BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010341
(512 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ATB4|TAD2B_ARATH Transcriptional adapter ADA2b OS=Arabidopsis thaliana GN=ADA2B PE=1
SV=1
Length = 487
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/487 (66%), Positives = 383/487 (78%), Gaps = 36/487 (7%)
Query: 24 LQPGQGAGEGKRALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPY 83
L PG G GK Y+C+YC KDITGKIRIKCAVCPDFDLCIEC SVG E+ PHK +HPY
Sbjct: 35 LVPGAEGG-GK---YNCDYCQKDITGKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHPY 90
Query: 84 RVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMN 143
RVM NL+FPLICPDW+ADDE+LLLEG+E+YGLGNWAE+AEHVGTK+KE C+EHY N+Y+N
Sbjct: 91 RVMGNLTFPLICPDWSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQCLEHYRNIYLN 150
Query: 144 SPFFPLPDMSHVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHK 203
SPFFPLPDMSHV GKNRKEL AMAKG IDDKK E +KEE PFSP +VK+E+ K
Sbjct: 151 SPFFPLPDMSHVAGKNRKELQAMAKGRIDDKK-----AEQNMKEEYPFSPPKVKVEDTQK 205
Query: 204 VGPSGRGLNADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAE 263
+ +RS GKKPV++ + SLVELS YN KR+EFDPEYDNDAEQLLAE
Sbjct: 206 ----------ESFVDRSFGGKKPVSTSVNN-SLVELSNYNQKREEFDPEYDNDAEQLLAE 254
Query: 264 MEFKDADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEERELCR 323
MEFK+ D+ EE ++KLRVLRIYSKRLDERKRRK+FI+ERNLLYPNPFEKDLS EE+ CR
Sbjct: 255 MEFKENDTPEEHELKLRVLRIYSKRLDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCR 314
Query: 324 RYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREA 383
R DVFMRFHSKE+H++LL+ V+SE+R +KR++DLKEA+ AGCR++AEA+RYL KR RE
Sbjct: 315 RLDVFMRFHSKEEHDELLRNVVSEYRMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKREN 374
Query: 384 EEASRRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLYIMGFNET 443
EE R KE G G +A E SRP QASSS+VNDL ++GF E+
Sbjct: 375 EEGMNRGKESGQFGQ---------IAGE-------MGSRPPVQASSSYVNDLDLIGFTES 418
Query: 444 QLLSEAEKRLCCEIRLAPPLYLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDM 503
QLLSE+EKRLC E++L PP+YL+MQ+VMS EIF GNV K+DA+ LFKI+P+K+DRVYDM
Sbjct: 419 QLLSESEKRLCSEVKLVPPVYLQMQQVMSHEIFKGNVTKKSDAYSLFKIDPTKVDRVYDM 478
Query: 504 LVKKGLA 510
LVKKG+A
Sbjct: 479 LVKKGIA 485
>sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica
GN=ADA2 PE=2 SV=2
Length = 567
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 300/510 (58%), Positives = 364/510 (71%), Gaps = 41/510 (8%)
Query: 37 LYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICP 96
LYHCNYCNKDI+GKIRIKC+ CPDFDLC+ECFSVG EV PH+SNHPYRVMDNLSFPLICP
Sbjct: 50 LYHCNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNLSFPLICP 109
Query: 97 DWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVV 156
DWNAD+EILLLEGIEMYGLGNWAE+AEHVGTKTK CI+HYT YMNSP +PLPDMSHV
Sbjct: 110 DWNADEEILLLEGIEMYGLGNWAEVAEHVGTKTKAQCIDHYTTAYMNSPCYPLPDMSHVN 169
Query: 157 GKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGR------- 209
GKNRKELLAMAK + KK PG+ T K+ESPFSP RVK+E+ G +GR
Sbjct: 170 GKNRKELLAMAKVQGESKK--VLPGDLTPKDESPFSPPRVKVEDALGEGLAGRSPSHIAG 227
Query: 210 --------------GLNA----DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDP 251
G N D +RS KKP S ++GPSL ELSGYNSKR EFDP
Sbjct: 228 GANKKASNVGQFKDGANVAKVEDGHVDRSIGVKKPRYSADEGPSLTELSGYNSKRHEFDP 287
Query: 252 EYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFE 311
EYDNDAEQ LAEMEFK+ DSE +R++KLRVLRIY RLDERKRRK+FILERNLL+PNP E
Sbjct: 288 EYDNDAEQALAEMEFKETDSETDRELKLRVLRIYLSRLDERKRRKEFILERNLLFPNPLE 347
Query: 312 KDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEA 371
KDL+ E++E+ RY VFMRF SKE+HE L+++V+ E + +RIQ+L+E R+AGCRT AEA
Sbjct: 348 KDLTNEDKEVYHRYKVFMRFLSKEEHEALVRSVLEERKIRRRIQELQECRSAGCRTLAEA 407
Query: 372 DRYLELKRGREAEEASRRAKEGGHAGAS--------------SQGGANVFMASESLRKDS 417
++E KR +E E +++AKE G ++ S G + SL
Sbjct: 408 KIHIEQKRKKEHEVNAQKAKESGQLLSNTKVVHKTNRPMKIESDGNLDQKKGGASLDSTG 467
Query: 418 NSNSRPSGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSREIFS 477
+ + +G A + H +D I+GF +LLS +EK LCC+ RL P YL+MQEV+ +EIF
Sbjct: 468 RDSPKTTGHAGTKHWDDWDIVGFPGAELLSTSEKNLCCQNRLLPNHYLKMQEVLMQEIFK 527
Query: 478 GNVNNKADAHHLFKIEPSKIDRVYDMLVKK 507
G+V K DAH LFK++P+K+D VYDM+ KK
Sbjct: 528 GSVAKKEDAHVLFKVDPAKVDNVYDMVTKK 557
>sp|Q9SFD5|TAD2A_ARATH Transcriptional adapter ADA2a OS=Arabidopsis thaliana GN=ADA2A PE=1
SV=1
Length = 548
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/507 (48%), Positives = 332/507 (65%), Gaps = 26/507 (5%)
Query: 28 QGAGEGKRALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMD 87
+ E K LY CNYC+KD++G +R KCAVC DFDLC+ECFSVGVE++ HK++HPYRVMD
Sbjct: 41 EAGNERKPGLYCCNYCDKDLSGLVRFKCAVCMDFDLCVECFSVGVELNRHKNSHPYRVMD 100
Query: 88 NLSFPLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFF 147
NLSF L+ DWNAD+EILLLE I YG GNW E+A+HVG+KT CI+H+ + YM SP F
Sbjct: 101 NLSFSLVTSDWNADEEILLLEAIATYGFGNWKEVADHVGSKTTTECIKHFNSAYMQSPCF 160
Query: 148 PLPDMSHVVGKNRKELLAMAKGHIDDKKGPS---------KPGEATVKEESP-----FSP 193
PLPD+SH +GK++ ELLAM+K + P+ P A +K E+ P
Sbjct: 161 PLPDLSHTIGKSKDELLAMSKDSAVKTEIPAFVRLSPKEELPVSAEIKHEASGKVNEIDP 220
Query: 194 SRVKIEEMHKVG--PSGRGL----NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQ 247
+ + K G P + + A Q++RS KK G P + EL GYN KR+
Sbjct: 221 PLSALAGVKKKGNVPQAKDIIKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKRE 280
Query: 248 EFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYP 307
EF+ E+DNDAEQLLA+MEFKD+D++ ER+ KL+VLRIYSKRLDERKRRK+F+LERNLLYP
Sbjct: 281 EFEIEHDNDAEQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYP 340
Query: 308 NPFEKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRT 367
+ +E LS EER++ + VF RF SKE+H++L++ VI EH+ L+RI+DL+EAR AGCRT
Sbjct: 341 DQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRT 400
Query: 368 SAEADRYLELKRGREAEEAS----RRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRP 423
+++A+R++E KR +EAEE+ G AG + + + DS P
Sbjct: 401 TSDANRFIEEKRKKEAEESMLLRLNHGAPGSIAGKTLKSPRGLPRNLHPFGSDSLPKVTP 460
Query: 424 SGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSREIFSGNVNNK 483
S D + G LLSE EK++C E R+ P YL+M ++++REI G + K
Sbjct: 461 PRIYSGLDTWD--VDGLLGADLLSETEKKMCNETRILPVHYLKMLDILTREIKKGQIKKK 518
Query: 484 ADAHHLFKIEPSKIDRVYDMLVKKGLA 510
+DA+ FK+EPSK+DRVYDMLV KG+
Sbjct: 519 SDAYSFFKVEPSKVDRVYDMLVHKGIG 545
>sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ADA2 PE=1 SV=1
Length = 434
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 238/474 (50%), Gaps = 57/474 (12%)
Query: 38 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 97
+HC+ C+ D T ++R+ CA+CP++DLC+ CFS G H+ H YR+++ S+P++CPD
Sbjct: 5 FHCDVCSADCTNRVRVSCAICPEYDLCVPCFSQGSYTGKHRPYHDYRIIETNSYPILCPD 64
Query: 98 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVG 157
W AD+E+ L++G + GLGNW +IA+H+G++ KE EHY Y+ S ++P+PD++ +
Sbjct: 65 WGADEELQLIKGAQTLGLGNWQDIADHIGSRGKEEVKEHYLKYYLESKYYPIPDITQNIH 124
Query: 158 KNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQT 217
+ E L + I+ + E P P R
Sbjct: 125 VPQDEFLEQRRHRIESFR------------ERPLEPPR---------------------- 150
Query: 218 ERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDI 277
KP+ S PS E+ G+ R EF+ E++N+AE + +M F+ D + ++
Sbjct: 151 -------KPMAS---VPSCHEVQGFMPGRLEFETEFENEAEGPVKDMVFEPDDQPLDIEL 200
Query: 278 KLRVLRIYSKRLDERKRRKDFILERNLL---YPNPFEKDLSPEERELCRRYDVFMRFHSK 334
K +L IY+ RL R +K + E +L+ +K S E +EL R F R +
Sbjct: 201 KFAILDIYNSRLTTRAEKKRLLFENHLMDYRKLQAIDKKRSKEAKELYNRIKPFARVMTA 260
Query: 335 EDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGG 394
+D E+ + ++ E RIQ L+E R+ G T +Y K+ R S K G
Sbjct: 261 QDFEEFSKDILEELHCRARIQQLQEWRSNGLTTLEAGLKYERDKQAR----ISSFEKFGA 316
Query: 395 HAGASSQGGANVFMASESLRKD---SNSNSRPSGQASSSHVNDLYIMGFNETQLLSEAEK 451
AS G + + ++ + R + S + S G+ + ++D I + LLS E+
Sbjct: 317 STAASLSEGNSRYRSNSAHRSNAEYSQNYSENGGRKKNMTISD--IQHAPDYALLSNDEQ 374
Query: 452 RLCCEIRLAPPLYLRMQEVMSREIF-SGNVNNKADAHHLFKIEPSKIDRVYDML 504
+LC ++++ P YL ++EVM RE+ +G +K+ L I+P K +R+YD
Sbjct: 375 QLCIQLKILPKPYLVLKEVMFRELLKTGGNLSKSACRELLNIDPIKANRIYDFF 428
>sp|Q9P7J7|ADA2_SCHPO Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ada2 PE=1 SV=1
Length = 437
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 227/479 (47%), Gaps = 69/479 (14%)
Query: 38 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 97
YHCN C +DIT I I+C C DFDLCI CF+ G + H +HPYR+++ S+P+ +
Sbjct: 6 YHCNVCAQDITRSIHIRCVECVDFDLCIPCFTSGASLGTHHPSHPYRIIETNSYPIFDEN 65
Query: 98 WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFPLPDMSHVV 156
W AD+E+LL++ E GLGNWA+IA++VG +TKE C +HY Y+ S +PL +
Sbjct: 66 WGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTYIESDCYPLASV---- 121
Query: 157 GKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEM-HKVGPSGRGLNADP 215
+ GP V + + R +IE + L + P
Sbjct: 122 ----------------ELPGP-------VDRIAFAARKRARIEAFQPPPIIPQKPLASTP 158
Query: 216 QTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKD---ADSE 272
Q E+ GY R EFD EY N+AE + +M F D ++
Sbjct: 159 QCH-------------------EIQGYMPGRLEFDQEYMNEAELPIKDMNFDDDLHESAK 199
Query: 273 EERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFM 329
E +KL +L IY+ RL R RK I NLL EK +S EER L + F
Sbjct: 200 HEMQLKLTMLNIYNSRLTRRAVRKQTIFNHNLLDYRRLQANEKRMSKEERNLLNKTKAFA 259
Query: 330 RFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGR--EAEEAS 387
R + D++ + + + K+I DL+E R G T + +Y K + ++ ++
Sbjct: 260 RLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQGHKYERDKTQKFLLSKASA 319
Query: 388 RRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLYIMGFNETQLLS 447
K+ H + +Q + F + + + P+ ++S+ + QLLS
Sbjct: 320 SYDKQLRHVKSFNQTTSAPFQVRDIQKIVPRKPATPTMFSASA-----------DRQLLS 368
Query: 448 EAEKRLCCEIRLAPPLYLRMQ-EVMSREIFSGNVNNKADAHHLFK-IEPSKIDRVYDML 504
E E+ LC ++++ P +L ++ ++S + S K DA +LFK ++ +K+++VYD
Sbjct: 369 EDEQALCSKLQIFPKPFLALKFALISASLTSKKPFQKTDAVNLFKHLDANKVEQVYDFF 427
>sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3
Length = 443
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 204/465 (43%), Gaps = 64/465 (13%)
Query: 53 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 110
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 111 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 170
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQAE 135
Query: 171 IDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKPVTSG 230
+K + + S P R + + L+ D
Sbjct: 136 ------EAKTADTAIPFHSTDDPPRPTFDSL---------LSRD---------------- 164
Query: 231 NDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLD 290
++GY R +F E+DN AE L +++F + DS+ +K+ V+ IY RL
Sbjct: 165 --------MAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLK 216
Query: 291 ERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISE 347
ER+RRK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 217 ERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALE 276
Query: 348 HRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGGANVF 407
+ I+ L+E R AG A Y LK+ RE E R +
Sbjct: 277 FELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQW 336
Query: 408 MASESLRKDSNSNSRP----SGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPL 463
+ ++ S S P SG+ S+ +N + G T+ L+E EK LC +RL P
Sbjct: 337 LRRQADIDSGLSPSIPMASNSGRRSAPPLN---LTGLPGTEKLNEKEKELCQMVRLVPGA 393
Query: 464 YLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 508
YL + + E A A L KI+ +K ++YD L+++G
Sbjct: 394 YLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 438
>sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1
Length = 443
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 204/465 (43%), Gaps = 64/465 (13%)
Query: 53 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 110
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 111 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 170
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQAE 135
Query: 171 IDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKPVTSG 230
+K + + S P R + + L+ D
Sbjct: 136 ------EAKTADTAIPFHSADDPPRPTFDSL---------LSRD---------------- 164
Query: 231 NDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLD 290
++GY R +F E+DN AE L +++F + DS+ +K+ V+ IY RL
Sbjct: 165 --------MAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLK 216
Query: 291 ERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISE 347
ER+RRK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 217 ERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALE 276
Query: 348 HRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGGANVF 407
+ I+ L+E R AG A Y LK+ RE E R +
Sbjct: 277 FELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQW 336
Query: 408 MASESLRKDSNSNSRP----SGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPL 463
+ ++ S S P SG+ S+ +N + G T+ L+E EK LC +RL P
Sbjct: 337 LRRQADIDSGLSPSVPMTSNSGRRSAPPLN---LTGLPGTEKLNEKEKELCQMVRLVPGA 393
Query: 464 YLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 508
YL + + E A A L KI+ +K ++YD L+++G
Sbjct: 394 YLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 438
>sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2
SV=1
Length = 443
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 203/465 (43%), Gaps = 64/465 (13%)
Query: 53 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 110
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 111 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 170
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQAE 135
Query: 171 IDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKPVTSG 230
+K + + S P R + + L+ D
Sbjct: 136 ------AAKTADTAIPFHSADDPPRPAFDSL---------LSRD---------------- 164
Query: 231 NDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLD 290
++GY R +F E+DN AE L +++F + DS+ +K+ V+ IY RL
Sbjct: 165 --------MAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLK 216
Query: 291 ERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISE 347
ER+RRK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 217 ERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALE 276
Query: 348 HRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGGANVF 407
+ I+ L+E R AG A Y LK+ RE E R +
Sbjct: 277 FELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQW 336
Query: 408 MASESLRKDSNSNSRPSGQASSS----HVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPL 463
+ ++ D +S PS +S+ L + G T+ L+E EK LC +RL P
Sbjct: 337 LRRQA---DIDSGLSPSVLMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQVVRLVPGA 393
Query: 464 YLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 508
YL + + E A A L KI+ +K ++YD L+++G
Sbjct: 394 YLEYKSALLNECHKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 438
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 198/454 (43%), Gaps = 100/454 (22%)
Query: 39 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 97
+C YC D+T +R++C C D +LC +CFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLADVTS-LRLRCTECQDIELCTDCFSAGAEIGNHRRWHGYQLVDGGRFTLWGPEA 66
Query: 98 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFPLPDMS 153
W + +E LLL+ IE +G GNW ++A HVG ++T +EHY +Y++
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYIHG--------- 117
Query: 154 HVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNA 213
+ K I D P++ + T P SPS + P+ A
Sbjct: 118 -----------NLGKACIPDSI-PNRVTDHTCPTGGPLSPS------LTTPLPTLDLTVA 159
Query: 214 DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEE 273
D Q GY R +++ E+D +AE L++ + D +
Sbjct: 160 DQQQ----------------------LGYMPLRDDYEIEFDQEAETLISGLSVNYDDDDV 197
Query: 274 ERDIKLRVLRIYSKRLDERKRRKDFILERNLL----------YPNPFEKDLSPEERELCR 323
E ++K + +Y ++L ER+RRK + NL+ P ++ +S EE+EL
Sbjct: 198 EVELKEAYVDMYVRKLKERQRRKSLARDYNLVPAFLGKDKKEKEKPAKRKISKEEKELRL 257
Query: 324 RYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREA 383
+ +F S ++ ED + + E +I++L+ R G + E+ Y + RE
Sbjct: 258 KLRPLYQFMSNKEIEDCFENMHKERMLRAKIRELQRYRRNGITKTEESAEYEAARHKREK 317
Query: 384 EEASR---RAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLYIMGF 440
+ ++ +K G G S+ F A E+L GF
Sbjct: 318 RKENKNIANSKRGREDGKESE-----FAAIENL------------------------AGF 348
Query: 441 NETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSRE 474
+LLS+ EK LC + L+P YL ++ ++ ++
Sbjct: 349 ---ELLSDREKVLCSSLNLSPTRYLTVKTIIIKD 379
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 195/454 (42%), Gaps = 100/454 (22%)
Query: 39 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 97
+C YC +++ +R +C C D +LC ECFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLAEVS-PLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEA 66
Query: 98 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 151
W + +E LLL+ IE +G GNW ++A HVG ++T + +EHY ++Y++ +PD
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPD 126
Query: 152 MSHVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGL 211
NR H GP P T P P + + E ++
Sbjct: 127 TI----PNR------VTDHTCPSGGPLSPSLTT-----PLPPLDISVAEQQQL------- 164
Query: 212 NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADS 271
GY R +++ EYD DAE L++ + D
Sbjct: 165 -----------------------------GYMPLRDDYEIEYDQDAETLISGLSVNYDDD 195
Query: 272 EEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKD-----------LSPEERE 320
+ E ++K + +Y ++L ER+RRK+ + NL+ P KD ++ EE+E
Sbjct: 196 DVEIELKRAHVDMYVRKLKERQRRKNIARDYNLV-PAFLGKDKKEKEKALKRKITKEEKE 254
Query: 321 LCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRG 380
L + +F S ++ +DL + + E +I++L+ R G E+ Y +
Sbjct: 255 LRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHK 314
Query: 381 REAEEASRRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLYIMGF 440
RE + ++ G G + F A E+L GF
Sbjct: 315 REKRKENKNL--AGSKRGKEDGKDSEFAAIENL------------------------PGF 348
Query: 441 NETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSRE 474
+LLS+ EK LC + L+P Y+ ++ ++ ++
Sbjct: 349 ---ELLSDREKVLCSSLNLSPARYVTVKTIIIKD 379
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 195/454 (42%), Gaps = 100/454 (22%)
Query: 39 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 97
+C YC +++ +R +C C D +LC ECFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLAEVS-PLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEA 66
Query: 98 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 151
W + +E LLL+ IE +G GNW ++A HVG ++T + +EHY ++Y++ +PD
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPD 126
Query: 152 MSHVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGL 211
NR H GP P T P P + + E ++
Sbjct: 127 TI----PNR------VTDHTCPSGGPLSPSLTT-----PLPPLDISVAEQQQL------- 164
Query: 212 NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADS 271
GY R +++ EYD DAE L++ + D
Sbjct: 165 -----------------------------GYMPLRDDYEIEYDQDAETLISGLSVNYDDD 195
Query: 272 EEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKD-----------LSPEERE 320
+ E ++K + +Y ++L ER+RRK+ + NL+ P KD ++ EE+E
Sbjct: 196 DVEIELKRAHVDMYVRKLKERQRRKNIARDYNLV-PAFLGKDKKEKEKALKRKITKEEKE 254
Query: 321 LCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRG 380
L + +F S ++ +DL + + E +I++L+ R G E+ Y +
Sbjct: 255 LRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHK 314
Query: 381 REAEEASRRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLYIMGF 440
RE + ++ G G + F A E+L GF
Sbjct: 315 REKRKENKNL--AGSKRGKEDGKDSEFAAIENL------------------------PGF 348
Query: 441 NETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSRE 474
+LLS+ EK LC + L+P Y+ ++ ++ ++
Sbjct: 349 ---ELLSDREKVLCSSLNLSPARYVTVKTIIIKD 379
>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1
SV=1
Length = 555
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 57/347 (16%)
Query: 38 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLIC-- 95
Y+C C DI G IR+ CA C +FDLC++CF+ G E+ H++NH Y+ MD + L
Sbjct: 11 YNCTNCQDDIQG-IRVHCAECENFDLCLQCFAAGAEIGAHQNNHSYQFMDTGTSILSVFR 69
Query: 96 --PDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMS 153
W A +EI LL+ IE YG GNW +I++H+ TK+ E E Y N ++N
Sbjct: 70 GKGAWTAREEIRLLDAIEQYGFGNWEDISKHIETKSAEDAKEEYVNKFVNG--------- 120
Query: 154 HVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNA 213
+G+ + + D G G S P + +E ++
Sbjct: 121 -TIGRATWTPAQSQRPRLIDHTGDDDAGPLGTNALSTLPPLEINSDEAMQL--------- 170
Query: 214 DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEE 273
GY R F+ EYD AEQL++ + D+E
Sbjct: 171 ---------------------------GYMPNRDSFEREYDPTAEQLISNISLSSEDTEV 203
Query: 274 ERDIKLRVLRIYSKRLDERKRR----KDFILERNLLYPNPF--EKDLSPEERELCRRYDV 327
+ +KL + IY++RL ER RR +D+ L N + ++ L+ E+RE R+ V
Sbjct: 204 DVMLKLAHVDIYTRRLRERARRKRMVRDYQLVSNFFRNRNYAQQQGLTKEQREFRDRFRV 263
Query: 328 FMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRY 374
+ +F++ ++E LL ++ E R +L R G AE +
Sbjct: 264 YAQFYTCNEYERLLGSLEREKELRIRQSELYRYRYNGLTKIAECTHF 310
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 60/289 (20%)
Query: 39 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 97
+C C D+T +RI+CA C D +LC ECFS G E+ H+ H Y+ +D F L P+
Sbjct: 8 YCVNCLADVTN-LRIRCAECQDIELCPECFSAGAEIGNHRRWHGYQQVDGGRFSLWGPEA 66
Query: 98 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 151
W + +E LL+ IE YG GNW ++A HVG ++T + ++HY ++Y++ +PD
Sbjct: 67 EGGWTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYIHGNLGKACIPD 126
Query: 152 MSHVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGL 211
+ H GP P T P P + + E ++
Sbjct: 127 ----------SIPNRVTDHTCPSGGPLSPSLTT-----PLPPLDITVVEQQQL------- 164
Query: 212 NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADS 271
GY R +++ EYD +AE+L++ + D
Sbjct: 165 -----------------------------GYMPLRDDYEIEYDQEAEKLISGLSVNYDDE 195
Query: 272 EEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEERE 320
+ E ++K + +Y ++L ER+RRK+ + NL+ P +D +ERE
Sbjct: 196 DIEIEMKRAHVDMYVRKLRERQRRKNIARDYNLV-PAFLGRDKKDKERE 243
>sp|Q7KSD8|TAD2A_DROME Transcriptional adapter 2A OS=Drosophila melanogaster GN=Rpb4 PE=1
SV=1
Length = 562
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 202/509 (39%), Gaps = 91/509 (17%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVM-DNLSFPLICPDW 98
C C +T IKC+ C D LC++CFS G E H++NH Y ++ DN+ P W
Sbjct: 96 CATCRCSLTEPY-IKCSECLDTLLCLQCFSRGKEAFSHRNNHAYIIVRDNIQVFADEPHW 154
Query: 99 NADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCI-EHYTNVYMNSPFFPLPDMSHVVG 157
A DE +LL+ + +G GNW +++ + + + + HY + Y F L ++ H
Sbjct: 155 TARDERILLKTLRTHGYGNWEAVSQALDQRHEPAEVRRHYHDCYFGGIFERLLNLKHA-- 212
Query: 158 KNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQT 217
++ V E P+ + +M + P A Q
Sbjct: 213 -----------------------RDSYVPERMPY------VFKMRSLDPPRHDDIASMQF 243
Query: 218 ERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEM--------EFKDA 269
S +GY R +FD YD AE LL+ M + + +
Sbjct: 244 RLS-------------------AGYRCARGDFDTPYDTSAESLLSIMVDHRGRDDDNEAS 284
Query: 270 DSEEERDI----KLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEEREL---- 321
+SE ER++ +L ++R Y+ RL ER+RR + + L+ PN +S
Sbjct: 285 ESEFEREVTEELQLGLVRAYNNRLRERQRRYKIMRQHGLIMPNRTVSWISKYVHAFGSDA 344
Query: 322 -CRRYDVFMRFHSKEDHEDLLQTVISEHRTL-KRIQDLKEARAAGCRTSAEADRYLELKR 379
C R+ FM+ D+L + +R L ++ L + R G RT + A Y L +
Sbjct: 345 SCMRFLGFMQICPDPIKFDMLLESLRYYRELHSQLHKLYDLREHGVRTLSGAKLYARLSK 404
Query: 380 GR-EAEEASRRAK--------------EGGHAGASSQGGANVFMASESLRKDSNSNSRPS 424
R +A+ R K E +G N + + R+ ++
Sbjct: 405 ERQQAQRDYSRLKQTDAFDWQQLVQHYESNRSGDPGPLAINSKLYVMNTRRKASPIEIGG 464
Query: 425 GQ-----ASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSREIFSGN 479
G+ + + N I L + E++LC RL P YL + + E
Sbjct: 465 GKHFTHCLTPTEYNFSLIPDLPGYSKLDDGERKLCSVARLVPQSYLDYKNQLVTEQAKLG 524
Query: 480 VNNKADAHHLFKIEPSKIDRVYDMLVKKG 508
ADA L KI+ +K ++YD L++ G
Sbjct: 525 YLRLADARRLIKIDVNKTRQIYDFLLEHG 553
>sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1
Length = 443
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 40 CNYCNKDITGKIRIKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 97
C C+ +T IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P
Sbjct: 17 CRGCSSYLTEPY-IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPS 74
Query: 98 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFF 147
W A +E+ LLE + G GNW ++A + TKTKE C +HY ++N+P F
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLF 124
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 17/297 (5%)
Query: 226 PVTSGNDGP-----SLV--ELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIK 278
P S +D P SL+ +++GY R +F E+DN AE L +++F + DS+ +K
Sbjct: 145 PFHSADDPPRPAFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALK 204
Query: 279 LRVLRIYSKRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKE 335
+ V+ IY RL ER+RRK I + L+ F E+ E ++L F R
Sbjct: 205 MAVVDIYHSRLKERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPV 264
Query: 336 DHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGH 395
+H+ +++ E + I+ L+E R AG A Y LK+ RE E R
Sbjct: 265 EHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVL 324
Query: 396 AGASSQGGANVFMASESLRKDSNSNSRPSGQASSS----HVNDLYIMGFNETQLLSEAEK 451
++ ++ D +S PS +S+ L + G T+ L+E EK
Sbjct: 325 QYIQDSSACQQWLRRQA---DIDSGLSPSVLMASNSGRRSAPPLNLTGLPGTEKLNEKEK 381
Query: 452 RLCCEIRLAPPLYLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 508
LC +RL P YL + + E A A L KI+ +K ++YD L+++G
Sbjct: 382 ELCQVVRLVPGAYLEYKSALLNECHKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 438
>sp|Q5ZJF3|TAD2A_CHICK Transcriptional adapter 2-alpha OS=Gallus gallus GN=TADA2A PE=2
SV=1
Length = 446
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 40 CNYCNKDITGKIRIKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 97
C C+ +T +KCA C P F LC++CF+ G E H+S+H Y +M + FP++ P+
Sbjct: 17 CRGCSSYLTEPY-VKCAECGPPPFLLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPN 74
Query: 98 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFF 147
W A +E+ LLE + G GNW ++A + TK+KE C +HY ++N+P F
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKSKEECEKHYMKHFINNPLF 124
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 123/284 (43%), Gaps = 19/284 (6%)
Query: 238 ELSGYNSKRQEFDP-EYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLDERKR-- 294
+++GY R +DN AE L +++F + DS+ +K+ V+ IY R K
Sbjct: 164 DMAGYMPARARLSSRSFDNYAEWDLRDIDFVEDDSDILHALKIAVVDIYHSRFKREKTAG 223
Query: 295 RKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTL 351
RK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 224 RKKIIRDHGLINLRKFQILERRYPKEVQDLYETMRRFARILGPVEHDKFIESHALEFELR 283
Query: 352 KRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGGANVFMASE 411
+ I+ L+E RAAG A Y LK+ R+ E R +++ +
Sbjct: 284 REIKRLQEYRAAGITNFCSARTYDHLKKTRDEERLKRTMLSEVLQYIQDSSACQQWLSRQ 343
Query: 412 SLRKDSNSNSRP-------SGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPLY 464
+ D +S P SG+ S+ +N + G T+ L+E EK LC +RL P Y
Sbjct: 344 A---DIDSGPTPAAPIPSNSGRRSAPPLN---LTGLPGTEKLNEKEKELCQMVRLVPGAY 397
Query: 465 LRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 508
L + + E A A L KI+ +K ++YD L+++G
Sbjct: 398 LEYKAALVNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 441
>sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1
SV=3
Length = 985
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 32 EGKRALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 91
EG YHCN C+ D + K R C DFDLC ECF+ G S+ +M+
Sbjct: 302 EGPAVEYHCNSCSADCSRK-RYHCPKQADFDLCTECFNSGKFSSDMSSSDFI-LMEPAEA 359
Query: 92 PLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPD 151
P + D E LLL NW EIAEHV TKTK C+ H+ + + F D
Sbjct: 360 PGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQID 419
Query: 152 MSHVVGKNRKEL 163
+ K+ +L
Sbjct: 420 YKDPISKDTTDL 431
>sp|Q9XI07|SWI3C_ARATH SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1
SV=1
Length = 807
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 39 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF--PLICP 96
HCN+C++ + + + D LC +CF G V H RV D + F
Sbjct: 344 HCNHCSRPLP-TVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRV-DPMKFYGDQDGD 401
Query: 97 DWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHY 137
+W + +LLLE +E+Y NW +IA+HVG+K+K CI H+
Sbjct: 402 NWTDQETLLLLEAVELYN-ENWVQIADHVGSKSKAQCILHF 441
>sp|O14470|SSR2_SCHPO SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3
Length = 503
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 98 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPF 146
W+ + +LLLE IE YG +W +IA HVG++TKE C+ H+ + + P+
Sbjct: 250 WSNQETLLLLEAIETYG-DDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297
>sp|Q54J55|MYBX_DICDI Myb-like protein X OS=Dictyostelium discoideum GN=mybX PE=3 SV=1
Length = 1620
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 34 KRALYHCNYCNKD--------ITGKIRIKCAVCPDF----DLCIECFSVGVEVHPHKSNH 81
K+ L+ C C D + + + P++ +C+ CFS G + +S+
Sbjct: 857 KKPLFECKKCKADCSNVRYQLVNNSTALDGNILPEYFYPMIICVNCFSSGNYENFIQSSS 916
Query: 82 PYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNV 140
R+ + W + +LLLEGIE++ NW EI++++G +KT E C+ H+ +
Sbjct: 917 FQRIEQHQPEEF---GWTDIETLLLLEGIEIFR-DNWQEISDYIGGSKTPEQCLTHFIRL 972
Query: 141 YMNSPFFPLPDMSHVVGKNRKELLAMAKGHID 172
+ F S VG +++K ID
Sbjct: 973 PIEDEFLERKISSFPVG-------SLSKKEID 997
>sp|O13788|SSR1_SCHPO SWI/SNF and RSC complexes subunit ssr1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr1 PE=1 SV=1
Length = 527
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 39 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPL---IC 95
HC YC + + + +++CI C+ ++ P + D + I
Sbjct: 236 HC-YCCGNKFNESYYQSQTAQKYNVCISCY------QQNRFPSPTTIADYKEVAIQNKIE 288
Query: 96 PD--WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNV 140
D W A + +LL EG+EMY +WA++A HV TK+ E CI + N+
Sbjct: 289 DDDTWTAQELVLLSEGVEMYS-DDWAKVASHVNTKSVEECILKFLNL 334
>sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 PE=1
SV=2
Length = 1697
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSV-GVEVHPHK-SNHP 82
CN C+ DI +C VCPD+D+C CFS G HPHK +NHP
Sbjct: 1524 CNACHLDIETGQGWRCEVCPDYDVCNACFSRDGGVNHPHKLTNHP 1568
>sp|P43609|RSC8_YEAST Chromatin structure-remodeling complex protein RSC8
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC8 PE=1 SV=1
Length = 557
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 37 LYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICP 96
+Y C+ C + + +R D +LC CF G +S+ R+ +N + +
Sbjct: 257 VYICHTCGNE-SINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRLENNGNS--VKK 313
Query: 97 DWNADDEILLLEGIEMYGLGNWAEIAEHVGT-KTKELCIEHYTNV 140
+W+ + +LLLEGIEMY W +IA+HVG K E CIE + ++
Sbjct: 314 NWSDQEMLLLLEGIEMYE-DQWEKIADHVGGHKRVEDCIEKFLSL 357
>sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12 OS=Arabidopsis thaliana GN=HAC12 PE=2
SV=2
Length = 1706
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSV-GVEVHPHK-SNHP 82
CN C+ DI + +C VCPD+D+C C+ G HPHK + HP
Sbjct: 1533 CNVCHLDIESGLGWRCEVCPDYDVCNACYKKEGCINHPHKLTTHP 1577
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 98 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYM 142
W ++ I L GI+++G G W EIA+ VGT+T H Y+
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQFVGTRTPTQIQSHAQKYYL 423
>sp|Q84JG2|SWI3B_ARATH SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1
SV=1
Length = 469
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 33/145 (22%)
Query: 25 QPGQGAGEG---------KRALYHCNYCNKDITGKIRIKCAVCPDFDL--CIECFSVGVE 73
+ G+ AG+ + A +CN C I C C +DL C C+
Sbjct: 151 EAGKSAGDAASEPATTVKETAKRNCNGCK----AICSIACFACDKYDLTLCARCYV---- 202
Query: 74 VHPHKSNHPYRVMDNLS-FPLI------CPDWNADDEILLLEGIEMYGLGNWAEIAEHVG 126
+SN YRV N S F + P+W+ + +LLLE + YG +W ++A HV
Sbjct: 203 ----RSN--YRVGINSSEFKRVEISEESKPEWSDKEILLLLEAVMHYG-DDWKKVASHVI 255
Query: 127 TKTKELCIEHYTNVYMNSPFFPLPD 151
+T++ C+ + + F D
Sbjct: 256 GRTEKDCVSQFVKLPFGEQFVKESD 280
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2
SV=1
Length = 381
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 93
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 93
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 93
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q5RBA5|SQSTM_PONAB Sequestosome-1 OS=Pongo abelii GN=SQSTM1 PE=2 SV=1
Length = 440
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 15/67 (22%)
Query: 30 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRV 85
A E R + H C+ CN + G R KC+VCPD+DLC C G+ +R
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL----------HRG 162
Query: 86 MDNLSFP 92
L+FP
Sbjct: 163 HTKLAFP 169
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 93
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q64337|SQSTM_MOUSE Sequestosome-1 OS=Mus musculus GN=Sqstm1 PE=1 SV=1
Length = 442
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 30 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGV 72
A E R + H C+ CN + G R KC+VCPD+DLC C G+
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL 159
>sp|Q13501|SQSTM_HUMAN Sequestosome-1 OS=Homo sapiens GN=SQSTM1 PE=1 SV=1
Length = 440
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 15/67 (22%)
Query: 30 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRV 85
A E R + H C+ CN + G R KC+VCPD+DLC C G+ +R
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL----------HRG 162
Query: 86 MDNLSFP 92
L+FP
Sbjct: 163 HTKLAFP 169
>sp|Q8BP86|SNPC4_MOUSE snRNA-activating protein complex subunit 4 OS=Mus musculus
GN=Snapc4 PE=2 SV=2
Length = 1333
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 84 RVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHY 137
R + L F L WNA +E L++ IE YG+G+WA IA + ++ C+ +
Sbjct: 442 RYIRRLHFSLKKGRWNAKEEQQLIQLIEKYGVGHWARIASELPHRSGSQCLSKW 495
>sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B OS=Drosophila melanogaster GN=Dys PE=1 SV=3
Length = 1669
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 82
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 1284 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 1326
>sp|Q9LE42|HAC5_ARATH Histone acetyltransferase HAC5 OS=Arabidopsis thaliana GN=HAC5 PE=2
SV=1
Length = 1670
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPH 77
C C +++ +C VCPD+D+C C+S G+ HPH
Sbjct: 1504 CAICQQELETAQGWRCEVCPDYDVCNACYSKGIN-HPH 1540
>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophila melanogaster GN=Dys PE=1
SV=3
Length = 3598
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 82
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 3112 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 3154
>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1854
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 82
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 1469 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 1511
>sp|B2RWS6|EP300_MOUSE Histone acetyltransferase p300 OS=Mus musculus GN=Ep300 PE=1 SV=1
Length = 2415
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 35 RALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHK 78
R +Y CN C + + R C VC D+DLCI C++ + H HK
Sbjct: 1664 RFVYTCNECKHHV--ETRWHCTVCEDYDLCITCYN--TKNHDHK 1703
>sp|O08623|SQSTM_RAT Sequestosome-1 OS=Rattus norvegicus GN=Sqstm1 PE=1 SV=1
Length = 439
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 35 RALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGV 72
R++ H C+ CN + G R KC+VCPD+DLC C G+
Sbjct: 116 RSMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL 156
>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2
Length = 2414
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 35 RALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHK 78
R +Y CN C + + R C VC D+DLCI C++ + H HK
Sbjct: 1665 RFVYTCNECKHHV--ETRWHCTVCEDYDLCITCYN--TKNHDHK 1704
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2
SV=1
Length = 383
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVM 86
C+ C K R KC +C D+DLC C+ G H + HP + +
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCI 55
>sp|Q9TW65|DMD_CAEEL Dystrophin-1 OS=Caenorhabditis elegans GN=dys-1 PE=1 SV=2
Length = 3674
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 16 PVTIQILQLQPGQGAGEGKRALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVH 75
P +I L + E + CN C IR +C C + DLC CF
Sbjct: 3282 PQSIVWLAVMHRLVISESTKHASKCNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAK 3341
Query: 76 PHKSNHPYR 84
H++NHP +
Sbjct: 3342 SHRTNHPMQ 3350
>sp|Q7YU29|DMDE_DROME Dystrophin, isoform E OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1051
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 82
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 666 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 708
>sp|Q5SSH7|ZZEF1_MOUSE Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Mus
musculus GN=Zzef1 PE=1 SV=2
Length = 2924
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 38 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNH 81
+ C++C I G+ R+ C VC DFDLC C++ + H H
Sbjct: 1828 FTCDHCQGLIIGR-RMNCNVCDDFDLCYGCYTAKKYSYGHLPTH 1870
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 91
C+ C+ +I R +C C D DLC CF GV+ H +H M N+ F
Sbjct: 1781 CDGCD-EIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHE---MVNMEF 1828
>sp|O43149|ZZEF1_HUMAN Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Homo
sapiens GN=ZZEF1 PE=1 SV=6
Length = 2961
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 38 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNH 81
+ C++C I G+ R+ C VC DFDLC C++ + H H
Sbjct: 1830 FTCDHCQGLIIGR-RMNCNVCDDFDLCYGCYAAKKYSYGHLPTH 1872
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 40 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 91
C+ C+ +I R +C C D DLC CF GV+ H +H M N+ F
Sbjct: 1783 CDGCD-EIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHE---MVNMEF 1830
>sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG OS=Arabidopsis thaliana GN=BIG PE=1 SV=2
Length = 5098
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 38 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVH----PHKSNHP 82
Y C+ C+ + R C VCPDFDLC C+ V ++ PH +HP
Sbjct: 2616 YCCDGCSTVPILRRRWHCTVCPDFDLCEACYEV-LDADRLPPPHTRDHP 2663
>sp|Q54QG5|Y3893_DICDI Probable E3 ubiquitin-protein ligase DDB_G0283893 OS=Dictyostelium
discoideum GN=DDB_G0283893 PE=3 SV=2
Length = 5875
Score = 39.7 bits (91), Expect = 0.057, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 37 LYHCNYCNKD-ITGKIRIKCAVCPDFDLCIECFSVGVEVHP 76
L+ C+ CN + ITGK R C+ C DFDLC +C+ + HP
Sbjct: 3228 LFSCDLCNINPITGK-RWNCSNCGDFDLCNQCYQNPEKDHP 3267
>sp|A2CJ06|DYTN_HUMAN Dystrotelin OS=Homo sapiens GN=DYTN PE=2 SV=1
Length = 578
Score = 39.3 bits (90), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 40 CNYCNK-DITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 82
C C ITG +R +C C +FD+C CF G+ H+ +HP
Sbjct: 228 CTLCRTFPITG-LRYRCLKCLNFDICQMCFLSGLHSKSHQKSHP 270
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 38.9 bits (89), Expect = 0.098, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 35 RALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHK 78
R +Y CN C + + R C VC D+DLCI C++ + H HK
Sbjct: 1702 RFVYTCNECKHHV--ETRWHCTVCEDYDLCINCYN--TKSHAHK 1741
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,494,963
Number of Sequences: 539616
Number of extensions: 8966325
Number of successful extensions: 30376
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 30076
Number of HSP's gapped (non-prelim): 409
length of query: 512
length of database: 191,569,459
effective HSP length: 122
effective length of query: 390
effective length of database: 125,736,307
effective search space: 49037159730
effective search space used: 49037159730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)