLASRCLQYEPRERPNTKDLVS 325
S+E L S LQ P R + LV+
Sbjct: 243 PPYLVSKELM---SLVSGLLQPVPERRTTLEKLVT 274
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 23/153 (15%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYT 236
I A+DYC + H DL VL D + + +++ FGL DG+ T + Y
Sbjct: 120 ILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
Query: 237 PPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295
PE + PE I+S G +L LL G +P +++ L G F
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG-TLP-------FDDEHVPTLFKKIRGGVFY 229
Query: 296 -----SEEATVVFDLASRCLQYEPRERPNTKDL 323
+ L LQ +P +R KD+
Sbjct: 230 IPEYLNRSVA---TLLMHMLQVDPLKRATIKDI 259
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 8e-05
Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 52/224 (23%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
++RH + L + + +L+ E + D LA+ E++ + ++ I
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ-FLK-----QI 117
Query: 182 AEALDYCSSEGRPLYHDLN-AYR------VLF----DENGDPRLSCFGLMKNSRDGKSYS 230
+ + Y H A+ ++ N +L FG+ G +
Sbjct: 118 LDGVHYL--------HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 169
Query: 231 TNLA---YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287
+ PE + + E+ ++S G + LLSG P G+ +
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASP------FLGETKQETLT 221
Query: 288 SHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKD 322
+ N+ SE A D R L +P+ R
Sbjct: 222 NISAVNYDFDEEYFSNTSELAK---DFIRRLLVKDPKRRMTIAQ 262
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 9e-05
Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 25/161 (15%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
+ A+ + G + H DL +LF ++N + ++ FG + +T
Sbjct: 115 LVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFT 172
Query: 237 P----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHA-LDMIRGKNILHLMDSHLE 291
PE L ++S G +L +LSG+ P + + + + +M +
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ--VPFQSHDRSLTCTSAVEIMKKIKK 230
Query: 292 GNFS---------SEEATVVFDLASRCLQYEPRERPNTKDL 323
G+FS S+EA DL L +P +R L
Sbjct: 231 GDFSFEGEAWKNVSQEAK---DLIQGLLTVDPNKRLKMSGL 268
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 9e-05
Identities = 57/334 (17%), Positives = 105/334 (31%), Gaps = 57/334 (17%)
Query: 18 KNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFSSDFIVS- 76
+ ++ N + A D A F + A +S + VS
Sbjct: 34 SGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSK 93
Query: 77 --ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLAN 134
G V+K A K D ++ +E + +L H L
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKL---AAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 135 LIGYCCDGDERLLVAEYMP-----NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS 189
L ++ +LV EY+ + + + E TI + M+ I E + +
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILF-MKQ-----ICEGIRHM- 203
Query: 190 SEGRPLYHDLN-AYR------VLFDENGDPRLSC--FGLMKNSRDGKSYSTNLA---YTP 237
H + + +L ++ FGL + + + N +
Sbjct: 204 -------HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLA 256
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295
PE + V+ + ++S G + LLSG + P G N +++ L +
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSG--LSPFL------GDNDAETLNNILACRWDLE 308
Query: 296 -------SEEATVVFDLASRCLQYEPRERPNTKD 322
SEEA + S+ L E R + +
Sbjct: 309 DEEFQDISEEAK---EFISKLLIKEKSWRISASE 339
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 38/191 (19%), Positives = 71/191 (37%), Gaps = 38/191 (19%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTNL--- 233
+ + L+Y S+G + H D+ +L G ++S G+ + + T+
Sbjct: 118 LIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 234 AYTPPEYLRNGRV--TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE 291
A+ PPE + I+S G L ++ +G P G NI L ++ +
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG-LYP-------FEGDNIYKLFENIGK 227
Query: 292 GNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPR 346
G+++ + DL L+YEP +R ++ ++ + P
Sbjct: 228 GSYAIPGDCGPPLS---DLLKGMLEYEPAKRF-------SIRQIRQHS----WFRKKHPP 273
Query: 347 HEEAPPTPQHP 357
E P P P
Sbjct: 274 AEAPVPIPPSP 284
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 41/167 (24%), Positives = 56/167 (33%), Gaps = 41/167 (24%)
Query: 181 IAEALDYCSSEGRPLYH-DL---NAYRVLF--DENGDPRLSCFGL----MKNSRDGKSYS 230
I AL Y ++G + H D+ N LF +++ + +L FGL K +
Sbjct: 177 IFSALHYLHNQG--ICHRDIKPEN---FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM 231
Query: 231 TNLAYTP----PEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH 284
T A TP PE L P+ +S G +L LL G P G N
Sbjct: 232 TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA--VPFP------GVNDAD 283
Query: 285 LMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKD 322
+ L S A DL S L ER +
Sbjct: 284 TISQVLNKKLCFENPNYNVLSPLAR---DLLSNLLNRNVDERFDAMR 327
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 44/223 (19%), Positives = 78/223 (34%), Gaps = 27/223 (12%)
Query: 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209
E M T A+ L I + ++ + I +AL Y + ++ D+ +L DE
Sbjct: 104 ELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER 161
Query: 210 GDPRLSCFGL---MKNSRDGKSYSTNLAYTPPEYLRNGRVTPE-----SVIFSFGTVLLD 261
G +L FG+ + + + + AY PE + T + ++S G L++
Sbjct: 162 GQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 262 LLSGKH-IPPSH----ALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASRCLQYEPR 315
L +G+ L + + L FS + F CL + R
Sbjct: 222 LATGQFPYKNCKTDFEVLTKVLQEEPPLLPG---HMGFSGD-----FQSFVKDCLTKDHR 273
Query: 316 ERPNTKDLVST---LAPLQNRPDVPSYVMLGIPRHEEAPPTPQ 355
+RP L+ DV S+ + + E P
Sbjct: 274 KRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRSGPS 316
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 61/480 (12%), Positives = 142/480 (29%), Gaps = 131/480 (27%)
Query: 44 LAAGSDGAPAFAEFSLADLRAATNNFSSDFIVS--ESGEKAPNVVYKGRLQDGNDNRRWI 101
L+ + F E L N+ F++S ++ ++ P+++ + ++ +R +
Sbjct: 72 LSKQEEMVQKFVEEVLRI------NY--KFLMSPIKTEQRQPSMMTRMYIE--QRDRLYN 121
Query: 102 AVKKFTKHAWPDPKQFA----------DEAW-------GVGK-------LR-HKRLANL- 135
+ F K+ + + G GK +K +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD 181
Query: 136 -------IGYCCDGDERL-----LVAEYMPNDT-LAKHLFHWENQTIEWAMRLRVAL--- 179
+ C + L L+ + PN T + H + + + LR L
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241
Query: 180 -YIAEAL----DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234
Y L + +++ NA F+ LSC L+ +R K + L+
Sbjct: 242 PY-ENCLLVLLNVQNAK------AWNA----FN------LSCKILL-TTRF-KQVTDFLS 282
Query: 235 -----YTPPEYLRNGRVTPESV-IFS--FGTVLLDL-LSGKHIPPSHALDMIRGKNILHL 285
+ ++ E + DL P L +I ++ +
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-RRLSII-AES-IRD 339
Query: 286 MDSHLEG--NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLG 343
+ + + + ++ T + + + L EP E + + L+ +P+ + L
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVL--EPAE---YRKMFDRLSVFPPSAHIPTIL-LS 393
Query: 344 IPRHEEAPPTPQHPLSPMGDAC-----SRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQ 398
+ + ++ + + +I I + K +
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN----------EY 443
Query: 399 QM-RDMLEARKRGDVAFREKEFKTAVDCYS-QFIDVGTMVSPTVYARRSLCHLM-CDQPD 455
+ R +++ + +D Y I + HL + P+
Sbjct: 444 ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI---------GH------HLKNIEHPE 488
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 36/162 (22%), Positives = 54/162 (33%), Gaps = 40/162 (24%)
Query: 181 IAEALDYCSSEGRPLYHDLN-AYR-------VLFDENGDP---RLSCFGLMKNSRDGKSY 229
I + ++Y H +R + DE+G+P R+ FG K R
Sbjct: 125 ITKTVEYL--------HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176
Query: 230 STNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285
YT PE L I+S G +L +L+G P +
Sbjct: 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANG---PDDTPEEI 231
Query: 286 MDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERP 318
+ G FS S+ A DL S+ L +P +R
Sbjct: 232 LARIGSGKFSLSGGYWNSVSDTAK---DLVSKMLHVDPHQRL 270
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 41/193 (21%), Positives = 70/193 (36%), Gaps = 22/193 (11%)
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGR 193
Y + L LV M + H+++ + + R Y A+ L++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIFYTAQIVSGLEHLHQRN- 309
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPE 249
+Y DL VL D++G+ R+S GL + G++ + A TP PE L
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHALDMIRG-----KNILHLMDSHLEGNFSSEEATVVFD 304
F+ G L ++++ + P A + +L FS D
Sbjct: 370 VDYFALGVTLYEMIAAR--GPFRARGEKVENKELKQRVLE-QAVTYPDKFSPASK----D 422
Query: 305 LASRCLQYEPRER 317
LQ +P +R
Sbjct: 423 FCEALLQKDPEKR 435
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 43/221 (19%), Positives = 78/221 (35%), Gaps = 42/221 (19%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYT 236
I +DYC + H DL VL D + + +++ FGL DG+ T + Y
Sbjct: 125 ILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 182
Query: 237 PPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295
PE + PE I+S G +L LL G +P ++ L +G F
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCG-TLP-------FDDDHVPTLFKKICDGIFY 234
Query: 296 -----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEA 350
+ L LQ +P +R +T+ ++ + +P++
Sbjct: 235 TPQYLNPSVI---SLLKHMLQVDPMKR-------ATIKDIREHE----WFKQDLPKYLFP 280
Query: 351 PPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNEL 391
+ +D A+ ++ ++E + L
Sbjct: 281 EDPSYS--------STMIDDEALKEVCEKFECSEEEVLSCL 313
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 12/96 (12%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 409 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 468
G+ ++ ++F A++ Y++ ++ T R+ + + A+ A
Sbjct: 11 EGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVEQG 68
Query: 469 PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504
+ + + + + A++ LK+ +K
Sbjct: 69 REMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQK 104
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 45/170 (26%)
Query: 183 EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLR 242
E L+Y G+ ++ D+ A +L E+G +++ FG S LA
Sbjct: 132 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFG----------VSAFLATGGDITRN 180
Query: 243 NGRVT---------PESV-----------IFSFGTVLLDLLSGK----HIPPSHALDMI- 277
R T PE + I+SFG ++L +G PP L +
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL 240
Query: 278 -RGKNILH--LMDSHLEGNFSSEEATVVF-DLASRCLQYEPRERPNTKDL 323
L + D + + F + S CLQ +P +RP +L
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKS-----FRKMISLCLQKDPEKRPTAAEL 285
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 38/219 (17%), Positives = 83/219 (37%), Gaps = 43/219 (19%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
RH+ + +L +E +++ E++ + + F + I + +
Sbjct: 57 IARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ-----V 111
Query: 182 AEALDYCSSEGRPLYH-DL---NAYRVLF--DENGDPRLSCFGLMKNSRDGKSYSTNLA- 234
EAL + S + H D+ N +++ + ++ FG + + G ++
Sbjct: 112 CEALQFLHSHN--IGHFDIRPEN---IIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA 166
Query: 235 --YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292
Y PE ++ V+ + ++S GT++ LLSG I P + ++++ +
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG--INP------FLAETNQQIIENIMNA 218
Query: 293 NFS---------SEEATVVFDLASRCLQYEPRERPNTKD 322
++ S EA D R L E + R +
Sbjct: 219 EYTFDEEAFKEISIEAM---DFVDRLLVKERKSRMTASE 254
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 5e-04
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 37/157 (23%)
Query: 181 IAEALDYCSSEGRPLYH-DL---NAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL 233
I E++ YC S G + H +L N +L + +L+ FGL D +++
Sbjct: 114 ILESIAYCHSNG--IVHRNLKPEN---LLLASKAKGAAVKLADFGLAIEVNDSEAWHG-F 167
Query: 234 AYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH 289
A TP PE L+ + I++ G +L LL G PP ++ L
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG--YPP------FWDEDQHRLYAQI 219
Query: 290 LEGNFS---------SEEATVVFDLASRCLQYEPRER 317
G + + EA L L P++R
Sbjct: 220 KAGAYDYPSPEWDTVTPEAK---SLIDSMLTVNPKKR 253
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 7e-04
Identities = 41/227 (18%), Positives = 79/227 (34%), Gaps = 53/227 (23%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL-------MKNSRDGKS 228
+V++ + + L Y + + ++ D+ +L + G+ +L FG+ M NS G
Sbjct: 135 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194
Query: 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPPSHALDMIRGKNILHLMD 287
Y PE L+ + +S I+S G L+++ G++ IPP A ++ D
Sbjct: 195 S-----YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 249
Query: 288 SHLEGNFSSEEAT-------------VVFDLA------------------------SRCL 310
+ +F+L ++CL
Sbjct: 250 AAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCL 309
Query: 311 QYEPRERPNTKDLVST---LAPLQNRPDVPSYVMLGIPRHEEAPPTP 354
P ER + K L+ D ++ I ++ + PT
Sbjct: 310 IKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPSTPTH 356
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-04
Identities = 49/252 (19%), Positives = 93/252 (36%), Gaps = 27/252 (10%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
VYK + + A K + + + + E + H + L+G +
Sbjct: 35 VYKAK---NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKL 91
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205
++ E+ P + + + E +++ V + EAL++ S+ ++ DL A VL
Sbjct: 92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRI-IHRDLKAGNVL 149
Query: 206 FDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PE-----YLRNGRVTPESVIFSFG 256
GD RL+ FG+ + + TP PE +++ ++ I+S G
Sbjct: 150 MTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 209
Query: 257 TVLLDLLSGK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASRCLQ 311
L+++ + + P L I + L+ +S E F D L
Sbjct: 210 ITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLT---PSKWSVE-----FRDFLKIALD 261
Query: 312 YEPRERPNTKDL 323
P RP+ L
Sbjct: 262 KNPETRPSAAQL 273
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 50/258 (19%), Positives = 91/258 (35%), Gaps = 32/258 (12%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGY 138
GE + VYK + + +A+K+ + D ++ E + + + G
Sbjct: 38 GEGSYGSVYKAI---HKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 139 CCDGDERLLVAEYMP----NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
+ +V EY +D + I A L+ L + L+Y +
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI--ATILQSTL---KGLEYLHFMRK- 146
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPES 250
++ D+ A +L + G +L+ FG+ D + + TP PE ++ +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVA 206
Query: 251 VIFSFGTVLLDLLSGK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DL 305
I+S G +++ GK I P A+ MI +S F D
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPE---LWSDN-----FTDF 258
Query: 306 ASRCLQYEPRERPNTKDL 323
+CL P +R L
Sbjct: 259 VKQCLVKSPEQRATATQL 276
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 8e-04
Identities = 39/157 (24%), Positives = 57/157 (36%), Gaps = 36/157 (22%)
Query: 181 IAEALDYCSSEGRPLYH-DL---NAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL 233
+ A+ Y G + H DL N +L+ +EN ++ FGL K ++G ST
Sbjct: 115 VLSAVKYLHENG--IVHRDLKPEN---LLYLTPEENSKIMITDFGLSKMEQNGI-MSTAC 168
Query: 234 ---AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL 290
Y PE L + +S G + LL G PP + L +
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG--YPP------FYEETESKLFEKIK 220
Query: 291 EGNFS---------SEEATVVFDLASRCLQYEPRERP 318
EG + SE A D L+ +P ER
Sbjct: 221 EGYYEFESPFWDDISESAK---DFICHLLEKDPNERY 254
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 24/162 (14%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL-- 233
++A+ I +AL++ S+ ++ D+ VL + G ++ FG+ D + +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 234 -AYTPPEYLRNGRVTPESV---------IFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL 283
Y PE R+ PE I+S G +++L + S + K ++
Sbjct: 173 KPYMAPE-----RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
Query: 284 HLMDSHL-EGNFSSEEATVVF-DLASRCLQYEPRERPNTKDL 323
L FS+E F D S+CL+ +ERP +L
Sbjct: 228 EEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPTYPEL 264
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 512 | |||
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.84 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.82 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.76 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.74 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.74 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.73 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.73 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.71 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.7 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.7 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.69 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.67 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.62 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.62 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.62 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.62 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.61 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.6 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.6 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.6 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.6 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.6 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.59 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.59 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.57 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.57 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.57 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.56 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.56 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.56 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.56 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.56 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.55 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.55 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.53 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.52 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.51 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.51 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.51 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.5 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.48 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.48 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.48 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.46 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.45 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.45 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.44 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.44 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.43 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.4 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.39 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.39 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.39 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.38 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.37 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.36 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.36 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.36 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.34 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.33 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.33 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.33 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.33 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.33 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.33 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.32 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.32 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.31 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.31 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.3 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.3 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.3 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.29 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.29 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.28 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.28 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.28 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.27 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.27 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.26 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.26 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.26 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.26 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.26 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.26 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.25 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.25 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.25 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.25 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.25 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.24 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.24 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.23 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.23 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.23 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.22 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.22 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.22 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.22 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.22 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.2 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.2 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.2 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.19 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.19 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.19 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.19 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.18 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.18 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.18 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.17 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.15 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.14 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.12 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.11 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.09 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.09 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.09 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.08 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.08 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.07 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.07 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.07 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.07 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.07 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.06 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.06 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.05 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.05 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.04 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.03 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 99.03 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.03 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.03 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.02 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.02 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.02 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.02 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.02 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.01 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.01 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.01 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.01 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.0 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.0 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.0 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.0 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 98.99 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 98.99 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 98.99 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.99 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.98 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.98 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 98.98 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.98 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 98.97 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.97 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.97 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.96 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.96 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 98.96 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.96 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.94 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.93 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.93 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 98.92 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.92 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.91 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.9 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.9 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.89 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.88 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.88 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.87 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.87 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.86 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.84 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.83 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.81 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.81 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.8 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.8 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.8 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.79 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.78 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.78 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.78 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.75 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.74 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.73 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.67 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.67 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.64 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.6 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.6 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.58 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.57 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.57 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.54 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.54 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.53 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.53 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.52 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.51 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.5 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.49 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.47 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.44 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.43 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.38 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.38 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.37 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.35 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.3 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.29 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.19 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.16 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.12 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.08 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.07 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.05 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.98 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.97 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.97 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.92 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.91 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.89 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.86 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.84 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.77 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.76 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.67 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.65 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.64 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.6 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.6 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.56 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.51 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.5 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.48 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.46 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.43 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.35 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.28 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.26 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.18 |
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-59 Score=456.95 Aligned_cols=249 Identities=18% Similarity=0.227 Sum_probs=212.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.++++||+|+||.||+|.++. +++.||||++........+.+.+|+.+|+.++|||||+++++|.+++.+|||||
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hcEEeEEeecCcCeEEEEEEECC---CCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 36788899999999999999988 889999999987766667789999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
||+||+|.+++.+ +.+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 152 y~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 227 (346)
T 4fih_A 152 FLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227 (346)
T ss_dssp CCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred CCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc
Confidence 9999999999963 56999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
.+.+||+.|||||++.+..|+.++|||||||++|||++|+.||......... ..+..... .....+...++++.+||
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~-~~i~~~~~--~~~~~~~~~s~~~~dli 304 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLP--PRLKNLHKVSPSLKGFL 304 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSSC--CCCSCGGGSCHHHHHHH
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-HHHHcCCC--CCCCccccCCHHHHHHH
Confidence 3568999999999999999999999999999999999999887653211111 11111111 11122345677899999
Q ss_pred HHhhccCCCCCCChHHHHHHhcc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+||+.||++|||+.|+++|-+-
T Consensus 305 ~~~L~~dP~~R~ta~e~l~Hp~~ 327 (346)
T 4fih_A 305 DRLLVRDPAQRATAAELLKHPFL 327 (346)
T ss_dssp HHHSCSSTTTSCCHHHHTTCGGG
T ss_pred HHHcCCChhHCcCHHHHhcCHhh
Confidence 99999999999999999988543
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-59 Score=458.78 Aligned_cols=248 Identities=16% Similarity=0.211 Sum_probs=207.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..|.+++.||+|+||.||+|+++. +++.||||++....... .+.+.+|+++|++|+|||||++++++.+++.+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTE---DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCEEEEEEC------CEEEEEETT---TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 468899999999999999999987 88999999998654432 3579999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
|||||+||+|.++|.......+++..++.|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999999997656677899999999999999999999999 999999999999999999999999999876543
Q ss_pred ---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...+||+.|||||++.+..|+.++|||||||+||||+||+.||......... ..+.... ....+...++++.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~----~~i~~~~-~~~~~~~~s~~~~ 254 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV----LKIISGS-FPPVSLHYSYDLR 254 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHTC-CCCCCTTSCHHHH
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH----HHHHcCC-CCCCCccCCHHHH
Confidence 2457999999999999999999999999999999999999887654221111 1111111 1233455677899
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 010340 304 DLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+||.+||+.||++|||+.++++|
T Consensus 255 ~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 255 SLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 99999999999999999999987
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-59 Score=455.56 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=209.2
Q ss_pred ccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..+.++||+|+||.||+|++.. ...+++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+.++|||
T Consensus 43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~ 122 (329)
T 4aoj_A 43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF 122 (329)
T ss_dssp EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 4456789999999999999763 22267899999998655444568999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeec
Q 010340 150 EYMPNDTLAKHLFHWE-------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSC 216 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~D 216 (512)
|||++|+|.++|+... ..+++|.+++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|
T Consensus 123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECC
T ss_pred EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcc
Confidence 9999999999997532 346999999999999999999999999 99999999999999999999999
Q ss_pred ccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccc
Q 010340 217 FGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSH 289 (512)
Q Consensus 217 fg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
||+++..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||....... +...+...
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~-----~~~~i~~g 276 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-----AIDCITQG 276 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH-----HHHHHHHT
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHcC
Confidence 9999865332 24568999999999999999999999999999999999 887765432111 11222222
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
.....|..+++.+.+|+.+||+.||++|||+.+|+++|+.+.+.+
T Consensus 277 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 277 RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 334556677888999999999999999999999999999887543
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-59 Score=451.09 Aligned_cols=256 Identities=24% Similarity=0.323 Sum_probs=211.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+.++||+|+||.||+|.+... ..+++.||||+++.......++|.+|+++|++++|||||+++|+|.+++.++||
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 455677899999999999997642 225788999999865444456799999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 149 AEYMPNDTLAKHLFHW-----------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
||||++|+|.++|+.. ....++|.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCc
Confidence 9999999999999742 2357999999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhccccc
Q 010340 218 GLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHL 290 (512)
Q Consensus 218 g~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (512)
|+++..... ....||+.|||||++.++.|+.++|||||||+||||+| |+.||...... .+...+....
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~i~~~~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVIECITQGR 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHHTC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCC
Confidence 999864332 23468999999999999999999999999999999999 88776543211 1122222222
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 291 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
....|..+++.+.+|+.+||+.||++|||+.+|++.|+.+.+
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 334566778889999999999999999999999999988754
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-59 Score=448.79 Aligned_cols=256 Identities=22% Similarity=0.302 Sum_probs=211.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+...++++||+|+||.||+|.+.. ...+++.||||+++..... ..++|.+|+.+|++++|||||+++|+|.+.+.++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 345578899999999999999753 1226788999999765433 3568999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 212 (512)
||||||++|+|.++|.... ...++|..++.|+.||+.||.|||+++ ||||||||+||||++++.+
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCE
Confidence 9999999999999996422 246899999999999999999999999 9999999999999999999
Q ss_pred eeecccCccccCC------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhh
Q 010340 213 RLSCFGLMKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHL 285 (512)
Q Consensus 213 kl~Dfg~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~ 285 (512)
||+|||+++.... .....||+.|||||++.++.|+.++|||||||+||||+| |+.||..... ..+...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-----~~~~~~ 259 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVVEM 259 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-----HHHHHH
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-----HHHHHH
Confidence 9999999986432 234578999999999999999999999999999999999 7777654321 112222
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+......+.|..++..+.+|+.+||+.||++|||+.+|+++|+...
T Consensus 260 i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 260 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2233334556677888999999999999999999999999998753
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-58 Score=443.38 Aligned_cols=255 Identities=20% Similarity=0.263 Sum_probs=204.6
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+++..+.++||+|+||+||+|++.. .||||+++...... .+.|.+|+.+|++++|||||+++|+|.+ +.++
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~ 107 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA 107 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence 4556678899999999999998753 39999997544322 3579999999999999999999999865 5689
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
||||||+||+|.++|+. ....+++..++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+|+....
T Consensus 108 iVmEy~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EEEECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EEEEcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999999999964 4567999999999999999999999998 99999999999999999999999999986532
Q ss_pred -----CCccccCcccCCcccccC---CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 226 -----GKSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 226 -----~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
.....||+.|||||++.+ ++|+.++|||||||+||||+||+.||............+............+..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 265 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN 265 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccccc
Confidence 234579999999999964 458999999999999999999998875421111110111111111111234556
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
+++.+.+|+.+||+.||++|||+.+|+++|+.++.
T Consensus 266 ~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 266 CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp SCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 77889999999999999999999999999998864
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-58 Score=443.83 Aligned_cols=261 Identities=19% Similarity=0.195 Sum_probs=216.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+|.+++.||+|+||+||+|+++. +++.||||++.+.. ....+.+.+|+++|++++|||||++++++.+.+.+||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~---~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELA---TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccEEEEEEecccCeEEEEEEECC---CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 57789999999999999999988 88999999997542 2345679999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
|||||+||+|.+++. ..+.+++..+..|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+....
T Consensus 110 vmEy~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 110 GLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp EECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EEecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999999999997 4567999999999999999999999999 99999999999999999999999999986542
Q ss_pred ----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 226 ----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
..+.+||+.|||||++.+..|+.++|||||||++|||+||+.||......... ..+... ...++...+++
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~----~~i~~~--~~~~p~~~s~~ 260 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF----AKIIKL--EYDFPEKFFPK 260 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHT--CCCCCTTCCHH
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcC--CCCCCcccCHH
Confidence 23568999999999999999999999999999999999999887653222111 111111 12345566778
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccccCC
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGI 344 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~ 344 (512)
+.+||.+||+.||++|||+.|++.+- .+++.|.+....|...
T Consensus 261 ~~dli~~lL~~dp~~R~t~~e~~~~~-~i~~Hp~F~~idw~~l 302 (311)
T 4aw0_A 261 ARDLVEKLLVLDATKRLGCEEMEGYG-PLKAHPFFESVTWENL 302 (311)
T ss_dssp HHHHHHHHSCSSGGGSTTSGGGTCHH-HHHTSGGGTTCCCTTG
T ss_pred HHHHHHHHccCCHhHCcChHHHcCCH-HHHCCCCcCCCCHHHh
Confidence 99999999999999999999875442 2344555544444443
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-58 Score=444.26 Aligned_cols=248 Identities=17% Similarity=0.133 Sum_probs=208.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+..+.+.++||+|+||.||+|+++. +++.||||+++.... ..+|+.+|+.++|||||++++++.+++.+|||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~---~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQ---TGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECC---CCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 3456677889999999999999987 889999999976432 34799999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeeecccCccccCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~- 226 (512)
||||+||+|.++|. ..+.+++..++.|+.||+.||.|||+++ ||||||||+||||+.+| ++||+|||+|+.....
T Consensus 129 mEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 129 MELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp ECCCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred EeccCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999999997 3467999999999999999999999999 99999999999999987 6999999999865432
Q ss_pred --------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc-CCCCCHH
Q 010340 227 --------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL-EGNFSSE 297 (512)
Q Consensus 227 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 297 (512)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||..... ......+..... ...+++.
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~~ 281 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR----GPLCLKIASEPPPIREIPPS 281 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC----SCCHHHHHHSCCGGGGSCTT
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH----HHHHHHHHcCCCCchhcCcc
Confidence 235799999999999999999999999999999999999988754311 111111111111 1134556
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+++.+.+||.+||+.||.+|||+.|++++|....
T Consensus 282 ~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 7788999999999999999999999999987654
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-58 Score=455.55 Aligned_cols=248 Identities=18% Similarity=0.231 Sum_probs=212.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.++++||+|+||.||+|.++. +++.||||++........+.+.+|+.+|+.++|||||+++++|.+.+.+|||||
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeeEeccCcCcEEEEEEECC---CCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 47788999999999999999988 889999999987766667789999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
||+||+|.+++.. +.+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 229 y~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 229 FLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp CCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred CCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 9999999999953 56999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
.+.+||+.|||||++.+..|+.++|||||||++|||++|+.||......... ..+..... .....+...++.+.+||
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~-~~i~~~~~--~~~~~~~~~s~~~~dli 381 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLP--PRLKNLHKVSPSLKGFL 381 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCC--CCCSCTTSSCHHHHHHH
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-HHHHcCCC--CCCcccccCCHHHHHHH
Confidence 3568999999999999999999999999999999999999887653221111 11111111 11122345567799999
Q ss_pred HHhhccCCCCCCChHHHHHHhc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+||..||++|||+.|+++|-+
T Consensus 382 ~~~L~~dP~~R~ta~ell~Hp~ 403 (423)
T 4fie_A 382 DRLLVRDPAQRATAAELLKHPF 403 (423)
T ss_dssp HHHSCSSTTTSCCHHHHTTCGG
T ss_pred HHHcCCChhHCcCHHHHhcCHH
Confidence 9999999999999999998744
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-56 Score=482.53 Aligned_cols=240 Identities=18% Similarity=0.198 Sum_probs=192.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCe----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE---- 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 144 (512)
..|.+++.||+|+||.||+|.+... +++.||||++...... ....+.+|+.++.+++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNV--NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGG--TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCC--CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 4677888999999999999998642 4788999998754321 13468899999999999999999999987665
Q ss_pred -eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 145 -RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 145 -~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
.+|||||++|++|.+++. ..+++..++.|+.||+.||.|||+++ |+||||||+|||++.+ .+||+|||+++..
T Consensus 158 ~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhc
Confidence 699999999999998774 27999999999999999999999999 9999999999999875 8999999999988
Q ss_pred CCCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 224 RDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 224 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..|+... .... ..........++.+.
T Consensus 232 ~~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~--------~~~~----~~~~~~~~~~~~~l~ 298 (681)
T 2pzi_A 232 NSFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGR--------YVDG----LPEDDPVLKTYDSYG 298 (681)
T ss_dssp TCCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTE--------ECSS----CCTTCHHHHHCHHHH
T ss_pred ccCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccc--------cccc----ccccccccccCHHHH
Confidence 777777899999999999765 488999999999999999998654321 0000 001111123456788
Q ss_pred HHHHHhhccCCCCCCC-hHHHHHHhccc
Q 010340 304 DLASRCLQYEPRERPN-TKDLVSTLAPL 330 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps-~~~vl~~L~~~ 330 (512)
+||.+||+.||.+||+ ++++...|..+
T Consensus 299 ~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 299 RLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 9999999999999995 45555555543
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-57 Score=431.04 Aligned_cols=246 Identities=17% Similarity=0.220 Sum_probs=199.3
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee----CCeeEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLL 147 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 147 (512)
+..+||+|+||.||+|.+.. ++..||||++....... .+.|.+|+++|++++|||||+++++|.+ ...++|
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECC---CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 44568999999999999987 78899999997654332 3579999999999999999999999875 345899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeec-CCCCCeeecccCccccCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~~ 225 (512)
|||||+||+|.+++. ..+.+++..++.|+.||+.||.|||+++ +||||||||+||||+ .+|.+||+|||+|+....
T Consensus 107 vmEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 107 VTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 999999999999997 3567999999999999999999999976 599999999999998 479999999999986543
Q ss_pred C--CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 226 G--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 226 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
. .+.+||+.|||||++.+ .|+.++|||||||+||||+||+.||........... .+........++...++++.
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~ 260 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEVK 260 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHHH
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHH---HHHcCCCCCCCCccCCHHHH
Confidence 3 35689999999999864 699999999999999999999988753211110000 11111111122333456788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+||.+||+.||++|||+.++++|-+
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~Hp~ 285 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHccCChhHCcCHHHHhcCcc
Confidence 9999999999999999999998743
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-57 Score=425.85 Aligned_cols=246 Identities=20% Similarity=0.233 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
.+|.+++.||+|+||+||+|.+.. +++.||||++++.... ..+.+.+|+.+|++++|||||++++++.+.+.++
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ 89 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTT---TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII 89 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTT---TCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 467789999999999999999987 8899999999765432 2457999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
|||||| +|+|.+++. ..+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 90 ivmEy~-~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 90 MVIEYA-GNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEEECC-CEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EEEeCC-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999999 679999997 4567999999999999999999999999 999999999999999999999999999865442
Q ss_pred ---CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.+.+||+.|||||++.+..+ +.++|||||||++|||+||+.||......... ..+.. ....++...++.+
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~----~~i~~--~~~~~p~~~s~~~ 239 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF----KNISN--GVYTLPKFLSPGA 239 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHH--TCCCCCTTSCHHH
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHc--CCCCCCCCCCHHH
Confidence 35689999999999998886 57999999999999999999887654222111 11111 1123445567788
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+||.+||+.||++|||+.++++|-+
T Consensus 240 ~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 240 AGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred HHHHHHHccCChhHCcCHHHHHcCcc
Confidence 99999999999999999999999754
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-57 Score=437.47 Aligned_cols=247 Identities=19% Similarity=0.220 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+|.+++.||+|+||+||+|+...+..+++.||||++++.... ....+.+|+++|++++|||||++++++.+++.+|||
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 577999999999999999998665557889999999764322 234688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--- 225 (512)
||||+||+|.+++. ..+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 105 mEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 181 (304)
T 3ubd_A 105 LDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181 (304)
T ss_dssp ECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred EEcCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence 99999999999997 3467999999999999999999999999 99999999999999999999999999986432
Q ss_pred -CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
..+.+||+.|||||++.+..|+.++|||||||++|||+||+.||......... ..+... ...+|...++++.+
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~~ 255 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM----TMILKA--KLGMPQFLSPEAQS 255 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCTTSCHHHHH
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHH----HHHHcC--CCCCCCcCCHHHHH
Confidence 23568999999999999999999999999999999999999887653222111 111111 22345566778999
Q ss_pred HHHHhhccCCCCCCCh-----HHHHHH
Q 010340 305 LASRCLQYEPRERPNT-----KDLVST 326 (512)
Q Consensus 305 li~~cl~~~p~~Rps~-----~~vl~~ 326 (512)
||.+||+.||++|||+ +++++|
T Consensus 256 li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 256 LLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 9999999999999985 577765
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-56 Score=437.45 Aligned_cols=259 Identities=19% Similarity=0.252 Sum_probs=214.0
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCC-CCccceEEEEeeC-
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRH-KRLANLIGYCCDG- 142 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h-~niv~l~~~~~~~- 142 (512)
.++++.+++.||+|+||.||+|.+... ..+++.||||++....... .+.|.+|+++|.+++| ||||+++|+|.+.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 345677888999999999999998653 2246789999998654322 3569999999999965 9999999999764
Q ss_pred CeeEEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~ 208 (512)
+.++||||||++|+|.++|+... ...+++..++.|+.||+.||.|||+++ ||||||||+|||++.
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 220 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCC
Confidence 56899999999999999997532 345899999999999999999999999 999999999999999
Q ss_pred CCCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccc
Q 010340 209 NGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKN 281 (512)
Q Consensus 209 ~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~ 281 (512)
++.+||+|||+|+..... ....||+.|||||++.+..|+.++|||||||+||||+| |+.||...... ..
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~----~~ 296 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EE 296 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HH
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH----HH
Confidence 999999999999865432 23467899999999999999999999999999999998 88776542111 11
Q ss_pred hhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 282 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+...+....+...|..+++++.+|+.+||+.||++|||+.+|+++|+.+.
T Consensus 297 ~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 22233333444566677788999999999999999999999999998764
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-55 Score=419.05 Aligned_cols=242 Identities=17% Similarity=0.257 Sum_probs=190.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCC------
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD------ 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 143 (512)
+|.+++.||+|+||.||+|+++. +++.||||+++..... ..+.+.+|+++|++++|||||+++++|.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKV---DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETT---TCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hCEEeeEEecCCCeEEEEEEECC---CCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 46688999999999999999987 8899999999754422 2357899999999999999999999997644
Q ss_pred ------eeEEEEEccCCCCHHhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeec
Q 010340 144 ------ERLLVAEYMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSC 216 (512)
Q Consensus 144 ------~~~lv~E~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~D 216 (512)
.+|||||||+||+|.+++..... ...++..++.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEcc
Confidence 37899999999999999974322 23566778999999999999999999 99999999999999999999999
Q ss_pred ccCccccCCC----------------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc
Q 010340 217 FGLMKNSRDG----------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK 280 (512)
Q Consensus 217 fg~a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~ 280 (512)
||+|+..... ...+||+.|||||++.+..|+.++|||||||++|||++ ||....... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~---~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV---R 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH---H
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH---H
Confidence 9999865432 23469999999999999999999999999999999996 554322111 1
Q ss_pred chhhhcccccCCCCC---HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 281 NILHLMDSHLEGNFS---SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 281 ~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+..+ ....+| ...++.+.+||.+||+.||++|||+.+++++
T Consensus 236 ~~~~~----~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TLTDV----RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHH----HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHH----hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111 112233 2344567889999999999999999999986
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-54 Score=420.24 Aligned_cols=252 Identities=19% Similarity=0.232 Sum_probs=194.2
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCC----eeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD----ERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 147 (512)
+.+.++||+|+||.||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|.+.+ .++|
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-----~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-----TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 34556799999999999987 567899999975431 1122345666677889999999999998754 5799
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCccccccCccceeecCCCCCeeecccC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE--------GRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
|||||++|+|.++|+. ..++|..+++|+.|++.||+|||++ + ||||||||+||||+.++++||+|||+
T Consensus 79 V~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCC
Confidence 9999999999999963 4699999999999999999999987 6 99999999999999999999999999
Q ss_pred ccccCCC--------CccccCcccCCcccccCC------CCCCCCcEEehHHHHHHHHhCCCCCChhhHH-----HHh--
Q 010340 220 MKNSRDG--------KSYSTNLAYTPPEYLRNG------RVTPESVIFSFGTVLLDLLSGKHIPPSHALD-----MIR-- 278 (512)
Q Consensus 220 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg~~~~~~~~~~-----~~~-- 278 (512)
++..... ....||+.|||||++.+. .++.++|||||||+||||+||..|+...... ...
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence 9765332 234689999999999754 4678999999999999999998654221000 000
Q ss_pred c---cch-hhhcccccCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 279 G---KNI-LHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 279 ~---~~~-~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
. ..+ ..+.....++.+| ..++..+.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 235 ~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0 001 1112222333333 34567789999999999999999999999999987643
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-52 Score=419.73 Aligned_cols=251 Identities=17% Similarity=0.203 Sum_probs=201.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee------C
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD------G 142 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~------~ 142 (512)
.|.+++.||+|+||+||+|.++. +++.||||+++...... .+.+.+|+++|+.++|||||++++++.. .
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~---t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRL---TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CeEEEEEEecccCeEEEEEEECC---CCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 57889999999999999999987 88999999997654322 3568899999999999999999999864 3
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
+.+|||||||+ |+|.+++. ..+.+++..+..|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred CEEEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeee
Confidence 67899999996 68999997 5678999999999999999999999999 99999999999999999999999999986
Q ss_pred cCC--------CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------ccc-----
Q 010340 223 SRD--------GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------GKN----- 281 (512)
Q Consensus 223 ~~~--------~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~~----- 281 (512)
... ..+.+||+.|||||++.+.. ++.++||||+||++|||++|+.||......... +..
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 432 23568999999999988754 689999999999999999999887653211100 000
Q ss_pred -------hhhhcccc-cCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 282 -------ILHLMDSH-LEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 282 -------~~~~~~~~-~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....+... .....+ +..++.+.+||.+||..||.+|||+.++|+|-+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 347 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHh
Confidence 00000000 000011 123567889999999999999999999998844
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=407.35 Aligned_cols=249 Identities=18% Similarity=0.209 Sum_probs=199.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.|.+++.||+|+||+||+|+++....+++.||||++.... ...++.+|+++|+.+ +|||||++++++.+.++++|||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 3678889999999999999986433378899999987543 456789999999998 7999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-CCCeeecccCccccCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+||+|.+++. .+++.++..++.||+.||.|||+++ ||||||||+|||++.+ +.+||+|||+|+...+.
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999984 4899999999999999999999999 9999999999999876 89999999999754321
Q ss_pred ------------------------------CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHH
Q 010340 227 ------------------------------KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALD 275 (512)
Q Consensus 227 ------------------------------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~ 275 (512)
.+.+||+.|||||++.+.. ++.++||||+||++|||+||+.||+....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 1346999999999998764 899999999999999999999888643211
Q ss_pred HHhccchh-------------------------------hhccc---------c---------cCCCCCHHHHHHHHHHH
Q 010340 276 MIRGKNIL-------------------------------HLMDS---------H---------LEGNFSSEEATVVFDLA 306 (512)
Q Consensus 276 ~~~~~~~~-------------------------------~~~~~---------~---------~~~~~~~~~~~~~~~li 306 (512)
...-..+. ..... . .........++++.+||
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 10000000 00000 0 00001123456788999
Q ss_pred HHhhccCCCCCCChHHHHHHh
Q 010340 307 SRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L 327 (512)
.+||+.||++|||++|+++|-
T Consensus 334 ~~lL~~dP~~R~ta~eaL~Hp 354 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALLHP 354 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHTSG
T ss_pred HHHCcCChhHCcCHHHHhcCc
Confidence 999999999999999999874
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=428.70 Aligned_cols=250 Identities=18% Similarity=0.140 Sum_probs=205.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHH---HHHHHhcCCCCCccceEEEEeeC
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFAD---EAWGVGKLRHKRLANLIGYCCDG 142 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~ 142 (512)
.++|.+++.||+|+||.||+|+.+. +++.||||++.+... .....+.+ ++.+++.++|||||+++++|.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~---tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~ 264 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP 264 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred hHHeEEEEEEecccCeEEEEEEECC---CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC
Confidence 4568889999999999999999988 899999999975421 22233333 46777888999999999999999
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
+.+|||||||+||+|.++|. ..+.+++..++.|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+.
T Consensus 265 ~~lylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 265 DKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp SEEEEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999999997 3467999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCC--CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 223 SRDG--KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 223 ~~~~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
.... .+.+||+.|||||++.+ ..|+.++|||||||+||||++|+.||......... .....+.. ....++...+
T Consensus 342 ~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i~~--~~~~~p~~~S 418 (689)
T 3v5w_A 342 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLT--MAVELPDSFS 418 (689)
T ss_dssp CSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHHHH--CCCCCCTTSC
T ss_pred cCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhcC--CCCCCCccCC
Confidence 6543 46789999999999965 57999999999999999999999887643211000 00011111 1234556677
Q ss_pred HHHHHHHHHhhccCCCCCCC-----hHHHHHHh
Q 010340 300 TVVFDLASRCLQYEPRERPN-----TKDLVSTL 327 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps-----~~~vl~~L 327 (512)
+++.+||.+||..||.+|++ +.+|++|-
T Consensus 419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 88999999999999999998 57777663
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-51 Score=427.51 Aligned_cols=250 Identities=18% Similarity=0.154 Sum_probs=211.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..|.+++.||+|+||.||+|.++. +++.||||++......+.+.+.+|+.+|+.++|||||+++++|.+.+.++|||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~---tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECC---CCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 357788999999999999999988 88999999997655444567999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC--CCCeeecccCccccCCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN--GDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfg~a~~~~~~~ 227 (512)
|||+||+|.++|.. ..+.+++..+..|+.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 234 E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 234 EFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp ECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred eecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 99999999999964 4467999999999999999999999999 9999999999999854 899999999998876543
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc--ccCCCCCHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS--HLEGNFSSEEATVV 302 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 302 (512)
..+||+.|||||++.+..|+.++|||||||++|||++|..||......... ..+... ..........++.+
T Consensus 312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~ 387 (573)
T 3uto_A 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL----RNVKSCDWNMDDSAFSGISEDG 387 (573)
T ss_dssp EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHTTCCCCCSGGGTTSCHHH
T ss_pred ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH----HHHHhCCCCCCcccccCCCHHH
Confidence 457999999999999999999999999999999999999887654222111 111111 11111223456778
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+||.+||+.||.+|||+.++++|-+
T Consensus 388 ~dli~~~L~~dp~~R~t~~e~l~Hpw 413 (573)
T 3uto_A 388 KDFIRKLLLADPNTRMTIHQALEHPW 413 (573)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred HHHHHHHccCChhHCcCHHHHhcCcC
Confidence 99999999999999999999999843
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-48 Score=378.57 Aligned_cols=268 Identities=28% Similarity=0.464 Sum_probs=221.1
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceE
Q 010340 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLI 136 (512)
Q Consensus 57 ~~~~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 136 (512)
+.+.++...+++| .+++.||+|+||.||+|.+. +++.||||++........+.+.+|+.+++.++||||++++
T Consensus 29 ~~~~~~~~~~~~y---~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 101 (321)
T 2qkw_B 29 VPLVDLEEATNNF---DHKFLIGHGVFGKVYKGVLR----DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLI 101 (321)
T ss_dssp -CCSCCCCCCCCC---SCCCCSCBCSSSEEEEEECT----TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEE
T ss_pred ecHHHHHHHHhcc---CccceeecCCCeeEEEEEEC----CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 3334444444444 46778899999999999975 5778999998876555567899999999999999999999
Q ss_pred EEEeeCCeeEEEEEccCCCCHHhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCee
Q 010340 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214 (512)
Q Consensus 137 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 214 (512)
+++.+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||
T Consensus 102 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl 180 (321)
T 2qkw_B 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKI 180 (321)
T ss_dssp EECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEE
T ss_pred EEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEE
Confidence 99999999999999999999999996432 235899999999999999999999999 999999999999999999999
Q ss_pred ecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH-----------HHH
Q 010340 215 SCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL-----------DMI 277 (512)
Q Consensus 215 ~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-----------~~~ 277 (512)
+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||..... ...
T Consensus 181 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 260 (321)
T 2qkw_B 181 TDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260 (321)
T ss_dssp CCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHH
T ss_pred eecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcc
Confidence 999998754321 234579999999999888999999999999999999999988753211 111
Q ss_pred hccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 278 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
........++.......++..+..+.+++.+||+.||++|||+.+++++|+.+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp TTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 1222334444455556778889999999999999999999999999999987653
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=371.75 Aligned_cols=249 Identities=16% Similarity=0.238 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++........+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hceeeeeeeccCCCeEEEEEEECC---CCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 356788899999999999999877 78899999998776666778999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++|+|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 97 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (297)
T ss_dssp ECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred ECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence 99999999999964 46999999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+. .........+...+..+.+|
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~l 249 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIA--TNGTPELQNPEKLSAIFRDF 249 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHH--HHCSCCCSCGGGSCHHHHHH
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHH--hCCCCCCCCccccCHHHHHH
Confidence 34578999999999999999999999999999999999998875432111100 000 01111122345566778999
Q ss_pred HHHhhccCCCCCCChHHHHHHhc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+||+.||++|||+.+++++-.
T Consensus 250 i~~~l~~dp~~Rps~~ell~h~~ 272 (297)
T 3fxz_A 250 LNRCLEMDVEKRGSAKELLQHQF 272 (297)
T ss_dssp HHHHSCSSTTTSCCHHHHTTCGG
T ss_pred HHHHccCChhHCcCHHHHhhChh
Confidence 99999999999999999998754
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-47 Score=374.91 Aligned_cols=247 Identities=19% Similarity=0.228 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCcc---CCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
.++.+++.||+|+||.||+|.... +++.||||++++. .......+.+|+.+|+.++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 81 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence 467788999999999999999987 7889999999754 2234567899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
+||||++||+|.+++. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 82 lv~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EEEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9999999999999997 3457999999999999999999999999 99999999999999999999999999975322
Q ss_pred ---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 ---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ...++...++.+
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~s~~~ 232 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILME--EIRFPRTLSPEA 232 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCTTSCHHH
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHH
Confidence 23567899999999999999999999999999999999999887643221111 111111 123445566778
Q ss_pred HHHHHHhhccCCCCCC-----ChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rp-----s~~~vl~~L~ 328 (512)
.+||.+||+.||.+|| ++.++++|-.
T Consensus 233 ~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 233 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred HHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 9999999999999999 8999998744
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-48 Score=375.08 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=210.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
++.+.+.||+|+||.||+|.+.. +++.||+|++........+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~---~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRE---TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HeeccceecCCCCEEEEEEEECC---CCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 56678889999999999999987 788999999865443345679999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC---
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--- 227 (512)
|+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 88 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 88 YIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999975 3567999999999999999999999999 9999999999999999999999999987643221
Q ss_pred ---------------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-ccchhhhcccccC
Q 010340 228 ---------------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-GKNILHLMDSHLE 291 (512)
Q Consensus 228 ---------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-~~~~~~~~~~~~~ 291 (512)
...||+.|+|||++.+..++.++|||||||++|||++|..|+......... ..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--- 242 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR--- 242 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH---
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc---
Confidence 346899999999999999999999999999999999999776542111110 1111111111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..+..+++.+.+|+.+||+.||++|||+.++++.|+.+..
T Consensus 243 -~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 243 -YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp -TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 2234445668899999999999999999999999998763
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-47 Score=372.73 Aligned_cols=271 Identities=30% Similarity=0.486 Sum_probs=225.2
Q ss_pred cccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCC
Q 010340 53 AFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKR 131 (512)
Q Consensus 53 ~~~~~~~~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~n 131 (512)
....|++.++...+++|. +++.||+|+||.||+|.+. +++.||||++....... ...+.+|+.+++.++|||
T Consensus 16 ~~~~~~~~~~~~~~~~y~---~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~ 88 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFS---NKNILGRGGFGKVYKGRLA----DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 88 (326)
T ss_dssp CCEECCTHHHHTTTTSSC---STTEEECCSSSEEEEECCS----SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTT
T ss_pred ccceecHHHHHHHhhccc---cceeEecCCCcEEEEEEec----CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCC
Confidence 456789999988887776 5667799999999999865 57789999998654332 347999999999999999
Q ss_pred ccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcC---CCccccccCccceee
Q 010340 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSE---GRPLYHDLNAYRVLF 206 (512)
Q Consensus 132 iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~---~~iiH~Dlkp~Nill 206 (512)
|+++++++.+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. + |+||||||+|||+
T Consensus 89 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~ 167 (326)
T 3uim_A 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILL 167 (326)
T ss_dssp BCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEE
T ss_pred ccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEE
Confidence 9999999999999999999999999999997532 33599999999999999999999999 8 9999999999999
Q ss_pred cCCCCCeeecccCccccCCC-----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHH------
Q 010340 207 DENGDPRLSCFGLMKNSRDG-----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD------ 275 (512)
Q Consensus 207 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~------ 275 (512)
+.++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||......
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 247 (326)
T 3uim_A 168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247 (326)
T ss_dssp CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSB
T ss_pred CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchh
Confidence 99999999999999865432 2345899999999998888999999999999999999999887532111
Q ss_pred -------HHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 276 -------MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 276 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.........+.+.......+...+..+.+++.+||+.||.+|||+.+++++|+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 11122334444445556677888999999999999999999999999999998643
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=383.49 Aligned_cols=315 Identities=21% Similarity=0.219 Sum_probs=204.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+.+.+.||+|+||.||+|.+.....++..||||+++..... ..+.|.+|+.++++++||||+++++++.+.+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 455677889999999999998754446788999999764322 2357999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 126 e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 126 EYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp ECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred eCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999999964 4457999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
...+++.|+|||++.+..++.++|||||||++|||++ |+.|+....... +...+........+..++..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~ 278 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-----VIKAVDEGYRLPPPMDCPAA 278 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-----HHHHHHTTEECCCCTTCBHH
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCccccHH
Confidence 1234678999999998899999999999999999998 887765432111 11222222223344556677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCcccccchhHHHHHHHhcc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTH 381 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~ 381 (512)
+.+|+.+||+.||.+||++.++++.|+.+...+..........+ .+.......+..+...-....+|....-+.+
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 353 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAA-----RPSNLLLDQSNVDITTFRTTGDWLNGVWTAH 353 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGGGGGSBCCC---------CCCEEC-----------------------
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCccccccccCCCC-----CCcccccCCCCccccCCCCHHHHHHhccchH
Confidence 99999999999999999999999999988654322211111000 0000000011111111223456666667777
Q ss_pred ccCCccccccchhhHH
Q 010340 382 YKDDEGTNELSFQEWT 397 (512)
Q Consensus 382 ~~d~~~~~~~~~~~~~ 397 (512)
+++.+..++++..+.+
T Consensus 354 ~~~~~~~~~~~~~~~~ 369 (373)
T 2qol_A 354 CKEIFTGVEYSSCDTI 369 (373)
T ss_dssp ----------------
T ss_pred HHHHHHhcCCCcHHHH
Confidence 7777776666555433
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=374.42 Aligned_cols=249 Identities=18% Similarity=0.240 Sum_probs=209.3
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
.+..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+++|+.++||||+++++++...+..
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 89 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHIL---TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL 89 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEE
Confidence 34567889999999999999999977 78899999997654322 35688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++|+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 90 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 90 YLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp EEEECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EEEEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 999999999999999973 456999999999999999999999999 99999999999999999999999999976543
Q ss_pred C---CccccCcccCCcccccCCCCC-CCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 226 G---KSYSTNLAYTPPEYLRNGRVT-PESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
. ....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.......... .+... ....+...++.
T Consensus 167 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~ 240 (328)
T 3fe3_A 167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE----RVLRG--KYRIPFYMSTD 240 (328)
T ss_dssp SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCHH
T ss_pred CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CCCCCCCCCHH
Confidence 3 345789999999999888765 78999999999999999998876542221111 11111 11234455677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+|+.+||..||.+|||+.+++++-+
T Consensus 241 ~~~li~~~L~~dP~~R~t~~eil~h~~ 267 (328)
T 3fe3_A 241 CENLLKRFLVLNPIKRGTLEQIMKDRW 267 (328)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence 889999999999999999999998744
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=374.28 Aligned_cols=258 Identities=22% Similarity=0.281 Sum_probs=212.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..+.+++.||+|+||.||+|.+..+...+..||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 3566788999999999999999865546677999999864322 235799999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 129 TEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred eeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 999999999999964 4467999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ....+........+..++.
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 281 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD-----VISSVEEGYRLPAPMGCPH 281 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-----HHHHHHTTCCCCCCTTCCH
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHHcCCCCCCCCCcCH
Confidence 2234678999999998899999999999999999999 887765432211 1111222223344556677
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
.+.+|+.+||..||.+|||+.++++.|+.+...+
T Consensus 282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 8999999999999999999999999999887543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=367.33 Aligned_cols=267 Identities=19% Similarity=0.228 Sum_probs=219.7
Q ss_pred cccCHHHHHHHhcCCCc-------ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC
Q 010340 55 AEFSLADLRAATNNFSS-------DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL 127 (512)
Q Consensus 55 ~~~~~~~~~~~~~~f~~-------~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l 127 (512)
..|+.+++..+++.... +.....||+|+||.||+|.+.. +++.||||++........+.+.+|+.+++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKH---SGRQVAVKMMDLRKQQRRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCSHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECC---CCcEEEEEEEeccchhHHHHHHHHHHHHHhC
Confidence 56899999999876432 3345578999999999999987 7889999999876666677899999999999
Q ss_pred CCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec
Q 010340 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 128 ~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~ 207 (512)
+||||+++++++...+..++||||+++++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~ 175 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLT 175 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEC
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEC
Confidence 99999999999999999999999999999999984 457999999999999999999999999 99999999999999
Q ss_pred CCCCCeeecccCccccCCC----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchh
Q 010340 208 ENGDPRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~ 283 (512)
.++.+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.
T Consensus 176 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~~~~ 254 (321)
T 2c30_A 176 LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-KRLR 254 (321)
T ss_dssp TTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHH
T ss_pred CCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHh
Confidence 9999999999998765432 3457899999999999889999999999999999999999887543211110 0111
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
....+ ........++.+.+++.+||+.||++|||+.+++++..-..
T Consensus 255 ~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 300 (321)
T 2c30_A 255 DSPPP--KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300 (321)
T ss_dssp HSSCC--CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred cCCCC--CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence 11110 11122345667889999999999999999999999865543
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-47 Score=379.37 Aligned_cols=251 Identities=18% Similarity=0.228 Sum_probs=206.4
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcC-CCCCccceEEEEeeCCe
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 144 (512)
+.++.+++.||+|+||.||+|+++. +++.||||++++..... .+.+.+|..++.++ +|||||++++++.+.+.
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~---~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKK---TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 4567789999999999999999987 88999999998654332 34688999999887 89999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
++|||||++||+|..++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 128 ~~lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999999973 467999999999999999999999999 9999999999999999999999999997532
Q ss_pred ----CCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc-c---h-hhhcccccCCCCC
Q 010340 225 ----DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK-N---I-LHLMDSHLEGNFS 295 (512)
Q Consensus 225 ----~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-~---~-~~~~~~~~~~~~~ 295 (512)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||........... . + ..+.. ....++
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p 282 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIP 282 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCC
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCC
Confidence 22356799999999999999999999999999999999999988753211100000 0 1 11111 122345
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCh------HHHHHHh
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNT------KDLVSTL 327 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~------~~vl~~L 327 (512)
...+..+.+||.+||+.||.+||++ .++++|-
T Consensus 283 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp 320 (396)
T 4dc2_A 283 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320 (396)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence 5667789999999999999999986 5676663
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-47 Score=368.54 Aligned_cols=257 Identities=19% Similarity=0.262 Sum_probs=204.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
.+.++.+++.||+|+||.||+|.+ +++.||||++....... .+.+.+|+.++++++||||+++++++.+.+..
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-----HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-----CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 345677889999999999999987 46779999998654332 24689999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeecCCCCCeeecccCcccc
Q 010340 146 LLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999999997421 123999999999999999999999986 4999999999999999999999999998754
Q ss_pred CCC----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 224 RDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 224 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||......... ..+.........+...+
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~ 265 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV----AAVGFKCKRLEIPRNLN 265 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH----HHHHHSCCCCCCCTTSC
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhcCCCCCCCccCC
Confidence 332 3457899999999999999999999999999999999999886543211111 11111122234455667
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+.+.+||.+||+.||.+|||+.++++.|+.+.+.
T Consensus 266 ~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 266 PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999988754
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=375.99 Aligned_cols=256 Identities=20% Similarity=0.305 Sum_probs=210.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcC----CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQD----GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 143 (512)
..+.+++.||+|+||.||+|.+.. ...++..||||+++..... ..+.+.+|+.+|+.+ +||||++++++|.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 356678889999999999999753 1225678999999765321 235789999999999 8999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 209 (512)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCC
Confidence 9999999999999999997532 235899999999999999999999999 9999999999999999
Q ss_pred CCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccch
Q 010340 210 GDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNI 282 (512)
Q Consensus 210 ~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 282 (512)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.|+..... ..+
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-----~~~ 314 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----EEL 314 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHH
Confidence 99999999999865432 23346788999999999999999999999999999999 8776653211 112
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 283 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
...+........+..++..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2222222333455667778999999999999999999999999998765
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=367.49 Aligned_cols=248 Identities=21% Similarity=0.248 Sum_probs=210.1
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
..++.+++.||+|+||.||++.... +++.||||++.+.. ....+.+.+|+.+++.++||||+++++++.+....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 81 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI 81 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEE
Confidence 3467788999999999999999987 78899999997542 23456788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||++||+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 82 ~lv~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 82 FMIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp EEEECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999999997 3567999999999999999999999999 99999999999999999999999999987554
Q ss_pred C-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 226 G-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 226 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++...+..+.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~ 232 (318)
T 1fot_A 159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT----YEKILNA--ELRFPPFFNEDVKD 232 (318)
T ss_dssp CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHH
T ss_pred ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHHHHH
Confidence 3 356799999999999999999999999999999999999988754321111 1111111 12344556677899
Q ss_pred HHHHhhccCCCCCC-----ChHHHHHHhc
Q 010340 305 LASRCLQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 305 li~~cl~~~p~~Rp-----s~~~vl~~L~ 328 (512)
++.+||..||.+|| ++.++++|-.
T Consensus 233 li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 233 LLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp HHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred HHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 99999999999999 8889888743
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-47 Score=374.80 Aligned_cols=246 Identities=17% Similarity=0.176 Sum_probs=206.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------ChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+|+.++||||+++++++.+...
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred ceEEeeEEeeCcCEEEEEEEECC---CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 36678889999999999999987 7889999999865432 24679999999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC----CCeeecccCc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLM 220 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg~a 220 (512)
.++||||++||+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 90 ~~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 90 VVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999999996 4567999999999999999999999999 99999999999998776 7999999999
Q ss_pred cccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC--
Q 010340 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295 (512)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (512)
...... ....||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+... ...++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~----~~i~~~--~~~~~~~ 240 (361)
T 2yab_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANITAV--SYDFDEE 240 (361)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHTT--CCCCCHH
T ss_pred eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhc--CCCCCch
Confidence 875543 3567899999999999889999999999999999999999887653221111 111110 11122
Q ss_pred --HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 296 --SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 296 --~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+..+.+||.+||..||.+|||+.++++|-+
T Consensus 241 ~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 241 FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence 234567889999999999999999999998743
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=362.93 Aligned_cols=256 Identities=17% Similarity=0.218 Sum_probs=207.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++..++||||+++++++.+.+..++
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTI---LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECC---CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 57788999999999999999887 78889999986554433 3578999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||++|++|.+++.. .+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 v~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999999973 457999999999999999999999999 999999999999999999999999999765432
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||............+..... ......+...+..+
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 244 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP-NVTTDVRKDIPQSL 244 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC-CHHHHSCTTSCHHH
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC-CcchhcccCCCHHH
Confidence 2356899999999999989999999999999999999999887643222111111111000 00111223455678
Q ss_pred HHHHHHhhccCCCCCC-ChHHHHHHhccccCC
Q 010340 303 FDLASRCLQYEPRERP-NTKDLVSTLAPLQNR 333 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rp-s~~~vl~~L~~~~~~ 333 (512)
.+++.+||+.||.+|| ++.++.+.|..+...
T Consensus 245 ~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 245 SNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred HHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 8999999999999998 899999999887644
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=374.93 Aligned_cols=247 Identities=19% Similarity=0.224 Sum_probs=205.0
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCe
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 144 (512)
+.++.+++.||+|+||.||+|+++. +++.||||++.+.. ....+.+.+|+.++..+ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 98 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKE---TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR 98 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcC---CCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence 4567789999999999999999987 78899999997542 22346688999999988 79999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.+|||||++||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 99 ~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 99 LFFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999999999973 467999999999999999999999999 9999999999999999999999999998533
Q ss_pred C----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 225 D----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 225 ~----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ...++...+.
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~~~ 249 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF----EAILND--EVVYPTWLHE 249 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCTTSCH
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCH
Confidence 2 23567999999999999888999999999999999999999887654222111 111111 1233445667
Q ss_pred HHHHHHHHhhccCCCCCCCh------HHHHHHh
Q 010340 301 VVFDLASRCLQYEPRERPNT------KDLVSTL 327 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~------~~vl~~L 327 (512)
.+.+||.+||..||.+||++ .++++|-
T Consensus 250 ~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 250 DATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp HHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred HHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 78999999999999999998 7788764
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=370.29 Aligned_cols=248 Identities=16% Similarity=0.145 Sum_probs=210.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
..++.+++.||+|+||.||+|.+.. +++.||||++.+.. ....+.+.+|+.+|+.++||||+++++++.+.+..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 116 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL 116 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECC---CCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 3567788999999999999999987 78899999997542 23456789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+|||||++||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 117 ~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 117 YMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EEEEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccC
Confidence 999999999999999974 356999999999999999999999999 99999999999999999999999999987654
Q ss_pred C-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 226 G-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 226 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++...+..+.+
T Consensus 194 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~ 267 (350)
T 1rdq_E 194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSG--KVRFPSHFSSDLKD 267 (350)
T ss_dssp CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTCCHHHHH
T ss_pred CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHH
Confidence 3 356799999999999998999999999999999999999988764322111 1111111 12344556677899
Q ss_pred HHHHhhccCCCCCCC-----hHHHHHHhc
Q 010340 305 LASRCLQYEPRERPN-----TKDLVSTLA 328 (512)
Q Consensus 305 li~~cl~~~p~~Rps-----~~~vl~~L~ 328 (512)
||.+||+.||.+||+ +.++++|-.
T Consensus 268 li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp HHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred HHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 999999999999998 888887744
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=368.19 Aligned_cols=252 Identities=19% Similarity=0.156 Sum_probs=205.1
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+..|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECC---CCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 4567789999999999999999987 7889999999754432 24678999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||||+++|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 83 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 83 FLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp EEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999999999996 4567999999999999999999999999 99999999999999999999999999975432
Q ss_pred ----CCccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 226 ----GKSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
.....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........ ..................+.
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 236 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPWKKIDS 236 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH---HHHHHHTTCTTSTTGGGSCH
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH---HHHHHhcccccCCccccCCH
Confidence 134578999999999987775 7789999999999999999988754211100 01111111111111234566
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+.+|+.+||+.||.+|||+.+++++-+-
T Consensus 237 ~~~~li~~~L~~dP~~R~t~~eil~h~~~ 265 (323)
T 3tki_A 237 APLALLHKILVENPSARITIPDIKKDRWY 265 (323)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred HHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence 78899999999999999999999988553
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=372.31 Aligned_cols=256 Identities=18% Similarity=0.133 Sum_probs=199.9
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+...|.+++.||+|+||.||++.+.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKL---TKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETT---TCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECC---CCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 34568889999999999999999987 788999999976543 34678999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC--CeeecccCccccCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD--PRLSCFGLMKNSRD 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfg~a~~~~~ 225 (512)
||||+++|+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 94 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 94 IMEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 9999999999999963 456999999999999999999999999 999999999999987665 99999999874332
Q ss_pred ---CCccccCcccCCcccccCCCCCCC-CcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 226 ---GKSYSTNLAYTPPEYLRNGRVTPE-SVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~-~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||............+..+.............++.
T Consensus 171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 250 (361)
T 3uc3_A 171 HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPE 250 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHH
T ss_pred cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHH
Confidence 235678999999999988887665 8999999999999999988754311100011111111111111112234567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+.+||.+||+.||.+|||+.++++|-+-.
T Consensus 251 ~~~li~~~L~~dP~~Rps~~ell~hp~f~ 279 (361)
T 3uc3_A 251 CCHLISRIFVADPATRISIPEIKTHSWFL 279 (361)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred HHHHHHHHccCChhHCcCHHHHHhCcchh
Confidence 88999999999999999999999986543
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=357.21 Aligned_cols=251 Identities=24% Similarity=0.327 Sum_probs=209.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+.+++.||+|+||.||+|.+. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET----TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEec----CCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 46778899999999999999987 45679999998654 34578999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 85 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp ECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred EeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999999964 4557999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
....+|+.|+|||++.+..++.++||||||+++|+|++ |+.|+........ ...+........+...+..+.
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 237 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLYKPRLASTHVY 237 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HHHHHTTCCCCCCTTSCHHHH
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH-----HHHHhcCccCCCCCcCCHHHH
Confidence 23456778999999998899999999999999999999 7766543321111 111111122233444567789
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
+++.+||+.||.+|||+.+++++|+.+..
T Consensus 238 ~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 238 QIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999988753
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=380.19 Aligned_cols=252 Identities=24% Similarity=0.370 Sum_probs=209.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.++.+++.||+|+||.||+|.+.. +++.||||+++...... .+.|.+|+++|+.++||||+++++++.+.+..+||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRA---DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEec---CCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 356678889999999999999987 77889999987543211 24688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 191 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 191 MELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp EECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999974 3456899999999999999999999999 9999999999999999999999999997644321
Q ss_pred -----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
...+++.|+|||++.++.++.++|||||||++|||+| |..|+...... .....+........+..++..
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 343 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----QTREFVEKGGRLPCPELCPDA 343 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----HHHHHHHTTCCCCCCTTCCHH
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHH
Confidence 1234678999999998889999999999999999998 77766543211 112222222333445556778
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+.+|+.+||+.||++|||+.++++.|+.+.
T Consensus 344 l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 344 VFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 999999999999999999999999998765
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=371.80 Aligned_cols=249 Identities=19% Similarity=0.227 Sum_probs=206.6
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+..+.+++.||+|+||.||++.+.. +++.||||++.... ......+.+|+.+|+.++|||||+++++|.+.+..
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 90 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKND---TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM 90 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567889999999999999999987 78899999987542 23456789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||++||+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||+++....
T Consensus 91 ~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 91 FMVVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp EEEECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999999997 4567999999999999999999999999 99999999999999999999999999986543
Q ss_pred C---CccccCcccCCcccccC---CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 226 G---KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
. ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......+. .....++...+
T Consensus 168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~~~~~~-~~~~~~p~~~s 244 (384)
T 4fr4_A 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEIVHTFE-TTVVTYPSAWS 244 (384)
T ss_dssp TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHHHHHHH-HCCCCCCTTSC
T ss_pred CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHHHHHHh-hcccCCCCcCC
Confidence 2 35679999999999964 4589999999999999999999988753211000 00001110 11223455566
Q ss_pred HHHHHHHHHhhccCCCCCCC-hHHHHHH
Q 010340 300 TVVFDLASRCLQYEPRERPN-TKDLVST 326 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps-~~~vl~~ 326 (512)
..+.+||.+||+.||.+||+ +.+++++
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 78999999999999999998 6777664
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=386.45 Aligned_cols=253 Identities=20% Similarity=0.336 Sum_probs=215.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.++.+++.||+|+||.||+|.+.. ++..||||++.... ...+.|.+|+.+|++++|||||+++++|.+....+|||
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGG---GTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHceeeeEecCCCCeEEEEEEEcC---CCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 346678889999999999999986 68899999998654 34678999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999998655677999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...+++.|+|||++.+..++.++|||||||++|||+| |..|+.... ...+...+........+..++..+.
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~ 449 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKVY 449 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 2345678999999998899999999999999999999 776654321 1122233333334445666778899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
+||.+||+.||.+|||+.+|++.|+.+..
T Consensus 450 ~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 450 ELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998754
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-47 Score=365.92 Aligned_cols=255 Identities=23% Similarity=0.337 Sum_probs=209.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCC----CceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGND----NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
++.+++.||+|+||.||+|.+..... .+..||+|++........+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (289)
T 4fvq_A 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI 88 (289)
T ss_dssp GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCE
T ss_pred HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCE
Confidence 56678889999999999999876211 12579999998765555678999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC--------Ceeeccc
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD--------PRLSCFG 218 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Dfg 218 (512)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||
T Consensus 89 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 89 LVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp EEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred EEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 99999999999999975 3445999999999999999999999999 999999999999998877 9999999
Q ss_pred CccccCCCCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 219 LMKNSRDGKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 219 ~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
++..........+|+.|+|||++.+ ..++.++|||||||++|||++|..|++......... .... .....+..
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~----~~~~--~~~~~~~~ 240 (289)
T 4fvq_A 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL----QFYE--DRHQLPAP 240 (289)
T ss_dssp SCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH----HHHH--TTCCCCCC
T ss_pred ccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH----HHhh--ccCCCCCC
Confidence 9987766666778999999999987 668999999999999999999776655432111110 1110 11122223
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.+..+.+|+.+||+.||.+|||+.+++++|+.+..+
T Consensus 241 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 241 KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 345678999999999999999999999999998754
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-46 Score=359.28 Aligned_cols=253 Identities=19% Similarity=0.230 Sum_probs=203.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|+.++++++||||+++++++.+.+..++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 78 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL 78 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECC---CCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEE
Confidence 467788999999999999999987 78899999997654332 3678899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||||+++ +|.+.+.. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 79 v~e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 79 VFEFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EEECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred EEecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence 9999976 66666643 4567999999999999999999999999 99999999999999999999999999976542
Q ss_pred --CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc--------------
Q 010340 226 --GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS-------------- 288 (512)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-------------- 288 (512)
.....+|+.|+|||++.+.. ++.++|||||||++|+|++|+.|++...........+......
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 23456799999999998766 7999999999999999999988865332111100111000000
Q ss_pred ----------ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 289 ----------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 289 ----------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.......+..+..+.+|+.+||+.||++|||+.++++|-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 285 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence 0001112345677889999999999999999999998743
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-47 Score=376.85 Aligned_cols=258 Identities=22% Similarity=0.330 Sum_probs=209.0
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+||.||+|.+.. ...+++.||||++...... ....+.+|+.++++++||||+++++++.+....++
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 151 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence 46688899999999999999653 1226788999999754322 23468899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC---CCeeecccC
Q 010340 148 VAEYMPNDTLAKHLFHWE-----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGL 219 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg~ 219 (512)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 999999999999997532 245899999999999999999999999 99999999999998555 599999999
Q ss_pred cccc------CCCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCC
Q 010340 220 MKNS------RDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 220 a~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||....... +...+......
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~-----~~~~i~~~~~~ 305 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-----VLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----HHHHHHTTCCC
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCC
Confidence 8743 22334567899999999998899999999999999999998 877665432211 11222222223
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
..+..++..+.+|+.+||+.||.+|||+.+|+++|+.+...+
T Consensus 306 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 306 DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 344556677899999999999999999999999999876543
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=366.31 Aligned_cols=253 Identities=15% Similarity=0.145 Sum_probs=205.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+.+|+.+++.+ +||||+++++++......++||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLY---TNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETT---TTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEeeccCCceEEEEEECC---CCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 46688899999999999999877 88999999987543 235799999999999 9999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC-----CeeecccCccccC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-----PRLSCFGLMKNSR 224 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfg~a~~~~ 224 (512)
||+ +++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 85 ELL-GPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred EeC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 999 9999999975 3568999999999999999999999999 999999999999998887 9999999998643
Q ss_pred CC-----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 225 DG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 225 ~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~-~~~~~i~~~~~~~~ 240 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK-ERYQKIGDTKRATP 240 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH-HHHHHHHHHHHHSC
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH-HHHHHHHhhhccCC
Confidence 22 3457899999999999999999999999999999999999887542100000 00000000000000
Q ss_pred ---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 294 ---FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 294 ---~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.....+ .+.+++..||+.||.+||++.+|++.|+.+...
T Consensus 241 ~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 241 IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 001123 789999999999999999999999999876533
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=378.52 Aligned_cols=251 Identities=20% Similarity=0.167 Sum_probs=207.4
Q ss_pred cCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCC
Q 010340 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (512)
Q Consensus 67 ~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 143 (512)
-...++.+++.||+|+||.||+|.++. +++.||||++.+.. ....+.+.+|+.++..++|||||+++++|.+..
T Consensus 66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~---~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 66 MKAEDYEVVKVIGRGAFGEVQLVRHKS---TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred cCccccEEEEEEEcCCCEEEEEEEECC---CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 344567788999999999999999987 78899999987532 223456889999999999999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
.++|||||++||+|.+++.. ..+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 99999999999999999963 46899999999999999999999999 999999999999999999999999999865
Q ss_pred CCC-----CccccCcccCCcccccCCC----CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc--cCC
Q 010340 224 RDG-----KSYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH--LEG 292 (512)
Q Consensus 224 ~~~-----~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 292 (512)
... ...+||+.|+|||++.+.. ++.++|||||||++|||++|+.||......... ..++... +..
T Consensus 219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~----~~i~~~~~~~~~ 294 (410)
T 3v8s_A 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY----SKIMNHKNSLTF 294 (410)
T ss_dssp CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHTHHHHCCC
T ss_pred ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHH----HHHHhccccccC
Confidence 543 2567999999999997655 789999999999999999999887654222111 1111111 111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCC--CCChHHHHHHhc
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLA 328 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~--Rps~~~vl~~L~ 328 (512)
......+..+.+||.+||..+|.+ ||++.+|++|-.
T Consensus 295 p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 295 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 111235567889999999999988 999999999854
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-46 Score=358.89 Aligned_cols=248 Identities=17% Similarity=0.187 Sum_probs=199.6
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--------------------------ChhHHHHHHH
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------------------------DPKQFADEAW 122 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~ 122 (512)
+..|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 88 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNEN---DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA 88 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETT---TTEEEEEEEEECC-------------------------------CHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECC---CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH
Confidence 4567788999999999999999987 7899999999754321 1256899999
Q ss_pred HHhcCCCCCccceEEEEee--CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccC
Q 010340 123 GVGKLRHKRLANLIGYCCD--GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200 (512)
Q Consensus 123 ~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlk 200 (512)
+++.++||||+++++++.+ ....++||||+++++|.+++ ....+++..++.++.||+.||.|||+++ |+|||||
T Consensus 89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlk 164 (298)
T 2zv2_A 89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIK 164 (298)
T ss_dssp HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCC
T ss_pred HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCC
Confidence 9999999999999999987 56899999999999998876 4567999999999999999999999999 9999999
Q ss_pred ccceeecCCCCCeeecccCccccCCC----CccccCcccCCcccccCCC---CCCCCcEEehHHHHHHHHhCCCCCChhh
Q 010340 201 AYRVLFDENGDPRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHA 273 (512)
Q Consensus 201 p~Nill~~~~~~kl~Dfg~a~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~ 273 (512)
|+|||++.++.+||+|||+++..... ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999999865443 2457899999999997655 4778999999999999999998875432
Q ss_pred HHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 274 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
...... .+.............++.+.+||.+||+.||++|||+.++++|-
T Consensus 245 ~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp 294 (298)
T 2zv2_A 245 IMCLHS----KIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294 (298)
T ss_dssp HHHHHH----HHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCH
T ss_pred HHHHHH----HHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCc
Confidence 211111 11111111111234556788999999999999999999998763
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=369.51 Aligned_cols=257 Identities=19% Similarity=0.296 Sum_probs=205.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.++.+++.||+|+||.||+|.+..+.. ....||+|.+..... .....+.+|+.+++.++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 357788899999999999999876211 123488888764432 23457889999999999999999999986 456899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999964 3457999999999999999999999999 999999999999999999999999999865432
Q ss_pred -----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 227 -----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
....+|+.|+|||++.+..++.++|||||||++|+|+| |+.||..... ..+...+........+..++.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----AEVPDLLEKGERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----THHHHHHHTTCBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCCCCcCcH
Confidence 23456789999999998899999999999999999999 8877654211 111222222222333444556
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
.+.+++.+||+.||.+|||+.+++++|+.+...+
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 6889999999999999999999999999887543
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=364.80 Aligned_cols=261 Identities=19% Similarity=0.312 Sum_probs=208.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcC-CCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee--CCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 146 (512)
..+.+++.||+|+||.||+|.+.. ...+++.||||++........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 356788999999999999998532 112788999999986543334679999999999999999999999965 35689
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 90 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 99999999999999975 3446999999999999999999999999 999999999999999999999999999865432
Q ss_pred C-------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh---c--------cchhhhccc
Q 010340 227 K-------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR---G--------KNILHLMDS 288 (512)
Q Consensus 227 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~--------~~~~~~~~~ 288 (512)
. ...++..|+|||++.+..++.++|||||||++|||+||..|+......... . ......+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 1 234567799999999899999999999999999999999776543222110 0 011122222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
......+..+++.+.+|+.+||+.||++|||+.++++.|+.+..
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 23334456677889999999999999999999999999988754
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-46 Score=364.64 Aligned_cols=246 Identities=17% Similarity=0.148 Sum_probs=205.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------ChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+|+.++||||+++++++.+...
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred ceEeceEEeeCCCeEEEEEEECC---CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 35678889999999999999987 7889999999765432 24679999999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC----CCeeecccCc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLM 220 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg~a 220 (512)
.++||||+++|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 89 VILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999996 4567999999999999999999999999 99999999999998877 7999999999
Q ss_pred cccCC---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC--
Q 010340 221 KNSRD---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295 (512)
Q Consensus 221 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (512)
+.... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+.. ....++
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~~~~--~~~~~~~~ 239 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANVSA--VNYEFEDE 239 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHH--TCCCCCHH
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH----HHHHh--cCCCcCcc
Confidence 86543 23457899999999999889999999999999999999999887543221111 00000 011112
Q ss_pred --HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 296 --SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 296 --~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+..+.+||.+||..||.+|||+.+++++-.
T Consensus 240 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 240 YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 234567889999999999999999999999743
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=369.04 Aligned_cols=247 Identities=18% Similarity=0.244 Sum_probs=206.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcC-CCCCccceEEEEeeCC
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 143 (512)
...++.+++.||+|+||.||+|+++. +++.||||++++.. ....+.+..|..++..+ +||||+++++++.+.+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKK---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 34567788899999999999999987 88999999997642 23456788999999887 9999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
..++||||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999999973 457999999999999999999999999 999999999999999999999999999754
Q ss_pred CC----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 224 RD----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 224 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.. ....++...+
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----~~i~~--~~~~~p~~~s 242 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF----HSIRM--DNPFYPRWLE 242 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHH--CCCCCCTTSC
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH----HHHHh--CCCCCCcccC
Confidence 22 23567899999999999989999999999999999999999887643221111 11111 1123444566
Q ss_pred HHHHHHHHHhhccCCCCCCChH-HHHHH
Q 010340 300 TVVFDLASRCLQYEPRERPNTK-DLVST 326 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~-~vl~~ 326 (512)
..+.+||.+||..||.+||++. ++++|
T Consensus 243 ~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 243 KEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 7789999999999999999997 66554
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=365.53 Aligned_cols=248 Identities=16% Similarity=0.198 Sum_probs=207.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..|.+++.||+|+||.||+|.+.. +++.||+|++.... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETS---SKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hceEeeeEEecCCCeEEEEEEECC---CCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 467788899999999999999987 78999999987542 23456889999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC--CCCCeeecccCccccCCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE--NGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~ 227 (512)
||++||+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 81 EFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred EeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 99999999999963 3457999999999999999999999999 999999999999986 7899999999998765443
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC----HHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS----SEEAT 300 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 300 (512)
...||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+..... .++ ...+.
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~--~~~~~~~~~~s~ 232 (321)
T 1tki_A 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII----ENIMNAEY--TFDEEAFKEISI 232 (321)
T ss_dssp EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHTCC--CCCHHHHTTSCH
T ss_pred ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH----HHHHcCCC--CCChhhhccCCH
Confidence 356899999999999888999999999999999999999887643222111 11111111 112 13456
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+.+|+.+||..||.+|||+.+++++-+-
T Consensus 233 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~~ 261 (321)
T 1tki_A 233 EAMDFVDRLLVKERKSRMTASEALQHPWL 261 (321)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcChhh
Confidence 78999999999999999999999998653
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-46 Score=377.62 Aligned_cols=250 Identities=16% Similarity=0.149 Sum_probs=205.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|.+++.||+|+||.||+|.+.. +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~---~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVL---AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETT---TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred CeEEEEEeccCCCeEEEEEEECC---CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 46688899999999999999987 88999999997654322 35689999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec---CCCCCeeecccCccccCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~ 225 (512)
|||++||+|.+.+. ....+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++.....
T Consensus 89 ~E~~~gg~L~~~i~--~~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999999999997 4567999999999999999999999999 99999999999998 567899999999976554
Q ss_pred C----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 226 G----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
. ....||+.|+|||++.+..++.++|||||||++|+|++|..||........... +... ............++.
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~-i~~~-~~~~~~~~~~~~s~~ 243 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ-IKAG-AYDFPSPEWDTVTPE 243 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHT-CCCCCTTTTTTSCHH
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHH-HHhC-CCCCCccccccCCHH
Confidence 3 245789999999999988999999999999999999999988765422211111 0000 001111112345677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+||.+||+.||.+|||+.+++++-.
T Consensus 244 ~~~li~~~L~~dP~~Rpta~e~L~hp~ 270 (444)
T 3soa_A 244 AKDLINKMLTINPSKRITAAEALKHPW 270 (444)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 899999999999999999999999843
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-46 Score=380.45 Aligned_cols=251 Identities=24% Similarity=0.358 Sum_probs=210.0
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCC-eeEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-ERLL 147 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~l 147 (512)
...+.+++.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.+|++++||||+++++++.+.. ..+|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-----~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-----TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-----CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 456678889999999999999884 5689999998654 4578999999999999999999999987765 7899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++|+|.+++.......+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 999999999999998655556899999999999999999999999 999999999999999999999999999864432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....+++.|+|||++.+..++.++|||||||++|||+| |+.|+.... ...+...+........+..+++.+.+|
T Consensus 344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~p~~~~~~l~~l 418 (450)
T 1k9a_A 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVEKGYKMDAPDGCPPAVYDV 418 (450)
T ss_dssp ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC-----TTTHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence 23456889999999999999999999999999999998 887765321 111222222233344566677889999
Q ss_pred HHHhhccCCCCCCChHHHHHHhccccC
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
|.+||+.||.+|||+.++++.|+.+..
T Consensus 419 i~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 419 MKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999988753
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=355.24 Aligned_cols=271 Identities=31% Similarity=0.503 Sum_probs=222.3
Q ss_pred cccccCHHHHHHHhcCCCcccc---cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----CChhHHHHHHHHHh
Q 010340 53 AFAEFSLADLRAATNNFSSDFI---VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVG 125 (512)
Q Consensus 53 ~~~~~~~~~~~~~~~~f~~~~~---i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~ 125 (512)
....|++.++..++++|+...+ .+.||+|+||.||+|.. +++.||||++..... ...+.+.+|+.+++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~ 85 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMA 85 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-----SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-----CCceEEEEEEecccCcchHHHHHHHHHHHHHHH
Confidence 4578999999999999987532 25689999999999986 456799999875432 12457999999999
Q ss_pred cCCCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccce
Q 010340 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW-ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204 (512)
Q Consensus 126 ~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Ni 204 (512)
.++||||+++++++.+.+..++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||
T Consensus 86 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Ni 164 (307)
T 2nru_A 86 KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANI 164 (307)
T ss_dssp HCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGE
T ss_pred hcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHE
Confidence 999999999999999999999999999999999999643 2456999999999999999999999999 99999999999
Q ss_pred eecCCCCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH--
Q 010340 205 LFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-- 276 (512)
Q Consensus 205 ll~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-- 276 (512)
|++.++.+||+|||++...... ....||+.|+|||++.+ .++.++|||||||++|+|++|..|+.......
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 243 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence 9999999999999998765432 23468999999999864 58999999999999999999998765321100
Q ss_pred ------H--hccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 277 ------I--RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 277 ------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
. ....+...++..+ ...+...+..+.+++.+||+.||.+|||+.+++++|+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 0 0111122222222 3456778888999999999999999999999999998875
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=354.88 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..+.+++.||+|+||.||+|.+. ++..||||++..... ..+.+.+|+.++.+++||||+++++++.+....++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWK----GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hheeeeeeeccCCCceEEEEEec----CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 35678889999999999999886 556799999986543 4577999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 83 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 83 EYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp ECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred EccCCCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 99999999999975 3456999999999999999999999999 9999999999999999999999999997654432
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...+|+.|+|||++.+..++.++||||||+++|+|+| |+.|+........ ...+........+...++.+.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~ 235 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-----VLKVSQGHRLYRPHLASDTIY 235 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----HHHHHTTCCCCCCTTSCHHHH
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-----HHHHHcCCCCCCCCcChHHHH
Confidence 2345677999999998889999999999999999999 8876543221111 111111112223344556788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+++.+||+.||.+|||+.+++++|+.+...
T Consensus 236 ~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 236 QIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 999999999999999999999999998753
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-46 Score=366.98 Aligned_cols=250 Identities=18% Similarity=0.222 Sum_probs=205.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
.++.+++.||+|+||.||+|+++. +++.||||++.+..... .+.+.+|+.++.++ +||||+++++++.+.+..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 85 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKK---TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 85 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hheEEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence 457788899999999999999987 78999999998765443 24588999999988 899999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||++||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 86 FFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 999999999999999973 457999999999999999999999999 99999999999999999999999999975322
Q ss_pred ----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH----hccch-hhhcccccCCCCCH
Q 010340 226 ----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI----RGKNI-LHLMDSHLEGNFSS 296 (512)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~ 296 (512)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....+ ..+.. ....++.
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~ 240 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPR 240 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH--CCCCCCT
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc--CCCCCCC
Confidence 2356789999999999998999999999999999999999988753110000 00000 11111 1223455
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCh------HHHHHHh
Q 010340 297 EEATVVFDLASRCLQYEPRERPNT------KDLVSTL 327 (512)
Q Consensus 297 ~~~~~~~~li~~cl~~~p~~Rps~------~~vl~~L 327 (512)
..+..+.+||.+||+.||.+||++ .++++|-
T Consensus 241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp 277 (345)
T 3a8x_A 241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 277 (345)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSG
T ss_pred CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCC
Confidence 567778999999999999999996 5666653
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-46 Score=367.59 Aligned_cols=247 Identities=18% Similarity=0.217 Sum_probs=207.6
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCe
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 144 (512)
..++.+++.||+|+||.||+|.... +++.||||++.+.. ....+.+.+|..++..+ +||||+++++++.+.+.
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETT---EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 4567789999999999999999987 78999999997642 23456788999999998 89999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.+|||||++||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 96 ~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999999973 456999999999999999999999999 9999999999999999999999999998632
Q ss_pred C----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 225 D----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 225 ~----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++...+.
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~ 246 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEH--NVAYPKSMSK 246 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCH
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCH
Confidence 2 2356789999999999999999999999999999999999988764322111 1111111 1234555677
Q ss_pred HHHHHHHHhhccCCCCCCC-----hHHHHHHh
Q 010340 301 VVFDLASRCLQYEPRERPN-----TKDLVSTL 327 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps-----~~~vl~~L 327 (512)
.+.+||.+||..||.+||+ +.++++|-
T Consensus 247 ~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 247 EAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 8999999999999999995 47777663
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-46 Score=370.72 Aligned_cols=240 Identities=22% Similarity=0.230 Sum_probs=194.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHHHH-HhcCCCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWG-VGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+++.+++.||+|+||.||+|+++. +++.||||++.+.... ....+.+|..+ ++.++||||+++++++.+.+..
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~ 114 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKA---EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL 114 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETT---TCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence 356788999999999999999987 7889999999865432 23456777777 5778999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC-
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR- 224 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~- 224 (512)
+|||||++||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 115 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 115 YFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999999973 457899999999999999999999999 9999999999999999999999999997532
Q ss_pred ---CCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 225 ---DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 225 ---~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||......... ..+... ...++...+..
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~ 265 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY----DNILNK--PLQLKPNITNS 265 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH----HHHHHS--CCCCCSSSCHH
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHhc--ccCCCCCCCHH
Confidence 234567999999999999999999999999999999999999887643222111 111111 11234455677
Q ss_pred HHHHHHHhhccCCCCCCChH
Q 010340 302 VFDLASRCLQYEPRERPNTK 321 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~ 321 (512)
+.+||.+||+.||.+||++.
T Consensus 266 ~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 266 ARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHHHHHTCSSGGGSTTTT
T ss_pred HHHHHHHHcccCHHhCCCCC
Confidence 89999999999999999985
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=374.77 Aligned_cols=246 Identities=17% Similarity=0.136 Sum_probs=199.0
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
..+.||+|+||.||+|.+.. +++.||||++........+.+.+|+.+|++++||||+++++++.+.+..+|||||++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETA---TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEECC-----CEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred cceEEecCcCEEEEEEEEcC---CCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 35578999999999999987 788999999987554445689999999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee--cCCCCCeeecccCccccCCC---Cc
Q 010340 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF--DENGDPRLSCFGLMKNSRDG---KS 228 (512)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~~~kl~Dfg~a~~~~~~---~~ 228 (512)
+++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..... ..
T Consensus 170 ~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 170 GGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp TCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 9999998864 4456999999999999999999999999 9999999999999 56788999999999875443 24
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc--cCCCCCHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH--LEGNFSSEEATVVFDLA 306 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li 306 (512)
..||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... .........++.+.+||
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li 323 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET----LNNILACRWDLEDEEFQDISEEAKEFI 323 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCSCSGGGTTSCHHHHHHH
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhccCCCChhhhccCCHHHHHHH
Confidence 4689999999999888899999999999999999999988764322111 11111111 11111123456789999
Q ss_pred HHhhccCCCCCCChHHHHHHhc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+||+.||.+|||+.+++++-.
T Consensus 324 ~~~L~~dp~~Rps~~e~l~hp~ 345 (373)
T 2x4f_A 324 SKLLIKEKSWRISASEALKHPW 345 (373)
T ss_dssp HTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHcCCChhhCCCHHHHhcCcC
Confidence 9999999999999999999743
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-46 Score=368.69 Aligned_cols=248 Identities=18% Similarity=0.189 Sum_probs=205.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CeEEeeEEecCCCeEEEEEEECC---CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46678889999999999999987 78899999997654332 35688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC---CCCeeecccCccccCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGLMKNSRD 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfg~a~~~~~ 225 (512)
|||++||+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||++.....
T Consensus 107 ~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 107 FDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp ECCCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 99999999999996 4567999999999999999999999999 9999999999999764 4599999999987654
Q ss_pred C---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc--CCCCCHHHHH
Q 010340 226 G---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL--EGNFSSEEAT 300 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 300 (512)
. ....||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+..... ........++
T Consensus 184 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ 259 (362)
T 2bdw_A 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY----AQIKAGAYDYPSPEWDTVTP 259 (362)
T ss_dssp CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCTTGGGGSCH
T ss_pred CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCCcccccCCCH
Confidence 3 2457899999999999889999999999999999999999887643221111 11111111 1111134567
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+.+||.+||+.||.+|||+.+++++-+
T Consensus 260 ~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 260 EAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 7899999999999999999999998744
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=366.19 Aligned_cols=253 Identities=17% Similarity=0.247 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCC----ee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD----ER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 145 (512)
..+.+++.||+|+||.||+|.+ .++.||||++..... ....+.+|+.++.+++||||+++++++.... .+
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQL-----LNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEE-----TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhchhhheecccCceEEEEEEE-----CCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 4677888999999999999987 467899999975431 2345677999999999999999999998754 36
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CCccccccCccceeecCCCCCeee
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE----------GRPLYHDLNAYRVLFDENGDPRLS 215 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------~~iiH~Dlkp~Nill~~~~~~kl~ 215 (512)
++||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEc
Confidence 999999999999999964 4599999999999999999999998 8 9999999999999999999999
Q ss_pred cccCccccCCC------CccccCcccCCcccccC-----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHH-------HH
Q 010340 216 CFGLMKNSRDG------KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALD-------MI 277 (512)
Q Consensus 216 Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~-------~~ 277 (512)
|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... ..
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 99999754332 23568999999999976 34677899999999999999999876532100 00
Q ss_pred h-ccc---hhh-hcccccCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 278 R-GKN---ILH-LMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 278 ~-~~~---~~~-~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
. ... +.. .......+..+ ...+..+.+||.+||+.||++|||+.++++.|+.+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 000 000 11111111111 2456679999999999999999999999999988753
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=359.33 Aligned_cols=257 Identities=14% Similarity=0.167 Sum_probs=208.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCC--eeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 147 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.... ..++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKK---TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 46678889999999999999987 788999999986442 33567889999999999999999999998755 7899
Q ss_pred EEEccCCCCHHhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee----cCCCCCeeecccCccc
Q 010340 148 VAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMKN 222 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfg~a~~ 222 (512)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 999999999999997532 233999999999999999999999999 9999999999999 7788899999999987
Q ss_pred cCCCC---ccccCcccCCccccc--------CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc-----
Q 010340 223 SRDGK---SYSTNLAYTPPEYLR--------NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM----- 286 (512)
Q Consensus 223 ~~~~~---~~~~t~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~----- 286 (512)
..... ...||+.|+|||++. +..++.++|||||||++|||+||+.||............+..+.
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245 (319)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCT
T ss_pred cCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCc
Confidence 54432 456899999999986 56789999999999999999999988642110000000000000
Q ss_pred ------------------ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 287 ------------------DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 287 ------------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.......++...+..+.+++.+||+.||++|||+.+++++.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 001112445778889999999999999999999999999987644
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=367.39 Aligned_cols=255 Identities=18% Similarity=0.265 Sum_probs=205.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
++.+++.||+|+||.||+|.+..+.. ....||+|.+..... ...+.+.+|+.++++++||||++++++|.+.. .++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v 94 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI 94 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEE
Confidence 46678899999999999999875211 123468898865432 33568999999999999999999999998754 7899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 95 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp EECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999999975 4567999999999999999999999999 9999999999999999999999999987654321
Q ss_pred -----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... ...+...+........+..++..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTID 247 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTBCHH
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC-----HHHHHHHHHcCCCCCCCccCCHH
Confidence 2345778999999999999999999999999999999 887764321 12222333333333445566778
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 248 ~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999988654
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-46 Score=376.05 Aligned_cols=254 Identities=19% Similarity=0.171 Sum_probs=206.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
..++.+++.||+|+||.||+|+++. +++.||||++.+.. ......+.+|+.++..++||||++++++|.+.+.+
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcC---CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 3456688899999999999999987 78999999997532 12234589999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+|||||++||+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 150 ~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 999999999999999974 3567999999999999999999999999 99999999999999999999999999976543
Q ss_pred C-----CccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 226 G-----KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 226 ~-----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
. ...+||+.|+|||++. ...++.++|||||||++|||++|+.||.......... .+.........+...
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~-~i~~~~~~~~~p~~~ 306 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHKERFQFPTQV 306 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HHHTHHHHCCCCSSC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH-hhhhccccccCCccc
Confidence 2 2357899999999997 4568999999999999999999998876542221111 111100000111112
Q ss_pred HHHHHHHHHHHHHhhccCCCC--CCChHHHHHHhc
Q 010340 296 SEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLA 328 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~--Rps~~~vl~~L~ 328 (512)
...++.+.+||.+||..+|++ ||++.++++|-.
T Consensus 307 ~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 307 TDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred ccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 235677889999999888888 999999998844
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=354.12 Aligned_cols=250 Identities=23% Similarity=0.330 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.+++.||+|+||.||++.+. ++..||||++..... ..+.+.+|++++..++||||+++++++.+.+..++||
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEET----TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHhHhhcCCCCCceEEEEEEc----CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 36778899999999999999887 566799999986542 4578999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 99 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 99 EYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp CCCTTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred eccCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 99999999999964 2456999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
....+|+.|+|||++.+..++.++||||||+++|+|+| |+.||....... ....+........+...++.+.
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~ 251 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----TAEHIAQGLRLYRPHLASEKVY 251 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHHHTTCCCCCCTTCCHHHH
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH-----HHHHHhcccCCCCCCcCCHHHH
Confidence 23446778999999998899999999999999999998 887764322111 1111111222233444566788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+++.+||+.||.+|||+.+++++|..+.
T Consensus 252 ~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 252 TIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 9999999999999999999999998764
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=381.73 Aligned_cols=248 Identities=20% Similarity=0.231 Sum_probs=200.5
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
...+.+++.||+|+||.||+|.+.. +++.||||++.... ......+.+|+.+++.++||||++++++|.+.+.+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 223 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL 223 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcC---CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence 3467788999999999999999987 78899999997542 22345688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
+|||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++...
T Consensus 224 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 224 CFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 999999999999999973 4579999999999999999999998 88 9999999999999999999999999997643
Q ss_pred C----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 225 D----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 225 ~----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+... ...++...++
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~~~ 374 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILME--EIRFPRTLGP 374 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCH
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH----HHHhC--CCCCCccCCH
Confidence 2 235678999999999999999999999999999999999998876432221111 11111 1234455667
Q ss_pred HHHHHHHHhhccCCCCCC-----ChHHHHHHhc
Q 010340 301 VVFDLASRCLQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rp-----s~~~vl~~L~ 328 (512)
.+.+||.+||+.||.+|| ++.++++|-.
T Consensus 375 ~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~ 407 (446)
T 4ejn_A 375 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407 (446)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred HHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcc
Confidence 789999999999999999 9999998744
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-46 Score=379.51 Aligned_cols=251 Identities=20% Similarity=0.292 Sum_probs=209.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+.+++.||+|+||.||+|.+. ++..||||+++... ...+.|.+|+.+|+.++|||||++++++. .+..+||||
T Consensus 189 ~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 189 SLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GEEEEEEEECCSSEEEEEEEET----TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred HeEEEEEcccCCceEEEEEEEC----CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 4567788999999999999986 45679999998654 35678999999999999999999999986 567899999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
|+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 999999999997544447899999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....+++.|+|||++.+..++.++|||||||++|||+| |+.|+....... +...+........+..+++.+.+
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~l~~ 416 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----VIRALERGYRMPRPENCPEELYN 416 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----HHHHHHHTCCCCCCTTSCHHHHH
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHHHH
Confidence 23345778999999998899999999999999999999 887765432111 11112222233445566778999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
||.+||+.||++|||+.+|++.|+.+...
T Consensus 417 li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 417 IMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999987643
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=366.15 Aligned_cols=250 Identities=20% Similarity=0.209 Sum_probs=207.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|++++++++||||+++++++...+..+||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeeeeEEccCCCEEEEEEEEcc---CCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 5567889999999999999877 78999999997654332 24688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 228 (512)
|||+. |+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 133 ~e~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp EECCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred EecCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 99997 588888854 3567999999999999999999999999 99999999999999999999999999988777777
Q ss_pred cccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 229 ~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
..||+.|+|||++. +..++.++|||||||++|||++|+.|+........ ...+.........+...+..+.+|
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l 285 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPALQSGHWSEYFRNF 285 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCCCTTSCHHHHHH
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhcCCCCCCCCCCCHHHHHH
Confidence 88999999999984 46789999999999999999999988654321111 111111111112233455678899
Q ss_pred HHHhhccCCCCCCChHHHHHHhcccc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
|.+||+.||.+|||+.+++++..-..
T Consensus 286 i~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 286 VDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp HHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred HHHHcccChhhCcCHHHHhhChhhhc
Confidence 99999999999999999999866543
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-46 Score=371.28 Aligned_cols=257 Identities=19% Similarity=0.265 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCCe-
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDE- 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~- 144 (512)
..+.+++.||+|+||.||+|.+.. ...+++.||||++....... .+.+.+|++++.++ +||||++++++|.+.+.
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 456688899999999999999643 22377899999997653222 35699999999999 89999999999987554
Q ss_pred eEEEEEccCCCCHHhhhhhcCC----------------------------------------------------------
Q 010340 145 RLLVAEYMPNDTLAKHLFHWEN---------------------------------------------------------- 166 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~---------------------------------------------------------- 166 (512)
.++||||+++|+|.+++.....
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 8999999999999999975321
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC------CccccCcc
Q 010340 167 ------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG------KSYSTNLA 234 (512)
Q Consensus 167 ------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~ 234 (512)
..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 12899999999999999999999999 999999999999999999999999999765332 23457889
Q ss_pred cCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccC
Q 010340 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313 (512)
Q Consensus 235 y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 313 (512)
|+|||++.+..++.++|||||||++|||+| |..||....... .....+........+...++.+.+++.+||+.|
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 336 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 336 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999998899999999999999999998 887765432111 111112222233344556677899999999999
Q ss_pred CCCCCChHHHHHHhcccc
Q 010340 314 PRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 314 p~~Rps~~~vl~~L~~~~ 331 (512)
|.+|||+.+++++|+.+.
T Consensus 337 P~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 337 PSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp GGGSCCHHHHHHHHHHHH
T ss_pred hhhCCCHHHHHHHHHHHH
Confidence 999999999999998765
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-46 Score=371.51 Aligned_cols=252 Identities=19% Similarity=0.164 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..|.+++.||+|+||.||+|.+.. +++.||+|++......+...+.+|+.+|+.++||||+++++++.+....++||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKA---TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEecCCCEEEEEEEECC---CCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 356788899999999999999987 78899999997654334457899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec--CCCCCeeecccCccccCCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD--ENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++ ..+.+||+|||+++......
T Consensus 128 E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 128 EFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp ECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred EcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999999999963 3457999999999999999999999999 99999999999997 45789999999998765432
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...||+.|+|||++.+..++.++|||||||++|||++|..||......... ..+.. .............+..+.+
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-~~i~~-~~~~~~~~~~~~~s~~~~~ 283 (387)
T 1kob_A 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL-QNVKR-CDWEFDEDAFSSVSPEAKD 283 (387)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHH-CCCCCCSSTTTTSCHHHHH
T ss_pred ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH-HHHHh-CCCCCCccccccCCHHHHH
Confidence 346899999999999888999999999999999999999887643211110 00100 0111112223345677899
Q ss_pred HHHHhhccCCCCCCChHHHHHHhc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
||.+||+.||.+|||+.+++++-.
T Consensus 284 li~~~L~~dP~~Rpt~~ell~hp~ 307 (387)
T 1kob_A 284 FIKNLLQKEPRKRLTVHDALEHPW 307 (387)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHcCCChhHCcCHHHHhhCcc
Confidence 999999999999999999998854
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-46 Score=366.93 Aligned_cols=259 Identities=23% Similarity=0.297 Sum_probs=211.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
...+.+++.||+|+||.||+|.+.... .+++.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 355678889999999999999987421 256899999998654222 35789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccc
Q 010340 146 LLVAEYMPNDTLAKHLFHWE----------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~N 203 (512)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~N 204 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRN 204 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcce
Confidence 99999999999999997532 257999999999999999999999999 9999999999
Q ss_pred eeecCCCCCeeecccCccccCC------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHH
Q 010340 204 VLFDENGDPRLSCFGLMKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDM 276 (512)
Q Consensus 204 ill~~~~~~kl~Dfg~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~ 276 (512)
||++.++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|||+| |..|+.......
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 284 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence 9999999999999999875422 223457889999999998899999999999999999999 887765432211
Q ss_pred HhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 277 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
. ...+........+..++..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 285 ~-----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 285 V-----IYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp H-----HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred H-----HHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 1 111111112234455667799999999999999999999999999988654
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=360.81 Aligned_cols=246 Identities=17% Similarity=0.225 Sum_probs=197.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCC------
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD------ 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 143 (512)
.|.+++.||+|+||.||+|++.. +++.||||++...... ..+.+.+|+.+|++++||||++++++|.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKV---DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETT---TCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcC---CCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 46688899999999999999987 7889999999755433 2467999999999999999999999986643
Q ss_pred ---------------------------------------------------eeEEEEEccCCCCHHhhhhhcCC-CCCCH
Q 010340 144 ---------------------------------------------------ERLLVAEYMPNDTLAKHLFHWEN-QTIEW 171 (512)
Q Consensus 144 ---------------------------------------------------~~~lv~E~~~~g~L~~~l~~~~~-~~l~~ 171 (512)
..++||||+++|+|.+++..... ...++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999975322 34567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----------------CccccCccc
Q 010340 172 AMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----------------KSYSTNLAY 235 (512)
Q Consensus 172 ~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~----------------~~~~~t~~y 235 (512)
..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 789999999999999999999 999999999999999999999999999865432 234689999
Q ss_pred CCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCC
Q 010340 236 TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPR 315 (512)
Q Consensus 236 ~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 315 (512)
+|||++.+..++.++|||||||++|||++|..|+.... . ..........+......++.+.+|+.+||+.||.
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 315 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-R------IITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPT 315 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-H------HHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGG
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-H------HHHHhhccCCCcccccCChhHHHHHHHHccCCCC
Confidence 99999999899999999999999999999976532111 0 0110111111111234456788999999999999
Q ss_pred CCCChHHHHHHh
Q 010340 316 ERPNTKDLVSTL 327 (512)
Q Consensus 316 ~Rps~~~vl~~L 327 (512)
+|||+.+++++-
T Consensus 316 ~Rps~~~~l~~~ 327 (332)
T 3qd2_B 316 ERPEATDIIENA 327 (332)
T ss_dssp GSCCHHHHHHST
T ss_pred cCCCHHHHhhch
Confidence 999999999873
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-46 Score=355.95 Aligned_cols=254 Identities=19% Similarity=0.278 Sum_probs=198.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..+.+++.||+|+||.||+|.+..+...+..||||++....... .+.+.+|+.+++.++||||+++++++. .+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 35668889999999999999987654456789999987643221 356899999999999999999999985 4678999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999999974 3457999999999999999999999999 9999999999999999999999999997654322
Q ss_pred ----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 228 ----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+........+..+++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENGERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----HHHHHHHHcCCCCCCCCCCCHHH
Confidence 2345778999999988899999999999999999997 7766543211 11111111112233455667789
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+++.+||+.||++|||+.++++.|+.+.
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999999999998764
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-46 Score=365.14 Aligned_cols=247 Identities=19% Similarity=0.212 Sum_probs=207.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
.+..|.+++.||+|+||.||+|.+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 83 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYK---TQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTD 83 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence 34578889999999999999999987 78899999987532 1224579999999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+ +|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 84 ~~lv~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 84 IVMVIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EEEEECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEEEEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999999 6799998863 457999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc--CCCCCHHH
Q 010340 225 DG---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL--EGNFSSEE 298 (512)
Q Consensus 225 ~~---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 298 (512)
.. ....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.... ...+..... ....+...
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--------~~~~~~~i~~~~~~~p~~~ 231 (336)
T 3h4j_B 160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF--------IPNLFKKVNSCVYVMPDFL 231 (336)
T ss_dssp TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS--------STTCBCCCCSSCCCCCTTS
T ss_pred CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHcCCCCCcccC
Confidence 43 35578999999999988776 689999999999999999998865421 111111111 12334556
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
++.+.+|+.+||+.||.+|||+.+++++-+-
T Consensus 232 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~ 262 (336)
T 3h4j_B 232 SPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262 (336)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHhChhh
Confidence 6778999999999999999999999988654
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=352.56 Aligned_cols=251 Identities=21% Similarity=0.261 Sum_probs=197.9
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC----ChhHHHHHHHHHhcCCCCCccceEEEEeeCC
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP----DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 143 (512)
++..+.+.+.||+|+||.||+|.+ +++.||||++...... ..+.+.+|+++++.++||||+++++++.+.+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFW-----IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP 79 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEE-----TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-
T ss_pred chhheeeeeeeccCCCeEEEEEEE-----cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 356777888999999999999997 4677999998765432 2467899999999999999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CccccccCccceeecC--------CCCCe
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFDE--------NGDPR 213 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~iiH~Dlkp~Nill~~--------~~~~k 213 (512)
..++||||+++++|.+++. ...+++..++.++.|++.||.|||+++ +++||||||+|||++. ++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k 156 (271)
T 3dtc_A 80 NLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK 156 (271)
T ss_dssp -CEEEEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred ceEEEEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence 9999999999999999994 567999999999999999999999987 3789999999999985 77899
Q ss_pred eecccCccccCCC--CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC
Q 010340 214 LSCFGLMKNSRDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE 291 (512)
Q Consensus 214 l~Dfg~a~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (512)
|+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||........ ..........
T Consensus 157 l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~ 232 (271)
T 3dtc_A 157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV----AYGVAMNKLA 232 (271)
T ss_dssp ECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH----HHHHHTSCCC
T ss_pred EccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHhhhcCCCC
Confidence 9999999765432 245789999999999988899999999999999999999988754321111 1111122223
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
...+..+++.+.+++.+||+.||.+|||+.+++++|+.+
T Consensus 233 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 344556667899999999999999999999999999754
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=351.77 Aligned_cols=254 Identities=20% Similarity=0.290 Sum_probs=209.4
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeC--Ce
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG--DE 144 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 144 (512)
+..+.+++.||+|+||.||+|.+ +++.||||++....... .+.+.+|+.++++++||||+++++++.+. ..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-----QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-----CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCC
Confidence 45677889999999999999998 45679999998654332 35699999999999999999999999887 78
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeecCCCCCeeecccCcccc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
.++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ +++||||||+|||++.++.++|+|||+....
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 899999999999999998644456999999999999999999999865 4999999999999999999999999886543
Q ss_pred CCCCccccCcccCCcccccCCCCCC---CCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 224 RDGKSYSTNLAYTPPEYLRNGRVTP---ESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 224 ~~~~~~~~t~~y~aPE~~~~~~~~~---~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
.. ....+|+.|+|||++.+..++. ++|||||||++|||++|+.||........ .............+...+.
T Consensus 164 ~~-~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 238 (271)
T 3kmu_A 164 QS-PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----GMKVALEGLRPTIPPGISP 238 (271)
T ss_dssp SC-TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----HHHHHHSCCCCCCCTTCCH
T ss_pred cc-cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----HHHHHhcCCCCCCCCCCCH
Confidence 32 3457899999999998766554 79999999999999999988754322111 1122222233345556677
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 239 ~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 89999999999999999999999999988754
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=369.91 Aligned_cols=257 Identities=21% Similarity=0.289 Sum_probs=211.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCC----CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDG----NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~----~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 143 (512)
..+.+++.||+|+||.||+|.+... ...+..||||++....... ...+.+|+++++.+ +||||++++++|.+.+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 3566788899999999999997542 1245789999997653221 35689999999999 9999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 209 (512)
..++||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCC
Confidence 9999999999999999997533 245999999999999999999999999 9999999999999999
Q ss_pred CCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccch
Q 010340 210 GDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNI 282 (512)
Q Consensus 210 ~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 282 (512)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..|+....... +
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~-----~ 302 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-----L 302 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----H
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----H
Confidence 99999999999865432 23356788999999999999999999999999999999 887765432211 1
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 283 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
...+........+..++..+.+|+.+||+.||++|||+.+++++|+.+..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 303 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22222222334455566779999999999999999999999999998763
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-45 Score=349.67 Aligned_cols=253 Identities=21% Similarity=0.366 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh-------hHHHHHHHHHhcCCCCCccceEEEEeeC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-------KQFADEAWGVGKLRHKRLANLIGYCCDG 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~ 142 (512)
..+.+++.||+|+||.||+|.+.. +++.||||++........ +.+.+|+.++++++||||+++++++.+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVK---DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETT---TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred ccceehhccccCCceeEEEEEEcC---CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 456788899999999999999987 788999999976543322 5789999999999999999999999765
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-ccccccCccceeecCCCC-----Ceeec
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR-PLYHDLNAYRVLFDENGD-----PRLSC 216 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-iiH~Dlkp~Nill~~~~~-----~kl~D 216 (512)
. ++||||+++|+|.+++.. ....+++..++.++.|++.||.|||+.++ ++||||||+|||++.++. +||+|
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred C--eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 4 799999999999998864 45679999999999999999999999863 999999999999987776 99999
Q ss_pred ccCccccCCC-CccccCcccCCccccc--CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 217 FGLMKNSRDG-KSYSTNLAYTPPEYLR--NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 217 fg~a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
||+++..... ....||+.|+|||++. ...++.++|||||||++|+|++|+.||......... .............
T Consensus 173 fg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~ 250 (287)
T 4f0f_A 173 FGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREEGLRPT 250 (287)
T ss_dssp CTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH--HHHHHHHSCCCCC
T ss_pred CCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH--HHHHHhccCCCCC
Confidence 9999865443 3467899999999984 455789999999999999999999886532111110 0111122233344
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+..+++.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 5566677899999999999999999999999998764
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=362.29 Aligned_cols=257 Identities=22% Similarity=0.300 Sum_probs=204.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC-CCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.+.+.+.||+|+||.||+|.+.... ..+..||||++...... ....+.+|+.+++.++||||+++++++.+.+..+||
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 4556778999999999999987532 13567999999764322 134689999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 125 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999999964 4567999999999999999999999999 9999999999999999999999999987654321
Q ss_pred ------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +...+........+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 277 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-----VMKAINDGFRLPTPMDCPS 277 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTTCCCCCCTTCBH
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHHCCCcCCCcccCCH
Confidence 2234678999999998899999999999999999999 887765332111 1111111222233455667
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
.+.+++.+||+.||.+||++.++++.|+.+...+
T Consensus 278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 278 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999876543
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=355.02 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=213.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..+.+++.||+|+||.||+|.+.. ++..||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGG---GTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cceeEEeecCCCCceeEEEeEecC---CCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 356678899999999999999987 78899999997543 23567999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++.......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 167 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence 9999999999998766677999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..|+.... .......+........+..+++.+.
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~ 242 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKVY 242 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhccCCCCCCCCCCHHHH
Confidence 2345778999999998899999999999999999999 776654321 1122222223333344556677899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+|+.+||..||.+|||+.++++.|+.+.
T Consensus 243 ~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 243 ELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999999998764
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=363.07 Aligned_cols=247 Identities=18% Similarity=0.191 Sum_probs=204.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC-----CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-----WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRE---TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECC---CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 46788899999999999999987 78899999986421 12357799999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC---CeeecccCc
Q 010340 146 LLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGLM 220 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfg~a 220 (512)
+|||||++|++|.+++... ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999998888642 3346899999999999999999999999 999999999999986554 999999999
Q ss_pred cccCCC----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC-
Q 010340 221 KNSRDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS- 295 (512)
Q Consensus 221 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (512)
...... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ..+..... ..+
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----~~i~~~~~--~~~~ 253 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF-----EGIIKGKY--KMNP 253 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHH-----HHHHHTCC--CCCH
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHH-----HHHHcCCC--CCCc
Confidence 875543 245689999999999988999999999999999999999988765422111 11111111 111
Q ss_pred ---HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 296 ---SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 296 ---~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+..+.+||.+||+.||++|||+.+++++-.
T Consensus 254 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~ 289 (351)
T 3c0i_A 254 RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPW 289 (351)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence 124567899999999999999999999998743
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=357.91 Aligned_cols=248 Identities=21% Similarity=0.234 Sum_probs=196.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhc--CCCCCccceEEEEeeC----Ce
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGK--LRHKRLANLIGYCCDG----DE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~ 144 (512)
.+.+++.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++... ..
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-----QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-----CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 566788999999999999987 5678999998754 24566777777766 7999999999997653 45
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCccccccCccceeecCCCCCeeec
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS--------SEGRPLYHDLNAYRVLFDENGDPRLSC 216 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~D 216 (512)
.++||||+++|+|.+++. ...+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|
T Consensus 81 ~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEEEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECC
T ss_pred eEEehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEee
Confidence 899999999999999994 457999999999999999999999 888 99999999999999999999999
Q ss_pred ccCccccCCC--------CccccCcccCCcccccCC------CCCCCCcEEehHHHHHHHHhC----------CCCCChh
Q 010340 217 FGLMKNSRDG--------KSYSTNLAYTPPEYLRNG------RVTPESVIFSFGTVLLDLLSG----------KHIPPSH 272 (512)
Q Consensus 217 fg~a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~~~~~~~ 272 (512)
||+++..... ....||+.|+|||++.+. .++.++|||||||++|||+|| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 9998754332 233789999999999876 456799999999999999999 6665432
Q ss_pred hHHHHhccchhhhc-ccccCCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 273 ALDMIRGKNILHLM-DSHLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 273 ~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.............. ........ +...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 11000000111111 11111222 235678899999999999999999999999999865
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-46 Score=363.52 Aligned_cols=262 Identities=19% Similarity=0.254 Sum_probs=195.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCee--
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDER-- 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 145 (512)
..+.+++.||+|+||.||+|.+.........||||++....... .+.+.+|+.++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 35668889999999999999987633223479999998654322 46799999999999999999999999876655
Q ss_pred ----EEEEEccCCCCHHhhhhhcC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 146 ----LLVAEYMPNDTLAKHLFHWE----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 146 ----~lv~E~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeec
Confidence 99999999999999996422 225899999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhccccc
Q 010340 218 GLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHL 290 (512)
Q Consensus 218 g~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (512)
|+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..|+..... ......+....
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~~ 256 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AEIYNYLIGGN 256 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTC
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----HHHHHHHhcCC
Confidence 9997653322 3345778999999998899999999999999999999 7766543211 11111111112
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCCCCC
Q 010340 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVP 337 (512)
Q Consensus 291 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~ 337 (512)
....+...+..+.+|+.+||+.||.+|||+.++++.|+.+...++..
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 23344556677999999999999999999999999999988766543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=364.44 Aligned_cols=248 Identities=22% Similarity=0.231 Sum_probs=191.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKG---TQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEeeCCCEEEEEEEECC---CCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 5677889999999999999987 78889999998643 346788999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCccccCCC--
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a~~~~~~-- 226 (512)
+++|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 130 VTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp CCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 99999999996 4567999999999999999999999999 999999999999975 889999999998865432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....||+.|+|||++.+..++.++|||||||++|||++|+.||............+... ............+..+.+|
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~l 285 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-EYYFISPWWDEVSLNAKDL 285 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT-CCCCCTTTTTTSCHHHHHH
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC-CCccCCchhhhCCHHHHHH
Confidence 34578999999999998899999999999999999999998876432221111111110 0011112224456778999
Q ss_pred HHHhhccCCCCCCChHHHHHHhc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
|.+||+.||++|||+.+++++-.
T Consensus 286 i~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 286 VRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp HHTTSCSSGGGSCCHHHHHHSTT
T ss_pred HHHHccCChhhCcCHHHHhcCcc
Confidence 99999999999999999998743
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=359.14 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..+.+++.||+|+||.||+|.+... ..+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 3566788899999999999987431 125688999999754322 2357899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccce
Q 010340 147 LVAEYMPNDTLAKHLFHWEN----------------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Ni 204 (512)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ ++||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheE
Confidence 99999999999999975322 34899999999999999999999999 99999999999
Q ss_pred eecCCCCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHH
Q 010340 205 LFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMI 277 (512)
Q Consensus 205 ll~~~~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~ 277 (512)
|++.++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||+| |..|+.....
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--- 258 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--- 258 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG---
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 9999999999999999765432 23346788999999998889999999999999999999 8877653321
Q ss_pred hccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 278 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
......+........+...++.+.+++.+||+.||.+|||+.+++++|+.+.
T Consensus 259 --~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 259 --ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp --GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1122222222233445566778999999999999999999999999998764
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-45 Score=367.55 Aligned_cols=254 Identities=16% Similarity=0.181 Sum_probs=203.6
Q ss_pred CcccccccCCCC--CCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEK--APNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G--~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
..|.+++.||+| +||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++|||||++++++.+.+..
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKP---TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcC---CCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 357788999999 999999999987 78899999998654332 35688899999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||.+.....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999998655577999999999999999999999999 99999999999999999999999998754311
Q ss_pred -----------CCccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc----cchhhhccc
Q 010340 226 -----------GKSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG----KNILHLMDS 288 (512)
Q Consensus 226 -----------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~----~~~~~~~~~ 288 (512)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .....+.+.
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 123468899999999987 579999999999999999999998875421110000 000000000
Q ss_pred ------------------------------------ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 289 ------------------------------------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 289 ------------------------------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
......+...++.+.+||.+||+.||++|||+.+++++-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp 335 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 335 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSG
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCH
Confidence 000012234456789999999999999999999999883
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=366.47 Aligned_cols=256 Identities=20% Similarity=0.284 Sum_probs=198.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEee-CCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 149 (512)
+.+.+.||+|+||.||+|.+.........||||.+...... ..+.|.+|+.++++++||||++++++|.. .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 44567899999999999998654334567999998754322 24679999999999999999999999765 45789999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 171 PYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp ECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred ECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999999964 4456899999999999999999999999 999999999999999999999999999754322
Q ss_pred -----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 227 -----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
....+|+.|+|||++.+..++.++|||||||++|||+||..|++.... .......+........+..++..
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~----~~~~~~~~~~~~~~~~p~~~~~~ 324 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----TFDITVYLLQGRRLLQPEYCPDP 324 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC----SSCHHHHHHTTCCCCCCTTCCHH
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC----HHHHHHHHHcCCCCCCCCCCCHH
Confidence 223467789999999989999999999999999999996555443211 11111111111222334456677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 325 l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 325 LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 89999999999999999999999999987644
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=371.78 Aligned_cols=252 Identities=16% Similarity=0.114 Sum_probs=196.1
Q ss_pred Cccccc-ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhc-CCCCCccceEEEEee----CC
Q 010340 70 SSDFIV-SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGK-LRHKRLANLIGYCCD----GD 143 (512)
Q Consensus 70 ~~~~~i-~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~ 143 (512)
..|.++ +.||+|+||.||++.+.. +++.||||++.. ...+.+|+.++.+ .+||||+++++++.. ..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~---~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeccceeeeccCeEEEEEEECC---CCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 345555 578999999999999987 788999999863 3568889998854 489999999999875 56
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLM 220 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a 220 (512)
.++|||||++||+|.+++.......+++..++.|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccc
Confidence 7899999999999999997544557999999999999999999999999 999999999999987 789999999999
Q ss_pred cccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc--cCCCCC
Q 010340 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH--LEGNFS 295 (512)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 295 (512)
+..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...............+.... ......
T Consensus 212 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 291 (400)
T 1nxk_A 212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 291 (400)
T ss_dssp EECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTT
T ss_pred cccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccc
Confidence 865432 345789999999999988999999999999999999999988754311100000001111111 111112
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
...+..+.+||.+||+.||.+|||+.++++|-+-.
T Consensus 292 ~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 326 (400)
T 1nxk_A 292 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326 (400)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 34567789999999999999999999999986643
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=376.64 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=205.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+.+.+.||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+||||
T Consensus 185 ~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 185 SLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GEEEEEEEEECSSCEEEEEEETT----TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred HceeeeeecCCCCeEEEEEEECC----CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 45677889999999999999873 4569999998654 346789999999999999999999999976 67899999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
|+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 999999999997544456999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....+++.|+|||++.+..++.++|||||||++|||+| |+.|+...... .+...+........+..+++.+.+
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~ 412 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPECPESLHD 412 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTSCHHHHH
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHH
Confidence 12345778999999998899999999999999999999 77776543211 111122222333445667778999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
||.+||+.||++|||+.++++.|+.+...
T Consensus 413 li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 413 LMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 99999999999999999999999987643
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=359.86 Aligned_cols=250 Identities=19% Similarity=0.239 Sum_probs=200.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----CChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
..+.+++.||+|+||.||++....+..+++.||||+++.... .....+.+|+.+|+.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 357788899999999999999864444789999999986532 2235688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999973 456899999999999999999999999 99999999999999999999999999875432
Q ss_pred ----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 226 ----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...+... ...++...+..
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~ 247 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT----IDKILKC--KLNLPPYLTQE 247 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHT--CCCCCTTSCHH
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHH
Confidence 2345789999999999988999999999999999999999988764322111 1111111 12344556677
Q ss_pred HHHHHHHhhccCCCCCC-----ChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rp-----s~~~vl~~L~ 328 (512)
+.+|+.+||..||.+|| ++.++++|-.
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 89999999999999999 7889988754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=355.10 Aligned_cols=252 Identities=21% Similarity=0.266 Sum_probs=198.8
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
...|.+++.||+|+||.||+|.+. +++.||||++....... ...+.+|+.++++++||||+++++++.+....+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS----QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET----TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC----CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence 356788999999999999999985 57889999997654322 357899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
+||||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 96 lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 96 LVFEFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEEECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEEcCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99999985 88888864 4456999999999999999999999999 99999999999999999999999999976542
Q ss_pred ---CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc------------
Q 010340 226 ---GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH------------ 289 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~------------ 289 (512)
.....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ..+.......
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL-PKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH-HHHHHHHCCCCTTTSGGGTTSH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHHCCCChHHhhhhhccc
Confidence 234467999999999976 45899999999999999999999887543111000 0000000000
Q ss_pred ------c--CCC-----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 290 ------L--EGN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 290 ------~--~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
. ... ..+..++++.+||.+||+.||.+|||+.++++|-.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 303 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 0 000 01223467889999999999999999999998743
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=358.52 Aligned_cols=244 Identities=19% Similarity=0.181 Sum_probs=196.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+||+||+|.+.. +++.||||++....... ...+..|+..+..+ +||||++++++|.+.+..+|
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKE---DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETT---TSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred heeeeheeccCCCeEEEEEEECC---CCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 46678889999999999999987 78899999987654332 23455666666555 99999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+ +++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EEECC-CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred EEecc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 99999 6699998865 3457999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....||+.|+|||++.+ .++.++|||||||++|||++|..+|+..... ..+........++...++.+.+
T Consensus 212 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~ 283 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW-------QQLRQGYLPPEFTAGLSSELRS 283 (311)
T ss_dssp ---CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH-------HHHTTTCCCHHHHTTSCHHHHH
T ss_pred CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH-------HHHhccCCCcccccCCCHHHHH
Confidence 34568999999999875 7999999999999999999998766543211 1111111111112234567899
Q ss_pred HHHHhhccCCCCCCChHHHHHHhc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
|+.+||+.||++|||+.+++++-.
T Consensus 284 li~~~L~~dP~~Rpt~~ell~hp~ 307 (311)
T 3p1a_A 284 VLVMMLEPDPKLRATAEALLALPV 307 (311)
T ss_dssp HHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred HHHHHcCCChhhCcCHHHHHhCcc
Confidence 999999999999999999998743
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=354.56 Aligned_cols=252 Identities=19% Similarity=0.299 Sum_probs=198.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.++.+++.||+|+||.||++.+ .++.||||++... ...+.+.+|+.++++++||||+++++++.+ ..++|
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv 77 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-----RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLV 77 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-----TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEE-----CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEE
Confidence 45677888999999999999987 4567999998643 235679999999999999999999998874 48999
Q ss_pred EEccCCCCHHhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhc---CCCccccccCccceeecCCCC-CeeecccCcccc
Q 010340 149 AEYMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSS---EGRPLYHDLNAYRVLFDENGD-PRLSCFGLMKNS 223 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~---~~~iiH~Dlkp~Nill~~~~~-~kl~Dfg~a~~~ 223 (512)
|||+++|+|.+++..... ..+++..++.++.||+.||.|||+ ++ |+||||||+|||++.++. +||+|||++...
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~ 156 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEccccccccc
Confidence 999999999999974322 247899999999999999999999 67 999999999999998887 799999998765
Q ss_pred CC-CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 224 RD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 224 ~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.. .....||+.|+|||++.+..++.++|||||||++|||+||+.||......... .............+...+..+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l 233 (307)
T 2eva_A 157 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---IMWAVHNGTRPPLIKNLPKPI 233 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH---HHHHHHTTCCCCCBTTCCHHH
T ss_pred ccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH---HHHHHhcCCCCCcccccCHHH
Confidence 43 23456899999999999889999999999999999999999886532111000 000111112223344556678
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 234 ~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 234 ESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 8999999999999999999999999987643
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=353.61 Aligned_cols=254 Identities=21% Similarity=0.285 Sum_probs=207.9
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCee-EEEEEc
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER-LLVAEY 151 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv~E~ 151 (512)
+.+.||+|+||.||+|.+.....++..||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 346789999999999998765546668999999754322 235789999999999999999999999876655 999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC------
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD------ 225 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~------ 225 (512)
+.+|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 105 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (298)
T 3pls_A 105 MCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV 182 (298)
T ss_dssp CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred ccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence 999999999964 4567899999999999999999999999 99999999999999999999999999975432
Q ss_pred --CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 226 --GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
.....+|+.|+|||.+.+..++.++|||||||++|+|++|..||+.... .......+........+...+..+.
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (298)
T 3pls_A 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID----PFDLTHFLAQGRRLPQPEYCPDSLY 258 (298)
T ss_dssp CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----GGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC----HHHHHHHhhcCCCCCCCccchHHHH
Confidence 2234568899999999998999999999999999999997777654321 1112222222222334455667789
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+++.+||+.||.+|||+.++++.|+.+...
T Consensus 259 ~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999987643
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=363.46 Aligned_cols=259 Identities=20% Similarity=0.263 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
..+.+++.||+|+||.||+|.+... ..++..||||++..... ...+.+.+|+.++.++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 4566788999999999999997432 12677899999985432 2346799999999999 999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccce
Q 010340 146 LLVAEYMPNDTLAKHLFHWEN---------------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Ni 204 (512)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+||
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NI 203 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 203 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhE
Confidence 999999999999999975322 24899999999999999999999999 99999999999
Q ss_pred eecCCCCCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHH
Q 010340 205 LFDENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMI 277 (512)
Q Consensus 205 ll~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~ 277 (512)
|++.++.+||+|||++....... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..||......
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-- 281 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-- 281 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH--
Confidence 99999999999999997653322 3356788999999988899999999999999999998 88776543111
Q ss_pred hccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 278 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
......+........+...++.+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 282 --~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 282 --ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp --HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred --HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111222222233344555677899999999999999999999999999987654
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=382.55 Aligned_cols=253 Identities=20% Similarity=0.247 Sum_probs=210.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..+.+++.||+|+||.||+|.+.. +++.||||++.+.. ......+.+|+.+|..++|||||++++++.+.+..+
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~---tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 446678889999999999999987 78999999997532 233567899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
|||||++||+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 9999999999999997645556999999999999999999999999 999999999999999999999999999876543
Q ss_pred ---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...+. .....++...++.+.
T Consensus 340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~-~~~~~~p~~~s~~~~ 417 (576)
T 2acx_A 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVK-EVPEEYSERFSPQAR 417 (576)
T ss_dssp CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHH-HCCCCCCTTSCHHHH
T ss_pred ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhh-cccccCCccCCHHHH
Confidence 24578999999999998899999999999999999999998875431100 0000111111 112334555677899
Q ss_pred HHHHHhhccCCCCCC-----ChHHHHHHhc
Q 010340 304 DLASRCLQYEPRERP-----NTKDLVSTLA 328 (512)
Q Consensus 304 ~li~~cl~~~p~~Rp-----s~~~vl~~L~ 328 (512)
+||.+||..||.+|| ++.++++|-.
T Consensus 418 dLI~~lL~~dP~~R~g~~~~sa~eil~Hpf 447 (576)
T 2acx_A 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPL 447 (576)
T ss_dssp HHHHHHTCSSGGGSTTCSSSHHHHHHTSGG
T ss_pred HHHHHhccCCHHHcCCCCCCCHHHHHhChh
Confidence 999999999999999 7788888743
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=355.10 Aligned_cols=253 Identities=20% Similarity=0.268 Sum_probs=191.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+.|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKT---TGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp --------------CEEEEEECSS---SCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECC---CCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 356688899999999999999887 7889999999765432 346789999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 149 AEYMPNDTLAKHLFHWE----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
|||++ |+|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 99998 59999886422 246899999999999999999999999 9999999999999999999999999997654
Q ss_pred C----CCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc-------------
Q 010340 225 D----GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM------------- 286 (512)
Q Consensus 225 ~----~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~------------- 286 (512)
. .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.......... .+....
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK-LIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCSCCTTTCGGGGG
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCChhHhhhhhh
Confidence 2 2345789999999999764 58999999999999999999998876432211100 000000
Q ss_pred ----cccc------------CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 287 ----DSHL------------EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 287 ----~~~~------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.... ....+...+..+.+|+.+||+.||++|||+.+++++-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~ 296 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChh
Confidence 0000 00011123457889999999999999999999998743
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=351.49 Aligned_cols=251 Identities=20% Similarity=0.260 Sum_probs=199.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..|.+++.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 77 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVL 77 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcC----CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEE
Confidence 46778899999999999999984 678899999975432 224678999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC--
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~-- 225 (512)
||||+++ +|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 78 v~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 78 VFEHLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EEECCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred EEEecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9999976 89998864 4467999999999999999999999999 99999999999999999999999999876432
Q ss_pred --CCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc----------------
Q 010340 226 --GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM---------------- 286 (512)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~---------------- 286 (512)
.....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.......... .+....
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM-RIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHHCCCChhhchhhhcccc
Confidence 2344679999999999764 58999999999999999999998876432111000 000000
Q ss_pred -ccccC-------CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 287 -DSHLE-------GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 287 -~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.... .......++.+.+|+.+||+.||++|||+.+++++-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 283 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 00000 0111234567889999999999999999999998743
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=352.31 Aligned_cols=252 Identities=19% Similarity=0.196 Sum_probs=201.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-----ChhHHHHHHHHHhcCC---CCCccceEEEEeeC
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----DPKQFADEAWGVGKLR---HKRLANLIGYCCDG 142 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 142 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.+++.++ ||||++++++|...
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 10 RYEPVAEIGVGAYGTVYKARDPH---SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp CCEEEEEECCSSSCCEEEEECTT---TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred ceEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 56788899999999999999877 7889999999754321 2356788888888775 99999999999876
Q ss_pred C-----eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 143 D-----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 143 ~-----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
. ..++||||+. ++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeC
Confidence 5 5799999997 59999998655556999999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc-----
Q 010340 218 GLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH----- 289 (512)
Q Consensus 218 g~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~----- 289 (512)
|+++..... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+.......
T Consensus 165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~ 243 (308)
T 3g33_A 165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-KIFDLIGLPPEDDW 243 (308)
T ss_dssp SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHH-HHHHHHCCCCTTTS
T ss_pred ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCChhhc
Confidence 999765433 34578999999999999999999999999999999999998875432211110 011100000
Q ss_pred ----------cCCC-------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 290 ----------LEGN-------FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 290 ----------~~~~-------~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.... ..+..++.+.+||.+||+.||++|||+.++++|-.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~ 299 (308)
T 3g33_A 244 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299 (308)
T ss_dssp CSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred cchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence 0000 01234567889999999999999999999998744
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-45 Score=371.95 Aligned_cols=247 Identities=21% Similarity=0.254 Sum_probs=207.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 92 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHEL---TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIF 92 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETT---TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 457788899999999999999987 78899999997542 223467999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
|||||++||+|.+++. ..+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 93 lv~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 93 MVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999999996 4567999999999999999999999999 999999999999999999999999999875443
Q ss_pred ---CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......... ..+.... ...+...++.+
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~----~~i~~~~--~~~p~~~s~~~ 243 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLF----KKICDGI--FYTPQYLNPSV 243 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHH----HHHHTTC--CCCCTTCCHHH
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHH----HHHhcCC--cCCCccCCHHH
Confidence 34578999999999988765 67999999999999999999887543211111 1111111 12234456678
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+||.+||..||.+|||+.++++|-.
T Consensus 244 ~~Li~~~L~~dP~~Rpt~~eil~hp~ 269 (476)
T 2y94_A 244 ISLLKHMLQVDPMKRATIKDIREHEW 269 (476)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred HHHHHHHcCCCchhCcCHHHHHhCHH
Confidence 89999999999999999999998754
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=361.16 Aligned_cols=261 Identities=21% Similarity=0.276 Sum_probs=211.9
Q ss_pred cccccccCCCCCCCeEEEEEEcC-CCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEe--eCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC--DGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 147 (512)
.+.+++.||+|+||.||+|.+.. ...+++.||||++........+.+.+|++++++++||||+++++++. +....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 56688899999999999998532 12278899999998654334467999999999999999999999987 4566899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 104 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp EEECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred EEeecCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 9999999999999964 2346999999999999999999999999 9999999999999999999999999998654322
Q ss_pred -------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc----------cchhhhccccc
Q 010340 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG----------KNILHLMDSHL 290 (512)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~----------~~~~~~~~~~~ 290 (512)
...+|+.|+|||++.+..++.++|||||||++|+|++|+.|+.......... ......+....
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence 3356788999999998889999999999999999999998765443221111 11222223333
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 291 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
....+..+++.+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 262 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 262 RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 3445566778899999999999999999999999999987643
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=353.69 Aligned_cols=256 Identities=20% Similarity=0.288 Sum_probs=203.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEe-eCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCC-DGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv 148 (512)
.+.+.+.||+|+||.||+|.+.........||||.+...... ..+.+.+|+.++++++||||+++++++. ..+..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 466778899999999999998764435567999998764322 2357899999999999999999999965 45678999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 106 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 106 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp EECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred EeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 999999999999964 4567899999999999999999999999 999999999999999999999999999755332
Q ss_pred ------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 227 ------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
....+|+.|+|||++.+..++.++|||||||++|+|++|..|++..... ...............+...+.
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 259 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPD 259 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT----TTHHHHHHTTCCCCCCTTCCH
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH----HHHHHHHhcCCCCCCCccCCH
Confidence 2345678899999999889999999999999999999976665433111 111111111122233444566
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 260 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 260 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 78999999999999999999999999998764
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=361.51 Aligned_cols=255 Identities=16% Similarity=0.133 Sum_probs=199.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-----------ChhHHHHHHHHHhcCCCCCccceEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----------DPKQFADEAWGVGKLRHKRLANLIGY 138 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~ 138 (512)
..|.+++.||+|+||.||+|.+..+..++..||||++...... ....+.+|+.++..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 4577888999999999999999865556788999998765321 11346788999999999999999999
Q ss_pred Eee----CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC--CC
Q 010340 139 CCD----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG--DP 212 (512)
Q Consensus 139 ~~~----~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~--~~ 212 (512)
+.. ....++||||+ +++|.+++.. .+.+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcE
Confidence 988 77899999999 9999999973 348999999999999999999999999 99999999999998777 99
Q ss_pred eeecccCccccCCC-----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc
Q 010340 213 RLSCFGLMKNSRDG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN 281 (512)
Q Consensus 213 kl~Dfg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~ 281 (512)
||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||............
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999754321 2346899999999999888999999999999999999999887542111110000
Q ss_pred hhhhcccccCCCCCH---------HHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 282 ILHLMDSHLEGNFSS---------EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 282 ~~~~~~~~~~~~~~~---------~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.... .....+. ..+..+.+++.+||..||.+|||+.+|++.|+.+..
T Consensus 273 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTN----LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHH----HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHh----hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 0000 0011111 345578999999999999999999999999988653
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=356.30 Aligned_cols=253 Identities=17% Similarity=0.181 Sum_probs=208.9
Q ss_pred CHHHHHHHhcCC-CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--------ChhHHHHHHHHHhcCC
Q 010340 58 SLADLRAATNNF-SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------DPKQFADEAWGVGKLR 128 (512)
Q Consensus 58 ~~~~~~~~~~~f-~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~ 128 (512)
.++.+......| ..|.+++.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.+++.++
T Consensus 11 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 87 (335)
T 3dls_A 11 ELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKE---KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE 87 (335)
T ss_dssp ECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETT---TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC
T ss_pred cccccccCCcccccceEEEeEEEecCCEEEEEEEECC---CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC
Confidence 333444444333 346678899999999999999987 8899999999865432 2346888999999999
Q ss_pred CCCccceEEEEeeCCeeEEEEEccCCC-CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec
Q 010340 129 HKRLANLIGYCCDGDERLLVAEYMPND-TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (512)
Q Consensus 129 h~niv~l~~~~~~~~~~~lv~E~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~ 207 (512)
||||+++++++.+.+..++||||+.+| +|.+++. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++
T Consensus 88 h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 88 HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIA 164 (335)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC
T ss_pred CCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEc
Confidence 999999999999999999999999777 9999997 4567999999999999999999999999 99999999999999
Q ss_pred CCCCCeeecccCccccCCC---CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchh
Q 010340 208 ENGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~ 283 (512)
.++.+||+|||++...... ....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||....
T Consensus 165 ~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---------- 234 (335)
T 3dls_A 165 EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE---------- 234 (335)
T ss_dssp TTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG----------
T ss_pred CCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH----------
Confidence 9999999999999865543 24568999999999988776 789999999999999999998865321
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....... ..+...++.+.+|+.+||+.||++|||+.+++++-+
T Consensus 235 ~~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 235 ETVEAAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp GGTTTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred HHHhhcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 1111111 122234567889999999999999999999999854
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-45 Score=351.58 Aligned_cols=255 Identities=15% Similarity=0.128 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 148 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+.+|+.++..+ +|+||+++++++.+....++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLL---NNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECC---CCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 356788899999999999999876 78999999986543 345789999999999 899999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC-----CeeecccCcccc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-----PRLSCFGLMKNS 223 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfg~a~~~ 223 (512)
|||+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..
T Consensus 85 ~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 85 IDLL-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp EECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred EEec-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 9999 9999999975 3456999999999999999999999999 999999999999987765 999999999765
Q ss_pred CCC-----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhH--HHHhccchhhhccccc
Q 010340 224 RDG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHAL--DMIRGKNILHLMDSHL 290 (512)
Q Consensus 224 ~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~--~~~~~~~~~~~~~~~~ 290 (512)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 241 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence 432 344689999999999998999999999999999999999988754210 0000000000000000
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 291 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.......+++.+.+++.+||+.||.+|||+.+|++.|+.+..
T Consensus 242 ~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 242 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 001112345678899999999999999999999999988754
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=356.66 Aligned_cols=256 Identities=20% Similarity=0.304 Sum_probs=209.7
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
.+.+++.||+|+||.||+|.+.. ...+++.||||++...... ..+.+.+|+.++.++ +||||+++++++.+.+..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 103 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcE
Confidence 56678889999999999998632 2226789999999865432 246799999999999 9999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWEN----------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 210 (512)
+||||+++|+|.+++..... ..+++..++.++.||+.||.|||+++ ++||||||+|||++.++
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~ 182 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGR 182 (313)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTT
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCC
Confidence 99999999999999975332 25899999999999999999999999 99999999999999999
Q ss_pred CCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchh
Q 010340 211 DPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~ 283 (512)
.+||+|||++....... ...+|+.|+|||++.+..++.++|||||||++|+|+| |+.|+...... ....
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~ 258 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKFY 258 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----HHHH
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----hHHH
Confidence 99999999998654432 2346788999999988899999999999999999999 88765432111 1111
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
..+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 222222233334456677899999999999999999999999998765
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=369.37 Aligned_cols=254 Identities=19% Similarity=0.154 Sum_probs=204.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
...++.+++.||+|+||.||+++.+. +++.||||++++... ...+.+.+|+.++..++||||+++++++.+.+.
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~---~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 135 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQ---TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY 135 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence 34567788899999999999999987 789999999975321 123458899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.+|||||++||+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 136 ~~lVmE~~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~ 213 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213 (412)
T ss_dssp EEEEECCCCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEcCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheecc
Confidence 9999999999999999974 2347999999999999999999999999 9999999999999999999999999998654
Q ss_pred CCC-----ccccCcccCCccccc-------CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC
Q 010340 225 DGK-----SYSTNLAYTPPEYLR-------NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 225 ~~~-----~~~~t~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
... ..+||+.|+|||++. +..++.++|||||||++|||++|+.||......... ..+.........+
T Consensus 214 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-~~i~~~~~~~~~p 292 (412)
T 2vd5_A 214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY-GKIVHYKEHLSLP 292 (412)
T ss_dssp TTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHTHHHHCCCC
T ss_pred CCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH-HHHHhcccCcCCC
Confidence 432 357899999999997 356899999999999999999999887654222111 1111100000111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCC---CChHHHHHHhc
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRER---PNTKDLVSTLA 328 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~R---ps~~~vl~~L~ 328 (512)
..+...++.+.+||.+||. +|.+| |++.++++|-.
T Consensus 293 ~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 293 LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp ----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence 1223456778999999999 99998 58999988743
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=358.11 Aligned_cols=253 Identities=19% Similarity=0.223 Sum_probs=195.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
.+..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++.+....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTV---TNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETT---TTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECC---CCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 34567889999999999999999887 88999999997654322 35678999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec-----CCCCCeeecccCc
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-----ENGDPRLSCFGLM 220 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~-----~~~~~kl~Dfg~a 220 (512)
+|||||+++ +|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++
T Consensus 109 ~lv~e~~~~-~L~~~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEEECCSE-EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEEecCCC-CHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 999999975 9999997 4456999999999999999999999999 99999999999994 4556999999998
Q ss_pred cccCC----CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc------
Q 010340 221 KNSRD----GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH------ 289 (512)
Q Consensus 221 ~~~~~----~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~------ 289 (512)
+.... .....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||........... +.......
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK-IFEVLGLPDDTTWP 263 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHHHCCCCTTTST
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHH-HHHHhCCCchhhhh
Confidence 76432 23456799999999998754 89999999999999999999988764322111000 00000000
Q ss_pred -------cCCC------------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 290 -------LEGN------------FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 290 -------~~~~------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.... .+...+..+.+||.+||+.||.+|||+.++++|-.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 0000 00114567889999999999999999999998744
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=346.87 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=209.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+.+++.||+|+||.||++.+. ++..||||++..... ..+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hheeeeeEecCCCceeEEEEEec----CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 46778889999999999999986 456799999986543 4578999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 83 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CCCTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred eCCCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 99999999999975 3457899999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
....+++.|+|||++.+..++.++||||||+++|+|++ |+.|+........ ...+........+...+..+.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l~ 235 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLYKPRLASTHVY 235 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HHHHHTTCCCCCCTTSCHHHH
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH-----HHHHhcCCcCCCCccCcHHHH
Confidence 23456778999999988889999999999999999999 7766543221111 111111122233444567788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
+++.+||+.||.+|||+.+++++|+.+..
T Consensus 236 ~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 236 QIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999988753
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=350.95 Aligned_cols=246 Identities=14% Similarity=0.145 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
+|.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRL---DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcC---CCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 45678889999999999999987 78899999998654333 35788999999999 99999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC----------------
Q 010340 148 VAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---------------- 209 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~---------------- 209 (512)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC------------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 999999999999997432 267999999999999999999999999 9999999999999844
Q ss_pred ---CCCeeecccCccccCCCCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh
Q 010340 210 ---GDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL 285 (512)
Q Consensus 210 ---~~~kl~Dfg~a~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~ 285 (512)
..+||+|||++..........||+.|+|||++.+. .++.++|||||||++|+|++|.+++..... ...+
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-------~~~~ 240 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ-------WHEI 240 (289)
T ss_dssp --CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-------HHHH
T ss_pred CCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-------HHHH
Confidence 47999999999887777777899999999999765 567899999999999999999865543211 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 286 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
........+...+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 241 -~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 282 (289)
T 1x8b_A 241 -RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282 (289)
T ss_dssp -HTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred -HcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChH
Confidence 111122334455677899999999999999999999998754
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=349.92 Aligned_cols=254 Identities=21% Similarity=0.311 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..+.+.+.||+|+||.||+|.+.....++..||||++...... ..+.+.+|+.+++.++||||+++++++.+ +..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence 3566778899999999999998765446678999999865322 24679999999999999999999999875 457899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 91 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 91 MELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp EECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 999999999999964 3456999999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
....+|+.|+|||++.+..++.++|||||||++|+|+| |+.||...... .....+........+..+++.+
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 243 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEKGDRLPKPDLCPPVL 243 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHHTCCCCCCTTCCHHH
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhcCCCCCCCCCCCHHH
Confidence 23356788999999988889999999999999999998 98776532111 1111111112223344556778
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+++.+||..||.+|||+.+++++|+.+.
T Consensus 244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 99999999999999999999999998764
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=351.15 Aligned_cols=259 Identities=17% Similarity=0.203 Sum_probs=203.6
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeC
Q 010340 66 TNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDG 142 (512)
Q Consensus 66 ~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 142 (512)
...+..|.+++.||+|+||.||+|.+.. +++.||||++......+ .+.+.+|+.++..++||||+++++++...
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTV---RERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID 106 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETT---TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcC---CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC
Confidence 3446788899999999999999999987 78899999998654333 25689999999999999999999999999
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
+..++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++..
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred CeEEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 999999999999999999974 457999999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC-----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 223 SRDG-----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 223 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
.... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||.......... .+..... .....+..
T Consensus 184 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~--~~~~~~~~ 260 (309)
T 2h34_A 184 TTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGA-HINQAIP--RPSTVRPG 260 (309)
T ss_dssp -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHH-HHHSCCC--CGGGTSTT
T ss_pred ccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHH-HhccCCC--CccccCCC
Confidence 5432 24568999999999998899999999999999999999998876543321111 1111000 01122344
Q ss_pred HHHHHHHHHHHhhccCCCCCC-ChHHHHHHhccccCC
Q 010340 298 EATVVFDLASRCLQYEPRERP-NTKDLVSTLAPLQNR 333 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rp-s~~~vl~~L~~~~~~ 333 (512)
.+..+.+++.+||+.||++|| ++.++++.|+.....
T Consensus 261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 556788999999999999999 999999999877644
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=353.42 Aligned_cols=258 Identities=21% Similarity=0.317 Sum_probs=207.2
Q ss_pred ccccccCCCCCCCeEEEEEEcC-CCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeC--CeeEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLL 147 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 147 (512)
+.+++.||+|+||.||+|.+.. ...+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+. ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 5678899999999999998532 122789999999985543 2346799999999999999999999999876 66899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 103 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 9999999999999964 4456999999999999999999999999 9999999999999999999999999997654332
Q ss_pred -------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH----------Hhccchhhhccccc
Q 010340 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM----------IRGKNILHLMDSHL 290 (512)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~----------~~~~~~~~~~~~~~ 290 (512)
...+|..|+|||++.+..++.++|||||||++|+|+||..|+....... .........+....
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (302)
T 4e5w_A 181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260 (302)
T ss_dssp CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC
T ss_pred cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC
Confidence 3456788999999998899999999999999999999987643221110 01111122222223
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 291 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 291 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
....+...++.+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 261 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 33445566778999999999999999999999999998764
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=355.30 Aligned_cols=245 Identities=18% Similarity=0.190 Sum_probs=205.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------ChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+...
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cEEEeeEeeecCCEEEEEEEECC---CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 46678889999999999999987 7889999999765432 24679999999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC----CCeeecccCc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLM 220 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg~a 220 (512)
.++||||+++++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++ .+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEEECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999997 4567999999999999999999999999 99999999999999887 7999999999
Q ss_pred cccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC--
Q 010340 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295 (512)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (512)
...... ....||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+.. ....++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~i~~--~~~~~~~~ 240 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANITS--VSYDFDEE 240 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHT--TCCCCCHH
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHh--cccccChh
Confidence 865443 3456899999999999889999999999999999999999887543221111 01110 011122
Q ss_pred --HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 296 --SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 296 --~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
...+..+.+||.+||..||.+|||+.+++++-
T Consensus 241 ~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 241 FFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred hhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 22356688999999999999999999999873
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=358.16 Aligned_cols=243 Identities=19% Similarity=0.238 Sum_probs=183.6
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEEEEccCC
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
+.||+|+||.||+|.+.. +++.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++
T Consensus 17 ~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKK---SNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp CCSEEETTEEEEEEEETT---TCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CccccCCCeEEEEEEECC---CCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 578999999999999987 7889999999754 2467889999999996 99999999999999999999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC---CCeeecccCccccCCC----C
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLMKNSRDG----K 227 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~----~ 227 (512)
|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... .
T Consensus 91 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 167 (325)
T 3kn6_A 91 GELFERIK--KKKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167 (325)
T ss_dssp CBHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccc
Confidence 99999997 4567999999999999999999999999 99999999999997665 7999999999765432 3
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC--CC----HHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN--FS----SEEATV 301 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~ 301 (512)
...+|+.|+|||++.+..++.++|||||||++|+|++|+.||...... ........+........ ++ ...++.
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 246 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS-LTCTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHTSCHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccc-cccccHHHHHHHHHcCCCCCCcccccCCCHH
Confidence 456799999999999889999999999999999999999887543211 11111112222211111 11 235677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+||.+||+.||.+|||+.+++++-+
T Consensus 247 ~~~li~~~L~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 247 AKDLIQGLLTVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp HHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred HHHHHHHHCCCChhHCCCHHHHhcChh
Confidence 999999999999999999999987744
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=372.06 Aligned_cols=252 Identities=17% Similarity=0.173 Sum_probs=185.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeC-----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 142 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+|+.++|||||++++++...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 129 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKL---EKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF 129 (458)
T ss_dssp TTEEECCC-------CEEEEEECC-----CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred CCeEEeeEeeecCCeEEEEEEECC---CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence 357788999999999999999987 7889999999754322 235789999999999999999999999543
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
..+++||||+ +++|.+++. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 130 DELYVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp CCEEEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred ceEEEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchh
Confidence 5689999998 569999996 5567999999999999999999999999 99999999999999999999999999986
Q ss_pred cCC-------------------------------CCccccCcccCCcccc-cCCCCCCCCcEEehHHHHHHHHh------
Q 010340 223 SRD-------------------------------GKSYSTNLAYTPPEYL-RNGRVTPESVIFSFGTVLLDLLS------ 264 (512)
Q Consensus 223 ~~~-------------------------------~~~~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~~l~ellt------ 264 (512)
... ....+||+.|+|||++ .+..++.++||||||||+|||+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 531 1234679999999986 45669999999999999999999
Q ss_pred -----CCCCCChhhHHH-------------------Hhccchhhh-----------------------cccccCC---CC
Q 010340 265 -----GKHIPPSHALDM-------------------IRGKNILHL-----------------------MDSHLEG---NF 294 (512)
Q Consensus 265 -----g~~~~~~~~~~~-------------------~~~~~~~~~-----------------------~~~~~~~---~~ 294 (512)
|+++|+....-. .....+..+ +...... ..
T Consensus 286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (458)
T 3rp9_A 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365 (458)
T ss_dssp SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence 554443321000 000000000 0000000 00
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+..++.+.+||.+||..||.+|||+.++++|-.
T Consensus 366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~ 399 (458)
T 3rp9_A 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPF 399 (458)
T ss_dssp STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred CCCCCHHHHHHHHHHhccCccccCCHHHHhcCHh
Confidence 1233567889999999999999999999999854
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-45 Score=348.95 Aligned_cols=246 Identities=18% Similarity=0.280 Sum_probs=206.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee---------
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--------- 141 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 141 (512)
.+.+++.||+|+||.||+|.+.. +++.||||++.... +.+.+|+++++.++||||+++++++..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 12 DFKEIELIGSGGFGQVFKAKHRI---DGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HEEEEEEEECSSSCCEEEEEETT---TCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccceeeeeccCCceEEEEEEEcC---CCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 35678889999999999999987 78899999997543 568899999999999999999999864
Q ss_pred -------CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCee
Q 010340 142 -------GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214 (512)
Q Consensus 142 -------~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 214 (512)
....++||||+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEE
Confidence 345899999999999999997655678999999999999999999999999 999999999999999999999
Q ss_pred ecccCccccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC
Q 010340 215 SCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE 291 (512)
Q Consensus 215 ~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (512)
+|||++...... ....+|+.|+|||++.+..++.++|||||||++|+|++|..|+.... .. ...+..
T Consensus 164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~-----~~~~~~---- 233 (284)
T 2a19_B 164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-KF-----FTDLRD---- 233 (284)
T ss_dssp CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-HH-----HHHHHT----
T ss_pred CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-HH-----HHHhhc----
Confidence 999998765443 34568999999999998889999999999999999999997653221 11 111111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
...+...+..+.+++.+||+.||.+|||+.+++++|+.+...+
T Consensus 234 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 234 GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 1223334556889999999999999999999999999887654
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=364.35 Aligned_cols=256 Identities=14% Similarity=0.135 Sum_probs=200.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCC-----------ChhHHHHHHHHHhcCCCCCccceEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-----------DPKQFADEAWGVGKLRHKRLANLIG 137 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 137 (512)
.|.+++.||+|+||.||+|.+..+. ..++.||||++...... ....+..|+..+..++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 5778889999999999999987632 13578999998754311 0123455666778888999999999
Q ss_pred EEeeC----CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec--CCCC
Q 010340 138 YCCDG----DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD--ENGD 211 (512)
Q Consensus 138 ~~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~ 211 (512)
++... ...+|||||+ |++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++ .++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTC
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCe
Confidence 99774 4589999999 9999999975 4567999999999999999999999999 99999999999999 8899
Q ss_pred CeeecccCccccCCC-----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH---
Q 010340 212 PRLSCFGLMKNSRDG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI--- 277 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~--- 277 (512)
+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.....+..
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~ 272 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence 999999999754321 234589999999999998999999999999999999999988764211100
Q ss_pred -----hccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 278 -----RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 278 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
....+..+.+..+. ...++..+.+|+..||+.||.+||++.+|++.|+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 273 DSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp HHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 00112222222211 12235668899999999999999999999999987654
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-45 Score=350.40 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=207.2
Q ss_pred cccccc-cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVS-ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~-~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.+.+++ .||+|+||.||+|.+.... ++..||||++...... ..+.+.+|+.+++.++||||+++++++ ..+..++|
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCC-CcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 455666 8999999999999875432 5788999999865322 245789999999999999999999999 55678999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999964 4567999999999999999999999999 9999999999999999999999999997654322
Q ss_pred ------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
...+|+.|+|||++.+..++.++|||||||++|+|+| |+.||...... .....+........+..+++
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~ 240 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFIEQGKRMECPPECPP 240 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHHHHHTTCCCCCCTTCCH
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHhcCCcCCCCCCcCH
Confidence 2345788999999988889999999999999999999 88776532211 11111222223344556677
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 899999999999999999999999999987643
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=357.25 Aligned_cols=256 Identities=18% Similarity=0.267 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+|.+++.||+|+||.||+|.+..... ....||+|.+..... ...+.+.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 457788999999999999999876221 122468888765432 34578999999999999999999999998754 789
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 94 v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999975 4567999999999999999999999999 9999999999999999999999999997654321
Q ss_pred ------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ...+...+........+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTI 246 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHcCCCCCCCccCCH
Confidence 2345778999999999999999999999999999999 887764321 1122222333333344556677
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999988754
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-45 Score=376.22 Aligned_cols=251 Identities=17% Similarity=0.218 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..+.+++.||+|+||.||+|+++. +++.||||++.+.. ......+.+|+.+|..++||||+++++++.+...++
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~---tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKA---TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence 456677889999999999999987 78999999997542 233467899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 147 LVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
|||||++||+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999997532 457999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 225 DG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 225 ~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
.. ....||+.|+|||++.+..++.++|||||||++|||+||+.||...............+.. ....++...+.
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~ 418 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE--QAVTYPDKFSP 418 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH--CCCCCCTTSCH
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh--cccCCCcccCH
Confidence 32 2357999999999999989999999999999999999999887643110000000011111 12234556677
Q ss_pred HHHHHHHHhhccCCCCCCCh-----HHHHHH
Q 010340 301 VVFDLASRCLQYEPRERPNT-----KDLVST 326 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~-----~~vl~~ 326 (512)
.+.+||.+||+.||.+||++ .++++|
T Consensus 419 ~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp HHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred HHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 88999999999999999975 666665
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=349.40 Aligned_cols=250 Identities=24% Similarity=0.363 Sum_probs=200.7
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeC-CeeEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG-DERLL 147 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~l 147 (512)
+..+.+++.||+|+||.||++.+ +++.||||++.... ..+.+.+|+.+++.++||||+++++++.+. +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-----TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-----cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 45677889999999999999987 46789999997543 457899999999999999999999997654 47899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred EEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 999999999999997543345899999999999999999999999 999999999999999999999999998765433
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....+++.|+|||++.+..++.++||||||+++|+|+| |+.|+..... ......+........+...++.+.++
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~l 246 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPDGCPPAVYEV 246 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTTCCCCCCTTCCHHHHHH
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCcccCCHHHHHH
Confidence 33457889999999988889999999999999999998 8877643211 11111122222334455567789999
Q ss_pred HHHhhccCCCCCCChHHHHHHhcccc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+.+||+.||.+|||+.++++.|+.+.
T Consensus 247 i~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 247 MKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 99999999999999999999998775
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=363.00 Aligned_cols=266 Identities=19% Similarity=0.196 Sum_probs=207.7
Q ss_pred ccccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC---
Q 010340 52 PAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR--- 128 (512)
Q Consensus 52 ~~~~~~~~~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--- 128 (512)
.....|++.+..... ..|.+++.||+|+||.||+|.+.. +++.||||++.... .....+..|+.++..+.
T Consensus 20 ~~~~~~~~~~g~~~~---~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~ 92 (360)
T 3llt_A 20 DEIVHFSWKKGMLLN---NAFLVIRKMGDGTFGRVLLCQHID---NKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDD 92 (360)
T ss_dssp CGGGSCCCCTTCEET---TTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCS
T ss_pred ccceeeeeecceEec---CEEEEEEEEcccCCeEEEEEEECC---CCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccC
Confidence 344445544332222 346688899999999999999987 78899999997432 12356788999999996
Q ss_pred --CCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee
Q 010340 129 --HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206 (512)
Q Consensus 129 --h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill 206 (512)
||||+++++++...+..++||||+ +++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||+
T Consensus 93 ~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll 170 (360)
T 3llt_A 93 INNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILL 170 (360)
T ss_dssp TTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEE
T ss_pred CCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEE
Confidence 999999999999999999999999 889999998655567999999999999999999999999 9999999999999
Q ss_pred cC-------------------------CCCCeeecccCccccCC-CCccccCcccCCcccccCCCCCCCCcEEehHHHHH
Q 010340 207 DE-------------------------NGDPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLL 260 (512)
Q Consensus 207 ~~-------------------------~~~~kl~Dfg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 260 (512)
+. ++.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp SCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 75 78999999999986543 34567899999999999999999999999999999
Q ss_pred HHHhCCCCCChhhHHHHhccchhhh--------------------ccc-ccCCCCC--------------------HHHH
Q 010340 261 DLLSGKHIPPSHALDMIRGKNILHL--------------------MDS-HLEGNFS--------------------SEEA 299 (512)
Q Consensus 261 elltg~~~~~~~~~~~~~~~~~~~~--------------------~~~-~~~~~~~--------------------~~~~ 299 (512)
+|+||+.||......... ..+... +.. .....++ ....
T Consensus 251 ell~g~~pf~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (360)
T 3llt_A 251 ELYTGSLLFRTHEHMEHL-AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329 (360)
T ss_dssp HHHHSSCSCCCSSHHHHH-HHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred HHHHCCCCCCCCcHHHHH-HHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence 999999887543111000 000000 000 0000000 0012
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+.+.+||.+||+.||++|||+.+++++-
T Consensus 330 ~~l~~li~~~L~~dP~~Rpta~elL~hp 357 (360)
T 3llt_A 330 ELFCDFLYSILQIDPTLRPSPAELLKHK 357 (360)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence 5677999999999999999999998763
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=347.77 Aligned_cols=249 Identities=22% Similarity=0.287 Sum_probs=206.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+.+|.+++.||+|+||.||+|.+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.+....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV 84 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEcc---CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence 3467788899999999999999987 78889999986532 12345789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 85 ~lv~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 85 YLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp EEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 999999999999999973 356999999999999999999999999 99999999999999999999999998865443
Q ss_pred C--CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 226 G--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 226 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
. ....+|+.|+|||++.+..++.++||||||+++|+|++|..||.......... .+. .....++...+..+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~ 235 (279)
T 3fdn_A 162 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK-RIS-----RVEFTFPDFVTEGAR 235 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HHH-----HTCCCCCTTSCHHHH
T ss_pred ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHH-HHH-----hCCCCCCCcCCHHHH
Confidence 2 34578999999999998889999999999999999999998875432211110 011 112233445567788
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+|+.+||+.||.+|||+.+++++-.-
T Consensus 236 ~li~~~l~~~p~~Rps~~e~l~h~~~ 261 (279)
T 3fdn_A 236 DLISRLLKHNPSQRPMLREVLEHPWI 261 (279)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHHCHHH
T ss_pred HHHHHHhccChhhCCCHHHHhhCccc
Confidence 99999999999999999999998653
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=351.17 Aligned_cols=257 Identities=19% Similarity=0.267 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCC----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 143 (512)
..+.+++.||+|+||.||+|.+.....++..||||++....... .+.+.+|+.++++++||||+++++++.+..
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 35667788999999999999987765567899999998654332 356899999999999999999999998754
Q ss_pred -eeEEEEEccCCCCHHhhhhh----cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeeccc
Q 010340 144 -ERLLVAEYMPNDTLAKHLFH----WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (512)
Q Consensus 144 -~~~lv~E~~~~g~L~~~l~~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 218 (512)
..++||||+++|+|.+++.. .....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecC
Confidence 35999999999999999853 23467999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccC
Q 010340 219 LMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLE 291 (512)
Q Consensus 219 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (512)
++...... ....+++.|+|||++.+..++.++|||||||++|+|++ |..|+..... ......+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-----HEMYDYLLHGHR 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHTTCC
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----HHHHHHHHcCCC
Confidence 98765332 23356788999999998899999999999999999999 6655543211 111111111222
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
...+..++..+.+++.+||..||.+|||+.+++++|+.+..
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 33445566779999999999999999999999999988753
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=360.23 Aligned_cols=248 Identities=18% Similarity=0.218 Sum_probs=201.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.|.+++.||+|+||.||+|.++. +++.||||++..... .+.+|++++.++ +||||+++++++.+....++||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 23 GYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred cEEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46678899999999999999987 789999999976542 346788888888 7999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC----CCCeeecccCccccCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN----GDPRLSCFGLMKNSRD 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfg~a~~~~~ 225 (512)
||++||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||+..+ +.+||+|||+++....
T Consensus 96 E~~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 96 ELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred eCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 9999999999997 4567999999999999999999999999 9999999999998432 3499999999986543
Q ss_pred C----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc--cccCCCCCHHHH
Q 010340 226 G----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD--SHLEGNFSSEEA 299 (512)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 299 (512)
. ....||+.|+|||++.+..++.++|||||||++|||++|..||........ ......+.. ...........+
T Consensus 173 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~s 251 (342)
T 2qr7_A 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP-EEILARIGSGKFSLSGGYWNSVS 251 (342)
T ss_dssp TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH-HHHHHHHHHCCCCCCSTTTTTSC
T ss_pred CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH-HHHHHHHccCCcccCccccccCC
Confidence 2 245689999999999888899999999999999999999988754211000 000001111 111122234566
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
..+.+||.+||..||++|||+.++++|-+-
T Consensus 252 ~~~~~li~~~L~~dP~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 252 DTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281 (342)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence 778999999999999999999999988554
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=345.85 Aligned_cols=245 Identities=20% Similarity=0.210 Sum_probs=205.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.+++.||+|+||.||+|.+.. ++..||+|++........+.+.+|+++++.++||||+++++++.+....++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKG---TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hEEeeeEEeecCCEEEEEEEeCC---CCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 45677889999999999999987 778899999987766677889999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee---cCCCCCeeecccCccccCCC-
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~- 226 (512)
|+++++|.+++.. ...+++..++.++.|++.||.|||+++ ++||||||+|||+ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 87 LCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred ccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 9999999999873 456999999999999999999999999 9999999999999 78899999999999765433
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH----HHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS----EEAT 300 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 300 (512)
....+|+.|+|||++.+ .++.++||||||+++|+|++|+.||......... ..+... ....+. ..++
T Consensus 164 ~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~ 236 (277)
T 3f3z_A 164 MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM----LKIREG--TFTFPEKDWLNVSP 236 (277)
T ss_dssp CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCHHHHTTSCH
T ss_pred chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhC--CCCCCchhhhcCCH
Confidence 34568999999999865 4899999999999999999999887543221111 111111 111222 3456
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+.+|+.+||+.||.+|||+.+++++-.
T Consensus 237 ~~~~li~~~l~~dp~~R~s~~~~l~h~~ 264 (277)
T 3f3z_A 237 QAESLIRRLLTKSPKQRITSLQALEHEW 264 (277)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 7899999999999999999999988743
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=381.42 Aligned_cols=246 Identities=19% Similarity=0.257 Sum_probs=203.5
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
.||+|+||.||+|.+.... ++..||||+++.... ...+.|.+|+++|+.++|||||+++++|.. +..+|||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSS-CEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCC-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6899999999999886432 567899999986543 245789999999999999999999999976 5689999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-------c
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-------S 228 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-------~ 228 (512)
+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 421 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 421 PLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp BHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred cHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999964 4567999999999999999999999999 9999999999999999999999999998654321 1
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
..+++.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+...+........+..+++.+.+||.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~ 573 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPPELYALMS 573 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----HHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 234578999999998899999999999999999998 8877654211 1122222223334456667788999999
Q ss_pred HhhccCCCCCCChHHHHHHhcccc
Q 010340 308 RCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+||+.||++||++.+|++.|+.+.
T Consensus 574 ~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 574 DCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp HTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHcCCChhHCcCHHHHHHHHHHHH
Confidence 999999999999999999998754
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=355.20 Aligned_cols=253 Identities=17% Similarity=0.193 Sum_probs=197.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---hHHHHHHHHHhcCCCCCccceEEEEeeCCe--
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDE-- 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 144 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++......+. ..+.+|+.++.+++||||+++++++.....
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 88 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLR---DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG 88 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE
T ss_pred CcEEEEEEEccCCCEEEEEEEECC---CCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC
Confidence 357788899999999999999987 789999999987654442 468899999999999999999999876543
Q ss_pred --eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 145 --RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 145 --~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
.++||||++|++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 89 ~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 89 PLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cccEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 4999999999999999973 457999999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC-------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 223 SRDG-------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 223 ~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
.... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||................. .......
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~ 243 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARH 243 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--CCHHHHS
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC--CCccccc
Confidence 4332 234689999999999998999999999999999999999988764322111111000000 0000001
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHH-hccc
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVST-LAPL 330 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~-L~~~ 330 (512)
...+..+.+|+.+||+.||.+||+..+++.+ |..+
T Consensus 244 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 2245678899999999999999977766554 4444
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-45 Score=358.30 Aligned_cols=247 Identities=18% Similarity=0.184 Sum_probs=207.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..|.+++.||+|+||.||++.+.. +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence 457788899999999999999987 78899999997654333 356889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
+||||+++++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 118 lv~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999999863 457999999999999999999999999 99999999999999999999999999976542
Q ss_pred ---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 ---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||......... ..+... ...++...+..+
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~~--~~~~~~~~~~~~ 268 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY----LRIKKN--EYSIPKHINPVA 268 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHT--CCCCCTTSCHHH
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH----HHHhcC--CCCCCccCCHHH
Confidence 22456899999999999888999999999999999999999887543221110 111111 112334455678
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+||.+||+.||.+|||+.+++++-.
T Consensus 269 ~~li~~~l~~dp~~Rps~~ell~~~~ 294 (335)
T 2owb_A 269 ASLIQKMLQTDPTARPTINELLNDEF 294 (335)
T ss_dssp HHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred HHHHHHHccCChhHCcCHHHHhcCcc
Confidence 89999999999999999999998744
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=346.93 Aligned_cols=251 Identities=18% Similarity=0.178 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcC---CCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 456788899999999999999987 78899999997654332 3568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC---CeeecccCccccC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGLMKNSR 224 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfg~a~~~~ 224 (512)
||||+++++|.+.+.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++. +||+|||++....
T Consensus 83 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999998873 456999999999999999999999999 999999999999976655 9999999997655
Q ss_pred CCC---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 225 DGK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 225 ~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
... ...||+.|+|||++.+..++.++||||||+++|+|++|+.||................. ..........++.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 237 (284)
T 3kk8_A 160 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY--DYPSPEWDTVTPE 237 (284)
T ss_dssp SSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTTTTSCHH
T ss_pred cCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccc--cCCchhhcccCHH
Confidence 432 35789999999999998999999999999999999999988765422211111100000 0111112345567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+|+.+||+.||++|||+.+++++-.
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 238 AKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred HHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 889999999999999999999999754
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=349.72 Aligned_cols=250 Identities=18% Similarity=0.195 Sum_probs=204.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.+++.||+|+||.||++.+.. +++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRL---TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceeeeeccCCCCceEEEEEECC---CCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 46678889999999999999987 788999999986654455679999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee---cCCCCCeeecccCccccCCC-
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~- 226 (512)
|+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 87 LVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp CCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred cCCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 9999999999863 456899999999999999999999999 9999999999999 78899999999998765432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+.... ...........+..+.+|
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~i~~~~-~~~~~~~~~~~~~~~~~l 241 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFE-KIKEGY-YEFESPFWDDISESAKDF 241 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHCC-CCCCTTTTTTSCHHHHHH
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHHcCC-CCCCccccccCCHHHHHH
Confidence 23468999999999998899999999999999999999998875432211110 000000 011122234456778999
Q ss_pred HHHhhccCCCCCCChHHHHHHhc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+||..||.+|||+.+++++-.
T Consensus 242 i~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 242 ICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp HHHHHCSSTTTSCCHHHHHTSHH
T ss_pred HHHHcCCChhHCcCHHHHhcCcc
Confidence 99999999999999999998754
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-45 Score=379.43 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=209.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.+.+++.||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+||||
T Consensus 268 ~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 268 SLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GEEEEEEEEECSSEEEEEEEETT----TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhheecccCCCeEEEEEEECC----CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 45677889999999999999873 4569999998654 346789999999999999999999999976 67899999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
|+++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 999999999997544456999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....++..|+|||++.+..++.++|||||||+||||+| |+.|+...... .+...+........+..++..+.+
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~ 495 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPECPESLHD 495 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHH
Confidence 23345788999999998899999999999999999999 77766543211 111122222233445566778999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
||.+||+.||++|||+.+|++.|+.+...
T Consensus 496 li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 496 LMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 99999999999999999999999987643
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=353.57 Aligned_cols=256 Identities=20% Similarity=0.282 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee----CCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 145 (512)
..|.+++.||+|+||.||++.... +++.||||++........+.+.+|+.+++.++||||+++++++.. ....
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLH---DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETT---TCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecC---CCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 457788999999999999999977 788999999876443345679999999999999999999999973 3478
Q ss_pred EEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 146 LLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
++||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++...
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999999642 3567999999999999999999999999 999999999999999999999999988754
Q ss_pred CCC-------------CccccCcccCCcccccCCC---CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc
Q 010340 224 RDG-------------KSYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287 (512)
Q Consensus 224 ~~~-------------~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~ 287 (512)
... ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... ..........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~ 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ---KGDSVALAVQ 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH---TTSCHHHHHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc---ccchhhHHhh
Confidence 321 1234689999999997554 68899999999999999999987643211 1111111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 288 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.......+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 262 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 262 NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 122222334556779999999999999999999999999998764
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=355.56 Aligned_cols=255 Identities=23% Similarity=0.293 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceE--EEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRW--IAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~--vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
+.+.+++.||+|+||.||+|.+.. ++.. ||||.+..... ...+.+.+|++++.++ +||||+++++++.+.+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEE---TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEcc---CCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 356688889999999999999886 5554 59999875332 2346799999999999 999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYV 180 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGC
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCe
Confidence 99999999999999997422 247999999999999999999999999 999999999999999999
Q ss_pred CeeecccCccccCC---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcc
Q 010340 212 PRLSCFGLMKNSRD---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMD 287 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 287 (512)
+||+|||+++.... .....+++.|+|||++.+..++.++|||||||++|+|+| |+.||........ ...+.
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~-----~~~~~ 255 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-----YEKLP 255 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HHHGG
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH-----HHHhh
Confidence 99999999874332 223456789999999988889999999999999999998 8877654322111 11111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 288 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.......+...+..+.+|+.+||+.||.+|||+.+++++|..+...
T Consensus 256 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 256 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 2222334455667899999999999999999999999999987643
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=359.02 Aligned_cols=257 Identities=20% Similarity=0.301 Sum_probs=208.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCC----CCCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDG----NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~----~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 143 (512)
..+.+++.||+|+||.||+|.+... ..++..||||++...... ..+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 3566888999999999999998632 125678999999865322 235689999999999 9999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 209 (512)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 193 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCC
Confidence 9999999999999999997532 134899999999999999999999999 9999999999999999
Q ss_pred CCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccch
Q 010340 210 GDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNI 282 (512)
Q Consensus 210 ~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~ 282 (512)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|+| |+.|+....... +
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~ 268 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-----L 268 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----H
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-----H
Confidence 99999999999765432 23345788999999988889999999999999999999 887765432211 1
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 283 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
...+........+..++..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111122233445566778999999999999999999999999998764
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=348.66 Aligned_cols=253 Identities=20% Similarity=0.284 Sum_probs=193.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.+.+++.||+|+||.||+|.+.. .||||+++...... .+.+.+|+.+++.++||||+++++++ .....++|
T Consensus 25 ~y~~~~~lG~G~~g~Vy~~~~~~------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 25 QITVGQRIGSGSFGTVYKGKWHG------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp SCEEEEEEEECSSEEEEEEESSS------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred ceeeeeEecCCCCeEEEEEEEcC------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 46678899999999999998643 39999997654332 35689999999999999999999976 45668999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC---
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--- 225 (512)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 98 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp EECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999999964 4567999999999999999999999999 99999999999999999999999999875432
Q ss_pred ---CCccccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 226 ---GKSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
.....||+.|+|||++. +..++.++|||||||++|+|++|+.||............................++
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCC
Confidence 12356899999999986 566888999999999999999999887542111110000000000011112234566
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
+.+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 256 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 256 KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 789999999999999999999999999988753
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=353.26 Aligned_cols=250 Identities=18% Similarity=0.154 Sum_probs=198.3
Q ss_pred cccc-ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIV-SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i-~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 149 (512)
|.++ +.||+|+||.||+|.+.. +++.||||++..........+.+|+.++.++ +||||+++++++.+.+..++||
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLI---TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSS---SCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEecCceecCCceEEEEEEEEcC---CCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4454 568999999999999877 7889999999876655567899999999985 7999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC---CeeecccCccccCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGLMKNSRDG 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfg~a~~~~~~ 226 (512)
||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 91 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 91 EKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred EcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999999974 457999999999999999999999999 999999999999987766 999999998754321
Q ss_pred -----------CccccCcccCCcccccC-----CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH-----Hh-----cc
Q 010340 227 -----------KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM-----IR-----GK 280 (512)
Q Consensus 227 -----------~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~-----~~-----~~ 280 (512)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .. ..
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 13458999999999975 458999999999999999999998875421000 00 00
Q ss_pred chhhhcccccCCCCCH----HHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 281 NILHLMDSHLEGNFSS----EEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 281 ~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+...+... ...++. ..+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 248 ~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 298 (316)
T 2ac3_A 248 MLFESIQEG-KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298 (316)
T ss_dssp HHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred HHHHHHhcc-CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence 000111000 112222 24567899999999999999999999999744
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=353.48 Aligned_cols=256 Identities=23% Similarity=0.305 Sum_probs=209.0
Q ss_pred cccccCCCCCCCeEEEEEEcC-CCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeC--CeeEEE
Q 010340 73 FIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 148 (512)
.+++.||+|+||.||++.+.. ...+++.||||++....... .+.+.+|+++++.++||||+++++++.+. ..+++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 578899999999999987542 22378899999998653211 35689999999999999999999999884 678999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++|+|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 114 ~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp ECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 999999999999953 45999999999999999999999999 9999999999999999999999999998764432
Q ss_pred ------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHH----------HhccchhhhcccccC
Q 010340 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDM----------IRGKNILHLMDSHLE 291 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 291 (512)
...+|+.|+|||++.+..++.++|||||||++|+|+||+.|+....... .........+.....
T Consensus 190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (318)
T 3lxp_A 190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 269 (318)
T ss_dssp EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC
Confidence 3356788999999998889999999999999999999998765432211 111122233333334
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
...+..++..+.+||.+||+.||.+|||+.++++.|+.+..
T Consensus 270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 44556677889999999999999999999999999987753
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=367.23 Aligned_cols=253 Identities=20% Similarity=0.244 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCe
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 144 (512)
..|.+++.||+|+||.||++....+..+++.||||+++.... ...+.+.+|+.++..+ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 467788899999999999999865444789999999975431 2346688899999999 79999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.+|||||+++|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999999974 356999999999999999999999999 9999999999999999999999999987543
Q ss_pred C-----CCccccCcccCCcccccCC--CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc--ccCCCCC
Q 010340 225 D-----GKSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS--HLEGNFS 295 (512)
Q Consensus 225 ~-----~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 295 (512)
. .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .....+... .....++
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~ 286 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSEPPYP 286 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHCCCCCC
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc----chHHHHHHHHhccCCCCC
Confidence 2 2245789999999999863 4788999999999999999999887532110 000111100 1122345
Q ss_pred HHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHhcc
Q 010340 296 SEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 329 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rp-----s~~~vl~~L~~ 329 (512)
...+..+.+||.+||..||.+|| ++.+++++...
T Consensus 287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 55667788999999999999999 99999998754
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=358.11 Aligned_cols=248 Identities=19% Similarity=0.272 Sum_probs=200.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCC--CCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRH--KRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~ 145 (512)
..|.+++.||+|+||.||++.+. +++.||||++....... .+.+.+|+.+|..++| |||+++++++.+....
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 84 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 84 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECT----TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeC----CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence 35778899999999999999885 67789999997654322 3568999999999976 9999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+||||+ .+++|.+++.. ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++....
T Consensus 85 ~lv~e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 85 YMVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEECC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEEeC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 999995 57899999974 567999999999999999999999999 99999999999997 67899999999986543
Q ss_pred C------CccccCcccCCcccccC-----------CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc
Q 010340 226 G------KSYSTNLAYTPPEYLRN-----------GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 226 ~------~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
. ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .....++..
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~ 236 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDP 236 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCT
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH---HHHHHHhcC
Confidence 2 24568999999999865 668899999999999999999998875421111 112222333
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.....++...+..+.+|+.+||+.||.+|||+.+++++.+-
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~ 277 (343)
T 3dbq_A 237 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277 (343)
T ss_dssp TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence 33334444555678899999999999999999999998654
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=358.27 Aligned_cols=250 Identities=21% Similarity=0.169 Sum_probs=199.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC-----CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-----WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 103 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQ---TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYI 103 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred heeecceeeecCCeEEEEEEECC---CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeE
Confidence 45678889999999999999987 78899999987542 23346799999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhc--------------------------------------CCCCCCHHHHHHHHHHHHHHHHH
Q 010340 146 LLVAEYMPNDTLAKHLFHW--------------------------------------ENQTIEWAMRLRVALYIAEALDY 187 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~i~~~L~~ 187 (512)
++||||++||+|.+++... ....+++..++.++.||+.||.|
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~ 183 (345)
T 3hko_A 104 CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHY 183 (345)
T ss_dssp EEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence 9999999999999998421 02234678889999999999999
Q ss_pred HhcCCCccccccCccceeecCCC--CCeeecccCccccCC--------CCccccCcccCCcccccC--CCCCCCCcEEeh
Q 010340 188 CSSEGRPLYHDLNAYRVLFDENG--DPRLSCFGLMKNSRD--------GKSYSTNLAYTPPEYLRN--GRVTPESVIFSF 255 (512)
Q Consensus 188 LH~~~~iiH~Dlkp~Nill~~~~--~~kl~Dfg~a~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~sl 255 (512)
||+.+ |+||||||+|||++.++ .+||+|||++..... .....||+.|+|||++.+ ..++.++|||||
T Consensus 184 LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 262 (345)
T 3hko_A 184 LHNQG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262 (345)
T ss_dssp HHHTT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred HHHCC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence 99999 99999999999998766 899999999975422 234568999999999965 668999999999
Q ss_pred HHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC--CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 256 GTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN--FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 256 G~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
||++|||++|+.||........ ...+........ .....++.+.+||.+||+.||.+|||+.+++++-.
T Consensus 263 G~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~ 333 (345)
T 3hko_A 263 GVLLHLLLMGAVPFPGVNDADT----ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333 (345)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred HHHHHHHHHCCCCCCCCChHHH----HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence 9999999999988754322111 111111111111 11234667899999999999999999999999743
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=348.72 Aligned_cols=251 Identities=20% Similarity=0.255 Sum_probs=204.0
Q ss_pred cccccc-cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVS-ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~-~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+.+ .||+|+||.||+|.+.... +++.||||++....... .+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSS-SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCC-ceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 455666 8999999999999764322 67899999998654333 45799999999999999999999999 5677899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999974 456999999999999999999999999 9999999999999999999999999997654332
Q ss_pred -------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
...+++.|+|||++.+..++.++||||||+++|+|+| |+.|+....... +...+........+..++
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----VTAMLEKGERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCC
Confidence 2235688999999988889999999999999999999 887765432211 112222222334455667
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
..+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 78999999999999999999999999998764
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=346.15 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=209.1
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
.+..+.+++.||+|+||.||+|.+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+.+.
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 88 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQ---NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR 88 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcC---CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE
Confidence 44567788999999999999999987 78899999986532 2234679999999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 89 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 9999999999999999974 356999999999999999999999999 9999999999999999999999999987654
Q ss_pred C--CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 225 D--GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 225 ~--~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
. .....|++.|+|||++.+..++.++||||||+++|+|++|..||......... ..+.. ....++...+..+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~--~~~~~~~~~~~~~ 239 (284)
T 2vgo_A 166 SLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH----RRIVN--VDLKFPPFLSDGS 239 (284)
T ss_dssp SSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHT--TCCCCCTTSCHHH
T ss_pred ccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH----HHHhc--cccCCCCcCCHHH
Confidence 3 23457899999999999888999999999999999999999887543211111 11111 1123344556778
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.++|.+||+.||.+|||+.+++++-.
T Consensus 240 ~~li~~~l~~~p~~Rps~~~ll~h~~ 265 (284)
T 2vgo_A 240 KDLISKLLRYHPPQRLPLKGVMEHPW 265 (284)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTCHH
T ss_pred HHHHHHHhhcCHhhCCCHHHHhhCHH
Confidence 89999999999999999999998744
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=364.69 Aligned_cols=249 Identities=22% Similarity=0.292 Sum_probs=189.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCC-CCCccceEEEEeeCC--e
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLR-HKRLANLIGYCCDGD--E 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 144 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|+.++..+. ||||+++++++...+ .
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRR---TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp TTEEEEEC-------CEEEEEETT---TCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred CceEEEEEeeeCCCeEEEEEEECC---CCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 457788999999999999999987 78899999987543222 356889999999996 999999999997544 6
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
+++||||++ ++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 86 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 899999997 589999963 57999999999999999999999999 9999999999999999999999999997542
Q ss_pred C-------------------------CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh
Q 010340 225 D-------------------------GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR 278 (512)
Q Consensus 225 ~-------------------------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~ 278 (512)
. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 2 123578999999999976 56899999999999999999999887643211100
Q ss_pred ccchhhhcc------------------------------cccCCC------------CCHHHHHHHHHHHHHhhccCCCC
Q 010340 279 GKNILHLMD------------------------------SHLEGN------------FSSEEATVVFDLASRCLQYEPRE 316 (512)
Q Consensus 279 ~~~~~~~~~------------------------------~~~~~~------------~~~~~~~~~~~li~~cl~~~p~~ 316 (512)
. .+...+. ...... .....++.+.+|+.+||..||++
T Consensus 241 ~-~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 241 E-RIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp H-HHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred H-HHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 0 0000000 000000 00123567889999999999999
Q ss_pred CCChHHHHHHh
Q 010340 317 RPNTKDLVSTL 327 (512)
Q Consensus 317 Rps~~~vl~~L 327 (512)
|||+.++++|-
T Consensus 320 R~t~~e~l~Hp 330 (388)
T 3oz6_A 320 RISANDALKHP 330 (388)
T ss_dssp SCCHHHHTTST
T ss_pred CCCHHHHhCCH
Confidence 99999999883
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=354.18 Aligned_cols=256 Identities=20% Similarity=0.306 Sum_probs=206.9
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+||.||+|.+.. ...+++.||||++...... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 46678889999999999998762 1115788999999754322 23468999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 148 VAEYMPNDTLAKHLFHWE--------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcc
Confidence 999999999999996421 245799999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCC
Q 010340 220 MKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 220 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
++..... ....+|+.|+|||++.+..++.++|||||||++|+|+| |..|+....... ....+......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~ 259 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-----VLRFVMEGGLL 259 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----HHHHHHTTCCC
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-----HHHHHHcCCcC
Confidence 8754332 22345788999999998889999999999999999999 666554321111 11111111112
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..+..++..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 3345566778999999999999999999999999998764
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=347.54 Aligned_cols=258 Identities=16% Similarity=0.176 Sum_probs=201.4
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+..|.+++.||+|+||.||+|.+.. +++.||||++......+ ...+.+|+.+++.++||||+++++++...+..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 107 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLL---DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETT---TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcC---CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence 4467788999999999999999877 78899999998644333 35688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 146 LLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++...
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999998642 3567999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 224 RDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 224 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
... ....+++.|+|||++.+..++.++||||||+++|+|++|+.||........... ..+.............+
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 264 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYS 264 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH--HHHHTTCSCCCCTTTSC
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH--HHhhcccCCCCcccccC
Confidence 432 234689999999999988999999999999999999999988754321111000 01111111111123456
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 265 ~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 265 EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 678999999999999999999999999998864
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=351.65 Aligned_cols=253 Identities=19% Similarity=0.231 Sum_probs=199.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRD---TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL 79 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCC---CCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence 467788999999999999999987 78899999987654322 3568899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 80 v~e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 80 VFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp EEECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 999999999999886 4567999999999999999999999999 999999999999999999999999999765432
Q ss_pred ---CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-------------------cchh
Q 010340 227 ---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-------------------KNIL 283 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------------------~~~~ 283 (512)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 24568999999999976 568999999999999999999998875432111000 0000
Q ss_pred hhcccccCCCC------CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 284 HLMDSHLEGNF------SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 284 ~~~~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
........... .+..+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 287 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGG
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChH
Confidence 00000000000 0234566889999999999999999999998843
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=346.82 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+.+++.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+++++.++||||+++++++.+ +..++||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HhhhheeeecCCCCeEEEEEEEc----CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 45678889999999999999976 55679999997654 346789999999999999999999999864 5689999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
||+++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 9999999999996433347999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
...+++.|+|||++.+..++.++||||||+++|||++ |+.|+....... ....+........+...+..+.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~ 240 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----VIQNLERGYRMVRPDNCPEELY 240 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCTTCCHHHH
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-----HHHHHhcccCCCCcccccHHHH
Confidence 3345778999999988889999999999999999999 776654322111 1111111222233445567789
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+++.+||+.||++|||+.++++.|+.+.
T Consensus 241 ~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 241 QLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998765
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-44 Score=343.41 Aligned_cols=249 Identities=18% Similarity=0.180 Sum_probs=199.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+.+++.||+|+||.||++.+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++.+....++||
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERS---SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred heeecceeccCCCeEEEEEEEcc---CCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 45678889999999999999987 788899999986543 34578999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee---cCCCCCeeecccCccccC
Q 010340 150 EYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 150 E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 224 (512)
||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++....
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999988642 3467999999999999999999999999 9999999999999 456889999999997654
Q ss_pred CC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 225 DG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 225 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
.. ....+|+.|+|||++. +.++.++|||||||++|+|++|+.||.............. ...... ......++.
T Consensus 179 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~ 254 (285)
T 3is5_A 179 SDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY--KEPNYA-VECRPLTPQ 254 (285)
T ss_dssp --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCC-C--CCCCHH
T ss_pred CcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc--CCcccc-cccCcCCHH
Confidence 32 3456899999999985 5789999999999999999999988764422221111100 000011 001113466
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+.+|+.+||+.||++|||+.+++++-
T Consensus 255 ~~~li~~~L~~dP~~Rps~~e~l~hp 280 (285)
T 3is5_A 255 AVDLLKQMLTKDPERRPSAAQVLHHE 280 (285)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHTSG
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCH
Confidence 88999999999999999999999863
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=383.75 Aligned_cols=247 Identities=18% Similarity=0.219 Sum_probs=208.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcC-CCCCccceEEEEeeCC
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 143 (512)
.+.++.+++.||+|+||.||+|.+.. +++.||||++.+.. ....+.+..|..++..+ +||||+++++++.+.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~---~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~ 415 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD 415 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESS---SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS
T ss_pred cccceEEEEEEccCCCEEEEEEEECC---CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC
Confidence 35678889999999999999999987 78899999997542 23456788999999988 7999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
.++|||||++||+|.+++.. .+.+++..++.|+.||+.||.|||+.+ ||||||||+||||+.++.+||+|||+++..
T Consensus 416 ~~~lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 416 RLYFVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999999974 457999999999999999999999999 999999999999999999999999999853
Q ss_pred CC----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 224 RD----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 224 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...++...+
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s 566 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEH--NVAYPKSMS 566 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHSS--CCCCCTTSC
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH----HHHHHhC--CCCCCccCC
Confidence 22 2356799999999999999999999999999999999999988765322211 1111111 123455667
Q ss_pred HHHHHHHHHhhccCCCCCCCh-----HHHHHH
Q 010340 300 TVVFDLASRCLQYEPRERPNT-----KDLVST 326 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~-----~~vl~~ 326 (512)
..+.+||.+||+.||.+||++ .+|++|
T Consensus 567 ~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 789999999999999999998 777765
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=359.02 Aligned_cols=257 Identities=20% Similarity=0.286 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCC--CCceEEEEEecCccCCC-ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
..+.+++.||+|+||.||+|.+.... ...+.||||++...... ..+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 46678889999999999999987532 13357999999765422 235689999999999 899999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCe
Q 010340 146 LLVAEYMPNDTLAKHLFHWE------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 213 (512)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+|
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~k 204 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAK 204 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEE
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEE
Confidence 99999999999999996431 346899999999999999999999999 99999999999999999999
Q ss_pred eecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhc
Q 010340 214 LSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLM 286 (512)
Q Consensus 214 l~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~ 286 (512)
|+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||+| |..|+...... ......+
T Consensus 205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~~~~~ 280 (333)
T 2i1m_A 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN----SKFYKLV 280 (333)
T ss_dssp BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS----HHHHHHH
T ss_pred ECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh----HHHHHHH
Confidence 9999999754332 23346788999999998899999999999999999999 77665432111 1111222
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 287 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
........+...+..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 281 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 281 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 222223334445677899999999999999999999999998754
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=344.43 Aligned_cols=251 Identities=18% Similarity=0.186 Sum_probs=189.0
Q ss_pred cCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCC
Q 010340 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (512)
Q Consensus 67 ~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 143 (512)
..+..+.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 84 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIH---TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN 84 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS
T ss_pred cccccceeeeeecCCCceEEEEEEEcc---CCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC
Confidence 445677888999999999999999976 78899999997542 123467999999999999999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
..++||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++...
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 99999999999999999964 3467999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHH
Q 010340 224 RDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299 (512)
Q Consensus 224 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (512)
... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.|+....... ....+... ....+...+
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~--~~~~~~~~~ 236 (278)
T 3cok_A 163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN----TLNKVVLA--DYEMPSFLS 236 (278)
T ss_dssp C----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSS--CCCCCTTSC
T ss_pred cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH----HHHHHhhc--ccCCccccC
Confidence 422 24568999999999998889999999999999999999998865321110 01111110 112344456
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..+.+|+.+||+.||++|||+.+++++-.
T Consensus 237 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 265 (278)
T 3cok_A 237 IEAKDLIHQLLRRNPADRLSLSSVLDHPF 265 (278)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred HHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence 77889999999999999999999998743
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-44 Score=353.10 Aligned_cols=252 Identities=19% Similarity=0.232 Sum_probs=198.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC--CCCCccceEEEEeeC----Ce
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL--RHKRLANLIGYCCDG----DE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~ 144 (512)
.+.+++.||+|+||.||+|.+ +++.||||++.... ...+.+|.+++..+ +||||+++++++... ..
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKW-----RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ceEEEeEeecCCCeEEEEEEE-----CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 466888999999999999987 46789999986432 34566667766665 999999999999887 78
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCccccccCccceeecCCCCCeeec
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE--------GRPLYHDLNAYRVLFDENGDPRLSC 216 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~D 216 (512)
.++||||+++|+|.+++.. ..+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|
T Consensus 110 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECC
T ss_pred eEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEe
Confidence 9999999999999999953 4699999999999999999999998 8 99999999999999999999999
Q ss_pred ccCccccCCC--------CccccCcccCCcccccCCCCCCC------CcEEehHHHHHHHHhC----------CCCCChh
Q 010340 217 FGLMKNSRDG--------KSYSTNLAYTPPEYLRNGRVTPE------SVIFSFGTVLLDLLSG----------KHIPPSH 272 (512)
Q Consensus 217 fg~a~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~------~Dv~slG~~l~elltg----------~~~~~~~ 272 (512)
||++...... ....||+.|+|||++.+...+.. +|||||||++|||+|| +.|+...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 9999754332 23478999999999987766665 9999999999999999 4443321
Q ss_pred hHHHHhccchhh-hcccccCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCCC
Q 010340 273 ALDMIRGKNILH-LMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 334 (512)
Q Consensus 273 ~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~ 334 (512)
............ .........++ ..++..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 266 VPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 100000000111 11111222333 267888999999999999999999999999999887544
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=369.12 Aligned_cols=250 Identities=17% Similarity=0.182 Sum_probs=194.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeC-----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 142 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+|+.++||||+++++++...
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred CCeEEEEEeecCCCeEEEEEEECC---CCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 457788999999999999999987 7899999999764322 245788999999999999999999999754
Q ss_pred -CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
..++|||||+++ +|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CCeEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 357999999976 5777774 24899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-------cc----------
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-------KN---------- 281 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------~~---------- 281 (512)
..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp ----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred ecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 76543 35678999999999999999999999999999999999998876432110000 00
Q ss_pred -hh---------------hhcccccCCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 282 -IL---------------HLMDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 282 -~~---------------~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.. ........... ....++.+.+||.+||..||++|||+.++++|-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 358 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence 00 00000000000 0122667899999999999999999999999844
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=347.95 Aligned_cols=247 Identities=18% Similarity=0.266 Sum_probs=207.7
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNR---TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHhhhhcccCCeEEEEEEECC---CCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 5678889999999999999877 788999999976543 235789999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
|+++++|.+++. ...+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 101 YLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp CCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred eCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 999999999994 467999999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.|+........ ...+........+...+..+.+|+
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li 251 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV-----LFLIPKNNPPTLEGNYSKPLKEFV 251 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHHHHHSCCCCCCSSCCHHHHHHH
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH-----HHHhhcCCCCCCccccCHHHHHHH
Confidence 345689999999999988999999999999999999999987654221111 111111122233344556788999
Q ss_pred HHhhccCCCCCCChHHHHHHhccc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+||+.||.+|||+.+++++..-.
T Consensus 252 ~~~l~~dp~~Rps~~~ll~~~~~~ 275 (303)
T 3a7i_A 252 EACLNKEPSFRPTAKELLKHKFIL 275 (303)
T ss_dssp HHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred HHHcCCChhhCcCHHHHhhChhhh
Confidence 999999999999999999986543
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=361.51 Aligned_cols=247 Identities=19% Similarity=0.270 Sum_probs=199.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCC--CCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLR--HKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~ 146 (512)
.|.+++.||+|+||.||++.+. +++.||||++....... .+.+.+|+.+|..++ ||||+++++++...+.++
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcC----CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence 3778889999999999999876 56789999997654322 357899999999996 599999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
|||| +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 133 lv~E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EEEE-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred EEEe-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 9999 568899999974 457899999999999999999999999 99999999999995 589999999999865432
Q ss_pred ------CccccCcccCCcccccC-----------CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc
Q 010340 227 ------KSYSTNLAYTPPEYLRN-----------GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH 289 (512)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+..++...
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~ 284 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPN 284 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTT
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCcc
Confidence 24578999999999865 368899999999999999999998875421110 1122222222
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
....++...+..+.+||.+||+.||.+|||+.+++++.+-
T Consensus 285 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~ 324 (390)
T 2zmd_A 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324 (390)
T ss_dssp SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCc
Confidence 3333344445678899999999999999999999998654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-44 Score=344.46 Aligned_cols=248 Identities=18% Similarity=0.226 Sum_probs=202.2
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccC
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 153 (512)
....||+|+||.||+|.+.. +++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLS---NQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp SBCEEEECSSSEEEEEEETT---TCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CcEEEeecCcEEEEEEEECC---CCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 34467999999999999987 788999999987655556789999999999999999999999999999999999999
Q ss_pred CCCHHhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CCCCeeecccCccccCC----CC
Q 010340 154 NDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRD----GK 227 (512)
Q Consensus 154 ~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~a~~~~~----~~ 227 (512)
+++|.+++.... ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++. ++.+||+|||++..... ..
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 999999997532 335678999999999999999999999 999999999999987 89999999999876543 23
Q ss_pred ccccCcccCCcccccCCC--CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
...||+.|+|||++.+.. ++.++||||||+++|+|++|+.||......... .............+...+..+.+|
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l 258 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFKVGMFKVHPEIPESMSAEAKAF 258 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHHHHHHCCCCCCCTTSCHHHHHH
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHhhccccccccccccCCHHHHHH
Confidence 457899999999997654 889999999999999999999886532111110 001111112334455666778999
Q ss_pred HHHhhccCCCCCCChHHHHHHhc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+||+.||++|||+.+++++-.
T Consensus 259 i~~~l~~dp~~Rps~~~ll~~~~ 281 (295)
T 2clq_A 259 ILKCFEPDPDKRACANDLLVDEF 281 (295)
T ss_dssp HHHTTCSSTTTSCCHHHHHTSGG
T ss_pred HHHHccCChhhCCCHHHHhcChh
Confidence 99999999999999999998743
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-44 Score=341.28 Aligned_cols=249 Identities=19% Similarity=0.171 Sum_probs=204.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEeecCCCcEEEEEEECC---CCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 46688899999999999999987 78899999997554333 467999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~---- 225 (512)
||+++++|.+++. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 85 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EecCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999999996 4567999999999999999999999999 99999999999999999999999999875432
Q ss_pred --CCccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 --GKSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||......... ...+.............+..+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 238 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE---YSDWKEKKTYLNPWKKIDSAP 238 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH---HHHHHTTCTTSTTGGGSCHHH
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH---HHHhhhcccccCchhhcCHHH
Confidence 234568999999999987765 77999999999999999999887542111000 011111111111123456678
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+|+.+||+.||.+|||+.+++++-.
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~~~~ 264 (276)
T 2yex_A 239 LALLHKILVENPSARITIPDIKKDRW 264 (276)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred HHHHHHHCCCCchhCCCHHHHhcCcc
Confidence 89999999999999999999988643
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=353.23 Aligned_cols=257 Identities=19% Similarity=0.266 Sum_probs=206.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCC-e
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGD-E 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-~ 144 (512)
..+.+++.||+|+||.||+|.+.. ...+++.||||++....... .+.+.+|+.++.++ +||||+++++++...+ .
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 106 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 106 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc
Confidence 456788899999999999998643 22377899999998654322 34689999999999 7999999999998754 4
Q ss_pred eEEEEEccCCCCHHhhhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWEN--------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 210 (512)
.++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+|||++.++
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~ 185 (316)
T 2xir_A 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKN 185 (316)
T ss_dssp CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGG
T ss_pred eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCC
Confidence 8999999999999999975322 12899999999999999999999999 99999999999999999
Q ss_pred CCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchh
Q 010340 211 DPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~ 283 (512)
.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..|+....... ...
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~----~~~ 261 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFC 261 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH----HHH
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH----HHH
Confidence 99999999997654322 3456789999999998899999999999999999998 887764321111 111
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
..+........+...++.+.+++.+||+.||.+|||+.+++++|+.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111222334445677899999999999999999999999998765
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=353.88 Aligned_cols=259 Identities=19% Similarity=0.314 Sum_probs=208.8
Q ss_pred cccccccCCCCCCCeEEEEEEcC-CCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCC--eeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 147 (512)
.+.+++.||+|+||.||++.+.. ...+++.||||++........+.+.+|+.+++.++||||+++++++...+ ..++
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 121 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEE
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEE
Confidence 46678899999999999998532 12278899999998755444567999999999999999999999987644 7899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 122 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 122 IMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp EECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred EEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 9999999999999975 3456999999999999999999999999 9999999999999999999999999998654332
Q ss_pred -------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh---c--------cchhhhcccc
Q 010340 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR---G--------KNILHLMDSH 289 (512)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~---~--------~~~~~~~~~~ 289 (512)
...++..|+|||++.+..++.++|||||||++|||+||..|+......... . ..+...+...
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence 234567899999998888999999999999999999998765432111110 0 0111222222
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.....+..++..+.+||.+||+.||.+|||+.++++.|+.+.
T Consensus 280 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 280 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 233345566778999999999999999999999999998764
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=362.02 Aligned_cols=246 Identities=19% Similarity=0.209 Sum_probs=193.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--------ChhHHHHHHHHHhcCCCCCccceEEEEeeC
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 142 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.+|++++||||+++++++. .
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERK---TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred cEEEEeEEeeCCCeEEEEEEECC---CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 46678889999999999999987 7889999998754311 1235889999999999999999999985 4
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC---CCCeeecccC
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGL 219 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfg~ 219 (512)
+..++||||+++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred CceEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeeccc
Confidence 56899999999999999986 4567999999999999999999999999 9999999999999754 4599999999
Q ss_pred ccccCCC---CccccCcccCCcccccC---CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 220 MKNSRDG---KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 220 a~~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
++..... ....||+.|+|||++.+ ..++.++|||||||++|+|+||+.||..... .......+..... .
T Consensus 289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~i~~~~~-~ 363 (419)
T 3i6u_A 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQITSGKY-N 363 (419)
T ss_dssp TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS----SCCHHHHHHTTCC-C
T ss_pred ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc----hHHHHHHHhcCCC-C
Confidence 9876543 35678999999999853 5688899999999999999999988753211 1111111111111 1
Q ss_pred CCH----HHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 294 FSS----EEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 294 ~~~----~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+ ..+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 364 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 111 24567899999999999999999999999744
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=354.19 Aligned_cols=253 Identities=20% Similarity=0.292 Sum_probs=197.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKL---TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECC---CCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 467788999999999999999987 78899999997544322 23566899999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 79 FEYLDK-DLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp EECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred eccccc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 999974 89998865 4557999999999999999999999999 999999999999999999999999998754422
Q ss_pred --CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC----------
Q 010340 227 --KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN---------- 293 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 293 (512)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ..+...........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL-HFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCChHhchhhhcchhh
Confidence 23467999999999976 56899999999999999999999887653221110 00000000000000
Q ss_pred ---------------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 294 ---------------FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 294 ---------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
..+..+..+.+|+.+||+.||.+|||+.+++++-.-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 285 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhh
Confidence 012235668899999999999999999999998543
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=357.88 Aligned_cols=253 Identities=20% Similarity=0.228 Sum_probs=204.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..+.+++.||+|+||.||++.+.. +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKP---SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECC---CCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 356788899999999999999987 78899999998653222 35789999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccC--C
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR--D 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~--~ 225 (512)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+. + |+||||||+|||++.++.+||+|||++.... .
T Consensus 110 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp ECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred EECCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 999999999999974 45699999999999999999999996 7 9999999999999999999999999986532 2
Q ss_pred CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc--------------------------
Q 010340 226 GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-------------------------- 279 (512)
Q Consensus 226 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------------------------- 279 (512)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||..........
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266 (360)
T ss_dssp ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------
T ss_pred ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccc
Confidence 345678999999999999899999999999999999999998876432111100
Q ss_pred --------cchhhh----cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 280 --------KNILHL----MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 280 --------~~~~~~----~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...... .............+..+.+||.+||+.||.+|||+.++++|-.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp -------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred cccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 000000 0000111111234567899999999999999999999999854
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=351.49 Aligned_cols=255 Identities=21% Similarity=0.238 Sum_probs=200.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee----
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD---- 141 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~---- 141 (512)
.++.|.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 91 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP 91 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETT---TCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC---
T ss_pred cccceeEEEEEecCCCcEEEEEEECC---CCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccc
Confidence 34578889999999999999999987 78899999987654322 4578899999999999999999999987
Q ss_pred ----CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 142 ----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 142 ----~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
.+..++||||+++ +|.+.+.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 92 YNRCKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -----CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccc
Confidence 4468999999975 78777754 4457999999999999999999999999 999999999999999999999999
Q ss_pred cCccccCC--------CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc
Q 010340 218 GLMKNSRD--------GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 218 g~a~~~~~--------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
|+++.... .....||+.|+|||++.+ ..++.++|||||||++|+|+||+.||......... ..+......
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~i~~~~~~ 247 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL-ALISQLCGS 247 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCC
Confidence 99875432 123467999999999976 45899999999999999999999877643211110 000000000
Q ss_pred ccC-------------------C-CCC--H-----HHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 289 HLE-------------------G-NFS--S-----EEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 289 ~~~-------------------~-~~~--~-----~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
... . ... . ..++.+.+||.+||+.||++|||+.+++++-.-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 315 (351)
T 3mi9_A 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315 (351)
T ss_dssp CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCc
Confidence 000 0 000 0 014568899999999999999999999998554
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=354.26 Aligned_cols=253 Identities=20% Similarity=0.305 Sum_probs=200.9
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 100 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKD---TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWY 100 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETT---TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECC---CCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEE
Confidence 4568889999999999999999987 78899999987654322 345789999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 101 lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 101 LVFEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp EEEECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred EEEecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999999999988875 4567999999999999999999999999 999999999999999999999999999764432
Q ss_pred ----CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc-------------------ch
Q 010340 227 ----KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK-------------------NI 282 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-------------------~~ 282 (512)
....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||........... ..
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 345689999999999775 689999999999999999999988764321110000 00
Q ss_pred -hhhcccccCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 283 -LHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 283 -~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.....+......+ +..++.+.+|+.+||+.||.+|||+.+++++-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 308 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0000000011111 23456789999999999999999999998874
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-44 Score=368.35 Aligned_cols=248 Identities=19% Similarity=0.164 Sum_probs=204.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC--CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++.... ......+.+|+.+|++++||||+++++++.+....++|
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRI---TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETT---TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ceEEeEEEeecCCEEEEEEEECC---CCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 56788899999999999999987 78899999986432 23457899999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec---CCCCCeeecccCccccCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~ 225 (512)
|||+++|+|.+.+.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++....
T Consensus 100 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 100 GELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999998863 457999999999999999999999999 99999999999995 556799999999976544
Q ss_pred C---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC--CCCHHHHH
Q 010340 226 G---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG--NFSSEEAT 300 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 300 (512)
. ....||+.|+|||++.+ .++.++|||||||++|+|++|..||......... ..+....... ......++
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~ 251 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISD 251 (486)
T ss_dssp C----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCSCSGGGGGSCH
T ss_pred CCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCCcccCCCCH
Confidence 3 34578999999999975 5999999999999999999999887643221111 1111111111 11234567
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+.+||.+||+.||.+|||+.+++++-+-
T Consensus 252 ~~~~li~~~L~~dp~~R~t~~~~l~hp~~ 280 (486)
T 3mwu_A 252 DAKDLIRKMLTFHPSLRITATQCLEHPWI 280 (486)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHCHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcCHhh
Confidence 78999999999999999999999998543
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=352.20 Aligned_cols=257 Identities=21% Similarity=0.305 Sum_probs=203.4
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+.+++.||+|+||.||+|.+.. ...+++.||||++...... ....+.+|+.++++++||||+++++++.+....++
T Consensus 31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (327)
T 2yfx_A 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 110 (327)
T ss_dssp GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEE
Confidence 56688899999999999999542 1126788999999754321 23578999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccC
Q 010340 148 VAEYMPNDTLAKHLFHWEN-----QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGL 219 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~ 219 (512)
||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+|||++. +..+||+|||+
T Consensus 111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~ 189 (327)
T 2yfx_A 111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGM 189 (327)
T ss_dssp EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcccc
Confidence 9999999999999975322 45899999999999999999999999 999999999999984 45699999999
Q ss_pred ccccCC------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCC
Q 010340 220 MKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 220 a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
+..... .....+|+.|+|||++.+..++.++|||||||++|+|+| |..|+....... ....+......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~ 264 (327)
T 2yfx_A 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-----VLEFVTSGGRM 264 (327)
T ss_dssp HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----HHHHHHTTCCC
T ss_pred ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH-----HHHHHhcCCCC
Confidence 864322 234567889999999988899999999999999999998 776654332111 11111111222
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
..+..++..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 265 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 265 DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 33455667789999999999999999999999999987643
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=362.54 Aligned_cols=259 Identities=15% Similarity=0.161 Sum_probs=208.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCC--eeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 147 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.... ..++
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKK---TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred ceEEEEEEEcCCCeEEEEEEECC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 56778889999999999999987 788999999986442 33567889999999999999999999998755 7899
Q ss_pred EEEccCCCCHHhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee----cCCCCCeeecccCccc
Q 010340 148 VAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMKN 222 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfg~a~~ 222 (512)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 999999999999997432 233999999999999999999999999 9999999999999 7778899999999986
Q ss_pred cCCC---CccccCcccCCcccccC--------CCCCCCCcEEehHHHHHHHHhCCCCCChhhH-----HH---Hhccchh
Q 010340 223 SRDG---KSYSTNLAYTPPEYLRN--------GRVTPESVIFSFGTVLLDLLSGKHIPPSHAL-----DM---IRGKNIL 283 (512)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~-----~~---~~~~~~~ 283 (512)
.... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... .. .......
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245 (396)
T ss_dssp CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence 5443 24568999999999865 5678899999999999999999988642110 00 0000000
Q ss_pred hh-------------c--ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 284 HL-------------M--DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 284 ~~-------------~--~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.. + .......++...+..+.+++.+||+.||++|||+.++++.+..+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 00 0 00111234577888899999999999999999999999999877643
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-44 Score=355.43 Aligned_cols=251 Identities=17% Similarity=0.214 Sum_probs=196.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCC----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 143 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+|+.++||||+++++++....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp SSEEEEEEC------CEEEEEETT---TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred ceEEEeEEeeecCCeEEEEEEECC---CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 357788899999999999999987 78899999997543222 356889999999999999999999998653
Q ss_pred --eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 144 --ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 144 --~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.+++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 8899999964 56999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCC-CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------ccchh---------
Q 010340 222 NSRD-GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------GKNIL--------- 283 (512)
Q Consensus 222 ~~~~-~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~~~~--------- 283 (512)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......... +....
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~ 256 (367)
T 1cm8_A 177 QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD 256 (367)
T ss_dssp ECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred ccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhH
Confidence 7544 345678999999999977 67999999999999999999999887643211000 00000
Q ss_pred ------hhcccccC---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 284 ------HLMDSHLE---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 284 ------~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..+..... ....+..++.+.+|+.+||..||.+|||+.++++|-.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~ 310 (367)
T 1cm8_A 257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310 (367)
T ss_dssp HHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred HHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChH
Confidence 00000000 0112344567899999999999999999999999743
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-44 Score=350.34 Aligned_cols=251 Identities=17% Similarity=0.158 Sum_probs=204.0
Q ss_pred cccc-ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 72 DFIV-SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 72 ~~~i-~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
|.++ +.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.++..+ .||||+++++++.+.+..++
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKS---TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 3344 679999999999999987 7889999999865432 246799999999999 57999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCccccC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKNSR 224 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a~~~~ 224 (512)
||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 185 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG 185 (327)
T ss_dssp EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence 999999999999997545678999999999999999999999999 999999999999987 7899999999998754
Q ss_pred CC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 225 DG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 225 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+.. .............+..
T Consensus 186 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-~i~~-~~~~~~~~~~~~~~~~ 263 (327)
T 3lm5_A 186 HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL-NISQ-VNVDYSEETFSSVSQL 263 (327)
T ss_dssp --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHH-TCCCCCTTTTTTSCHH
T ss_pred CccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH-HHHh-cccccCchhhcccCHH
Confidence 43 34578999999999999999999999999999999999998875432211110 1111 1111222223455677
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+||.+||+.||.+|||+.+++++-.
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 264 ATDFIQSLLVKNPEKRPTAEICLSHSW 290 (327)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred HHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence 889999999999999999999998754
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=381.67 Aligned_cols=244 Identities=20% Similarity=0.270 Sum_probs=201.9
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
.||+|+||.||+|.+.... +++.||||+++...... .+.+.+|+.+|++++|||||+++++|.. +..+|||||+++
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEECSSEEEEEEEEECSS-CEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred EeccCCCEEEEEEEEcCCC-cceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 6899999999999765432 67889999998654322 4679999999999999999999999965 558899999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-------
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------- 227 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------- 227 (512)
|+|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 454 g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999997 4567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...+........+..++..+.+||
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~~i~~~~~~~~p~~~~~~l~~li 605 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEKGERMGCPAGCPREMYDLM 605 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999998899999999999999999998 88776543221 12222223333445566778899999
Q ss_pred HHhhccCCCCCCChHHHHHHhccc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.+||+.||++|||+.+|++.|+.+
T Consensus 606 ~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHH
Confidence 999999999999999999999765
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=368.31 Aligned_cols=247 Identities=17% Similarity=0.165 Sum_probs=199.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|.+++.||+|+||.||+|.+.. ++..||||++..... .....+.+|+.+++.++|||||+++++|.+....++|
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKV---THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETT---TCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CeEEeeEEecCCCEEEEEEEECC---CCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46788899999999999999987 788899999986542 2356799999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCccccCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a~~~~~ 225 (512)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++.....
T Consensus 115 ~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 115 MECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred EecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999998863 467999999999999999999999999 999999999999975 45599999999976544
Q ss_pred C---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC--CCCCHHHHH
Q 010340 226 G---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE--GNFSSEEAT 300 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 300 (512)
. ....||+.|+|||++. +.++.++|||||||++|+|++|..||......... ..+...... .......++
T Consensus 192 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~ 266 (494)
T 3lij_A 192 QKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL----RKVEKGKYTFDSPEWKNVSE 266 (494)
T ss_dssp TBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCSGGGTTSCH
T ss_pred CccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCchhcccCCH
Confidence 3 3457899999999986 56999999999999999999999887643222111 111111111 111123456
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+.+||.+||+.||.+|||+.++++|-+
T Consensus 267 ~~~~li~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 267 GAKDLIKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred HHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence 7889999999999999999999998743
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=349.67 Aligned_cols=247 Identities=18% Similarity=0.188 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEEee--CCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCD--GDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~ 146 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++... ..+.+.+|+.+++.++ ||||+++++++.+ ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINIT---NNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECC---CCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 457788999999999999999987 7889999999743 3578999999999996 9999999999987 66789
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeeecccCccccCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRD 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~~ 225 (512)
+||||+++++|.+++. .+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++....
T Consensus 110 lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999999884 3899999999999999999999999 99999999999999776 899999999986543
Q ss_pred C---CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh---------ccchhhh-------
Q 010340 226 G---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR---------GKNILHL------- 285 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~---------~~~~~~~------- 285 (512)
. ....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||......... .......
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 2 34568899999999977 56899999999999999999999887432110000 0000000
Q ss_pred ----------------cccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 286 ----------------MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 286 ----------------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+........+...++.+.+||.+||+.||.+|||+.++++|-.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~ 322 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence 0001111122235677999999999999999999999999743
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=369.57 Aligned_cols=248 Identities=18% Similarity=0.156 Sum_probs=206.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEecCCCEEEEEEEECC---CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46678889999999999999987 788999999975532 345679999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee---cCCCCCeeecccCccccC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 224 (512)
||||+.+|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 104 v~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 104 VGEVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp EECCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 999999999999997 4567999999999999999999999999 9999999999999 567899999999998665
Q ss_pred CCC---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC--CCHHHH
Q 010340 225 DGK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN--FSSEEA 299 (512)
Q Consensus 225 ~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 299 (512)
... ...||+.|+|||++.+ .++.++|||||||++|+|++|..||........ ...+........ .....+
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s 255 (484)
T 3nyv_A 181 ASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI----LKKVEKGKYTFELPQWKKVS 255 (484)
T ss_dssp CCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCSGGGGGSC
T ss_pred cccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCCcccccCC
Confidence 433 3468999999999965 799999999999999999999988764322111 111111111111 123456
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+.+.+||.+||+.||.+|||+.++++|-+-
T Consensus 256 ~~~~~li~~~L~~dp~~R~s~~e~l~h~~~ 285 (484)
T 3nyv_A 256 ESAKDLIRKMLTYVPSMRISARDALDHEWI 285 (484)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhhChhh
Confidence 778999999999999999999999998553
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=345.85 Aligned_cols=255 Identities=17% Similarity=0.213 Sum_probs=206.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee--CCe
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD--GDE 144 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 144 (512)
...|.+++.||+|+||.||++.+.. +++.||+|++....... .+.+.+|+.++++++||||+++++++.+ ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECC---CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCce
Confidence 3467788999999999999999987 78899999997654322 3568999999999999999999998854 578
Q ss_pred eEEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC----ccccccCccceeecCCCCCeeeccc
Q 010340 145 RLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGR----PLYHDLNAYRVLFDENGDPRLSCFG 218 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfg 218 (512)
.++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+. ++|+||||+|||++.++.+||+|||
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999999999642 23459999999999999999999998762 9999999999999999999999999
Q ss_pred CccccCCCC----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCC
Q 010340 219 LMKNSRDGK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF 294 (512)
Q Consensus 219 ~a~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (512)
++....... ...+|+.|+|||++.+..++.++||||||+++|+|++|+.|+........ ...+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~i~~~~~~~~ 236 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-----AGKIREGKFRRI 236 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHHHHHTCCCCC
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH-----HHHHhhcccccC
Confidence 987655432 34689999999999988899999999999999999999987654321111 111111112234
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 295 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 295 ~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+...+..+.+++.+||+.||.+|||+.+++++++...
T Consensus 237 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 237 PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 4456677899999999999999999999999876543
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=346.44 Aligned_cols=256 Identities=20% Similarity=0.261 Sum_probs=198.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..+.+++.||+|+||.||+|.+......+..||||+++...... .+.+.+|+.+++.++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 35778899999999999999976543345579999998654322 357899999999999999999999998765 89
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||++......
T Consensus 97 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeEecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 99999999999999975 3456999999999999999999999999 999999999999999999999999998765432
Q ss_pred C-------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 227 K-------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 227 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
. ...+|+.|+|||++.+..++.++||||||+++|+|++ |+.|+........ ...+.........+...
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~ 250 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEGERLPRPEDC 250 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----HHHHHTSCCCCCCCTTC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH----HHHHHccCCCCCCCcCc
Confidence 2 2346778999999988889999999999999999999 8877654321111 11111111222334456
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 6779999999999999999999999999998764
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-44 Score=342.91 Aligned_cols=245 Identities=17% Similarity=0.205 Sum_probs=202.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------ChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
.|.+++.||+|+||.||++.+.. +++.||||++...... ..+.+.+|+.++++++||||+++++++.+...
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKG---TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhHHhhcccCceEEEEEEEcC---CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 36678889999999999999987 7889999998765432 24679999999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC----CCeeecccCc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLM 220 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg~a 220 (512)
.++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999999963 457999999999999999999999999 99999999999998777 8999999999
Q ss_pred cccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC--
Q 010340 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295 (512)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (512)
...... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.|+......... ..+.. .....+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~--~~~~~~~~ 233 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL----TNISA--VNYDFDEE 233 (283)
T ss_dssp EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHT--TCCCCCHH
T ss_pred eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHH----HHhHh--cccCCcch
Confidence 765433 2446899999999999889999999999999999999999887543221110 00000 011112
Q ss_pred --HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 296 --SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 296 --~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
...+..+.+|+.+||..||.+|||+.+++++-
T Consensus 234 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 267 (283)
T 3bhy_A 234 YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267 (283)
T ss_dssp HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCH
T ss_pred hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCH
Confidence 22356688999999999999999999999863
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=345.52 Aligned_cols=248 Identities=19% Similarity=0.238 Sum_probs=200.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.+++.||+|+||.||+|.+.. +++.||+|++........+.+.+|+.++..++||||+++++++...+..++|||
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKE---TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETT---TCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ceeecceeccCCCeEEEEEEEcC---CCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 46788899999999999999987 788999999987766667889999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc----CCC
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS----RDG 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~----~~~ 226 (512)
|+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++... ...
T Consensus 97 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (302)
T 2j7t_A 97 FCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174 (302)
T ss_dssp CCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred eCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence 9999999998864 3567999999999999999999999999 999999999999999999999999987532 223
Q ss_pred CccccCcccCCcccc-----cCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc-CCCCCHHHHH
Q 010340 227 KSYSTNLAYTPPEYL-----RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL-EGNFSSEEAT 300 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~-----~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 300 (512)
....||+.|+|||++ .+..++.++|||||||++|+|++|+.|+........ ...+..... ....+...+.
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 250 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV----LLKIAKSDPPTLLTPSKWSV 250 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSSGGGSCH
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH----HHHHhccCCcccCCccccCH
Confidence 345789999999998 356789999999999999999999987654321111 011111111 1122344567
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.+.+++.+||+.||.+|||+.+++++-
T Consensus 251 ~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 251 EFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred HHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 789999999999999999999998863
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=351.33 Aligned_cols=253 Identities=19% Similarity=0.190 Sum_probs=197.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-----hhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----PKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|+.+++.++||||+++++++.+.+.
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKN---TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSS---CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred cccEEEeEEeecCCEEEEEEEECC---CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 456688889999999999999987 78899999997543221 2468899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred eEEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 9999999986 89888864 4456899999999999999999999999 9999999999999999999999999998654
Q ss_pred CC----CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc-----------
Q 010340 225 DG----KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS----------- 288 (512)
Q Consensus 225 ~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~----------- 288 (512)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|.+|+.......... .+......
T Consensus 164 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 164 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT-RIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHHCCCCTTTSSSTTS
T ss_pred CCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH-HHHHHcCCCChhhhhhhcc
Confidence 32 345689999999999764 48899999999999999999997765432111100 00000000
Q ss_pred -------ccCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 289 -------HLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 289 -------~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
......+ ...+..+.+||.+||+.||.+|||+.+++++-.-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f 295 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence 0000111 2345678999999999999999999999998654
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=341.13 Aligned_cols=248 Identities=18% Similarity=0.179 Sum_probs=207.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
..|.+++.||+|+||.||++.+.. +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECC---CCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence 356778889999999999999987 78899999997654333 356889999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC-
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 225 (512)
+||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 92 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 92 VVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEEECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999999863 457999999999999999999999999 99999999999999999999999999876532
Q ss_pred ---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 ---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
.....+|+.|+|||++.+..++.++||||||+++|+|++|+.|+........ ...+... ....+...+..+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~ 242 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKN--EYSIPKHINPVA 242 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTT--CCCCCTTSCHHH
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhhc--cCCCccccCHHH
Confidence 2235689999999999988899999999999999999999988654322111 0111111 112344455678
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+++.+||+.||++|||+.+++++-.-
T Consensus 243 ~~li~~~l~~~p~~Rps~~~ll~~~~~ 269 (294)
T 2rku_A 243 ASLIQKMLQTDPTARPTINELLNDEFF 269 (294)
T ss_dssp HHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred HHHHHHHcccChhhCcCHHHHhhChhe
Confidence 899999999999999999999987543
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=342.80 Aligned_cols=249 Identities=16% Similarity=0.181 Sum_probs=202.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..+.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+.+|+.++..++||||+++++++...+..++||
T Consensus 29 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 29 EVFDVLEKLGEGSYGSVYKAIHKE---TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp -CEEEEEECC----CEEEEEEETT---TCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhhhheeeccCCCeEEEEEEECC---CCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 356688899999999999999987 78899999997643 4578999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++......
T Consensus 104 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (314)
T 3com_A 104 EYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 181 (314)
T ss_dssp ECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred ecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence 99999999999863 3567999999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.||......... ..... ........+...+..+.+|
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~l 258 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-FMIPT--NPPPTFRKPELWSDNFTDF 258 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHH--SCCCCCSSGGGSCHHHHHH
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhc--CCCcccCCcccCCHHHHHH
Confidence 3456899999999999888999999999999999999999876542111100 00000 0001111233456778999
Q ss_pred HHHhhccCCCCCCChHHHHHHhc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+||..||.+|||+.+++++-.
T Consensus 259 i~~~l~~dp~~Rpt~~~ll~~~~ 281 (314)
T 3com_A 259 VKQCLVKSPEQRATATQLLQHPF 281 (314)
T ss_dssp HHHHTCSCTTTSCCHHHHTTSHH
T ss_pred HHHHccCChhhCcCHHHHHhCHH
Confidence 99999999999999999988744
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=364.43 Aligned_cols=253 Identities=15% Similarity=0.139 Sum_probs=202.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCC-CCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH-KRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv 148 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++..... ..++.+|++++..++| ++|..+..++......+||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETT---TCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECC---CCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 356788899999999999999887 788999999875442 3468999999999976 6666777777888899999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee---cCCCCCeeecccCccccCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~~~ 225 (512)
|||+ +++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+++....
T Consensus 82 me~~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp EECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EECC-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 9999 8999999964 3567999999999999999999999999 9999999999999 6889999999999986543
Q ss_pred CC-----------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC--
Q 010340 226 GK-----------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG-- 292 (512)
Q Consensus 226 ~~-----------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 292 (512)
.. ...||+.|+|||++.+..++.++||||||||||||++|+.||........ ...+..+.......
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVATSI 237 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHHHHHHHHSCH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHHhhccccccH
Confidence 22 45789999999999999999999999999999999999988754211000 00000110000000
Q ss_pred -CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 293 -NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 293 -~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+...++..+.+|+..||+.||++||++.+|++.|+.+.
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 001123467889999999999999999999999988764
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=341.30 Aligned_cols=248 Identities=17% Similarity=0.206 Sum_probs=199.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee----CCee
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD----GDER 145 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 145 (512)
+.+.+.||+|+||.||+|.+.. ++..||+|++....... .+.+.+|+.+++.++||||+++++++.. ...+
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~---~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecC---CceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 4566679999999999999987 78889999987654322 3568999999999999999999999875 4568
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeec-CCCCCeeecccCcccc
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNS 223 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~ 223 (512)
++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ +++|+||||+|||++ .++.+||+|||++...
T Consensus 105 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999999973 467999999999999999999999985 599999999999997 7899999999999765
Q ss_pred CCC--CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 224 RDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 224 ~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
... ....||+.|+|||++. +.++.++|||||||++|+|++|+.||........... .+........++...++.
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 258 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPE 258 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHH
T ss_pred cccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHH---HHhccCCccccCCCCCHH
Confidence 443 2456899999999886 4699999999999999999999988754211111000 111111111122233456
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+|+.+||+.||.+|||+.+++++-.
T Consensus 259 l~~li~~~l~~dp~~Rps~~ell~h~~ 285 (290)
T 1t4h_A 259 VKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHHHccCChhhCCCHHHHhhCcc
Confidence 889999999999999999999998743
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=352.02 Aligned_cols=250 Identities=19% Similarity=0.206 Sum_probs=188.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEEe--------e
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCC--------D 141 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~ 141 (512)
.+.+++.||+|+||.||+|.+.. +++.||||++........+.+.+|+.++.++. ||||+++++++. .
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVG---SGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred eEEEEEEEccCCceEEEEEEECC---CCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 46688899999999999999987 78899999986654334567899999999995 999999999994 3
Q ss_pred CCeeEEEEEccCCCCHHhhhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeecCCCCCeeecccC
Q 010340 142 GDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
...+++||||+. |+|.+++.. .....+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 345899999996 699998864 24567999999999999999999999975 499999999999999999999999999
Q ss_pred ccccCCCC----------------ccccCcccCCcccc---cCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc
Q 010340 220 MKNSRDGK----------------SYSTNLAYTPPEYL---RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK 280 (512)
Q Consensus 220 a~~~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~ 280 (512)
++...... ...+|+.|+|||++ .+..++.++|||||||++|+|+||+.||.....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------ 258 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK------ 258 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH------
Confidence 97654321 33588999999998 566789999999999999999999988653221
Q ss_pred chhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 281 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..+.............+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 259 --~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 259 --LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ---------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111112212222333457899999999999999999999999988764
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=367.90 Aligned_cols=247 Identities=16% Similarity=0.190 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-------------CChhHHHHHHHHHhcCCCCCccceE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-------------PDPKQFADEAWGVGKLRHKRLANLI 136 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~ 136 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.+|+.++||||++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKN---GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETT---TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred cceEEEeEecccCCeEEEEEEECC---CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 356788899999999999999987 788999999976432 2245789999999999999999999
Q ss_pred EEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC---CCe
Q 010340 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPR 213 (512)
Q Consensus 137 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~k 213 (512)
+++.+....+||||||+||+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+|
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999999873 467999999999999999999999999 99999999999998776 699
Q ss_pred eecccCccccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc
Q 010340 214 LSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL 290 (512)
Q Consensus 214 l~Dfg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (512)
|+|||++...... ....||+.|+|||++. +.++.++|||||||++|+|++|..||......... ..+.....
T Consensus 190 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~ 264 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII----KKVEKGKY 264 (504)
T ss_dssp ECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCC
T ss_pred EEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCC
Confidence 9999999865543 3457899999999986 56999999999999999999999887643221111 11111101
Q ss_pred CCCCC----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 291 EGNFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 291 ~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.++ ...++.+.+||.+||..||.+|||+.+++++-+-
T Consensus 265 --~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 305 (504)
T 3q5i_A 265 --YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305 (504)
T ss_dssp --CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred --CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhh
Confidence 111 2345678999999999999999999999988553
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=359.91 Aligned_cols=249 Identities=13% Similarity=0.033 Sum_probs=184.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHH---HHhcCCCCCccceE-------EE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAW---GVGKLRHKRLANLI-------GY 138 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~---~l~~l~h~niv~l~-------~~ 138 (512)
+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+. +|+. +||||++++ ++
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVE---RLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred eeeeeeccCCCCEEEEEEEECC---CCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 6678889999999999999987 78999999998765422 345777854 5555 799988755 55
Q ss_pred EeeC-----------------CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCcc
Q 010340 139 CCDG-----------------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMR------LRVALYIAEALDYCSSEGRPL 195 (512)
Q Consensus 139 ~~~~-----------------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~ii 195 (512)
+... ...+|||||++ |+|.+++... ...+++..+ +.++.||+.||.|||+++ |+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-iv 216 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LV 216 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EE
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-Cc
Confidence 5443 23799999998 7999999753 234455555 778899999999999999 99
Q ss_pred ccccCccceeecCCCCCeeecccCccccCCCC-ccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCCCChh
Q 010340 196 YHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-SYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSH 272 (512)
Q Consensus 196 H~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~~~~~ 272 (512)
||||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999998776544 5567899999999987 67999999999999999999999887543
Q ss_pred hHHHHhccc---hhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 273 ALDMIRGKN---ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 273 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
......... .................++.+.+||.+||+.||++|||+.+++++-
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 354 (371)
T 3q60_A 297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETP 354 (371)
T ss_dssp CTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSH
T ss_pred CcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCH
Confidence 211110000 0111111111112235567799999999999999999999998763
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=340.47 Aligned_cols=249 Identities=17% Similarity=0.170 Sum_probs=201.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC----CCChhHHHHHHHHHhcCCCCCccceEEEEe--eCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA----WPDPKQFADEAWGVGKLRHKRLANLIGYCC--DGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~ 143 (512)
..|.+++.||+|+||.||++.+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++. +..
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSE---TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTT---TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred cceeEeeEEecCCCeEEEEEEECC---CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence 467788899999999999999887 78899999997542 223467999999999999999999999984 456
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
..++||||++++ |.+++.......+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++...
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 789999999876 888887656678999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC------CccccCcccCCcccccCCC--CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 224 RDG------KSYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 224 ~~~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
... ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.|+......... ..+... ...++
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~i~~~--~~~~~ 233 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF----ENIGKG--SYAIP 233 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHC--CCCCC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH----HHHhcC--CCCCC
Confidence 421 2346899999999997644 477999999999999999999887643221111 011110 11234
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
..++..+.+|+.+||+.||.+|||+.+++++-.-
T Consensus 234 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 267 (305)
T 2wtk_C 234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267 (305)
T ss_dssp SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHH
T ss_pred CccCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence 4556678899999999999999999999998554
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-44 Score=362.52 Aligned_cols=252 Identities=16% Similarity=0.185 Sum_probs=196.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeC-----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 142 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+|+.++||||+++++++...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKN---TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred CCEEEEEEEeecCCEEEEEEEECC---CCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 357788899999999999999987 8899999999764322 235789999999999999999999999776
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
...++||||+. ++|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CeEEEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 56899999996 59999997 5567999999999999999999999999 99999999999999999999999999986
Q ss_pred cCCC--------------------------CccccCcccCCcccc-cCCCCCCCCcEEehHHHHHHHHhCCCCCC-----
Q 010340 223 SRDG--------------------------KSYSTNLAYTPPEYL-RNGRVTPESVIFSFGTVLLDLLSGKHIPP----- 270 (512)
Q Consensus 223 ~~~~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~~l~elltg~~~~~----- 270 (512)
.... ...+||+.|+|||++ .+..++.++|||||||++|||++|..|+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 5321 345789999999986 45569999999999999999998543322
Q ss_pred ------hhh------------------HHHH------------------hccchhhhcccc-cCCCCC-----HHHHHHH
Q 010340 271 ------SHA------------------LDMI------------------RGKNILHLMDSH-LEGNFS-----SEEATVV 302 (512)
Q Consensus 271 ------~~~------------------~~~~------------------~~~~~~~~~~~~-~~~~~~-----~~~~~~~ 302 (512)
... .+.. ........+... .....+ +..++.+
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 338 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence 110 0000 000000000000 000000 2345678
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+||.+||..||.+|||+.++++|-.
T Consensus 339 ~dLl~~mL~~dP~~R~ta~e~L~Hp~ 364 (432)
T 3n9x_A 339 INLLESMLKFNPNKRITIDQALDHPY 364 (432)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTCGG
T ss_pred HHHHHHHhcCCcccCCCHHHHhcChh
Confidence 89999999999999999999999843
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=345.02 Aligned_cols=255 Identities=17% Similarity=0.244 Sum_probs=185.9
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
...+.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAP---KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC-------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECC---CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 4567788999999999999999876 778899999975432 234678899999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhc------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 148 VAEYMPNDTLAKHLFHW------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999998631 3456999999999999999999999999 9999999999999999999999999986
Q ss_pred ccCCC---------CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh----ccchhhhcc
Q 010340 222 NSRDG---------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR----GKNILHLMD 287 (512)
Q Consensus 222 ~~~~~---------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~----~~~~~~~~~ 287 (512)
..... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... .........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence 54321 23468999999999865 56899999999999999999999886543111100 000000000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 288 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
...........+..+.+|+.+||+.||.+|||+.+++++-
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 289 (303)
T 2vwi_A 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 289 (303)
T ss_dssp -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 0001112233456788999999999999999999999874
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=352.50 Aligned_cols=253 Identities=23% Similarity=0.278 Sum_probs=195.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHH--HhcCCCCCccceEEEEee----
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWG--VGKLRHKRLANLIGYCCD---- 141 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~---- 141 (512)
++..+.+++.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++||||+++++.+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-----DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD 82 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred ChHHhheeeecccCCCeEEEEEEE-----CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence 456788899999999999999976 56889999997543 3445555555 445899999999986643
Q ss_pred -CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CCccccccCccceeecCCCC
Q 010340 142 -GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE---------GRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 142 -~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~---------~~iiH~Dlkp~Nill~~~~~ 211 (512)
...++|||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSC
T ss_pred CCceEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCc
Confidence 2357899999999999999953 4458999999999999999999999 8 999999999999999999
Q ss_pred CeeecccCccccCCC------------CccccCcccCCcccccC-------CCCCCCCcEEehHHHHHHHHhCCCCCChh
Q 010340 212 PRLSCFGLMKNSRDG------------KSYSTNLAYTPPEYLRN-------GRVTPESVIFSFGTVLLDLLSGKHIPPSH 272 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~elltg~~~~~~~ 272 (512)
+||+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|++..
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 999999999764321 13468999999999976 45678999999999999999998765432
Q ss_pred hHHH---------Hhccc----hhh-hcccccCCCC------CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 273 ALDM---------IRGKN----ILH-LMDSHLEGNF------SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 273 ~~~~---------~~~~~----~~~-~~~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.... ..... ... .........+ ....++.+.+||.+||+.||++|||+.++++.|+.+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 1100 00000 000 0011111121 23467789999999999999999999999999998764
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=355.58 Aligned_cols=257 Identities=14% Similarity=0.118 Sum_probs=202.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCC-----CceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccc----------
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGND-----NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLAN---------- 134 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 134 (512)
..|.+++.||+|+||.||+|.+..+.. .++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 367788899999999999999976311 2678999998754 46899999999999999988
Q ss_pred -----eEEEEee-CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC
Q 010340 135 -----LIGYCCD-GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (512)
Q Consensus 135 -----l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~ 208 (512)
+++++.. ....+|||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcC
Confidence 6778876 77899999999 999999998544578999999999999999999999999 999999999999999
Q ss_pred CC--CCeeecccCccccCCC-----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHH
Q 010340 209 NG--DPRLSCFGLMKNSRDG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD 275 (512)
Q Consensus 209 ~~--~~kl~Dfg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~ 275 (512)
++ .+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 88 8999999999754321 2347899999999999889999999999999999999999887643211
Q ss_pred HHhccc-hhhhccc--ccCCC--CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 276 MIRGKN-ILHLMDS--HLEGN--FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 276 ~~~~~~-~~~~~~~--~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
...... ...+... .+... .....+..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 000000 0000000 00000 0112356788999999999999999999999999887643
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=347.24 Aligned_cols=250 Identities=17% Similarity=0.202 Sum_probs=199.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEee------C
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD------G 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~ 142 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++.... ...+.+.+|+.++.++ +||||+++++++.. .
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 24 GIFELVELVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred CcEEEEEEeccCCCEEEEEEEECC---CCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 456688899999999999999987 78899999997543 3457899999999999 89999999999987 4
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
...++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++..
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 67899999999999999997655567999999999999999999999999 99999999999999999999999999876
Q ss_pred cCC----CCccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 223 SRD----GKSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 223 ~~~----~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
... .....||+.|+|||++. +..++.++|||||||++|+|++|..|+........ ...+........
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~ 254 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA----LFLIPRNPAPRL 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCC
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH----HHHhhcCccccC
Confidence 543 23456899999999986 45689999999999999999999987654221110 011111111111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 294 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 294 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+...+..+.+||.+||..||.+|||+.+++++-.
T Consensus 255 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 255 KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHH
T ss_pred CccccCHHHHHHHHHHhccChhhCCCHHHHhhChH
Confidence 22334567889999999999999999999998743
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-45 Score=364.25 Aligned_cols=241 Identities=15% Similarity=0.129 Sum_probs=189.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC---ChhHHHHHH---HHHhcCCCCCccceE-------
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEA---WGVGKLRHKRLANLI------- 136 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~---~~l~~l~h~niv~l~------- 136 (512)
..+.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+ .+++.++|||||+++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQE---TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-C---CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred ceEEEcceeecCCCEEEEEEEECC---CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 346667889999999999999876 7889999999854322 246789999 555666899999998
Q ss_pred EEEeeCC-----------------eeEEEEEccCCCCHHhhhhhcC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCc
Q 010340 137 GYCCDGD-----------------ERLLVAEYMPNDTLAKHLFHWE-----NQTIEWAMRLRVALYIAEALDYCSSEGRP 194 (512)
Q Consensus 137 ~~~~~~~-----------------~~~lv~E~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~i 194 (512)
+++.+.+ ..+|||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||+++ |
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i 227 (377)
T 3byv_A 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-L 227 (377)
T ss_dssp EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-E
T ss_pred hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-e
Confidence 7766553 278999999 679999997421 123446888999999999999999999 9
Q ss_pred cccccCccceeecCCCCCeeecccCccccCCC-CccccCcccCCcccccCC-----------CCCCCCcEEehHHHHHHH
Q 010340 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNG-----------RVTPESVIFSFGTVLLDL 262 (512)
Q Consensus 195 iH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el 262 (512)
+||||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 99999999999999999999999999865442 24456 999999999887 799999999999999999
Q ss_pred HhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 263 LSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 263 ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+||+.||...... .....+.. .....++.+.+||.+||+.||.+|||+.+++++
T Consensus 307 ltg~~Pf~~~~~~----~~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 307 WCADLPITKDAAL----GGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHSSCCC----------CCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHCCCCCcccccc----cchhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 9999886543111 11111111 012334668899999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=357.85 Aligned_cols=253 Identities=16% Similarity=0.181 Sum_probs=202.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC------CCCCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL------RHKRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~ 144 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++.... .....+.+|+.++..+ .|+||+++++++.....
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~---~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHK---VHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETT---TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cEEEEEEcccCccEEEEEEEECC---CCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 46788899999999999999987 78999999997532 1235677888888777 57799999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC--CeeecccCccc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD--PRLSCFGLMKN 222 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfg~a~~ 222 (512)
.++||||+. ++|.+++.......+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||++..
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 999999996 59999998656667999999999999999999999999 999999999999998887 99999999976
Q ss_pred cCC-CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc-------c----------chhh
Q 010340 223 SRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG-------K----------NILH 284 (512)
Q Consensus 223 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~-------~----------~~~~ 284 (512)
... .....||+.|+|||++.+..++.++|||||||++|||+||..||.......... . ....
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~ 331 (429)
T 3kvw_A 252 EHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKN 331 (429)
T ss_dssp TTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHH
T ss_pred cCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhh
Confidence 543 345678999999999999999999999999999999999998776432111000 0 0000
Q ss_pred hcccc--------------------------------cCCC----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 285 LMDSH--------------------------------LEGN----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 285 ~~~~~--------------------------------~~~~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+... .... ++...++.+.+||.+||+.||++|||+.++++|-+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw 411 (429)
T 3kvw_A 332 FVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW 411 (429)
T ss_dssp HBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred ccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChh
Confidence 00000 0000 00112466889999999999999999999999854
Q ss_pred c
Q 010340 329 P 329 (512)
Q Consensus 329 ~ 329 (512)
-
T Consensus 412 ~ 412 (429)
T 3kvw_A 412 L 412 (429)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=349.53 Aligned_cols=248 Identities=12% Similarity=0.096 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC---CCCccceEEEEeeCCe
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR---HKRLANLIGYCCDGDE 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~ 144 (512)
..|.+++.||+|+||.||+|.+.. ...+++.||||++... ....+.+|+.++..++ |+||+++++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 456678889999999999995322 1126788999999754 3567888999988886 9999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-----------CC
Q 010340 145 RLLVAEYMPNDTLAKHLFHW---ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-----------NG 210 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-----------~~ 210 (512)
.+|||||+++|+|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999642 3567999999999999999999999999 999999999999998 89
Q ss_pred CCeeecccCccccC---C---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhh
Q 010340 211 DPRLSCFGLMKNSR---D---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH 284 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~ 284 (512)
.+||+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||...... ..
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~ 293 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-------EC 293 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-------EE
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-------ce
Confidence 99999999996532 1 13456899999999999999999999999999999999999886533111 00
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhhccCCCCC-CChHHHHHHhcccc
Q 010340 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRER-PNTKDLVSTLAPLQ 331 (512)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R-ps~~~vl~~L~~~~ 331 (512)
.....+... + .++.+.+++..||+.+|.+| |++.++.+.|+.+.
T Consensus 294 ~~~~~~~~~-~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 294 KPEGLFRRL-P--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp EECSCCTTC-S--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred eechhcccc-C--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 011111111 1 24557789999999999999 67888888887654
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=356.65 Aligned_cols=249 Identities=19% Similarity=0.225 Sum_probs=195.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee--------
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD-------- 141 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 141 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++.... ....+|+.+|+.++||||+++++++..
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIE---SGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETT---TCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ceEEEEEEEEeccCEEEEEEEECC---CCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 356788899999999999999987 78899999987543 234579999999999999999999854
Q ss_pred ------------------------------CCeeEEEEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHh
Q 010340 142 ------------------------------GDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCS 189 (512)
Q Consensus 142 ------------------------------~~~~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH 189 (512)
....++||||+++ +|.+.+.. .....+++..++.++.||+.||.|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3348899999985 88887753 25678999999999999999999999
Q ss_pred cCCCccccccCccceeec-CCCCCeeecccCccccCC---CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHh
Q 010340 190 SEGRPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNSRD---GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLS 264 (512)
Q Consensus 190 ~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~~---~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~ellt 264 (512)
+.+ |+||||||+|||++ .++.+||+|||+++.... .....+|+.|+|||++.+.. ++.++|||||||++|||++
T Consensus 159 ~~g-i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 159 SLG-ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TTT-EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred HCc-CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 999 99999999999997 688999999999986543 23457899999999987754 8999999999999999999
Q ss_pred CCCCCChhhHHHHhccchh------------------hhc-----ccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChH
Q 010340 265 GKHIPPSHALDMIRGKNIL------------------HLM-----DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK 321 (512)
Q Consensus 265 g~~~~~~~~~~~~~~~~~~------------------~~~-----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 321 (512)
|+.||............+. ... .......++...+..+.+|+.+||+.||.+|||+.
T Consensus 238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 317 (383)
T 3eb0_A 238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY 317 (383)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 9988764321110000000 000 00000012333566789999999999999999999
Q ss_pred HHHHHh
Q 010340 322 DLVSTL 327 (512)
Q Consensus 322 ~vl~~L 327 (512)
++++|-
T Consensus 318 e~l~hp 323 (383)
T 3eb0_A 318 EAMAHP 323 (383)
T ss_dssp HHHTSG
T ss_pred HHhcCH
Confidence 999874
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=350.68 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=193.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCC----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 143 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hheeEeeeeEecCCEEEEEEEECC---CCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 467788999999999999999987 78899999997543222 356889999999999999999999998654
Q ss_pred --eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 144 --ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 144 --~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
..++||||+++ +|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ccceEEEEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 78999999975 7888885 35899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc-----------------
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN----------------- 281 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~----------------- 281 (512)
..... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||............
T Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 255 (371)
T 2xrw_A 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred ccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 65432 3457899999999999989999999999999999999999887643211000000
Q ss_pred ----------------hhhhcccccCCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 282 ----------------ILHLMDSHLEGN---FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 282 ----------------~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..........+. .....+..+.+||.+||..||.+|||+.++++|-.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 000000000000 01233677999999999999999999999999854
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=337.23 Aligned_cols=248 Identities=21% Similarity=0.240 Sum_probs=199.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
...|.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 86 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQL---TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF 86 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECC---CCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence 3467788899999999999999987 78899999987542 23346789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++.....
T Consensus 87 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 999999999999999974 356899999999999999999999999 99999999999999999999999999876544
Q ss_pred C---CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 226 G---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
. ....+|+.|+|||++.+..+ +.++||||||+++|+|++|+.|+......... ..+... ....+...+..
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~ 237 (276)
T 2h6d_A 164 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF-----KKIRGG-VFYIPEYLNRS 237 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-----HHHHHC-CCCCCTTSCHH
T ss_pred CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH-----HHhhcC-cccCchhcCHH
Confidence 3 24467899999999987765 68999999999999999999886543221111 000000 11233445567
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+.+++.+||+.||.+|||+.+++++-.
T Consensus 238 l~~li~~~l~~~p~~Rps~~~~l~h~~ 264 (276)
T 2h6d_A 238 VATLLMHMLQVDPLKRATIKDIREHEW 264 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHHHccCChhhCCCHHHHHhChh
Confidence 889999999999999999999999744
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=342.81 Aligned_cols=255 Identities=15% Similarity=0.135 Sum_probs=203.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEE-eeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYC-CDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv 148 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++..... .+.+.+|+.++..++|++++..+.++ ......++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cEEEEEEEEccCCCeEEEEEEEcC---CCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 356788889999999999999877 889999999876542 35799999999999988876666655 567788999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee---cCCCCCeeecccCccccCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~~~ 225 (512)
|||+ +++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||+ +.++.+||+|||++.....
T Consensus 84 ~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 84 MELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 9999 8999999964 4567999999999999999999999999 9999999999999 4889999999999876543
Q ss_pred C-----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC-
Q 010340 226 G-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN- 293 (512)
Q Consensus 226 ~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (512)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMSTPI 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHSCH
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch-hhhhhhhhhcccccCCch
Confidence 2 3456899999999999989999999999999999999999887532100 00000011111001000
Q ss_pred --CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 294 --FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 294 --~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.....++.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 1123456688999999999999999999999999887543
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=349.24 Aligned_cols=247 Identities=20% Similarity=0.203 Sum_probs=201.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--------hhHHHHHHHHHhcC-CCCCccceEEEEee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKL-RHKRLANLIGYCCD 141 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 141 (512)
.|.+++.||.|+||.||+|.+.. +++.||||++....... .+.+.+|+.++.++ +||||+++++++..
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 171 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRA---TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred hcccceEEecCCCEEEEEEEECC---CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence 46677889999999999999986 78899999987654221 24578999999999 89999999999999
Q ss_pred CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.+..++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++.
T Consensus 172 ~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~ 248 (365)
T 2y7j_A 172 SSFMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSC 248 (365)
T ss_dssp SSEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCEEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCccc
Confidence 9999999999999999999973 457999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccccCcccCCcccccC------CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRN------GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
..... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ..+.......
T Consensus 249 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~----~~i~~~~~~~ 324 (365)
T 2y7j_A 249 HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML----RMIMEGQYQF 324 (365)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCC
T ss_pred ccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCC
Confidence 65443 34578999999999863 35888999999999999999999887543211110 0111110100
Q ss_pred CCC--HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 293 NFS--SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 293 ~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..+ ...+..+.+|+.+||+.||++|||+.+++++-
T Consensus 325 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 361 (365)
T 2y7j_A 325 SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP 361 (365)
T ss_dssp CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 000 12345688999999999999999999999874
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=353.10 Aligned_cols=251 Identities=18% Similarity=0.209 Sum_probs=184.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeC-----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 142 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+|+.++||||+++++++...
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETT---TTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CceEEeeEEeecCCeEEEEEEECC---CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 457788999999999999999887 8899999999764322 235788999999999999999999999754
Q ss_pred -CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
...++|||++ +++|.+++. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CCeEEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 5679999999 789999885 367999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCC-CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------ccch----------
Q 010340 222 NSRD-GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------GKNI---------- 282 (512)
Q Consensus 222 ~~~~-~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~~~---------- 282 (512)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......... +...
T Consensus 181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~ 260 (367)
T 2fst_X 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260 (367)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred cccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence 6543 345678999999999977 67899999999999999999999887643211000 0000
Q ss_pred --hhhccccc-CCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 283 --LHLMDSHL-EGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 283 --~~~~~~~~-~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+.... ....+ ...++.+.+|+.+||..||.+|||+.++++|-.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~ 314 (367)
T 2fst_X 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314 (367)
T ss_dssp HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence 00000000 00001 123466889999999999999999999999844
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=341.40 Aligned_cols=251 Identities=19% Similarity=0.211 Sum_probs=189.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.++.+++.||+|+||.||+|.+.. +++.||||++....... .+.+..+...++.++||||+++++++.+.+..++
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVP---SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecC---CCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 456788899999999999999987 88999999997653222 1234455556888899999999999999999999
Q ss_pred EEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccC
Q 010340 148 VAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
||||+++ +|.+++.. .....+++..++.++.||+.||.|||++ + ++||||||+|||++.++.+||+|||++....
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9999975 88887753 2456799999999999999999999998 8 9999999999999999999999999987654
Q ss_pred CC---CccccCcccCCcccc----cCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 225 DG---KSYSTNLAYTPPEYL----RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 225 ~~---~~~~~t~~y~aPE~~----~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
.. ....||+.|+|||++ .+..++.++|||||||++|+|+||+.|+........ .................
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~ 238 (290)
T 3fme_A 162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ---QLKQVVEEPSPQLPADK 238 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH---HHHHHHHSCCCCCCTTT
T ss_pred ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH---HHHHHhccCCCCccccc
Confidence 32 234689999999996 456689999999999999999999988753211111 11111111112222234
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.+..+.+|+.+||+.||++|||+.+++++-.
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 239 FSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 5667899999999999999999999998643
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=340.86 Aligned_cols=253 Identities=15% Similarity=0.129 Sum_probs=200.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEE-eeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYC-CDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 149 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+|+.++..++|++++..++.+ ......++||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ceEEeeeecCCCCeEEEEEEEcC---CCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 45678889999999999999877 788999998765432 34689999999999988877776665 6678889999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee---cCCCCCeeecccCccccCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~ 226 (512)
||+ +++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 85 e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 85 ELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp ECC-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred Ecc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 999 8999999964 3567999999999999999999999999 9999999999999 78899999999999765432
Q ss_pred -----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC--
Q 010340 227 -----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN-- 293 (512)
Q Consensus 227 -----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (512)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ........+........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHSCHH
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh-hhhhhhhhhhcccccchhh
Confidence 2456899999999999989999999999999999999999887542100 00000111111111100
Q ss_pred -CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 294 -FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 294 -~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.....++.+.+|+.+||+.||++|||+.++++.|+.+..
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 241 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 012235678899999999999999999999999988764
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-43 Score=343.34 Aligned_cols=245 Identities=20% Similarity=0.221 Sum_probs=196.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--------CChhHHHHHHHHHhcCCCCCccceEEEEeeC
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--------PDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 142 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++..... .....+.+|+.+++.++||||+++++++...
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERK---TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred ceeEeeEEecCCCEEEEEEEEcC---CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 46688899999999999999987 789999999975432 1124588999999999999999999999765
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC---CeeecccC
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGL 219 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfg~ 219 (512)
. .++||||+++++|.+++. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++. +||+|||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp S-EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred c-eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 4 899999999999999986 4567999999999999999999999999 999999999999986654 99999999
Q ss_pred ccccCCCC---ccccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCC
Q 010340 220 MKNSRDGK---SYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGN 293 (512)
Q Consensus 220 a~~~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (512)
+....... ...||+.|+|||++. ...++.++|||||||++|+|++|..||...... ......+..... .
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~-~ 238 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQITSGKY-N 238 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHHHHHHTCC-C
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHHHHHhCcc-c
Confidence 98765432 346899999999974 456899999999999999999999886532110 011111111111 1
Q ss_pred CC----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 294 FS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 294 ~~----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.. ...+..+.+|+.+||+.||.+|||+.+++++-
T Consensus 239 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~ 276 (322)
T 2ycf_A 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 276 (322)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCc
Confidence 11 12356788999999999999999999999863
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=348.63 Aligned_cols=251 Identities=18% Similarity=0.231 Sum_probs=200.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhc--CCCCCccceEEEEeeCC----e
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGK--LRHKRLANLIGYCCDGD----E 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~ 144 (512)
.+.+++.||+|+||.||+|.+ +++.||||++... ....+.+|++++.. ++||||+++++++.... .
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred cEEEEeeecCCCCcEEEEEEE-----cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 455778899999999999987 4678999999754 24678889999887 79999999999998875 7
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCccccccCccceeecCCCCCeeec
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS--------SEGRPLYHDLNAYRVLFDENGDPRLSC 216 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~D 216 (512)
.++||||+++|+|.+++.. ..+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|
T Consensus 115 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~D 190 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIAD 190 (342)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECC
T ss_pred eEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEE
Confidence 8999999999999999963 46999999999999999999999 788 99999999999999999999999
Q ss_pred ccCccccCCC--------CccccCcccCCcccccCC------CCCCCCcEEehHHHHHHHHhC----------CCCCChh
Q 010340 217 FGLMKNSRDG--------KSYSTNLAYTPPEYLRNG------RVTPESVIFSFGTVLLDLLSG----------KHIPPSH 272 (512)
Q Consensus 217 fg~a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~~~~~~~ 272 (512)
||++...... ....||+.|+|||++.+. .++.++|||||||++|||+|| ..||...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~ 270 (342)
T 1b6c_B 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270 (342)
T ss_dssp CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence 9998764432 334689999999999765 234689999999999999999 5554332
Q ss_pred hHHHHhccchh-hhcccccCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 273 ALDMIRGKNIL-HLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 273 ~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.........+. .+........++ ..++..+.+|+.+||+.||++|||+.+++++|+.+...
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 271 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 10000000011 111122222333 36677899999999999999999999999999987644
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=347.77 Aligned_cols=251 Identities=15% Similarity=0.113 Sum_probs=177.1
Q ss_pred cccccc-cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee----CCee
Q 010340 71 SDFIVS-ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDER 145 (512)
Q Consensus 71 ~~~~i~-~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 145 (512)
.|.+++ .||+|+||.||+|.+.. +++.||||++... ..........+..++||||+++++++.. ....
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRR---TGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECC---CCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 455656 48999999999999987 7889999998642 2223333344566799999999999976 4558
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCccc
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKN 222 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a~~ 222 (512)
++||||+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++..
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 99999999999999998655567999999999999999999999999 999999999999975 45599999999976
Q ss_pred cCCC--CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc--cccCCCCCHHH
Q 010340 223 SRDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD--SHLEGNFSSEE 298 (512)
Q Consensus 223 ~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 298 (512)
.... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...............+.. ...........
T Consensus 181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (336)
T 3fhr_A 181 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 260 (336)
T ss_dssp C----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTC
T ss_pred ccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccC
Confidence 5432 3456799999999998888999999999999999999999887543222111111111111 11111122345
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
+..+.+|+.+||+.||.+|||+.+++++-+-
T Consensus 261 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 291 (336)
T 3fhr_A 261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291 (336)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence 6778999999999999999999999998553
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=358.97 Aligned_cols=249 Identities=23% Similarity=0.254 Sum_probs=193.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeC------Ce
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG------DE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 144 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+|+++|+.++|||||+++++|... ..
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~---~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECC---CCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 36678889999999999999987 78899999986543 2345799999999999999999998542 23
Q ss_pred eEEEEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-CCCeeecccCcc
Q 010340 145 RLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMK 221 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfg~a~ 221 (512)
+++||||+++ +|.+++.. .....+++..++.++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 6799999976 67776643 24577999999999999999999999999 9999999999999955 568999999998
Q ss_pred ccCC---CCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc-----------chhhhc
Q 010340 222 NSRD---GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK-----------NILHLM 286 (512)
Q Consensus 222 ~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-----------~~~~~~ 286 (512)
.... .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||........... .+....
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 6533 2346789999999999765 689999999999999999999988764321100000 000000
Q ss_pred c-------cccCC-----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 287 D-------SHLEG-----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 287 ~-------~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
. +.... .++...++.+.+||.+||..||.+|||+.++++|-.
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~ 339 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence 0 00000 012334577899999999999999999999998754
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-43 Score=337.55 Aligned_cols=251 Identities=17% Similarity=0.146 Sum_probs=205.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---------hhHHHHHHHHHhcCC-CCCccceEE
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---------PKQFADEAWGVGKLR-HKRLANLIG 137 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-h~niv~l~~ 137 (512)
-+..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++++. ||||+++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKP---TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 91 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcC---cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence 34567788899999999999999987 78999999997653211 246789999999995 999999999
Q ss_pred EEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 138 YCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 138 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
++......++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 92 TYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCC
T ss_pred eeccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999999973 457999999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCC---CccccCcccCCccccc------CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc
Q 010340 218 GLMKNSRDG---KSYSTNLAYTPPEYLR------NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 218 g~a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
|++...... ....+|+.|+|||++. ...++.++||||||+++|+|++|+.|+......... ..+...
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~ 244 (298)
T 1phk_A 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML----RMIMSG 244 (298)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHT
T ss_pred cchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH----HHHhcC
Confidence 998765433 2456899999999985 456889999999999999999999886543221111 011111
Q ss_pred cc--CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 289 HL--EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 289 ~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.. ........+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 245 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (298)
T 1phk_A 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286 (298)
T ss_dssp CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChH
Confidence 11 11112345677899999999999999999999998643
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=338.45 Aligned_cols=248 Identities=20% Similarity=0.255 Sum_probs=195.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee---------
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--------- 141 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 141 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNAL---DSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cchhhheeccCCcEEEEEEEEcC---CCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 45678889999999999999887 78899999996432 224578999999999999999999999865
Q ss_pred ----CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 142 ----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 142 ----~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
....++||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++|+||||+|||++.++.+||+||
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeC
Confidence 3568999999999999999975 4456889999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCC------------------CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh
Q 010340 218 GLMKNSRDG------------------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR 278 (512)
Q Consensus 218 g~a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~ 278 (512)
|++...... ....||+.|+|||++.+. .++.++|||||||++|+|++ |+.........
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~ 237 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHH
Confidence 998764321 234578999999999764 68999999999999999998 33322111100
Q ss_pred ccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 279 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+. .........++...+..+.+|+.+||+.||.+|||+.+++++-+
T Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (303)
T 1zy4_A 238 LKKLR-SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW 286 (303)
T ss_dssp HHHHH-STTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSC
T ss_pred HHhcc-ccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCC
Confidence 01111 11112233445556677889999999999999999999999744
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=373.10 Aligned_cols=254 Identities=19% Similarity=0.273 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
..+.+++.||+|+||.||+|.+......+..||||++....... .+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 34667788999999999999987654457789999987543222 357999999999999999999999985 4568999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC-
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 227 (512)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999999974 3456999999999999999999999999 9999999999999999999999999998764432
Q ss_pred ----ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 228 ----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ....+........+..+++.+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-----VIGRIENGERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHHTCCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH-----HHHHHHcCCCCCCCccccHHH
Confidence 2345788999999988899999999999999999997 776654322111 111111112233455667789
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 99999999999999999999999998764
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=355.23 Aligned_cols=252 Identities=15% Similarity=0.169 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC--------CCCccceEEEEe-
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR--------HKRLANLIGYCC- 140 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~- 140 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++.... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQ---GKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecC---CCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 457788999999999999999987 78999999997432 12457889999999985 788999999997
Q ss_pred ---eCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCC------
Q 010340 141 ---DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENG------ 210 (512)
Q Consensus 141 ---~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~------ 210 (512)
.....+|||||+ +++|.+.+.......+++..++.|+.||+.||.|||++ + |+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhh
Confidence 456799999999 56777777654556799999999999999999999998 8 99999999999998775
Q ss_pred -------------------------------------------CCeeecccCccccCC-CCccccCcccCCcccccCCCC
Q 010340 211 -------------------------------------------DPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRV 246 (512)
Q Consensus 211 -------------------------------------------~~kl~Dfg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~ 246 (512)
.+||+|||++..... .....||+.|+|||++.+..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCC
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCC
Confidence 899999999976543 345578999999999999899
Q ss_pred CCCCcEEehHHHHHHHHhCCCCCChhhHH-----HHhccchhhhccc---------------------------------
Q 010340 247 TPESVIFSFGTVLLDLLSGKHIPPSHALD-----MIRGKNILHLMDS--------------------------------- 288 (512)
Q Consensus 247 ~~~~Dv~slG~~l~elltg~~~~~~~~~~-----~~~~~~~~~~~~~--------------------------------- 288 (512)
+.++|||||||++|||+||+.||...... ......+......
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 99999999999999999999887532100 0000000000000
Q ss_pred ----ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 289 ----HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 289 ----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.-...++...+..+.+||.+||+.||++|||+.++++|-
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 001134567788899999999999999999999999874
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=340.00 Aligned_cols=253 Identities=21% Similarity=0.266 Sum_probs=198.9
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
.+..+.+++.||+|+||.||+|.+.. .||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG------EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL 104 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS------SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC------eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence 35677889999999999999999853 2999999764332 235688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++ ++.+||+|||++.....
T Consensus 105 ~iv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EEECBCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred EEEeecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 999999999999999964 3456999999999999999999999999 99999999999998 68999999999765421
Q ss_pred ---------CCccccCcccCCcccccC---------CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc
Q 010340 226 ---------GKSYSTNLAYTPPEYLRN---------GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD 287 (512)
Q Consensus 226 ---------~~~~~~t~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~ 287 (512)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .+..
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~ 257 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW----QMGT 257 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH----HHHT
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----Hhcc
Confidence 123357899999999864 347889999999999999999998875432221111 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 288 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 288 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
...........+..+.+++.+||..||.+|||+.++++.|+.+...
T Consensus 258 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111123445688999999999999999999999999988754
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=351.00 Aligned_cols=251 Identities=20% Similarity=0.220 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeC-----Ce
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDG-----DE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 144 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|++++.+++||||+++++++... ..
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNL---NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cEEEEEEeecCCCeEEEEEEECC---CCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 57788899999999999999987 78899999997543222 35688999999999999999999999764 46
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+.+ +|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 105 ~~iv~e~~~~-~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEEECCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEcccCc-CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 8999999974 99999953 46999999999999999999999999 9999999999999999999999999997654
Q ss_pred CC-------CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc-------chh------
Q 010340 225 DG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK-------NIL------ 283 (512)
Q Consensus 225 ~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-------~~~------ 283 (512)
.. ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||........... ...
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 22 345789999999987654 489999999999999999999988754311100000 000
Q ss_pred ------hhccc-ccCCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 284 ------HLMDS-HLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 284 ------~~~~~-~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
..... ...... .+..+..+.+||.+||+.||.+|||+.+++++-.-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 317 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcch
Confidence 00000 000011 12335678899999999999999999999988543
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=351.19 Aligned_cols=253 Identities=18% Similarity=0.231 Sum_probs=183.7
Q ss_pred cccc-cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee--CCeeEEEE
Q 010340 73 FIVS-ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLLVA 149 (512)
Q Consensus 73 ~~i~-~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 149 (512)
.+.+ .||+|+||.||+|.+.++. +++.||||++.... ....+.+|+.+|+.++||||+++++++.. ....+|||
T Consensus 23 ~~~g~~lG~G~~g~Vy~~~~~~~~-~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 23 EYEGCKVGRGTYGHVYKAKRKDGK-DDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp ECSSCCCC-----EEEEEEESSSS-CCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhcCcEeeecCCeEEEEEEEccCC-CCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 3434 6999999999999977432 57889999997543 23578999999999999999999999954 67899999
Q ss_pred EccCCCCHHhhhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee----cCCCCCeeeccc
Q 010340 150 EYMPNDTLAKHLFHW-------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFG 218 (512)
Q Consensus 150 E~~~~g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfg 218 (512)
||+.+ +|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 99965 888887532 1235999999999999999999999999 9999999999999 678899999999
Q ss_pred CccccCC-------CCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc--------cch
Q 010340 219 LMKNSRD-------GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG--------KNI 282 (512)
Q Consensus 219 ~a~~~~~-------~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~--------~~~ 282 (512)
+++.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....+.... ..+
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 9976543 2345789999999999874 48999999999999999999998875321110000 000
Q ss_pred hhhcccc------------------------cCCCCC---------HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 283 LHLMDSH------------------------LEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 283 ~~~~~~~------------------------~~~~~~---------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
...+... ...... ...+..+.+||.+||..||.+|||+.++++|-+-
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f 337 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 0000000 000000 0114567899999999999999999999998664
Q ss_pred c
Q 010340 330 L 330 (512)
Q Consensus 330 ~ 330 (512)
.
T Consensus 338 ~ 338 (405)
T 3rgf_A 338 L 338 (405)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-43 Score=342.37 Aligned_cols=254 Identities=17% Similarity=0.190 Sum_probs=182.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHH-HHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..+.+++.||+|+||.||+|.+.. +++.||||++....... ...+..|+. +++.++||||+++++++.+.+..++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKP---SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETT---TTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcC---CCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 466788899999999999999987 78999999997653221 235666666 7778899999999999999999999
Q ss_pred EEEccCCCCHHhhhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCcccc
Q 010340 148 VAEYMPNDTLAKHLFH---WENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
||||+++ +|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+|||++.++.+||+|||+++..
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9999986 88887752 2356799999999999999999999998 8 999999999999999999999999999765
Q ss_pred CCC---CccccCcccCCcccc----cCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH
Q 010340 224 RDG---KSYSTNLAYTPPEYL----RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296 (512)
Q Consensus 224 ~~~---~~~~~t~~y~aPE~~----~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (512)
... ....||+.|+|||++ .+..++.++|||||||++|+|++|+.|+....................+......
T Consensus 177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3aln_A 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER 256 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSC
T ss_pred ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccc
Confidence 432 234689999999998 4566899999999999999999999887542211111111111111111111223
Q ss_pred HHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 297 ~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
..+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 257 ~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 288 (327)
T 3aln_A 257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPF 288 (327)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHHhChH
Confidence 45667899999999999999999999988743
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-43 Score=346.40 Aligned_cols=253 Identities=21% Similarity=0.234 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh-----------------hHHHHHHHHHhcCCCCCc
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-----------------KQFADEAWGVGKLRHKRL 132 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-----------------~~~~~E~~~l~~l~h~ni 132 (512)
..|.+++.||+|+||.||+|.+ +++.||||++........ +.+.+|+.++++++||||
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-----DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-----TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred CceEEEEEEcCCCCeEEEEEEc-----CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 5677889999999999999998 568899999975432211 789999999999999999
Q ss_pred cceEEEEeeCCeeEEEEEccCCCCHHhh------hhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCcccee
Q 010340 133 ANLIGYCCDGDERLLVAEYMPNDTLAKH------LFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVL 205 (512)
Q Consensus 133 v~l~~~~~~~~~~~lv~E~~~~g~L~~~------l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nil 205 (512)
+++++++.+.+..++||||+++|+|.++ +.......+++..++.++.||+.||.|||+ .+ ++|+||||+|||
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil 184 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNIL 184 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEE
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEE
Confidence 9999999999999999999999999998 654336789999999999999999999999 88 999999999999
Q ss_pred ecCCCCCeeecccCccccCCC--CccccCcccCCcccccCC-CCCC-CCcEEehHHHHHHHHhCCCCCChhhH-----HH
Q 010340 206 FDENGDPRLSCFGLMKNSRDG--KSYSTNLAYTPPEYLRNG-RVTP-ESVIFSFGTVLLDLLSGKHIPPSHAL-----DM 276 (512)
Q Consensus 206 l~~~~~~kl~Dfg~a~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~elltg~~~~~~~~~-----~~ 276 (512)
++.++.+||+|||++...... ....+|+.|+|||++.+. .++. ++|||||||++|+|++|+.||..... ..
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 264 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred EcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence 999999999999999865432 345789999999999877 5666 99999999999999999988754311 01
Q ss_pred Hhccchhhhcc--ccc-------CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 277 IRGKNILHLMD--SHL-------EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 277 ~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
........... ... ........+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~ 325 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence 10000000000 000 00001345667899999999999999999999998743
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=339.38 Aligned_cols=254 Identities=21% Similarity=0.259 Sum_probs=201.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcC---CCCCccceEEEEe----
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL---RHKRLANLIGYCC---- 140 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 140 (512)
..|.+++.||+|+||.||+|.+... +++.||||++...... ....+.+|+.+++.+ +||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred hceeeeeeecccccEEEEEEEecCC--CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3567888999999999999998532 6788999999754432 234677888888776 8999999999997
Q ss_pred -eCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 141 -DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 141 -~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
.....++||||++ |+|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcc
Confidence 4567899999997 59999998655567999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh-----------
Q 010340 220 MKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL----------- 285 (512)
Q Consensus 220 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~----------- 285 (512)
+...... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG-KILDVIGLPGEEDWPR 245 (326)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCCCCGGGSCT
T ss_pred cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHHHcCCCCcccCcc
Confidence 8765432 34567999999999998899999999999999999999998875432111100 00000
Q ss_pred --------ccc---ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 286 --------MDS---HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 286 --------~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
... .....+....+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 299 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 000 0000122345567889999999999999999999998743
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=341.18 Aligned_cols=250 Identities=17% Similarity=0.191 Sum_probs=192.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEe---------
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC--------- 140 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--------- 140 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++........+.+.+|+.+++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDND---CDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETT---TTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CceeEEEEeccCCCeEEEEEEECC---CCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 457788899999999999999987 78999999987654333567899999999999999999999873
Q ss_pred -----eCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec-CCCCCee
Q 010340 141 -----DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRL 214 (512)
Q Consensus 141 -----~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl 214 (512)
+....++||||++ |+|.+++. .+.+++..++.++.||+.||.|||+.+ ++||||||+|||++ .++.+||
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEE
T ss_pred cccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEE
Confidence 3467899999997 59999994 467999999999999999999999999 99999999999997 5679999
Q ss_pred ecccCccccCCC-------CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh-
Q 010340 215 SCFGLMKNSRDG-------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL- 285 (512)
Q Consensus 215 ~Dfg~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~- 285 (512)
+|||+++..... ....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.......... .+...
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~ 241 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ-LILESI 241 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHS
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhc
Confidence 999999865321 23456889999999865 678999999999999999999998875432111000 00000
Q ss_pred ------------------cccccC-CC-----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 286 ------------------MDSHLE-GN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 286 ------------------~~~~~~-~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...... .. ..+..+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHH
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcc
Confidence 000000 00 11234567899999999999999999999998744
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=341.24 Aligned_cols=251 Identities=17% Similarity=0.178 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCC------ccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR------LANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~ 143 (512)
..|.+++.||+|+||.||+|.+... +++.||||++.... ...+.+.+|+.++..++|+| |+++++++.+.+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKA--GGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred CceEEEEEEecCCCeEEEEEEecCC--CCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 3577888999999999999998432 67899999997532 12356889999999887654 999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---------------
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE--------------- 208 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~--------------- 208 (512)
..++||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccc
Confidence 999999999 889999998655567999999999999999999999999 999999999999987
Q ss_pred ----CCCCeeecccCccccCC-CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchh
Q 010340 209 ----NGDPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 209 ----~~~~kl~Dfg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~ 283 (512)
++.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|||++|..||......... ..+.
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~ 247 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL-AMME 247 (339)
T ss_dssp EEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH-HHHH
T ss_pred ccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH-HHHH
Confidence 67899999999986543 34567899999999999889999999999999999999999887643211100 0000
Q ss_pred hhcc--------------------------------------c-ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 010340 284 HLMD--------------------------------------S-HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 324 (512)
Q Consensus 284 ~~~~--------------------------------------~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl 324 (512)
.... . ..........++.+.+|+.+||+.||.+|||+.+++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 0000 0 000112345577899999999999999999999999
Q ss_pred HH
Q 010340 325 ST 326 (512)
Q Consensus 325 ~~ 326 (512)
++
T Consensus 328 ~h 329 (339)
T 1z57_A 328 KH 329 (339)
T ss_dssp TS
T ss_pred cC
Confidence 87
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=342.79 Aligned_cols=254 Identities=19% Similarity=0.224 Sum_probs=188.0
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCe----
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE---- 144 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 144 (512)
+..|.+++.||+|+||.||+|.+.. +++.||||++..... ....+.+|+..+..++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~ 97 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKS---TGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR 97 (360)
T ss_dssp HTTEEEC----------CEEEEETT---TCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred ccceEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence 3456788899999999999999987 788999999865432 33567888999999999999999999976433
Q ss_pred ---eEEEEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCccccccCccceeecC-CCCCeeec
Q 010340 145 ---RLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCS--SEGRPLYHDLNAYRVLFDE-NGDPRLSC 216 (512)
Q Consensus 145 ---~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~iiH~Dlkp~Nill~~-~~~~kl~D 216 (512)
.++||||+++ +|...+.. .....+++..+..++.||+.||.||| +.+ |+||||||+|||++. ++.+||+|
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECC
T ss_pred ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEee
Confidence 7899999986 55554432 24567899999999999999999999 888 999999999999996 89999999
Q ss_pred ccCccccCCC---CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccch-------hhh
Q 010340 217 FGLMKNSRDG---KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI-------LHL 285 (512)
Q Consensus 217 fg~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~-------~~~ 285 (512)
||+++..... ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||............. ...
T Consensus 176 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
T 3e3p_A 176 FGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV 255 (360)
T ss_dssp CTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred CCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHH
Confidence 9999865443 3456899999999987654 8999999999999999999998876432111100000 000
Q ss_pred cc-------------------cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 286 MD-------------------SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 286 ~~-------------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
+. .......+...+..+.+||.+||+.||.+|||+.++++|-.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 317 (360)
T 3e3p_A 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317 (360)
T ss_dssp HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence 00 00001112235678999999999999999999999998844
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=342.50 Aligned_cols=250 Identities=17% Similarity=0.187 Sum_probs=197.4
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeC-----Ce
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDG-----DE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 144 (512)
.+.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|+.+++.++||||+++++++... ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKP---TGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ceEEeeEEcCCCCeEEEEEEECC---CCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 56678889999999999999987 78999999997543211 34688999999999999999999998764 67
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+. ++|.+++.. ..+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 899999997 589999853 57999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC--------------CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc---------
Q 010340 225 DG--------------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK--------- 280 (512)
Q Consensus 225 ~~--------------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------- 280 (512)
.. ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 21 12467999999998765 6789999999999999999999988764321110000
Q ss_pred -----------chhhhccccc-CCC-----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 281 -----------NILHLMDSHL-EGN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 281 -----------~~~~~~~~~~-~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.......... ... ..+..++.+.+|+.+||+.||++|||+.+++++-.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 0000000000 000 01234567889999999999999999999998754
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=345.48 Aligned_cols=249 Identities=16% Similarity=0.201 Sum_probs=196.3
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCee---
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDER--- 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 145 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKR---SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cEEEEeEEecCCCeEEEEEEECC---CCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 56678889999999999999987 88999999998654322 35788999999999999999999999877654
Q ss_pred ---EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 146 ---LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 146 ---~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
++||||+. ++|.+++. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eeEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 58888773 34999999999999999999999999 99999999999999999999999999986
Q ss_pred cCCC-CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc-------------------
Q 010340 223 SRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN------------------- 281 (512)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~------------------- 281 (512)
.... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||............
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (371)
T 4exu_A 194 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273 (371)
T ss_dssp ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred cccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhh
Confidence 5443 35678999999999977 67899999999999999999999887643211100000
Q ss_pred ---hhhhcccccCCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 282 ---ILHLMDSHLEGN---FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 282 ---~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
............ ..+..++.+.+||.+||+.||++|||+.+++++-.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 000000000000 01234567899999999999999999999998854
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=346.26 Aligned_cols=254 Identities=18% Similarity=0.210 Sum_probs=203.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-----------CCCccceEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-----------HKRLANLIGY 138 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~ 138 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++.... ...+.+.+|+.++.+++ ||||++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMV---NNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecC---CCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 357788999999999999999987 78999999997532 12456889999999886 8999999999
Q ss_pred EeeCC----eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeec------
Q 010340 139 CCDGD----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFD------ 207 (512)
Q Consensus 139 ~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~------ 207 (512)
+...+ ..++||||+ +++|.+++.......+++..++.++.||+.||.|||++ + |+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTT
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCc
Confidence 98654 789999999 88999999865667799999999999999999999998 8 99999999999994
Q ss_pred CCCCCeeecccCccccCCC-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH-----hccc
Q 010340 208 ENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI-----RGKN 281 (512)
Q Consensus 208 ~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~-----~~~~ 281 (512)
..+.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||........ ....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 252 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252 (373)
T ss_dssp TEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred CcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHH
Confidence 4457999999999765433 455789999999999999999999999999999999999988764321000 0000
Q ss_pred hhhhcc------------------------c-------------ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 010340 282 ILHLMD------------------------S-------------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 324 (512)
Q Consensus 282 ~~~~~~------------------------~-------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl 324 (512)
+..... . .....++...+..+.+||.+||+.||.+|||+.+++
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 332 (373)
T 1q8y_A 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 332 (373)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHh
Confidence 000000 0 001234567788999999999999999999999999
Q ss_pred HHhcc
Q 010340 325 STLAP 329 (512)
Q Consensus 325 ~~L~~ 329 (512)
++-.-
T Consensus 333 ~hp~f 337 (373)
T 1q8y_A 333 NHPWL 337 (373)
T ss_dssp TCGGG
T ss_pred hChhh
Confidence 97543
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=332.42 Aligned_cols=246 Identities=19% Similarity=0.181 Sum_probs=200.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+....++|
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRI---TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceeeEEEcCCCCEEEEEEEEcC---CCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 56688899999999999999987 788899999875432 3456899999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC---CCCeeecccCccccCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGLMKNSRD 225 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfg~a~~~~~ 225 (512)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++|+||||+|||++.+ +.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 999999999998863 356999999999999999999999999 9999999999999754 4699999999876544
Q ss_pred C---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCC--CHHHHH
Q 010340 226 G---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNF--SSEEAT 300 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 300 (512)
. ....+|+.|+|||++.+ .++.++||||||+++|+|++|..|+......... ..+......... ....+.
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 251 (287)
T 2wei_A 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISD 251 (287)
T ss_dssp CSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCCCCCSGGGTTSCH
T ss_pred CCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCCCCCchhhhhcCH
Confidence 3 23457899999999865 5899999999999999999999887543221111 011111111111 123456
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.+.+++.+||..||.+|||+.+++++-
T Consensus 252 ~~~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 252 DAKDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHHHcccChhhCcCHHHHhcCH
Confidence 788999999999999999999999864
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=346.43 Aligned_cols=259 Identities=18% Similarity=0.198 Sum_probs=194.6
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-----------hhHHHHHHHHHhcCC
Q 010340 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----------PKQFADEAWGVGKLR 128 (512)
Q Consensus 60 ~~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~ 128 (512)
.++....+ .|.+++.||+|+||.||+|.+. +++.||||++....... .+.+.+|+.++++++
T Consensus 15 ~~~~~~~~---~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 87 (362)
T 3pg1_A 15 AELHAMQS---PYTVQRFISSGSYGAVCAGVDS----EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87 (362)
T ss_dssp HHHHHTTC---SCEEEEEEEEETTEEEEEEECT----TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhcc---ceEEeEEeccCCCEEEEEEECC----CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC
Confidence 34444444 4557888899999999999986 57889999997644322 157899999999999
Q ss_pred CCCccceEEEEee-----CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccc
Q 010340 129 HKRLANLIGYCCD-----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203 (512)
Q Consensus 129 h~niv~l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~N 203 (512)
||||+++++++.. ....++||||++ |+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|
T Consensus 88 h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~N 164 (362)
T 3pg1_A 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGN 164 (362)
T ss_dssp CTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGG
T ss_pred CcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHH
Confidence 9999999999954 336899999997 588888864 4557999999999999999999999999 9999999999
Q ss_pred eeecCCCCCeeecccCccccCC---CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc
Q 010340 204 VLFDENGDPRLSCFGLMKNSRD---GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG 279 (512)
Q Consensus 204 ill~~~~~~kl~Dfg~a~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~ 279 (512)
||++.++.+||+|||++..... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||..........
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp EEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999999999975433 234568899999999977 668999999999999999999998876432111000
Q ss_pred cc-------------------hhhhcccccCC-------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 280 KN-------------------ILHLMDSHLEG-------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 280 ~~-------------------~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.. ........... ...+..++.+.+||.+||+.||.+|||+.++++|-.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 00 00000000000 011233566889999999999999999999998744
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=349.69 Aligned_cols=247 Identities=22% Similarity=0.273 Sum_probs=190.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCe------
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE------ 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 144 (512)
.|.+++.||+|+||.||+|.+.. +++ ||+|++.... ....+|+.+|+.++||||+++++++...+.
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~---~~~-~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVE---SDE-VAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT---TEE-EEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECC---CCe-EEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 46788899999999999999875 444 8888876433 223479999999999999999999965433
Q ss_pred eEEEEEccCCCCHHhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec-CCCCCeeecccCcc
Q 010340 145 RLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFGLMK 221 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg~a~ 221 (512)
.++||||++++ |...+.. .....+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 113 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 113 LNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 78999999874 4444431 23567999999999999999999999999 99999999999999 79999999999998
Q ss_pred ccCC---CCccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc-----------hhh--
Q 010340 222 NSRD---GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN-----------ILH-- 284 (512)
Q Consensus 222 ~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-----------~~~-- 284 (512)
.... .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||............ +..
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 6533 2356789999999999765 4899999999999999999999887653211000000 000
Q ss_pred --hccccc---C-----CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 285 --LMDSHL---E-----GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 285 --~~~~~~---~-----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
...... . ..++...++.+.+|+.+||+.||.+|||+.++++|-
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 323 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHP 323 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcCh
Confidence 000000 0 011223556799999999999999999999999984
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-42 Score=342.55 Aligned_cols=196 Identities=17% Similarity=0.162 Sum_probs=170.1
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CC-----CccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HK-----RLANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~ 143 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++.... .....+.+|+.++..++ |+ +|+++++++...+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRV---EQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeEEEEEEEeecCCEEEEEEEEcC---CCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 467788899999999999999987 78899999997432 12356788999988884 55 4999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCccccccCccceeec--CCCCCeeecccC
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS--EGRPLYHDLNAYRVLFD--ENGDPRLSCFGL 219 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~--~~~iiH~Dlkp~Nill~--~~~~~kl~Dfg~ 219 (512)
..+|||||+.+ +|.+++.......+++..++.++.||+.||.|||+ .+ |+||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 99999999965 99999986555679999999999999999999995 56 99999999999995 578899999999
Q ss_pred ccccCCC-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCCh
Q 010340 220 MKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPS 271 (512)
Q Consensus 220 a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~ 271 (512)
++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 208 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 208 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9876543 456789999999999999999999999999999999999988764
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=339.08 Aligned_cols=242 Identities=21% Similarity=0.297 Sum_probs=202.5
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC------hhHHHHHHHHHhcCC--CCCccceEEEEe
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD------PKQFADEAWGVGKLR--HKRLANLIGYCC 140 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~E~~~l~~l~--h~niv~l~~~~~ 140 (512)
...|.+++.||+|+||.||+|.+.. +++.||||++....... ...+.+|+.++++++ ||||+++++++.
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVS---DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETT---TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred cCceEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3457788899999999999999887 78999999998654332 246788999999996 599999999999
Q ss_pred eCCeeEEEEEccCC-CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec-CCCCCeeeccc
Q 010340 141 DGDERLLVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFG 218 (512)
Q Consensus 141 ~~~~~~lv~E~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg 218 (512)
..+..++|||++.+ ++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cCCcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999999986 899999973 467999999999999999999999999 99999999999999 78999999999
Q ss_pred CccccCCC--CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 219 LMKNSRDG--KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 219 ~a~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
++...... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... .... ...++
T Consensus 196 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~-----------~~~~~ 263 (320)
T 3a99_A 196 SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-IIRG-----------QVFFR 263 (320)
T ss_dssp TCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-HHHC-----------CCCCS
T ss_pred cccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-hhcc-----------ccccc
Confidence 98865443 34568999999999987665 6789999999999999999988654321 1110 01122
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...++.+.+||.+||+.||.+|||+.+++++-.
T Consensus 264 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~ 296 (320)
T 3a99_A 264 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296 (320)
T ss_dssp SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence 334566889999999999999999999998744
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=338.65 Aligned_cols=250 Identities=16% Similarity=0.202 Sum_probs=197.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCe---
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDE--- 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 144 (512)
..|.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKR---SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred ceEEEeeeEecCCCeEEEEEEECC---CCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 356678889999999999999987 78999999997644322 3568899999999999999999999987654
Q ss_pred ---eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 145 ---RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 145 ---~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.++||||+. ++|.+++. ..+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++.
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred ceeEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeeccccc
Confidence 499999997 58888774 34999999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC-CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc-------------------
Q 010340 222 NSRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK------------------- 280 (512)
Q Consensus 222 ~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------------------- 280 (512)
..... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 175 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 254 (353)
T 3coi_A 175 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 254 (353)
T ss_dssp C--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred CCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence 65432 34578999999999877 6789999999999999999999988754321110000
Q ss_pred ---chhhhcccccC---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 281 ---NILHLMDSHLE---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 281 ---~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
.....+..... ....+..++.+.+||.+||..||.+|||+.+++++-.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 308 (353)
T 3coi_A 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308 (353)
T ss_dssp HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 00000000001 1122345677999999999999999999999998744
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=338.04 Aligned_cols=240 Identities=19% Similarity=0.273 Sum_probs=195.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------ChhHHHHHHHHHhcC----CCCCccceEEEEe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKL----RHKRLANLIGYCC 140 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~~~~ 140 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.++.++ +||||+++++++.
T Consensus 32 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 32 EYRLGPLLGKGGFGTVFAGHRLT---DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp -CEEEEEEEEETTEEEEEEECTT---TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred ceEEeeEEEcCCCEEEEEEEEcc---CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 46678889999999999999877 7889999999765432 223567799999988 8999999999999
Q ss_pred eCCeeEEEEEc-cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec-CCCCCeeeccc
Q 010340 141 DGDERLLVAEY-MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFG 218 (512)
Q Consensus 141 ~~~~~~lv~E~-~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg 218 (512)
..+..++|||+ +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++ .++.+||+|||
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCS
T ss_pred cCCeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcc
Confidence 99999999999 789999999974 456999999999999999999999999 99999999999999 88999999999
Q ss_pred CccccCCC--CccccCcccCCcccccCCCCC-CCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 219 LMKNSRDG--KSYSTNLAYTPPEYLRNGRVT-PESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 219 ~a~~~~~~--~~~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
++...... ....+|+.|+|||++.+..+. .++|||||||++|+|++|+.||...... . . ....++
T Consensus 186 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~---------~--~~~~~~ 253 (312)
T 2iwi_A 186 SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI-L---------E--AELHFP 253 (312)
T ss_dssp SCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-H---------H--TCCCCC
T ss_pred hhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH-h---------h--hccCCc
Confidence 98765443 345689999999999776664 5899999999999999999876543211 1 0 011233
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+..+.+||.+||+.||++|||+.+++++-.
T Consensus 254 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 254 AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 445667889999999999999999999999754
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=335.12 Aligned_cols=247 Identities=19% Similarity=0.271 Sum_probs=197.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCC--CCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLR--HKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~ 146 (512)
.|.+++.||+|+||.||++.+. +++.||||++....... .+.+.+|+.++.+++ ||||+++++++...+..+
T Consensus 29 ~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 29 IYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp EEEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eEEEEEEecCCCCEEEEEEEcC----CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 4678889999999999999885 57789999997654322 357899999999996 599999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||| +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||+++ +.+||+|||++......
T Consensus 105 lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEEC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred EEEe-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 9999 557899999973 467899999999999999999999999 999999999999964 89999999999765432
Q ss_pred ------CccccCcccCCcccccC-----------CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc
Q 010340 227 ------KSYSTNLAYTPPEYLRN-----------GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH 289 (512)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... ..........
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~ 256 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPN 256 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTT
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH---HHHHHHHhcc
Confidence 23468999999999865 468889999999999999999998865421111 1112222222
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
....++...+..+.+|+.+||+.||.+|||+.+++++..-
T Consensus 257 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~ 296 (313)
T 3cek_A 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296 (313)
T ss_dssp SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccc
Confidence 2333444445678899999999999999999999998654
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=336.72 Aligned_cols=253 Identities=17% Similarity=0.144 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCC------ccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR------LANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~ 143 (512)
..|.+++.||+|+||.||+|.+... +++.||||++.... ...+.+.+|+.+++.++|++ ++.+++++...+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHAR--GKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred ccEEEEEEeeccCCeEEEEEEecCC--CceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 3577888999999999999998762 33789999997532 12456888999999997766 999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceee-----------------
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----------------- 206 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill----------------- 206 (512)
..+|||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccc
Confidence 999999999 667878876545567999999999999999999999999 9999999999999
Q ss_pred --cCCCCCeeecccCccccCC-CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchh
Q 010340 207 --DENGDPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL 283 (512)
Q Consensus 207 --~~~~~~kl~Dfg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~ 283 (512)
+.++.+||+|||+++.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+.
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~ 252 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV-MME 252 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHH
T ss_pred cccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHH
Confidence 5678999999999986544 345678999999999999899999999999999999999998876432111000 000
Q ss_pred hhccc---------------------------------------ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 010340 284 HLMDS---------------------------------------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 324 (512)
Q Consensus 284 ~~~~~---------------------------------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl 324 (512)
..... ..........+..+.+||.+||+.||.+|||+.+++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 00000 000011234466789999999999999999999999
Q ss_pred HHhc
Q 010340 325 STLA 328 (512)
Q Consensus 325 ~~L~ 328 (512)
++-.
T Consensus 333 ~hp~ 336 (355)
T 2eu9_A 333 LHPF 336 (355)
T ss_dssp TSGG
T ss_pred cChh
Confidence 8744
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=331.31 Aligned_cols=251 Identities=19% Similarity=0.223 Sum_probs=182.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+..+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+..+..+++.++||||+++++++.+.+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 100 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRK---TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF 100 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETT---TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hccccccceeeecCCeeEEEEEEec---CCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence 4567788999999999999999987 78899999997654322 123445556788889999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+||||+ ++.+..+... ....+++..++.++.||+.||.|||+. + ++|+||||+|||++.++.+||+|||++.....
T Consensus 101 lv~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 101 IAMELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EEECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999999 5556555532 456799999999999999999999995 8 99999999999999999999999999876543
Q ss_pred C---CccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 226 G---KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
. ....+|+.|+|||++. +..++.++|||||||++|+|++|+.||..................... .....
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~ 255 (318)
T 2dyl_A 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL--PGHMG 255 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC--CSSSC
T ss_pred CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC--CccCC
Confidence 2 2456899999999994 456889999999999999999999886542111111111111000001 11123
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.+..+.+|+.+||+.||.+|||+.+++++-
T Consensus 256 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 256 FSGDFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp CCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 456788999999999999999999998864
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-41 Score=322.15 Aligned_cols=226 Identities=15% Similarity=0.149 Sum_probs=184.1
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---hHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++......+. +.+.+|+.++..++||||+++++++.+.+..++
T Consensus 32 ~y~i~~~lg~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 32 RYRLLIFHGGVPPLQFWQALDTA---LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TEEEEEEEEBSTTCEEEEEEETT---TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cEEEEEEEcccCCeEEEEEEecC---CCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 46788899999999999999986 789999999987654432 578999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
||||++|++|.+++.. + .....+..|+.||+.||.|||+++ |+||||||+|||++.+|.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp EEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc---------
Confidence 9999999999999952 3 355578889999999999999999 9999999999999999999998554
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC------CCCHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG------NFSSEEATV 301 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 301 (512)
|++ .++.++|||||||++|||+||+.||...... ............ ......++.
T Consensus 175 -------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 175 -------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVR-----SGLAPAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp -------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBC-----CCSEECCBCTTSCBCCHHHHCTTSCHH
T ss_pred -------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcc-----hhhHHHHHHhccCCCChhhcccCCCHH
Confidence 333 3788999999999999999999886542110 000000011111 112345667
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+.+|+.+||+.||.+| |+.++++.|+.+...
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 8999999999999999 999999999987643
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=343.70 Aligned_cols=247 Identities=19% Similarity=0.134 Sum_probs=185.9
Q ss_pred Ccccc-cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFI-VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~-i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 147 (512)
...++ .+.||+|+||+||.+... +++.||||++.... .+.+.+|+.++.++ +|||||++++++.+.+..+|
T Consensus 14 ~~~~~~~~~LG~G~~g~V~~~~~~----~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~l 86 (434)
T 2rio_A 14 KNLVVSEKILGYGSSGTVVFQGSF----QGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86 (434)
T ss_dssp SSCEEEEEEEEECSTTCEEEEEES----SSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred hheeeccCeEeeCCCeEEEEEEEE----CCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEE
Confidence 34444 356899999999875443 67889999987542 35688999999886 89999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCC-----CCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC-------------
Q 010340 148 VAEYMPNDTLAKHLFHWENQT-----IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN------------- 209 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~-----l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~------------- 209 (512)
||||+. |+|.+++....... .++..++.++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCc
Confidence 999996 59999997432111 133346789999999999999999 9999999999999754
Q ss_pred CCCeeecccCccccCCC--------CccccCcccCCcccccC-------CCCCCCCcEEehHHHHHHHHh-CCCCCChhh
Q 010340 210 GDPRLSCFGLMKNSRDG--------KSYSTNLAYTPPEYLRN-------GRVTPESVIFSFGTVLLDLLS-GKHIPPSHA 273 (512)
Q Consensus 210 ~~~kl~Dfg~a~~~~~~--------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~ 273 (512)
+.+||+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 47999999999865432 13468999999999965 568999999999999999999 777664321
Q ss_pred HHHHhccchhh-hcc-cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 274 LDMIRGKNILH-LMD-SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 274 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
... ..+.. ... ...........+..+.+||.+||+.||.+|||+.++++|-.
T Consensus 245 ~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~ 298 (434)
T 2rio_A 245 SRE---SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298 (434)
T ss_dssp THH---HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred hhH---HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCc
Confidence 111 01110 000 11111224567788999999999999999999999998743
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-42 Score=357.64 Aligned_cols=252 Identities=18% Similarity=0.175 Sum_probs=197.1
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEee------
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD------ 141 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 141 (512)
+..|.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.++++++||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~---tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQD---TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTT---TTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 3467789999999999999999876 7888999998764321 13568999999999999999999999765
Q ss_pred CCeeEEEEEccCCCCHHhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC---Ceeecc
Q 010340 142 GDERLLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCF 217 (512)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Df 217 (512)
.+..++||||++||+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. +||+||
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEccc
Confidence 677899999999999999997532 236899999999999999999999999 999999999999987665 899999
Q ss_pred cCccccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc------c----hhh
Q 010340 218 GLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK------N----ILH 284 (512)
Q Consensus 218 g~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------~----~~~ 284 (512)
|++...... ....||+.|+|||++.+..++.++|||||||++|+|++|..||........... . ...
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 999875443 345789999999999999999999999999999999999988754311110000 0 000
Q ss_pred hc------c--cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 010340 285 LM------D--SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 324 (512)
Q Consensus 285 ~~------~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl 324 (512)
.. . ...........+..+.+|+.+||..||++|||+.+++
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00 0 0011234456788899999999999999999997743
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=340.19 Aligned_cols=241 Identities=18% Similarity=0.150 Sum_probs=183.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+.+.||+|+||+||..... +++.||||++.... ...+.+|+.+|+.+ +|||||++++++.+....+||||
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~----~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMF----DNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEES----SSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EecCCeeecCcCEEEEEEEEe----CCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 446677899999997643333 67889999997533 34577899999999 89999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-----CCCCeeecccCccccCC
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-----NGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-----~~~~kl~Dfg~a~~~~~ 225 (512)
|+. |+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ...+||+|||+++....
T Consensus 99 ~~~-g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 99 LCA-ATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CCS-EEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CCC-CCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 996 599999974 3334555567789999999999999999 999999999999953 23577999999976543
Q ss_pred C-------CccccCcccCCccccc---CCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccc-c-CC
Q 010340 226 G-------KSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSH-L-EG 292 (512)
Q Consensus 226 ~-------~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 292 (512)
. ....||+.|+|||++. +..++.++|||||||++|||+| |..||......... ...... . ..
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-----~~~~~~~~~~~ 250 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-----ILLGACSLDCL 250 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-----HHTTCCCCTTS
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-----HHhccCCcccc
Confidence 2 2456899999999997 4567889999999999999999 76665332111110 011100 0 11
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
......+..+.+||.+||+.||.+|||+.++++|-
T Consensus 251 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 11234566688999999999999999999999874
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=322.24 Aligned_cols=230 Identities=17% Similarity=0.119 Sum_probs=184.2
Q ss_pred ccccc-ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHH-hcCCCCCccceEEEEee----CCe
Q 010340 71 SDFIV-SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGV-GKLRHKRLANLIGYCCD----GDE 144 (512)
Q Consensus 71 ~~~~i-~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~ 144 (512)
.+.++ +.||+|+||.||++.+.. +++.||||++.. ...+.+|+.++ +.++||||+++++++.. ...
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcC---CCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 45566 568999999999999987 788999999863 35688899998 55599999999999987 677
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCcc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMK 221 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a~ 221 (512)
.++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++. ++.+||+|||++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 899999999999999998755668999999999999999999999999 999999999999997 7889999999986
Q ss_pred ccCCCCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC----HH
Q 010340 222 NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS----SE 297 (512)
Q Consensus 222 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 297 (512)
... +..++.++|||||||++|||+||+.||...............+... ....+ ..
T Consensus 169 ~~~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 228 (299)
T 3m2w_A 169 ETT------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG--QYEFPNPEWSE 228 (299)
T ss_dssp ECT------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTT--CCSSCHHHHTT
T ss_pred ccc------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhc--cccCCchhccc
Confidence 432 3457889999999999999999998875432211111111111100 11122 23
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhcc
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+..+.+|+.+||+.||.+|||+.+++++-.-
T Consensus 229 ~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~ 260 (299)
T 3m2w_A 229 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260 (299)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHhcChhh
Confidence 46778999999999999999999999997553
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=342.56 Aligned_cols=239 Identities=16% Similarity=0.123 Sum_probs=180.0
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCC-CCcc---------c----
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRH-KRLA---------N---- 134 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h-~niv---------~---- 134 (512)
+.+.+.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++..++| +|+. .
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQE---TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred EEEecccccCCCEEEEEEEecC---CCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3345678999999999999987 78899999998443322 5679999999999987 3211 1
Q ss_pred --------eEEEEee-----CCeeEEEEEccCCCCHHhhhh-----hcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccc
Q 010340 135 --------LIGYCCD-----GDERLLVAEYMPNDTLAKHLF-----HWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196 (512)
Q Consensus 135 --------l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH 196 (512)
+..++.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||+++ |+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiH 234 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVH 234 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEC
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccc
Confidence 1111111 22457778776 679999984 223556889999999999999999999999 999
Q ss_pred cccCccceeecCCCCCeeecccCccccCCC-CccccCcccCCcccc----------cCCCCCCCCcEEehHHHHHHHHhC
Q 010340 197 HDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYL----------RNGRVTPESVIFSFGTVLLDLLSG 265 (512)
Q Consensus 197 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~elltg 265 (512)
|||||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 999999999999999999999998765433 34566 999999999 555688899999999999999999
Q ss_pred CCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 266 KHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.||...... .....+ +.. ....++.+.+||.+||+.||++|||+.+++++
T Consensus 314 ~~Pf~~~~~~----~~~~~~----~~~--~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 314 DLPNTDDAAL----GGSEWI----FRS--CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp SCCCCTTGGG----SCSGGG----GSS--CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCcchh----hhHHHH----Hhh--cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 9887543211 111111 111 01234668899999999999999998887654
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=328.85 Aligned_cols=241 Identities=12% Similarity=0.063 Sum_probs=186.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--------ChhHHHHHHHHHhcCC---------CCCc
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------DPKQFADEAWGVGKLR---------HKRL 132 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---------h~ni 132 (512)
..|.+++.||+|+||.||+|++ +++.||||++...... ..+.+.+|+.+|+.++ ||||
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-----DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-----TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred ccchheeeecccCceEEEEEEe-----CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 3566888999999999999987 4688999999865321 2367899999998886 7777
Q ss_pred cceEEEEe------------------------------eCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHH
Q 010340 133 ANLIGYCC------------------------------DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA 182 (512)
Q Consensus 133 v~l~~~~~------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~ 182 (512)
|++.+++. .....+|||||+++|++.+.+. ...+++..++.|+.||+
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLT 171 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHH
Confidence 77777653 2678999999999997777663 35789999999999999
Q ss_pred HHHHHHh-cCCCccccccCccceeecCCC--------------------CCeeecccCccccCCCCccccCcccCCcccc
Q 010340 183 EALDYCS-SEGRPLYHDLNAYRVLFDENG--------------------DPRLSCFGLMKNSRDGKSYSTNLAYTPPEYL 241 (512)
Q Consensus 183 ~~L~~LH-~~~~iiH~Dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~t~~y~aPE~~ 241 (512)
.||.||| +.+ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++
T Consensus 172 ~aL~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~ 249 (336)
T 2vuw_A 172 ASLAVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLF 249 (336)
T ss_dssp HHHHHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGG
T ss_pred HHHHHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhh
Confidence 9999999 898 99999999999999887 8999999999876543 55899999999999
Q ss_pred cCCCCCCCCcEEehHHH-HHHHHhCCCCCChhhHHHHhccchhhh--cccccCCCCCHHHHHHHHHHHHHhhccCCCCCC
Q 010340 242 RNGRVTPESVIFSFGTV-LLDLLSGKHIPPSHALDMIRGKNILHL--MDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318 (512)
Q Consensus 242 ~~~~~~~~~Dv~slG~~-l~elltg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 318 (512)
.+.. +.++||||||++ .+++++|..|+....+.......+... .........+...++.+.+||.+||+.|
T Consensus 250 ~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d----- 323 (336)
T 2vuw_A 250 TGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS----- 323 (336)
T ss_dssp CCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----
T ss_pred cCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----
Confidence 8766 889999998777 778888987754322111111111110 0111111123467888999999999976
Q ss_pred ChHHHH-HH
Q 010340 319 NTKDLV-ST 326 (512)
Q Consensus 319 s~~~vl-~~ 326 (512)
|+.+++ +|
T Consensus 324 sa~e~l~~H 332 (336)
T 2vuw_A 324 SATDLLCQH 332 (336)
T ss_dssp SHHHHHHHC
T ss_pred CHHHHHhcC
Confidence 999999 76
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=298.65 Aligned_cols=181 Identities=13% Similarity=0.055 Sum_probs=131.3
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC----------hhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD----------PKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
.++.|++|.+..++... .|+.||||++.+..... .++|.+|+++|+++ .|+||+++++++++++..
T Consensus 241 ~~~~~~~~~h~~~rr~~---fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~ 317 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYF---FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSG 317 (569)
T ss_dssp C-C--------CCEEEE---ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEE
T ss_pred ccccCCccccccccccc---ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEE
Confidence 45677777777666555 56779999998654321 24699999999999 799999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
|||||||+|++|.++|. ..++++.. +|+.||+.||.|||++| ||||||||+|||++.+|.+||+|||+|+....
T Consensus 318 yLVMEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EEEEECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EEEEecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999999997 45677764 48899999999999999 99999999999999999999999999986544
Q ss_pred C----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCC
Q 010340 226 G----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH 267 (512)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~ 267 (512)
. .+.+||+.|||||++.+ .+..++|+||+|++++++.++..
T Consensus 392 ~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred CCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 3 34578999999999975 56778999999999988876643
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-29 Score=257.99 Aligned_cols=175 Identities=16% Similarity=0.119 Sum_probs=143.3
Q ss_pred ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--------hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 76 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+.||+|+||.||+|.. .++.+++|+........ .+.+.+|+++|++++||||+++..++...+..+|
T Consensus 342 ~~LG~G~fg~Vy~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-----LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ------CCEEEEEEEC-----SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CEEeeCCCEEEEEEEE-----CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 4679999999999954 45678999876543322 1348999999999999999977777777788899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||++|++|.+++.. ++.++.||+.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999999963 5679999999999999999 999999999999998 9999999999877653
Q ss_pred ----------CccccCcccCCcccccC--CCCCCCCcEEehHHHHHHHHhCCCC
Q 010340 227 ----------KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHI 268 (512)
Q Consensus 227 ----------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~~ 268 (512)
....||+.|||||++.. ..|+..+|+||..+-.++.+.++.+
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24578999999999976 5688889999999988888777643
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-25 Score=215.21 Aligned_cols=155 Identities=16% Similarity=0.041 Sum_probs=121.4
Q ss_pred HHHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------------------ChhHHHHHHH
Q 010340 61 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------------------DPKQFADEAW 122 (512)
Q Consensus 61 ~~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~ 122 (512)
.+....+.-..+.+.+.||+|+||.||+|.+ . +++.||||+++..... ....+.+|+.
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~---~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~ 156 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYS-E---KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR 156 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEE-T---TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEe-C---CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHH
Confidence 3344444444555678899999999999999 4 7889999999753321 1345889999
Q ss_pred HHhcCCCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCcc
Q 010340 123 GVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202 (512)
Q Consensus 123 ~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~ 202 (512)
+|++++ | +++.+++.. +..++||||++|++|.+ +.. .....++.||+.||.|||+.+ |+||||||+
T Consensus 157 ~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~ 222 (282)
T 1zar_A 157 ALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQY 222 (282)
T ss_dssp HHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTT
T ss_pred HHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHH
Confidence 999999 4 666665544 55799999999999988 521 124469999999999999999 999999999
Q ss_pred ceeecCCCCCeeecccCccccCCCCccccCcccCCcccccC
Q 010340 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRN 243 (512)
Q Consensus 203 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~~y~aPE~~~~ 243 (512)
|||++ ++.+||+|||+++. +..++|||++.+
T Consensus 223 NILl~-~~~vkl~DFG~a~~---------~~~~~a~e~l~r 253 (282)
T 1zar_A 223 NVLVS-EEGIWIIDFPQSVE---------VGEEGWREILER 253 (282)
T ss_dssp SEEEE-TTEEEECCCTTCEE---------TTSTTHHHHHHH
T ss_pred HEEEE-CCcEEEEECCCCeE---------CCCCCHHHHHHH
Confidence 99999 99999999999864 345789998753
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=156.60 Aligned_cols=110 Identities=15% Similarity=0.258 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
.+.++.++.+|+.++++|+|++|+..|++||+++|. ++.+|+++|.||..+|++++|+.+|+++++++|+++.+|+++|
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg 88 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKA 88 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 356889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
.++..+|++++|+.+|+++++++|++..++.
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~ 119 (126)
T 4gco_A 89 ACLVAMREWSKAQRAYEDALQVDPSNEEARE 119 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCcCCHHHHH
Confidence 9999999999999999999999999987764
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-21 Score=183.81 Aligned_cols=147 Identities=11% Similarity=0.023 Sum_probs=111.1
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceE--EEEEecCccCCCC------------------------hh
Q 010340 62 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRW--IAVKKFTKHAWPD------------------------PK 115 (512)
Q Consensus 62 ~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~--vavK~~~~~~~~~------------------------~~ 115 (512)
+....+.-.-+.+.+.||+|+||.||+|.+.. +|+. ||||+++...... ..
T Consensus 39 l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~---~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 1zth_A 39 LYKLSAKGYITAMGGVISTGKEANVFYADGVF---DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI 115 (258)
T ss_dssp HHHHHHTTSEEEEEEEEEECSSEEEEEEEEEE---TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred HHHHHhCCCchhhCCEEeecceEEEEEEEEcC---CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence 33344443445677889999999999999854 6788 9999976532110 12
Q ss_pred HHHHHHHHHhcCCCCCc--cceEEEEeeCCeeEEEEEccCC-C----CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 010340 116 QFADEAWGVGKLRHKRL--ANLIGYCCDGDERLLVAEYMPN-D----TLAKHLFHWENQTIEWAMRLRVALYIAEALDYC 188 (512)
Q Consensus 116 ~~~~E~~~l~~l~h~ni--v~l~~~~~~~~~~~lv~E~~~~-g----~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~L 188 (512)
.+.+|+.+|..+.|++| +.++++ ...+|||||+.+ | +|.++... .++..+..++.||+.+|.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence 58899999999988764 444443 356899999942 3 67666531 23456778999999999999
Q ss_pred h-cCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 189 S-SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 189 H-~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
| +.+ |+||||||+|||++. .++|+|||++...
T Consensus 187 H~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 888 999999999999998 9999999998754
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.82 E-value=8.3e-20 Score=155.27 Aligned_cols=115 Identities=17% Similarity=0.148 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC------C-----hHHHhhhHHHhhhcCChHHHHHHHHHHH
Q 010340 397 TQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV------S-----PTVYARRSLCHLMCDQPDAALRDAMQAQ 465 (512)
Q Consensus 397 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~------~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al 465 (512)
+.+...+..+..+|+.+++.|+|++|+..|++||+++|.. + ..+|+|+|.++.++|+|++|+.+|++||
T Consensus 5 ~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL 84 (159)
T 2hr2_A 5 LKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKAL 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4456779999999999999999999999999999999881 1 2399999999999999999999999999
Q ss_pred hh-------CCCcHHHH----HHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcCCC
Q 010340 466 CV-------YPDWSTAF----YMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRG 511 (512)
Q Consensus 466 ~~-------~p~~~~~~----~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~~ 511 (512)
++ +|+++++| |++|.++..+|++++|+.+|++|++++|++.....+
T Consensus 85 ~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~ 141 (159)
T 2hr2_A 85 HYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPG 141 (159)
T ss_dssp HHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTT
T ss_pred HhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 99 99999999 999999999999999999999999999998876654
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.1e-18 Score=146.32 Aligned_cols=107 Identities=7% Similarity=-0.080 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
..+++..++.+|..+++.|+|++|+..|+++++++|. ++.+|+++|.+|..+|+|++|+..|+++++++|+++.+|+++
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 3467889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
|.+|..+|++++|+..|+++++++|+..
T Consensus 111 g~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999764
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=138.96 Aligned_cols=104 Identities=15% Similarity=0.153 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc-------HH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW-------ST 473 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~ 473 (512)
+.+.+++.+|+.++++|+|++|+..|++||+++|. +..+|+++|.+|+.+|+|++|+.+|+++++++|++ ..
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 45888999999999999999999999999999999 99999999999999999999999999999999876 46
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 474 AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 474 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+|+++|.++..+|++++|+.+|+++|+++|+.
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 89999999999999999999999999987753
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-17 Score=136.69 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=102.5
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..++.+|..+++.|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhch------hhhhhcC
Q 010340 481 ALAKLDMHKDAADMLKEAASLE------EKRQRSG 509 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~------p~~~~~~ 509 (512)
++..+|++++|+..|+++++++ |++..++
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~ 115 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREID 115 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHH
Confidence 9999999999999999999999 6665443
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.4e-19 Score=175.48 Aligned_cols=146 Identities=11% Similarity=0.024 Sum_probs=102.5
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--------------ChhH--------HHH
Q 010340 62 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------------DPKQ--------FAD 119 (512)
Q Consensus 62 ~~~~~~~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------------~~~~--------~~~ 119 (512)
|....+.=.-|.+.+.||.|+||.||+|... +|+.||||+++..... .... ..+
T Consensus 87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~----~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~k 162 (397)
T 4gyi_A 87 LHTHAARKDVYSVGSRIGVGKESDIMIVADE----KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIK 162 (397)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEECT----TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEecCEeeeCCceEEEEEECC----CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 3444444344778899999999999999986 6788999998643110 0011 234
Q ss_pred HHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 010340 120 EAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199 (512)
Q Consensus 120 E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dl 199 (512)
|...|.++.+.++.-..-+... ..+|||||++|++|.++.. . .....++.||+.+|.|||+.| ||||||
T Consensus 163 E~~nL~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~g-IVHrDL 231 (397)
T 4gyi_A 163 EFAFMKALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKHG-LIHGDF 231 (397)
T ss_dssp HHHHHHHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCC
T ss_pred HHHHHHHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHCC-CcCCCC
Confidence 6666666644443222112111 2479999999988876542 1 124568899999999999999 999999
Q ss_pred CccceeecCCCC----------CeeecccCccc
Q 010340 200 NAYRVLFDENGD----------PRLSCFGLMKN 222 (512)
Q Consensus 200 kp~Nill~~~~~----------~kl~Dfg~a~~ 222 (512)
||.|||++.++. +.|+||+.+..
T Consensus 232 Kp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 232 NEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp STTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 999999987763 78999997654
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=145.06 Aligned_cols=107 Identities=19% Similarity=0.208 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc------------------CCCCChHHHhhhHHHhhhcCChHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV------------------GTMVSPTVYARRSLCHLMCDQPDAALRD 460 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~------------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 460 (512)
.++.+..++.+|+.+++.|+|++|+..|++||++ +|. ...+|+++|.||+.+|+|++|+.+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHH
Confidence 4467889999999999999999999999999998 666 778999999999999999999999
Q ss_pred HHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 461 AMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 461 ~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
|+++|+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 86 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 86 SSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 9999999999999999999999999999999999999999999987
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.9e-17 Score=140.55 Aligned_cols=108 Identities=21% Similarity=0.291 Sum_probs=104.0
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..++.+|..+++.|+|++|+..|+++++++|. +..+|+++|.+|+.+|+|++|+.+|+++++++|+++.+|+++|.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 46788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++..+|++++|+.+|+++++++|++..+|
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 99999999999999999999999987644
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-16 Score=136.40 Aligned_cols=108 Identities=10% Similarity=0.042 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
..++..++.+|..++..|+|++|+..|+++++.+|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+++++|
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 456888999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
.++..+|++++|+..|+++++++|++...
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 99999999999999999999999986543
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-17 Score=140.16 Aligned_cols=108 Identities=17% Similarity=0.130 Sum_probs=102.0
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
+.+..++..|..+++.|+|++|+..|+++|+++|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 107 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAE 107 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45677889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHH-HHHHHhchhhhhhcC
Q 010340 481 ALAKLDMHKDAADM-LKEAASLEEKRQRSG 509 (512)
Q Consensus 481 ~~~~~~~~~~A~~~-~~~al~l~p~~~~~~ 509 (512)
++..+|++++|... +++|++++|++..++
T Consensus 108 ~~~~~~~~~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 108 LLCKNDVTDGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHCSSSSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHhCcCCHHHH
Confidence 99999999988776 599999999988764
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-16 Score=133.81 Aligned_cols=108 Identities=9% Similarity=0.043 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
..++..++.+|..+++.|+|++|+..|++++..+|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+++++|
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 346778999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
.++..+|++++|+..|+++++++|++...
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 99999999999999999999999987653
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-16 Score=129.98 Aligned_cols=102 Identities=10% Similarity=0.037 Sum_probs=92.9
Q ss_pred HHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 010340 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 484 (512)
Q Consensus 405 ~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 484 (512)
.++.+|..+++.|++++|+..|+++++.+|. +..+|+++|.++..+|++++|+..|+++++++|+++.+++.+|.++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHhchhhhhh
Q 010340 485 LDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 485 ~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
+|++++|+..|+++++++|++..
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHC-------
T ss_pred cCCHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999998754
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.3e-15 Score=125.54 Aligned_cols=103 Identities=23% Similarity=0.391 Sum_probs=100.2
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+...|..++..|+|++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 4778999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhh
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+..+|++++|+..|+++++++|++
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHHHChhH
Confidence 999999999999999999999983
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.62 E-value=9.9e-16 Score=139.29 Aligned_cols=108 Identities=17% Similarity=0.050 Sum_probs=102.0
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhh----------------hHHHhhhcCChHHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYAR----------------RSLCHLMCDQPDAALRDAMQAQ 465 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~al 465 (512)
.++.+..+|..++..|+|++|+..|+++++.+|. ++.+|+. +|.+|..+|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4678889999999999999999999999999998 9999999 9999999999999999999999
Q ss_pred hhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 466 CVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 466 ~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
+++|+++.+++.+|.++..+|++++|+..|+++++++|++..+|.
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~ 126 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANI 126 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 999999999999999999999999999999999999999887653
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-16 Score=132.90 Aligned_cols=96 Identities=13% Similarity=0.037 Sum_probs=89.7
Q ss_pred HhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCCh----------HHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 414 FREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQP----------DAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 414 ~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
-+.+.|++|+..|+++++++|. ++++|+++|.++..++++ ++|+..|++||+++|++.++|+++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3668899999999999999999 999999999999999876 59999999999999999999999999999
Q ss_pred HcC-----------ChHHHHHHHHHHHhchhhhhhcCC
Q 010340 484 KLD-----------MHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 484 ~~~-----------~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
.+| ++++|+.+|++|++++|++..+++
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~ 129 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 129 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 985 899999999999999999877654
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=4.4e-15 Score=133.68 Aligned_cols=115 Identities=17% Similarity=0.188 Sum_probs=107.0
Q ss_pred hhHHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh----------------HHHhhhHHHhhhcCChHHH
Q 010340 394 QEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP----------------TVYARRSLCHLMCDQPDAA 457 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~----------------~~~~~~~~~~~~~~~~~~A 457 (512)
.......+.+..+..+|..++..|+|++|+..|++++++.|. ++ .+|+++|.+|..+|+|++|
T Consensus 29 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 107 (198)
T 2fbn_A 29 YTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKA 107 (198)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 334456677899999999999999999999999999999888 65 8999999999999999999
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 458 LRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 458 ~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+.+++++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++
T Consensus 108 ~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 159 (198)
T 2fbn_A 108 IDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 159 (198)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 9999999999999999999999999999999999999999999999987654
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.61 E-value=8.8e-16 Score=152.65 Aligned_cols=106 Identities=7% Similarity=0.019 Sum_probs=67.8
Q ss_pred HHHHHHHHhHHHhhhc-HHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKE-FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~-~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+..++.+|.++...|+ +++|+..|++||+++|. +..+|+++|.++..+|++++|+.+|++||+++|+++.+|+++|.+
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~ 209 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWV 209 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHH
Confidence 5555666666666664 66666666666666666 666666666666666666666666666666666666666666666
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+..+|++++|+.+|+++|+++|.+..+|
T Consensus 210 ~~~~g~~~eAl~~~~~al~l~P~~~~a~ 237 (382)
T 2h6f_A 210 IQEFKLWDNELQYVDQLLKEDVRNNSVW 237 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHcCChHHHHHHHHHHHHhCCCCHHHH
Confidence 6666666666666666666666665555
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-15 Score=160.52 Aligned_cols=120 Identities=12% Similarity=0.033 Sum_probs=99.1
Q ss_pred cccchhhHHH-HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhh
Q 010340 389 NELSFQEWTQ-QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 467 (512)
Q Consensus 389 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 467 (512)
+...++..+. ..+.+..+..+|.++.++|++++|+..|++||+++|+ +..+|+++|.+|..+|++++|++.|++|+++
T Consensus 28 Ai~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l 106 (723)
T 4gyw_A 28 AVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQI 106 (723)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3344444333 2244788888888888889999999999999988888 8888888999998889999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 468 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 468 ~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|+++.+|+++|.+|..+|++++|+..|++|++++|++..++
T Consensus 107 ~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~ 148 (723)
T 4gyw_A 107 NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAY 148 (723)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 998888999999999999999999999999998888877665
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=6.6e-15 Score=119.51 Aligned_cols=107 Identities=21% Similarity=0.353 Sum_probs=103.0
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..++..|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 5778999999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+..+|++++|+..|+++++++|++..++
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 109 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNPQLK 109 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999987665
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=6e-16 Score=132.91 Aligned_cols=101 Identities=7% Similarity=-0.075 Sum_probs=93.6
Q ss_pred HHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCCh
Q 010340 409 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMH 488 (512)
Q Consensus 409 ~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~ 488 (512)
+|..+..+|++++|+..|++++..+|. ++.+++++|.+|+++|+|++|++.|+++++++|+++.+|+.+|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 578888999999999999999999888 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhchhhhhhcCC
Q 010340 489 KDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 489 ~~A~~~~~~al~l~p~~~~~~~ 510 (512)
++|+..|+++++++|++..++.
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~ 103 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVL 103 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999887653
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=9.1e-15 Score=121.63 Aligned_cols=107 Identities=19% Similarity=0.331 Sum_probs=102.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.+..++.+|..++..|+|++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 93 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAA 93 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 3667899999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+..+|++++|+..|+++++++|.+..++
T Consensus 94 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 121 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKALDLDSSCKEAA 121 (133)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCGGGTHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhCCCchHHH
Confidence 9999999999999999999999987654
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.8e-15 Score=144.66 Aligned_cols=112 Identities=15% Similarity=0.187 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---------------hHHHhhhHHHhhhcCChHHHHHHH
Q 010340 397 TQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---------------PTVYARRSLCHLMCDQPDAALRDA 461 (512)
Q Consensus 397 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~ 461 (512)
......+..++.+|..+++.|+|++|+..|++|++++|. + ..+|+++|.||+++|+|++|+.+|
T Consensus 141 ~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 219 (336)
T 1p5q_A 141 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 219 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 345677999999999999999999999999999999998 6 689999999999999999999999
Q ss_pred HHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 462 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 462 ~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..++
T Consensus 220 ~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 220 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 999999999999999999999999999999999999999999987665
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.4e-14 Score=128.49 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=103.1
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+...|..+...++++.|+..+.++++++|. +..++..+|.+|..+|++++|++.|+++++++|+++.+|+++|.+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 567788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcCCC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSGRG 511 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~~~ 511 (512)
..+|++++|+.+|++|++++|++...+.+
T Consensus 152 ~~~g~~~~A~~~~~~al~~~p~~a~~~la 180 (184)
T 3vtx_A 152 EGKGLRDEAVKYFKKALEKEEKKAKYELA 180 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHTTHHHHHHCSC
T ss_pred HHCCCHHHHHHHHHHHHhCCccCHHHHHH
Confidence 99999999999999999999999876544
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.59 E-value=6.5e-15 Score=150.53 Aligned_cols=112 Identities=13% Similarity=0.202 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---------------hHHHhhhHHHhhhcCChHHHHHHH
Q 010340 397 TQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---------------PTVYARRSLCHLMCDQPDAALRDA 461 (512)
Q Consensus 397 ~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~ 461 (512)
......+..++.+|..+++.|+|++|+..|++||+++|. + ..+|+|+|.||+++|+|++|+.+|
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 340 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 340 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 345677999999999999999999999999999999998 6 689999999999999999999999
Q ss_pred HHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 462 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 462 ~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++|++++|+++.+|+++|.+|+.+|+|++|+.+|++|++++|++..++
T Consensus 341 ~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 341 DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHH
T ss_pred HHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987665
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.8e-15 Score=135.11 Aligned_cols=108 Identities=12% Similarity=0.152 Sum_probs=103.2
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
+++..++.+|..+++.|++++|+..|+++++.+|. ++.+++++|.++..+|++++|+..|+++++++|+++.+++.+|.
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHc-----------CChHHHHHHHHHHHhchhhhhhcC
Q 010340 481 ALAKL-----------DMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 481 ~~~~~-----------~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++..+ |++++|+..|+++++++|++..+|
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 121 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLH 121 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHH
Confidence 99999 999999999999999999987665
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=122.74 Aligned_cols=107 Identities=25% Similarity=0.299 Sum_probs=101.6
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
++..++..|..++..|+|++|+..|+++++.+|. + ..+|+++|.+|..+|++++|+..++++++++|+++.+++.+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 3567889999999999999999999999999998 6 89999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
|.++..+|++++|+..|+++++++|++..++
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 9999999999999999999999999987655
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5e-15 Score=158.66 Aligned_cols=108 Identities=11% Similarity=0.074 Sum_probs=96.2
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
+++++|+.+|.++.++|+|++|+..|++||+++|+ +..+|+++|.+|.++|++++|+..|++|++++|+++.+|+++|.
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~ 85 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56788888999999999999999999999999888 88899999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|..+|++++|++.|++|++++|++..++
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999887665
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-14 Score=123.30 Aligned_cols=110 Identities=20% Similarity=0.301 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
..+.+..+..+|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 4467889999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
|.++..+|++++|+..|+++++++|++..++
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999877654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.2e-15 Score=144.55 Aligned_cols=115 Identities=15% Similarity=0.145 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh-----------------HHHhhhHHHhhhcCChHHHH
Q 010340 396 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP-----------------TVYARRSLCHLMCDQPDAAL 458 (512)
Q Consensus 396 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~A~ 458 (512)
.....+.+..++.+|..+++.|+|++|+..|++|+++.|. +. .+|+++|.||+++|+|++|+
T Consensus 172 ~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~ 250 (338)
T 2if4_A 172 VEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAI 250 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3456677899999999999999999999999999999887 55 48999999999999999999
Q ss_pred HHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcCCC
Q 010340 459 RDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRG 511 (512)
Q Consensus 459 ~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~~ 511 (512)
.+|+++++++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..
T Consensus 251 ~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~ 303 (338)
T 2if4_A 251 GHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRE 303 (338)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999887653
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.3e-14 Score=136.74 Aligned_cols=106 Identities=23% Similarity=0.380 Sum_probs=101.7
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..++.+|..+++.|+|++|+..|++|++.+|. +..+|+++|.+|..+|++++|+.+++++++++|++..+++++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+..+|++++|+..|+++++++|++...
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~~ 108 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRLN 108 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchhh
Confidence 999999999999999999999987543
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=5.6e-15 Score=146.88 Aligned_cols=110 Identities=10% Similarity=-0.004 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCC-hHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ-PDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
...+..+..+|.++.+.|++++|+..|+++|+++|. +..+|+++|.++..+|+ +++|+.+|+++|+++|+++.+|+++
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~ 172 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHR 172 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 456777888888888888999999999999998888 88889999999988886 9999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
|.++..+|++++|+.+|++||+++|++..+|.
T Consensus 173 g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~ 204 (382)
T 2h6f_A 173 RVLVEWLRDPSQELEFIADILNQDAKNYHAWQ 204 (382)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCccCHHHHH
Confidence 99999999999999999999999988887764
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-14 Score=143.43 Aligned_cols=113 Identities=15% Similarity=0.231 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHh----------------cCCCCChHHHhhhHHHhhhcCChHHHHH
Q 010340 396 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFID----------------VGTMVSPTVYARRSLCHLMCDQPDAALR 459 (512)
Q Consensus 396 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~----------------~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 459 (512)
.....+.+..++.+|..+++.|+|++|+..|++|++ .+|. ...+|+++|.||+++|+|++|+.
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHH
Confidence 344556788899999999999999999999999998 6676 78999999999999999999999
Q ss_pred HHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 460 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 460 ~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|++|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~ 344 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 344 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999887654
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=5e-14 Score=116.45 Aligned_cols=110 Identities=20% Similarity=0.352 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
...++..+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 4456889999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
|.++..+|++++|+..|+++++++|++..++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 9999999999999999999999999877654
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.55 E-value=2e-14 Score=119.24 Aligned_cols=104 Identities=10% Similarity=0.046 Sum_probs=98.0
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh---HHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc---HHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP---TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---STAFYM 477 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~ 477 (512)
..++.+|..++..|+|++|+..|+++++..|. +. .+++++|.+|..+|++++|+..|+++++.+|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 34678999999999999999999999999998 66 799999999999999999999999999999999 899999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 478 QAVALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 478 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+|.++..+|++++|+..|+++++++|++..+
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 9999999999999999999999999987654
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.3e-14 Score=128.86 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=100.2
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCC-CCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGT-MVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
++..++.+|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..|+++++++|+++.+|+.+|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 357899999999999999999999999999998 6 88999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
++..+|++++|+..|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999976
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.2e-14 Score=114.29 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=97.7
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCC--cHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD--WSTAFYMQAV 480 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~~g~ 480 (512)
+..+..+|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+ +..+++.+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 345677899999999999999999999999998 9999999999999999999999999999999999 9999999999
Q ss_pred HHHHc-CChHHHHHHHHHHHhchhhhh
Q 010340 481 ALAKL-DMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 481 ~~~~~-~~~~~A~~~~~~al~l~p~~~ 506 (512)
++..+ |++++|+.+|+++++.+|.+.
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999998754
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.4e-14 Score=126.43 Aligned_cols=97 Identities=10% Similarity=-0.017 Sum_probs=90.7
Q ss_pred HHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHc---
Q 010340 409 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKL--- 485 (512)
Q Consensus 409 ~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~--- 485 (512)
+|.++++.|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999988877543
Q ss_pred --------------------------------CChHHHHHHHHHHHhchhhhh
Q 010340 486 --------------------------------DMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 486 --------------------------------~~~~~A~~~~~~al~l~p~~~ 506 (512)
|+|++|+.+|++|++++|+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 468999999999999999753
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.8e-14 Score=127.97 Aligned_cols=107 Identities=13% Similarity=-0.016 Sum_probs=101.4
Q ss_pred HHHHHHHHHHhHHHhh-----------hcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCC
Q 010340 401 RDMLEARKRGDVAFRE-----------KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYP 469 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~-----------~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 469 (512)
.++..+..+|.++... |++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~- 148 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE- 148 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-
Confidence 3477888999999999 9999999999999999999 99999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 470 DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 470 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+++.+++++|.++..+|++++|+..|+++++++|++..++
T Consensus 149 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 188 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLR 188 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999999999999999999999999987654
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.3e-14 Score=118.72 Aligned_cols=93 Identities=13% Similarity=0.045 Sum_probs=84.1
Q ss_pred hhhcHHHHHHHHHHHHhc---CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHH
Q 010340 415 REKEFKTAVDCYSQFIDV---GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDA 491 (512)
Q Consensus 415 ~~~~~~~Ai~~~~~al~~---~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A 491 (512)
..|++++|+..|++++++ +|. +..+++++|.+|..+|+|++|+..|+++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 577 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhhhhhc
Q 010340 492 ADMLKEAASLEEKRQRS 508 (512)
Q Consensus 492 ~~~~~~al~l~p~~~~~ 508 (512)
+..|+++++++|++...
T Consensus 81 ~~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 81 VELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHhCCCcHHH
Confidence 99999999999987543
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-13 Score=121.92 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=67.3
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+..+|.++++.|++++|+..+.+++...|. ...++.++|.++...++++.|+..+.++++++|++..+++.+|.++
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~ 117 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVY 117 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 444555555555555555555555555555554 5555555555555555555566666666677777777777777777
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
..+|++++|+..|+++++++|.+..+|
T Consensus 118 ~~~g~~~~A~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 118 DSMGEHDKAIEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhCCchhHHHHHHHHHHhcchhhhHH
Confidence 777777777777777777777766554
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.9e-13 Score=113.03 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=98.3
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc-------HH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW-------ST 473 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~ 473 (512)
+.+..++..|..++..|+|++|+..|+++++.+|. +..+++++|.+|..+|++++|+..+++++++.|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 35678999999999999999999999999999998 99999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 474 AFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 474 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
+++++|.++..+|++++|+..|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999884
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.7e-13 Score=125.97 Aligned_cols=108 Identities=15% Similarity=0.130 Sum_probs=101.9
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH-------H
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS-------T 473 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 473 (512)
.+...++.+|.+++..|+|++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 34667788999999999999999999999999999 999999999999999999999999999999999998 7
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhchhh--hhhcC
Q 010340 474 AFYMQAVALAKLDMHKDAADMLKEAASLEEK--RQRSG 509 (512)
Q Consensus 474 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~--~~~~~ 509 (512)
+|+.+|.++..+|++++|+..|+++++++|+ +..++
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 7999999999999999999999999999999 76654
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.48 E-value=4.3e-13 Score=109.69 Aligned_cols=106 Identities=13% Similarity=0.184 Sum_probs=101.1
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+...|..++..|++++|+..|+++++..|. +..+++++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 667889999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
..+|++++|+..|+++++++|++..++
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNAEAK 114 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 999999999999999999999876654
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=130.49 Aligned_cols=137 Identities=11% Similarity=-0.036 Sum_probs=108.7
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 150 (512)
+.+...+|.|+.+.||++.. .+..+++|+...........+.+|+.+++.+ .+.++.++++++.+.+..++|||
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~-----~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp SEEEECCSCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred ceeEeeccCCCCCeEEEEEC-----CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 44666678888899999874 3456999998764333345799999999998 47889999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS---------------------------------------- 190 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~---------------------------------------- 190 (512)
|++|.+|.+.+. +......++.+++++|..||+
T Consensus 91 ~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 91 EADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp CCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred ecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 999999987642 112234678899999999998
Q ss_pred -------------------CCCccccccCccceeecCCCCCeeecccCcc
Q 010340 191 -------------------EGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 191 -------------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.. ++|+|++|.|||++.++.+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 22 7999999999999876566799998753
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.45 E-value=6.7e-13 Score=120.34 Aligned_cols=103 Identities=18% Similarity=0.162 Sum_probs=97.7
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH----------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS---------- 472 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---------- 472 (512)
+..+..+|.+++..|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 568899999999999999999999999999998 999999999999999999999999999999888766
Q ss_pred ------HHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 473 ------TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 473 ------~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
.+++++|.++..+|++++|+..|+++++++|++.
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999764
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.45 E-value=4e-13 Score=118.24 Aligned_cols=106 Identities=12% Similarity=0.103 Sum_probs=101.1
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHH-hhhcCCh--HHHHHHHHHHHhhCCCcHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLC-HLMCDQP--DAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
.++..+..+|..++..|+|++|+..|+++++++|. +..+++++|.+ +...|++ ++|+..++++++++|+++.+++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHH
Confidence 34778999999999999999999999999999999 99999999999 8899999 99999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 478 QAVALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 478 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
+|.++..+|++++|+..|+++++++|++..
T Consensus 121 la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 150 (177)
T 2e2e_A 121 LASDAFMQANYAQAIELWQKVMDLNSPRIN 150 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCcc
Confidence 999999999999999999999999998754
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.44 E-value=4.1e-14 Score=121.27 Aligned_cols=94 Identities=7% Similarity=-0.204 Sum_probs=86.3
Q ss_pred hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHH
Q 010340 416 EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADML 495 (512)
Q Consensus 416 ~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~ 495 (512)
.+++-.+-..|+++++++|. +..+++++|.+++.+|+|++|+..|+++++++|+++.+|+++|.++..+|+|++|+..|
T Consensus 15 l~~~~~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~ 93 (151)
T 3gyz_A 15 VIDAINSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLY 93 (151)
T ss_dssp HHHHHHTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHH
Confidence 34444455678999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchhhhhhcCC
Q 010340 496 KEAASLEEKRQRSGR 510 (512)
Q Consensus 496 ~~al~l~p~~~~~~~ 510 (512)
++|++++|++..+|.
T Consensus 94 ~~al~l~P~~~~~~~ 108 (151)
T 3gyz_A 94 AVAFALGKNDYTPVF 108 (151)
T ss_dssp HHHHHHSSSCCHHHH
T ss_pred HHHHhhCCCCcHHHH
Confidence 999999999887764
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.44 E-value=7.4e-14 Score=143.36 Aligned_cols=108 Identities=20% Similarity=0.298 Sum_probs=102.7
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
+.+..++.+|..++++|+|++|+..|++|++++|. +..+|+++|.+|.++|++++|++++++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45677888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|..+|++++|+..|++|++++|++..++
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999887654
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.43 E-value=5.7e-14 Score=113.04 Aligned_cols=95 Identities=17% Similarity=0.277 Sum_probs=90.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc------HHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW------STAF 475 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~ 475 (512)
++..+..+|..++..|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 5678999999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHcCChHHHHHHHHH
Q 010340 476 YMQAVALAKLDMHKDAADMLKE 497 (512)
Q Consensus 476 ~~~g~~~~~~~~~~~A~~~~~~ 497 (512)
+++|.++..+|++++|+..|++
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHhHhhhHhHHHH
Confidence 9999999999999998877764
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-12 Score=119.69 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
..+..+...|..++..|+|++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++++|+++.+|+.+|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 215 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 215 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhch------hhhhhcC
Q 010340 481 ALAKLDMHKDAADMLKEAASLE------EKRQRSG 509 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~------p~~~~~~ 509 (512)
++..+|++++|+..|+++++++ |++..++
T Consensus 216 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~ 250 (258)
T 3uq3_A 216 AQIAVKEYASALETLDAARTKDAEVNNGSSAREID 250 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHH
Confidence 9999999999999999999999 7665543
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=2.9e-12 Score=120.69 Aligned_cols=106 Identities=17% Similarity=0.026 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
...+..+..+|..++..|++++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+++.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 356788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
.++..+|++++|+..|+++++++|++.
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999875
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.39 E-value=2.3e-12 Score=116.82 Aligned_cols=102 Identities=15% Similarity=0.117 Sum_probs=95.7
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..++.+|..++..|+|++|+..|++++ ++ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 456778999999999999999999999996 33 68899999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
++..+|++++|+..|++++++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999998765
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=122.55 Aligned_cols=106 Identities=11% Similarity=0.041 Sum_probs=99.5
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc---HHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---STAF 475 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~ 475 (512)
++..++.+|..+++.|+|++|+..|+++++..|. + ..+++++|.+|+.+|+|++|+..|+++++++|++ +.++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 92 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAE 92 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHH
Confidence 4778999999999999999999999999999998 7 8899999999999999999999999999998854 7899
Q ss_pred HHHHHHHHH--------cCChHHHHHHHHHHHhchhhhhhc
Q 010340 476 YMQAVALAK--------LDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 476 ~~~g~~~~~--------~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+.+|.+++. +|++++|+..|+++++++|++..+
T Consensus 93 ~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 133 (261)
T 3qky_A 93 YERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELV 133 (261)
T ss_dssp HHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTH
T ss_pred HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhH
Confidence 999999999 999999999999999999987654
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-12 Score=106.64 Aligned_cols=86 Identities=16% Similarity=0.084 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 010340 420 KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAA 499 (512)
Q Consensus 420 ~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 499 (512)
++|+..|+++++.+|. +..+++++|.+|..+|++++|+..|+++++++|++..+|+.+|.++..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhh
Q 010340 500 SLEEKRQ 506 (512)
Q Consensus 500 ~l~p~~~ 506 (512)
+++|++.
T Consensus 81 ~~~~~~~ 87 (115)
T 2kat_A 81 AAAQSRG 87 (115)
T ss_dssp HHHHHHT
T ss_pred Hhccccc
Confidence 9999754
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.37 E-value=5.1e-13 Score=143.41 Aligned_cols=107 Identities=9% Similarity=-0.025 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..++.+|.+++..|+|++|+..|++|++++|. +..+|+++|.+|..+|++++ +..|++|++++|+++.+|+++|.
T Consensus 465 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~ 542 (681)
T 2pzi_A 465 WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLAR 542 (681)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHH
Confidence 34677888888888888888888888888888888 88888888888888888888 88888888889988889999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++..+|++++|+.+|++|++++|++..++
T Consensus 543 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 543 ARSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 99999999999999999999888877665
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.1e-13 Score=109.90 Aligned_cols=82 Identities=15% Similarity=0.038 Sum_probs=75.9
Q ss_pred HHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 428 QFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 428 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
++..++|. .+.+|.++|.+|++.|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|++|++++|++..
T Consensus 4 r~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 4 RLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp ---CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 45568888 99999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cCC
Q 010340 508 SGR 510 (512)
Q Consensus 508 ~~~ 510 (512)
+|.
T Consensus 83 a~~ 85 (126)
T 4gco_A 83 GYI 85 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.6e-12 Score=126.83 Aligned_cols=107 Identities=14% Similarity=0.090 Sum_probs=101.1
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..++.+|..+++.|+|++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+|
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSY 143 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 445788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
..+|++++|+..|+++++++|++..++.
T Consensus 144 ~~~g~~~~A~~~~~~al~~~p~~~~~~~ 171 (365)
T 4eqf_A 144 TNTSHQQDACEALKNWIKQNPKYKYLVK 171 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHHHCC--
T ss_pred HccccHHHHHHHHHHHHHhCccchHHHh
Confidence 9999999999999999999999877664
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.7e-12 Score=117.87 Aligned_cols=108 Identities=8% Similarity=-0.009 Sum_probs=97.9
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC--hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHH---HHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS--PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWST---AFY 476 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~ 476 (512)
.+..++.+|..+++.|+|++|+..|+++++..|... ..+++++|.+|+.+|+|++|+..|+++++++|+++. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 356789999999999999999999999999988722 478999999999999999999999999999999875 899
Q ss_pred HHHHHHHH------------------cCChHHHHHHHHHHHhchhhhhhcC
Q 010340 477 MQAVALAK------------------LDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 477 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.+|.++.. +|++++|+..|+++++.+|++..++
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 99999987 5799999999999999999987653
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.34 E-value=6.6e-12 Score=103.84 Aligned_cols=102 Identities=15% Similarity=0.196 Sum_probs=94.2
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+...+...|..+...|++++|+..|+++++..|. ...+++++|.++...|++++|+..++++++..|++..+++.+|.+
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4667888899999999999999999999999888 888999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhh
Q 010340 482 LAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
+...|++++|+..|+++++++|+
T Consensus 113 ~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 113 YYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHccHHHHHHHHHHHHccCCC
Confidence 99999999999999999998886
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-11 Score=101.77 Aligned_cols=104 Identities=14% Similarity=0.196 Sum_probs=98.5
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
..+...|..++..|++++|+..|+++++.+|. +..+++++|.++...|++++|+..+++++++.|.+..+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 45778899999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHhchhhhhhc
Q 010340 484 KLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 484 ~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
..|++++|+..|+++++++|.+..+
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~ 105 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEA 105 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHH
Confidence 9999999999999999999976554
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=6e-12 Score=116.10 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=65.6
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+..+|..++..|++++|+..|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|++..+++.+|.++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 135 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVL 135 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 455556666666666666666666666666665 5666666666666666666666666666666666666666666666
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhh
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
..+|++++|+..|+++++++|++..
T Consensus 136 ~~~~~~~~A~~~~~~~~~~~~~~~~ 160 (243)
T 2q7f_A 136 VKLEQPKLALPYLQRAVELNENDTE 160 (243)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHhccHHHHHHHHHHHHHhCCccHH
Confidence 6666666666666666666655443
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.5e-12 Score=132.06 Aligned_cols=106 Identities=12% Similarity=0.011 Sum_probs=101.2
Q ss_pred HHHHHHHHhHHHhh---------hcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhc--------CChHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFRE---------KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC--------DQPDAALRDAMQAQ 465 (512)
Q Consensus 403 ~~~~~~~g~~~~~~---------~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~al 465 (512)
+..+..+|.++... |+|++|+..|++|++++|. +..+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 56788899999999 9999999999999999999 999999999999999 99999999999999
Q ss_pred hhCC---CcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 466 CVYP---DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 466 ~~~p---~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+++| +++.+|+++|.+|..+|++++|+..|++|++++|++..+|
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~ 295 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQ 295 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999 9999999999999999999999999999999999987665
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.3e-11 Score=108.31 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=101.0
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+...+...|..++..|++++|+..|+++++..|. +..+++.+|.++..+|++++|+..++++++..|+++.+++.+|.+
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 153 (186)
T 3as5_A 75 NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFS 153 (186)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 3667888999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+..+|++++|+..|+++++++|++...
T Consensus 154 ~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 154 YEQMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCchhh
Confidence 999999999999999999999987654
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.33 E-value=7.2e-12 Score=122.42 Aligned_cols=107 Identities=18% Similarity=0.200 Sum_probs=102.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+++.+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++..+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 5678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchh---hhhhcC
Q 010340 482 LAKLDMHKDAADMLKEAASLEE---KRQRSG 509 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p---~~~~~~ 509 (512)
+..+|++++|+..|+++++++| ++..++
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 111 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKEAE 111 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHHHH
Confidence 9999999999999999999999 766554
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=5.9e-12 Score=132.41 Aligned_cols=104 Identities=13% Similarity=0.011 Sum_probs=63.9
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+..+|..++..|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+++++|.++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 101 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHAL 101 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 455555666666666666666666666666665 5666666666666666666666666666666666666666666666
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhh
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
..+|++++|+..|+++++++|++..
T Consensus 102 ~~~g~~~~A~~~~~~al~~~p~~~~ 126 (568)
T 2vsy_A 102 EDAGQAEAAAAAYTRAHQLLPEEPY 126 (568)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 6666666666666666666665443
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.4e-12 Score=101.38 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=86.8
Q ss_pred HHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChH-HHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 010340 406 ARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPT-VYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 484 (512)
Q Consensus 406 ~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 484 (512)
.+.+|..+++.|+|++|+..|+++++.+|. +.. +|+++|.+|..+|++++|+..|+++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 357899999999999999999999999999 888 99999999999999999999999999999999999865
Q ss_pred cCChHHHHHHHHHHHhchhhhhh
Q 010340 485 LDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 485 ~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
+.+.+|+..|++++.++|.+..
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSS
T ss_pred -HHHHHHHHHHHHHhccCccccc
Confidence 7789999999999999998754
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=8.4e-12 Score=123.07 Aligned_cols=103 Identities=18% Similarity=0.211 Sum_probs=99.5
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+..+|..+...|++++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+++.+|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 4667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhh
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+..+|++++|+..|+++++++|++
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999984
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.6e-12 Score=131.93 Aligned_cols=107 Identities=11% Similarity=0.001 Sum_probs=102.6
Q ss_pred HHHHHHHHHhHHHhhhcH-HHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEF-KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~-~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
++..++.+|..++..|+| ++|+..|++|++++|. +..+|+++|.+|..+|++++|+..|+++++++|+ ..+++++|.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~ 178 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSM 178 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHH
Confidence 477899999999999999 9999999999999999 9999999999999999999999999999999999 799999999
Q ss_pred HHHHc---------CChHHHHHHHHHHHhchhhhhhcCC
Q 010340 481 ALAKL---------DMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 481 ~~~~~---------~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
++..+ |++++|+..|++|++++|++..+|.
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 217 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWY 217 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999 9999999999999999999887663
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.31 E-value=8.8e-12 Score=123.13 Aligned_cols=159 Identities=13% Similarity=0.121 Sum_probs=114.6
Q ss_pred cccCHHHHHHHhc----CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecC--ccCC-CChhHHHHHHHHHhcC
Q 010340 55 AEFSLADLRAATN----NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFT--KHAW-PDPKQFADEAWGVGKL 127 (512)
Q Consensus 55 ~~~~~~~~~~~~~----~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l 127 (512)
..++...+..... .+.....+..++.|.++.||+.... +..+++|+.. .... .....+.+|+.+++.+
T Consensus 19 ~~ld~~~l~~~l~~~~~~~~~~~~~~~l~~G~sn~~y~v~~~-----~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L 93 (359)
T 3dxp_A 19 QRFDTEALEAWMRQHVEGFAGPLSVEQFKGGQSNPTFKLVTP-----GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDAL 93 (359)
T ss_dssp -CCCHHHHHHHHHHHSTTCCCCCEEEECCC-CCSCEEEEECS-----SCEEEEECCCC----------CHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCCCCCceEEEcCCcccceEEEEEEC-----CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHh
Confidence 3456655544432 2344445778899999999998764 3458889876 3321 2245788999999999
Q ss_pred C--CCCccceEEEEeeC---CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----------
Q 010340 128 R--HKRLANLIGYCCDG---DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE----------- 191 (512)
Q Consensus 128 ~--h~niv~l~~~~~~~---~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------- 191 (512)
. +..+++++.++.+. +..++||||++|.++.+.. ...++...+..++.++++.|..||+.
T Consensus 94 ~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~ 169 (359)
T 3dxp_A 94 AGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYG 169 (359)
T ss_dssp TTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSS
T ss_pred hcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccC
Confidence 6 45689999998876 4589999999998775422 23477888889999999999999972
Q ss_pred ----------------------------------------------CCccccccCccceeecCCCC--CeeecccCccc
Q 010340 192 ----------------------------------------------GRPLYHDLNAYRVLFDENGD--PRLSCFGLMKN 222 (512)
Q Consensus 192 ----------------------------------------------~~iiH~Dlkp~Nill~~~~~--~kl~Dfg~a~~ 222 (512)
..++|+|+++.|||++.++. +.|+||+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 170 KPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 23899999999999987653 68999998764
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.7e-11 Score=107.54 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=99.8
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..+++++++.|+++.+++.+|.++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 120 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVAL 120 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHH
Confidence 557888999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
..+|++++|+..|+++++++|.+..++
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~~~~~~~~ 147 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLRPNEGKVH 147 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHcCcHHHHHHHHHHHHhcCccchHHH
Confidence 999999999999999999999876543
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.4e-12 Score=111.43 Aligned_cols=88 Identities=7% Similarity=-0.094 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHh
Q 010340 421 TAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAAS 500 (512)
Q Consensus 421 ~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 500 (512)
.+-..|+++++++|. +..+++++|.+++..|+|++|+..|+++++++|+++.+|+.+|.++..+|+|++|+..|+++++
T Consensus 5 ~~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 5 SGGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp -CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 334568999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhcC
Q 010340 501 LEEKRQRSG 509 (512)
Q Consensus 501 l~p~~~~~~ 509 (512)
++|++..++
T Consensus 84 l~p~~~~~~ 92 (148)
T 2vgx_A 84 MDIXEPRFP 92 (148)
T ss_dssp HSTTCTHHH
T ss_pred cCCCCchHH
Confidence 999987665
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1e-11 Score=118.64 Aligned_cols=102 Identities=8% Similarity=0.058 Sum_probs=76.9
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHH--------------------------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDA-------------------------- 456 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 456 (512)
...+..+|..++..|++++|+..|+++++.+|. +..+++++|.+|..+|++++
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 344555666666666666666666666666665 56666666666666665555
Q ss_pred --------HHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 457 --------ALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 457 --------A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
|+..++++++++|+++.+++++|.++...|++++|+..|+++++++|++
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 4566677788899999999999999999999999999999999999987
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=114.18 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=102.0
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+...+...|..++..|++++|+..|+++++..|. +..+++++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 202 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVT 202 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 3567888999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+..+|++++|+..|+++++++|++..++
T Consensus 203 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 203 YAYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHccCHHHHHHHHHHHHccCcchHHHH
Confidence 9999999999999999999999987665
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.29 E-value=8.1e-12 Score=98.82 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=66.5
Q ss_pred CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 433 GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
+|. ++.+++++|.+|+.+|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++++.|++..
T Consensus 3 ~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 3 DPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp --C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred Ccc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 577 88999999999999999999999999999999999999999999999999999999999999999887643
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-11 Score=120.90 Aligned_cols=103 Identities=18% Similarity=0.242 Sum_probs=99.9
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+..+|.++...|++++|+..|+++++.+|. +..+|+++|.++..+|++++|+..|+++++++|+++.+++.+|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4677889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhh
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+..+|++++|+..|+++++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999987
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.28 E-value=7.9e-12 Score=117.61 Aligned_cols=107 Identities=6% Similarity=-0.061 Sum_probs=90.8
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCC---CChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTM---VSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
++..+..+|.+++..|+|++|+..|+++++. +. ....+|+++|.+|..+|++++|+..++++++++|+++.+++.+
T Consensus 36 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 114 (272)
T 3u4t_A 36 SPYIYNRRAVCYYELAKYDLAQKDIETYFSK-VNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQI 114 (272)
T ss_dssp CSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT-SCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-cCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 3557888899999999999999999999983 43 1234588999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
|.++..+|++++|+..|+++++++|.+..+|
T Consensus 115 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 145 (272)
T 3u4t_A 115 GSYFYNKGNFPLAIQYMEKQIRPTTTDPKVF 145 (272)
T ss_dssp HHHHHHTTCHHHHHHHHGGGCCSSCCCHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHhhcCCCcHHHH
Confidence 9999999999999999999999988876654
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=113.90 Aligned_cols=106 Identities=14% Similarity=0.082 Sum_probs=91.6
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHh--------------------------cCCCCChHHHhhhHHHhhhcCChHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFID--------------------------VGTMVSPTVYARRSLCHLMCDQPDA 456 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (512)
+..+..+|..+...|++++|+..|+++++ .+|. ...++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 45566666666666666666666666666 7676 78899999999999999999
Q ss_pred HHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 457 ALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 457 A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 210 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 210 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977654
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.27 E-value=3e-11 Score=118.92 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=101.2
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
..++.+|..++..|+|++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+++.+|.++.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 143 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 143 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 484 KLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 484 ~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
.+|++++|+..|+++++++|++..++.
T Consensus 144 ~~g~~~~A~~~~~~~~~~~~~~~~~~~ 170 (368)
T 1fch_A 144 NESLQRQACEILRDWLRYTPAYAHLVT 170 (368)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTGGGCC
T ss_pred HcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 999999999999999999999887664
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.27 E-value=4.2e-11 Score=92.21 Aligned_cols=85 Identities=12% Similarity=0.114 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
..+..+...|..++..|+|++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34678889999999999999999999999999998 89999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 010340 481 ALAKLD 486 (512)
Q Consensus 481 ~~~~~~ 486 (512)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998765
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.1e-11 Score=124.39 Aligned_cols=105 Identities=20% Similarity=0.275 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
.+.+..++.+|..+++.|+|++|+..|+++++.+|+ ..+|+++|.+|..+|++++|+..++++++++|++..+|+.+|
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 457899999999999999999999999999999874 889999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
.++..+|++++|+..|+++++++|.+.
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCCG
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999998543
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.8e-11 Score=114.85 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=96.4
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC--ChHHHhhhHHHhhh--------cCChHHHHHHHHHHHhhCCCcH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--SPTVYARRSLCHLM--------CDQPDAALRDAMQAQCVYPDWS 472 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~~~--------~~~~~~A~~~~~~al~~~p~~~ 472 (512)
+..++.+|.++++.|+|++|+..|+++++..|.. ...+++++|.+++. +|++++|+..|+++++.+|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 6788999999999999999999999999998752 36789999999999 9999999999999999999997
Q ss_pred HHH-----------------HHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 473 TAF-----------------YMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 473 ~~~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
.++ +.+|.+|..+|+|++|+..|+++++.+|++.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 776 8999999999999999999999999999843
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=108.19 Aligned_cols=105 Identities=11% Similarity=0.006 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHh-hhcCChHHHHHHHHHHHhhCCCcHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCH-LMCDQPDAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
...++..+..+|.++...|++++|+..|+++++.+| ++.++..++.+. ...++..+|+..++++++++|+++.+++.
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~ 113 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACE 113 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHH
Confidence 445688899999999999999999999999998877 355555555443 33345556899999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 478 QAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 478 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+|.++..+|++++|+..|+++++++|+.
T Consensus 114 la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 114 LAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999975
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=122.61 Aligned_cols=107 Identities=19% Similarity=0.195 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
...++..+..+|..+++.|+|++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+++.+
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 100 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQR 100 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 3356888999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
|.+|..+|++++|+..|+++++++|++.
T Consensus 101 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 101 GHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999876
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.2e-11 Score=121.15 Aligned_cols=106 Identities=15% Similarity=0.092 Sum_probs=95.7
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+...|..+.+.|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|++..+++.+|.++
T Consensus 271 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 349 (388)
T 1w3b_A 271 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVL 349 (388)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 567888899999999999999999999999888 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
..+|++++|+..|+++++++|++..++
T Consensus 350 ~~~g~~~~A~~~~~~a~~~~p~~~~a~ 376 (388)
T 1w3b_A 350 QQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHHH
Confidence 999999999999999999999877654
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.8e-11 Score=121.81 Aligned_cols=106 Identities=10% Similarity=-0.004 Sum_probs=78.5
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+..+|..+.+.|++++|+..|+++++.+|. ...++.++|.++..+|++++|+..|+++++++|+++.+|+.+|.++
T Consensus 101 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 179 (388)
T 1w3b_A 101 IDGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVF 179 (388)
T ss_dssp HHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 556667777777777777777777777777776 7777777777777777777777777777777777777777777777
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
...|++++|+..|+++++++|++..++
T Consensus 180 ~~~g~~~~A~~~~~~al~~~p~~~~~~ 206 (388)
T 1w3b_A 180 NAQGEIWLAIHHFEKAVTLDPNFLDAY 206 (388)
T ss_dssp HTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 777777777777777777777765543
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.7e-11 Score=115.24 Aligned_cols=105 Identities=11% Similarity=0.025 Sum_probs=76.2
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+..+|..+...|++++|+..|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|...
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 152 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAY 152 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 345667777777777777777777777777777 7777777777777777777777777777777777777777777444
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+..+++++|+..|+++++++|++..+
T Consensus 153 ~~~~~~~~A~~~~~~a~~~~p~~~~~ 178 (272)
T 3u4t_A 153 YYNKEYVKADSSFVKVLELKPNIYIG 178 (272)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccchHH
Confidence 44457777777777777777776543
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.25 E-value=5e-11 Score=108.26 Aligned_cols=108 Identities=15% Similarity=0.071 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhc-CChHHHHHHHHHHHh--hCCCcHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC-DQPDAALRDAMQAQC--VYPDWSTAFYM 477 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~ 477 (512)
.+...+...|..+...|++++|+..|+++++.+|. +..++.++|.+|... |++++|+..++++++ .+|.+..+++.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 40 KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 34778888899999999999999999999999888 888999999999999 999999999999998 77777899999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 478 QAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 478 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|.++..+|++++|+..|+++++++|.+..++
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 150 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAAQPQFPPAF 150 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCchHH
Confidence 99999999999999999999999988876544
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.25 E-value=1e-11 Score=116.79 Aligned_cols=129 Identities=13% Similarity=0.090 Sum_probs=96.3
Q ss_pred ccCC-CCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCC--ccceEEEEeeCCeeEEEEEcc
Q 010340 76 SESG-EKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR--LANLIGYCCDGDERLLVAEYM 152 (512)
Q Consensus 76 ~~lG-~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~E~~ 152 (512)
..++ .|..+.||++... ++..++||+.... ....+.+|+.+++.+.+.+ +.++++++..++..++||||+
T Consensus 25 ~~~~~gg~~~~v~~~~~~----~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 25 AQQTIGCSDAAVFRLSAQ----GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp EECSCTTSSCEEEEEECT----TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred EecccCCCCceEEEEecC----CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 3444 5566999999754 4566999997654 2356889999999995444 567999888888899999999
Q ss_pred CCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 010340 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG---------------------------------------- 192 (512)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------- 192 (512)
+|.+|. .. . .+ ...++.+++..|..||+..
T Consensus 98 ~G~~l~--~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 98 PGQDLL--SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp SSEETT--TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred CCcccC--cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 998884 21 1 11 2246677777888887642
Q ss_pred -----------------CccccccCccceeecCCCCCeeecccCcc
Q 010340 193 -----------------RPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 193 -----------------~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.++|+|++|.|||++.++.+.|+||+.+.
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 18999999999999877667799999864
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.25 E-value=5.6e-11 Score=116.01 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh----HHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP----TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 476 (512)
.........|..+++.|++++|+..|+++++..|. +. .++..+|.++..+|++++|+..++++++++|+++.+++
T Consensus 232 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 310 (359)
T 3ieg_A 232 KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALK 310 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34555667799999999999999999999999998 65 45778999999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 477 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
.+|.++..+|++++|+..|+++++++|++..++.
T Consensus 311 ~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 344 (359)
T 3ieg_A 311 DRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIRE 344 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHH
Confidence 9999999999999999999999999999877653
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.9e-11 Score=111.50 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=87.6
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHh--hCCCcHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQC--VYPDWSTAFYMQA 479 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~g 479 (512)
.+..+...|..++..|++++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++ ..|.+..+++.+|
T Consensus 70 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la 148 (252)
T 2ho1_A 70 SADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLG 148 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHH
Confidence 4677788888888888888888888888888887 788888888888888888888888888888 7788888888888
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
.++..+|++++|+..|+++++++|.+..+
T Consensus 149 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 177 (252)
T 2ho1_A 149 LVSLQMKKPAQAKEYFEKSLRLNRNQPSV 177 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCcccHHH
Confidence 88888888888888888888888776544
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=126.59 Aligned_cols=110 Identities=24% Similarity=0.312 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHH
Q 010340 398 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 398 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
.....+..++.+|..+++.|+|++|+..|+++++.+|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34456899999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 478 QAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 478 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|.++..+|++++|+..|+ ++.++|+....+
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~ 129 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFDGAS 129 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC---------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCChHH
Confidence 9999999999999999995 999999865543
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=116.74 Aligned_cols=106 Identities=13% Similarity=0.017 Sum_probs=90.4
Q ss_pred HHHHHHHHhHHHhh-hcHHHHHHHHHHHHhcCCCCC-----hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHH---
Q 010340 403 MLEARKRGDVAFRE-KEFKTAVDCYSQFIDVGTMVS-----PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWST--- 473 (512)
Q Consensus 403 ~~~~~~~g~~~~~~-~~~~~Ai~~~~~al~~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~--- 473 (512)
+..+...|.++... |++++|+.+|++|+++.|... ..++.++|.+|..+|+|++|+..|++++++.|++..
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 196 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQW 196 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGG
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccH
Confidence 66788999999996 999999999999999876521 567999999999999999999999999999998754
Q ss_pred ----HHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 474 ----AFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 474 ----~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+|+++|.++..+|++++|+.+|+++++++|+...+
T Consensus 197 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 197 SLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999987654
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.8e-11 Score=101.54 Aligned_cols=71 Identities=8% Similarity=-0.016 Sum_probs=67.9
Q ss_pred ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 437 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
.+.++.++|.++++.|+|++|++.|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 77 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA 77 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch
Confidence 46789999999999999999999999999999999999999999999999999999999999999998754
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.23 E-value=7e-11 Score=115.50 Aligned_cols=101 Identities=13% Similarity=0.157 Sum_probs=94.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.+..+..+|.++++.|+|++|+..|++||+++|. +..+|+++|.+|..+|++++|+.+|++|++++|++..+++.+|.+
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHH-HHHHHHHHhchh
Q 010340 482 LAKLDMHKDA-ADMLKEAASLEE 503 (512)
Q Consensus 482 ~~~~~~~~~A-~~~~~~al~l~p 503 (512)
+..+|++++| ...|++.+..-+
T Consensus 274 ~~~~~~~~~a~~~~~~~~~~~~~ 296 (336)
T 1p5q_A 274 QQRIRRQLAREKKLYANMFERLA 296 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999 567777765533
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.2e-12 Score=111.67 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=88.4
Q ss_pred HhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH-HHHcCCh
Q 010340 410 GDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA-LAKLDMH 488 (512)
Q Consensus 410 g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~-~~~~~~~ 488 (512)
+..++..|+|++|+..|+++++.+|. +..+|+.+|.+|...|++++|+..|+++++++|+++.+++.+|.+ +...|++
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 34456789999999999999999998 999999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHHHhchhhhhhcC
Q 010340 489 --KDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 489 --~~A~~~~~~al~l~p~~~~~~ 509 (512)
++|+..|+++++++|++..++
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHH
T ss_pred chHHHHHHHHHHHHhCCCcHHHH
Confidence 999999999999999987655
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.22 E-value=4.4e-11 Score=111.17 Aligned_cols=106 Identities=14% Similarity=0.001 Sum_probs=100.3
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.+..+..+|..++..|++++|+..|+++++.+|. ...+++.+|.+|...|++++|++.++++++++|++..+++.+|.+
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 114 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGF 114 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHH
Confidence 3778999999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHh--chhhhhhc
Q 010340 482 LAKLDMHKDAADMLKEAAS--LEEKRQRS 508 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~--l~p~~~~~ 508 (512)
+..+|++++|+..|+++++ .+|.+..+
T Consensus 115 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 143 (252)
T 2ho1_A 115 LYEQKRYEEAYQRLLEASQDTLYPERSRV 143 (252)
T ss_dssp HHHTTCHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred HHHHhHHHHHHHHHHHHHhCccCcccHHH
Confidence 9999999999999999999 77766544
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.22 E-value=6.6e-11 Score=114.12 Aligned_cols=102 Identities=15% Similarity=0.163 Sum_probs=99.1
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4678889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhh
Q 010340 482 LAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
+..+|++++|+..|+++++++|+
T Consensus 250 ~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 250 YSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999998
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.1e-11 Score=113.44 Aligned_cols=94 Identities=12% Similarity=0.074 Sum_probs=87.9
Q ss_pred HHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHH-H
Q 010340 413 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKD-A 491 (512)
Q Consensus 413 ~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~-A 491 (512)
+...|++++|+..|+++++..|. ++.+|+++|.++..+|++++|+..++++++++|+++.+++++|.++..+|++++ |
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34569999999999999999998 999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHHHhchhhhhh
Q 010340 492 ADMLKEAASLEEKRQR 507 (512)
Q Consensus 492 ~~~~~~al~l~p~~~~ 507 (512)
..+++++++++|++..
T Consensus 255 ~~~~~~~~~~~P~~~~ 270 (291)
T 3mkr_A 255 NRYLSQLKDAHRSHPF 270 (291)
T ss_dssp HHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHhCCCChH
Confidence 6889999999999864
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.22 E-value=7.9e-11 Score=106.89 Aligned_cols=107 Identities=12% Similarity=0.027 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhHHHhh-hcHHHHHHHHHHHHh--cCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHH
Q 010340 401 RDMLEARKRGDVAFRE-KEFKTAVDCYSQFID--VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~-~~~~~Ai~~~~~al~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
.+...+...|..++.. |++++|+..|+++++ ..|. ...+++++|.++...|++++|+..++++++.+|+++.+++.
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 152 (225)
T 2vq2_A 74 DSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE 152 (225)
T ss_dssp TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHH
Confidence 3477889999999999 999999999999999 5555 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhchh-hhhhc
Q 010340 478 QAVALAKLDMHKDAADMLKEAASLEE-KRQRS 508 (512)
Q Consensus 478 ~g~~~~~~~~~~~A~~~~~~al~l~p-~~~~~ 508 (512)
+|.++..+|++++|+..|+++++++| .+..+
T Consensus 153 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 184 (225)
T 2vq2_A 153 LARTKMLAGQLGDADYYFKKYQSRVEVLQADD 184 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999999999999999999999999 76554
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.3e-11 Score=117.59 Aligned_cols=107 Identities=18% Similarity=0.139 Sum_probs=100.3
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcC---------CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVG---------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~---------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 472 (512)
++..+...|..++..|++++|+..|+++++.. |. ...++.++|.+|..+|++++|+..++++++++|+++
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 270 (330)
T 3hym_B 192 DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNA 270 (330)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCS
T ss_pred ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccch
Confidence 46778899999999999999999999999875 44 678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 473 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.+++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 271 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 307 (330)
T 3hym_B 271 STYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSV 307 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHH
Confidence 9999999999999999999999999999999887654
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=5.1e-11 Score=125.19 Aligned_cols=106 Identities=12% Similarity=0.014 Sum_probs=101.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+..+|.+++..|++++|+..|+++++++|. +..+++++|.+|..+|++++|++.|+++++++|++..+++++|.+
T Consensus 56 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 134 (568)
T 2vsy_A 56 HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNW 134 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4778899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHc---CChHHHHHHHHHHHhchhhhhhc
Q 010340 482 LAKL---DMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 482 ~~~~---~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+..+ |++++|+..|+++++++|++..+
T Consensus 135 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 164 (568)
T 2vsy_A 135 RRRLCDWRALDVLSAQVRAAVAQGVGAVEP 164 (568)
T ss_dssp HHHTTCCTTHHHHHHHHHHHHHHTCCCSCH
T ss_pred HHHhhccccHHHHHHHHHHHHhcCCcccCh
Confidence 9999 99999999999999999986543
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-11 Score=104.46 Aligned_cols=85 Identities=8% Similarity=-0.059 Sum_probs=78.1
Q ss_pred HHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchh
Q 010340 424 DCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 503 (512)
Q Consensus 424 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 503 (512)
..|+++++++|. +...++++|.+++..|+|++|+..|+++++++|+++.+|+.+|.++..+|+|++|+..|+++++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 467889999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcC
Q 010340 504 KRQRSG 509 (512)
Q Consensus 504 ~~~~~~ 509 (512)
++..++
T Consensus 84 ~~~~~~ 89 (142)
T 2xcb_A 84 NEPRFP 89 (142)
T ss_dssp TCTHHH
T ss_pred CCcHHH
Confidence 987654
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-10 Score=112.54 Aligned_cols=107 Identities=10% Similarity=0.046 Sum_probs=100.7
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..++.+|..++..|+|++|+..|+++++.+|. +..+++.+|.++...|++++|+..++++++++|++..+++.+|.++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 99 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 99 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHH
Confidence 456788999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
..+|++++|+..|+++++++|++...+.
T Consensus 100 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 127 (327)
T 3cv0_A 100 TNEHNANAALASLRAWLLSQPQYEQLGS 127 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTTTC--
T ss_pred HHcCCHHHHHHHHHHHHHhCCccHHHHH
Confidence 9999999999999999999999876653
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.19 E-value=6.5e-11 Score=108.59 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=93.5
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh---HHHhhhHHHhhh------------------cCChHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP---TVYARRSLCHLM------------------CDQPDAALRDA 461 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~---~~~~~~~~~~~~------------------~~~~~~A~~~~ 461 (512)
...++.+|.++++.|+|++|+..|+++++..|. +. .+++.+|.++.. +|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 467889999999999999999999999999998 54 479999999886 57999999999
Q ss_pred HHHHhhCCCcHHHH-----------------HHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 462 MQAQCVYPDWSTAF-----------------YMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 462 ~~al~~~p~~~~~~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
+++++.+|++..++ +.+|.+|+..|+|++|+..|+++++..|++.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 99999999997665 6789999999999999999999999999865
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.19 E-value=8.4e-11 Score=112.45 Aligned_cols=109 Identities=8% Similarity=-0.079 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhH--HHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRS--LCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
.+...+..+|.++.+.|++++|+..|+++++.+|. +....+..+ ..+...|++++|+..|+++++.+|+++.+|+.+
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 34678889999999999999999999999999887 653333323 333455899999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
|.++..+|++++|+..|+++++++|++..++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~ 238 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETLI 238 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999999999999887653
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.8e-10 Score=108.83 Aligned_cols=110 Identities=8% Similarity=0.018 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHhHHHhhh--cHHHHHHHHHHHHhcCCCCChHHHhhhHHHh----hhc---CChHHHHHHHHHHHhhCCC
Q 010340 400 MRDMLEARKRGDVAFREK--EFKTAVDCYSQFIDVGTMVSPTVYARRSLCH----LMC---DQPDAALRDAMQAQCVYPD 470 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~--~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~----~~~---~~~~~A~~~~~~al~~~p~ 470 (512)
.....+++.+|.++...+ ++++|+..++++|..+|. +..+|+.|+.++ ..+ +++++++..++++++++|.
T Consensus 64 P~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk 142 (306)
T 3dra_A 64 ASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK 142 (306)
T ss_dssp TTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC
Confidence 355888999999999999 999999999999999999 999999999999 777 7899999999999999999
Q ss_pred cHHHHHHHHHHHHHcCChH--HHHHHHHHHHhchhhhhhcCC
Q 010340 471 WSTAFYMQAVALAKLDMHK--DAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 471 ~~~~~~~~g~~~~~~~~~~--~A~~~~~~al~l~p~~~~~~~ 510 (512)
+..+|+.++.++..+++++ ++++.+++++++||.|..||.
T Consensus 143 ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 143 NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999 999999999999999999984
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-10 Score=100.25 Aligned_cols=102 Identities=18% Similarity=0.101 Sum_probs=93.6
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH-
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV- 480 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~- 480 (512)
++..+...|.+++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++..++..++.
T Consensus 46 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 46 NAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4778899999999999999999999999999998 99999999999999999999999999999999999999855555
Q ss_pred -HHHHcCChHHHHHHHHHHHhchhh
Q 010340 481 -ALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 481 -~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
.+...|++++|+..++++..+-+.
T Consensus 125 ~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 125 NKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccchHHHhcc
Confidence 488999999999999999876554
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=8.8e-11 Score=113.38 Aligned_cols=103 Identities=15% Similarity=-0.058 Sum_probs=83.5
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.+..+..+|..+...|++++|+..|+++++..|. ...+++.+|.+|...|++++|+..++++++++|+++.+++.+|.+
T Consensus 124 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 202 (330)
T 3hym_B 124 YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVV 202 (330)
T ss_dssp CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3566777888888888888888888888888777 777788888888888888888888888888888888888888888
Q ss_pred HHHcCChHHHHHHHHHHHhchhhh
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+..+|++++|+..|++++++.|+.
T Consensus 203 ~~~~~~~~~A~~~~~~a~~~~~~~ 226 (330)
T 3hym_B 203 AFQNGEWKTAEKWFLDALEKIKAI 226 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTT
T ss_pred HHHcccHHHHHHHHHHHHHHhhhc
Confidence 888888888888888888877654
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.5e-10 Score=117.41 Aligned_cols=108 Identities=17% Similarity=0.179 Sum_probs=99.4
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh----HHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP----TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 476 (512)
.....+...|..+++.|++++|+..|+++++..|. +. .+|.++|.++..+|++++|+..++++++++|+++.+|+
T Consensus 255 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~ 333 (450)
T 2y4t_A 255 KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALK 333 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34455566799999999999999999999999988 64 48999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 477 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.+|.++..+|++++|+..|+++++++|++..++
T Consensus 334 ~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 334 DRAEAYLIEEMYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHH
Confidence 999999999999999999999999999987654
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=5.1e-11 Score=113.99 Aligned_cols=106 Identities=12% Similarity=-0.124 Sum_probs=95.1
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----ChHHHhhhHHHhhhc-CChHHHHHHHHHHHhhCCCc----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMC-DQPDAALRDAMQAQCVYPDW---- 471 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~---- 471 (512)
.+..+...|.++.+.|+|++|+.+|++|+++.+.. ...++.++|.+|... |++++|+.+|++|+++.|..
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChH
Confidence 36789999999999999999999999999986541 146899999999996 99999999999999998865
Q ss_pred --HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 472 --STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 472 --~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
..++.++|.++..+|+|++|+..|+++++++|++..
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 578999999999999999999999999999998654
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.5e-10 Score=108.80 Aligned_cols=104 Identities=11% Similarity=0.028 Sum_probs=86.0
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH----------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS---------- 472 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---------- 472 (512)
+..+..+|..++..|+|++|+..|+++++++|. +..+++++|.+|..+|++++|+..++++++++|++.
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 155 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAE 155 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 566778888888888888888888888888888 888888888888888888888888888888888764
Q ss_pred ------------------------------------------------------------HHHHHHHHHHHHcCChHHHH
Q 010340 473 ------------------------------------------------------------TAFYMQAVALAKLDMHKDAA 492 (512)
Q Consensus 473 ------------------------------------------------------------~~~~~~g~~~~~~~~~~~A~ 492 (512)
.+++.+|.++..+|++++|+
T Consensus 156 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 235 (275)
T 1xnf_A 156 QKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSAT 235 (275)
T ss_dssp HHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHH
Confidence 66777888888888888888
Q ss_pred HHHHHHHhchhhhhh
Q 010340 493 DMLKEAASLEEKRQR 507 (512)
Q Consensus 493 ~~~~~al~l~p~~~~ 507 (512)
..|+++++++|++..
T Consensus 236 ~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 236 ALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHHTTCCTTCH
T ss_pred HHHHHHHhCCchhHH
Confidence 888888888886543
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.9e-10 Score=95.06 Aligned_cols=86 Identities=13% Similarity=-0.004 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.+...+...|..++..|++++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++++|++..+++.+|.
T Consensus 48 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 126 (133)
T 2lni_A 48 KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 126 (133)
T ss_dssp TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 34788999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCC
Q 010340 481 ALAKLDM 487 (512)
Q Consensus 481 ~~~~~~~ 487 (512)
++..+|+
T Consensus 127 ~~~~~~~ 133 (133)
T 2lni_A 127 CMMAQYN 133 (133)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9998775
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.1e-11 Score=123.74 Aligned_cols=107 Identities=18% Similarity=0.125 Sum_probs=96.0
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+..+|.++++.|+|++|+..|++|++++|. +..+|+++|.+|..+|++++|++.|++|++++|++..++..+|.+
T Consensus 39 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 39 NAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4788999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred --HHHcCChHHHHHHHH-----------HHHhchhhhhhcC
Q 010340 482 --LAKLDMHKDAADMLK-----------EAASLEEKRQRSG 509 (512)
Q Consensus 482 --~~~~~~~~~A~~~~~-----------~al~l~p~~~~~~ 509 (512)
+..+|++++|++.|+ ++++++|+...++
T Consensus 118 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 118 NKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccc
Confidence 899999999999999 8999888765543
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.3e-10 Score=117.54 Aligned_cols=109 Identities=13% Similarity=0.055 Sum_probs=103.7
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..+...|..++..|++++|+..|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34778999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
++..+|++++|+..|+++++++|++...+.
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 416 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQEKIHV 416 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCSSCSS
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcchhhHH
Confidence 999999999999999999999999877654
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-10 Score=117.29 Aligned_cols=106 Identities=8% Similarity=-0.027 Sum_probs=75.0
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhc---------CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhC-----
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDV---------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY----- 468 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~---------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~----- 468 (512)
+..|..+|.+++.+|+|++|+++|++|+++ +|. ...+|.|+|.+|..+|++++|+.++++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~-~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~ 129 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIR-SLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS 129 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTT-THHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchH-HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccc
Confidence 445666777777777888888877777764 344 56677777777777777777777777777663
Q ss_pred ---CCcHHHHHHHHHHHHHcC--ChHHHHHHHHHHHhchhhhhhcC
Q 010340 469 ---PDWSTAFYMQAVALAKLD--MHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 469 ---p~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++.+.++..+|.++..+| +|++|+.+|++|++++|++..++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~ 175 (472)
T 4g1t_A 130 PYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFT 175 (472)
T ss_dssp SSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHH
Confidence 345667777777666554 57777777777777777766543
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2e-10 Score=88.28 Aligned_cols=77 Identities=16% Similarity=0.091 Sum_probs=70.6
Q ss_pred CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 433 GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|.....+++++|.++...|++++|+..|+++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 34336788999999999999999999999999999999999999999999999999999999999999999887654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.09 E-value=7.4e-11 Score=115.40 Aligned_cols=104 Identities=14% Similarity=0.058 Sum_probs=60.1
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH-H
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA-L 482 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~-~ 482 (512)
..+..+|.++++.|+|++|+..|+++|+++|. +..+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 47889999999999999999999999999999 999999999999999999999999999999999999999999998 5
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhc
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
...+.+++|...|++++.++|++...
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 55678899999999999999987654
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.8e-10 Score=118.86 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=97.9
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc------CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 475 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 475 (512)
++..+...|..+.+.|++++|+..|+++++. +|.....+|.++|.+|.+.|++++|++.++++++++|+++.+|
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 3677888999999999999999999999987 5552278999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 476 YMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 476 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+.+|.+|..+|++++|+..|+++++++|++..++
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 587 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEIMAS 587 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHH
Confidence 9999999999999999999999999999987664
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.8e-10 Score=94.96 Aligned_cols=73 Identities=15% Similarity=0.005 Sum_probs=70.0
Q ss_pred ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 437 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.+..|+++|.+++..|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 75 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 75 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999999999987765
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-10 Score=97.53 Aligned_cols=72 Identities=15% Similarity=0.042 Sum_probs=68.0
Q ss_pred hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCC-------cHH-----HHHHHHHHHHHcCChHHHHHHHHHHHhc----
Q 010340 438 PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD-------WST-----AFYMQAVALAKLDMHKDAADMLKEAASL---- 501 (512)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----~~~~~g~~~~~~~~~~~A~~~~~~al~l---- 501 (512)
...+.++|..++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 567899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---hhhhhhcC
Q 010340 502 ---EEKRQRSG 509 (512)
Q Consensus 502 ---~p~~~~~~ 509 (512)
+|++..+|
T Consensus 91 ~e~~pd~~~A~ 101 (159)
T 2hr2_A 91 GELNQDEGKLW 101 (159)
T ss_dssp CCTTSTHHHHH
T ss_pred ccCCCchHHHH
Confidence 99999888
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.5e-10 Score=118.09 Aligned_cols=110 Identities=8% Similarity=-0.096 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHhHHHhhhc----------HHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcC--ChHHHHHHHHHHHhh
Q 010340 400 MRDMLEARKRGDVAFREKE----------FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD--QPDAALRDAMQAQCV 467 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~----------~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~ 467 (512)
.+...+|+.++.++...|+ +++|+..++++++.+|+ ++.+|+.|+.++..++ ++++|++++++++++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~ 138 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEA 138 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh
Confidence 3557889999999999998 99999999999999999 9999999999999999 679999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcC-ChHHHHHHHHHHHhchhhhhhcCC
Q 010340 468 YPDWSTAFYMQAVALAKLD-MHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 468 ~p~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
+|.+..||+.+|.++..+| .+++|+++++++++++|.|..||.
T Consensus 139 d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 139 DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 9999999999999999999 999999999999999999999985
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.07 E-value=4.6e-10 Score=105.51 Aligned_cols=105 Identities=10% Similarity=0.011 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc--------CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhh-----
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDV--------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV----- 467 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~--------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~----- 467 (512)
..+..+...|.++...|++++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 45778999999999999999999999999987 355 6889999999999999999999999999999
Q ss_pred ---CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 468 ---YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 468 ---~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
.|....+++.+|.++..+|++++|+..|++++++.++..
T Consensus 162 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~ 203 (283)
T 3edt_B 162 GPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKE 203 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 888899999999999999999999999999999977643
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.8e-10 Score=90.69 Aligned_cols=86 Identities=8% Similarity=-0.106 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
...+..+..+|.+++..|+|++|+..|+++++++|. +..+++++|.+|..+|++++|+..+++++++.|+++.......
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 456888999999999999999999999999999999 9999999999999999999999999999999999988765444
Q ss_pred HHHHHcC
Q 010340 480 VALAKLD 486 (512)
Q Consensus 480 ~~~~~~~ 486 (512)
.+....+
T Consensus 103 ai~~~~~ 109 (117)
T 3k9i_A 103 AILFYAD 109 (117)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 4443333
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.07 E-value=4.1e-10 Score=105.80 Aligned_cols=100 Identities=9% Similarity=-0.015 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcC--------CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhh-----
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVG--------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV----- 467 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~----- 467 (512)
..+..+..+|..++..|+|++|+..|++++++. |. ...++.++|.+|..+|++++|+..+++++++
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 457789999999999999999999999999873 44 6788999999999999999999999999998
Q ss_pred ---CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhc
Q 010340 468 ---YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 501 (512)
Q Consensus 468 ---~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 501 (512)
+|....+++++|.++..+|++++|+..|++++++
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5888999999999999999999999999999999
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.9e-10 Score=90.18 Aligned_cols=69 Identities=14% Similarity=0.033 Sum_probs=67.1
Q ss_pred ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 437 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+..+++++|.+++..|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999999999999999999999999999999999999987
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.4e-11 Score=117.01 Aligned_cols=182 Identities=14% Similarity=0.080 Sum_probs=120.1
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCC--ccceEEEEeeCC---eeEEE
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKR--LANLIGYCCDGD---ERLLV 148 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv 148 (512)
+..++.|..+.||++. ..+++|+.... .....+.+|+.+|+.+ .+.. +.+++......+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~--------~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN--------RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST--------TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC--------CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4557889999999864 12889986533 1246789999999888 4433 455655544333 35899
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE------------------------------------- 191 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------- 191 (512)
||+++|.+|.+... ..++..++..++.+++..|..||+.
T Consensus 95 m~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999988865432 2466777777888888888888851
Q ss_pred --------------------CCccccccCccceeecC--CCCCeeecccCccccCCCCccccCccc---CCcccccC---
Q 010340 192 --------------------GRPLYHDLNAYRVLFDE--NGDPRLSCFGLMKNSRDGKSYSTNLAY---TPPEYLRN--- 243 (512)
Q Consensus 192 --------------------~~iiH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~t~~y---~aPE~~~~--- 243 (512)
..++|+|++|.|||++. ...+.|+||+.+..............+ ..|+....
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 12699999999999987 456789999987654332111111111 22222110
Q ss_pred -----------CCCCCCCcEEehHHHHHHHHhCCCCCC
Q 010340 244 -----------GRVTPESVIFSFGTVLLDLLSGKHIPP 270 (512)
Q Consensus 244 -----------~~~~~~~Dv~slG~~l~elltg~~~~~ 270 (512)
.......+.|++|.++|.+.+|..++.
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 001122578999999999999986543
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.06 E-value=3.5e-10 Score=108.13 Aligned_cols=103 Identities=13% Similarity=0.162 Sum_probs=90.1
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc------CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---- 471 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 471 (512)
.+..+...|.++...|+|++|+.+|++|++. ++.....+|+|+|.+|.++|+|++|+..+++|+++.++.
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 3557899999999999999999999999952 122145689999999999999999999999999987654
Q ss_pred --HHHHHHHHHHHHHcCC-hHHHHHHHHHHHhchhh
Q 010340 472 --STAFYMQAVALAKLDM-HKDAADMLKEAASLEEK 504 (512)
Q Consensus 472 --~~~~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~ 504 (512)
+.+|+++|.++..+|+ +++|+.+|++|+++...
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 8899999999999995 79999999999988764
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.1e-09 Score=96.02 Aligned_cols=85 Identities=8% Similarity=-0.081 Sum_probs=78.5
Q ss_pred hhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc--HHHHHHHHHHHHHcCChHHHH
Q 010340 415 REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--STAFYMQAVALAKLDMHKDAA 492 (512)
Q Consensus 415 ~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~~~~~~~~~A~ 492 (512)
..++..+|+..|+++++.+|. +..+++++|.++..+|++++|+..|+++++++|++ +.+++++|.++..+|++++|+
T Consensus 86 ~~~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 86 QQAAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred hhcccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 334455689999999999999 99999999999999999999999999999999986 569999999999999999999
Q ss_pred HHHHHHHh
Q 010340 493 DMLKEAAS 500 (512)
Q Consensus 493 ~~~~~al~ 500 (512)
..|+++|.
T Consensus 165 ~~y~~al~ 172 (176)
T 2r5s_A 165 SKYRRQLY 172 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.05 E-value=4.8e-10 Score=100.39 Aligned_cols=98 Identities=9% Similarity=0.078 Sum_probs=84.5
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
...+..+|.++++.|+|++|+..|+++++++|. +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 567889999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHH-HHHHHHHhc
Q 010340 483 AKLDMHKDAA-DMLKEAASL 501 (512)
Q Consensus 483 ~~~~~~~~A~-~~~~~al~l 501 (512)
..+++++++. ..|.+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 9999999988 555555543
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.04 E-value=7.2e-10 Score=106.79 Aligned_cols=103 Identities=9% Similarity=-0.066 Sum_probs=65.1
Q ss_pred HHHHHHHHHhHHHh-------hhcH-------HHHHHHHHHHHh-cCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHh
Q 010340 402 DMLEARKRGDVAFR-------EKEF-------KTAVDCYSQFID-VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQC 466 (512)
Q Consensus 402 ~~~~~~~~g~~~~~-------~~~~-------~~Ai~~~~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 466 (512)
.+..++..|..+.. .|++ ++|+..|++|++ ++|. +..+|.++|..+...|++++|+..|+++++
T Consensus 49 ~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 127 (308)
T 2ond_A 49 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLA 127 (308)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Confidence 35555555555542 3553 666666666666 4665 666666666666666666666666666666
Q ss_pred hCCCcHH-HHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 467 VYPDWST-AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 467 ~~p~~~~-~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+.|+++. +|+.+|.++..+|++++|+..|++|++++|.+
T Consensus 128 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 128 IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp SSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC
T ss_pred ccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Confidence 6666665 66666666666666666666666666666644
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.03 E-value=8.3e-10 Score=112.57 Aligned_cols=92 Identities=15% Similarity=0.175 Sum_probs=84.3
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.+..+..+|.++++.|+|++|+..|++||+++|. +..+|+++|.+|+.+|+|++|+.+|++|++++|++..++..+|.+
T Consensus 316 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 394 (457)
T 1kt0_A 316 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMC 394 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHH
Q 010340 482 LAKLDMHKDAADM 494 (512)
Q Consensus 482 ~~~~~~~~~A~~~ 494 (512)
+..++++++|...
T Consensus 395 ~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 395 QKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=6.6e-10 Score=92.98 Aligned_cols=93 Identities=9% Similarity=0.037 Sum_probs=84.7
Q ss_pred hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcC---ChHHHHHHHHHHHhhC-C-CcHHHHHHHHHHHHHcCChHH
Q 010340 416 EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD---QPDAALRDAMQAQCVY-P-DWSTAFYMQAVALAKLDMHKD 490 (512)
Q Consensus 416 ~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~~g~~~~~~~~~~~ 490 (512)
....+.+.+.|.+.++.++. +.++.+++|.|+.+.+ ++++|+..++.+++.+ | +..+++|++|.+++++|+|++
T Consensus 11 ~~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 34567888888999988887 9999999999999998 7779999999999999 8 679999999999999999999
Q ss_pred HHHHHHHHHhchhhhhhcC
Q 010340 491 AADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 491 A~~~~~~al~l~p~~~~~~ 509 (512)
|+.+++++|+++|+|..|+
T Consensus 90 A~~y~~~lL~ieP~n~QA~ 108 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAK 108 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCCCCHHHH
Confidence 9999999999999998764
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.03 E-value=7.8e-10 Score=95.73 Aligned_cols=83 Identities=8% Similarity=-0.019 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..+..+|.++++.|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+.+|+++++++|++..+|+++|.
T Consensus 43 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l 121 (164)
T 3sz7_A 43 ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGL 121 (164)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 45888999999999999999999999999999999 99999999999999999999999999999999999999999887
Q ss_pred HHHH
Q 010340 481 ALAK 484 (512)
Q Consensus 481 ~~~~ 484 (512)
+...
T Consensus 122 ~~~~ 125 (164)
T 3sz7_A 122 ETTK 125 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.2e-09 Score=89.50 Aligned_cols=87 Identities=17% Similarity=0.056 Sum_probs=83.0
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+...|..++..|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++..+++.+|.+
T Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 123 (131)
T 2vyi_A 45 NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIA 123 (131)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 4678889999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChH
Q 010340 482 LAKLDMHK 489 (512)
Q Consensus 482 ~~~~~~~~ 489 (512)
+..+|+++
T Consensus 124 ~~~~~~~~ 131 (131)
T 2vyi_A 124 ELKLREAP 131 (131)
T ss_dssp HHHHTTCC
T ss_pred HHHHhcCC
Confidence 99999863
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.3e-10 Score=115.09 Aligned_cols=106 Identities=12% Similarity=0.021 Sum_probs=98.1
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChH------HHhhhHHHhhh---cCChHHHHHHHHHHHhhCCCcHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPT------VYARRSLCHLM---CDQPDAALRDAMQAQCVYPDWST 473 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~------~~~~~~~~~~~---~~~~~~A~~~~~~al~~~p~~~~ 473 (512)
...+...|..++..|++++|+..|+++++..|. +.. +++++|.++.. +|++++|+..++++++++|+++.
T Consensus 372 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 450 (514)
T 2gw1_A 372 PEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQ 450 (514)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHH
Confidence 567888999999999999999999999998887 544 89999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 474 AFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 474 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 451 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 451 AKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 999999999999999999999999999999987665
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.8e-10 Score=96.36 Aligned_cols=89 Identities=10% Similarity=0.029 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH-HHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS-TAFYMQA 479 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~g 479 (512)
..+..+..+|.++++.|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.+|+++++++|++. .+...++
T Consensus 61 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~ 139 (162)
T 3rkv_A 61 KNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMK 139 (162)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 44678999999999999999999999999999999 999999999999999999999999999999999998 6677888
Q ss_pred HHHHHcCChHH
Q 010340 480 VALAKLDMHKD 490 (512)
Q Consensus 480 ~~~~~~~~~~~ 490 (512)
.+...++++++
T Consensus 140 ~~~~~~~~~~~ 150 (162)
T 3rkv_A 140 IVTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 87777665543
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.3e-09 Score=104.93 Aligned_cols=104 Identities=11% Similarity=0.034 Sum_probs=87.9
Q ss_pred HHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhh-hcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHL-MCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 405 ~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
.+...|..+.+.|++++|+..|++|++.+|. ...+|...+.... .+|++++|+..|+++++++|+++.+|..+|.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 7888898889999999999999999999887 7778876666644 3699999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHhc---hhh-hhhcC
Q 010340 484 KLDMHKDAADMLKEAASL---EEK-RQRSG 509 (512)
Q Consensus 484 ~~~~~~~A~~~~~~al~l---~p~-~~~~~ 509 (512)
.+|++++|+..|++|++. +|+ +...|
T Consensus 215 ~~g~~~~A~~~~~~al~~~~l~p~~~~~l~ 244 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTSGSLPPEKSGEIW 244 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCGGGCHHHH
T ss_pred HCCCHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 999999999999999985 564 44444
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.02 E-value=4.7e-10 Score=108.11 Aligned_cols=104 Identities=13% Similarity=0.055 Sum_probs=91.6
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc-----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----- 471 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 471 (512)
.+..+...|.++.. |+|++|+.+|++|+++.+.. ...++.++|.+|..+|+|++|+..|++++++.|++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhH
Confidence 46778899999988 99999999999999886541 15789999999999999999999999999987654
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 472 -STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 472 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
..+++.+|.++..+|++++|+..|++++ ++|....
T Consensus 194 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 194 CYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 3588999999999999999999999999 9997654
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.02 E-value=5.7e-10 Score=91.44 Aligned_cols=71 Identities=15% Similarity=-0.010 Sum_probs=67.8
Q ss_pred HHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 439 TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
..++.+|.+++..|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999987765
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.01 E-value=9e-10 Score=93.94 Aligned_cols=99 Identities=11% Similarity=0.056 Sum_probs=46.1
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW------ 471 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------ 471 (512)
+..+...|..++..|+|++|+..|++++++.+.. ...++.++|.+|..+|++++|+..+++++++.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 3344444555555555555555555554442220 01244445555555555555555555554443322
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhc
Q 010340 472 STAFYMQAVALAKLDMHKDAADMLKEAASL 501 (512)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 501 (512)
..+++++|.++..+|++++|+..|++++++
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 334445555555555555555555555444
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.3e-09 Score=104.25 Aligned_cols=103 Identities=13% Similarity=0.138 Sum_probs=89.5
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHh---cCCCC---ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCC-----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFID---VGTMV---SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD----- 470 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~---~~~~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~----- 470 (512)
.+..+...|..++..|+|++|+.+|++|++ ..+.. ...+++++|.+|..+|+|++|+..+++++++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~ 233 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHH
Confidence 366889999999999999999999999994 44441 1268999999999999999999999999988743
Q ss_pred -cHHHHHHHHHHHHHcCChHHH-HHHHHHHHhchhh
Q 010340 471 -WSTAFYMQAVALAKLDMHKDA-ADMLKEAASLEEK 504 (512)
Q Consensus 471 -~~~~~~~~g~~~~~~~~~~~A-~~~~~~al~l~p~ 504 (512)
.+.+|+++|.+|..+|++++| ..+|++|+.+...
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~ 269 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 278999999999999999999 7889999988654
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=2.1e-09 Score=103.88 Aligned_cols=111 Identities=9% Similarity=-0.006 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhHHHhhh-cHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhc-C-ChHHHHHHHHHHHhhCCCcHHHH
Q 010340 399 QMRDMLEARKRGDVAFREK-EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC-D-QPDAALRDAMQAQCVYPDWSTAF 475 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~al~~~p~~~~~~ 475 (512)
..+....++.++.++...| ++++++..++++|..+|. +..+|+.|+.++..+ + +++++++.++++++++|.+..+|
T Consensus 84 nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW 162 (349)
T 3q7a_A 84 NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTW 162 (349)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHH
T ss_pred CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHH
Confidence 3355788999999999999 599999999999999999 999999999999998 8 99999999999999999999999
Q ss_pred HHHHHHHHHcCChH--------HHHHHHHHHHhchhhhhhcCC
Q 010340 476 YMQAVALAKLDMHK--------DAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 476 ~~~g~~~~~~~~~~--------~A~~~~~~al~l~p~~~~~~~ 510 (512)
+.++.++..++.++ ++++.++++++++|.|..||.
T Consensus 163 ~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~ 205 (349)
T 3q7a_A 163 AYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWG 205 (349)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999998 999999999999999999985
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=6.3e-10 Score=94.17 Aligned_cols=71 Identities=15% Similarity=0.047 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhHHHhhhcH----------HHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcC-----------ChHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEF----------KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-----------QPDAALR 459 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~----------~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~-----------~~~~A~~ 459 (512)
.+++.|...|.++.+.+++ ++|+..|++||+++|+ ..++|+++|.+|..+| ++++|+.
T Consensus 34 ~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~ 112 (158)
T 1zu2_A 34 LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ 112 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH
Confidence 5688999999999998876 5999999999999999 9999999999999885 8999999
Q ss_pred HHHHHHhhCCCcH
Q 010340 460 DAMQAQCVYPDWS 472 (512)
Q Consensus 460 ~~~~al~~~p~~~ 472 (512)
+|++|++++|++.
T Consensus 113 ~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 113 FFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHCTTCH
T ss_pred HHHHHHHhCCCCH
Confidence 9999999999985
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=9.7e-10 Score=104.99 Aligned_cols=104 Identities=8% Similarity=0.015 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc--------CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhh----
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV--------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV---- 467 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~--------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 467 (512)
...+..+...|.+++..|++++|+..|+++++. .|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 345777889999999999999999999999987 555 6788999999999999999999999999984
Q ss_pred ---------------------------------------------CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhch
Q 010340 468 ---------------------------------------------YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502 (512)
Q Consensus 468 ---------------------------------------------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 502 (512)
.|..+.+++.+|.+|..+|++++|+..|++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999998
Q ss_pred hh
Q 010340 503 EK 504 (512)
Q Consensus 503 p~ 504 (512)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 75
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.00 E-value=3.7e-09 Score=100.95 Aligned_cols=102 Identities=7% Similarity=-0.072 Sum_probs=88.5
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----ChHHHhhhHHHhhhcCChHHHHHHHHHHH---hhCCCc---
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQ---CVYPDW--- 471 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al---~~~p~~--- 471 (512)
...++..|..+...|+|++|+..|++|++..+.. ...+|+++|.+|..+|+|++|+..|++|+ +..|++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 4456678888999999999999999999865441 15689999999999999999999999999 556654
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 472 -STAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 472 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
..+++++|.+|..+|+|++|+..|++|+++.++
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 379999999999999999999999999999865
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.00 E-value=7e-10 Score=106.88 Aligned_cols=104 Identities=13% Similarity=0.021 Sum_probs=92.5
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCC-----CChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc-----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTM-----VSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----- 471 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 471 (512)
.+..+...|.++.+.|+|++|+.+|++|+++.+. ....++.++|.+|.. |++++|+.+|++|+++.|..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~ 153 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQ 153 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhH
Confidence 3678889999999999999999999999987432 125689999999999 99999999999999998754
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 472 -STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 472 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
..+++++|.+|..+|+|++|+..|++++++.|++.
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999988754
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.00 E-value=9.1e-10 Score=87.73 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=71.7
Q ss_pred CCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh--hhhcC
Q 010340 433 GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK--RQRSG 509 (512)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~--~~~~~ 509 (512)
+|. +..+++++|.++...|++++|+..++++++++|++..+++.+|.++..+|++++|+..|+++++++|+ +..+|
T Consensus 2 ~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 2 VDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 566 88999999999999999999999999999999999999999999999999999999999999999998 66544
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=114.77 Aligned_cols=102 Identities=12% Similarity=-0.060 Sum_probs=80.3
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+...+..+|..+.+.|++++|++.|+++++..|. +..+|+.++.+|.+.|++++|++.|+++++++|+++.+|+.+|.+
T Consensus 406 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 484 (597)
T 2xpi_A 406 FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVV 484 (597)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3566777777788888888888888888877777 777778888888888888888888888888888888888888888
Q ss_pred HHHcCChHHHHHHHHHHHhchhh
Q 010340 482 LAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
+...|++++|+..|++++++.|+
T Consensus 485 ~~~~g~~~~A~~~~~~~~~~~~~ 507 (597)
T 2xpi_A 485 AFNKSDMQTAINHFQNALLLVKK 507 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhhhc
Confidence 88888888888888888877654
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=104.05 Aligned_cols=104 Identities=6% Similarity=-0.132 Sum_probs=88.6
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC-----hHHHhhhHHHhhhcCChHHHHHHHHHHHh-------hCCC
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS-----PTVYARRSLCHLMCDQPDAALRDAMQAQC-------VYPD 470 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~-------~~p~ 470 (512)
+..+...|..++..++|++|+.+|++|+++.+... ..++.++|.+|..+|+|++|+.+|++|++ ..+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 34455689999999999999999999998644311 34799999999999999999999999994 2334
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 471 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 471 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
...+++++|.+|..+|+|++|+..|++|+++.++..
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999988753
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.9e-09 Score=106.60 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
...+..+..+|.++++.|+|++|+..|++||+++|. +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++
T Consensus 270 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~ 348 (370)
T 1ihg_A 270 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELL 348 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 345788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHH
Q 010340 480 VALAKLDMHKDAADM 494 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~ 494 (512)
.++..++++++|...
T Consensus 349 ~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 349 KVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988654
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.99 E-value=7.7e-10 Score=86.75 Aligned_cols=69 Identities=16% Similarity=0.079 Sum_probs=65.7
Q ss_pred HhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHH-HHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 441 YARRSLCHLMCDQPDAALRDAMQAQCVYPDWST-AFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 441 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.+++|.+++..|++++|+..|+++++++|+++. +|+.+|.++..+|++++|+..|+++++++|++..++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 467899999999999999999999999999999 999999999999999999999999999999987764
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.9e-09 Score=107.01 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----ChHHHhhhHHHhhhcCChHHHHHHHHHHHh-----hC-C
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQC-----VY-P 469 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~-p 469 (512)
..+..+...|.++...|+|++|+..|++|+++.+.. ...++.++|.+|..+|++++|+.++++|++ .+ |
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~ 261 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILP 261 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccch
Confidence 346788999999999999999999999999875431 235899999999999999999999999999 56 8
Q ss_pred CcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 470 DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 470 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
..+.+++++|.++..+|++++|+..|++|+++.++
T Consensus 262 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 262 SLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999665
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.2e-09 Score=104.39 Aligned_cols=101 Identities=9% Similarity=-0.024 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcC--------CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhC---
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVG--------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY--- 468 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--- 468 (512)
...+..+...|..++..|++++|+..|++++++. +. ...+++++|.+|..+|++++|+..+++++++.
T Consensus 66 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 144 (311)
T 3nf1_A 66 PDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 144 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHh
Confidence 4457788999999999999999999999999872 33 67889999999999999999999999999884
Q ss_pred -----CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhc
Q 010340 469 -----PDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 501 (512)
Q Consensus 469 -----p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 501 (512)
|....+++.+|.++..+|++++|+..|++++++
T Consensus 145 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 145 LGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777899999999999999999999999999998
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-09 Score=85.95 Aligned_cols=72 Identities=13% Similarity=0.082 Sum_probs=67.1
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWST 473 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 473 (512)
.++..++.+|.++++.|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|++++++.|...+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 45778999999999999999999999999999999 9999999999999999999999999999999876543
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=4.4e-09 Score=99.07 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHhHHHh----hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCc
Q 010340 400 MRDMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDW 471 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~ 471 (512)
..++..+..+|..+.. .+++++|+..|+++++.+ ++.+++++|.+|.. .+++++|+..|+++++++ +
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--Y 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--C
Confidence 4557788889999998 999999999999999883 68889999999999 999999999999998874 8
Q ss_pred HHHHHHHHHHHHH----cCChHHHHHHHHHHHhchhh
Q 010340 472 STAFYMQAVALAK----LDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 472 ~~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~ 504 (512)
+.+++++|.+|.. .+++++|+..|++++++++.
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDG 146 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcH
Confidence 8999999999999 99999999999999988753
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.9e-09 Score=112.50 Aligned_cols=101 Identities=12% Similarity=0.032 Sum_probs=92.1
Q ss_pred HHhHHHhhhcH-HHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCC----------hHHHHHHHHHHHhhCCCcHHHHHH
Q 010340 409 RGDVAFREKEF-KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ----------PDAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 409 ~g~~~~~~~~~-~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
......+.|+| ++|++.++++|+++|. ++.+|+.|+.++..+|+ +++|++.++++++.+|++..+|+.
T Consensus 34 ~~~~~~~~~~~~eeal~~~~~~l~~nP~-~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~h 112 (567)
T 1dce_A 34 AVFQKRQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHH 112 (567)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHCch-hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 33344455554 6789999999999999 99999999999999999 999999999999999999999999
Q ss_pred HHHHHHHcC--ChHHHHHHHHHHHhchhhhhhcCC
Q 010340 478 QAVALAKLD--MHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 478 ~g~~~~~~~--~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
++.++..++ ++++|++.+++++++||+|..||.
T Consensus 113 R~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~ 147 (567)
T 1dce_A 113 RCWLLSRLPEPNWARELELCARFLEADERNFHCWD 147 (567)
T ss_dssp HHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHcccccHHHHHHHHHHHHhhccccccHHH
Confidence 999999999 679999999999999999999984
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.7e-09 Score=101.10 Aligned_cols=107 Identities=9% Similarity=-0.052 Sum_probs=93.1
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC-hHHHhhhHHHhhhcCChHHHHHHHHHHHhhC--CC-cHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS-PTVYARRSLCHLMCDQPDAALRDAMQAQCVY--PD-WSTAFY 476 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~-~~~~~~ 476 (512)
.+. ..+.+|..+++.++|++|+..|++++...+... ..+++++|.++..+|++++|+..|++++.-. |. .+++++
T Consensus 134 ~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~ 212 (282)
T 4f3v_A 134 EHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAW 212 (282)
T ss_dssp HHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHH
T ss_pred chH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 334 778999999999999999999999888732201 4589999999999999999999999998655 66 778999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 477 MQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 477 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++|.++..+|+.++|+..|++++..+|+ ..++
T Consensus 213 ~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 213 YLAMARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 9999999999999999999999999998 5543
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=90.30 Aligned_cols=77 Identities=12% Similarity=0.027 Sum_probs=71.8
Q ss_pred cCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 432 VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.++. .+..|+++|.+++..|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+..|+++++++|++..+|
T Consensus 4 ~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 4 MKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp --CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred Cccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHH
Confidence 4455 7899999999999999999999999999999999999999999999999999999999999999999987665
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.3e-09 Score=107.14 Aligned_cols=102 Identities=13% Similarity=0.094 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh----HHHhhhHHHhhhcCChHHHHHHHHHHHhh------CCC
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP----TVYARRSLCHLMCDQPDAALRDAMQAQCV------YPD 470 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~ 470 (512)
..+..+..+|..++..|+|++|+..|+++++.+|. +. .+|+++|.+|..+|++++|+..+++++++ .|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 45778889999999999999999999999999888 65 58999999999999999999999999998 688
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHhchh
Q 010340 471 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 503 (512)
Q Consensus 471 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 503 (512)
...+++.+|.+|..+|++++|+..|++++++.+
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999944
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2e-09 Score=103.47 Aligned_cols=111 Identities=9% Similarity=0.059 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHhHHHhhh--cHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCC-hHHHHHHHHHHHhhCCCcHHHH
Q 010340 399 QMRDMLEARKRGDVAFREK--EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ-PDAALRDAMQAQCVYPDWSTAF 475 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~--~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~ 475 (512)
..++...++.++.++...+ +|++++.+++++++.+|. +..+|..++.+...+|. +++++++++++|+.+|.+..||
T Consensus 104 ~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW 182 (331)
T 3dss_A 104 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 182 (331)
T ss_dssp CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHH
Confidence 3355778888899988888 499999999999999999 99999999999999999 6999999999999999999999
Q ss_pred HHHHHHHHHc--------------CChHHHHHHHHHHHhchhhhhhcCC
Q 010340 476 YMQAVALAKL--------------DMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 476 ~~~g~~~~~~--------------~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
++++.++..+ +.++++++++.+++.++|+|..+|.
T Consensus 183 ~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 183 HYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp HHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999998 5699999999999999999999983
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.1e-09 Score=102.70 Aligned_cols=108 Identities=8% Similarity=-0.053 Sum_probs=98.8
Q ss_pred HHHHHHHHHhHH----Hhh---hcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChH--HHHHHHHHHHhhCCCcH
Q 010340 402 DMLEARKRGDVA----FRE---KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPD--AALRDAMQAQCVYPDWS 472 (512)
Q Consensus 402 ~~~~~~~~g~~~----~~~---~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~al~~~p~~~ 472 (512)
....++.++.++ ... +++++++.+++++++.+|. +..+|+.++.++..+|+++ ++++.++++|+++|.+.
T Consensus 102 ~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~ 180 (306)
T 3dra_A 102 NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN 180 (306)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH
Confidence 345566666666 555 7899999999999999999 9999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHcCC------hHHHHHHHHHHHhchhhhhhcCC
Q 010340 473 TAFYMQAVALAKLDM------HKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 473 ~~~~~~g~~~~~~~~------~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
.||..++.++..+++ ++++++++++++.++|.|..+|.
T Consensus 181 sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~ 224 (306)
T 3dra_A 181 SAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWN 224 (306)
T ss_dssp HHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHH
Confidence 999999999999998 99999999999999999999984
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.2e-09 Score=95.83 Aligned_cols=104 Identities=10% Similarity=-0.013 Sum_probs=64.6
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc---CCC---CChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV---GTM---VSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---- 471 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~---~~~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---- 471 (512)
.+..+...|..+...|++++|+..|++++++ .++ ....++.++|.++..+|++++|+..+++++++.+..
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 144 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQV 144 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchH
Confidence 3555666677777777777777777777665 221 124456667777777777777777777766553221
Q ss_pred --HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 472 --STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 472 --~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
..++..+|.++..+|++++|+..|++++++-.+.
T Consensus 145 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 180 (203)
T 3gw4_A 145 AIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL 180 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 2344666777777777777777777776665443
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.94 E-value=4.1e-09 Score=101.39 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=95.1
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC----hHHHhhhHHHhhhcCChHHHHHHHHHHHhh------CCCc
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS----PTVYARRSLCHLMCDQPDAALRDAMQAQCV------YPDW 471 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~ 471 (512)
....+...|..++..|+|++|+..|+++++.+|. + ..++..+|.+|...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3567889999999999999999999999999888 5 478999999999999999999999999988 5667
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 472 STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
..+++.+|.++..+|++++|+..|++++++.++.
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999998864
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.5e-09 Score=91.13 Aligned_cols=102 Identities=12% Similarity=0.119 Sum_probs=89.4
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCC------Cc
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYP------DW 471 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p------~~ 471 (512)
+..+...|..++..|++++|+..|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+ ..
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 128 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGE 128 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhH
Confidence 4578889999999999999999999999874431 256899999999999999999999999998743 33
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 472 STAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
..+++.+|.++..+|++++|+..|++++++..+
T Consensus 129 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 129 GRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999988654
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=4.9e-09 Score=100.82 Aligned_cols=109 Identities=8% Similarity=-0.079 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhHHHhhhc----------HHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCC--hHHHHHHHHHHHhhC
Q 010340 401 RDMLEARKRGDVAFREKE----------FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ--PDAALRDAMQAQCVY 468 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~----------~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~~~ 468 (512)
+....++.++.++...++ +++++.+++.++..+|. ++.+|+.++.++..+++ +++++..++++++++
T Consensus 62 ~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~d 140 (331)
T 3dss_A 62 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEAD 140 (331)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhC
Confidence 345667777777766665 79999999999999999 99999999999999994 899999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCC-hHHHHHHHHHHHhchhhhhhcCC
Q 010340 469 PDWSTAFYMQAVALAKLDM-HKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 469 p~~~~~~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
|.+..+|..++.++..+|. ++++++++.++++++|.|..||.
T Consensus 141 prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 141 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 9999999999999999999 69999999999999999999985
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=4.5e-09 Score=100.15 Aligned_cols=95 Identities=8% Similarity=-0.066 Sum_probs=89.2
Q ss_pred HHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc--HHHHHHHHHHH
Q 010340 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--STAFYMQAVAL 482 (512)
Q Consensus 405 ~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~ 482 (512)
.....+..+.+.+++++|+..|+++++.+|. +..+++++|.+|...|++++|+..|.++++.+|++ ..++.++|.++
T Consensus 187 ~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~ 265 (287)
T 3qou_A 187 QGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEIL 265 (287)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHH
Confidence 4455666788889999999999999999999 99999999999999999999999999999999999 99999999999
Q ss_pred HHcCChHHHHHHHHHHHh
Q 010340 483 AKLDMHKDAADMLKEAAS 500 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~ 500 (512)
..+|+.++|+..|++++.
T Consensus 266 ~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 266 AALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHCTTCHHHHHHHHHHH
T ss_pred HHcCCCCcHHHHHHHHHH
Confidence 999999999999999985
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.9e-09 Score=104.16 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=94.6
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC----hHHHhhhHHHhhhcCChHHHHHHHHHHHhh------CCCcH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS----PTVYARRSLCHLMCDQPDAALRDAMQAQCV------YPDWS 472 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~ 472 (512)
+..+..+|..++..|+|++|+..|+++++..|. + ..++..+|.+|...|++++|+..+++++++ .|...
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 567889999999999999999999999999888 5 468999999999999999999999999988 56678
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 473 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
.+++.+|.++..+|++++|+..|++++++.|+.
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999998875
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.7e-09 Score=104.85 Aligned_cols=104 Identities=10% Similarity=-0.012 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCC-----CCChHHHhhhHHHhhhcCChHHHHHHHHHHHh-----hCCC
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGT-----MVSPTVYARRSLCHLMCDQPDAALRDAMQAQC-----VYPD 470 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~p~ 470 (512)
..+..+...|.++...|+|++|+..|++|+++.+ .....++.++|.+|..+|++++|+..++++++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 3577888999999999999999999999998632 11356899999999999999999999999999 8898
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 471 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 471 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
.+.+++++|.++..+|++++|+..|++++++.++
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998654
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=1e-08 Score=86.19 Aligned_cols=81 Identities=15% Similarity=0.053 Sum_probs=76.4
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
...+..+|..++..|+|++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 778899999999999999999999999999998 8999999999999999999999999999999999999999888775
Q ss_pred HH
Q 010340 483 AK 484 (512)
Q Consensus 483 ~~ 484 (512)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 44
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.5e-09 Score=104.32 Aligned_cols=106 Identities=13% Similarity=0.001 Sum_probs=72.0
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC------ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH--
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV------SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS-- 472 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-- 472 (512)
..+..+...|..++..|++++|+.+|++|+++.+.. ...++.++|.+|..+|++++|+..+++|+++.+...
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 220 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQP 220 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCCh
Confidence 346667777777777777777777777777653321 234677777777777777777777777776654332
Q ss_pred ----HHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 473 ----TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 473 ----~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
.+++++|.+|..+|++++|+.+|++|+++.++..
T Consensus 221 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~ 258 (383)
T 3ulq_A 221 QLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESN 258 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Confidence 4777777777777777777777777777655543
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.89 E-value=1.2e-09 Score=103.75 Aligned_cols=104 Identities=9% Similarity=-0.012 Sum_probs=89.2
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH-----HHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS-----TAF 475 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~ 475 (512)
.++..+..+|.++++.|+|++|+..|++|++++|. +..+++++|.+|..+|++++|+..|+++++++|++. .++
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~ 114 (281)
T 2c2l_A 36 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIP 114 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHH
Confidence 35788999999999999999999999999999999 999999999999999999999999999999998762 111
Q ss_pred H--------------------------HHHHHHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 476 Y--------------------------MQAVALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 476 ~--------------------------~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
. .++. +..|++++|++.|++|++++|++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~~~ 170 (281)
T 2c2l_A 115 SALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDDGH 170 (281)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccchhh
Confidence 1 1122 2368999999999999999997654
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=8.1e-09 Score=99.73 Aligned_cols=97 Identities=10% Similarity=0.037 Sum_probs=90.6
Q ss_pred HHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcC-ChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHc-C-ChH
Q 010340 413 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-QPDAALRDAMQAQCVYPDWSTAFYMQAVALAKL-D-MHK 489 (512)
Q Consensus 413 ~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~-~-~~~ 489 (512)
..+.+..++|++.++++|+++|. +..+|+.|+.++..+| .+++++..++++|+.+|++..+|+.++.++..+ + +++
T Consensus 64 ~~~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~ 142 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPV 142 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCH
T ss_pred HHhCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChH
Confidence 34445568999999999999999 9999999999999999 599999999999999999999999999999999 8 999
Q ss_pred HHHHHHHHHHhchhhhhhcCC
Q 010340 490 DAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 490 ~A~~~~~~al~l~p~~~~~~~ 510 (512)
++++.++++|+++|+|..+|.
T Consensus 143 ~EL~~~~k~L~~dpkNy~AW~ 163 (349)
T 3q7a_A 143 SEIEYIHGSLLPDPKNYHTWA 163 (349)
T ss_dssp HHHHHHHHHTSSCTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999884
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.88 E-value=7.7e-09 Score=97.37 Aligned_cols=102 Identities=15% Similarity=0.046 Sum_probs=92.0
Q ss_pred HHHHHHHHHhHHHh----hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCcHH
Q 010340 402 DMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWST 473 (512)
Q Consensus 402 ~~~~~~~~g~~~~~----~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 473 (512)
++..+...|..+.. .+++++|+..|+++++.+ +..+++++|.+|.. .+++++|+..++++++..| +.
T Consensus 145 ~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~ 219 (273)
T 1ouv_A 145 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GG 219 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HH
T ss_pred cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HH
Confidence 46678888999988 999999999999999883 57899999999999 9999999999999999976 88
Q ss_pred HHHHHHHHHHH----cCChHHHHHHHHHHHhchhhhhhc
Q 010340 474 AFYMQAVALAK----LDMHKDAADMLKEAASLEEKRQRS 508 (512)
Q Consensus 474 ~~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~~~~~ 508 (512)
+++.+|.+|.. .+++++|+.+|++|++++|++...
T Consensus 220 a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~ 258 (273)
T 1ouv_A 220 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 258 (273)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHHH
Confidence 99999999999 999999999999999999986543
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=8e-09 Score=93.60 Aligned_cols=96 Identities=13% Similarity=0.016 Sum_probs=59.0
Q ss_pred HHHHHHHHHhHHHhhh----cHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCC--Cc
Q 010340 402 DMLEARKRGDVAFREK----EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYP--DW 471 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~----~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p--~~ 471 (512)
++..++.+|..+.. + ++++|+.+|++|++. . ++.+++++|.+|.. .+++++|+..|+++++..| ++
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~ 124 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--G-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAA 124 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcch
Confidence 35555666666555 4 566666666666543 2 45666666666665 5666666666666666665 34
Q ss_pred HHHHHHHHHHHHH----cCChHHHHHHHHHHHhc
Q 010340 472 STAFYMQAVALAK----LDMHKDAADMLKEAASL 501 (512)
Q Consensus 472 ~~~~~~~g~~~~~----~~~~~~A~~~~~~al~l 501 (512)
+.+++++|.+|.. .+++++|+.+|++|+++
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 6666666666666 66666666666666655
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.87 E-value=4.7e-09 Score=107.04 Aligned_cols=104 Identities=13% Similarity=0.002 Sum_probs=86.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhc-------------------CChHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC-------------------DQPDAALRDAM 462 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~A~~~~~ 462 (512)
.+..+...|..+...|++++|+..|++|++..|. +..+|+++|.+|... +.+++|+..++
T Consensus 246 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 324 (472)
T 4g1t_A 246 VTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLK 324 (472)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4667888899999999999999999999999888 888888888887543 34677888888
Q ss_pred HHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 463 QAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 463 ~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
++++++|.+..+++.+|.++..+|++++|+..|+++|+++|++.
T Consensus 325 ~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 325 KADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred HHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 88888888888888888888888888888888888888776543
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.7e-08 Score=81.75 Aligned_cols=84 Identities=12% Similarity=0.121 Sum_probs=79.1
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+...+...|..++..|++++|+..|+++++..|. +..+++++|.+|..+|++++|+..++++++++|++..++..+|.+
T Consensus 42 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 120 (125)
T 1na0_A 42 NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 120 (125)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3667888999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHHcC
Q 010340 482 LAKLD 486 (512)
Q Consensus 482 ~~~~~ 486 (512)
+..+|
T Consensus 121 ~~~~g 125 (125)
T 1na0_A 121 KQKQG 125 (125)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 88765
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.3e-08 Score=78.64 Aligned_cols=71 Identities=14% Similarity=-0.019 Sum_probs=65.9
Q ss_pred CCCCChHHHhhhHHHhhhcCC---hHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 433 GTMVSPTVYARRSLCHLMCDQ---PDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
+|. +++++..+|.+++..++ .++|...+++|++++|+++.+++.+|.++++.|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 466 89999999999976665 799999999999999999999999999999999999999999999999998
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.83 E-value=2.2e-08 Score=80.21 Aligned_cols=81 Identities=10% Similarity=-0.011 Sum_probs=76.5
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
+...+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.++..++.+
T Consensus 37 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 37 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 4678899999999999999999999999999998 999999999999999999999999999999999999999999887
Q ss_pred HH
Q 010340 482 LA 483 (512)
Q Consensus 482 ~~ 483 (512)
..
T Consensus 116 ~~ 117 (118)
T 1elw_A 116 EA 117 (118)
T ss_dssp HH
T ss_pred hc
Confidence 53
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.4e-08 Score=103.52 Aligned_cols=108 Identities=10% Similarity=-0.025 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc-----CCCC--ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhC
Q 010340 396 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTMV--SPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 468 (512)
Q Consensus 396 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~-----~~~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 468 (512)
+...++.+..+.+++..+..+|+|++|+..|++++++ .++. -..++.|+|.+|..+|+|++|+..++++|++.
T Consensus 302 v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 302 VKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGY 381 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 3344556777888888899999999999999999975 3330 24679999999999999999999999999765
Q ss_pred --------CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchh
Q 010340 469 --------PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 503 (512)
Q Consensus 469 --------p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 503 (512)
|+-+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 382 ~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 382 MKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 44477899999999999999999999999998643
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.1e-08 Score=101.57 Aligned_cols=101 Identities=11% Similarity=0.053 Sum_probs=64.4
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh------HHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc-----
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP------TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----- 471 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----- 471 (512)
+..+...|..++..|+|++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|..
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 265 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 265 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchH
Confidence 445666666666666666666666666655433 22 256666666666666666666666666665554
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 472 -STAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 472 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
..+++.+|.++..+|++++|+..|++++++.++
T Consensus 266 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 266 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Confidence 556666666666666666666666666666554
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.3e-08 Score=90.71 Aligned_cols=102 Identities=15% Similarity=0.061 Sum_probs=93.6
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHh------cCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhh---CC---
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFID------VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV---YP--- 469 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~------~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~p--- 469 (512)
.+..+...|..++..|+|++|+..|+++++ ..+. ...++.++|.+|..+|++++|+..+++++++ .+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 467889999999999999999999999998 7888 8999999999999999999999999999998 33
Q ss_pred -CcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 470 -DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 470 -~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
....+++++|.++..+|++++|+..|++++++.+.
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999988654
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.80 E-value=9.9e-09 Score=102.50 Aligned_cols=100 Identities=9% Similarity=0.121 Sum_probs=51.2
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh------HHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc------
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP------TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW------ 471 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------ 471 (512)
..+...|..++..|+|++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.+..
T Consensus 224 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 302 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVE 302 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34445555555555555555555555554332 11 145555555555555555555555555554432
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 472 STAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
..+++.+|.++..+|++++|+..|++++++.++
T Consensus 303 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 303 AQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555555555555443
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-08 Score=81.90 Aligned_cols=81 Identities=11% Similarity=0.008 Sum_probs=70.2
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH--HHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS--TAFYMQA 479 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~g 479 (512)
++..++.+|..++..|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|+.. .+...+.
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~ 96 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQ 96 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence 4678899999999999999999999999999999 999999999999999999999999999999998654 3333433
Q ss_pred HHHH
Q 010340 480 VALA 483 (512)
Q Consensus 480 ~~~~ 483 (512)
..+.
T Consensus 97 ~~l~ 100 (115)
T 2kat_A 97 VFLR 100 (115)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.79 E-value=3.2e-08 Score=78.43 Aligned_cols=77 Identities=16% Similarity=0.010 Sum_probs=69.9
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcC-------CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVG-------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 475 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~-------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 475 (512)
+...+..|..+++.|+|..|+..|++|++.. .. ...++.++|.||.++|++++|+..++++++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5677899999999999999999999999863 22 578999999999999999999999999999999999998
Q ss_pred HHHHH
Q 010340 476 YMQAV 480 (512)
Q Consensus 476 ~~~g~ 480 (512)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88873
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.6e-08 Score=90.18 Aligned_cols=104 Identities=8% Similarity=-0.084 Sum_probs=92.6
Q ss_pred HHHHHHHHHHhHHHh----hhcHHHHHHHHHHHHhcCCC-CChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCc
Q 010340 401 RDMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTM-VSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDW 471 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~al~~~~~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~ 471 (512)
.++..++.+|..++. .+++++|+.+|++|++.++. ..+.+++++|.+|.. .+++++|+..|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 457788999999988 89999999999999999773 148999999999999 89999999999999999 788
Q ss_pred HHHHHHHHHHHHHc-C-----ChHHHHHHHHHHHhchhhh
Q 010340 472 STAFYMQAVALAKL-D-----MHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 472 ~~~~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~p~~ 505 (512)
+.+++++|.+|... | ++++|+.+|++|++.....
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~ 201 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDT 201 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHH
Confidence 89999999999865 3 8999999999999886543
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.7e-08 Score=80.22 Aligned_cols=83 Identities=12% Similarity=0.026 Sum_probs=74.1
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
..++..|.++++.|+|++|+..|+++++..|. + ..+++++|.+|..+|++++|+..++++++.+|++..+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 67889999999999999999999999999998 7 8889999999999999999999999999999999888777666
Q ss_pred HHHHcCC
Q 010340 481 ALAKLDM 487 (512)
Q Consensus 481 ~~~~~~~ 487 (512)
+....++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5554443
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.2e-08 Score=99.23 Aligned_cols=101 Identities=13% Similarity=-0.034 Sum_probs=48.5
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC------ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCC------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV------SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD------ 470 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~------ 470 (512)
+..+...|..++..|++++|+..|++|+++.+.. ...++.++|.+|..+|++++|++.+++|+++.+.
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 4444455555555555555555555555432210 1234445555555555555555555555544221
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHhchh
Q 010340 471 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 503 (512)
Q Consensus 471 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 503 (512)
...+++++|.+|..+|++++|+..|++|+++..
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 133455555555555555555555555554433
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.75 E-value=2e-08 Score=96.54 Aligned_cols=102 Identities=11% Similarity=0.065 Sum_probs=57.3
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW------ 471 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------ 471 (512)
+..+...|..++..|++++|+..|++++++.+.. ...++.++|.+|..+|++++|+..+++++++.+..
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 262 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 262 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHH
Confidence 3445555666666666666666666665543220 12255566666666666666666666665555443
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 472 STAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
..+++.+|.++..+|++++|+..|++++++.+.
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 455556666666666666666666666655544
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=3.4e-08 Score=99.07 Aligned_cols=98 Identities=11% Similarity=0.007 Sum_probs=82.1
Q ss_pred HHHHHHhHHHhhhcHHHHHHHHHHHHhc-----CCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhC--------
Q 010340 405 EARKRGDVAFREKEFKTAVDCYSQFIDV-----GTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVY-------- 468 (512)
Q Consensus 405 ~~~~~g~~~~~~~~~~~Ai~~~~~al~~-----~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-------- 468 (512)
...+.+......|+|++|+..|++++++ .|+ + ...+.|+|.+|..+|+|++|+..+++++++.
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H 378 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYS 378 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3344444555678999999999999974 344 4 4679999999999999999999999999764
Q ss_pred CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchh
Q 010340 469 PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 503 (512)
Q Consensus 469 p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 503 (512)
|+-+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 379 p~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 379 LNVASMWLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 45577899999999999999999999999998753
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.5e-07 Score=90.65 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=62.6
Q ss_pred hcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 431 DVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
..+|. .+.+|..++.++...|++++|+..+++|++++|+ ..+|..+|.++...|++++|++.|++|+.++|...
T Consensus 271 ~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 271 PELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp GGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred ccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 33444 5555555666666789999999999999999975 67889999999999999999999999999999754
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.67 E-value=1.6e-07 Score=78.71 Aligned_cols=92 Identities=10% Similarity=-0.070 Sum_probs=85.2
Q ss_pred HHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 010340 409 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 484 (512)
Q Consensus 409 ~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 484 (512)
.|..+...+.+++|+.+|++|.+. . ++.+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 788888889999999999999998 3 78999999999999 89999999999999987 689999999999999
Q ss_pred ----cCChHHHHHHHHHHHhchhhh
Q 010340 485 ----LDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 485 ----~~~~~~A~~~~~~al~l~p~~ 505 (512)
.+++++|+.+|++|.++....
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~~ 130 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSED 130 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCHH
Confidence 999999999999999886543
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.64 E-value=5.8e-08 Score=79.34 Aligned_cols=69 Identities=13% Similarity=0.000 Sum_probs=66.5
Q ss_pred ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 437 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
.+..++.+|.++...|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 467899999999999999999999999999999999999999999999999999999999999999976
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=2e-07 Score=93.69 Aligned_cols=99 Identities=12% Similarity=0.034 Sum_probs=84.0
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcC-----CCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhC------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVG-----TMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVY------ 468 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~-----~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------ 468 (512)
+.........+.++|+|++|+..|++++++. ++ + ..++.++|.+|..+|+|++|+..+++++++.
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~ 365 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG 365 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC
Confidence 4455555666778999999999999999753 33 3 4679999999999999999999999999664
Q ss_pred --CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhch
Q 010340 469 --PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502 (512)
Q Consensus 469 --p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 502 (512)
|+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 366 ~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 366 SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 4446789999999999999999999999999864
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=1.2e-07 Score=89.22 Aligned_cols=125 Identities=16% Similarity=0.068 Sum_probs=88.7
Q ss_pred eEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhh
Q 010340 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH 163 (512)
Q Consensus 85 ~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~ 163 (512)
.||+..... .+..+.||+-... ....+.+|...|+.+ .+--|.++++++.+.+..++|||+++|.++.+....
T Consensus 40 ~v~rl~~~~---~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~ 113 (272)
T 4gkh_A 40 TIYRLYGKP---NAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE 113 (272)
T ss_dssp EEEEEECCT---TCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH
T ss_pred eEEEEEecC---CCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC
Confidence 689887665 4556899986543 245688999999888 344588999999999999999999999887765431
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------------------
Q 010340 164 WENQTIEWAMRLRVALYIAEALDYCSSE---------------------------------------------------- 191 (512)
Q Consensus 164 ~~~~~l~~~~~~~i~~~i~~~L~~LH~~---------------------------------------------------- 191 (512)
. ......+..+++..|.-||..
T Consensus 114 ~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 187 (272)
T 4gkh_A 114 Y------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLL 187 (272)
T ss_dssp C------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTC
T ss_pred C------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcc
Confidence 0 111223344444444444421
Q ss_pred ---C--CccccccCccceeecCCCCCeeecccCcc
Q 010340 192 ---G--RPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 192 ---~--~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
. .++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 188 ~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 188 PFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0 15899999999999987777799998764
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.57 E-value=2e-07 Score=96.75 Aligned_cols=100 Identities=12% Similarity=0.052 Sum_probs=74.0
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHH-hhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLC-HLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
..+...|..+.+.|++++|+..|++|++..|. ....|...+.+ +...|++++|...|+++++..|+++.+|..+|.++
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 46667777777777777777777777777665 55656555544 34577888888888888888888888888888888
Q ss_pred HHcCChHHHHHHHHHHHhchhh
Q 010340 483 AKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~ 504 (512)
..+|++++|+..|++|++..|.
T Consensus 436 ~~~g~~~~Ar~~~~~al~~~~~ 457 (530)
T 2ooe_A 436 SHLNEDNNTRVLFERVLTSGSL 457 (530)
T ss_dssp TTTTCHHHHHHHHHHHHHSCCS
T ss_pred HhCCCHhhHHHHHHHHHhccCC
Confidence 8888888888888888877544
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.57 E-value=2e-07 Score=73.80 Aligned_cols=73 Identities=12% Similarity=-0.079 Sum_probs=66.1
Q ss_pred ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhC-------CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 437 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVY-------PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++.-.+.+|..+++.|+|..|+..|++|++.. +..+..+..+|.+++++|++++|+..++++++++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 45668899999999999999999999999864 45689999999999999999999999999999999987653
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.3e-07 Score=88.44 Aligned_cols=96 Identities=14% Similarity=0.051 Sum_probs=84.6
Q ss_pred HHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc--HHHHHHHHHHH
Q 010340 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--STAFYMQAVAL 482 (512)
Q Consensus 405 ~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~ 482 (512)
.....|..+...|+|++|.+.|+.++..+|. .. +++.+|.++++.++|++|+..|+++++..+.. ..+++++|.++
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al 181 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAA 181 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHH
Confidence 3455688899999999999999999999887 66 99999999999999999999999888764222 46999999999
Q ss_pred HHcCChHHHHHHHHHHHhch
Q 010340 483 AKLDMHKDAADMLKEAASLE 502 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~ 502 (512)
..+|++++|+..|++++.-.
T Consensus 182 ~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 182 ANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHTTCHHHHHHHHHHHHTST
T ss_pred HHCCCHHHHHHHHHHHhcCC
Confidence 99999999999999998544
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.54 E-value=2.1e-07 Score=96.65 Aligned_cols=103 Identities=7% Similarity=-0.090 Sum_probs=80.3
Q ss_pred HHHHHHHHHHhHHHh-------hhcHH-------HHHHHHHHHHh-cCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFR-------EKEFK-------TAVDCYSQFID-VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQ 465 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~-------~~~~~-------~Ai~~~~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 465 (512)
..+..+...|..+.+ .|+++ +|+..|++|++ ..|. +..+|+++|..+...|++++|...|++++
T Consensus 270 ~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al 348 (530)
T 2ooe_A 270 HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLL 348 (530)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 346777778877775 67876 88888888886 6777 88888888888888888888888888888
Q ss_pred hhCCCcH-HHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 466 CVYPDWS-TAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 466 ~~~p~~~-~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
++.|+++ .+|..+|.++..+|++++|+..|++|++..|.
T Consensus 349 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 349 AIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred CccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 8888874 58888887777777777777777777776554
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.53 E-value=3.9e-07 Score=73.29 Aligned_cols=94 Identities=10% Similarity=0.046 Sum_probs=82.3
Q ss_pred hhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHH---HHHHHHHHHhhC-C-CcHHHHHHHHHHHHHcCChH
Q 010340 415 REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDA---ALRDAMQAQCVY-P-DWSTAFYMQAVALAKLDMHK 489 (512)
Q Consensus 415 ~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~~~~~~g~~~~~~~~~~ 489 (512)
.......+.+.|.+++..++. +..+-+++|.++.+..+... +|..++..++-. | ..-+..|.+|.+++++|+|+
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 344556777888888887776 89999999999999887776 999999999987 6 67899999999999999999
Q ss_pred HHHHHHHHHHhchhhhhhcC
Q 010340 490 DAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 490 ~A~~~~~~al~l~p~~~~~~ 509 (512)
+|+.+++..|+++|.|.+|.
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999998764
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.4e-07 Score=90.57 Aligned_cols=134 Identities=14% Similarity=0.035 Sum_probs=89.7
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCC---CccceEEEEe-eCCeeEEEEE
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHK---RLANLIGYCC-DGDERLLVAE 150 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~E 150 (512)
+..++.|..+.||+. . ..++||+.... .....+.+|+++|..+.+. .|.+++.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v---g-----~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV---N-----GDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE---T-----TTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE---C-----CEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 445678888899987 1 22888885321 1235789999999999642 3677777774 4556789999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-------------------------------------- 192 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 192 (512)
+++|.+|.+... ..++......++.++++.|..||+..
T Consensus 94 ~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 999988866321 12334444444444444444444321
Q ss_pred ---------------------CccccccCccceeecC---CCCC-eeecccCccc
Q 010340 193 ---------------------RPLYHDLNAYRVLFDE---NGDP-RLSCFGLMKN 222 (512)
Q Consensus 193 ---------------------~iiH~Dlkp~Nill~~---~~~~-kl~Dfg~a~~ 222 (512)
.++|+|++|.|||++. ++.+ .|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2599999999999987 4554 7999997653
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=2.2e-07 Score=91.55 Aligned_cols=102 Identities=12% Similarity=0.014 Sum_probs=87.6
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCC-------CCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCC-----c
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGT-------MVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD-----W 471 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~-------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-----~ 471 (512)
..+...|..++..|+|++|+..|++++++.+ .....++.++|.+|..+|++++|+..+++++++.+. .
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 173 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQ 173 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHH
Confidence 3367789999999999999999999998642 114567888999999999999999999999999986 3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 472 STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
..+++.+|.++...|++++|+..|++++.+.+..
T Consensus 174 ~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 174 LQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 5689999999999999999999999999886653
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.51 E-value=5.4e-07 Score=92.54 Aligned_cols=103 Identities=15% Similarity=-0.033 Sum_probs=91.7
Q ss_pred HHHHHHHHHHhHHHhhh---cHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCcHH
Q 010340 401 RDMLEARKRGDVAFREK---EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWST 473 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~---~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 473 (512)
.++..+..+|..++..| ++++|+.+|++|++. . ++.+++++|.+|.. .+++++|+..|++|++.. ++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHH
Confidence 44677888999998755 999999999999998 3 78999999999999 899999999999999864 799
Q ss_pred HHHHHHHHHHH----cCChHHHHHHHHHHHhch---hhhhhc
Q 010340 474 AFYMQAVALAK----LDMHKDAADMLKEAASLE---EKRQRS 508 (512)
Q Consensus 474 ~~~~~g~~~~~----~~~~~~A~~~~~~al~l~---p~~~~~ 508 (512)
+++++|.+|.. .+++++|+.+|++|++++ |.+..+
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a 442 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENR 442 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHH
Confidence 99999999999 899999999999999999 545544
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.50 E-value=5.2e-07 Score=88.82 Aligned_cols=99 Identities=11% Similarity=0.047 Sum_probs=60.0
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcC--------CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhC------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVG--------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY------ 468 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------ 468 (512)
+..+...|..++..|++++|+..+++++++. -- .++.++|.++..+|++++|+..+++++++.
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~ 129 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL---WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLE 129 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccc
Confidence 3455566666666666666666666666420 11 134556666666666666666666666654
Q ss_pred --CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 469 --PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 469 --p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
|....++.++|.++..+|++++|+..|++++++.+.
T Consensus 130 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 130 QLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp TSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred cCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 334456666666666666666666666666666553
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=2.2e-07 Score=91.25 Aligned_cols=85 Identities=6% Similarity=-0.024 Sum_probs=58.8
Q ss_pred cccC-CCCCCCeEEEEEEc---CCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCC-C--CCccceEEEEeeC--
Q 010340 75 VSES-GEKAPNVVYKGRLQ---DGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLR-H--KRLANLIGYCCDG-- 142 (512)
Q Consensus 75 i~~l-G~G~~g~Vy~~~~~---~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 142 (512)
+..| +.|..+.+|+.... ++..++..+++|+..... ......+.+|+.+++.+. + ..+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4566 78888999988753 100015678999876543 112356888999999883 3 4578889888765
Q ss_pred -CeeEEEEEccCCCCHHh
Q 010340 143 -DERLLVAEYMPNDTLAK 159 (512)
Q Consensus 143 -~~~~lv~E~~~~g~L~~ 159 (512)
+..++||||++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35789999999977643
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.3e-06 Score=87.18 Aligned_cols=97 Identities=16% Similarity=0.123 Sum_probs=59.2
Q ss_pred ccccCHHHHHHHhcC---CCc--ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-------CChhHHHHHH
Q 010340 54 FAEFSLADLRAATNN---FSS--DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-------PDPKQFADEA 121 (512)
Q Consensus 54 ~~~~~~~~~~~~~~~---f~~--~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~ 121 (512)
+..++.+++...... |.. ...+..+|.|.++.||++.... +++.++||....... .....+..|+
T Consensus 9 ~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~---~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~ 85 (397)
T 2olc_A 9 YETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQE---HDRALIIKQAVPYAKVVGESWPLTIDRARIES 85 (397)
T ss_dssp CCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC-------CEEEEEEECCC-------CCCCTTHHHHHH
T ss_pred cccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECC---CCcEEEEEecchhhcccCCCCcCcHHHHHHHH
Confidence 444555555544332 221 1246678999999999997654 456799998654321 1235678899
Q ss_pred HHHhcCC-C-C-CccceEEEEeeCCeeEEEEEccCCC
Q 010340 122 WGVGKLR-H-K-RLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 122 ~~l~~l~-h-~-niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
++++.+. + + .+.+++.+ +.+..++|||++++.
T Consensus 86 ~~L~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 86 SALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHL 120 (397)
T ss_dssp HHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTS
T ss_pred HHHHHhhhhCCCCcCeEEEE--cCCccEEEEEeCCCc
Confidence 9998873 2 3 34566654 345578999999874
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=7.3e-07 Score=82.46 Aligned_cols=103 Identities=12% Similarity=-0.019 Sum_probs=87.6
Q ss_pred HHHHHHHHHhHHHh-----------hhcHHHHHHHHHHHHhcCCCCC--hHHHhhhHHHhhhc-----CChHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFR-----------EKEFKTAVDCYSQFIDVGTMVS--PTVYARRSLCHLMC-----DQPDAALRDAMQ 463 (512)
Q Consensus 402 ~~~~~~~~g~~~~~-----------~~~~~~Ai~~~~~al~~~~~~~--~~~~~~~~~~~~~~-----~~~~~A~~~~~~ 463 (512)
+++.++..|..... .+....|...+++||++||. . ..+|..+|..|... |+.++|.++|++
T Consensus 151 dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~-~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fer 229 (301)
T 3u64_A 151 DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPS-YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEH 229 (301)
T ss_dssp GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCC-cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHH
Confidence 35556665555422 23468999999999999998 5 45899999999996 999999999999
Q ss_pred HHhhCCCc-HHHHHHHHHHHHHc-CChHHHHHHHHHHHhchhhh
Q 010340 464 AQCVYPDW-STAFYMQAVALAKL-DMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 464 al~~~p~~-~~~~~~~g~~~~~~-~~~~~A~~~~~~al~l~p~~ 505 (512)
|++++|+. .++++..|..++.. |++++|...+++|++.+|..
T Consensus 230 AL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 230 LTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999975 99999999999884 99999999999999999874
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.5e-06 Score=88.26 Aligned_cols=96 Identities=8% Similarity=0.015 Sum_probs=74.2
Q ss_pred HHHHHHHHhHHHhhh---cHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhc----CChHHHHHHHHHHHhhCCCcHHHH
Q 010340 403 MLEARKRGDVAFREK---EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC----DQPDAALRDAMQAQCVYPDWSTAF 475 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~---~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~al~~~p~~~~~~ 475 (512)
+..++.+|..+.+.| ++++|+..|+++++.++. ....++++|.+|... +++++|+..|+++. |.++.++
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 446777788888788 888888888888888777 777778888888765 67888888888877 7888888
Q ss_pred HHHHHH-H--HHcCChHHHHHHHHHHHhch
Q 010340 476 YMQAVA-L--AKLDMHKDAADMLKEAASLE 502 (512)
Q Consensus 476 ~~~g~~-~--~~~~~~~~A~~~~~~al~l~ 502 (512)
+++|.+ + ...+++++|+.+|+++++.+
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 888887 4 46778888888888887554
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.38 E-value=5e-07 Score=92.10 Aligned_cols=104 Identities=11% Similarity=0.044 Sum_probs=88.5
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc-----CCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhC----
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVY---- 468 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~-----~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~---- 468 (512)
.-+..+..+|.++..+|+|++|+..|+++|++ .++ + ...++|+|.+|..+|+|++|+..|++|+++.
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~l 427 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTH 427 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 34778899999999999999999999999964 344 4 4569999999999999999999999999654
Q ss_pred -CCc---HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 469 -PDW---STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 469 -p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
|++ .+...+++.++.+++.|++|...|+++.+-.-+|
T Consensus 428 G~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~ 468 (490)
T 3n71_A 428 GPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNN 468 (490)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 555 5677889999999999999999999987644333
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.37 E-value=9.5e-07 Score=73.82 Aligned_cols=83 Identities=8% Similarity=-0.009 Sum_probs=73.2
Q ss_pred HHHHHHHHHhHHHhhh---cHHHHHHHHHHHHhcC-CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHH
Q 010340 402 DMLEARKRGDVAFREK---EFKTAVDCYSQFIDVG-TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~---~~~~Ai~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
+.+..++.|..+.+.+ ++++||..++..++.+ |....+++|++|..|+++|+|++|+.+++++|+++|++.++...
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 3677888999999877 8889999999999998 63378999999999999999999999999999999999999887
Q ss_pred HHHHHHH
Q 010340 478 QAVALAK 484 (512)
Q Consensus 478 ~g~~~~~ 484 (512)
+-.+-..
T Consensus 111 k~~ie~~ 117 (152)
T 1pc2_A 111 ERLIDKA 117 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665433
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-06 Score=67.55 Aligned_cols=70 Identities=4% Similarity=-0.084 Sum_probs=64.2
Q ss_pred HHHHHHHHHhHHHhhhc---HHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH
Q 010340 402 DMLEARKRGDVAFREKE---FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 472 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~---~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 472 (512)
+++.+..+|.+++..++ .++|...+++|++++|. +..+++.+|..+++.|+|++|+..++++++.+|..+
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 57788899999975555 79999999999999999 999999999999999999999999999999999843
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.30 E-value=4e-06 Score=69.95 Aligned_cols=80 Identities=15% Similarity=0.097 Sum_probs=72.2
Q ss_pred hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH----cCChHHH
Q 010340 416 EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK----LDMHKDA 491 (512)
Q Consensus 416 ~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~----~~~~~~A 491 (512)
.+++++|+..|+++.+.... .+. +|.+|...+.+++|+..|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~---~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM---FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT---THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH---hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 46899999999999998644 344 999999999999999999999997 689999999999999 8999999
Q ss_pred HHHHHHHHhch
Q 010340 492 ADMLKEAASLE 502 (512)
Q Consensus 492 ~~~~~~al~l~ 502 (512)
+.+|++|.+..
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999999763
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.29 E-value=4.5e-06 Score=85.57 Aligned_cols=97 Identities=10% Similarity=-0.109 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhHHHh----hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCcH
Q 010340 401 RDMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWS 472 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~----~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~ 472 (512)
.++.+++.+|..++. .+++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..|+++++. .++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 557888999999998 89999999999999886 3 68889999999998 88999999999999876 588
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHHHHhch
Q 010340 473 TAFYMQAVALAK----LDMHKDAADMLKEAASLE 502 (512)
Q Consensus 473 ~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 502 (512)
.+++.+|.+|.. .+++++|+..|+++++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999998 889999999999998764
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.19 E-value=7.4e-06 Score=79.68 Aligned_cols=138 Identities=11% Similarity=0.088 Sum_probs=79.4
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCC--CCccceEE------EEeeCCeeE
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH--KRLANLIG------YCCDGDERL 146 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~ 146 (512)
+..|+.|..+.||++... ++ .+++|+... ....+..|+.++..|.. -.|.+++. +....+..+
T Consensus 37 ~~~l~gG~~n~~~~v~~~----~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~ 107 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTD----SG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLF 107 (346)
T ss_dssp EEECC----CEEEEEEET----TE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEE
T ss_pred eeeccccccCcEEEEEeC----CC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEE
Confidence 445666788999998764 33 389999875 23455566666665531 12344443 123467789
Q ss_pred EEEEccCCCCHH-----------h---hhhhc-C----CC-------CCCHHHH--------------------------
Q 010340 147 LVAEYMPNDTLA-----------K---HLFHW-E----NQ-------TIEWAMR-------------------------- 174 (512)
Q Consensus 147 lv~E~~~~g~L~-----------~---~l~~~-~----~~-------~l~~~~~-------------------------- 174 (512)
+||||++|.++. . .++.. . .. ...|...
T Consensus 108 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (346)
T 2q83_A 108 VVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQL 187 (346)
T ss_dssp EEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred EEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHH
Confidence 999999986542 0 11110 0 00 0122110
Q ss_pred -----HHHHHHHHHHHHHHhc------------CCCccccccCccceeecCCCCCeeecccCcc
Q 010340 175 -----LRVALYIAEALDYCSS------------EGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 175 -----~~i~~~i~~~L~~LH~------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
..+...+..++.+|+. ...++|+|+++.|||++.++.+.|+||+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 188 YLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223345566652 2239999999999999888899999999764
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.16 E-value=2.6e-06 Score=84.33 Aligned_cols=105 Identities=12% Similarity=0.016 Sum_probs=86.6
Q ss_pred hHHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHH
Q 010340 395 EWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTA 474 (512)
Q Consensus 395 ~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 474 (512)
........+..+..+|.++.+.|+|++|++.|++| . ++.+|...+.++...|+|+.|..+..+ |...|++
T Consensus 140 eA~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~--- 209 (449)
T 1b89_A 140 AAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE--- 209 (449)
T ss_dssp THHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---
T ss_pred HHHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---
Confidence 34444456678889999999999999999999999 3 688899999999999999999887765 4466655
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 475 FYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 475 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
...+...|...|++++|+..|++++.+|+.+...|
T Consensus 210 l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~f 244 (449)
T 1b89_A 210 LEELINYYQDRGYFEELITMLEAALGLERAHMGMF 244 (449)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHH
Confidence 44677899999999999999999999998876544
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.12 E-value=6.5e-06 Score=83.51 Aligned_cols=96 Identities=11% Similarity=-0.108 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHhH-H--HhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcC-----ChHHHHHHHHHHHhhCCCc
Q 010340 400 MRDMLEARKRGDV-A--FREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-----QPDAALRDAMQAQCVYPDW 471 (512)
Q Consensus 400 ~~~~~~~~~~g~~-~--~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~al~~~p~~ 471 (512)
..++..++.+|.. + ...+++++|+.+|++|++.+ ++.+++++|.+|. .| ++++|+..|++|+ +.+
T Consensus 245 ~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~ 317 (452)
T 3e4b_A 245 PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GRE 317 (452)
T ss_dssp GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTC
T ss_pred CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCC
Confidence 4568889999998 4 57899999999999999773 6899999999998 46 9999999999999 899
Q ss_pred HHHHHHHHHHHHH----cCChHHHHHHHHHHHhch
Q 010340 472 STAFYMQAVALAK----LDMHKDAADMLKEAASLE 502 (512)
Q Consensus 472 ~~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 502 (512)
+.+++++|.+|.. ..++++|+.+|++|.+.+
T Consensus 318 ~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 318 VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 9999999998887 449999999999999754
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.08 E-value=9.1e-06 Score=90.15 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=81.5
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCC-------------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYP------------- 469 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p------------- 469 (512)
...+...|..++..|+|++|+.+|.+| ..|..+|.+|.++|++++|++.+.+|...++
T Consensus 1195 ~ad~~~iGd~le~eg~YeeA~~~Y~kA---------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~E 1265 (1630)
T 1xi4_A 1195 NAHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKE 1265 (1630)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHhh---------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhH
Confidence 446677999999999999999999986 3588999999999999999999998855443
Q ss_pred ------------CcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 470 ------------DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 470 ------------~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.+++-+..++..|...|.|++|+..|+++|.+|+.|...+
T Consensus 1266 f~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmf 1317 (1630)
T 1xi4_A 1266 FRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMF 1317 (1630)
T ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHH
Confidence 2445566778889999999999999999999998876543
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.2e-05 Score=76.75 Aligned_cols=75 Identities=13% Similarity=0.020 Sum_probs=60.3
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC---CCCccceEEEEeeCCeeEEEEEc
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR---HKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+..++.|..+.+|+... ++..++||+.... ....+..|...|+.|. ...|++++.++...+..++||||
T Consensus 41 ~~~l~gG~~n~~y~v~~-----~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-----EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEECCSSSSEEEEEES-----SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eEEeCCccceeeeEEEE-----CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 45679999999999875 3455888987643 2567899999999883 36789999999888889999999
Q ss_pred cCCCCH
Q 010340 152 MPNDTL 157 (512)
Q Consensus 152 ~~~g~L 157 (512)
++|..+
T Consensus 113 l~G~~~ 118 (312)
T 3jr1_A 113 LNKSKN 118 (312)
T ss_dssp CCCCCC
T ss_pred ccCCCC
Confidence 999764
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.05 E-value=2.9e-05 Score=73.51 Aligned_cols=98 Identities=6% Similarity=-0.120 Sum_probs=56.9
Q ss_pred HHHHHhHHHhhhcHHHHHHHHHHHHhcCC--CCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCC------cHHHHHH
Q 010340 406 ARKRGDVAFREKEFKTAVDCYSQFIDVGT--MVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD------WSTAFYM 477 (512)
Q Consensus 406 ~~~~g~~~~~~~~~~~Ai~~~~~al~~~~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~ 477 (512)
+...|.++...|++++|++.+.++|..+| . +.+++...+.+++++|+.+.|.+.++++.+.+|+ ..-.++.
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 44566666666666666666666666654 3 5666666666666666666666666666666662 2222222
Q ss_pred HHHHHHHcC--ChHHHHHHHHHHHhchhh
Q 010340 478 QAVALAKLD--MHKDAADMLKEAASLEEK 504 (512)
Q Consensus 478 ~g~~~~~~~--~~~~A~~~~~~al~l~p~ 504 (512)
-|.+....| ++.+|...|+++.+..|+
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 233344444 666666666666555553
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.8e-05 Score=87.78 Aligned_cols=89 Identities=15% Similarity=0.222 Sum_probs=73.0
Q ss_pred HhHHHhhhcHHHHHHHHHHHH--------------------hcC--CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhh
Q 010340 410 GDVAFREKEFKTAVDCYSQFI--------------------DVG--TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 467 (512)
Q Consensus 410 g~~~~~~~~~~~Ai~~~~~al--------------------~~~--~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 467 (512)
|.++...|.|++|+..|+++- +.. .. .+.+|+++|.++...|++++|+..|.+|
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 666666666666666665542 211 23 6789999999999999999999999886
Q ss_pred CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 468 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 468 ~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
+++.+|++.|.++.++|+|++|+++|..|.+.+++
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 89999999999999999999999999999988754
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.97 E-value=2.8e-05 Score=65.28 Aligned_cols=93 Identities=12% Similarity=-0.020 Sum_probs=77.0
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---------hHHHhhhHHHhhhcCChHHHHHHHHHHHhhC------
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---------PTVYARRSLCHLMCDQPDAALRDAMQAQCVY------ 468 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------ 468 (512)
..+++....++..|.|+.|+-....++.+... + +.+++.+|.+++..++|.+|...|++||++.
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~-~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNN-NPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcC-CcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 45777888899999999999999998766422 2 3478899999999999999999999987543
Q ss_pred -------------------CCcHHHHHHHHHHHHHcCChHHHHHHHHH
Q 010340 469 -------------------PDWSTAFYMQAVALAKLDMHKDAADMLKE 497 (512)
Q Consensus 469 -------------------p~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 497 (512)
+.+.+..|.+|.||.+++++++|+..++.
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 12236889999999999999999998875
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.1e-05 Score=80.84 Aligned_cols=101 Identities=9% Similarity=0.015 Sum_probs=81.2
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCCh-----------------HHHhhhHHHhhhcCChHHHHHHHHHHHh
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP-----------------TVYARRSLCHLMCDQPDAALRDAMQAQC 466 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~~~al~ 466 (512)
....++|..+.+.|+|++|++.|.++++..+. .. .++.++|.+|...|++++|++.+.++++
T Consensus 5 ~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 5 GSKLEEARRLVNEKQYNEAEQVYLSLLDKDSS-QSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHHHHHHHSCCC-SSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34567788889999999999999999988776 32 3578899999999999999999999988
Q ss_pred hCCCcHH------HHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 467 VYPDWST------AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 467 ~~p~~~~------~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+.+...+ ....+|.++...|++++|+..+++++...++.
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 7766543 34456777888888888888888888877654
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.92 E-value=4.7e-05 Score=61.27 Aligned_cols=88 Identities=8% Similarity=-0.030 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCC---hHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHcCChHHHHHHH
Q 010340 420 KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ---PDAALRDAMQAQCVYPD-WSTAFYMQAVALAKLDMHKDAADML 495 (512)
Q Consensus 420 ~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~ 495 (512)
+...+.|.+=+ .+.+...+-++.|-++.+..+ ..++|..++..++..|. .-+.+|.+|.+++++|+|++|+.+.
T Consensus 24 ~~l~~qy~~E~--~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~ 101 (134)
T 3o48_A 24 EILRQQVVSEG--GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYV 101 (134)
T ss_dssp HHHHHHHHHTT--GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34444444433 233367888888888887765 44688888888888884 4788899999999999999999999
Q ss_pred HHHHhchhhhhhcC
Q 010340 496 KEAASLEEKRQRSG 509 (512)
Q Consensus 496 ~~al~l~p~~~~~~ 509 (512)
+..|+++|+|.+|.
T Consensus 102 d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 102 DTLFEHERNNKQVG 115 (134)
T ss_dssp HHHHTTCTTCHHHH
T ss_pred HHHHhhCCCCHHHH
Confidence 99999999887763
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.9e-05 Score=75.60 Aligned_cols=74 Identities=14% Similarity=0.178 Sum_probs=46.2
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---------CChhHHHHHHHHHhc-CCCCCccceEEEEeeCC
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---------PDPKQFADEAWGVGK-LRHKRLANLIGYCCDGD 143 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~ 143 (512)
-+..+|.|..+.||++.. +++.++||....... .....+..|+..+.. .....+.+++.+. .+
T Consensus 38 ~i~~l~~G~~n~vyrv~~-----~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~ 110 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-----SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RT 110 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-----SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TT
T ss_pred EEEEccCCCcEEEEEEEc-----CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CC
Confidence 466789999999999954 345699994322111 122234444433321 2335677888776 56
Q ss_pred eeEEEEEcc-CC
Q 010340 144 ERLLVAEYM-PN 154 (512)
Q Consensus 144 ~~~lv~E~~-~~ 154 (512)
..++||||+ +|
T Consensus 111 ~~~lv~e~l~~g 122 (420)
T 2pyw_A 111 MALIGMRYLEPP 122 (420)
T ss_dssp TTEEEECCCCTT
T ss_pred ccEEEEeecCCc
Confidence 679999999 76
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.89 E-value=7.8e-05 Score=70.50 Aligned_cols=100 Identities=9% Similarity=0.028 Sum_probs=79.4
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCC-----CCChHHHhhhHHHhhhcC--ChHHHHHHHHHHHhhCCCc--
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGT-----MVSPTVYARRSLCHLMCD--QPDAALRDAMQAQCVYPDW-- 471 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~-----~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~~-- 471 (512)
...+.+...+.++++.|+.+.|.+.+++..+.+| ++...+++.-|.+.+..| ++.+|+..|+++.+..|++
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc
Confidence 4567777889999999999999999999999977 213333333344466666 9999999999999999984
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhchh
Q 010340 472 STAFYMQAVALAKLDMHKDAADMLKEAASLEE 503 (512)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 503 (512)
...+++ +++.+|++++|...+++++++.|
T Consensus 214 ~~lLln---~~~~~g~~~eAe~~L~~l~~~~p 242 (310)
T 3mv2_B 214 QLGLLN---LHLQQRNIAEAQGIVELLLSDYY 242 (310)
T ss_dssp HHHHHH---HHHHHTCHHHHHHHHHHHHSHHH
T ss_pred HHHHHH---HHHHcCCHHHHHHHHHHHHHhcc
Confidence 344454 89999999999999999888853
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.86 E-value=3.6e-05 Score=77.02 Aligned_cols=101 Identities=9% Similarity=0.019 Sum_probs=84.6
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCC-----CChHHHhhhHHHhhhcCChHHHHHHHHHHHhh------CCCcH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTM-----VSPTVYARRSLCHLMCDQPDAALRDAMQAQCV------YPDWS 472 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~ 472 (512)
......|..+...|++++|+..+++++..... ....++.++|.+|..+|+|++|+..+++++.. .+...
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~ 175 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLV 175 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHH
Confidence 34445677777889999999999999865321 13678999999999999999999999999866 45568
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhchhh
Q 010340 473 TAFYMQAVALAKLDMHKDAADMLKEAASLEEK 504 (512)
Q Consensus 473 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 504 (512)
.++..+|.+|..+|+|++|...|++++.+.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 176 DVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 89999999999999999999999999988765
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00011 Score=60.03 Aligned_cols=73 Identities=8% Similarity=-0.003 Sum_probs=60.5
Q ss_pred ChHHHhhhHHHhhhcCC---hHHHHHHHHHHHhhCC-CcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 437 SPTVYARRSLCHLMCDQ---PDAALRDAMQAQCVYP-DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
...+-+++|.|+.+..+ ..++|..++..++-.| ..-+..|.+|.+++++|+|++|+.+.+..|+++|.|.+|.
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHH
Confidence 68888888888888765 4468888888888888 4578888889999999999999999999999999887663
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00011 Score=70.79 Aligned_cols=160 Identities=13% Similarity=0.098 Sum_probs=90.7
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCC
Q 010340 54 FAEFSLADLRAATNNFSSD--FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR 131 (512)
Q Consensus 54 ~~~~~~~~~~~~~~~f~~~--~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 131 (512)
+..++.+++......|.-. .-++.|+.|..+.+|+....+ + .+++|+..... ..+.+..|+.++..|...+
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~----g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g 76 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK----D-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKG 76 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS----C-CEEEEEECC-----CCHHHHHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC----c-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCC
Confidence 3456777888777776532 235567788889999988643 2 48899987531 2346777888887773212
Q ss_pred --ccceEEE------EeeCCeeEEEEEccCCCCHHh-----------h---hhhc----CCC---CC---CHHHHHH---
Q 010340 132 --LANLIGY------CCDGDERLLVAEYMPNDTLAK-----------H---LFHW----ENQ---TI---EWAMRLR--- 176 (512)
Q Consensus 132 --iv~l~~~------~~~~~~~~lv~E~~~~g~L~~-----------~---l~~~----~~~---~l---~~~~~~~--- 176 (512)
+.+++.. ....+..+++|+|++|..+.. . ++.. ... .. .|.....
T Consensus 77 ~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~ 156 (322)
T 2ppq_A 77 LSCPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSE 156 (322)
T ss_dssp CCCCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHG
T ss_pred CCCCcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHH
Confidence 3333321 123466789999999865321 0 1110 000 01 1221100
Q ss_pred ---------HHHHHHHHHHHHhc-------CCCccccccCccceeecCCCCCeeecccCcc
Q 010340 177 ---------VALYIAEALDYCSS-------EGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 177 ---------i~~~i~~~L~~LH~-------~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
+...+...+..+.. .+ ++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 157 ~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 157 ERADEVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHhhhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113334444442 23 8999999999999877666899998764
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.76 E-value=4.3e-05 Score=72.37 Aligned_cols=76 Identities=22% Similarity=0.275 Sum_probs=56.3
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-C--CCccceEEEEeeCCeeEEEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-H--KRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~E 150 (512)
-+..+|.|..+.||+.... +|+.|.||+...........|..|+..|+.|. . --+++++++. ..++|||
T Consensus 19 ~v~~~g~G~~~~vyrv~l~----DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e 90 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELA----DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEETTEEEEEEEET----TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred EEEecCCCCCeEEEEEEEC----CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence 3567899999999999987 56779999877554444567899999999884 2 2355666543 2478999
Q ss_pred ccCCCCH
Q 010340 151 YMPNDTL 157 (512)
Q Consensus 151 ~~~~g~L 157 (512)
|++++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987653
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00055 Score=65.86 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=62.0
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCC--
Q 010340 54 FAEFSLADLRAATNNFSSD--FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH-- 129 (512)
Q Consensus 54 ~~~~~~~~~~~~~~~f~~~--~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-- 129 (512)
+...+.+.+......|.-. .-+..++ |..+.||++... +|+.+++|+..... .....+..|+.++..+..
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~----~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g 81 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE----DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDE 81 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT----TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC----CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcC
Confidence 4556677777776655321 1233456 888899987654 34569999987442 245677888888887732
Q ss_pred CCccceEEE-----EeeCCeeEEEEEccCCCCH
Q 010340 130 KRLANLIGY-----CCDGDERLLVAEYMPNDTL 157 (512)
Q Consensus 130 ~niv~l~~~-----~~~~~~~~lv~E~~~~g~L 157 (512)
-.+++++.. ....+..++||++++|.++
T Consensus 82 ~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 82 VPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CSBCCCCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred CeecceeecCCcEEEEECCEEEEEEEecCCCCC
Confidence 124444443 2234567889999988543
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.65 E-value=3.7e-05 Score=76.16 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=64.1
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
.++...|..++..|+|++|+.+|.++ ..|..+|.|+.++|+|++|++.+.+| .++..|-..+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 38889999999999999999999977 34999999999999999999999999 57899999999999
Q ss_pred HcCChHHHHHHHHHHHhchhhh
Q 010340 484 KLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 484 ~~~~~~~A~~~~~~al~l~p~~ 505 (512)
.+|+|+.|..+... |.+.|++
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHH
T ss_pred HcCcHHHHHHHHHH-HHhCHhh
Confidence 99999999877664 4466653
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0005 Score=63.62 Aligned_cols=105 Identities=10% Similarity=-0.012 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHhHHH----h--hhcHHHHHH-----HHHHHHh-cCCCCChHHHhhhHHHhhh-----------cCChHH
Q 010340 400 MRDMLEARKRGDVAF----R--EKEFKTAVD-----CYSQFID-VGTMVSPTVYARRSLCHLM-----------CDQPDA 456 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~----~--~~~~~~Ai~-----~~~~al~-~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 456 (512)
...+..++.+|..|- . ...|.+++. .+.+++. .+|. +.++++..|.+... ++...+
T Consensus 103 ~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~ 181 (301)
T 3u64_A 103 YSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHA 181 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHH
Confidence 334555655554442 1 134444443 2345554 4455 78888887777643 123578
Q ss_pred HHHHHHHHHhhCCC--cHHHHHHHHHHHHHc-----CChHHHHHHHHHHHhchhhh
Q 010340 457 ALRDAMQAQCVYPD--WSTAFYMQAVALAKL-----DMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 457 A~~~~~~al~~~p~--~~~~~~~~g~~~~~~-----~~~~~A~~~~~~al~l~p~~ 505 (512)
|...+++|++++|+ +..+|..+|..|... |+.+.|.++|++||+++|+.
T Consensus 182 A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 182 AVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999 567999999999996 99999999999999999964
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00022 Score=57.31 Aligned_cols=81 Identities=7% Similarity=-0.061 Sum_probs=68.2
Q ss_pred HHHHHHHHhHHHhhhcHHH---HHHHHHHHHhcC-CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKT---AVDCYSQFIDVG-TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~---Ai~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
.+.-+..|..+.+..+-.. +|..++..+..+ |...-+.+|.+|..++++|+|++|..+++..|+++|++.+|.-.+
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 5567778888877666555 999999999887 533789999999999999999999999999999999999998877
Q ss_pred HHHHH
Q 010340 479 AVALA 483 (512)
Q Consensus 479 g~~~~ 483 (512)
..+-.
T Consensus 115 ~~i~~ 119 (126)
T 1nzn_A 115 RLIDK 119 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00011 Score=70.75 Aligned_cols=76 Identities=13% Similarity=0.034 Sum_probs=65.8
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
++..+...|..++..|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|++|+.++|.....++-.+
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~--s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~ 351 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEM--SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIEN 351 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhC
Confidence 355677788888889999999999999999985 4788899999999999999999999999999999875444433
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00015 Score=64.04 Aligned_cols=142 Identities=15% Similarity=0.026 Sum_probs=90.6
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCccccccCccceeecCCCCCeeecccCccccCCCCccccCc
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS-SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~t~ 233 (512)
-||.++|.. .+.++++.++|.++.|.+.+|.-+- ... -..+=+.|..|++..+|.+.+.+ +.+ .....
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~ 101 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEP 101 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-ccc--------ccccc
Confidence 379999965 6789999999999999999987762 122 11223457889999999887664 111 01233
Q ss_pred ccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHHHhhcc-
Q 010340 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY- 312 (512)
Q Consensus 234 ~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~- 312 (512)
.+.+||... ...+.+.-|||||++||..+--..+. .-+...++.+.+||..|...
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e-----------------------~eE~eLS~~LE~LL~~Mt~~~ 157 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE-----------------------NEERELSPPLEQLIDHMANTV 157 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT-----------------------TEEECCCHHHHHHHHHHTTCC
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc-----------------------ccchhhCHHHHHHHHHHHhcc
Confidence 567888873 34556778999999999998665431 11223334456677777644
Q ss_pred ------------------------CCCCCCChHHHHHHhcccc
Q 010340 313 ------------------------EPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 313 ------------------------~p~~Rps~~~vl~~L~~~~ 331 (512)
.+..|+++++|++.-..-.
T Consensus 158 ~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl 200 (229)
T 2yle_A 158 EADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHL 200 (229)
T ss_dssp C--------------------CCSCCCCCCSHHHHHHHHHTTS
T ss_pred cccccccccccccccccccccccccccCcCCHHHHHHHHHhhc
Confidence 3467889999988766543
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00011 Score=73.66 Aligned_cols=83 Identities=7% Similarity=-0.054 Sum_probs=67.0
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc-----CCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhC-----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVY----- 468 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~-----~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~----- 468 (512)
-+..+...|.++..+|+|++|+.+|+++|++ .+. + ...++|+|.+|..+|++++|+..+++|+++.
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 4677888999999999999999999999964 333 4 4569999999999999999999999998654
Q ss_pred CCc---HHHHHHHHHHHHHc
Q 010340 469 PDW---STAFYMQAVALAKL 485 (512)
Q Consensus 469 p~~---~~~~~~~g~~~~~~ 485 (512)
|++ .+.+.+++.+...+
T Consensus 407 ~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 407 REHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TTSHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHH
Confidence 555 44556666666544
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0002 Score=68.11 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=45.1
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCc-cceEEEEeeCCeeEEEEEcc-
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL-ANLIGYCCDGDERLLVAEYM- 152 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~- 152 (512)
+..|+.|..+.+|++ .. +++|+....... .....+|+.+++.+...++ .++++++ .+.-++|+||+
T Consensus 23 i~~l~gG~tN~~~~~--~~-------~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA--GD-------LCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE--TT-------EEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred eeEcCCcccccccee--ee-------EEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence 566788999999998 22 899988754211 1234568888887743233 4666554 33357899999
Q ss_pred CCCCH
Q 010340 153 PNDTL 157 (512)
Q Consensus 153 ~~g~L 157 (512)
+|.+|
T Consensus 91 ~g~~l 95 (301)
T 3dxq_A 91 GAQTM 95 (301)
T ss_dssp TCEEC
T ss_pred CCccC
Confidence 66544
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00014 Score=72.89 Aligned_cols=71 Identities=10% Similarity=0.075 Sum_probs=60.8
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc-----CCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHhhC-----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVY----- 468 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~-----~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~----- 468 (512)
-+..+...|.+|..+|+|++|+.+|+++|++ .++ + ...++|+|.+|..+|+|++|+..|++|+++.
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 4778889999999999999999999999964 344 4 4569999999999999999999999998764
Q ss_pred CCcHH
Q 010340 469 PDWST 473 (512)
Q Consensus 469 p~~~~ 473 (512)
|+++.
T Consensus 418 ~~Hp~ 422 (433)
T 3qww_A 418 KDHPY 422 (433)
T ss_dssp TTCHH
T ss_pred CCChH
Confidence 66654
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00052 Score=66.28 Aligned_cols=78 Identities=9% Similarity=-0.046 Sum_probs=42.1
Q ss_pred cccCCCCCCCe-EEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-C-CCccceEEEEeeCCeeEEEEEc
Q 010340 75 VSESGEKAPNV-VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-H-KRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 75 i~~lG~G~~g~-Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~l~~~~~~~~~~~lv~E~ 151 (512)
+..++.|.... +|+.... ++..+++|....... ..+..|+.++..+. + -.+.+++.+....+ ++|||+
T Consensus 23 ~~~l~gg~s~~~~~r~~~~----~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~ 93 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSP----TGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIED 93 (333)
T ss_dssp ECC--------CCEEEECT----TCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECC
T ss_pred eeECCCCCCCceEEEEEcC----CCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEee
Confidence 44555554444 6676542 245577776554321 34566777777773 2 34667777654333 789999
Q ss_pred cCCCCHHhhh
Q 010340 152 MPNDTLAKHL 161 (512)
Q Consensus 152 ~~~g~L~~~l 161 (512)
+.+.++.+++
T Consensus 94 l~~~~l~~~l 103 (333)
T 3csv_A 94 LGDALFTEVI 103 (333)
T ss_dssp CCSCBHHHHH
T ss_pred CCCcchHHHh
Confidence 9876665443
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00029 Score=70.67 Aligned_cols=77 Identities=16% Similarity=0.210 Sum_probs=52.3
Q ss_pred cccCCCCCCCeEEEEEEcCCC----CCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEEE
Q 010340 75 VSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 149 (512)
+..|+.|..+.||++....+. ..+..+++|+.... ...+.+.+|..++..|. +.-..++++.+.+ .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 556788889999999875321 02467899988432 12256778999999884 3334677776642 3899
Q ss_pred EccCCCCH
Q 010340 150 EYMPNDTL 157 (512)
Q Consensus 150 E~~~~g~L 157 (512)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987544
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0018 Score=52.81 Aligned_cols=81 Identities=4% Similarity=-0.141 Sum_probs=66.9
Q ss_pred HHHHHHHHhHHHhh---hcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 403 MLEARKRGDVAFRE---KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 403 ~~~~~~~g~~~~~~---~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
.+.-++.|..+.+. .+-.++|..++..+...|...-+.+|.+|..++++|+|++|..+++..|++.|+|.+|.-.+.
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 34556666666544 445689999999999888657899999999999999999999999999999999999887766
Q ss_pred HHHH
Q 010340 480 VALA 483 (512)
Q Consensus 480 ~~~~ 483 (512)
.+-.
T Consensus 119 ~Ie~ 122 (144)
T 1y8m_A 119 MVED 122 (144)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00044 Score=67.85 Aligned_cols=142 Identities=14% Similarity=0.125 Sum_probs=84.0
Q ss_pred cccCCCCCCCeEEEEEEcCC----CCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEEE
Q 010340 75 VSESGEKAPNVVYKGRLQDG----NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 149 (512)
+..+..|-.+.+|++....+ ..+++.+.+|+.... ......+.+|..+++.|. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45677788999999987531 113467999986432 234566779999998883 3334677776643 2999
Q ss_pred EccCCCCHHhh--------------hh--hcC----CCCC--CHHHHHHHHHHHHH-------------------HHHH-
Q 010340 150 EYMPNDTLAKH--------------LF--HWE----NQTI--EWAMRLRVALYIAE-------------------ALDY- 187 (512)
Q Consensus 150 E~~~~g~L~~~--------------l~--~~~----~~~l--~~~~~~~i~~~i~~-------------------~L~~- 187 (512)
||++|.+|..- |. +.. .... -+.++.++..++.. .+..
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665311 10 001 1112 24555555544422 1222
Q ss_pred ---HhcCC---CccccccCccceeecCC----CCCeeecccCcc
Q 010340 188 ---CSSEG---RPLYHDLNAYRVLFDEN----GDPRLSCFGLMK 221 (512)
Q Consensus 188 ---LH~~~---~iiH~Dlkp~Nill~~~----~~~kl~Dfg~a~ 221 (512)
|.... .++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 22211 38999999999999876 789999998763
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00074 Score=54.33 Aligned_cols=81 Identities=5% Similarity=-0.138 Sum_probs=66.4
Q ss_pred HHHHHHHhHHHhh---hcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 404 LEARKRGDVAFRE---KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 404 ~~~~~~g~~~~~~---~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
..-+..|..+.+. .+..++|..++..++.+|...-+.++.+|..++++|+|++|..+++.+|++.|+|.+|.-.+..
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 3445556666543 3567899999999998886468999999999999999999999999999999999998877766
Q ss_pred HHHH
Q 010340 481 ALAK 484 (512)
Q Consensus 481 ~~~~ 484 (512)
+-.+
T Consensus 121 Ie~k 124 (134)
T 3o48_A 121 VEDK 124 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0011 Score=66.66 Aligned_cols=75 Identities=11% Similarity=0.048 Sum_probs=48.7
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCc-cceEEEEeeCCeeEEEEEccC
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL-ANLIGYCCDGDERLLVAEYMP 153 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~~ 153 (512)
+..|+.|-.+.+|++.... .+..+++|+...... ..-.-.+|..++..|...++ .++++++. + .+||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~---~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMS---KQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETT---TTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECC---CCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 4467788889999998753 246788998754321 11123689999998854444 67777763 2 35999999
Q ss_pred CCCH
Q 010340 154 NDTL 157 (512)
Q Consensus 154 ~g~L 157 (512)
|.+|
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 8554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 512 | ||||
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-44 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-41 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-41 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-41 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-40 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-39 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 9e-39 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-37 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-37 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 9e-37 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-36 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-36 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 9e-36 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-35 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 8e-35 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-34 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-34 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-34 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 5e-34 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 8e-34 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-33 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-33 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-33 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-33 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 4e-33 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 5e-33 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 8e-33 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-32 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-32 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 5e-32 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 9e-30 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-29 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 9e-29 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-28 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-28 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-28 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-27 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-27 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 5e-27 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-26 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-26 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-25 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 5e-25 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-22 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-22 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-22 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 5e-22 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 6e-22 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 9e-22 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-21 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 3e-21 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 6e-21 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 8e-21 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 9e-21 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 9e-20 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 9e-20 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-19 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 5e-18 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 1e-14 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 6e-14 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-13 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 9e-13 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 4e-08 | |
| d1elwa_ | 117 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 2e-04 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 157 bits (397), Expect = 1e-44
Identities = 56/295 (18%), Positives = 114/295 (38%), Gaps = 22/295 (7%)
Query: 57 FSLADLRAATNNFSSDFIVSES------GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA 110
F+ D A F+ + +S G V G L+ ++A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 111 WPDP-KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTI 169
+ F EA +G+ H + +L G +++ E+M N +L +
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 170 EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY 229
+ + IA + Y + ++ DL A +L + N ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 230 STN---------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK 280
T + +T PE ++ + T S ++S+G V+ +++S P + +
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 281 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 335
++++ ++ + + + L C Q + RP +V+TL + P+
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPN 295
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (372), Expect = 2e-41
Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 17/267 (6%)
Query: 71 SDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH 129
S+ V E G +V+ G + + +A+K + A + + F +EA + KL H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDK----VAIKTIREGAMSE-EDFIEEAEVMMKLSH 59
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS 189
+L L G C + LV E+M + L+ + + L + L + E + Y
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNG 244
++ DL A L EN ++S FG+ + D + S+ + + PE
Sbjct: 119 EAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304
R + +S ++SFG ++ ++ S IP + + ++I + S+ V+
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH----VYQ 233
Query: 305 LASRCLQYEPRERPNTKDLVSTLAPLQ 331
+ + C + P +RP L+ LA +
Sbjct: 234 IMNHCWKERPEDRPAFSRLLRQLAEIA 260
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 147 bits (372), Expect = 3e-41
Identities = 52/262 (19%), Positives = 109/262 (41%), Gaps = 14/262 (5%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY+G + + +AVK + + ++F EA + +++H L L+G C
Sbjct: 32 EVYEGVWKKYS---LTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 87
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
++ E+M L +L Q + + L +A I+ A++Y + ++ DL A
Sbjct: 88 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNC 146
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL + + + +T PE L + + +S +++FG +L
Sbjct: 147 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 206
Query: 260 LDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN 319
++ + P +D+ + L++ V++L C Q+ P +RP+
Sbjct: 207 WEIATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 262
Query: 320 TKDLVSTLAPLQNRPDVPSYVM 341
++ + + V
Sbjct: 263 FAEIHQAFETMFQESSISDEVE 284
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (370), Expect = 3e-41
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 71 SDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH 129
D + E G VV G+ + D +A+K + + + +F +EA + L H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMIKEGSMSE-DEFIEEAKVMMNLSH 58
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS 189
++L L G C ++ EYM N L +L + L + + EA++Y
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE 117
Query: 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNG 244
S+ L+ DL A L ++ G ++S FGL + D + S+ + ++PPE L
Sbjct: 118 SKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304
+ + +S I++FG ++ ++ S +P + + L + V+
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS----ETAEHIAQGLRLYRPHLASEKVYT 232
Query: 305 LASRCLQYEPRERPNTKDLVSTL 327
+ C + ERP K L+S +
Sbjct: 233 IMYSCWHEKADERPTFKILLSNI 255
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (363), Expect = 3e-40
Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 14/250 (5%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V G + +AVK A + F EA + +LRH L L+G +
Sbjct: 22 DVMLGDYRG-----NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 74
Query: 145 RL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
L +V EYM +L +L + L+ +L + EA++Y ++ DL A
Sbjct: 75 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARN 133
Query: 204 VLFDENGDPRLSCFGLMKN-SRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 262
VL E+ ++S FGL K S + + +T PE LR + + +S ++SFG +L ++
Sbjct: 134 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 193
Query: 263 LSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 322
S +P + V+++ C + RP+
Sbjct: 194 YSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA----VYEVMKNCWHLDAAMRPSFLQ 249
Query: 323 LVSTLAPLQN 332
L L ++
Sbjct: 250 LREQLEHIKT 259
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 3e-39
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 16/248 (6%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ G +AVK + + P F EA + +L+H+RL L +
Sbjct: 28 EVWMGYYNGHTK----VAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 81
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
++ EYM N +L L + L +A IAE + + ++ DL A +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 140
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPESVIFSFGTVL 259
L + +++ FGL + D + + + +T PE + G T +S ++SFG +L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 260 LDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN 319
++++ IP + +N+ N E ++ L C + P +RP
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPT 256
Query: 320 TKDLVSTL 327
L S L
Sbjct: 257 FDYLRSVL 264
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 9e-39
Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 17/260 (6%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ G +A+K P+ F EA + KLRH++L L + +
Sbjct: 32 EVWMGTWNGTTR----VAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP 85
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+V EYM +L L + + + +A IA + Y ++ DL A +
Sbjct: 86 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANI 144
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL + D + + + +T PE GR T +S ++SFG +L
Sbjct: 145 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 204
Query: 260 LDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN 319
+L + +P ++ +L ++ E + DL +C + EP ERP
Sbjct: 205 TELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 260
Query: 320 TKDLVSTLAPLQNRPDVPSY 339
+ L + L + P Y
Sbjct: 261 FEYLQAFLEDYFTSTE-PQY 279
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (345), Expect = 2e-37
Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 30/263 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG+ +AVK A + F +E + K RH + +GY
Sbjct: 23 TVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA 75
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
+ +V ++ +L HL H E + +A A+ +DY + + H DL +
Sbjct: 76 PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYL--HAKSIIHRDLKS 132
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYST------NLAYTPPEYLR---NGRVTPESVI 252
+ E+ ++ FGL ++ + PE +R + +S +
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 253 FSFGTVLLDLLSGK----HIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASR 308
++FG VL +L++G+ +I + + G+ L S + N + L +
Sbjct: 193 YAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA----MKRLMAE 248
Query: 309 CLQYEPRERPNTKDLVSTLAPLQ 331
CL+ + ERP +++++ L
Sbjct: 249 CLKKKRDERPLFPQILASIELLA 271
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (344), Expect = 5e-37
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 18/269 (6%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VY G L D + + AVK + + QF E + H + +L+G C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 144 ER-LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
L+V YM + L ++ E + L +A+ + + +S + H DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS--KKFVHRDLAA 158
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--------LAYTPPEYLRNGRVTPESVIF 253
+ DE +++ FGL ++ D + S + + + E L+ + T +S ++
Sbjct: 159 RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 218
Query: 254 SFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYE 313
SFG +L +L++ PP ++ L L+ + + ++++ +C +
Sbjct: 219 SFGVLLWELMTRGA-PPYPDVNTFDITVYLLQGRRLLQPEYCPDP---LYEVMLKCWHPK 274
Query: 314 PRERPNTKDLVSTLAPLQNRPDVPSYVML 342
RP+ +LVS ++ + + YV +
Sbjct: 275 AEMRPSFSELVSRISAIFSTFIGEHYVHV 303
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (343), Expect = 9e-37
Identities = 54/303 (17%), Positives = 104/303 (34%), Gaps = 49/303 (16%)
Query: 62 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADE 120
+ ++F +SE G VV+K + +A K P Q E
Sbjct: 1 MELKDDDFE---KISELGAGNGGVVFKVSHKPSG---LVMARKLIHLEIKPAIRNQIIRE 54
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
+ + + G E + E+M +L + L + I + +V++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIA 112
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NLAYTPP 238
+ + L Y + + ++ D+ +L + G+ +L FG+ D + S +Y P
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKH------------------------------- 267
E L+ + +S I+S G L+++ G++
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 232
Query: 268 ---IPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV----FDLASRCLQYEPRERPNT 320
S+ +D I L+D + + V D ++CL P ER +
Sbjct: 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 292
Query: 321 KDL 323
K L
Sbjct: 293 KQL 295
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 135 bits (341), Expect = 2e-36
Identities = 58/272 (21%), Positives = 96/272 (35%), Gaps = 18/272 (6%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
VY R + +A+KK + + E + KLRH G
Sbjct: 30 AVYFARDVRNS---EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 86
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
LV EY H + ++ V + L Y S ++ D+ A
Sbjct: 87 EHTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKA 143
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTV 258
+L E G +L FG S+ + PE + G+ + ++S G
Sbjct: 144 GNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203
Query: 259 LLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318
++L K P + M +I L+ SE + CLQ P++RP
Sbjct: 204 CIELAERKP-PLFNMNAMSALYHIAQNESPALQSGHWSEYFR---NFVDSCLQKIPQDRP 259
Query: 319 NTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEA 350
++ L+ L+ RP P+ +M I R ++A
Sbjct: 260 TSEVLLKHRFVLRERP--PTVIMDLIQRTKDA 289
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 2e-36
Identities = 58/302 (19%), Positives = 115/302 (38%), Gaps = 17/302 (5%)
Query: 71 SDF-IVSESGEKAPNVVYKGR-LQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL 127
++F + G A VYKG + +G + +A+K+ + P K+ DEA+ + +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY 187
+ + L+G C +L+ + MP L + I L + IA+ ++Y
Sbjct: 69 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 188 CSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYL 241
+ DL A VL +++ FGL K + + + E +
Sbjct: 127 LEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301
+ T +S ++S+G + +L++ P D I I +++
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTID 241
Query: 302 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPM 361
V+ + +C + RP ++L+ + + P V+ G R PT + +
Sbjct: 242 VYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ-RYLVIQGDERMHLPSPTDSNFYRAL 300
Query: 362 GD 363
D
Sbjct: 301 MD 302
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (333), Expect = 9e-36
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 15/260 (5%)
Query: 85 VVYKGRLQDGNDNR-RWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG L+ + + +A+K F EA +G+ H + L G
Sbjct: 22 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 81
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+++ EYM N ++ + + IA + Y ++ + DL A
Sbjct: 82 KPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAAR 139
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSF 255
+L + N ++S FGL + D + + +T PE + + T S ++SF
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 256 GTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPR 315
G V+ ++++ P L ++ ++ + + ++ L +C Q E
Sbjct: 200 GIVMWEVMTYGE-RPYWELSN---HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA 255
Query: 316 ERPNTKDLVSTLAPLQNRPD 335
RP D+VS L L PD
Sbjct: 256 RRPKFADIVSILDKLIRAPD 275
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 1e-35
Identities = 50/252 (19%), Positives = 99/252 (39%), Gaps = 18/252 (7%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V KG Q + +AVK A + EA + +L + + +IG C
Sbjct: 22 TVKKGYYQMKKVVKT-VAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA- 79
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+ +LV E L K+L +N+ ++ + + ++ + Y ++ DL A
Sbjct: 80 ESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAAR 136
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSF 255
VL ++S FGL K R ++Y + + PE + + + +S ++SF
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 196
Query: 256 GTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPR 315
G ++ + S P ++G + +++ + ++DL + C Y+
Sbjct: 197 GVLMWEAFSYGQKPYRG----MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVE 252
Query: 316 ERPNTKDLVSTL 327
RP + L
Sbjct: 253 NRPGFAAVELRL 264
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 130 bits (327), Expect = 8e-35
Identities = 66/304 (21%), Positives = 108/304 (35%), Gaps = 45/304 (14%)
Query: 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNR--RWIAVKKFTKHAWPD-P 114
L L NN V + GE A V++ R +AVK + A D
Sbjct: 4 KLLSLEYPRNNIE---YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT------ 168
F EA + + + + L+G C G L+ EYM L + L T
Sbjct: 61 ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120
Query: 169 ----------------IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212
+ A +L +A +A + Y S ++ DL L EN
Sbjct: 121 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVV 179
Query: 213 RLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK 266
+++ FGL +N Y + + + PPE + R T ES ++++G VL ++ S
Sbjct: 180 KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 239
Query: 267 HIPPSHALDMIRGKNILHLMDSHLEGN---FSSEEATVVFDLASRCLQYEPRERPNTKDL 323
P G ++ +GN +++L C P +RP+ +
Sbjct: 240 LQPYY-------GMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI 292
Query: 324 VSTL 327
L
Sbjct: 293 HRIL 296
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (324), Expect = 1e-34
Identities = 59/266 (22%), Positives = 97/266 (36%), Gaps = 28/266 (10%)
Query: 71 SDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGK 126
DF I G+ VY R + +A+K K Q E
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSK---FILALKVLFKAQLEKAGVEHQLRREVEIQSH 62
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALD 186
LRH + L GY D L+ EY P T+ + L + +A AL
Sbjct: 63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALS 120
Query: 187 YCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--LAYTPPEYLRNG 244
YC S+ ++ D+ +L G+ +++ FG ++ + + L Y PPE +
Sbjct: 121 YCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-----SEEA 299
+ ++S G + + L GK PP F+ +E A
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGK--PP------FEANTYQETYKRISRVEFTFPDFVTEGA 231
Query: 300 TVVFDLASRCLQYEPRERPNTKDLVS 325
DL SR L++ P +RP ++++
Sbjct: 232 ---RDLISRLLKHNPSQRPMLREVLE 254
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 1e-34
Identities = 52/263 (19%), Positives = 112/263 (42%), Gaps = 28/263 (10%)
Query: 85 VVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD 141
+VY+G + ++ +A+K + A + +F +EA + + + L+G
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 142 GDERLLVAEYMPNDTLAKHLFHW--------ENQTIEWAMRLRVALYIAEALDYCSSEGR 193
G L++ E M L +L + +++A IA+ + Y ++
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 154
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVT 247
++ DL A + E+ ++ FG+ ++ + Y + + PE L++G T
Sbjct: 155 -VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 248 PESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV---VFD 304
S ++SFG VL ++ + P +G + ++ +EG + +F+
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPY-------QGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 266
Query: 305 LASRCLQYEPRERPNTKDLVSTL 327
L C QY P+ RP+ +++S++
Sbjct: 267 LMRMCWQYNPKMRPSFLEIISSI 289
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (321), Expect = 4e-34
Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 23/268 (8%)
Query: 72 DF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLR 128
D+ ++ G + K R + + + + K+ + + + E + +L+
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 61
Query: 129 HKRLANLIGYCCDGDERLL--VAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEA 184
H + D L V EY LA + E Q ++ LRV + A
Sbjct: 62 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121
Query: 185 LDYCSSEGR---PLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP--- 237
L C + H DL V D + +L FGL + S++ TP
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 181
Query: 238 -PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296
PE + +S I+S G +L +L + + + + GK I + +S
Sbjct: 182 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK-IREGKFRRIPYRYSD 240
Query: 297 EEATVVFDLASRCLQYEPRERPNTKDLV 324
E + ++ +R L + RP+ ++++
Sbjct: 241 E----LNEIITRMLNLKDYHRPSVEEIL 264
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (324), Expect = 5e-34
Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 37/276 (13%)
Query: 85 VVYKGRLQDGNDNRRW--IAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCC 140
V + +AVK + A + + E + +L H+ + NL+G C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 141 DGDERLLVAEYMPNDTLAKHLF---------------------HWENQTIEWAMRLRVAL 179
L+ EY L +L + + + L A
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 180 YIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------ 232
+A+ +++ + H DL A VL ++ FGL ++ +Y
Sbjct: 172 QVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 229
Query: 233 LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292
+ + PE L G T +S ++S+G +L ++ S P + N L+ + +
Sbjct: 230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKM 286
Query: 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328
+ ++ + C ++ R+RP+ +L S L
Sbjct: 287 DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (321), Expect = 8e-34
Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 25/265 (9%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKL-RHKRLANLIGYCCDG 142
V K R++ R A+K+ ++A D + FA E + KL H + NL+G C
Sbjct: 25 QVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 83
Query: 143 DERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEALDYC 188
L EY P+ L L + T+ L A +A +DY
Sbjct: 84 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 143
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGR 245
S + ++ DL A +L EN +++ FGL + + + + E L
Sbjct: 144 SQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV 202
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305
T S ++S+G +L +++S P + + N E V+DL
Sbjct: 203 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDE----VYDL 258
Query: 306 ASRCLQYEPRERPNTKDLVSTLAPL 330
+C + +P ERP+ ++ +L +
Sbjct: 259 MRQCWREKPYERPSFAQILVSLNRM 283
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (316), Expect = 2e-33
Identities = 39/251 (15%), Positives = 88/251 (35%), Gaps = 19/251 (7%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG + +A + + ++F +EA + L+H +
Sbjct: 24 TVYKGLD---TETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST 80
Query: 143 DER----LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH- 197
+ +LV E M + TL +L + ++ + I + L + + P+ H
Sbjct: 81 VKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHR 138
Query: 198 DLNAYRVLF-DENGDPRLSCFGLMKNSRDGKSYST--NLAYTPPEYLRNGRVTPESVIFS 254
DL + G ++ GL R + + + PE + +++
Sbjct: 139 DLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYA 197
Query: 255 FGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEP 314
FG +L++ + ++ + + + + E ++ C++
Sbjct: 198 FGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK---EIIEGCIRQNK 254
Query: 315 RERPNTKDLVS 325
ER + KDL++
Sbjct: 255 DERYSIKDLLN 265
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 2e-33
Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 27/264 (10%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLA 133
I+ E G+ A VYK + ++ + A K + + + + E + H +
Sbjct: 16 IIGELGDGAFGKVYKAQNKETS---VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 72
Query: 134 NLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193
L+ + ++ E+ + + + + + V +AL+Y
Sbjct: 73 KLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKI 131
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST----NLAYTPPEYL-----RNG 244
++ DL A +LF +GD +L+ FG+ + + PE + ++
Sbjct: 132 -IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 190
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE-----A 299
++ ++S G L+++ + PP H N + ++ + + +
Sbjct: 191 PYDYKADVWSLGITLIEMAEIE--PPHH------ELNPMRVLLKIAKSEPPTLAQPSRWS 242
Query: 300 TVVFDLASRCLQYEPRERPNTKDL 323
+ D +CL+ R T L
Sbjct: 243 SNFKDFLKKCLEKNVDARWTTSQL 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (316), Expect = 2e-33
Identities = 50/251 (19%), Positives = 97/251 (38%), Gaps = 16/251 (6%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +G + +A+K + D ++ EA + +L + + LIG C +
Sbjct: 24 SVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAE 81
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
+LV E L K L + + I + + ++ + Y + ++ DL A
Sbjct: 82 ALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARN 139
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSFG 256
VL ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 199
Query: 257 TVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRE 316
+ + LS P ++G ++ ++ E ++ L S C Y+ +
Sbjct: 200 VTMWEALSYGQKP----YKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWED 255
Query: 317 RPNTKDLVSTL 327
RP+ + +
Sbjct: 256 RPDFLTVEQRM 266
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 4e-33
Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 13/252 (5%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V++G + +A+K ++F EA + + H + LIG + +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
++ E L + +++ A + A ++ AL Y S+ ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARN 138
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPESVIFSFGTV 258
VL N +L FGL + D Y + + + PE + R T S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 259 LLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 318
+ ++L P + I + + N ++ L ++C Y+P RP
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT----LYSLMTKCWAYDPSRRP 254
Query: 319 NTKDLVSTLAPL 330
+L + L+ +
Sbjct: 255 RFTELKAQLSTI 266
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 4e-33
Identities = 49/293 (16%), Positives = 97/293 (33%), Gaps = 50/293 (17%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD- 143
V++G+ + +AVK F+ E + LRH+ + I +
Sbjct: 18 EVWRGKWRG-----EEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNG 71
Query: 144 ---ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG------RP 194
+ LV++Y + +L +L T+ +++AL A L + E
Sbjct: 72 TWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 195 LYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--------NLAYTPPEYL---- 241
+ H DL + +L +NG ++ GL Y PE L
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 188
Query: 242 --RNGRVTPESVIFSFGTVLLDLLSGKHIPPSH---------------ALDMIRGKNILH 284
++ + I++ G V ++ I H +++ +R
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 248
Query: 285 LMDSHLEGNFSSEEAT-VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 336
+ ++ + S EA V+ + C R + TL+ L + +
Sbjct: 249 KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 5e-33
Identities = 49/257 (19%), Positives = 86/257 (33%), Gaps = 16/257 (6%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
VV +G + +AVK P F E + L H+ L L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
+ +V E P +L R A+ +AE + Y S+ ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFS 254
+L ++ FGLM+ + A+ PE L+ + S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 255 FGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEP 314
FG L ++ + P I + ++ ++++ +C ++P
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD---IYNVMVQCWAHKP 256
Query: 315 RERPNTKDLVSTLAPLQ 331
+RP L L Q
Sbjct: 257 EDRPTFVALRDFLLEAQ 273
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 8e-33
Identities = 49/269 (18%), Positives = 95/269 (35%), Gaps = 30/269 (11%)
Query: 85 VVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCC 140
V + +D +AVK A + + E + L H + NL+G C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 141 DGDERLLVAEYMPNDTLAKHLFHW----------------ENQTIEWAMRLRVALYIAEA 184
G L++ EY L L + ++ L + +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPP 238
+ + +S+ ++ DL A +L ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298
E + N T ES ++S+G L +L S P ++
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---SKFYKMIKEGFRMLSPEHA 273
Query: 299 ATVVFDLASRCLQYEPRERPNTKDLVSTL 327
++D+ C +P +RP K +V +
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 1e-32
Identities = 51/266 (19%), Positives = 83/266 (31%), Gaps = 18/266 (6%)
Query: 69 FSSDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGK 126
F D+ +V GE A V + +AVK D P+ E
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKM 59
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALD 186
L H+ + G+ +G+ + L EY L + + + R + +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 117
Query: 187 YCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEY 240
Y G + D+ +L DE + ++S FGL R L Y PE
Sbjct: 118 YLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 241 LRNGRVTPESV-IFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299
L+ E V ++S G VL +L+G+ + +
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 236
Query: 300 TVVFDLASRCLQYEPRERPNTKDLVS 325
L + L P R D+
Sbjct: 237 ---LALLHKILVENPSARITIPDIKK 259
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 4e-32
Identities = 39/243 (16%), Positives = 88/243 (36%), Gaps = 14/243 (5%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY + +A+++ P + +E + + ++ + N + GDE
Sbjct: 35 TVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+V EY+ +L + ++ V +AL++ S ++ D+ + +
Sbjct: 92 LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNI 147
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN----LAYTPPEYLRNGRVTPESVIFSFGTVLL 260
L +G +L+ FG +S + + PE + P+ I+S G + +
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 207
Query: 261 DLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 320
+++ G+ + + S D +RCL + +R +
Sbjct: 208 EMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR---DFLNRCLDMDVEKRGSA 264
Query: 321 KDL 323
K+L
Sbjct: 265 KEL 267
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 124 bits (311), Expect = 5e-32
Identities = 45/246 (18%), Positives = 82/246 (33%), Gaps = 16/246 (6%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VV++ + A K D + E + LRH L NL D +E
Sbjct: 41 VVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 97
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+++ E+M L + + E+ + + + + L + ++ DL +
Sbjct: 98 MVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENI 155
Query: 205 LF--DENGDPRLSCFGLMKNSRDGKSYST---NLAYTPPEYLRNGRVTPESVIFSFGTVL 259
+F + + +L FGL + +S + PE V + ++S G +
Sbjct: 156 MFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 215
Query: 260 LDLLSGKHIPPSHALD--MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRER 317
LLSG D + K+ MD S + D + L +P R
Sbjct: 216 YILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED----GKDFIRKLLLADPNTR 271
Query: 318 PNTKDL 323
Sbjct: 272 MTIHQA 277
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 117 bits (294), Expect = 9e-30
Identities = 54/309 (17%), Positives = 101/309 (32%), Gaps = 32/309 (10%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLA 133
I+ E G A VV++ R K D +E + +L H +L
Sbjct: 33 ILEELGSGAFGVVHRCVE---KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 89
Query: 134 NLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193
NL D E +L+ E++ L + E+ + A + E L +
Sbjct: 90 NLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI 148
Query: 194 PLYHDLNAYRVLFDENGDPR--LSCFGLMKNSRDGKS---YSTNLAYTPPEYLRNGRVTP 248
++ D+ ++ + + FGL + + + PE + V
Sbjct: 149 -VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGF 207
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV------V 302
+ +++ G + LLSG G++ L + + ++ +E
Sbjct: 208 YTDMWAIGVLGYVLLSGLSPFA--------GEDDLETLQNVKRCDWEFDEDAFSSVSPEA 259
Query: 303 FDLASRCLQYEPRERPNTKDLVS------TLAPLQNRPDVPSYVML--GIPRHEEAPPTP 354
D LQ EPR+R D + + L +R Y + I P P
Sbjct: 260 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAP 319
Query: 355 QHPLSPMGD 363
Q + + +
Sbjct: 320 QPAIGRIAN 328
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 3e-29
Identities = 41/258 (15%), Positives = 89/258 (34%), Gaps = 19/258 (7%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLA 133
I + G +V++ + K D E + RH+ +
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSK---KTYMAKFVKVKG-TDQVLVKKEISILNIARHRNIL 64
Query: 134 NLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193
+L +E +++ E++ + + + + + + + EAL + S
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNI 123
Query: 194 PLYHDLNAYRVLFDENGDPR--LSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGRVTP 248
+ D+ +++ + FG + + G ++ Y PE ++ V+
Sbjct: 124 -GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVST 182
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH---LMDSHLEGNFSSEEATVVFDL 305
+ ++S GT++ LLSG + P + +NI++ D S E D
Sbjct: 183 ATDMWSLGTLVYVLLSGIN-PFLAETNQQIIENIMNAEYTFDEEAFKEISIE----AMDF 237
Query: 306 ASRCLQYEPRERPNTKDL 323
R L E + R +
Sbjct: 238 VDRLLVKERKSRMTASEA 255
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 113 bits (284), Expect = 9e-29
Identities = 47/254 (18%), Positives = 79/254 (31%), Gaps = 31/254 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V + + +A+K K A +E + K++H + L G
Sbjct: 24 EVILAEDKRTQ---KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG 80
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNA 201
L+ + + L + E R+ + +A+ Y G N
Sbjct: 81 HLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 138
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYTPPEYLRNGRVTPESVIFSFGTV 258
DE+ +S FGL K G ST Y PE L + +S G +
Sbjct: 139 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 198
Query: 259 LLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS---------SEEATVVFDLASRC 309
LL G PP +N L + L+ + S+ A D
Sbjct: 199 AYILLCGY--PP------FYDENDAKLFEQILKAEYEFDSPYWDDISDSAK---DFIRHL 247
Query: 310 LQYEPRERPNTKDL 323
++ +P +R +
Sbjct: 248 MEKDPEKRFTCEQA 261
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (282), Expect = 1e-28
Identities = 45/262 (17%), Positives = 83/262 (31%), Gaps = 33/262 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
V R + R A+K K E + +L H L D
Sbjct: 23 TVVLARELATS---REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 79
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
++ Y N L K++ + + I AL+Y + + H DL
Sbjct: 80 DEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG--KGIIHRDLK 135
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFS 254
+L +E+ +++ FG K S+ Y PE L S +++
Sbjct: 136 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWA 195
Query: 255 FGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-----SEEATVVFDLASRC 309
G ++ L++G PP R N + ++ + +A DL +
Sbjct: 196 LGCIIYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKAR---DLVEKL 244
Query: 310 LQYEPRERPNTKDLVSTLAPLQ 331
L + +R +++
Sbjct: 245 LVLDATKRLGCEEMEGYGPLKA 266
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 3e-28
Identities = 46/271 (16%), Positives = 92/271 (33%), Gaps = 29/271 (10%)
Query: 85 VVYKGRLQ--DGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCC- 140
V + D R +AVK + A + + E + + H + C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 141 -DGDERLLVAEYMPNDTLAKHLFHWENQTIE--------------WAMRLRVALYIAEAL 185
G +++ E+ L+ +L N+ + + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 186 DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPE 239
++ +S ++ DL A +L E ++ FGL ++ Y L + PE
Sbjct: 148 EFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEA 299
+ + T +S ++SFG +L ++ S P + +
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---EEFCRRLKEGTRMRAPDYTT 263
Query: 300 TVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330
++ C EP +RP +LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 110 bits (275), Expect = 9e-28
Identities = 48/265 (18%), Positives = 92/265 (34%), Gaps = 27/265 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
V+ R R +AVK DP +F EA L H + +
Sbjct: 22 EVHLARDLR---LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 78
Query: 142 ----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
G +V EY+ TL + + + V +AL++ G ++
Sbjct: 79 ETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGI-IHR 135
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL-------AYTPPEYLRNGRVTPES 250
D+ ++ ++ FG+ + D + T Y PE R V S
Sbjct: 136 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 195
Query: 251 VIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH--LMDSHLEGNFSSEEATVVFDLASR 308
++S G VL ++L+G+ + + +++ + S S++ + + +
Sbjct: 196 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD----LDAVVLK 251
Query: 309 CLQYEPRERPNT-KDLVSTLAPLQN 332
L P R T ++ + L + N
Sbjct: 252 ALAKNPENRYQTAAEMRADLVRVHN 276
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 110 bits (275), Expect = 2e-27
Identities = 60/304 (19%), Positives = 107/304 (35%), Gaps = 29/304 (9%)
Query: 71 SDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGK 126
DF I+ G + V+ R + N R+ A+K K KQ DE +
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALD 186
+ H + + G D + ++ +Y+ L ++Q + A + AL+
Sbjct: 61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALE 118
Query: 187 YCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGR 245
Y S+ +Y DL +L D+NG +++ FG K D + Y PE +
Sbjct: 119 YLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-----SEEAT 300
+SFG ++ ++L+G N + + L +E+
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDV- 228
Query: 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 360
DL SR + + +R +L + ++N P V + P
Sbjct: 229 --KDLLSRLITRDLSQRLG--NLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQG 284
Query: 361 MGDA 364
GD
Sbjct: 285 QGDT 288
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 2e-27
Identities = 52/269 (19%), Positives = 100/269 (37%), Gaps = 31/269 (11%)
Query: 85 VVYKGRL----QDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGY 138
V +D + +AVK A D E + + +HK + NL+G
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 139 CCDGDERLLVAEYMPNDTLAKHLFHW--------------ENQTIEWAMRLRVALYIAEA 184
C ++ EY L ++L + + + A +A
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPP 238
++Y +S+ ++ DL A VL E+ +++ FGL ++ Y + + P
Sbjct: 148 MEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298
E L + T +S ++SFG +L ++ + P + + + + L+ + S
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EELFKLLKEGHRMDKPSNC 262
Query: 299 ATVVFDLASRCLQYEPRERPNTKDLVSTL 327
++ + C P +RP K LV L
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 109 bits (274), Expect = 5e-27
Identities = 56/264 (21%), Positives = 85/264 (32%), Gaps = 23/264 (8%)
Query: 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP------KQFADE 120
N+FS + G VY R D + A+K K
Sbjct: 4 NDFS---VHRIIGRGGFGEVYGCRK---ADTGKMYAMKCLDKKRIKMKQGETLALNERIM 57
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
V + + D+ + + M L HL ++ A A
Sbjct: 58 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAE 115
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--LAYTPP 238
I L++ + +Y DL +L DE+G R+S GL + K +++ Y P
Sbjct: 116 IILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 174
Query: 239 EYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHAL-DMIRGKNILHLMDSHLEGNFSS 296
E L+ G + FS G +L LL G H D + M L +FS
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 234
Query: 297 EEATVVFDLASRCLQYEPRERPNT 320
E + L LQ + R
Sbjct: 235 E----LRSLLEGLLQRDVNRRLGC 254
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 2e-26
Identities = 48/251 (19%), Positives = 87/251 (34%), Gaps = 30/251 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ----FADEAWGVGKLRHKRLANLIGYCC 140
V+ + N ++ A+K K ++ H L ++
Sbjct: 17 KVFLAEFKKTN---QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 73
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200
+ V EY+ L H+ + + A I L + S+G +Y DL
Sbjct: 74 TKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLK 130
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA----YTPPEYLRNGRVTPESVIFSFG 256
+L D++G +++ FG+ K + G + + Y PE L + +SFG
Sbjct: 131 LDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFG 190
Query: 257 TVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-----SEEATVVFDLASRCLQ 311
+L ++L G+ G++ L S N +EA DL +
Sbjct: 191 VLLYEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAK---DLLVKLFV 239
Query: 312 YEPRERPNTKD 322
EP +R +
Sbjct: 240 REPEKRLGVRG 250
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 3e-26
Identities = 42/252 (16%), Positives = 83/252 (32%), Gaps = 21/252 (8%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP------KQFADEAWGVGKLRHKRLANLIGY 138
VV K R + A K K + E + +++H + L
Sbjct: 25 VVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEV 81
Query: 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHD 198
+ + +L+ E + L E +++ I + Y S + + D
Sbjct: 82 YENKTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSL-QIAHFD 138
Query: 199 LNAYRVLFDENGDPR----LSCFGLMKNSRDGKSYSTNL---AYTPPEYLRNGRVTPESV 251
L ++ + P+ + FGL G + + PE + + E+
Sbjct: 139 LKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 198
Query: 252 IFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 311
++S G + LLSG N+ ++ E + S + + D R L
Sbjct: 199 MWSIGVITYILLSGASPFLGDTKQETL-ANVSA-VNYEFEDEYFSNTSALAKDFIRRLLV 256
Query: 312 YEPRERPNTKDL 323
+P++R +D
Sbjct: 257 KDPKKRMTIQDS 268
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 102 bits (256), Expect = 4e-25
Identities = 48/284 (16%), Positives = 93/284 (32%), Gaps = 46/284 (16%)
Query: 69 FSSDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---------KQFA 118
F ++ G +VV + + + AVK +
Sbjct: 1 FYENYEPKEILGRGVSSVVRRCIHKP---TCKEYAVKIIDVTGGGSFSAEEVQELREATL 57
Query: 119 DEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRV 177
E + K+ H + L LV + M L +L E T+ ++
Sbjct: 58 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKI 115
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLA 234
+ E + ++ DL +L D++ + +L+ FG G+ +
Sbjct: 116 MRALLEVICALHKLNI-VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 174
Query: 235 YTPPEYLRNGRV------TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288
Y PE + E ++S G ++ LL+G PP + + ++
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PP------FWHRKQMLMLRM 226
Query: 289 HLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDL 323
+ GN+ S+ DL SR L +P++R ++
Sbjct: 227 IMSGNYQFGSPEWDDYSDTV---KDLVSRFLVVQPQKRYTAEEA 267
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 5e-25
Identities = 55/251 (21%), Positives = 94/251 (37%), Gaps = 29/251 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP------KQFADEAWGVGKLR--HKRLANLI 136
VY G N +A+K K D + E + K+ + L+
Sbjct: 19 SVYSGIRVSDN---LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 75
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+ D +L+ E E ++ + + EA+ +C + G L+
Sbjct: 76 DWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LH 133
Query: 197 HDLNAYRVLFDEN-GDPRLSCFGLMKNSRDG--KSYSTNLAYTPPEYLRNGRVTPESV-I 252
D+ +L D N G+ +L FG +D + Y+PPE++R R S +
Sbjct: 134 RDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 193
Query: 253 FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
+S G +L D++ G P H ++IRG+ SSE L CL
Sbjct: 194 WSLGILLYDMVCGDI-PFEHDEEIIRGQVFF-------RQRVSSE----CQHLIRWCLAL 241
Query: 313 EPRERPNTKDL 323
P +RP +++
Sbjct: 242 RPSDRPTFEEI 252
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.7 bits (237), Expect = 1e-22
Identities = 50/271 (18%), Positives = 86/271 (31%), Gaps = 38/271 (14%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----PKQFADEAWGVGKLRHKRLANLIGYC 139
VYK R ++ N + +A+KK + + E + +L H + L+
Sbjct: 13 TVYKARDKNTN---QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF 69
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199
LV ++M D + + + + L + L+Y L+ DL
Sbjct: 70 GHKSNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDL 126
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT-----PPEYLRNGRVTPESVIFS 254
+L DENG +L+ FGL K+ T+ T P +++
Sbjct: 127 KPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWA 186
Query: 255 FGTVLLDLLSGKHIPPS----HALDMI----------RGKNILHLMDSHLEGNFSSEEAT 300
G +L +LL P L I + ++ L D +F
Sbjct: 187 VGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH 246
Query: 301 VVF--------DLASRCLQYEPRERPNTKDL 323
+F DL + P R
Sbjct: 247 HIFSAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.9 bits (238), Expect = 2e-22
Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 26/254 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD-- 141
V + + + A+K + E + + + ++ +
Sbjct: 27 KVLQIFNKR---TQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLY 78
Query: 142 --GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199
L+V E + L + +Q + I EA+ Y S + D+
Sbjct: 79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-HRDV 137
Query: 200 NAYRVLFD---ENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGRVTPESVIF 253
+L+ N +L+ FG K + S +T Y PE L + ++
Sbjct: 138 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 197
Query: 254 SFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV----FDLASRC 309
S G ++ LL G PP ++ + + + F + E + V L
Sbjct: 198 SLGVIMYILLCGY--PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 255
Query: 310 LQYEPRERPNTKDL 323
L+ EP +R +
Sbjct: 256 LKTEPTQRMTITEF 269
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.6 bits (234), Expect = 4e-22
Identities = 44/283 (15%), Positives = 89/283 (31%), Gaps = 36/283 (12%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-----KQFADEAWGVGKLR 128
V+E GE A V+K R D + R++A+K+ + + +
Sbjct: 11 CVAEIGEGAYGKVFKAR--DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68
Query: 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLA----KHLFHWENQTIEWAMRLRVALYIAEA 184
H + L C + + + +L + + +
Sbjct: 69 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYL 241
LD+ S ++ DL +L +G +L+ FGL + + ++ L Y PE L
Sbjct: 129 LDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 187
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGKHI---------------------PPSHALDMIRGK 280
++S G + ++ K + D+ +
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247
Query: 281 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
H + F ++ + DL +CL + P +R +
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 93.8 bits (232), Expect = 5e-22
Identities = 49/280 (17%), Positives = 93/280 (33%), Gaps = 37/280 (13%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKR 131
+ + GE VVYK + G A+KK + P E + +L+H
Sbjct: 6 GLEKIGEGTYGVVYKAQNNYG----ETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE 191
+ L +LV E++ D L +E L + + YC
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 192 GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRN-GRV 246
L+ DL +L + G+ +++ FGL + L Y P+ L +
Sbjct: 120 R-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 247 TPESVIFSFGTVLLDLLSGKHIPPS-----------------------HALDMIRGKNIL 283
+ I+S G + ++++G + P + ++ +
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 284 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
+ + +F DL S+ L+ +P +R K
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.9 bits (235), Expect = 6e-22
Identities = 46/274 (16%), Positives = 89/274 (32%), Gaps = 39/274 (14%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
+V N N+ +A+KK + ++ E + + RH+ + +
Sbjct: 23 MVCSAYD---NVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 79
Query: 144 ERLLVAEYMPNDTLAKHLFHW-ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+ Y+ + L+ + Q + I L Y S L+ DL
Sbjct: 80 IEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPS 138
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYST-------NLAYTPPEYLRNGRVTPESV-IFS 254
+L + D ++ FGL + + ++ Y PE + N + +S+ I+S
Sbjct: 139 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 198
Query: 255 FGTVLLDLLSGKHI-------------------PPSHALDMIRGKNILHLMDSHLEGNFS 295
G +L ++LS + I P L+ I + + S N
Sbjct: 199 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 258
Query: 296 SEEATV------VFDLASRCLQYEPRERPNTKDL 323
DL + L + P +R +
Sbjct: 259 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 93.4 bits (231), Expect = 9e-22
Identities = 42/264 (15%), Positives = 77/264 (29%), Gaps = 33/264 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC-DGD 143
+Y G D +A+K Q E+ ++ I +C +GD
Sbjct: 22 DIYLGT--DIAAGEE-VAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGD 76
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
++V E + LF++ ++ L +A + ++Y S+ ++ D+
Sbjct: 77 YNVMVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDN 133
Query: 204 VLFDENGDPRL---SCFGLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVTPE 249
L L FGL K RD +++ Y +
Sbjct: 134 FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR 193
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHALDMIRGK------NILHLMDSHLEGNFSSEEATVVF 303
+ S G VL+ G R K + L + SE
Sbjct: 194 DDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSE----FA 249
Query: 304 DLASRCLQYEPRERPNTKDLVSTL 327
+ C ++P+ L
Sbjct: 250 TYLNFCRSLRFDDKPDYSYLRQLF 273
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.3 bits (231), Expect = 2e-21
Identities = 50/244 (20%), Positives = 83/244 (34%), Gaps = 19/244 (7%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
V R + R+ A+K K E+ + RH L L
Sbjct: 20 KVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT 76
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
D V EY L HL T E A I AL+Y S +Y D+
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSRD-VVYRDIKL 133
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA----YTPPEYLRNGRVTPESVIFSFGT 257
++ D++G +++ FGL K + Y PE L + + G
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 258 VLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRER 317
V+ +++ G+ P + D R ++ + + S E L + L+ +P++R
Sbjct: 194 VMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRTLSPE----AKSLLAGLLKKDPKQR 247
Query: 318 PNTK 321
Sbjct: 248 LGGG 251
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.9 bits (227), Expect = 3e-21
Identities = 53/281 (18%), Positives = 96/281 (34%), Gaps = 37/281 (13%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKR 131
V + GE VVYK R +A+KK + P E + +L H
Sbjct: 6 KVEKIGEGTYGVVYKARN---KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE 191
+ L+ ++ LV E++ D L K + I + + + L +C S
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 192 GRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGR 245
+ H DL +L + G +L+ FGL + T+ P L
Sbjct: 121 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 246 VTPESVIFSFGTVLLDLLSGKHI-PPSHALDMIR--GKNILHLMDSHLEGNFSSEEATVV 302
+ I+S G + ++++ + + P +D + + + + G S +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 303 F--------------------DLASRCLQYEPRERPNTKDL 323
F L S+ L Y+P +R + K
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.2 bits (228), Expect = 6e-21
Identities = 58/278 (20%), Positives = 93/278 (33%), Gaps = 51/278 (18%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VVY+ +L D+ +A+KK + D + E + KL H + L + E
Sbjct: 35 VVYQAKL---CDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 145 R------LLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ LV +Y+P + QT+ + +L Y S G + H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICH 145
Query: 198 -DLNAYRVLFDENG-DPRLSCFGLMKNSRDGKSYSTNLAYT----PPEYLRNGRVTPESV 251
D+ +L D + +L FG K G+ + + P T
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 205
Query: 252 IFSFGTVLLDLLSGKHIPPSH-----------ALDMIRGKNILHLMDSHLEGNFS----- 295
++S G VL +LL G+ I P L + I + ++ E F
Sbjct: 206 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 265
Query: 296 ----------SEEATVVFDLASRCLQYEPRERPNTKDL 323
EA L SR L+Y P R +
Sbjct: 266 PWTKVFRPRTPPEA---IALCSRLLEYTPTARLTPLEA 300
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.4 bits (226), Expect = 8e-21
Identities = 47/295 (15%), Positives = 104/295 (35%), Gaps = 48/295 (16%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKH--AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V DG + +A+KK + + K+ E + +RH+ + L+
Sbjct: 33 AVCSAV--DGRTGAK-VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD 89
Query: 143 D------ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+ + LV +M D +++ + + + + L Y + G +
Sbjct: 90 ETLDDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-H 144
Query: 197 HDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNG-RVTPESVIFS 254
DL + +E+ + ++ FGL + + Y Y PE + N R T I+S
Sbjct: 145 RDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWS 204
Query: 255 FGTVLLDLLSGKHI-------------------PPSHALDMIRGKNILHLMDSHLE---- 291
G ++ ++++GK + PP+ + ++ + M E
Sbjct: 205 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 264
Query: 292 --GNFSSEEATVVFDLASRCLQYEPRERPNTKDL-----VSTLAPLQNRPDVPSY 339
+ + + + +L + L + +R + +L ++ P V Y
Sbjct: 265 DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKY 319
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 90.3 bits (223), Expect = 9e-21
Identities = 35/268 (13%), Positives = 72/268 (26%), Gaps = 27/268 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR-LANLIGYCCDGD 143
V+++G N + +A+K + + D Q DE L + N+ + +G
Sbjct: 20 VIFEGTNLL---NNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL 74
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
+LV + + L + A + + + +Y D+
Sbjct: 75 HNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDN 131
Query: 204 VLFDE-----NGDPRLSCFGLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVT 247
L + FG++K RD + Y +
Sbjct: 132 FLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQS 191
Query: 248 PESVIFSFGTVLLDLLSGKHIPP--SHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305
+ + G V + L G A + + + I S + +
Sbjct: 192 RRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKY 251
Query: 306 ASRCLQYEPRERPNTKDLVSTLAPLQNR 333
P+ L + + R
Sbjct: 252 MHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.0 bits (217), Expect = 9e-20
Identities = 56/287 (19%), Positives = 93/287 (32%), Gaps = 57/287 (19%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V+K R + + +A+KK + P E + L+H+ + NLI C
Sbjct: 25 EVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 81
Query: 143 DER--------LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
LV ++ +D T+ RV + L Y
Sbjct: 82 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLYYIHRNKI- 138
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--------LAYTPPEYLRNGR- 245
L+ D+ A VL +G +L+ FGL + K+ N L Y PPE L R
Sbjct: 139 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERD 198
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPS----HALDMIR----------------------- 278
P ++ G ++ ++ + I H L +I
Sbjct: 199 YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL 258
Query: 279 --GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
K + L+ A DL + L +P +R ++ D
Sbjct: 259 ELVKGQKRKVKDRLKAYVRDPYA---LDLIDKLLVLDPAQRIDSDDA 302
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.3 bits (215), Expect = 9e-20
Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 37/270 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V+K + + +A+K+ + P E + +L+HK + L
Sbjct: 17 TVFKAKN---RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD 73
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+ LV E+ D F N ++ + + + L +C S L+ DL
Sbjct: 74 KKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQ 130
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT-----PPEYLRNGRVTPESVIFSFGT 257
+L + NG+ +L+ FGL + + T P + ++S G
Sbjct: 131 NLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC 190
Query: 258 VLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-------------- 303
+ +L + + K I L+ + E + S +
Sbjct: 191 IFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVN 250
Query: 304 ----------DLASRCLQYEPRERPNTKDL 323
DL L+ P +R + ++
Sbjct: 251 VVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.2 bits (215), Expect = 2e-19
Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 18/254 (7%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCCD 141
V + ++ + A+K K KQ +E + + L L D
Sbjct: 56 RVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
+V EY+ + HL A I +Y S +Y DL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDL-IYRDLKP 169
Query: 202 YRVLFDENGDPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLL 260
+L D+ G +++ FG K + + PE + + ++ G ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229
Query: 261 DLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 320
++ +G PP A I+ + +FSS+ + DL LQ + +R
Sbjct: 230 EMAAGY--PPFFADQPIQIYEKIVSGKVRFPSHFSSD----LKDLLRNLLQVDLTKRF-- 281
Query: 321 KDLVSTLAPLQNRP 334
+L + + ++N
Sbjct: 282 GNLKNGVNDIKNHK 295
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.6 bits (203), Expect = 5e-18
Identities = 51/246 (20%), Positives = 86/246 (34%), Gaps = 17/246 (6%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD----PKQFADEAWGVGKLRHKR-LANLIGYC 139
V+ R G+D + A+K K + E + +R L L
Sbjct: 39 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 98
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199
+ L+ +Y+ L HL E T I AL++ G +Y D+
Sbjct: 99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQ--IYVGEIVLALEHLHKLG-IIYRDI 155
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-----NLAYTPPEYLRNGR--VTPESVI 252
+L D NG L+ FGL K ++ + Y P+ +R G
Sbjct: 156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 215
Query: 253 FSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 312
+S G ++ +LL+G P + + E + E + + DL R L
Sbjct: 216 WSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 313 EPRERP 318
+P++R
Sbjct: 274 DPKKRL 279
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.0 bits (178), Expect = 1e-14
Identities = 44/281 (15%), Positives = 84/281 (29%), Gaps = 35/281 (12%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH--AWPDPKQFADEAWGVGKLRHKR 131
+S G A V +AVKK ++ + K+ E + ++H+
Sbjct: 22 NLSPVGSGAYGSVCAAFD---TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCS 189
+ L+ + L + + Q + + I L Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGL--MKNSRDGKSYSTNLAYTPPEYLRNGRVT 247
S + DL + +E+ + ++ FGL + +T P L
Sbjct: 139 SADII-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 248 PESVIFSFGTVLLDLLSGKHIPP--SHALDMIRGKNILHLMDSHLEGNFSSEEATVVF-- 303
I+S G ++ +LL+G+ + P H + ++ + L SSE A
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 304 ---------------------DLASRCLQYEPRERPNTKDL 323
DL + L + +R
Sbjct: 258 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 70.6 bits (172), Expect = 6e-14
Identities = 47/279 (16%), Positives = 86/279 (30%), Gaps = 52/279 (18%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGD 143
V++ N + VK K+ E + LR + L D
Sbjct: 50 EVFEAINITNN---EKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV 103
Query: 144 ERL--LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
R LV E++ N + QT+ I +ALDYC S G + D+
Sbjct: 104 SRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKP 157
Query: 202 YRVLFD-ENGDPRLSCFGLMKNSRDGKSYS----TNLAYTPPEYLRNGRVTPESVIFSFG 256
+ V+ D E+ RL +GL + G+ Y+ + P + ++S G
Sbjct: 158 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 217
Query: 257 TVLLDLLSGKH--------------------------------IPPSHALDMIRGKNILH 284
+L ++ K I + I G++
Sbjct: 218 CMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK 277
Query: 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 323
+ + + D + L+Y+ + R ++
Sbjct: 278 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.1 bits (170), Expect = 1e-13
Identities = 41/302 (13%), Positives = 86/302 (28%), Gaps = 67/302 (22%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ + N +A+K + DE + ++ +
Sbjct: 28 TVWLAKDMVNN---THVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL 83
Query: 145 RLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSS 190
+LL + +E ++ I +++ + LDY
Sbjct: 84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR 143
Query: 191 EGRPLYHDLNAYRVLFDENGDP------RLSCFGLMKNSRDGKSYS-TNLAYTPPEYLRN 243
++ D+ VL + P +++ G + + S Y PE L
Sbjct: 144 RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG 203
Query: 244 GRVTPESVIFSFGTVLLDLLSGKHI-PPSHALDMIRGKNILHLMDSHL------------ 290
+ I+S ++ +L++G + P + + + + L
Sbjct: 204 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 263
Query: 291 -----------------------------EGNFSSEEATVVFDLASRCLQYEPRERPNTK 321
+ FS +EA + D S LQ +PR+R +
Sbjct: 264 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323
Query: 322 DL 323
L
Sbjct: 324 GL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.3 bits (163), Expect = 9e-13
Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 56/297 (18%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKR 131
+ G A +V R +A+KK ++ K+ E + + HK
Sbjct: 21 NLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 132 LANLIGYCC------DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEAL 185
+ +L+ + + LV E M + + + + +
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGI 132
Query: 186 DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLR 242
+ S ++ DL ++ + ++ FGL + + + Y PE +
Sbjct: 133 KHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 243 NGRVTPESVIFSFGTVLLDLLSGKH---------------------IPPSHALDMIRGKN 281
I+S G ++ +++ K P +N
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 282 ILHLMDSHLEGNFSSEEATVVF---------------DLASRCLQYEPRERPNTKDL 323
+ + F +F DL S+ L +P +R + D
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.1 bits (121), Expect = 4e-08
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 464
E +++G+ F +++ A CY + I + Y R+LC+L QP+ AL D +A
Sbjct: 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRA 64
Query: 465 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+ A + +++ + +A L+ A SL
Sbjct: 65 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (89), Expect = 2e-04
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 464
E +++G+ A A+ CYS+ I + RS + A D +
Sbjct: 5 ELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYS-NRSAAYAKKGDYQKAYEDGCKT 63
Query: 465 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 502
+ PDW + +A AL L+ ++A +E E
Sbjct: 64 VDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 512 | |||
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.9 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.79 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.78 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.75 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.74 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.72 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.7 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.67 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.63 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.63 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.62 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.61 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.57 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.54 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.52 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.52 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.47 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.47 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.4 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.38 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.37 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.32 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.24 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.22 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.21 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.21 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.21 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.18 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.17 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.14 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.14 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.12 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.12 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.09 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 98.98 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.97 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.9 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.85 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.82 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.81 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.73 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.7 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.66 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.63 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.6 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.47 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.46 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.43 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.42 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.18 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.17 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.14 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.14 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.1 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.1 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.9 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.86 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.68 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.47 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.32 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.12 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.61 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 88.22 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 85.99 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 80.87 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.6e-57 Score=430.76 Aligned_cols=255 Identities=20% Similarity=0.319 Sum_probs=219.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.+++.||+|+||+||+|.+.. +++.||||+++.+. ...++|.+|+.+|++++|||||+++++|.+++..+|||
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~ 92 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 92 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGG---GTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECC---CCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence 456678899999999999999987 78899999997654 35678999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC--
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-- 227 (512)
|||++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~ 171 (287)
T d1opja_ 93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171 (287)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE
T ss_pred ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCce
Confidence 9999999999998766778999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...||+.|+|||++.+..++.++|||||||++|||++|+.||+.... ...+...+........+..+++.+.+
T Consensus 172 ~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~l~~ 247 (287)
T d1opja_ 172 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELLEKDYRMERPEGCPEKVYE 247 (287)
T ss_dssp EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC----HHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch----HHHHHHHHhcCCCCCCCccchHHHHH
Confidence 23468899999999999999999999999999999998877654321 11222333334445566677788999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 248 li~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 248 LMRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999887643
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-57 Score=436.89 Aligned_cols=271 Identities=20% Similarity=0.296 Sum_probs=213.9
Q ss_pred ccCHHHHHHHhcCCCc------ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCC
Q 010340 56 EFSLADLRAATNNFSS------DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLR 128 (512)
Q Consensus 56 ~~~~~~~~~~~~~f~~------~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~ 128 (512)
.++++++..++.+|+. +.+.+.||+|+||.||+|.++.++.....||||++....... .+.|.+|+++|++++
T Consensus 6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 85 (299)
T d1jpaa_ 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 85 (299)
T ss_dssp GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC
Confidence 4567777788877743 445678999999999999987643344579999987644322 357999999999999
Q ss_pred CCCccceEEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC
Q 010340 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (512)
Q Consensus 129 h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~ 208 (512)
|||||+++|+|.+.+..+||||||++|+|.+++.. ..+.+++.+++.|+.||+.||.|||+++ |+||||||+|||++.
T Consensus 86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~ 163 (299)
T d1jpaa_ 86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNS 163 (299)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECT
T ss_pred CCCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECC
Confidence 99999999999999999999999999999998864 4567999999999999999999999999 999999999999999
Q ss_pred CCCCeeecccCccccCCCC---------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHh
Q 010340 209 NGDPRLSCFGLMKNSRDGK---------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIR 278 (512)
Q Consensus 209 ~~~~kl~Dfg~a~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~ 278 (512)
++++||+|||+++...... ...+|+.|||||++.++.++.++|||||||++|||+| |+.||......
T Consensus 164 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--- 240 (299)
T d1jpaa_ 164 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--- 240 (299)
T ss_dssp TCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---
T ss_pred CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH---
Confidence 9999999999998654321 2346889999999999999999999999999999998 77666543211
Q ss_pred ccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 279 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.+...+........+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 241 --~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 241 --DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp --HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence 12222223333445666778899999999999999999999999999987654
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-56 Score=426.85 Aligned_cols=246 Identities=16% Similarity=0.257 Sum_probs=211.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.+++.||+|+||.||+|.+.. +++.||||++........+.+.+|+.+|++++|||||++++++.+.+.++||||
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 97 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEecCcCcEEEEEEECC---CCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence 47789999999999999999987 788999999987766667889999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC----
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---- 226 (512)
||+||+|.+++.+ +.+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 y~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 173 (293)
T d1yhwa1 98 YLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (293)
T ss_dssp CCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred ecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeeccccccc
Confidence 9999999998853 46999999999999999999999999 999999999999999999999999999875432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc-ccccCCCCCHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM-DSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 305 (512)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||........ ...+. ........+...++.+.+|
T Consensus 174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~l 249 (293)
T d1yhwa1 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----LYLIATNGTPELQNPEKLSAIFRDF 249 (293)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHHCSCCCSSGGGSCHHHHHH
T ss_pred cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH----HHHHHhCCCCCCCCcccCCHHHHHH
Confidence 345799999999999999999999999999999999999988754321111 11111 1111223345667789999
Q ss_pred HHHhhccCCCCCCChHHHHHHh
Q 010340 306 ASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L 327 (512)
|.+||+.||.+|||+.++++|-
T Consensus 250 i~~~L~~dP~~R~s~~eil~Hp 271 (293)
T d1yhwa1 250 LNRCLDMDVEKRGSAKELLQHQ 271 (293)
T ss_dssp HHHHTCSSTTTSCCHHHHTTCG
T ss_pred HHHHccCChhHCcCHHHHhcCH
Confidence 9999999999999999998873
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-56 Score=422.43 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=204.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.+++.||+|+||.||+|.+. ++..||||+++... ...++|.+|++++++++|||||+++|+|.+++..+|||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~ 79 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 79 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET----TTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC----CCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEE
Confidence 45678889999999999999987 45679999998654 34578999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 80 E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 157 (263)
T d1sm2a_ 80 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157 (263)
T ss_dssp ECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred EecCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCce
Confidence 99999999999864 4567899999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....||+.|+|||++.+..++.++|||||||++|||+|++.|++..... ..+...+........|..+++.+.+
T Consensus 158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~----~~~~~~i~~~~~~~~p~~~~~~l~~ 233 (263)
T d1sm2a_ 158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTHVYQ 233 (263)
T ss_dssp -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH----HHHHHHHHHTCCCCCCTTSCHHHHH
T ss_pred eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH----HHHHHHHHhcCCCCCccccCHHHHH
Confidence 2346789999999999999999999999999999999976565433211 1112222223334445566778999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
|+.+||+.||++|||+++|+++|+.++
T Consensus 234 li~~cl~~~p~~Rps~~~il~~L~~i~ 260 (263)
T d1sm2a_ 234 IMNHCWKERPEDRPAFSRLLRQLAEIA 260 (263)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 999999999999999999999999875
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-56 Score=424.43 Aligned_cols=248 Identities=19% Similarity=0.167 Sum_probs=204.5
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+|.+++.||+|+||.||+|+++. +++.||||++...... ..+.+.+|+.+|++++|||||++++++.+++..+|||
T Consensus 6 dy~~~~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm 82 (271)
T d1nvra_ 6 DWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 82 (271)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence 56788999999999999999987 7889999999765432 3467999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~---- 225 (512)
|||+||+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 83 Ey~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~ 159 (271)
T d1nvra_ 83 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159 (271)
T ss_dssp ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred eccCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCcc
Confidence 9999999999996 5668999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 226 --GKSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
....+||+.|||||++.+..+ +.++|||||||++|||+||+.||........ ..................++.+
T Consensus 160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~ 236 (271)
T d1nvra_ 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPWKKIDSAP 236 (271)
T ss_dssp CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH---HHHHHHTTCTTSTTGGGSCHHH
T ss_pred ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH---HHHHHhcCCCCCCccccCCHHH
Confidence 234679999999999988776 5789999999999999999988754321110 0111111111112224456778
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHh
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.+|+.+||+.||++|||++++++|-
T Consensus 237 ~~li~~~L~~dP~~R~t~~eil~hp 261 (271)
T d1nvra_ 237 LALLHKILVENPSARITIPDIKKDR 261 (271)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred HHHHHHHcCCChhHCcCHHHHhcCH
Confidence 8999999999999999999998763
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-56 Score=419.67 Aligned_cols=245 Identities=22% Similarity=0.296 Sum_probs=209.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
+|.+++.||+|+||.||+|+++. +++.||||++.+.. ....+.+.+|+.+|+.++|||||++++++.+++.++|
T Consensus 7 dy~i~~~iG~G~fg~Vy~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i 83 (263)
T d2j4za1 7 DFEIGRPLGKGKFGNVYLAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 83 (263)
T ss_dssp GEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HeEEEEEEecCCCcEEEEEEECC---CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEE
Confidence 57788999999999999999987 78899999987432 2335679999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
|||||++|+|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 vmEy~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~ 160 (263)
T d2j4za1 84 ILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 160 (263)
T ss_dssp EEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC
T ss_pred EEeecCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCc
Confidence 999999999999997 3457999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....||+.|||||++.+..++.++|||||||++|||+||+.||......... ..+.. ....++...++.+.+|
T Consensus 161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~----~~i~~--~~~~~p~~~s~~~~~l 234 (263)
T d2j4za1 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY----KRISR--VEFTFPDFVTEGARDL 234 (263)
T ss_dssp CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHT--TCCCCCTTSCHHHHHH
T ss_pred ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHH----HHHHc--CCCCCCccCCHHHHHH
Confidence 3457899999999999999999999999999999999999887643221111 11111 1223455567789999
Q ss_pred HHHhhccCCCCCCChHHHHHHh
Q 010340 306 ASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L 327 (512)
+.+||+.||++|||+.++++|-
T Consensus 235 i~~~L~~dp~~R~t~~eil~hp 256 (263)
T d2j4za1 235 ISRLLKHNPSQRPMLREVLEHP 256 (263)
T ss_dssp HHHHTCSSGGGSCCHHHHHTCH
T ss_pred HHHHccCCHhHCcCHHHHHcCc
Confidence 9999999999999999999863
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-56 Score=421.95 Aligned_cols=256 Identities=20% Similarity=0.251 Sum_probs=203.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
++++.+++.||+|+||.||+|++.. .||||+++...... .+.|.+|+.+|++++|||||++++++.+ +.++
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~ 79 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLA 79 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS------EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC------EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEE
Confidence 3456778889999999999998642 39999997654322 4679999999999999999999998865 5689
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
||||||++|+|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 80 lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 80 IVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp EEEECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred EEEecCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeecccc
Confidence 99999999999999964 4567999999999999999999999999 999999999999999999999999999765432
Q ss_pred ------CccccCcccCCcccccC---CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 227 ------KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
....||+.|||||++.+ ..++.++|||||||++|||+||+.||............+..-.........+..
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 237 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTT
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhcccc
Confidence 24578999999999964 348999999999999999999998875421111110111111111111123445
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
+++.+.+|+.+||+.||.+|||+.+|+++|+.++++
T Consensus 238 ~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 238 CPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 667899999999999999999999999999988643
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.1e-56 Score=425.98 Aligned_cols=247 Identities=19% Similarity=0.203 Sum_probs=209.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---hHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
|.++++||+|+||.||+|++.. +++.||||++......+. +.+.+|+.+|++++|||||++++++.+.+..+||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 93 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEeeEEEecCCCeEEEEEEECC---CCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence 5678899999999999999987 889999999986654332 4688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCCc
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 228 (512)
||||++|+|..++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 94 ~E~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~ 170 (309)
T d1u5ra_ 94 MEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 170 (309)
T ss_dssp EECCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred EEecCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCc
Confidence 99999999987665 4567999999999999999999999999 99999999999999999999999999998877778
Q ss_pred cccCcccCCcccccC---CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
..||+.|||||++.+ +.|+.++|||||||++|||++|+.||........ +..+.........+...++.+.+|
T Consensus 171 ~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~s~~~~~l 246 (309)
T d1u5ra_ 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPALQSGHWSEYFRNF 246 (309)
T ss_dssp CCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSCTTSCHHHHHH
T ss_pred cccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCCCCCCCCCCCCHHHHHH
Confidence 899999999999864 4589999999999999999999988754321111 111111112222234456779999
Q ss_pred HHHhhccCCCCCCChHHHHHHhc
Q 010340 306 ASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 306 i~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
|.+||+.||.+|||+.++++|-.
T Consensus 247 i~~~L~~dP~~Rpt~~ell~Hp~ 269 (309)
T d1u5ra_ 247 VDSCLQKIPQDRPTSEVLLKHRF 269 (309)
T ss_dssp HHHHTCSSGGGSCCHHHHTTCHH
T ss_pred HHHHCcCChhHCcCHHHHHhCHH
Confidence 99999999999999999988743
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-56 Score=420.66 Aligned_cols=250 Identities=22% Similarity=0.332 Sum_probs=209.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.+++.||+|+||.||+|.++ +++.||||+++... ...+.|.+|+.+|++++|||||+++|++.+ +..+|||
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~ 86 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHeEEeEEEecCCCcEEEEEEEC----CCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence 45678889999999999999986 56779999997654 346789999999999999999999998865 5679999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~ 165 (272)
T d1qpca_ 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (272)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCccc
Confidence 9999999999886545557999999999999999999999999 999999999999999999999999999876543
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....||+.|||||++.++.++.++|||||||++|||+||+.|++...... .+...+........+..+++.+.+
T Consensus 166 ~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~----~~~~~i~~~~~~~~p~~~~~~l~~ 241 (272)
T d1qpca_ 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYRMVRPDNCPEELYQ 241 (272)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH----HHHHHHHhcCCCCCcccChHHHHH
Confidence 23467899999999998899999999999999999999876665432111 111222223334445566778999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccc
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
|+.+||+.||++|||+.+|++.|+.+
T Consensus 242 li~~cl~~~P~~Rpt~~ei~~~L~~~ 267 (272)
T d1qpca_ 242 LMRLCWKERPEDRPTFDYLRSVLEDF 267 (272)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence 99999999999999999999988764
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-56 Score=422.46 Aligned_cols=246 Identities=17% Similarity=0.204 Sum_probs=208.1
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEc
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
|.+++.||+|+||.||+|++.. +++.||||++........+.+.+|+++|++++|||||++++++.+.+..+|||||
T Consensus 14 Y~i~~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy 90 (288)
T d2jfla1 14 WEIIGELGDGAFGKVYKAQNKE---TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 90 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEeEEEeeCCCcEEEEEEECC---CCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence 6788999999999999999987 7889999999876655567899999999999999999999999999999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC----CC
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GK 227 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~----~~ 227 (512)
|+||+|.+++.+ ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 91 ~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~ 168 (288)
T d2jfla1 91 CAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 168 (288)
T ss_dssp CTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHT
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccc
Confidence 999999999864 3567999999999999999999999999 99999999999999999999999999875432 23
Q ss_pred ccccCcccCCccccc-----CCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc-ccCCCCCHHHHHH
Q 010340 228 SYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS-HLEGNFSSEEATV 301 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 301 (512)
...||+.|+|||++. +..|+.++|||||||++|||+||+.||....... ....+... ......+...++.
T Consensus 169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~s~~ 244 (288)
T d2jfla1 169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR----VLLKIAKSEPPTLAQPSRWSSN 244 (288)
T ss_dssp CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HHHHHHHSCCCCCSSGGGSCHH
T ss_pred ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH----HHHHHHcCCCCCCCccccCCHH
Confidence 567999999999984 4558999999999999999999998865431111 11111111 1112234566778
Q ss_pred HHHHHHHhhccCCCCCCChHHHHHH
Q 010340 302 VFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+.+||.+||+.||++|||+.++++|
T Consensus 245 ~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 245 FKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999999887
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-56 Score=419.59 Aligned_cols=249 Identities=18% Similarity=0.225 Sum_probs=198.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee--CCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD--GDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 145 (512)
.+|.+++.||+|+||.||+|+++. +++.||||++....... .+.+.+|+++|++++|||||++++++.+ .+.+
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~ 80 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 80 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CE
T ss_pred hhCEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEE
Confidence 357789999999999999999987 78899999998765432 3468999999999999999999999965 4568
Q ss_pred EEEEEccCCCCHHhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC----CccccccCccceeecCCCCCeeecccC
Q 010340 146 LLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEG----RPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
+||||||+||+|.+++... ....+++..++.++.||+.||.|||+.+ +||||||||+|||++.++.+||+|||+
T Consensus 81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~ 160 (269)
T d2java1 81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 160 (269)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHH
T ss_pred EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccc
Confidence 9999999999999998642 3567999999999999999999999854 399999999999999999999999999
Q ss_pred ccccCCC----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC
Q 010340 220 MKNSRDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS 295 (512)
Q Consensus 220 a~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (512)
++..... ....||+.|||||++.+..++.++|||||||++|||+||+.||........ ...+.......++
T Consensus 161 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~-----~~~i~~~~~~~~~ 235 (269)
T d2java1 161 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-----AGKIREGKFRRIP 235 (269)
T ss_dssp HHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-----HHHHHHTCCCCCC
T ss_pred eeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHH-----HHHHHcCCCCCCC
Confidence 9875432 346789999999999999999999999999999999999988764322211 1111111222345
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 296 SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...++++.+|+.+||+.||.+|||+.++++|
T Consensus 236 ~~~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 236 YRYSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 5667789999999999999999999999876
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-55 Score=426.92 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=204.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+|.+++.||+|+||+||+|.+.. +++.||||+++...... .+.+.+|+.+|++++|||||+++++|.+.+.++|||
T Consensus 7 ~y~~~~~iG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm 83 (322)
T d1s9ja_ 7 DFEKISELGAGNGGVVFKVSHKP---SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 83 (322)
T ss_dssp GEEEEEEEECCSSCCEEEEEETT---TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46688999999999999999987 88999999998654333 457999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCccccccCccceeecCCCCCeeecccCccccCC--C
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--G 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~--~ 226 (512)
||++||+|.+++.+ .+.+++..+..++.||+.||.|||++ + |+||||||+|||++.++.+||+|||+|+...+ .
T Consensus 84 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 160 (322)
T d1s9ja_ 84 EHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160 (322)
T ss_dssp ECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC
T ss_pred EcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCcc
Confidence 99999999999973 45799999999999999999999974 7 99999999999999999999999999986432 3
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc---cc----------------------
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG---KN---------------------- 281 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~---~~---------------------- 281 (512)
.+.+||+.|+|||++.+..|+.++|||||||++|||+||+.||.......... ..
T Consensus 161 ~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (322)
T d1s9ja_ 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240 (322)
T ss_dssp ---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------------
T ss_pred ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccc
Confidence 46789999999999999999999999999999999999998876431110000 00
Q ss_pred ---------hhhhccc---ccCCCCC-HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 282 ---------ILHLMDS---HLEGNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 282 ---------~~~~~~~---~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
..+.... ...+..+ ...+.++.+|+.+||..||.+|||++++++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp -----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0000000 0000111 1235678899999999999999999999987
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-56 Score=421.55 Aligned_cols=259 Identities=19% Similarity=0.188 Sum_probs=212.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
++|.+++.||+|+||.||+|.++. +++.||||++.+.. ....+.+.+|+++|++++|||||++++++.+.+.++
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 84 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELA---TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY 84 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEE
Confidence 357788999999999999999987 78899999987532 234567999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
||||||+||+|.+++. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ivmEy~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~ 161 (288)
T d1uu3a_ 85 FGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 161 (288)
T ss_dssp EEECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEEEccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccC
Confidence 9999999999999987 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 227 ------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
....||+.|+|||++.+..++.++|||||||++|||+||+.||......... ..+.. ....++...++
T Consensus 162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~----~~i~~--~~~~~p~~~s~ 235 (288)
T d1uu3a_ 162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF----QKIIK--LEYDFPEKFFP 235 (288)
T ss_dssp --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHT--TCCCCCTTCCH
T ss_pred CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHH----HHHHc--CCCCCCccCCH
Confidence 2457999999999999999999999999999999999999887643221111 11111 11234556677
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccCCCCCCcccc
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVM 341 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~~~~~~~~~ 341 (512)
.+.+||.+||+.||.+|||++|++++.+ ++..|.+....|
T Consensus 236 ~~~~li~~~L~~dP~~R~t~~e~~~~~~-i~~Hpff~~i~w 275 (288)
T d1uu3a_ 236 KARDLVEKLLVLDATKRLGCEEMEGYGP-LKAHPFFESVTW 275 (288)
T ss_dssp HHHHHHHTTSCSSGGGSTTSGGGTCHHH-HHTSGGGTTCCC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHcCCHH-HHcCCccCCCCH
Confidence 8999999999999999999999766533 334444433333
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.6e-55 Score=419.47 Aligned_cols=247 Identities=17% Similarity=0.211 Sum_probs=193.7
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
|.+++.||+|+||.||+|.++. +++.||||++....... ...+.+|+.+|++++|||||++++++.+++.++||||
T Consensus 11 Y~~~~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 11 YDFRDVLGTGAFSEVILAEDKR---TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp EEEEEESBSGGGGGEEEEEETT---TCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEeeccCeEEEEEEECC---CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6788899999999999999987 78899999998654332 3568899999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec---CCCCCeeecccCccccCCC-
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~~- 226 (512)
||+||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||+. .++.+||+|||+++.....
T Consensus 88 ~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~ 164 (307)
T d1a06a_ 88 LVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 164 (307)
T ss_dssp CCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred ccCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence 999999999997 5678999999999999999999999999 99999999999994 5789999999999865443
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...+||+.|||||++.+..++.++|||||||++|||+||+.||........... +.. .........+...++.+.+
T Consensus 165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~-i~~-~~~~~~~~~~~~~s~~~~~ 242 (307)
T d1a06a_ 165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ-ILK-AEYEFDSPYWDDISDSAKD 242 (307)
T ss_dssp --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHT-TCCCCCTTTTTTSCHHHHH
T ss_pred eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHH-Hhc-cCCCCCCccccCCCHHHHH
Confidence 346799999999999999999999999999999999999988765422211111 110 0111122233456778999
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 010340 305 LASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~ 326 (512)
||.+||+.||++|||+.|+++|
T Consensus 243 li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 243 FIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCCHhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-54 Score=406.16 Aligned_cols=249 Identities=23% Similarity=0.332 Sum_probs=210.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+++.+++.||+|+||+||+|+++ +++.||||+++.... ..++|.+|+.++++++|||||+++|+|.+.+.+++||
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~ 78 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 78 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET----TTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC----CCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Confidence 34568899999999999999986 677899999987553 4678999999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++|+|.+++.. ....+++..+++|+.||++||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 79 Ey~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 156 (258)
T d1k2pa_ 79 EYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156 (258)
T ss_dssp ECCTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC
T ss_pred EccCCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCce
Confidence 99999999999764 4567899999999999999999999999 999999999999999999999999999764432
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... +...+........|..+++.+.
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~ 231 (258)
T d1k2pa_ 157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----TAEHIAQGLRLYRPHLASEKVY 231 (258)
T ss_dssp CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-----HHHHHHTTCCCCCCTTCCHHHH
T ss_pred eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH-----HHHHHHhCCCCCCcccccHHHH
Confidence 23567899999999999999999999999999999998 676654332211 1122222333445566677899
Q ss_pred HHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 304 DLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+||.+||+.||++|||+.+++++|..+
T Consensus 232 ~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 232 TIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred HHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 999999999999999999999998653
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-55 Score=413.73 Aligned_cols=243 Identities=21% Similarity=0.269 Sum_probs=200.4
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 154 (512)
+||+|+||.||+|.+.... +++.||||+++...... .+.|.+|+++|++++|||||+++|+|.. +..+|||||+++
T Consensus 14 ~iG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 14 ELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEECSSEEEEEEEEECSS-SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CcccCCCeEEEEEEEccCC-cCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 5899999999999876533 57889999997654332 3579999999999999999999999965 457899999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-------C
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------K 227 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-------~ 227 (512)
|+|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 92 g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 99999997 4567999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
...||+.|||||++.+..++.++|||||||++|||+| |+.||..... ..+...+........+..+++.+.+|+
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~~~~li 243 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGERMGCPAGCPREMYDLM 243 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCcccCHHHHHHH
Confidence 3457899999999999999999999999999999998 7876653211 112222333334455667778899999
Q ss_pred HHhhccCCCCCCChHHHHHHhcc
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAP 329 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~ 329 (512)
.+||+.||++|||+++|++.|+.
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~ 266 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRN 266 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhC
Confidence 99999999999999999887764
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-55 Score=414.77 Aligned_cols=245 Identities=20% Similarity=0.262 Sum_probs=203.1
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEEccCCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 155 (512)
+||+|+||.||+|.++... ++..||||+++..... ..+.|.+|+++|++++|||||+++|+|.+ +.++||||||++|
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~-~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g 93 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 93 (285)
T ss_dssp EEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred EEecccCeEEEEEEEecCC-CcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCC
Confidence 4899999999999886533 5668999999765432 24679999999999999999999999865 4689999999999
Q ss_pred CHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-------Cc
Q 010340 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------KS 228 (512)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-------~~ 228 (512)
+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 94 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~ 171 (285)
T d1u59a_ 94 PLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 171 (285)
T ss_dssp EHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred cHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence 99999853 4567999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
..||+.|+|||++.++.++.++|||||||++|||+| |+.||..... ..+...+........|..+++++.+||.
T Consensus 172 ~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~ 246 (285)
T d1u59a_ 172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPPELYALMS 246 (285)
T ss_dssp SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred cccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 457889999999998999999999999999999998 7877653211 1122223333344566677888999999
Q ss_pred HhhccCCCCCCChHHHHHHhccc
Q 010340 308 RCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+||+.||++|||+.+|++.|+..
T Consensus 247 ~cl~~~p~~RPs~~~i~~~L~~~ 269 (285)
T d1u59a_ 247 DCWIYKWEDRPDFLTVEQRMRAC 269 (285)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHHHHH
Confidence 99999999999999999988754
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-54 Score=413.51 Aligned_cols=256 Identities=22% Similarity=0.294 Sum_probs=207.3
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCC-CceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
+.+.+.||+|+||.||+|.++.+.. ....||||+++...... ...|.+|+.+|++++|||||+++|+|.+.+..++||
T Consensus 9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~ 88 (283)
T d1mqba_ 9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 88 (283)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEE
Confidence 4456678999999999999876321 23579999997644322 346899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+.+|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 89 e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~ 166 (283)
T d1mqba_ 89 EYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 166 (283)
T ss_dssp ECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred EecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCcc
Confidence 99999999998864 5567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
....||+.|||||++.++.++.++|||||||++|||+||+.|++..... ..+...+........+..++..+
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~l 242 (283)
T d1mqba_ 167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDGFRLPTPMDCPSAI 242 (283)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTTCCCCCCTTCBHHH
T ss_pred ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH----HHHHHHHhccCCCCCchhhHHHH
Confidence 1235789999999999999999999999999999999987776543211 12223333344455666677889
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhccccCC
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 243 ~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 243 YQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999887654
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-54 Score=407.73 Aligned_cols=244 Identities=17% Similarity=0.226 Sum_probs=198.0
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee----CCeeEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLL 147 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 147 (512)
+..+||+|+||+||+|.+.. +++.||||++....... .+.|.+|+++|++++|||||+++++|.+ ...++|
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~---~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i 89 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 89 (270)
T ss_dssp EEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eeeEEecCcCcEEEEEEECC---CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence 44578999999999999987 78899999987654322 3568999999999999999999999875 356899
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CccccccCccceeec-CCCCCeeecccCccccCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfg~a~~~~~ 225 (512)
||||+++|+|.+++. ....+++..++.|+.||+.||.|||+++ +|+||||||+|||++ .++.+||+|||+++....
T Consensus 90 vmE~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 90 VTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp EEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEeCCCCCcHHHHHh--ccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 999999999999997 3467999999999999999999999975 499999999999996 578999999999986544
Q ss_pred C--CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHH
Q 010340 226 G--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVF 303 (512)
Q Consensus 226 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (512)
. ....||+.|||||++.+ .++.++|||||||++|||+||+.||........... .+........++...++++.
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~ 243 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEVK 243 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHHH
T ss_pred CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHH---HHHcCCCCcccCccCCHHHH
Confidence 3 35679999999999864 699999999999999999999988753211111011 11111111122333456688
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 010340 304 DLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+||.+||+.||++|||+.|+++|
T Consensus 244 ~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 244 EIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCCHhHCcCHHHHhCC
Confidence 99999999999999999999986
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.6e-54 Score=423.15 Aligned_cols=250 Identities=19% Similarity=0.173 Sum_probs=210.4
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
..|.+++.||+|+||.||+|.+.. +++.||||+++.....+.+.+.+|+.+|++++|||||+++++|.+++.++|||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 105 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKA---TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 105 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECC---CCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 457789999999999999999987 78999999998655444567899999999999999999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec--CCCCCeeecccCccccCCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD--ENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~ 227 (512)
|||+||+|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++......
T Consensus 106 E~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~ 183 (352)
T d1koba_ 106 EFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 183 (352)
T ss_dssp ECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred EcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCC
Confidence 99999999988753 4457999999999999999999999999 99999999999997 67899999999998765543
Q ss_pred ---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
...||+.|+|||++.+..++.++|||||||++|||+||+.||......... ..+.. .............++.+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-~~i~~-~~~~~~~~~~~~~s~~~~~ 261 (352)
T d1koba_ 184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL-QNVKR-CDWEFDEDAFSSVSPEAKD 261 (352)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHH-CCCCCCSSTTTTSCHHHHH
T ss_pred ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHh-CCCCCCcccccCCCHHHHH
Confidence 457899999999999999999999999999999999999887653221111 00110 1111222233456677899
Q ss_pred HHHHhhccCCCCCCChHHHHHH
Q 010340 305 LASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~ 326 (512)
||.+||+.||.+|||+.++++|
T Consensus 262 li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 262 FIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-54 Score=421.05 Aligned_cols=254 Identities=20% Similarity=0.267 Sum_probs=208.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCC--CceEEEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGND--NRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
+++.+++.||+|+||+||+|++..... ....||||++..... .....+.+|+.+|.++ +|||||+++++|.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 356678899999999999999875322 345799999875433 2346799999999998 899999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccce
Q 010340 146 LLVAEYMPNDTLAKHLFHWE---------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Ni 204 (512)
+||||||++|+|.++|+... ...+++..++.|+.||+.||.|||+++ ||||||||+||
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Ni 195 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 195 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhcc
Confidence 99999999999999997432 135899999999999999999999999 99999999999
Q ss_pred eecCCCCCeeecccCccccCCCC------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHH
Q 010340 205 LFDENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMI 277 (512)
Q Consensus 205 ll~~~~~~kl~Dfg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~ 277 (512)
|++.++.+||+|||+|+...... ...||+.|||||++.++.++.++|||||||++|||+| |+.||.....
T Consensus 196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~--- 272 (325)
T d1rjba_ 196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV--- 272 (325)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC---
T ss_pred ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH---
Confidence 99999999999999998654322 3456899999999999999999999999999999998 7877643211
Q ss_pred hccchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 278 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
...+..++........+..+++.+.+||.+||+.||++|||+++|+++|.
T Consensus 273 -~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 273 -DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp -SHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 11122333334445566677788999999999999999999999999985
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.2e-54 Score=422.16 Aligned_cols=247 Identities=18% Similarity=0.170 Sum_probs=209.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 150 (512)
.|.+++.||+|+||.||+|.++. +++.||||++......+.+.+.+|+.+|++++|||||++++++.+.+.++||||
T Consensus 27 ~Y~i~~~lG~G~fg~Vy~~~~~~---~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 103 (350)
T d1koaa2 27 HYDIHEELGTGAFGVVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 103 (350)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred CeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 57788999999999999999987 889999999987654445679999999999999999999999999999999999
Q ss_pred ccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec--CCCCCeeecccCccccCCCC-
Q 010340 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD--ENGDPRLSCFGLMKNSRDGK- 227 (512)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~- 227 (512)
||+||+|.+++.. ..+.+++..++.|+.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++......
T Consensus 104 ~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 181 (350)
T d1koaa2 104 FMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 181 (350)
T ss_dssp CCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred cCCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence 9999999999854 4567999999999999999999999999 99999999999995 46889999999998765433
Q ss_pred --ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc--ccCCCCCHHHHHHHH
Q 010340 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS--HLEGNFSSEEATVVF 303 (512)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 303 (512)
...||+.|||||++.+..++.++|||||||++|||+||+.||........ +..+... ..........++.+.
T Consensus 182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~ 257 (350)
T d1koaa2 182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDGK 257 (350)
T ss_dssp EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCSCCGGGGGCCHHHH
T ss_pred cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHH
Confidence 46789999999999999999999999999999999999988764322111 1111111 111122234567789
Q ss_pred HHHHHhhccCCCCCCChHHHHHH
Q 010340 304 DLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 304 ~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
+||.+||+.||++|||+.++++|
T Consensus 258 ~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 258 DFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHHS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 99999999999999999999998
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-54 Score=409.30 Aligned_cols=252 Identities=24% Similarity=0.340 Sum_probs=208.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 149 (512)
.++.+.+.||+|+||.||+|.+++ ++.||||+++... ...+.|.+|+.+|++++|||||+++|+|.+ +..++||
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~----~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~ 90 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 90 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT----TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECC----CCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEE
Confidence 467788899999999999999874 4569999997654 356789999999999999999999999855 5689999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC---
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~--- 226 (512)
||+++|+|..++.......++|..++.|+.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~ 169 (285)
T d1fmka3 91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 169 (285)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCce
Confidence 9999999999987655667999999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
....||+.|+|||++.++.++.++|||||||++|||+||+.|+....... .+...+........+..+++.+.+
T Consensus 170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~l~~ 245 (285)
T d1fmka3 170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPECPESLHD 245 (285)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHHTTCCCCCCTTSCHHHHH
T ss_pred eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH----HHHHHHHhcCCCCCCcccCHHHHH
Confidence 23567899999999999999999999999999999999877765432211 112222223344556677788999
Q ss_pred HHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 305 LASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 305 li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
||.+||+.||++|||+.+|++.|+....
T Consensus 246 li~~cl~~dP~~Rps~~~i~~~L~~~~~ 273 (285)
T d1fmka3 246 LMCQCWRKEPEERPTFEYLQAFLEDYFT 273 (285)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence 9999999999999999999999987653
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-53 Score=414.73 Aligned_cols=246 Identities=19% Similarity=0.230 Sum_probs=210.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
++|.+++.||+|+||.||+|+++. +++.||||++++.. ....+.+.+|+.+|+.++|||||++++++.+...++
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 81 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccc
Confidence 467789999999999999999987 88999999997542 234577999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+|||||+||+|.+++. ..+.+++..++.++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 82 iv~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~ 158 (337)
T d1o6la_ 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EEEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred cceeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccC
Confidence 9999999999999997 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
...+||+.|+|||++.+..|+.++|||||||++|||++|+.||.......... .+.. ....+|...++.+
T Consensus 159 ~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~----~i~~--~~~~~p~~~s~~~ 232 (337)
T d1o6la_ 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILM--EEIRFPRTLSPEA 232 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHH--CCCCCCTTSCHHH
T ss_pred CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHH----HHhc--CCCCCCccCCHHH
Confidence 34679999999999999999999999999999999999998876543222111 1111 1224456677789
Q ss_pred HHHHHHhhccCCCCCCC-----hHHHHHHh
Q 010340 303 FDLASRCLQYEPRERPN-----TKDLVSTL 327 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps-----~~~vl~~L 327 (512)
.+||.+||++||.+|++ +.++++|-
T Consensus 233 ~dli~~~L~~dP~~R~~~~~~~~~eil~Hp 262 (337)
T d1o6la_ 233 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHHHHhhccCCchhhcccccccHHHHHcCc
Confidence 99999999999999995 78888873
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-54 Score=404.82 Aligned_cols=251 Identities=23% Similarity=0.349 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEee-CCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 148 (512)
+++.+++.||+|+||.||+|.++ ++.||||+++.+. ..+.|.+|++++++++|||||+++|+|.+ .+.++||
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv 79 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 79 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-----TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-----CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEE
Confidence 35667888999999999999984 5679999997643 45789999999999999999999999965 4568999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-C
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-K 227 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~ 227 (512)
|||+++|+|.++|.......+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 80 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~ 158 (262)
T d1byga_ 80 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 158 (262)
T ss_dssp ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCc
Confidence 99999999999997544456999999999999999999999998 999999999999999999999999999875443 3
Q ss_pred ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHHH
Q 010340 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 307 (512)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 307 (512)
...+|+.|+|||++.++.++.++|||||||++|||+|+..||+.. .....+...+.......++...++.+.+|+.
T Consensus 159 ~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~ 234 (262)
T d1byga_ 159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR----IPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 234 (262)
T ss_dssp ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT----SCGGGHHHHHTTTCCCCCCTTCCHHHHHHHH
T ss_pred cccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCC----CCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence 456789999999999999999999999999999999954344332 1122233333334455666777788999999
Q ss_pred HhhccCCCCCCChHHHHHHhccccC
Q 010340 308 RCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 308 ~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
+||+.||.+|||+.+++++|+.++.
T Consensus 235 ~cl~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 235 NCWHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcccCHhHCcCHHHHHHHHHHHHh
Confidence 9999999999999999999988753
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-53 Score=409.25 Aligned_cols=245 Identities=18% Similarity=0.162 Sum_probs=205.6
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC------ChhHHHHHHHHHhcCCCCCccceEEEEeeCCe
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 144 (512)
.|.+++.||+|+||.||+|.++. +++.||||++.+.... ..+.+.+|+.+|++++|||||+++++|.+.+.
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~ 87 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 87 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred CEEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 36788899999999999999987 8899999999754332 24679999999999999999999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC----CCeeecccCc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLM 220 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfg~a 220 (512)
++||||||+||+|.+++.. .+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 88 ~~iv~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 88 VILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp EEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhh
Confidence 9999999999999999973 457999999999999999999999999 99999999999998776 4999999999
Q ss_pred cccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCC--
Q 010340 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFS-- 295 (512)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (512)
+..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||......... ..+... ...++
T Consensus 165 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~----~~i~~~--~~~~~~~ 238 (293)
T d1jksa_ 165 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANVSAV--NYEFEDE 238 (293)
T ss_dssp EECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHTT--CCCCCHH
T ss_pred hhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHH----HHHHhc--CCCCCch
Confidence 876443 3457899999999999989999999999999999999999887643221111 111110 11112
Q ss_pred --HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 296 --SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 296 --~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+..+..+.+||.+||+.||.+|||+.++++|-
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 272 (293)
T d1jksa_ 239 YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272 (293)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred hcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 23456788999999999999999999999873
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.7e-53 Score=408.56 Aligned_cols=245 Identities=21% Similarity=0.255 Sum_probs=210.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
++|.+++.||+|+||+||+|+++. +++.||||++++.. ....+.+.+|+.+|+.++|||||++++++.+.+.++
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 80 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF 80 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECC---CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeee
Confidence 357789999999999999999987 78999999997532 234567999999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+|||||+||+|..++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ivmE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~ 157 (316)
T d1fota_ 81 MIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 157 (316)
T ss_dssp EEECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eEeeecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEeccc
Confidence 9999999999999987 5667899999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHH
Q 010340 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 305 (512)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (512)
....||+.|||||++.+..++.++|||||||++|||+||+.||......... ..+... ...+++..++.+.++
T Consensus 158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~~l 231 (316)
T d1fota_ 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY----EKILNA--ELRFPPFFNEDVKDL 231 (316)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHC--CCCCCTTSCHHHHHH
T ss_pred cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHH----HHHHcC--CCCCCCCCCHHHHHH
Confidence 4568999999999999999999999999999999999999887653221111 111111 123455566778999
Q ss_pred HHHhhccCCCCCC-----ChHHHHHH
Q 010340 306 ASRCLQYEPRERP-----NTKDLVST 326 (512)
Q Consensus 306 i~~cl~~~p~~Rp-----s~~~vl~~ 326 (512)
+.+||..||.+|+ |++++++|
T Consensus 232 i~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 232 LSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHhhhCHHhccccchhhHHHHHcC
Confidence 9999999999996 89999887
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-53 Score=402.88 Aligned_cols=254 Identities=19% Similarity=0.283 Sum_probs=201.0
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
+++.+++.||+|+||.||+|++......+..||||.++...... .+.|.+|+.+|++++|||||+++|++. .+.++||
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 35678889999999999999987654456789999987544322 356999999999999999999999996 4678999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~ 163 (273)
T d1mp8a_ 86 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163 (273)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence 999999999998764 5567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHH
Q 010340 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVV 302 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (512)
....||+.|+|||++.+..++.++|||||||++|||+| |.+|+.... ...+...+........++.+++.+
T Consensus 164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~ 238 (273)
T d1mp8a_ 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----NNDVIGRIENGERLPMPPNCPPTL 238 (273)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTCCHHH
T ss_pred eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCHHH
Confidence 23457899999999999999999999999999999998 665543321 111222222223335566777889
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 303 FDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 303 ~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+||.+||+.||++|||+.+|+++|+.+.
T Consensus 239 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 267 (273)
T d1mp8a_ 239 YSLMTKCWAYDPSRRPRFTELKAQLSTIL 267 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 99999999999999999999999998764
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.8e-53 Score=406.14 Aligned_cols=256 Identities=22% Similarity=0.288 Sum_probs=210.4
Q ss_pred cccccccCCCCCCCeEEEEEEcC--CCCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++.+++.||+|+||+||+|+++. ...+++.||||+++...... .++|.+|+.+|++++||||++++++|...+..++
T Consensus 14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~ 93 (301)
T d1lufa_ 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 93 (301)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEE
Confidence 45688999999999999999864 22367889999997654322 3579999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCcccee
Q 010340 148 VAEYMPNDTLAKHLFHWE----------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nil 205 (512)
||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+++ +|||||||+|||
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NIL 172 (301)
T d1lufa_ 94 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCL 172 (301)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEE
T ss_pred EEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceE
Confidence 999999999999996421 234899999999999999999999999 999999999999
Q ss_pred ecCCCCCeeecccCccccCC------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhc
Q 010340 206 FDENGDPRLSCFGLMKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRG 279 (512)
Q Consensus 206 l~~~~~~kl~Dfg~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~ 279 (512)
++.++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|||++|..||+.......
T Consensus 173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e-- 250 (301)
T d1lufa_ 173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-- 250 (301)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--
T ss_pred ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH--
Confidence 99999999999999875432 2245678899999999999999999999999999999999765444322111
Q ss_pred cchhhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 280 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
+...+........+..+++++.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus 251 --~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 251 --VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp --HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred --HHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11112222233455666778999999999999999999999999998875
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-52 Score=410.22 Aligned_cols=247 Identities=16% Similarity=0.150 Sum_probs=210.3
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHhcCCCCCccceEEEEeeCCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 145 (512)
+++|.+++.||+|+||.||+|+++. +++.||||++.+.. ....+.+.+|+.+|+.++|||||++++++.+....
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~---~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 116 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL 116 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECC---CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccc
Confidence 3467899999999999999999987 88899999987432 23356799999999999999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
++||||+.+|+|..++.. .+.+++..++.|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++....
T Consensus 117 ~~v~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~ 193 (350)
T d1rdqe_ 117 YMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EEEEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ccccccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeeccc
Confidence 999999999999999973 457999999999999999999999999 99999999999999999999999999987654
Q ss_pred C-CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHH
Q 010340 226 G-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 304 (512)
Q Consensus 226 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (512)
. ....||+.|||||++.+..++.++|||||||++|||+||+.||........ ...+... ....+...++.+.+
T Consensus 194 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~ 267 (350)
T d1rdqe_ 194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSG--KVRFPSHFSSDLKD 267 (350)
T ss_dssp CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTCCHHHHH
T ss_pred ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH----HHHHhcC--CCCCCccCCHHHHH
Confidence 3 456899999999999999999999999999999999999988764322111 1111111 12334556677899
Q ss_pred HHHHhhccCCCCCC-----ChHHHHHHh
Q 010340 305 LASRCLQYEPRERP-----NTKDLVSTL 327 (512)
Q Consensus 305 li~~cl~~~p~~Rp-----s~~~vl~~L 327 (512)
||.+||+.||.+|+ |++++++|-
T Consensus 268 li~~~L~~dP~kR~~~~r~t~~ell~Hp 295 (350)
T d1rdqe_ 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHHHHhhhCHHhccccccccHHHHHcCc
Confidence 99999999999994 899998863
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-52 Score=406.94 Aligned_cols=255 Identities=18% Similarity=0.263 Sum_probs=207.3
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCC-CCceEEEEEecCccCC-CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
++|.+++.||+|+||+||+|.+..++ .....||||+++.... ...+.|.+|+++|++++|||||+++|+|.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 35778999999999999999987621 1123689999875432 3357899999999999999999999999865 5678
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
+|||+.+|+|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++......
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8999999999998865 5678999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHHHH
Q 010340 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEAT 300 (512)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (512)
...||+.|+|||++.++.++.++|||||||++|||+| |..|+... ....+...+........+..+++
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~-----~~~~~~~~i~~~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-----PASEISSILEKGERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS-----CGGGHHHHHHHTCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHcCCCCCCCcccCH
Confidence 2357899999999999999999999999999999999 55443321 11223333333344455667778
Q ss_pred HHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 301 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 301 ~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
.+.+|+.+||+.||.+|||+.+|+++|+.+..
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 89999999999999999999999999987754
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-53 Score=399.12 Aligned_cols=254 Identities=19% Similarity=0.262 Sum_probs=199.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
.++.+++.||+|+||.||+|++.........||||++.+....+ .+.|.+|+.+|++++|||||+++|+|.+ +..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 45778999999999999999987654455679999998654333 3579999999999999999999999976 4678
Q ss_pred EEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 226 (512)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 87 lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~ 164 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164 (273)
T ss_dssp EEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccC
Confidence 99999999999998865 4457999999999999999999999999 999999999999999999999999999876443
Q ss_pred C-------ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHh-CCCCCChhhHHHHhccchhhhcccccCCCCCHHH
Q 010340 227 K-------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEE 298 (512)
Q Consensus 227 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (512)
. ...|+..|+|||++.+..++.++|||||||++|||+| |+.||........ ...+.......+.+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~ 240 (273)
T d1u46a_ 165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEGERLPRPEDC 240 (273)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----HHHHHTSCCCCCCCTTC
T ss_pred CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH----HHHHHhCCCCCCCcccc
Confidence 2 2356789999999999999999999999999999998 7877643322211 12222223333445566
Q ss_pred HHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 299 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 299 ~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
+..+.+|+.+||+.||++|||+.+|++.|...
T Consensus 241 ~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 241 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 77899999999999999999999999988754
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-52 Score=405.60 Aligned_cols=259 Identities=23% Similarity=0.291 Sum_probs=210.0
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC-CChhHHHHHHHHHhcC-CCCCccceEEEEeeCCee
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 145 (512)
+|+++.+.+.||+|+||.||+|.++.++ ....||||++..... ...+.|.+|+++|+++ +|||||+++|+|.+.+..
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~ 86 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 86 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETT-EEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCC-eEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCee
Confidence 3456678888999999999999998721 223578888764332 3456799999999999 799999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhc--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCC
Q 010340 146 LLVAEYMPNDTLAKHLFHW--------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 211 (512)
+|||||+++|+|.++|+.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.
T Consensus 87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~ 165 (309)
T d1fvra_ 87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYV 165 (309)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGC
T ss_pred EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCc
Confidence 9999999999999999642 2467999999999999999999999999 999999999999999999
Q ss_pred CeeecccCccccCC---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc
Q 010340 212 PRLSCFGLMKNSRD---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 212 ~kl~Dfg~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
+||+|||+++.... .....||..|+|||.+.++.++.++|||||||++|||++|..||+..... ..+...+..
T Consensus 166 ~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~----~~~~~~i~~ 241 (309)
T d1fvra_ 166 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----AELYEKLPQ 241 (309)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHGGG
T ss_pred eEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH----HHHHHHHHh
Confidence 99999999976443 23446899999999999999999999999999999999987665433111 111122222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 289 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
......+..+++.+.+||.+||+.||++|||+.+|+++|+.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 285 (309)
T d1fvra_ 242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285 (309)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 33445566677889999999999999999999999999998764
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.5e-52 Score=395.75 Aligned_cols=250 Identities=18% Similarity=0.153 Sum_probs=208.1
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC---------hhHHHHHHHHHhcCC-CCCccceEEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---------PKQFADEAWGVGKLR-HKRLANLIGY 138 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-h~niv~l~~~ 138 (512)
|.+|.+++.||+|+||+||+|++.. +++.||||++.+..... .+.+.+|+.+|++++ |||||+++++
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 78 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKP---TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 78 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cccCEEceEEecCcCeEEEEEEECC---CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 4567889999999999999999987 88999999997654332 135889999999996 9999999999
Q ss_pred EeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeeccc
Q 010340 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (512)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 218 (512)
+.+++.++||||||+||+|.++|. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||
T Consensus 79 ~~~~~~~~ivmE~~~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG 155 (277)
T d1phka_ 79 YETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFG 155 (277)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCT
T ss_pred cccCcceEEEEEcCCCchHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccch
Confidence 999999999999999999999997 3567999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC---CccccCcccCCcccccC------CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccc
Q 010340 219 LMKNSRDG---KSYSTNLAYTPPEYLRN------GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSH 289 (512)
Q Consensus 219 ~a~~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 289 (512)
+++..... ....||+.|+|||++.+ ..++.++||||+||++|||+||+.||.......... .+... ...
T Consensus 156 ~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~-~i~~~-~~~ 233 (277)
T d1phka_ 156 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR-MIMSG-NYQ 233 (277)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHT-CCC
T ss_pred heeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHH-HHHhC-CCC
Confidence 99876543 34678999999999853 347889999999999999999998876543221111 11110 111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 290 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.........++++.+|+.+||+.||.+|||+.++++|
T Consensus 234 ~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 234 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1222334667889999999999999999999999887
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-52 Score=405.91 Aligned_cols=247 Identities=17% Similarity=0.217 Sum_probs=207.8
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
|..|.+++.||+|+||+||+|.++. +++.||||+++... .+...+.+|+++|+.++|||||++++++.+.+.+|||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~---~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lv 79 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETS---SKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 6678899999999999999999988 88999999997653 2235688999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC--CCCCeeecccCccccCCC
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE--NGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~ 226 (512)
||||+||+|.+++.. ....+++.+++.|+.||+.||.|||+++ |+||||||+|||++. ...+||+|||+++.....
T Consensus 80 mE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~ 157 (321)
T d1tkia_ 80 FEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp ECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccC
Confidence 999999999999963 3447999999999999999999999999 999999999999985 457999999999876543
Q ss_pred C---ccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH----HHH
Q 010340 227 K---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS----EEA 299 (512)
Q Consensus 227 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 299 (512)
. ...+|+.|+|||.+.+..++.++|||||||++|+|++|..||........ ...+.... ..++. ..+
T Consensus 158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~----~~~i~~~~--~~~~~~~~~~~s 231 (321)
T d1tkia_ 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI----IENIMNAE--YTFDEEAFKEIS 231 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTC--CCCCHHHHTTSC
T ss_pred CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCC--CCCChhhccCCC
Confidence 3 45689999999999999999999999999999999999988765422211 11111111 11222 345
Q ss_pred HHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 300 TVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 300 ~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
+++.+||.+||..||.+|||+.++++|-
T Consensus 232 ~~~~~li~~~L~~dp~~R~s~~eil~hp 259 (321)
T d1tkia_ 232 IEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 6789999999999999999999999973
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-52 Score=405.32 Aligned_cols=248 Identities=17% Similarity=0.126 Sum_probs=200.8
Q ss_pred ccccccc-CCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEee----CCe
Q 010340 71 SDFIVSE-SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD----GDE 144 (512)
Q Consensus 71 ~~~~i~~-lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~ 144 (512)
.|.++++ ||+|+||.||+|.+.. +++.||||+++. ...+.+|+.++.++ +|||||+++++|.+ ...
T Consensus 12 ~y~i~~~~lG~G~fg~Vy~a~~~~---~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~ 83 (335)
T d2ozaa1 12 DYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 83 (335)
T ss_dssp TEEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred CEEEeeEEeeeccCeEEEEEEECC---CCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCE
Confidence 5667765 9999999999999987 788999999863 35788999987655 89999999999875 466
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC---CCCCeeecccCcc
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMK 221 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg~a~ 221 (512)
+|||||||+||+|.++|.......+++.+++.|+.||+.||.|||+++ |+||||||+|||++. .+.+||+|||+++
T Consensus 84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~ 162 (335)
T d2ozaa1 84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 162 (335)
T ss_dssp EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-Cccccccccccccccccccccccccccceee
Confidence 899999999999999997545567999999999999999999999999 999999999999975 5679999999998
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccccc--CCCCCH
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHL--EGNFSS 296 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 296 (512)
..... ....||+.|||||++.+..|+.++|||||||++|+|+||+.||...............+..... ......
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 242 (335)
T d2ozaa1 163 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 242 (335)
T ss_dssp ECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHH
T ss_pred eccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccc
Confidence 65433 3567999999999999999999999999999999999999887643211100000001111111 111123
Q ss_pred HHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 297 EEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 297 ~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
..++++.+||.+||+.||++|||+.++++|-
T Consensus 243 ~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 273 (335)
T d2ozaa1 243 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 273 (335)
T ss_dssp HSCHHHHHHHHHHSCSSTTTSCCHHHHHHSH
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHHcCH
Confidence 5677899999999999999999999999973
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.1e-52 Score=396.92 Aligned_cols=253 Identities=17% Similarity=0.202 Sum_probs=203.0
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCCh---hHHHHHHHHHhcCCCCCccceEEEEeeCC----
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 143 (512)
.|.+++.||+|+||.||+|.+.. +++.||||+++.....+. +.|.+|+++|+.++|||||++++++...+
T Consensus 8 rY~i~~~lG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~ 84 (277)
T d1o6ya_ 8 RYELGEILGFGGMSEVHLARDLR---LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 84 (277)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred eeEEeEEEeeCCCeEEEEEEECC---CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence 47788999999999999999987 889999999987655443 46899999999999999999999998654
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
.+||||||++|++|.+++. ..+.+++.+++.|+.||+.||.|||+++ |+||||||+|||++.++..+|+|||.+...
T Consensus 85 ~~~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~ 161 (277)
T d1o6ya_ 85 LPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAI 161 (277)
T ss_dssp EEEEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred eEEEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhh
Confidence 3789999999999999886 4567999999999999999999999999 999999999999999999999999987654
Q ss_pred CC-------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCH
Q 010340 224 RD-------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSS 296 (512)
Q Consensus 224 ~~-------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (512)
.. .....||+.|+|||++.+..++.++|||||||++|||+||+.||............+.. ..........
T Consensus 162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~ 239 (277)
T d1o6ya_ 162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE--DPIPPSARHE 239 (277)
T ss_dssp C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCGGGTSS
T ss_pred ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhc--CCCCCchhcc
Confidence 32 23457899999999999999999999999999999999999887643221111111100 0000111223
Q ss_pred HHHHHHHHHHHHhhccCCCCCC-ChHHHHHHhcccc
Q 010340 297 EEATVVFDLASRCLQYEPRERP-NTKDLVSTLAPLQ 331 (512)
Q Consensus 297 ~~~~~~~~li~~cl~~~p~~Rp-s~~~vl~~L~~~~ 331 (512)
..++.+.+||.+||+.||.+|| |++++++.|.++.
T Consensus 240 ~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 240 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 4567788999999999999999 8999999888765
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-52 Score=402.14 Aligned_cols=258 Identities=18% Similarity=0.230 Sum_probs=200.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeC-Ce
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDG-DE 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 144 (512)
+++.+++.||+|+||.||+|.+... ..+++.||||+++...... .+.+.+|+.++.++ +|+|||.+++++... ..
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~ 92 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 92 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence 4677889999999999999998653 2256889999997544322 35688888888887 789999999998764 46
Q ss_pred eEEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 210 (512)
+++|||||++|+|.++++... ...+++..++.++.||+.||.|||+++ ||||||||+|||++.++
T Consensus 93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~~ 171 (299)
T d1ywna1 93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKN 171 (299)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGG
T ss_pred EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCCC
Confidence 899999999999999997432 235899999999999999999999999 99999999999999999
Q ss_pred CCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhh
Q 010340 211 DPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH 284 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~ 284 (512)
.+||+|||+++..... ....||+.|+|||++.++.++.++|||||||++|||+||..+|+..... ...+..
T Consensus 172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~---~~~~~~ 248 (299)
T d1ywna1 172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---DEEFCR 248 (299)
T ss_dssp CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC---SHHHHH
T ss_pred cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH---HHHHHH
Confidence 9999999999764322 2356899999999999999999999999999999999987654432110 111222
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
.+........+..+++.+.+|+.+||+.||++|||+.+++++|+.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 249 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 22333344555667778999999999999999999999999998764
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=7e-52 Score=408.02 Aligned_cols=248 Identities=19% Similarity=0.155 Sum_probs=203.8
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC---CChhHHHH---HHHHHhcCCCCCccceEEEEeeC
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFAD---EAWGVGKLRHKRLANLIGYCCDG 142 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~ 142 (512)
.++|.+++.||+|+||.||+|++.. +++.||||++.+... .....+.+ |+.+++.++|||||++++++.+.
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~---t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~ 79 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP 79 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred HHhCeeeeEEecCCCeEEEEEEECC---CCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEC
Confidence 3567789999999999999999987 889999999864321 22233444 47788888999999999999999
Q ss_pred CeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
+.++||||||+||+|.+++. ....+++..++.++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.
T Consensus 80 ~~~~ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~ 156 (364)
T d1omwa3 80 DKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACD 156 (364)
T ss_dssp SEEEEEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred CEEEEEEEecCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeee
Confidence 99999999999999999997 3467899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCC--CccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc--ccCCCCCHH
Q 010340 223 SRDG--KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS--HLEGNFSSE 297 (512)
Q Consensus 223 ~~~~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 297 (512)
.... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... .....+... .....++..
T Consensus 157 ~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~~~ 231 (364)
T d1omwa3 157 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-----KDKHEIDRMTLTMAVELPDS 231 (364)
T ss_dssp CSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS-----SCHHHHHHHSSSCCCCCCSS
T ss_pred cCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcccCCCCCCCC
Confidence 5543 35679999999999965 4689999999999999999999988754311 111111111 112234455
Q ss_pred HHHHHHHHHHHhhccCCCCCCC-----hHHHHHHh
Q 010340 298 EATVVFDLASRCLQYEPRERPN-----TKDLVSTL 327 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps-----~~~vl~~L 327 (512)
.++.+.+||.+||+.||.+||| ++++++|-
T Consensus 232 ~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp 266 (364)
T d1omwa3 232 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 266 (364)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSG
T ss_pred CCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCc
Confidence 6778999999999999999999 68888873
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-51 Score=398.02 Aligned_cols=251 Identities=20% Similarity=0.297 Sum_probs=204.8
Q ss_pred cCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEee-CCeeEEEEEccCC
Q 010340 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLVAEYMPN 154 (512)
Q Consensus 77 ~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~E~~~~ 154 (512)
.||+|+||+||+|.+..+..+...||||+++..... ..++|.+|+++|++++|||||+++|+|.+ ++..++|||||++
T Consensus 34 ~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~ 113 (311)
T d1r0pa_ 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 113 (311)
T ss_dssp EEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTT
T ss_pred EEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeec
Confidence 579999999999998765434457999999753322 23679999999999999999999999876 4688999999999
Q ss_pred CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--------
Q 010340 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------- 226 (512)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-------- 226 (512)
|+|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 114 g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~ 191 (311)
T d1r0pa_ 114 GDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 191 (311)
T ss_dssp CBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCT
T ss_pred Cchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhccccccccceec
Confidence 999999864 5556889999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHHHHHHH
Q 010340 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLA 306 (512)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 306 (512)
....||+.|+|||.+.++.++.++|||||||++|||+||+.||...... ..+...+........+..+++.+.+||
T Consensus 192 ~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i~~g~~~~~p~~~~~~l~~li 267 (311)
T d1r0pa_ 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPDPLYEVM 267 (311)
T ss_dssp TCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHHHcCCCCCCcccCcHHHHHHH
Confidence 1245789999999999999999999999999999999988887654221 112222222233344556677899999
Q ss_pred HHhhccCCCCCCChHHHHHHhccccCC
Q 010340 307 SRCLQYEPRERPNTKDLVSTLAPLQNR 333 (512)
Q Consensus 307 ~~cl~~~p~~Rps~~~vl~~L~~~~~~ 333 (512)
.+||+.||++|||+.||+++|+.+...
T Consensus 268 ~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 268 LKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999988754
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-52 Score=400.89 Aligned_cols=245 Identities=18% Similarity=0.247 Sum_probs=205.9
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccC---CCChhHHHHHHHHHh-cCCCCCccceEEEEeeCCee
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVG-KLRHKRLANLIGYCCDGDER 145 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~ 145 (512)
.+|.+++.||+|+||+||+|+++. +++.||||+++++. ....+.+.+|+.++. .++|||||++++++.+++..
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~---t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~ 78 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKK---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 78 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECC---CCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCce
Confidence 357788999999999999999987 88999999997542 234456778888765 68999999999999999999
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
|||||||++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 79 yivmEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~ 155 (320)
T d1xjda_ 79 FFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENML 155 (320)
T ss_dssp EEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred eEEEeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhccc
Confidence 99999999999999997 4567899999999999999999999999 99999999999999999999999999986433
Q ss_pred ----CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHHHHHH
Q 010340 226 ----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSEEATV 301 (512)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (512)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+.. ....++...++.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~----~i~~--~~~~~p~~~s~~ 229 (320)
T d1xjda_ 156 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH----SIRM--DNPFYPRWLEKE 229 (320)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHH--CCCCCCTTSCHH
T ss_pred ccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHH----HHHc--CCCCCCccCCHH
Confidence 234578999999999999999999999999999999999998876432221111 1111 122445566778
Q ss_pred HHHHHHHhhccCCCCCCChH-HHHHH
Q 010340 302 VFDLASRCLQYEPRERPNTK-DLVST 326 (512)
Q Consensus 302 ~~~li~~cl~~~p~~Rps~~-~vl~~ 326 (512)
+.+||.+||..||.+|||+. ++++|
T Consensus 230 ~~dli~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 230 AKDLLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp HHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHHhcccCCCCCcCHHHHHHhC
Confidence 99999999999999999995 67665
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-51 Score=396.29 Aligned_cols=256 Identities=20% Similarity=0.284 Sum_probs=206.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCC----CCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCC
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~----~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 143 (512)
+++.+++.||+|+||.||+|+..... .++..||||+++...... ..++.+|+..+.++ +|||||+++++|.+++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 46778899999999999999876532 234689999998655322 35788999999888 8999999999999999
Q ss_pred eeEEEEEccCCCCHHhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCC
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 209 (512)
..++||||+++|+|.++|.... ...+++.+++.++.||+.||+|||+.+ ||||||||+|||++.+
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~ 171 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 171 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTT
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCC
Confidence 9999999999999999997432 245899999999999999999999999 9999999999999999
Q ss_pred CCCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhC-CCCCChhhHHHHhccch
Q 010340 210 GDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-KHIPPSHALDMIRGKNI 282 (512)
Q Consensus 210 ~~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg-~~~~~~~~~~~~~~~~~ 282 (512)
+.+||+|||+++..... ....+|+.|+|||++.++.|+.++|||||||++|||+|+ ..|+...... .+
T Consensus 172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~-----~~ 246 (299)
T d1fgka_ 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-----EL 246 (299)
T ss_dssp CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HH
T ss_pred CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH-----HH
Confidence 99999999998865432 235678999999999999999999999999999999985 5444322211 12
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 283 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
...+........+..+++.+.+||.+||+.||.+|||+.+|++.|+.+.
T Consensus 247 ~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 247 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 2233333444556667788999999999999999999999999998764
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-51 Score=394.24 Aligned_cols=247 Identities=20% Similarity=0.197 Sum_probs=195.5
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC-----hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 148 (512)
.|+.||+|+||+||+|.++. +++.||||+++...... .+.+.+|+.+|++++|||||++++++.+++..+||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~iv 78 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKN---TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV 78 (299)
T ss_dssp EEEEEEEETTEEEEEEECSS---CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred cceEeccCcCeEEEEEEECC---CCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeeh
Confidence 46778999999999999987 78899999997654322 24689999999999999999999999999999999
Q ss_pred EEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC--
Q 010340 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (512)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 226 (512)
|||+.++++..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 79 mE~~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~ 155 (299)
T d1ua2a_ 79 FDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 155 (299)
T ss_dssp EECCSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred hhhhcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCcc
Confidence 99999887766654 5667999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhc---------------cc
Q 010340 227 --KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLM---------------DS 288 (512)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~---------------~~ 288 (512)
....||+.|+|||++.+. .++.++|||||||++|||+||..||......... ..+.... ..
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l-~~i~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T d1ua2a_ 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL-TRIFETLGTPTEEQWPDMCSLPDY 234 (299)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHH-HHHHHhcCCCChhhccchhccchh
Confidence 345789999999998654 5799999999999999999999776543211100 0000000 00
Q ss_pred c---cCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 289 H---LEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 289 ~---~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
. .....+ +..++.+.+|+.+||+.||++|||+.|+++|=
T Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp 281 (299)
T d1ua2a_ 235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 281 (299)
T ss_dssp CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCH
Confidence 0 000111 23356789999999999999999999999873
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-51 Score=392.41 Aligned_cols=258 Identities=20% Similarity=0.297 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 146 (512)
+++.+++.||+|+||.||+|.+... ..+++.||||+++...... ...|.+|+.++++++|||||+++|+|...+..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 4566788899999999999988531 1146789999997543222 346899999999999999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhc--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeeccc
Q 010340 147 LVAEYMPNDTLAKHLFHW--------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 218 (512)
+||||+++|+|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFG 178 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 178 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecc
Confidence 999999999999998642 1235789999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCC
Q 010340 219 LMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEG 292 (512)
Q Consensus 219 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (512)
+++..... ....+|+.|+|||.+.+..++.++|||||||++|||+||..+|+..... ......+......
T Consensus 179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~----~~~~~~i~~~~~~ 254 (308)
T d1p4oa_ 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----EQVLRFVMEGGLL 254 (308)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH----HHHHHHHHTTCCC
T ss_pred cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHhCCCC
Confidence 99865432 2335789999999999999999999999999999999997555433211 1111112122233
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
..+..+++.+.+||.+||+.||.+|||+.+|+++|+....
T Consensus 255 ~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 255 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 4455667789999999999999999999999999987654
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-50 Score=386.16 Aligned_cols=252 Identities=20% Similarity=0.239 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
.+|.+++.||+|+||.||+|.+.. +++.||||+++..... ..+.+.+|+++|++++|||||++++++.+++..++
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~i 78 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKL---TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYL 78 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeE
Confidence 357788999999999999999987 7889999999765432 24679999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
||||+.+ ++.+++.......+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 79 v~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~ 156 (298)
T d1gz8a_ 79 VFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156 (298)
T ss_dssp EEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred EEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCc
Confidence 9999976 5556665546677999999999999999999999999 999999999999999999999999999765432
Q ss_pred ---CccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccc-----------hhhhc-cccc
Q 010340 227 ---KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKN-----------ILHLM-DSHL 290 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~-----------~~~~~-~~~~ 290 (512)
....||+.|+|||++.... ++.++|||||||++|+|++|+.||............ ..... ....
T Consensus 157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T d1gz8a_ 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236 (298)
T ss_dssp BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccc
Confidence 3457899999999987666 578999999999999999999887643211100000 00000 0000
Q ss_pred CCCC-----------CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 291 EGNF-----------SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 291 ~~~~-----------~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.... ....++.+.+|+.+||..||.+|||+.++++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0000 11234678899999999999999999999998
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-51 Score=392.64 Aligned_cols=257 Identities=19% Similarity=0.261 Sum_probs=212.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCC--CCCceEEEEEecCccCCCC-hhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 146 (512)
++.+.+.||+|+||.||+|++... ..+++.||||+++...... ...|.+|+.++.++ +|||||+++|+|.+....+
T Consensus 24 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~ 103 (311)
T d1t46a_ 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (311)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEE
Confidence 566778899999999999987532 2377899999998654322 34689999999999 7999999999999999999
Q ss_pred EEEEccCCCCHHhhhhhcC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC
Q 010340 147 LVAEYMPNDTLAKHLFHWE----------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (512)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 210 (512)
||||||++|+|.++++... ...+++..++.|+.||+.||.|||+++ ++||||||+|||++.++
T Consensus 104 lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~~ 182 (311)
T d1t46a_ 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGR 182 (311)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTT
T ss_pred EEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccccccccccccC
Confidence 9999999999999997532 236899999999999999999999999 99999999999999999
Q ss_pred CCeeecccCccccCCC------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhh
Q 010340 211 DPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILH 284 (512)
Q Consensus 211 ~~kl~Dfg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~ 284 (512)
.+||+|||+++..... ....||+.|+|||++.++.++.++|||||||++|||+|++.|++..... ...+..
T Consensus 183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~---~~~~~~ 259 (311)
T d1t46a_ 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---DSKFYK 259 (311)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS---SHHHHH
T ss_pred cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH---HHHHHH
Confidence 9999999999865442 2346789999999999999999999999999999999966565433111 111223
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 285 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
++........+...++.+.+||.+||+.||++|||+.+|++.|+...
T Consensus 260 ~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i 306 (311)
T d1t46a_ 260 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (311)
T ss_dssp HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence 34444455556667788999999999999999999999999998643
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-51 Score=386.90 Aligned_cols=239 Identities=21% Similarity=0.315 Sum_probs=200.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC------hhHHHHHHHHHhcCC--CCCccceEEEEeeC
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD------PKQFADEAWGVGKLR--HKRLANLIGYCCDG 142 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 142 (512)
+|.+.+.||+|+||.||+|++.. +++.||||++.+....+ ..++.+|+.+|++++ |||||++++++.+.
T Consensus 5 ~Y~i~~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~ 81 (273)
T d1xwsa_ 5 QYQVGPLLGSGGFGSVYSGIRVS---DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81 (273)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred eEEEeEEEeeCCCeEEEEEEECC---CCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence 56778889999999999999987 78899999997654332 235789999999986 89999999999999
Q ss_pred CeeEEEEEccCC-CCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-CCCCeeecccCc
Q 010340 143 DERLLVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLM 220 (512)
Q Consensus 143 ~~~~lv~E~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfg~a 220 (512)
+..++||||+.+ +++.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++
T Consensus 82 ~~~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a 158 (273)
T d1xwsa_ 82 DSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSG 158 (273)
T ss_dssp SEEEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CeEEEEEEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccc
Confidence 999999999976 67888886 3467999999999999999999999999 999999999999985 578999999999
Q ss_pred cccCCC--CccccCcccCCcccccCCCC-CCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccCCCCCHH
Q 010340 221 KNSRDG--KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLEGNFSSE 297 (512)
Q Consensus 221 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (512)
+..... ....||+.|+|||++.+..+ +.++|||||||++|||+||+.||.... ..... ...++..
T Consensus 159 ~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-~i~~~-----------~~~~~~~ 226 (273)
T d1xwsa_ 159 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-EIIRG-----------QVFFRQR 226 (273)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-HHHHC-----------CCCCSSC
T ss_pred eecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-HHhhc-----------ccCCCCC
Confidence 865443 45679999999999987765 567899999999999999998876432 11111 1123334
Q ss_pred HHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 298 EATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 298 ~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
.++++.+||.+||+.||++|||++|+++|-
T Consensus 227 ~s~~~~~li~~~L~~dp~~R~s~~eil~hp 256 (273)
T d1xwsa_ 227 VSSECQHLIRWCLALRPSDRPTFEEIQNHP 256 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence 556788999999999999999999999873
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-49 Score=384.19 Aligned_cols=252 Identities=21% Similarity=0.249 Sum_probs=198.8
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcC---CCCCccceEEEEee---
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL---RHKRLANLIGYCCD--- 141 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~~--- 141 (512)
++|.+++.||+|+||+||+|++..+ +++.||||+++..... ....+.+|+.+|+.| +||||++++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~--~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CCEEEEEEEecccCeEEEEEEEECC--CCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 4678999999999999999998652 4678999999754332 234677888887766 79999999999863
Q ss_pred --CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccC
Q 010340 142 --GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (512)
Q Consensus 142 --~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~ 219 (512)
....+++|||++++++.... ......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~ 162 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGL 162 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred ccCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhh
Confidence 34689999999887665443 336677999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCC---CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhh-----------
Q 010340 220 MKNSRD---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHL----------- 285 (512)
Q Consensus 220 a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~----------- 285 (512)
++.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+...
T Consensus 163 ~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~ 241 (305)
T d1blxa_ 163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG-KILDVIGLPGEEDWPR 241 (305)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCCCCGGGSCT
T ss_pred hhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHH-HHHHhhCCCchhcccc
Confidence 876543 235678999999999999999999999999999999999998876432111000 00000
Q ss_pred --------ccc---ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 286 --------MDS---HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 286 --------~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
... .....+....++.+.+||.+||+.||++|||+.|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 00011223445678899999999999999999999987
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.6e-49 Score=380.18 Aligned_cols=250 Identities=20% Similarity=0.248 Sum_probs=198.7
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC--CChhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..|.++++||+|+||+||+|+++ +++.||||+++.... ...+.+.+|+.+|++++|||||++++++.+.+..++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i 77 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVL 77 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEE
T ss_pred CCceeccEEecCCCcEEEEEEeC----CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeE
Confidence 35778999999999999999986 678899999976532 224689999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCC-
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~- 226 (512)
+|||+.++.+..+.. ..+.+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||++......
T Consensus 78 ~~e~~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~ 154 (286)
T d1ob3a_ 78 VFEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (286)
T ss_dssp EEECCSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred EEEeehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCc
Confidence 999998876666654 5678999999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc--------------chhhhc--
Q 010340 227 ---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK--------------NILHLM-- 286 (512)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~--------------~~~~~~-- 286 (512)
....+++.|+|||.+.+. .++.++|||||||++|||++|+.||........... ......
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T d1ob3a_ 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (286)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhc
Confidence 344688999999999764 468999999999999999999988754311110000 000000
Q ss_pred cccc-------CCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 287 DSHL-------EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 287 ~~~~-------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.... ........++.+.+|+.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000 001123345678899999999999999999999976
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-49 Score=381.11 Aligned_cols=249 Identities=19% Similarity=0.246 Sum_probs=191.4
Q ss_pred ccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHH--HHHHHhcCCCCCccceEEEEeeCC----ee
Q 010340 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD--EAWGVGKLRHKRLANLIGYCCDGD----ER 145 (512)
Q Consensus 72 ~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~--E~~~l~~l~h~niv~l~~~~~~~~----~~ 145 (512)
+.+.+.||+|+||.||+|++ +++.||||+++... .+.+.+ |+..+..++|||||+++++|.+.+ .+
T Consensus 5 ~~l~~~iG~G~fg~Vy~~~~-----~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~ 76 (303)
T d1vjya_ 5 IVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp EEEEEEEECCSSSEEEEEEE-----TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEE
Confidence 34556789999999999986 56789999997543 334444 555556789999999999998654 57
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc--------CCCccccccCccceeecCCCCCeeecc
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS--------EGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~--------~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
+|||||+++|+|.++|+. ..++|..++.++.|++.||.|||+ ++ |+||||||+||||+.++.+||+||
T Consensus 77 ~lv~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DF 152 (303)
T d1vjya_ 77 WLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEec
Confidence 999999999999999964 469999999999999999999997 46 999999999999999999999999
Q ss_pred cCccccCCC--------CccccCcccCCcccccCCC------CCCCCcEEehHHHHHHHHhCCCCCChhhHH-----HH-
Q 010340 218 GLMKNSRDG--------KSYSTNLAYTPPEYLRNGR------VTPESVIFSFGTVLLDLLSGKHIPPSHALD-----MI- 277 (512)
Q Consensus 218 g~a~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~~l~elltg~~~~~~~~~~-----~~- 277 (512)
|+++..... ....||+.|+|||++.+.. ++.++|||||||+||||+||..|+...... ..
T Consensus 153 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~ 232 (303)
T d1vjya_ 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcc
Confidence 998765332 2456899999999986542 677899999999999999998654221000 00
Q ss_pred h-ccc---h-hhhcccccCCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccccC
Q 010340 278 R-GKN---I-LHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 332 (512)
Q Consensus 278 ~-~~~---~-~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~~ 332 (512)
. ... . ........++.++ ......+.+|+.+||+.||++|||+.+|++.|+.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 297 (303)
T d1vjya_ 233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 0 000 0 0111122222222 2455678999999999999999999999999987753
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-48 Score=380.94 Aligned_cols=248 Identities=17% Similarity=0.226 Sum_probs=193.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCC-----
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD----- 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 143 (512)
.|.+++.||+|+||+||+|.+.. +++.||||+++...... .+.+.+|+++|+.++|||||+++++|...+
T Consensus 19 ~Y~~i~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 19 VYRDLQPVGSGAYGAVCSAVDGR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp SEEEEEEC------CEEEEEETT---TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cEEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 56789999999999999999987 88999999998654322 356889999999999999999999998654
Q ss_pred -eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccc
Q 010340 144 -ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (512)
Q Consensus 144 -~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 222 (512)
.++|||||+ +.+|..++. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~ 170 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQ 170 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ceEEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceec
Confidence 479999999 668888774 357999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCC-CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------ccc------------
Q 010340 223 SRDG-KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------GKN------------ 281 (512)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~~------------ 281 (512)
.... ....||+.|+|||++.+. .++.++||||+||++|||++|+.||......... ...
T Consensus 171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (346)
T d1cm8a_ 171 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 250 (346)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred cCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchh
Confidence 6543 456789999999999764 4689999999999999999999887543111000 000
Q ss_pred ---hhhhcccccC---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 282 ---ILHLMDSHLE---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 282 ---~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.......... .......++.+.+||.+||..||.+|||+.++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 251 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000 01123345678899999999999999999999998
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-48 Score=373.87 Aligned_cols=254 Identities=20% Similarity=0.210 Sum_probs=196.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC--ChhHHHHHHHHHhcCCCCCccceEEEEee----
Q 010340 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCD---- 141 (512)
Q Consensus 68 ~f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~---- 141 (512)
..+.|.+++.||+|+||+||+|++.. +++.||||++...... ..+++.+|+.+|++++||||+++++++..
T Consensus 8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~ 84 (318)
T d3blha1 8 EVSKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP 84 (318)
T ss_dssp BGGGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred ccCCEEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccc
Confidence 34678899999999999999999987 8899999998765432 24678999999999999999999999865
Q ss_pred ----CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecc
Q 010340 142 ----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (512)
Q Consensus 142 ----~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 217 (512)
....++||||+.++++..... ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 85 ~~~~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~df 161 (318)
T d3blha1 85 YNRCKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADF 161 (318)
T ss_dssp ------CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCC
T ss_pred ccccCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeec
Confidence 346899999998876655443 5567999999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCC--------CccccCcccCCcccccCC-CCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc
Q 010340 218 GLMKNSRDG--------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS 288 (512)
Q Consensus 218 g~a~~~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~ 288 (512)
|+++..... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||......... ..+......
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~-~~i~~~~~~ 240 (318)
T d3blha1 162 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL-ALISQLCGS 240 (318)
T ss_dssp TTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCC
T ss_pred ceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHH-HHHHHhcCC
Confidence 999754421 235689999999999765 5899999999999999999999887543111110 000000000
Q ss_pred --------------------ccCCCCC-------HHHHHHHHHHHHHhhccCCCCCCChHHHHHHhc
Q 010340 289 --------------------HLEGNFS-------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 328 (512)
Q Consensus 289 --------------------~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~ 328 (512)
....... ...++.+.+||.+||+.||++|||+.|+++|-.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf 307 (318)
T d3blha1 241 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307 (318)
T ss_dssp CCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred CChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence 0000000 012346789999999999999999999999854
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-48 Score=369.46 Aligned_cols=251 Identities=19% Similarity=0.225 Sum_probs=204.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeCCeeEE
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 147 (512)
..|.+++.||+|+||+||+|++.. +++.||||+++...... .+++.+|+.+|+.++||||++++++|.+....++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~i 78 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL 78 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECC---CCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeE
Confidence 367899999999999999999987 88999999997654332 4679999999999999999999999999999999
Q ss_pred EEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCCCC
Q 010340 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (512)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 227 (512)
|||++.+++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++......
T Consensus 79 v~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~ 155 (292)
T d1unla_ 79 VFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EEECCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred Eeeeccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCC
Confidence 999999999988876 5678899999999999999999999999 9999999999999999999999999998754432
Q ss_pred ----ccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcc---------------
Q 010340 228 ----SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMD--------------- 287 (512)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~--------------- 287 (512)
...+++.|+|||++.+.. ++.++|||||||++|||++|+.||+...........+.....
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (292)
T d1unla_ 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccc
Confidence 345678899999987665 689999999999999999999886532111100000000000
Q ss_pred ---------cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 288 ---------SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 288 ---------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
...........++.+.+|+.+||+.||.+|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000111223445678899999999999999999999987
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-48 Score=378.96 Aligned_cols=250 Identities=20% Similarity=0.255 Sum_probs=205.5
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCC----CChhHHHHHHHHHhcCCC-CCccceEEEEeeCCe
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKLRH-KRLANLIGYCCDGDE 144 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~ 144 (512)
++|.+++.||+|+||+||+|.......+++.||||++++... ...+.+.+|+++|++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 457789999999999999999866555789999999975432 234678899999999966 899999999999999
Q ss_pred eEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccC
Q 010340 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 224 (512)
.++||||+.+|+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~ 180 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 180 (322)
T ss_dssp EEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred eeeeeecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhhc
Confidence 999999999999999997 4456788999999999999999999999 9999999999999999999999999997653
Q ss_pred C-----CCccccCcccCCcccccCCC--CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhccc--ccCCCCC
Q 010340 225 D-----GKSYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDS--HLEGNFS 295 (512)
Q Consensus 225 ~-----~~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 295 (512)
. .....|++.|++||.+.+.. ++.++|||||||+||||+||+.||...... .....+... .....++
T Consensus 181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~----~~~~~i~~~~~~~~~~~~ 256 (322)
T d1vzoa_ 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSEPPYP 256 (322)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHCCCCCC
T ss_pred ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcccCCCCCc
Confidence 3 23456899999999997653 688999999999999999999887543211 111111111 1123445
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHH
Q 010340 296 SEEATVVFDLASRCLQYEPRERPN-----TKDLVST 326 (512)
Q Consensus 296 ~~~~~~~~~li~~cl~~~p~~Rps-----~~~vl~~ 326 (512)
...++.+.+|+.+||+.||.+||| ++|+++|
T Consensus 257 ~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 257 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 667788999999999999999994 7888876
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-48 Score=381.24 Aligned_cols=248 Identities=23% Similarity=0.236 Sum_probs=192.9
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCccceEEEEeeC------Ce
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG------DE 144 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 144 (512)
+|..++.||+|+||+||+|++.. +++.||||++.... ..+.+|+.+|++++|||||+++++|... .+
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~ 93 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCE
T ss_pred CcEeeeEEeeCcCeEEEEEEECC---CCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceE
Confidence 35567788999999999999987 88999999997643 2345799999999999999999998643 35
Q ss_pred eEEEEEccCCCCHHhhhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeeecccCccc
Q 010340 145 RLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKN 222 (512)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~a~~ 222 (512)
++||||||+++.+..+... .....+++..++.|+.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+++.
T Consensus 94 ~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~ 172 (350)
T d1q5ka_ 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172 (350)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred EEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhh
Confidence 7899999987644333321 25667999999999999999999999999 99999999999999775 899999999986
Q ss_pred cCC---CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHh-------ccchh----hhc-
Q 010340 223 SRD---GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIR-------GKNIL----HLM- 286 (512)
Q Consensus 223 ~~~---~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~-------~~~~~----~~~- 286 (512)
... ..+..||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......... +.... ...
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 252 (350)
T d1q5ka_ 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252 (350)
T ss_dssp CCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_pred ccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhcc
Confidence 543 335678999999999875 46899999999999999999999887543211100 00000 000
Q ss_pred ---c--------cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 287 ---D--------SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 287 ---~--------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
. ...........++.+.+|+.+||..||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 000001123456678999999999999999999999987
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-48 Score=379.76 Aligned_cols=249 Identities=19% Similarity=0.205 Sum_probs=192.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-ChhHHHHHHHHHhcCCCCCccceEEEEeeCC----ee
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD----ER 145 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 145 (512)
.|.+++.||+|+||+||+|.+.. +++.||||++.+.... ..+.+.+|+.+|+.++||||+++++++.... ..
T Consensus 9 rY~~~~~LG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~ 85 (345)
T d1pmea_ 9 RYTNLSYIGEGAYGMVCSAYDNV---NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 85 (345)
T ss_dssp TEEEEEECC---CCCEEEEEETT---TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred CeEEEEEEeeccCeEEEEEEECC---CCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence 47789999999999999999887 7899999999764422 2357899999999999999999999997643 23
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCccccCC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 225 (512)
+++++|+.+|+|.+++.. +.+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++....
T Consensus 86 ~~l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~ 161 (345)
T d1pmea_ 86 VYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161 (345)
T ss_dssp EEEEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence 455566679999999953 46999999999999999999999999 99999999999999999999999999875432
Q ss_pred -------CCccccCcccCCcccccC-CCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchh--------------
Q 010340 226 -------GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNIL-------------- 283 (512)
Q Consensus 226 -------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~-------------- 283 (512)
.....||+.|+|||++.. ..++.++||||+||++|||++|+.||..............
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
T d1pmea_ 162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 241 (345)
T ss_dssp GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhh
Confidence 234568999999999855 4578899999999999999999988754321100000000
Q ss_pred -----hhc-ccccCCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 284 -----HLM-DSHLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 284 -----~~~-~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
... ........ .+..+..+.+|+.+||+.||.+|||+.++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 00000011 11234568899999999999999999999987
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.6e-47 Score=373.58 Aligned_cols=247 Identities=18% Similarity=0.168 Sum_probs=198.2
Q ss_pred CCcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEEee--CCee
Q 010340 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCD--GDER 145 (512)
Q Consensus 69 f~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~ 145 (512)
.++|.+++.||+|+||+||+|++.. +++.||||+++.. ..+++.+|+.+|+.++ ||||+++++++.. ...+
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~---~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~ 107 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINIT---NNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence 3468899999999999999999987 8899999999753 3578999999999995 9999999999975 3568
Q ss_pred EEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCC-CCeeecccCccccC
Q 010340 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSR 224 (512)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg~a~~~~ 224 (512)
++|||||.+++|..+. +.+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++...
T Consensus 108 ~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 108 ALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp EEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred eEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceecc
Confidence 9999999999997765 35999999999999999999999999 99999999999998655 58999999998654
Q ss_pred C---CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc--------------------
Q 010340 225 D---GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK-------------------- 280 (512)
Q Consensus 225 ~---~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~-------------------- 280 (512)
. .....+|+.|+|||.+.+.. ++.++||||+||++|||++|+.||...........
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 261 (328)
T d3bqca1 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 261 (328)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence 3 33557899999999987654 79999999999999999999988754211100000
Q ss_pred ----chhhhcc--------cccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 281 ----NILHLMD--------SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 281 ----~~~~~~~--------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
....... ...........++++.+||.+||..||++|||++|+++|-
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp 320 (328)
T d3bqca1 262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320 (328)
T ss_dssp CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 0000000 0011111233567789999999999999999999999873
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=3.4e-47 Score=364.52 Aligned_cols=253 Identities=15% Similarity=0.123 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCC-CCccceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH-KRLANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 149 (512)
.|.+++.||+|+||+||+|++.. +++.||||++.... +...+.+|++++..++| +||+.+++++.+....++||
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm 80 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLL---NNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 80 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence 46788899999999999999987 78999999986543 34568899999999965 99999999999999999999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecC-----CCCCeeecccCccccC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-----NGDPRLSCFGLMKNSR 224 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~-----~~~~kl~Dfg~a~~~~ 224 (512)
||+ +++|.+++.. ....+++.++..++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++...
T Consensus 81 e~~-~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~ 157 (293)
T d1csna_ 81 DLL-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 157 (293)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred Eec-CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence 999 6799998864 4567999999999999999999999999 999999999999974 5789999999998643
Q ss_pred C-----------CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHH--HHhccchhhhcccccC
Q 010340 225 D-----------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALD--MIRGKNILHLMDSHLE 291 (512)
Q Consensus 225 ~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~--~~~~~~~~~~~~~~~~ 291 (512)
. .....||+.|||||++.+..++.++|||||||++|||+||+.||...... ......+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (293)
T d1csna_ 158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 237 (293)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh
Confidence 2 22457899999999999999999999999999999999999887532110 0000001000000000
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhcccc
Q 010340 292 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 331 (512)
Q Consensus 292 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~~ 331 (512)
......+++++.+++..|+..+|++||+++.+.+.|+.+.
T Consensus 238 ~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~ 277 (293)
T d1csna_ 238 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 277 (293)
T ss_dssp HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 0111234466889999999999999999999888887654
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.9e-47 Score=365.95 Aligned_cols=251 Identities=14% Similarity=0.105 Sum_probs=195.7
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCCc-cceEEEEeeCCeeEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL-ANLIGYCCDGDERLLVA 149 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ 149 (512)
.|.+++.||+|+||.||+|++.. +++.||||++.... ..+++.+|+++++.++|+|+ +.+.+++.+.+..++||
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm 82 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 82 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred EEEEeEEEeeCCCcEEEEEEECC---CCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence 47788999999999999999987 78899999987654 23568999999999977665 55556667788899999
Q ss_pred EccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeec---CCCCCeeecccCccccCCC
Q 010340 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRDG 226 (512)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~~ 226 (512)
||+ +++|.+.+.. ....+++..+..++.|++.||+|||+++ ||||||||+|||++ .+..+||+|||+++.....
T Consensus 83 e~~-~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~ 159 (299)
T d1ckia_ 83 ELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 159 (299)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred EEc-CCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence 999 5577766654 5667999999999999999999999999 99999999999875 4567999999999865432
Q ss_pred -----------CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccchhhhcccccC---C
Q 010340 227 -----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILHLMDSHLE---G 292 (512)
Q Consensus 227 -----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 292 (512)
....||+.|||||++.+..++.++|||||||++|||+||+.||.......... ........... .
T Consensus 160 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (299)
T d1ckia_ 160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMSTPIE 238 (299)
T ss_dssp TTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--------HHHHHHHHHHSCHH
T ss_pred ccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH-HHHHhhcccCCCChh
Confidence 24578999999999999999999999999999999999998875432111100 00000000000 0
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHhccc
Q 010340 293 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 330 (512)
Q Consensus 293 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L~~~ 330 (512)
.....+++++.+|+.+||+.||.+||++.++.+.|+.+
T Consensus 239 ~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 276 (299)
T d1ckia_ 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276 (299)
T ss_dssp HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 11223456788999999999999999999888877654
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-46 Score=368.07 Aligned_cols=249 Identities=18% Similarity=0.192 Sum_probs=190.6
Q ss_pred CcccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEee------
Q 010340 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD------ 141 (512)
Q Consensus 70 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 141 (512)
..|.+++.||+|+||+||+|.+.. +++.||||++....... ...+.+|+.+|++++|||||+++++|..
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~---t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~ 93 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 93 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETT---TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred CCeEEEEEeecCcCeEEEEEEECC---CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccccc
Confidence 357889999999999999999987 88999999998654322 2468899999999999999999999964
Q ss_pred CCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcc
Q 010340 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
...+|+||||+.++ +.+.+. ..+++..++.++.||+.||.|||++| |+||||||+|||++.++.+|++|||+++
T Consensus 94 ~~~~~iv~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~ 167 (355)
T d2b1pa1 94 FQDVYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_dssp CCEEEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred CceeEEEEeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhh
Confidence 36789999999765 444443 45899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhcc------------------
Q 010340 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGK------------------ 280 (512)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~------------------ 280 (512)
..... ....+|+.|+|||++.+..++.++||||+||++|||++|+.||...........
T Consensus 168 ~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 247 (355)
T d2b1pa1 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_dssp -------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCH
T ss_pred ccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhh
Confidence 65432 345789999999999999999999999999999999999988753311100000
Q ss_pred ---------------chhhhcccccCCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 281 ---------------NILHLMDSHLEGN---FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 281 ---------------~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
............. .....++.+.+||.+||..||++|||++|+|+|-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hp 312 (355)
T d2b1pa1 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312 (355)
T ss_dssp HHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCc
Confidence 0000000001011 1134567899999999999999999999999883
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-46 Score=369.96 Aligned_cols=250 Identities=17% Similarity=0.169 Sum_probs=194.8
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCC--hhHHHHHHHHHhcCCCCCccceEEEEeeC-----C
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG-----D 143 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 143 (512)
.|.+++.||+|+||+||+|++.. +++.||||++....... .+.+.+|+.+|++++|||||++++++... .
T Consensus 19 rY~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 19 RYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp TEEEEEECGGGTTSSEEEEEETT---TTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CeEEEEEEecCCCeEEEEEEECC---CCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 57789999999999999999987 89999999998654332 34688999999999999999999999643 3
Q ss_pred eeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeeecccCcccc
Q 010340 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (512)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 223 (512)
..++||+|+.+|+|.+++. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+|++|||++...
T Consensus 96 ~~~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~ 171 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 171 (348)
T ss_dssp CCCEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred ceEEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhccc
Confidence 3466777888999999994 457999999999999999999999999 999999999999999999999999998765
Q ss_pred CC-CCccccCcccCCcccccCCC-CCCCCcEEehHHHHHHHHhCCCCCChhhHHHHhccch-------------------
Q 010340 224 RD-GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNI------------------- 282 (512)
Q Consensus 224 ~~-~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~~~~~~------------------- 282 (512)
.. .....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.............
T Consensus 172 ~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 251 (348)
T d2gfsa1 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251 (348)
T ss_dssp TGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHH
T ss_pred CcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhh
Confidence 43 34567899999999987655 6889999999999999999998876431110000000
Q ss_pred hhhccccc-CCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHh
Q 010340 283 LHLMDSHL-EGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 327 (512)
Q Consensus 283 ~~~~~~~~-~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~L 327 (512)
........ .... ....++.+.+||.+||..||.+|||+.|+++|=
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp 302 (348)
T d2gfsa1 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302 (348)
T ss_dssp HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCH
Confidence 00000000 0000 012356688999999999999999999999873
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.6e-41 Score=331.48 Aligned_cols=251 Identities=17% Similarity=0.190 Sum_probs=192.2
Q ss_pred cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC-----------CCCccceEEEE
Q 010340 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-----------HKRLANLIGYC 139 (512)
Q Consensus 71 ~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~ 139 (512)
.|.++++||+|+||+||+|++.. +++.||||+++.... ..+.+.+|+++++.+. |+||+++++++
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~---~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~ 89 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMV---NNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 89 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence 48899999999999999999987 889999999975432 2356888999988875 57899999988
Q ss_pred ee--CCeeEEEEEccCCCC-HHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCccccccCccceeecCCCC----
Q 010340 140 CD--GDERLLVAEYMPNDT-LAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGD---- 211 (512)
Q Consensus 140 ~~--~~~~~lv~E~~~~g~-L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~---- 211 (512)
.. ....+++|+++..+. ............+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~ 168 (362)
T d1q8ya_ 90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENL 168 (362)
T ss_dssp EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTE
T ss_pred eeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCccccc
Confidence 64 355667777665543 3333444466788999999999999999999998 76 999999999999986553
Q ss_pred --CeeecccCccccCC-CCccccCcccCCcccccCCCCCCCCcEEehHHHHHHHHhCCCCCChhhHHHH-----------
Q 010340 212 --PRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMI----------- 277 (512)
Q Consensus 212 --~kl~Dfg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~~~~~~~~~~~----------- 277 (512)
++++|||.+..... .....||+.|+|||++.+..++.++||||+||++++|++|+.||........
T Consensus 169 ~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~ 248 (362)
T d1q8ya_ 169 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 248 (362)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred ceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHH
Confidence 89999999876543 3456789999999999999999999999999999999999988653211000
Q ss_pred --hcc----------chhhhcc------c-------------ccCCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 010340 278 --RGK----------NILHLMD------S-------------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 326 (512)
Q Consensus 278 --~~~----------~~~~~~~------~-------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~vl~~ 326 (512)
.+. ....... . ......+...++.+.+|+.+||..||.+|||++|+|+|
T Consensus 249 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 249 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred HHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 0000000 0 00122345677889999999999999999999999987
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=3.4e-25 Score=197.10 Aligned_cols=162 Identities=17% Similarity=0.097 Sum_probs=119.2
Q ss_pred ccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCC-----C-------------hhHHHHHHHHHhcCCCCCccce
Q 010340 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----D-------------PKQFADEAWGVGKLRHKRLANL 135 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----~-------------~~~~~~E~~~l~~l~h~niv~l 135 (512)
+.+.||+|+||+||+|.+. +++.||||+++..... . ...+.+|...+.++.|++++..
T Consensus 4 vg~~IG~G~~g~Vy~a~~~----~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~ 79 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSE----KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKV 79 (191)
T ss_dssp EEEEEEECSSEEEEEEEET----TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCE
T ss_pred hCCEeeeCcceEEEEEECC----CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceE
Confidence 4567899999999999885 6788999987643211 0 1235578899999999999998
Q ss_pred EEEEeeCCeeEEEEEccCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccccccCccceeecCCCCCeee
Q 010340 136 IGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (512)
Q Consensus 136 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 215 (512)
+++.. .+++|||+++..+.+ ++...+..++.|++.+|.|||+++ |+||||||+|||+++++ ++|+
T Consensus 80 ~~~~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~li 144 (191)
T d1zara2 80 YAWEG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWII 144 (191)
T ss_dssp EEEET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEEC
T ss_pred EEecC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEE
Confidence 87642 379999998865533 333445679999999999999999 99999999999999654 8999
Q ss_pred cccCccccCCCCccccCcccCC------cccccCCCCCCCCcEEehHHHH
Q 010340 216 CFGLMKNSRDGKSYSTNLAYTP------PEYLRNGRVTPESVIFSFGTVL 259 (512)
Q Consensus 216 Dfg~a~~~~~~~~~~~t~~y~a------PE~~~~~~~~~~~Dv~slG~~l 259 (512)
|||+|......... .|.. .+.+ ...|+.++|+||+.--+
T Consensus 145 DFG~a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 145 DFPQSVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CCTTCEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred ECCCcccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 99998765432210 0111 0111 35688999999976544
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=4e-20 Score=149.86 Aligned_cols=108 Identities=21% Similarity=0.351 Sum_probs=103.9
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..++.+|+.+++.|+|++|+..|+++|+.+|. ++.+|+++|.||..+|++++|+.+|.++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 4567899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
+..+|++++|+.+|+++++++|++..++.
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 109 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNPQLKE 109 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999999999887654
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.79 E-value=3.1e-19 Score=159.14 Aligned_cols=108 Identities=22% Similarity=0.354 Sum_probs=103.7
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..|+++|+.+++.|+|++|+..|++||+++|. ++.+|+++|.||+++|+|++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4778999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
|..+|+|++|+.+|++|++++|++...+.
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~~~~~ 110 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQRLNFG 110 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 99999999999999999999998776553
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=7.3e-19 Score=150.80 Aligned_cols=110 Identities=20% Similarity=0.301 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 478 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 478 (512)
.++.+..|+.+|+.+++.|+|++|+..|+++|+++|. +..+|+++|.||+.+|++++|+.+|+++++++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 4577899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 479 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 479 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
|.++..+|+|++|+.+|+++++++|.+..++
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~ 115 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDKDAK 115 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999999987653
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.75 E-value=5.1e-18 Score=144.26 Aligned_cols=112 Identities=17% Similarity=0.204 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---------------hHHHhhhHHHhhhcCChHHHHHHHH
Q 010340 398 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---------------PTVYARRSLCHLMCDQPDAALRDAM 462 (512)
Q Consensus 398 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~ 462 (512)
+.++.+..++.+|+.+|+.|+|++|+..|++||+..+... ..+|.|+|.||+++|++++|+++|+
T Consensus 12 e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~ 91 (153)
T d2fbna1 12 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 91 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhh
Confidence 5667899999999999999999999999999998655421 2478999999999999999999999
Q ss_pred HHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 463 QAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 463 ~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+||+++|++.++|+++|.+|..+|+|++|+.+|+++++++|+|..++
T Consensus 92 ~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 92 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred ccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999987664
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=1.1e-17 Score=144.93 Aligned_cols=115 Identities=16% Similarity=0.175 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC--------------hHHHhhhHHHhhhcCChHHHHHH
Q 010340 395 EWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS--------------PTVYARRSLCHLMCDQPDAALRD 460 (512)
Q Consensus 395 ~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~--------------~~~~~~~~~~~~~~~~~~~A~~~ 460 (512)
++-+.++.+..++.+|+.+++.|+|++|+..|++||+..+... ..+|.|+|.||+++|+|++|+.+
T Consensus 5 ~~~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~ 84 (170)
T d1p5qa1 5 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIES 84 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccch
Confidence 3445667899999999999999999999999999998876521 25688999999999999999999
Q ss_pred HHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 461 AMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 461 ~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++++|+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|+|..+.
T Consensus 85 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~ 133 (170)
T d1p5qa1 85 CNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 133 (170)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred hhhhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999999999999999987654
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.72 E-value=1.7e-17 Score=143.41 Aligned_cols=116 Identities=12% Similarity=0.177 Sum_probs=104.0
Q ss_pred hhHHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC--------------ChHHHhhhHHHhhhcCChHHHHH
Q 010340 394 QEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--------------SPTVYARRSLCHLMCDQPDAALR 459 (512)
Q Consensus 394 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~--------------~~~~~~~~~~~~~~~~~~~~A~~ 459 (512)
.+..+.++.+..++++|+.+++.|+|.+|+..|++||..-+.. ...+|.|+|.||+++|+|++|+.
T Consensus 6 m~~~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~ 85 (168)
T d1kt1a1 6 MDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVE 85 (168)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchh
Confidence 3445567789999999999999999999999999999753331 13468899999999999999999
Q ss_pred HHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 460 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 460 ~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+++++++++|++..+|+++|.++..+|+|++|+.+|+++++++|+|..++
T Consensus 86 ~~~~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~ 135 (168)
T d1kt1a1 86 CCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 135 (168)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hhhhhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999987664
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.70 E-value=4.4e-17 Score=140.98 Aligned_cols=113 Identities=15% Similarity=0.222 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc----------------CCCCChHHHhhhHHHhhhcCChHHHHH
Q 010340 396 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV----------------GTMVSPTVYARRSLCHLMCDQPDAALR 459 (512)
Q Consensus 396 ~~~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~----------------~~~~~~~~~~~~~~~~~~~~~~~~A~~ 459 (512)
....+..+..+...|+.++..|+|++|+..|++||+. +|. ...+|.|+|.||.++|+|++|+.
T Consensus 20 ~~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~ 98 (169)
T d1ihga1 20 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 98 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhh
Confidence 3444556778899999999999999999999999854 344 56789999999999999999999
Q ss_pred HHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 460 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 460 ~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|+|..+.
T Consensus 99 ~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~ 148 (169)
T d1ihga1 99 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 148 (169)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999987653
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.1e-16 Score=131.36 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcH-------H
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS-------T 473 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 473 (512)
+.|..++.+|+.++..|+|++|+.+|+++|+++|. +..+|+++|.||..+|+|++|+.+|++||+++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 45788999999999999999999999999999999 999999999999999999999999999999999875 4
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 474 AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 474 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+|+++|.++..++++++|+.+|++++.+++..
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 112 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCH
Confidence 67778889999999999999999999887653
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=7.2e-16 Score=142.56 Aligned_cols=106 Identities=17% Similarity=0.026 Sum_probs=102.5
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
+.+..++.+|.++++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 35 ~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 113 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGI 113 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhh
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 507 (512)
++..+|++++|+..|+++++++|++..
T Consensus 114 ~~~~~g~~~~A~~~~~~al~~~p~~~~ 140 (259)
T d1xnfa_ 114 ALYYGGRDKLAQDDLLAFYQDDPNDPF 140 (259)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHhhHHHHHHHHHHHHhhccccHH
Confidence 999999999999999999999998654
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.63 E-value=7e-16 Score=123.32 Aligned_cols=94 Identities=11% Similarity=0.041 Sum_probs=91.1
Q ss_pred HHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 010340 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 484 (512)
Q Consensus 405 ~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~ 484 (512)
..+..|..+++.|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+.+++++++++|+++.+|+.+|.+|..
T Consensus 18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~ 96 (112)
T d1hxia_ 18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 96 (112)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHH
Confidence 3567899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHH
Q 010340 485 LDMHKDAADMLKEAA 499 (512)
Q Consensus 485 ~~~~~~A~~~~~~al 499 (512)
+|++++|++.|+++|
T Consensus 97 ~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 97 EHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 999999999999986
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=5.6e-16 Score=125.43 Aligned_cols=101 Identities=8% Similarity=-0.005 Sum_probs=92.4
Q ss_pred HHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcC---ChHHHHHHHHHHHhhCCCc--HHHHHHHHHHH
Q 010340 408 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD---QPDAALRDAMQAQCVYPDW--STAFYMQAVAL 482 (512)
Q Consensus 408 ~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~--~~~~~~~g~~~ 482 (512)
..++.+...++|++|++.|++++.++|. ++.+++|+|.|+++.+ ++++|+..|+++++.+|.. .++|+++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 4577889999999999999999999999 9999999999998754 5667999999999999866 56999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+.+|+|++|+.+|+++|+++|+|..|+
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 999999999999999999999998764
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=2e-15 Score=133.10 Aligned_cols=102 Identities=15% Similarity=0.111 Sum_probs=94.0
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..+..+|..++..|+|++|++.|+++ .+. ++.+|+|+|.+|..+|++++|+++|++||+++|+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 45667889999999999999999999864 455 78899999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
++..+|+|++|+.+|++|+...+.|.
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~n~ 104 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRGNQ 104 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHhhccHHHHHHHHHHHHHhCccCc
Confidence 99999999999999999999877654
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.57 E-value=4.4e-15 Score=126.27 Aligned_cols=112 Identities=18% Similarity=0.194 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----------ChHHHhhhHHHhhhcCChHHHHHHHHHHHh
Q 010340 398 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----------SPTVYARRSLCHLMCDQPDAALRDAMQAQC 466 (512)
Q Consensus 398 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 466 (512)
.++.++..+...|..++..|+|++|+..|++||++.|.. ...+|.|+|.+|..+|+|++|+.+++++++
T Consensus 4 ~~~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~ 83 (156)
T d2hr2a1 4 KEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 83 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhh
Confidence 344556667777999999999999999999999987662 135799999999999999999999999998
Q ss_pred hCCC-----------cHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 467 VYPD-----------WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 467 ~~p~-----------~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+.|. ...+|+++|.+|..+|++++|+.+|++|+++.|+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~ 137 (156)
T d2hr2a1 84 YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 137 (156)
T ss_dssp HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred cccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchH
Confidence 8653 356899999999999999999999999999999876554
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.54 E-value=2.1e-15 Score=126.41 Aligned_cols=99 Identities=11% Similarity=0.028 Sum_probs=89.8
Q ss_pred hHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhc----------CChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 411 DVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC----------DQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 411 ~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
..+-+.+.|++|+..|++|++++|. ++++++++|.++..+ +++++|+..|++|++++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHH
Confidence 3456788999999999999999999 999999999999854 55689999999999999999999999999
Q ss_pred HHHHcCC-----------hHHHHHHHHHHHhchhhhhhcCC
Q 010340 481 ALAKLDM-----------HKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 481 ~~~~~~~-----------~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
+|..+|+ |++|+.+|++|++++|+|..+++
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~ 124 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 124 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHH
Confidence 9998764 79999999999999999987764
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2.7e-14 Score=136.37 Aligned_cols=107 Identities=17% Similarity=0.215 Sum_probs=99.2
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+...|..+...|++++|+..|++++..+|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 172 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 250 (323)
T d1fcha_ 172 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 250 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 566788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 483 AKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 483 ~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
..+|++++|+..|++||+++|++..++.
T Consensus 251 ~~~g~~~~A~~~~~~al~l~p~~~~~~~ 278 (323)
T d1fcha_ 251 INLGAHREAVEHFLEALNMQRKSRGPRG 278 (323)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC-----
T ss_pred HHCCCHHHHHHHHHHHHHhCCcChhhhh
Confidence 9999999999999999999999876543
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=4.6e-14 Score=124.20 Aligned_cols=102 Identities=19% Similarity=0.158 Sum_probs=94.9
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc-----------
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----------- 471 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----------- 471 (512)
+..++.+|.+++..|+|++|+..|++||+++|+ ++.+|+++|.+|.++|+|++|+.+|++|++..+.+
T Consensus 36 ~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~ 114 (192)
T d1hh8a_ 36 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 114 (192)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred HHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhh
Confidence 456889999999999999999999999999999 99999999999999999999999999999876543
Q ss_pred -----HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 472 -----STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 472 -----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
.++++++|.++..+|++++|++.|++|+++.|+.
T Consensus 115 ~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~ 153 (192)
T d1hh8a_ 115 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 153 (192)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred cccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 4789999999999999999999999999988764
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=6.9e-14 Score=133.30 Aligned_cols=111 Identities=6% Similarity=0.029 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHhHHHhhh-cHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHH
Q 010340 399 QMRDMLEARKRGDVAFREK-EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~-~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
...+..+++.+|.++.+.| ++++|+..|+++|+.+|. +..+|+++|.++..+|++++|+++++++++++|++..+|++
T Consensus 73 nP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~ 151 (315)
T d2h6fa1 73 NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQH 151 (315)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHH
Confidence 4456889999999998876 599999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 478 QAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 478 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
+|.++..+|++++|+.+|+++|+++|.+..+|.
T Consensus 152 ~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~ 184 (315)
T d2h6fa1 152 RQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 184 (315)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHH
Confidence 999999999999999999999999999988774
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=4.9e-14 Score=134.33 Aligned_cols=108 Identities=10% Similarity=-0.004 Sum_probs=101.8
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCC-hHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ-PDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
-++++...|.++.+.+++++|+..|++||+++|. +..+|+++|.++..+|+ +++|+.+++++++++|++..+|+++|.
T Consensus 42 ~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~ 120 (315)
T d2h6fa1 42 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRV 120 (315)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhH
Confidence 3556677799999999999999999999999999 99999999999999875 999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
++..+|++++|+..|+++++++|++..+|.
T Consensus 121 ~~~~l~~~~eAl~~~~kal~~dp~n~~a~~ 150 (315)
T d2h6fa1 121 LVEWLRDPSQELEFIADILNQDAKNYHAWQ 150 (315)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHhhccHHHHHHHHhhhhhhhhcchHHHH
Confidence 999999999999999999999999988874
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=9.3e-13 Score=125.40 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=98.6
Q ss_pred HHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHc
Q 010340 406 ARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKL 485 (512)
Q Consensus 406 ~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~ 485 (512)
.+++|..+++.|+|++|+..|+++|+.+|. +..+|+++|.+|..+|++++|+..|+++++++|++..+|+.+|.++..+
T Consensus 22 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 100 (323)
T d1fcha_ 22 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 100 (323)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccccccc
Confidence 467899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhchhhhhhcC
Q 010340 486 DMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 486 ~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
|++++|+..|++++.++|++...+
T Consensus 101 ~~~~~A~~~~~~~~~~~~~~~~~~ 124 (323)
T d1fcha_ 101 SLQRQACEILRDWLRYTPAYAHLV 124 (323)
T ss_dssp TCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred ccccccccchhhHHHhccchHHHH
Confidence 999999999999999999866543
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=7.6e-13 Score=128.17 Aligned_cols=108 Identities=15% Similarity=0.075 Sum_probs=102.8
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
++..+..+|..+...|++++|+..|++++...|. ...++..+|.++..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 270 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 348 (388)
T d1w3ba_ 270 FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4678889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 482 LAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 482 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
+..+|++++|+..|++|++++|++..++.
T Consensus 349 ~~~~g~~~~A~~~~~~al~l~P~~~~a~~ 377 (388)
T d1w3ba_ 349 LQQQGKLQEALMHYKEAIRISPTFADAYS 377 (388)
T ss_dssp HHTTTCCHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999999999887753
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=8.3e-13 Score=101.51 Aligned_cols=84 Identities=14% Similarity=-0.022 Sum_probs=75.0
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC------ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV------SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 476 (512)
++..+..|.++++.|+|++|+..|++|+++.|.. ...+|.++|.+|.++|++++|+..|+++|+++|+++.+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 5678899999999999999999999999875441 2678999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 010340 477 MQAVALAKLD 486 (512)
Q Consensus 477 ~~g~~~~~~~ 486 (512)
+++.+...++
T Consensus 85 Nl~~~~~~l~ 94 (95)
T d1tjca_ 85 NLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9988766543
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=1.5e-12 Score=125.99 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=95.7
Q ss_pred HHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcC
Q 010340 407 RKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLD 486 (512)
Q Consensus 407 ~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~ 486 (512)
.++|..+++.|+|++|+..|+++++.+|. +..+++.+|.+|..+|++++|+..|+++++++|+++.+|+.+|.++..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 46789999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhchhhhhh
Q 010340 487 MHKDAADMLKEAASLEEKRQR 507 (512)
Q Consensus 487 ~~~~A~~~~~~al~l~p~~~~ 507 (512)
++++|+..|.++++.+|.+..
T Consensus 82 ~~~~A~~~~~~~~~~~~~~~~ 102 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDFID 102 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTCHH
T ss_pred ccccccccccccccccccccc
Confidence 999999999999999887554
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.24 E-value=2.2e-11 Score=104.34 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
..+..+..+|.++++.|+|++|+..|++||+++|. ++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.
T Consensus 75 ~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~ 153 (169)
T d1ihga1 75 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLK 153 (169)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45677888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHH
Q 010340 481 ALAKLDMHKDAA 492 (512)
Q Consensus 481 ~~~~~~~~~~A~ 492 (512)
+...+..+.++.
T Consensus 154 ~~~~l~~~~~~~ 165 (169)
T d1ihga1 154 VKQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998887777654
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=1.8e-11 Score=112.29 Aligned_cols=96 Identities=13% Similarity=0.090 Sum_probs=85.2
Q ss_pred hhhcHHHHHHHHHHHHhcCCC---CChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHH
Q 010340 415 REKEFKTAVDCYSQFIDVGTM---VSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDA 491 (512)
Q Consensus 415 ~~~~~~~Ai~~~~~al~~~~~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A 491 (512)
...+++.|+..+++++...+. ....+|+++|.+|..+|++++|+.+|+++|+++|+++.+|+++|.++..+|++++|
T Consensus 11 ~~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A 90 (259)
T d1xnfa_ 11 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 90 (259)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHh
Confidence 345678888888998875332 15679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhhhhhcCC
Q 010340 492 ADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 492 ~~~~~~al~l~p~~~~~~~ 510 (512)
+..|+++++++|++..++.
T Consensus 91 ~~~~~~al~~~p~~~~a~~ 109 (259)
T d1xnfa_ 91 YEAFDSVLELDPTYNYAHL 109 (259)
T ss_dssp HHHHHHHHHHCTTCTHHHH
T ss_pred hhhhhHHHHHHhhhhhhHH
Confidence 9999999999999877653
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=7.9e-11 Score=101.47 Aligned_cols=106 Identities=11% Similarity=0.095 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---------------------hHHHhhhHHHhhhcCChHHH
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---------------------PTVYARRSLCHLMCDQPDAA 457 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~A 457 (512)
++.....+...|..+...|++++|+..|++|+.+.+.+. ..++.+++.++..+|++++|
T Consensus 7 D~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~A 86 (179)
T d2ff4a2 7 DLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAV 86 (179)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH
Confidence 345577899999999999999999999999999866421 14689999999999999999
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHH-------Hhchhh
Q 010340 458 LRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEA-------ASLEEK 504 (512)
Q Consensus 458 ~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a-------l~l~p~ 504 (512)
+.+++++++++|.+..+|..++.+|..+|++.+|+..|+++ +.++|.
T Consensus 87 l~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 87 IAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 99999999999999999999999999999999999999998 556654
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=2.7e-11 Score=96.85 Aligned_cols=82 Identities=10% Similarity=-0.008 Sum_probs=78.1
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..+..+|.++++.|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+.+|+++++++|+++.++..++.
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 113 (117)
T d1elwa_ 35 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 113 (117)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred cchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45888999999999999999999999999999999 99999999999999999999999999999999999999999988
Q ss_pred HHH
Q 010340 481 ALA 483 (512)
Q Consensus 481 ~~~ 483 (512)
+..
T Consensus 114 l~~ 116 (117)
T d1elwa_ 114 MEA 116 (117)
T ss_dssp HHH
T ss_pred HhC
Confidence 753
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=4.4e-11 Score=102.49 Aligned_cols=90 Identities=14% Similarity=0.195 Sum_probs=83.8
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
...+..+|.++++.|+|++|+..+++||+++|. +..+|+++|.||..+|+|++|+.+|+++++++|+++.+...++.++
T Consensus 62 ~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 140 (170)
T d1p5qa1 62 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 140 (170)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445677999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHH
Q 010340 483 AKLDMHKDAAD 493 (512)
Q Consensus 483 ~~~~~~~~A~~ 493 (512)
..++++.+...
T Consensus 141 ~~~~~~~~~e~ 151 (170)
T d1p5qa1 141 QRIRRQLAREK 151 (170)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98888776543
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.18 E-value=6.8e-11 Score=101.08 Aligned_cols=96 Identities=15% Similarity=0.165 Sum_probs=85.9
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
+..+..+|.++++.|+|++|+..++++|+++|. +..+|+++|.+|..+|+|++|+.+|.++++++|++..++..++.+.
T Consensus 64 ~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 142 (168)
T d1kt1a1 64 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQ 142 (168)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHH-HHHHHHHHH
Q 010340 483 AKLDMHKD-AADMLKEAA 499 (512)
Q Consensus 483 ~~~~~~~~-A~~~~~~al 499 (512)
..++++.+ ....|.+.+
T Consensus 143 ~~~~~~~e~~kk~~~~~f 160 (168)
T d1kt1a1 143 KKAKEHNERDRRTYANMF 160 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHH
Confidence 88887765 344444433
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=1.9e-11 Score=93.67 Aligned_cols=74 Identities=11% Similarity=-0.092 Sum_probs=67.7
Q ss_pred ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc-------HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 437 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW-------STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+++-++++|.++++.|+|.+|+..|++|+++.|.+ +++++++|.+++.+|++++|+..|+++|+++|++..++
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 45678899999999999999999999999986644 78999999999999999999999999999999998876
Q ss_pred C
Q 010340 510 R 510 (512)
Q Consensus 510 ~ 510 (512)
.
T Consensus 84 ~ 84 (95)
T d1tjca_ 84 G 84 (95)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=1.3e-10 Score=98.22 Aligned_cols=96 Identities=17% Similarity=0.056 Sum_probs=85.2
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 480 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~ 480 (512)
.++..+..+|.+++..|++++|+..|+++|+++|. +..+|+++|.++..+|++++|+.+++++++++|+++.++..++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~ 120 (159)
T d1a17a_ 42 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 120 (159)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45889999999999999999999999999999999 99999999999999999999999999999999999999998887
Q ss_pred HHHH--cCChHHHHHHHHH
Q 010340 481 ALAK--LDMHKDAADMLKE 497 (512)
Q Consensus 481 ~~~~--~~~~~~A~~~~~~ 497 (512)
+... .+.+++|+.....
T Consensus 121 ~~~~~~~~~~~~a~~~~~~ 139 (159)
T d1a17a_ 121 CNKIVKQKAFERAIAGDEH 139 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHH
Confidence 7544 4446666654433
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=5.4e-11 Score=96.68 Aligned_cols=72 Identities=13% Similarity=-0.008 Sum_probs=68.1
Q ss_pred hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 438 PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+..+-++|.+++..|+|++|+.+|+++|+++|+++.+++++|.+|..+|+|++|+.+|++|++++|++..+|
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 456778999999999999999999999999999999999999999999999999999999999999987665
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.12 E-value=5.4e-11 Score=94.18 Aligned_cols=72 Identities=15% Similarity=-0.013 Sum_probs=68.7
Q ss_pred HHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 439 TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
..++++|.++++.|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..+|.
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 88 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHA 88 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccchH
Confidence 457889999999999999999999999999999999999999999999999999999999999999988764
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.12 E-value=1.1e-10 Score=98.16 Aligned_cols=84 Identities=11% Similarity=0.120 Sum_probs=78.6
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 482 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 482 (512)
...+..+|.++++.|+|++|+..|++||+++|. +..+|+++|.+|..+|++++|+.+|+++++++|++..+...++.+.
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 145 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 446778999999999999999999999999999 9999999999999999999999999999999999999999999988
Q ss_pred HHcCC
Q 010340 483 AKLDM 487 (512)
Q Consensus 483 ~~~~~ 487 (512)
.++++
T Consensus 146 ~kl~~ 150 (153)
T d2fbna1 146 NKLKE 150 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76644
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.09 E-value=8.8e-11 Score=103.17 Aligned_cols=74 Identities=12% Similarity=0.015 Sum_probs=70.5
Q ss_pred ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 437 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
++..+.+.|..|++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+|.
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~ 76 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 76 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999988764
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.98 E-value=4.4e-10 Score=93.23 Aligned_cols=92 Identities=13% Similarity=0.027 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHhHHHh----------hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCC-----------hHHH
Q 010340 399 QMRDMLEARKRGDVAFR----------EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ-----------PDAA 457 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~----------~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~-----------~~~A 457 (512)
..+++..+..+|.+++. .+.+++|+..|++||+++|+ +..+|+++|.+|..+|+ |++|
T Consensus 27 ~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A 105 (145)
T d1zu2a1 27 NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLA 105 (145)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHHh
Confidence 33568889999999874 46678999999999999999 99999999999988764 7999
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHH
Q 010340 458 LRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDA 491 (512)
Q Consensus 458 ~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A 491 (512)
+++|++|++++|++..++..++.+....+.+.++
T Consensus 106 ~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 106 TQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887666655554
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=8.7e-10 Score=88.26 Aligned_cols=85 Identities=7% Similarity=-0.005 Sum_probs=74.9
Q ss_pred HHHHHHHHHHhHHHh---hhcHHHHHHHHHHHHhcCCCC-ChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHH
Q 010340 401 RDMLEARKRGDVAFR---EKEFKTAVDCYSQFIDVGTMV-SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 476 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~---~~~~~~Ai~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 476 (512)
.++..++..|.++++ .+++++|+..|++++..+|.. ..++|+++|.+|.++|+|++|+.+|+++|+++|++..|..
T Consensus 31 ~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~ 110 (122)
T d1nzna_ 31 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 110 (122)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHH
Confidence 347888999999986 667888999999999998762 2468999999999999999999999999999999999999
Q ss_pred HHHHHHHHc
Q 010340 477 MQAVALAKL 485 (512)
Q Consensus 477 ~~g~~~~~~ 485 (512)
.++.+..++
T Consensus 111 l~~~I~~~~ 119 (122)
T d1nzna_ 111 LERLIDKAM 119 (122)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=3.4e-10 Score=114.31 Aligned_cols=107 Identities=8% Similarity=-0.041 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHH
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 479 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g 479 (512)
.+.+..+...|..+.+.|++++|+..|++++..++ ..++.++|.++...|+|++|+.+|++|++++|+++.+|+++|
T Consensus 117 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~---~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg 193 (497)
T d1ya0a1 117 LPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC---QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLA 193 (497)
T ss_dssp --------------------------CCHHHHHHH---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHH
T ss_pred hhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCH---HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 34566788899999999999999999999998854 468889999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 480 VALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 480 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.++...|++.+|+.+|.+||.++|....|+
T Consensus 194 ~~~~~~~~~~~A~~~y~ral~~~~~~~~a~ 223 (497)
T d1ya0a1 194 ILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223 (497)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSSBCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCCCHHHH
Confidence 999999999999999999999999877665
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.85 E-value=4.1e-09 Score=98.27 Aligned_cols=106 Identities=13% Similarity=0.054 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcC-----CCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc---
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVG-----TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--- 471 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--- 471 (512)
.+.++.|...|+.+...|+|++|+++|.+|+++. +.....+|.++|.||.++|++++|++.+++++++.+..
T Consensus 34 ~~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~ 113 (290)
T d1qqea_ 34 EEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF 113 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccc
Confidence 3446778888999999999999999999999862 22135789999999999999999999999999988766
Q ss_pred ---HHHHHHHHHHHHH-cCChHHHHHHHHHHHhchhhh
Q 010340 472 ---STAFYMQAVALAK-LDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 472 ---~~~~~~~g~~~~~-~~~~~~A~~~~~~al~l~p~~ 505 (512)
..++.++|.++.. +|++++|+..|++|+++.+..
T Consensus 114 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~ 151 (290)
T d1qqea_ 114 RRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 6789999998865 799999999999999987753
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.82 E-value=7.3e-09 Score=94.62 Aligned_cols=101 Identities=9% Similarity=0.045 Sum_probs=84.4
Q ss_pred HHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHH----------
Q 010340 409 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ---------- 478 (512)
Q Consensus 409 ~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~---------- 478 (512)
++..+++.|++++|+..|+++|+.+|. +..++.+++.+|...|++++|+..|+++++++|++..++..+
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 356778999999999999999999999 999999999999999999999999999998888776666555
Q ss_pred -------------------------HHHHHHcCChHHHHHHHHHHHhchhhhhhcCC
Q 010340 479 -------------------------AVALAKLDMHKDAADMLKEAASLEEKRQRSGR 510 (512)
Q Consensus 479 -------------------------g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 510 (512)
+.++...|++++|+..++++.++.|.....|.
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~~ 137 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLAN 137 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEET
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCcccc
Confidence 44445557888888888888888887665554
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.81 E-value=6.7e-09 Score=98.75 Aligned_cols=105 Identities=9% Similarity=-0.074 Sum_probs=75.2
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCC--hHHHHHHHHHHHhhCCCcHHHH-HHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ--PDAALRDAMQAQCVYPDWSTAF-YMQAV 480 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~~~p~~~~~~-~~~g~ 480 (512)
..+...+..+...|++++|+.+|+++++.+|. +..+|+++|.++..+++ +++|+..+.++++++|.+..++ +.+|.
T Consensus 74 ~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~ 152 (334)
T d1dcea1 74 QHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFV 152 (334)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHH
Confidence 33444455566667777777777777777777 77777777777666654 6777777777777777777765 45667
Q ss_pred HHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 481 ALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 481 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
++...+++++|+..|+++++++|.+..+|
T Consensus 153 ~~~~~~~~~~Al~~~~~~i~~~p~~~~a~ 181 (334)
T d1dcea1 153 AAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (334)
T ss_dssp HHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred HHHhccccHHHHHHHHHHHHcCCCCHHHH
Confidence 77777777777777777777777776665
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.73 E-value=2.9e-08 Score=94.22 Aligned_cols=94 Identities=13% Similarity=0.056 Sum_probs=82.9
Q ss_pred hhhc-HHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcC----------ChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 415 REKE-FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD----------QPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 415 ~~~~-~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~----------~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
+.+. .++|+..++++|+.+|+ +..+|+.++.++..++ ++++|+.+++++++.+|+++.+|+.+|.++.
T Consensus 40 ~~~~~~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~~ 118 (334)
T d1dcea1 40 QAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118 (334)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHHH
Confidence 3443 48999999999999999 9999988887766554 4899999999999999999999999999999
Q ss_pred HcCC--hHHHHHHHHHHHhchhhhhhcC
Q 010340 484 KLDM--HKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 484 ~~~~--~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.+++ +++|+..++++++++|++..+|
T Consensus 119 ~~~~~~~~~a~~~~~~al~~~~~~~~~~ 146 (334)
T d1dcea1 119 RLPEPNWARELELCARFLEADERNFHCW 146 (334)
T ss_dssp TCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhccccHHHHHHHHHHHHhhCchhhhhh
Confidence 9876 8999999999999999987664
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.70 E-value=1.7e-08 Score=93.89 Aligned_cols=105 Identities=12% Similarity=-0.107 Sum_probs=90.3
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCC-----ChHHHhhhHHHhhh-cCChHHHHHHHHHHHhhCCC-----
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLM-CDQPDAALRDAMQAQCVYPD----- 470 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~-----~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~----- 470 (512)
.+..|...|.++.+.|++++|+..|++++++.+.. ...++.++|.+|.. +|++++|++.|++|+++.+.
T Consensus 76 ~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~ 155 (290)
T d1qqea_ 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (290)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 36778899999999999999999999999875441 15678899988865 79999999999999988543
Q ss_pred -cHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhh
Q 010340 471 -WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 471 -~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 506 (512)
...++.++|.++..+|+|++|+..|++++.+.+.+.
T Consensus 156 ~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~ 192 (290)
T d1qqea_ 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred hhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccch
Confidence 356799999999999999999999999999988754
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.66 E-value=7.9e-08 Score=90.69 Aligned_cols=107 Identities=10% Similarity=-0.090 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC----hHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCc---
Q 010340 399 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS----PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--- 471 (512)
Q Consensus 399 ~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--- 471 (512)
..-.++....+|.+++..|++++|+..|+++++..|... ..++.++|.+|..+|++++|+..|++++++.+..
T Consensus 8 ~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 87 (366)
T d1hz4a_ 8 DTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW 87 (366)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcch
Confidence 334577777899999999999999999999999988732 3578899999999999999999999999876543
Q ss_pred ---HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 472 ---STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 472 ---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
..+++.+|.++...|++..|...+.+++.+.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~ 124 (366)
T d1hz4a_ 88 HYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhc
Confidence 5678899999999999999999999999988764
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.63 E-value=6.3e-08 Score=88.47 Aligned_cols=137 Identities=11% Similarity=-0.034 Sum_probs=92.0
Q ss_pred cccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcC-CCCCccceEEEEeeCCeeEEEEEc
Q 010340 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEY 151 (512)
Q Consensus 73 ~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~ 151 (512)
++++..+-++.+.||+... .+..+.||+...........+.+|+.++..+ .+--+.+++.++.+++..++||++
T Consensus 17 ~~~~~~~G~s~~~v~rv~~-----~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~ 91 (263)
T d1j7la_ 17 RCVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp EEEECSCCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred EEEEcCCCCCCCcEEEEEe-----CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEe
Confidence 3444444445578998764 3445788988766555556788999998877 355578889999889999999999
Q ss_pred cCCCCHHhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 010340 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE---------------------------------------- 191 (512)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~---------------------------------------- 191 (512)
++|.++.+..... .. ...++.++++.|..||+.
T Consensus 92 l~G~~~~~~~~~~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T d1j7la_ 92 ADGVLCSEEYEDE----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp CSSEEHHHHTTTC----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSC
T ss_pred ccccccccccccc----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccc
Confidence 9998876544210 01 111223333333333321
Q ss_pred -----------------C-CccccccCccceeecCCCCCeeecccCcc
Q 010340 192 -----------------G-RPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 192 -----------------~-~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
. .++|+|+.|.|||+++++..-|+||+.+.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 0 15899999999999977666799998764
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.60 E-value=9.5e-08 Score=74.56 Aligned_cols=76 Identities=8% Similarity=-0.001 Sum_probs=63.2
Q ss_pred CCCChHHHhhhHHHhhhcC---ChHHHHHHHHHHHhhCCCc-HHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 434 TMVSPTVYARRSLCHLMCD---QPDAALRDAMQAQCVYPDW-STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~-~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
+.....+.|+.|.|+.+.. +.++||..++++++.+|.+ .+.+|++|.+|+++|+|++|+.+++++|+++|+|..|+
T Consensus 31 ~~~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~ 110 (124)
T d2pqrb1 31 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 110 (124)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHH
Confidence 3335778888888888654 4568999999999988876 48999999999999999999999999999999988775
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.47 E-value=1.7e-07 Score=78.27 Aligned_cols=70 Identities=19% Similarity=0.101 Sum_probs=60.8
Q ss_pred hHHHhhh--HHHhhhcCChHHHHHHHHHHHhhCCCc------------HHHHHHHHHHHHHcCChHHHHHHHHHHHhchh
Q 010340 438 PTVYARR--SLCHLMCDQPDAALRDAMQAQCVYPDW------------STAFYMQAVALAKLDMHKDAADMLKEAASLEE 503 (512)
Q Consensus 438 ~~~~~~~--~~~~~~~~~~~~A~~~~~~al~~~p~~------------~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 503 (512)
..+|..+ |..++..|+|++|+..|++||++.|+. +.+|.++|.+|..+|+|++|+.+|++++++.|
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3455554 778889999999999999999999875 36899999999999999999999999999988
Q ss_pred hhhh
Q 010340 504 KRQR 507 (512)
Q Consensus 504 ~~~~ 507 (512)
+...
T Consensus 87 ~~~~ 90 (156)
T d2hr2a1 87 RRGE 90 (156)
T ss_dssp HHCC
T ss_pred cccc
Confidence 7544
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.46 E-value=3e-07 Score=86.55 Aligned_cols=103 Identities=9% Similarity=-0.010 Sum_probs=90.4
Q ss_pred HHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCC---hHHHhhhHHHhhhcCChHHHHHHHHHHHh------hCCCcHH
Q 010340 403 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQC------VYPDWST 473 (512)
Q Consensus 403 ~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~------~~p~~~~ 473 (512)
+..+...|..+...|++++|+..++++++..+... ...+.++|.+|..+|++++|+..+++++. ..|....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 292 (366)
T d1hz4a_ 213 SNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNR 292 (366)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHH
Confidence 55677789999999999999999999998876632 45678899999999999999999999984 4567789
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhchhhh
Q 010340 474 AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 474 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 505 (512)
+++.+|.+|..+|++++|+..|++|+++.+..
T Consensus 293 ~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~ 324 (366)
T d1hz4a_ 293 NLLLLNQLYWQAGRKSDAQRVLLDALKLANRT 324 (366)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999997753
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.43 E-value=3.5e-07 Score=91.65 Aligned_cols=85 Identities=13% Similarity=-0.031 Sum_probs=79.7
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
....+..+|..+..+|+|++|+.+|++|++++|. +..+|+++|.++...|++.+|+.+|.+|+.++|.++.|+.+++.+
T Consensus 151 ~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~ 229 (497)
T d1ya0a1 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3467888999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCC
Q 010340 482 LAKLDM 487 (512)
Q Consensus 482 ~~~~~~ 487 (512)
+....+
T Consensus 230 ~~~~~~ 235 (497)
T d1ya0a1 230 LSKALE 235 (497)
T ss_dssp HHHHTT
T ss_pred HHHhhh
Confidence 876553
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.42 E-value=5.6e-07 Score=70.10 Aligned_cols=80 Identities=5% Similarity=-0.154 Sum_probs=67.9
Q ss_pred HHHHHHhHHH---hhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 010340 405 EARKRGDVAF---REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 481 (512)
Q Consensus 405 ~~~~~g~~~~---~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 481 (512)
.-+..|..+. ...+.++||..+++++..+|....++++++|.+|+++|+|++|..+++++|+++|++.+|...+-.+
T Consensus 37 t~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~I 116 (124)
T d2pqrb1 37 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 116 (124)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHHH
Confidence 4455666665 4467889999999999998873468999999999999999999999999999999999998877666
Q ss_pred HHH
Q 010340 482 LAK 484 (512)
Q Consensus 482 ~~~ 484 (512)
..+
T Consensus 117 e~~ 119 (124)
T d2pqrb1 117 EDK 119 (124)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.18 E-value=5.3e-06 Score=77.17 Aligned_cols=100 Identities=11% Similarity=0.044 Sum_probs=87.5
Q ss_pred HHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhh-hcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 405 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHL-MCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 405 ~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
.+...+....+.|++++|...|.++++..|. ....|...|.... ..|+.+.|...|+++++..|+++..|...+..+.
T Consensus 136 ~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~ 214 (308)
T d2onda1 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 3566677778889999999999999999988 8888888887644 4688999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHhchhhh
Q 010340 484 KLDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 484 ~~~~~~~A~~~~~~al~l~p~~ 505 (512)
..|+++.|+..|++|++..|.+
T Consensus 215 ~~g~~~~aR~~fe~ai~~~~~~ 236 (308)
T d2onda1 215 HLNEDNNTRVLFERVLTSGSLP 236 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSC
T ss_pred HcCChHHHHHHHHHHHHhCCCC
Confidence 9999999999999999977643
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.17 E-value=5.7e-06 Score=76.96 Aligned_cols=106 Identities=8% Similarity=-0.055 Sum_probs=94.2
Q ss_pred HHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 010340 404 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 483 (512)
Q Consensus 404 ~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~ 483 (512)
..+...+....+.|++++|...|+++++..|.+...+|..++......|++++|.+.|+++++..|.....|...|....
T Consensus 100 ~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~ 179 (308)
T d2onda1 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 34566788888999999999999999999888445689999999999999999999999999999999999999998754
Q ss_pred -HcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 484 -KLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 484 -~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
..|+.+.|...|+++++..|.+...|
T Consensus 180 ~~~~~~~~a~~i~e~~l~~~p~~~~~w 206 (308)
T d2onda1 180 YCSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhccCHHHHHHHHHHHHHhhhhhHHHH
Confidence 46899999999999999999987655
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.14 E-value=2.7e-06 Score=82.09 Aligned_cols=77 Identities=16% Similarity=0.139 Sum_probs=51.2
Q ss_pred cccCCCCCCCeEEEEEEcCCCCCceEEEEEecCcc------CC-CChhHHHHHHHHHhcC-CC--CCccceEEEEeeCCe
Q 010340 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH------AW-PDPKQFADEAWGVGKL-RH--KRLANLIGYCCDGDE 144 (512)
Q Consensus 75 i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~------~~-~~~~~~~~E~~~l~~l-~h--~niv~l~~~~~~~~~ 144 (512)
+++||.|..+.||++.... +++.|+||.-... .+ ....+...|.+.|..+ .+ ..+++++.+. ...
T Consensus 31 ~~eig~G~~N~vfrV~~~~---~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~ 105 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQE---HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEM 105 (392)
T ss_dssp EEECCSSSSEEEEEEEC-------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTT
T ss_pred EEEeCCCceEeEEEEEeCC---CCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCC
Confidence 5578999999999998765 5677999965431 11 1334567788888776 33 3466676554 455
Q ss_pred eEEEEEccCCCC
Q 010340 145 RLLVAEYMPNDT 156 (512)
Q Consensus 145 ~~lv~E~~~~g~ 156 (512)
.++|||++.+..
T Consensus 106 ~~lvmE~L~~~~ 117 (392)
T d2pula1 106 AVTVMEDLSHLK 117 (392)
T ss_dssp TEEEECCCTTSE
T ss_pred CEEEEeccCCcc
Confidence 689999998754
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.14 E-value=1.7e-06 Score=78.51 Aligned_cols=64 Identities=16% Similarity=-0.043 Sum_probs=59.7
Q ss_pred HHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHhchhhhhhcC
Q 010340 446 LCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 509 (512)
Q Consensus 446 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 509 (512)
.-.+..|++++|+..++++++.+|+++.++..+|.+|+..|++++|+..|+++++++|++..++
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~ 67 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 67 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 4467789999999999999999999999999999999999999999999999999999987654
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.10 E-value=5.5e-06 Score=74.67 Aligned_cols=68 Identities=21% Similarity=0.193 Sum_probs=50.8
Q ss_pred CeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCC--CCCccceEEEEeeCCeeEEEEEccCCCCHH
Q 010340 84 NVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR--HKRLANLIGYCCDGDERLLVAEYMPNDTLA 158 (512)
Q Consensus 84 g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~E~~~~g~L~ 158 (512)
+.||+.... .+..+.||...... ...+..|+..++.+. .-.+.+++.++.+++..++||++++|.++.
T Consensus 25 ~~v~r~~~~----~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 25 AAVFRLSAQ----GRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 94 (255)
T ss_dssp CEEEEEECT----TSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred CeEEEEEeC----CCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence 578988865 45558889876543 235778888888773 334678888888888899999999986653
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.10 E-value=1.3e-05 Score=72.53 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=87.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCcHHHHHH
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWSTAFYM 477 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~ 477 (512)
++.+++.+|..++.++||++|+++|++|.+. . +..+++++|.+|.. ..++..|+..+..+.+.. ++.+.+.
T Consensus 1 ~p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~ 75 (265)
T d1ouva_ 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHL 75 (265)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhc
Confidence 4678999999999999999999999999887 3 68899999999997 679999999999987654 8899999
Q ss_pred HHHHHHH----cCChHHHHHHHHHHHhchhhhh
Q 010340 478 QAVALAK----LDMHKDAADMLKEAASLEEKRQ 506 (512)
Q Consensus 478 ~g~~~~~----~~~~~~A~~~~~~al~l~p~~~ 506 (512)
+|.++.. ..+.+.|...|+++.+.++...
T Consensus 76 l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~a 108 (265)
T d1ouva_ 76 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEG 108 (265)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHH
T ss_pred cccccccccccchhhHHHHHHHhhhhhhhhhhH
Confidence 9998876 4689999999999998766543
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.90 E-value=2.8e-05 Score=65.76 Aligned_cols=69 Identities=7% Similarity=0.055 Sum_probs=63.4
Q ss_pred HHHHHHHHHhHHHhhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHH-------HhhCCCc
Q 010340 402 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA-------QCVYPDW 471 (512)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-------l~~~p~~ 471 (512)
....+..+|..+.+.|+|++|+..++++++.+|. +..+|.+++.+|..+|++.+|+..|+++ +.++|..
T Consensus 66 ~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 66 KVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 3677888999999999999999999999999999 9999999999999999999999999997 4566754
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.86 E-value=6.3e-05 Score=60.09 Aligned_cols=86 Identities=9% Similarity=-0.058 Sum_probs=74.9
Q ss_pred hhhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH----cC
Q 010340 415 REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK----LD 486 (512)
Q Consensus 415 ~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~----~~ 486 (512)
...++++|+..|+++.+. . ++.+.+++|.+|.. ..++++|++.|+++.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 456899999999999987 3 68899999999986 56799999999999886 589999999999987 56
Q ss_pred ChHHHHHHHHHHHhchhhh
Q 010340 487 MHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 487 ~~~~A~~~~~~al~l~p~~ 505 (512)
++++|+.+|++|.++....
T Consensus 110 d~~~A~~~~~~Aa~~G~~~ 128 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSED 128 (133)
T ss_dssp CHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHCCCHH
Confidence 9999999999999876543
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.68 E-value=0.00012 Score=65.85 Aligned_cols=99 Identities=15% Similarity=0.061 Sum_probs=83.9
Q ss_pred HHHHHHHHHhHHHh----hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhh----cCChHHHHHHHHHHHhhCCCcHH
Q 010340 402 DMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWST 473 (512)
Q Consensus 402 ~~~~~~~~g~~~~~----~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 473 (512)
+...+..+|..+.. ..+...+...++.+.+. . +..+.+++|.+|.. .+++++|+.+|.++.+. .++.
T Consensus 141 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~ 215 (265)
T d1ouva_ 141 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGG 215 (265)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred ccchhhhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHH
Confidence 35566777777765 57788999999999876 3 68999999999997 67999999999999988 4799
Q ss_pred HHHHHHHHHHH----cCChHHHHHHHHHHHhchhhh
Q 010340 474 AFYMQAVALAK----LDMHKDAADMLKEAASLEEKR 505 (512)
Q Consensus 474 ~~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~~ 505 (512)
+++++|.+|+. ..++++|+.+|++|.++....
T Consensus 216 a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~ 251 (265)
T d1ouva_ 216 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 251 (265)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHH
Confidence 99999999986 458999999999999887654
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.47 E-value=0.00033 Score=55.63 Aligned_cols=81 Identities=11% Similarity=0.038 Sum_probs=67.8
Q ss_pred hhcHHHHHHHHHHHHhcCCCCChHHHhhhHHHhhhcCChHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH----cCChHHH
Q 010340 416 EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK----LDMHKDA 491 (512)
Q Consensus 416 ~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~----~~~~~~A 491 (512)
.+|+++|+.+|++|.+.+ +..+.++++. ....++++|+..++++.+. .++.+++.+|.+|.. ..++++|
T Consensus 6 ~kd~~~A~~~~~kaa~~g---~~~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A 78 (133)
T d1klxa_ 6 KKDLKKAIQYYVKACELN---EMFGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHTT---CTTHHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHCC---Chhhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHH
Confidence 468999999999999884 4556666664 4457899999999999886 689999999999987 5689999
Q ss_pred HHHHHHHHhchh
Q 010340 492 ADMLKEAASLEE 503 (512)
Q Consensus 492 ~~~~~~al~l~p 503 (512)
+.+|+++.+...
T Consensus 79 ~~~~~~aa~~g~ 90 (133)
T d1klxa_ 79 AQYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHhhhhccCc
Confidence 999999987654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.00067 Score=62.95 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=61.6
Q ss_pred cccccCHHHHHHHhcCCC--cccccccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCC
Q 010340 53 AFAEFSLADLRAATNNFS--SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHK 130 (512)
Q Consensus 53 ~~~~~~~~~~~~~~~~f~--~~~~i~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 130 (512)
.+..++.+.+..+..++. ....+..|+ +.-..||++... +|..|++|+.+.... +.+++..|...+..|...
T Consensus 4 ~f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~----dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~ 77 (325)
T d1zyla1 4 TFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE----DRRRFVVKFYRPERW-TADQILEEHQFALQLVND 77 (325)
T ss_dssp CCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT----TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHT
T ss_pred CccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcC----CCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhc
Confidence 455677777777765542 111122233 345789999886 566699999876543 457788899988887422
Q ss_pred Cc--cceE-----EEEeeCCeeEEEEEccCCCC
Q 010340 131 RL--ANLI-----GYCCDGDERLLVAEYMPNDT 156 (512)
Q Consensus 131 ni--v~l~-----~~~~~~~~~~lv~E~~~~g~ 156 (512)
+| +..+ ..+...+..+.++++++|..
T Consensus 78 gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 78 EVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp TCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred CCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 22 1111 12344677889999998743
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.12 E-value=0.00077 Score=64.39 Aligned_cols=78 Identities=15% Similarity=0.191 Sum_probs=54.2
Q ss_pred ccccCCCCCCCeEEEEEEcCCCC----CceEEEEEecCccCCCChhHHHHHHHHHhcCC-CCCccceEEEEeeCCeeEEE
Q 010340 74 IVSESGEKAPNVVYKGRLQDGND----NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLV 148 (512)
Q Consensus 74 ~i~~lG~G~~g~Vy~~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 148 (512)
-++.|+-|-...+|++....+.. ..+.|.+++... . .......+|..+++.+. +.-..++++++.+ .+|
T Consensus 46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I 119 (395)
T d1nw1a_ 46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-P-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 119 (395)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-C-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-c-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceE
Confidence 36788889999999998765321 234577777652 2 23445678999999884 4445688888753 689
Q ss_pred EEccCCCCH
Q 010340 149 AEYMPNDTL 157 (512)
Q Consensus 149 ~E~~~~g~L 157 (512)
|||++|.+|
T Consensus 120 ~efi~g~~l 128 (395)
T d1nw1a_ 120 EEYIPSRPL 128 (395)
T ss_dssp ECCCCEEEC
T ss_pred EEEeccccC
Confidence 999988554
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.61 E-value=0.0021 Score=59.14 Aligned_cols=158 Identities=11% Similarity=-0.038 Sum_probs=87.1
Q ss_pred ccCHHHHHHHhcCCCccccc--ccCCCCCCCeEEEEEEcCCCCCceEEEEEecCccCCCChhHHHHHHHHHhcCCCCC--
Q 010340 56 EFSLADLRAATNNFSSDFIV--SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR-- 131 (512)
Q Consensus 56 ~~~~~~~~~~~~~f~~~~~i--~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-- 131 (512)
..+.+|+.....+|.-..+. ..|..|--.+.|+....+ + .+++|+..... +.+.+..|+++|..|...+
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~----g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~p 74 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK----D-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLS 74 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS----C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECC----C-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhcccc
Confidence 35678888888887543333 335677778899988753 3 38999986542 3456677788888774322
Q ss_pred ccceEE------EEeeCCeeEEEEEccCCCCHHhhh--------------hhc--------CCCC---------------
Q 010340 132 LANLIG------YCCDGDERLLVAEYMPNDTLAKHL--------------FHW--------ENQT--------------- 168 (512)
Q Consensus 132 iv~l~~------~~~~~~~~~lv~E~~~~g~L~~~l--------------~~~--------~~~~--------------- 168 (512)
+...+- +.........++.++.+......- +.. ....
T Consensus 75 vp~pi~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (316)
T d2ppqa1 75 CPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEER 154 (316)
T ss_dssp CCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGG
T ss_pred ccccceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHh
Confidence 211111 122345567778877764332100 000 0000
Q ss_pred --CCHHHHHHHHHHHHHHHHHHhc----CCCccccccCccceeecCCCCCeeecccCcc
Q 010340 169 --IEWAMRLRVALYIAEALDYCSS----EGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (512)
Q Consensus 169 --l~~~~~~~i~~~i~~~L~~LH~----~~~iiH~Dlkp~Nill~~~~~~kl~Dfg~a~ 221 (512)
.........+..+...+.-.+. .+ +||+|+.+.||+++.+...-|.||+.+.
T Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~L~~g-iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 155 ADEVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp GGGTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhcchhHHHHHHHHHHhhhccCccccccc-cccCCcchhhhhcccccceeEecccccc
Confidence 0011112223333333333332 23 8999999999999988777899999764
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.22 E-value=0.37 Score=32.83 Aligned_cols=31 Identities=13% Similarity=0.279 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhHHHhhhcHHHHHHHHHHHHh
Q 010340 401 RDMLEARKRGDVAFREKEFKTAVDCYSQFID 431 (512)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~ 431 (512)
+-|=.+-.+|+.+.+.|+|++||+++++|..
T Consensus 6 N~AH~~~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 6 NLAHQQSRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455677789999999999999999988764
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=85.99 E-value=0.48 Score=33.80 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc
Q 010340 400 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV 432 (512)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~ 432 (512)
+..|..+..+|..+-+.|+|++|+.+|.+||+.
T Consensus 12 ~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~ 44 (93)
T d1wfda_ 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345778888899999999999999999998764
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.87 E-value=0.48 Score=32.45 Aligned_cols=35 Identities=6% Similarity=0.263 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhHHHhhhcHHHHHHHHHHHHhc
Q 010340 398 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV 432 (512)
Q Consensus 398 ~~~~~~~~~~~~g~~~~~~~~~~~Ai~~~~~al~~ 432 (512)
..++.+..+..+|..+-+.|+|++|+.+|.+|++.
T Consensus 6 ~~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~~ 40 (77)
T d1wr0a1 6 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 40 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34567888888888888889988888888888764
|