BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010342
(512 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSK8|PP240_ARATH Pentatricopeptide repeat-containing protein At3g18020
OS=Arabidopsis thaliana GN=At3g18020 PE=2 SV=1
Length = 688
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/501 (63%), Positives = 393/501 (78%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
M+QLC + RV +AHKL FDM++RGH+P+VV++TTLI GYC E++VA+KVFDEMR CG+
Sbjct: 169 MNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGI 228
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PNSLT SVL+ G L+ RDVE LM +LWE MK E D S+ AAFANLVDS+CREGY
Sbjct: 229 RPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYF 288
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
N++F IAE+M +SVN EFA GHMIDSLCR RNHGA+R+VY+M+ +GL P SYN+I
Sbjct: 289 NDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAI 348
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+HGLCK GGCMRAYQLLEEG +F + PSE+TYK+L+E LC E D KAR VL+ ML K+
Sbjct: 349 IHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEG 408
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
DRTRI NIYLR LC++ NPTE+LNVLV MLQ C+PD TLNTVING CKMGR+++A+K
Sbjct: 409 ADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMK 468
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
VL+DM+ GKFCAPDAVT T++ GLL GR +EAL++L +VMP+ PG+V YNAV+RG
Sbjct: 469 VLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRG 528
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
LF+L + +EA VF + V ADSTTYAI+IDGLC +N++D AK+FWDD++WPS HD
Sbjct: 529 LFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHD 588
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
+VYAA +KGLC+SG + +A HFLY+L DSG PN+VCYN VI + +KREAYQIL
Sbjct: 589 AFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILE 648
Query: 481 EMRKNGLNPDAVTWRILDKLH 501
EMRKNG PDAVTWRILDKLH
Sbjct: 649 EMRKNGQAPDAVTWRILDKLH 669
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 220/507 (43%), Gaps = 21/507 (4%)
Query: 3 QLCGLSR-VGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVL 61
+C + R EA ++ + RG+ P+ ++ +++IH C G D A++ F G +
Sbjct: 63 SICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFI 122
Query: 62 PNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVN 121
P+ T +V++ +L +R ++ +L K+E S+ N + L++ LC V
Sbjct: 123 PDERTCNVIIARLLYSRSPVSTLGVIHRLIG-FKKEFVPSLTN--YNRLMNQLCTIYRVI 179
Query: 122 EVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIV 181
+ ++ DM + + +I C A +V MR G+ P+ ++ + ++
Sbjct: 180 DAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Query: 182 HGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKV-----LVEGLCGESDLEKARKVLQFML 236
G K +L++E ++ ++ + K LV+ +C E ++ + M
Sbjct: 240 GGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMS 299
Query: 237 SKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIE 296
+ V+ + +LC + ++ M +P + N +I+G CK G
Sbjct: 300 LCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCM 359
Query: 297 EALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNA 356
A ++L + +F P T+ ++ L +A N+L ++ + G + YN
Sbjct: 360 RAYQLLEEGSEFEF-FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRI-YNI 417
Query: 357 VLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVW-- 414
LRGL + E V ML D T VI+GLC+ ++D+A + DD++
Sbjct: 418 YLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGK 477
Query: 415 ---PSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELV-DSGVTPNIVCYNVVIDGACKLS 470
P + N V GL G+ EA+ L ++ ++ + P +V YN VI G KL
Sbjct: 478 FCAPDAVTLNTVMC----GLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLH 533
Query: 471 MKREAYQILREMRKNGLNPDAVTWRIL 497
EA + ++ K + D+ T+ I+
Sbjct: 534 KGDEAMSVFGQLEKASVTADSTTYAII 560
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 250/503 (49%), Gaps = 42/503 (8%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C S++ A L M G+ P++V+ ++L++GYC + A + D+M G P+
Sbjct: 55 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 114
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
++T++ L+ G+ A L+ ++ +R + N + +V+ LC+ G ++
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-----NLVTYGVVVNGLCKRGDIDLA 169
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
F + M K + +IDSLC+ A + M +G+ P++V+Y+S++
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC +G A QLL + I+ P+ T+ L++ E +A K+ M+ K+ +D
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI-KRSID- 287
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
PD+ T N++INGFC R+++A ++
Sbjct: 288 ---------------------------------PDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
MV+ K C PD T+ T+I G R+++ L ++ M RG VTY +++GLF
Sbjct: 315 FMVS-KDCFPDLDTYNTLIKGFCKSKRVEDGTEL-FREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+ A++VF M+ GV D TY+I++DGLC + +L++A +D + D Y+
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y MI+G+C++GK+ + L GV PN+V YN +I G C + +EAY +L++M+
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 484 KNGLNPDAVTWRILDKLHGNRGN 506
++G PD+ T+ L + H G+
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGD 515
Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 242/504 (48%), Gaps = 49/504 (9%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C R+ +A L M G+ P+ +++TTLIHG + A + D M G PN
Sbjct: 91 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
+TY V+V G+ + D++ A L+ K+ E K E D+ + F ++DSLC+ +V++
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVI----FNTIIDSLCKYRHVDDAL 205
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+ ++M +I LC GR AS+++ M ++ + P+LV++N+++
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
K G + A +L ++ I+ P TY L+ G C L+KA+++ +FM+SK
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK------ 319
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
C PD+ T NT+I GFCK R+E+ ++ +
Sbjct: 320 -----------------------------DCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M + + D VT+TT+I GL + G A + Q M G P I+TY+ +L GL
Sbjct: 351 M-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNN 408
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS--NIHDNY 422
++E+A EVF+ M + D Y +I+G+C++ ++D+ WD S + N
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG---WDLFCSLSLKGVKPNV 465
Query: 423 V-YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILRE 481
V Y MI GLC + EA L ++ + G P+ YN +I + K + +++RE
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 482 MRKNGLNPDAVTWRIL-DKLHGNR 504
MR DA T ++ + LH R
Sbjct: 526 MRSCRFVGDASTIGLVANMLHDGR 549
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 185/407 (45%), Gaps = 10/407 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + A L M++ +VV + T+I C+ +D A +F EM G+ PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TYS L+ + A+ L+ + E+ ++ N F L+D+ +EG E
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEK-----KINPNLVTFNALIDAFVKEGKFVEA 274
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
++ +DM + + F +I+ C R A ++ M + P L +YN+++ G
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
CK +L E G + TY L++GL + D + A+KV + M+S
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
+I L LC + L V +M +++ + D+ T+I G CK G++++ +
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+ + K P+ VT+ T+I GL + +QEA LL + M + G P TYN ++R R
Sbjct: 455 SL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK-MKEDGPLPDSGTYNTLIRAHLR 512
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
+ E+ M V D++T +V + L +LD K F D
Sbjct: 513 DGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLD--KSFLD 556
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ +C +V + LF + +G PNVV+Y T+I G C + AY + +M+ G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 61 LPNSLTYSVLVRGVLRTRD 79
LP+S TY+ L+R LR D
Sbjct: 497 LPDSGTYNTLIRAHLRDGD 515
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC ++ +A ++F M+ ++ YTT+I G C+ G++D + +F + GV
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREG 118
PN +TY+ ++ G+ R ++ A + L ++MKE+ L ++ + L+ + R+G
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEA----YALLKKMKEDGPLP-DSGTYNTLIRAHLRDG 514
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 228 bits (581), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 249/503 (49%), Gaps = 42/503 (8%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C S++ A L M G+ P++V+ ++L++GYC + A + D+M G P+
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
++T++ L+ G+ A L+ ++ +R + N + +V+ LC+ G +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-----NLVTYGVVVNGLCKRGDTDLA 244
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ M K + +IDSLC+ A + M +G+ P++V+Y+S++
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC +G A QLL + I+ P+ T+ L++ E +A K+ M+ K+ +D
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI-KRSID- 362
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
PD+ T N+++NGFC R+++A ++
Sbjct: 363 ---------------------------------PDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
MV+ K C PD VT+ T+I G R+++ L ++ M RG VTY +++GLF
Sbjct: 390 FMVS-KDCFPDVVTYNTLIKGFCKSKRVEDGTEL-FREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+ A++VF M+ GV D TY+I++DGLC + +L++A +D + D Y+
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y MI+G+C++GK+ + L GV PN+V YN +I G C + +EAY +L++M+
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 484 KNGLNPDAVTWRILDKLHGNRGN 506
++G P++ T+ L + H G+
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGD 590
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 242/504 (48%), Gaps = 49/504 (9%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C R+ +A L M G+ P+ +++TTLIHG + A + D M G PN
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
+TY V+V G+ + D + A L+ K+ E K E D+ + F ++DSLC+ +V++
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVI----FNTIIDSLCKYRHVDDAL 280
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+ ++M +I LC GR AS+++ M ++ + P+LV++N+++
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
K G + A +L ++ I+ P TY LV G C L+KA+++ +FM+SK
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK------ 394
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
C PDV+T NT+I GFCK R+E+ ++ +
Sbjct: 395 -----------------------------DCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M + + D VT+TT+I GL + G A + Q M G P I+TY+ +L GL
Sbjct: 426 M-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ-MVSDGVPPDIMTYSILLDGLCNN 483
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS--NIHDNY 422
++E+A EVF+ M + D Y +I+G+C++ ++D+ WD S + N
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG---WDLFCSLSLKGVKPNV 540
Query: 423 V-YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILRE 481
V Y MI GLC + EA L ++ + G PN YN +I + K + +++RE
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 482 MRKNGLNPDAVTWRIL-DKLHGNR 504
MR DA T ++ + LH R
Sbjct: 601 MRSCRFVGDASTIGLVANMLHDGR 624
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 185/407 (45%), Gaps = 10/407 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC A L M++ +VV + T+I C+ +D A +F EM G+ PN
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TYS L+ + A+ L+ + E+ ++ N F L+D+ +EG E
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEK-----KINPNLVTFNALIDAFVKEGKFVEA 349
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
++ +DM + + F +++ C R A ++ M + P +V+YN+++ G
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
CK +L E G + TY L++GL + D + A+KV + M+S
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
+I L LC + L V +M +++ + D+ T+I G CK G++++ +
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+ + K P+ VT+ T+I GL + +QEA LL + M + G P TYN ++R R
Sbjct: 530 SL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK-MKEDGPLPNSGTYNTLIRAHLR 587
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
+ E+ M V D++T +V + L +LD K F D
Sbjct: 588 DGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLD--KSFLD 631
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ +C +V + LF + +G PNVV+Y T+I G C + AY + +M+ G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 61 LPNSLTYSVLVRGVLRTRD 79
LPNS TY+ L+R LR D
Sbjct: 572 LPNSGTYNTLIRAHLRDGD 590
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC ++ +A ++F M+ ++ YTT+I G C+ G++D + +F + GV
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +TY+ ++ G+ R ++ A + L ++MKE+ L N+ + L+ + R+G
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEA----YALLKKMKEDGPLP-NSGTYNTLIRAHLRDGDK 591
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGR 154
+ +M + V + G ++ ++ GR
Sbjct: 592 AASAELIREMRSCRFVGDASTIG-LVANMLHDGR 624
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 258/499 (51%), Gaps = 12/499 (2%)
Query: 3 QLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLP 62
Q+ + E K +M G+VP+++ TTLI G+CR G+ A K+ + + G +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 63 NSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNE 122
+ +TY+V++ G + ++ A + +RM D+ + ++ SLC G + +
Sbjct: 171 DVITYNVMISGYCKAGEINNA----LSVLDRMSVSPDV----VTYNTILRSLCDSGKLKQ 222
Query: 123 VFRIAEDMPQGKSVNEEFACGHMIDSLCR-SGRNHGASRVVYVMRKRGLTPSLVSYNSIV 181
+ + M Q + +I++ CR SG H A +++ MR RG TP +V+YN +V
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH-AMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 182 HGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDV 241
+G+CK G A + L + G P+ T+ +++ +C A K+L ML K
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 242 DRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKV 301
NI + LC +++L M Q CQP+ ++ N +++GFCK +++ A++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 302 LNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGL 361
L MV+ + C PD VT+ T++ L G++++A+ +L Q + +G SP ++TYN V+ GL
Sbjct: 402 LERMVS-RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ-LSSKGCSPVLITYNTVIDGL 459
Query: 362 FRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDN 421
+ + +A ++ + M + D+ TY+ ++ GL ++DEA +F+ + +
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 422 YVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILRE 481
+ +++ GLC+S + A+ FL +++ G PN Y ++I+G M +EA ++L E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 482 MRKNGLNPDAVTWRILDKL 500
+ GL + ++ K+
Sbjct: 580 LCNKGLMKKSSAEQVAGKM 598
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 201/401 (50%), Gaps = 12/401 (2%)
Query: 104 NAAFA-------NLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNH 156
N++FA N + + R G + E F+ E+M +V + C +I CR G+
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 157 GASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLV 216
A++++ ++ G P +++YN ++ G CK G A +L+ + P TY ++
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTIL 211
Query: 217 EGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQ 276
LC L++A +VL ML + I + A C + +L M C
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 277 PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALN 336
PDV+T N ++NG CK GR++EA+K LNDM + C P+ +T I+ + + GR +A
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 337 LLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGL 396
LL ++ ++G+SP +VT+N ++ L R + A ++ M G +S +Y ++ G
Sbjct: 331 LLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 397 CESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNI 456
C+ ++D A + + +V D Y M+ LC+ GK+ +AV L +L G +P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 457 VCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
+ YN VIDG K +A ++L EMR L PD +T+ L
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 174/392 (44%), Gaps = 42/392 (10%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ C S VG A KL +M+ RG P+VV+Y L++G C+ G +D A K ++M G
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +T+++++R + T A L+ + + S + F L++ LCR+G +
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-----GFSPSVVTFNILINFLCRKGLL 360
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
I E MPQ G P+ +SYN +
Sbjct: 361 GRAIDILEKMPQ-----------------------------------HGCQPNSLSYNPL 385
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+HG CK RA + LE + G P TY ++ LC + +E A ++L + SK
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
N + L + + +L M +PD IT ++++ G + G+++EA+K
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
++ P+AVTF +I+ GL + A++ L M RG P +Y ++ G
Sbjct: 506 FFHEFERMGI-RPNAVTFNSIMLGLCKSRQTDRAIDFLV-FMINRGCKPNETSYTILIEG 563
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 392
L +EA E+ N + G++ S+ +
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKKSSAEQVA 595
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 250/494 (50%), Gaps = 42/494 (8%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C S++ A + M G+ P++V+ ++L++GYC + + A + D+M G P+
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ T++ L+ G+ A L+ ++ +R + DL + +V+ LC+ G ++
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDL----VTYGTVVNGLCKRGDIDLA 242
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ + M +GK + +ID LC+ A + M +G+ P + +Y+S++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC +G A +LL + I+ P+ T+ L++ E L +A K+ M+ K+ +D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSID- 360
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
PD+ T +++INGFC R++EA K +
Sbjct: 361 ---------------------------------PDIFTYSSLINGFCMHDRLDEA-KHMF 386
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+++ K C P+ VT++T+I G R++E + L ++ M QRG VTY ++ G F+
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL-FREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
R + A+ VF M+ +GV + TY I++DGLC++ +L +A ++ + + D Y
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y MI+G+C++GK+ + L GV+PN++ YN +I G C+ K EA +L++M+
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 484 KNGLNPDAVTWRIL 497
++G P++ T+ L
Sbjct: 566 EDGPLPNSGTYNTL 579
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 240/501 (47%), Gaps = 43/501 (8%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C R+ +A L M G+ P+ ++TTLIHG + A + D+M G P+
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
+TY +V G+ + D++ A L+ K+ E+ K E D+ + N ++D LC+ ++++
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNT----IIDGLCKYKHMDDAL 278
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+ +M + F +I LC GR ASR++ M +R + P++V++++++
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
K G + A +L +E I+ P TY L+ G C L++A+ + + M+SK
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK------ 392
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
C P+V+T +T+I GFCK R+EE +++ +
Sbjct: 393 -----------------------------DCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M + + + VT+TT+I G A ++++ M G P I+TYN +L GL +
Sbjct: 424 M-SQRGLVGNTVTYTTLIHGFFQARDCDNA-QMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVY 424
++ +A VF + + D TY I+I+G+C++ ++++ + ++ + Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 425 AAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRK 484
MI G CR G EA L ++ + G PN YN +I + + + ++++EMR
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 485 NGLNPDAVTWRIL-DKLHGNR 504
G DA T ++ + LH R
Sbjct: 602 CGFAGDASTIGLVTNMLHDGR 622
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 229/496 (46%), Gaps = 42/496 (8%)
Query: 2 DQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVL 61
++L + +V +A LF DM P++V + L+ + + ++ + ++M+ G+
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 62 PNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVN 121
+ TYS+ + R LS+ A A ++ + GY
Sbjct: 116 HDLYTYSIFINCFCR--------------------RSQLSLALAVLAKMM----KLGYEP 151
Query: 122 EVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIV 181
++ ++ +++ C S R A +V M + G P ++ +++
Sbjct: 152 DIVTLSS----------------LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 182 HGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDV 241
HGL H A L+++ +Q G P TY +V GLC D++ A +L+ M K
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 242 DRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKV 301
I N + LC K+ + LN+ M +PDV T +++I+ C GR +A ++
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 302 LNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGL 361
L+DM+ K P+ VTF+ +I + G++ EA LY M +R P I TY++++ G
Sbjct: 316 LSDMIERKI-NPNVVTFSALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 362 FRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDN 421
R++EAK +F M+ + TY+ +I G C++ +++E + ++ + +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 422 YVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILRE 481
Y +I G ++ A ++V GV PNI+ YN+++DG CK +A +
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 482 MRKNGLNPDAVTWRIL 497
++++ + PD T+ I+
Sbjct: 494 LQRSTMEPDIYTYNIM 509
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 190/407 (46%), Gaps = 10/407 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + A L M+ +VV Y T+I G C+ MD A +F EM + G+ P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
TYS L+ + A+ L+ + ER ++ N F+ L+D+ +EG + E
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIER-----KINPNVVTFSALIDAFVKEGKLVEA 347
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
++ ++M + + F +I+ C R A + +M + P++V+Y++++ G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
CK +L E Q G + + TY L+ G D + A+ V + M+S
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
NI L LC + + V ++ ++ +PD+ T N +I G CK G++E+ ++
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
++ + K +P+ + + T+I G G +EA +LL + M + G P TYN ++R R
Sbjct: 528 NL-SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK-MKEDGPLPNSGTYNTLIRARLR 585
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
E + E+ M G D++T +V + L +LD K F D
Sbjct: 586 DGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLD--KSFLD 629
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ +C +V + +LF ++ +G PNV++Y T+I G+CR G + A + +M+ G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLS-VNNAAFANLVDSLCREGY 119
LPNS TY+ L+R LR D E + E +KE +A+ LV ++ +G
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASA-------ELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Query: 120 VNEVF 124
+++ F
Sbjct: 623 LDKSF 627
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC ++ +A +F ++ P++ +Y +I G C+ G+++ +++F + GV
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREG 118
PN + Y+ ++ G R E A+ L+ ++MKE+ L N+ + L+ + R+G
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLL----KKMKEDGPLP-NSGTYNTLIRARLRDG 587
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 250/494 (50%), Gaps = 42/494 (8%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C S++ A + M G+ P++V+ ++L++GYC + A + D+M PN
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
++T++ L+ G+ A L+ ++ R + + + + +V+ LC+ G ++
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT-----YGTVVNGLCKRGDIDLA 239
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ + M +GK + +ID+LC + A + M +G+ P++V+YNS++
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC +G A +LL + I+ P+ T+ L++ E L +A K+ M+ K+ +D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSID- 357
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
PD+ T +++INGFC R++EA K +
Sbjct: 358 ---------------------------------PDIFTYSSLINGFCMHDRLDEA-KHMF 383
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+++ K C P+ VT+ T+I G R++E + L ++ M QRG VTYN +++GLF+
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL-FREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+ A+++F M+ GV D TY+I++DGLC+ +L++A ++ + D Y
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y MI+G+C++GK+ + L GV PN++ Y +I G C+ +K EA + REM+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 484 KNGLNPDAVTWRIL 497
++G P++ T+ L
Sbjct: 563 EDGTLPNSGTYNTL 576
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 234/501 (46%), Gaps = 43/501 (8%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C R+ EA L M + PN V++ TLIHG + A + D M G P+
Sbjct: 161 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
TY +V G+ + D++ A L+ K+ E+ K E D+ + + ++D+LC VN+
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVI----YTTIIDALCNYKNVNDAL 275
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+ +M +I LC GR ASR++ M +R + P++V++++++
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
K G + A +L +E I+ P TY L+ G C L++A+ + + M+SK
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK------ 389
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
C P+V+T NT+I GFCK R+EE +++ +
Sbjct: 390 -----------------------------DCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M + + + VT+ T+I GL G A +++ M G P I+TY+ +L GL +
Sbjct: 421 M-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQK-IFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVY 424
++E+A VF + + D TY I+I+G+C++ ++++ + + + +Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 425 AAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRK 484
MI G CR G EA E+ + G PN YN +I + K + ++++EMR
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 485 NGLNPDAVTWR-ILDKLHGNR 504
G DA T +++ LH R
Sbjct: 599 CGFVGDASTISMVINMLHDGR 619
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 219/454 (48%), Gaps = 7/454 (1%)
Query: 44 EMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVN 103
++D A +F EM LP+ + ++ L+ + + + L+ L ERM+ +S +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD----LVISLGERMQNLR-ISYD 114
Query: 104 NAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY 163
++ L++ CR + + M + + +++ C R A +V
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 164 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 223
M P+ V++N+++HGL H A L++ + G P TY +V GLC
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 224 DLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLN 283
D++ A +L+ M K I + ALC KN + LN+ M +P+V+T N
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 284 TVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMP 343
++I C GR +A ++L+DM+ K P+ VTF+ +I + G++ EA LY M
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEA-EKLYDEMI 352
Query: 344 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 403
+R P I TY++++ G R++EAK +F M+ + TY +I G C++ +++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 404 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 463
E + ++ + + Y +I+GL ++G A ++V GV P+I+ Y++++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 464 DGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
DG CK +A + ++K+ + PD T+ I+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 193/404 (47%), Gaps = 11/404 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + A L M+ +VV YTT+I C ++ A +F EM + G+ PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TY+ L+R + A+ L+ + ER ++ N F+ L+D+ +EG + E
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIER-----KINPNVVTFSALIDAFVKEGKLVEA 344
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
++ ++M + + F +I+ C R A + +M + P++V+YN+++ G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
CK +L E Q G + + TY L++GL D + A+K+ + M+S
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
+I L LC + L V ++ +++ +PD+ T N +I G CK G++E+ +
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+ + K P+ + +TT+I G G +EA + L++ M + G P TYN ++R R
Sbjct: 525 SL-SLKGVKPNVIIYTTMISGFCRKGLKEEA-DALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVI----DGLCESNQLD 403
+ E+ M G V D++T ++VI DG E + L+
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 2/236 (0%)
Query: 270 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 329
M+Q++ P ++ N +++ KM + + + L + + + D ++ +I
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 330 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 389
++ AL +L ++M + GY P IVT +++L G +R+ EA + + M + ++ T+
Sbjct: 130 QLPLALAVLGKMM-KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 188
Query: 390 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 449
+I GL N+ EA D +V D + Y ++ GLC+ G I A+ L ++
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 450 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 505
+ ++V Y +ID C +A + EM G+ P+ VT+ L + N G
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ +C +V + LF + +G PNV+ YTT+I G+CR G + A +F EM+ G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 61 LPNSLTYSVLVRGVLRTRD 79
LPNS TY+ L+R LR D
Sbjct: 567 LPNSGTYNTLIRARLRDGD 585
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 247/503 (49%), Gaps = 42/503 (8%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C S++ A + M G+ P++V+ +L++G+C + A + +M G P+
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
S T++ L+ G+ R A L+ ++ + + DL + +V+ LC+ G ++
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDL----VTYGIVVNGLCKRGDIDLA 240
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ + M QGK +ID+LC + A + M +G+ P++V+YNS++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC +G A +LL + I+ P+ T+ L++ E L +A K+ M+ K+ +D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI-KRSID- 358
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
PD+ T +++INGFC R++EA K +
Sbjct: 359 ---------------------------------PDIFTYSSLINGFCMHDRLDEA-KHMF 384
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+++ K C P+ VT+ T+I G R+ E + L ++ M QRG VTY ++ G F+
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL-FREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
R + A+ VF M+ GV+ D TY+I++DGLC + +++ A ++ + D Y
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y MI+G+C++GK+ + L GV PN+V Y ++ G C+ +K EA + REM+
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 484 KNGLNPDAVTWRILDKLHGNRGN 506
+ G PD+ T+ L + H G+
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGD 586
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 243/489 (49%), Gaps = 7/489 (1%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
++ +A LF DM P++V ++ L+ + + D+ + ++M++ G+ N TYS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+L+ R + A ++ K+ + E + +++N+ L++ C +++ +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS-----LLNGFCHGNRISDAVSLVG 175
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M + + F +I L R R A +V M +G P LV+Y +V+GLCK G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
A LL++ Q P Y +++ LC ++ A + M +K N
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 249 IYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAG 308
+R LC ++ +L M++ + P+V+T + +I+ F K G++ EA K+ ++M+
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK- 354
Query: 309 KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVE 368
+ PD T++++I G R+ EA ++ +++M + P +VTYN +++G + +RV+
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHM-FELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMI 428
E E+F M G+V ++ TY +I G ++ + D A+ + +V + D Y+ ++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 429 KGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 488
GLC +GK+ A+ L S + P+I YN++I+G CK + + + + G+
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 489 PDAVTWRIL 497
P+ VT+ +
Sbjct: 534 PNVVTYTTM 542
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 237/508 (46%), Gaps = 49/508 (9%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ C +R+ +A L M G+ P+ ++ TLIHG R A + D M G
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC 217
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ +TY ++V G+ + D++ A L+ K+ E+ K E + + N ++D+LC V
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNT----IIDALCNYKNV 272
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
N+ + +M +I LC GR ASR++ M +R + P++V+++++
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ K G + A +L +E I+ P TY L+ G C L++A+ + + M+SK
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-- 390
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
C P+V+T NT+I GFCK R++E ++
Sbjct: 391 ---------------------------------DCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ +M + + + VT+TT+I G A ++++ M G P I+TY+ +L G
Sbjct: 418 LFREM-SQRGLVGNTVTYTTLIHGFFQARECDNA-QIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS--NI 418
L +VE A VF + + D TY I+I+G+C++ ++++ WD S +
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG---WDLFCSLSLKGV 532
Query: 419 HDNYV-YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQ 477
N V Y M+ G CR G EA E+ + G P+ YN +I + K + +
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 478 ILREMRKNGLNPDAVTWRIL-DKLHGNR 504
++REMR DA T ++ + LH R
Sbjct: 593 LIREMRSCRFVGDASTIGLVTNMLHDGR 620
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 185/396 (46%), Gaps = 39/396 (9%)
Query: 107 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 166
F+ L+ ++ + + V + E M + + +I+ CR + A V+ M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 167 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 226
K G P +V+ NS+++G C A L+ + ++ GY P T+ L+ GL +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 227 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 286
+A + VDR M+ CQPD++T V+
Sbjct: 204 EAVAL---------VDR--------------------------MVVKGCQPDLVTYGIVV 228
Query: 287 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 346
NG CK G I+ AL +L M GK P V + TII L N + +ALNL + M +G
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKI-EPGVVIYNTIIDALCNYKNVNDALNLFTE-MDNKG 286
Query: 347 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 406
P +VTYN+++R L R +A + + M+ + + T++ +ID + +L EA+
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 407 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 466
+ +D+++ S D + Y+++I G C ++ EA H ++ PN+V YN +I G
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 467 CKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 502
CK E ++ REM + GL + VT+ L +HG
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTL--IHG 440
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 2/244 (0%)
Query: 262 ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 321
+ +N+ M++++ P ++ + +++ KM + + + L + + + + T++ +
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVIS-LGEQMQNLGISHNLYTYSIL 122
Query: 322 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG 381
I ++ AL +L ++M + GY P IVT N++L G R+ +A + M+ +G
Sbjct: 123 INCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 382 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 441
DS T+ +I GL N+ EA D +V D Y ++ GLC+ G I A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 442 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 501
L ++ + P +V YN +ID C +A + EM G+ P+ VT+ L +
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 502 GNRG 505
N G
Sbjct: 302 CNYG 305
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 221 bits (564), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 241/486 (49%), Gaps = 12/486 (2%)
Query: 13 AHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVR 72
A +F+DM SR P + ++ ++ +C E+D A + +M G +PNS+ Y L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 73 GVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ 132
+ + V A +L E M + + F +++ LC+ +NE ++ M
Sbjct: 261 SLSKCNRVNEA----LQLLEEMFLMGCVP-DAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 133 GKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMR 192
++ G++++ LC+ GR A + Y + K P +V +N+++HG HG
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDD 371
Query: 193 AYQLLEEGI-QFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYL 251
A +L + + +G +P TY L+ G E + A +VL M +K I +
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 252 RALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFC 311
C + E NVL M +P+ + N +I+ FCK RI EA+++ +M K C
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM-PRKGC 490
Query: 312 APDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAK 371
PD TF ++I GL V I+ AL LL ++ + G VTYN ++ R ++EA+
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 372 EVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGL 431
++ N M+ G D TY +I GLC + ++D+A+ ++ ++ + N +I GL
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 432 CRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDA 491
CRSG + EAV F E+V G TP+IV +N +I+G C+ + + R+++ G+ PD
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 492 VTWRIL 497
VT+ L
Sbjct: 670 VTFNTL 675
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 253/498 (50%), Gaps = 12/498 (2%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
M C ++ + A L DM G VPN V Y TLIH + ++ A ++ +EM G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+P++ T++ ++ G+ + + A ++ ++ R +D++ + L++ LC+ G V
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT-----YGYLMNGLCKIGRV 338
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVM-RKRGLTPSLVSYNS 179
+ + +P+ + V +I GR A V+ M G+ P + +YNS
Sbjct: 339 DAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 180 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 239
+++G K G A ++L + G P+ ++Y +LV+G C +++A VL M +
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 240 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 299
T N + A C E + + M + C+PDV T N++I+G C++ I+ AL
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
+L DM++ A + VT+ T+I L G I+EA L+ +++ Q G +TYN++++
Sbjct: 515 WLLRDMISEGVVA-NTVTYNTLINAFLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLIK 572
Query: 360 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
GL R V++A+ +F ML G + + I+I+GLC S ++EA F ++V +
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 479
D + ++I GLCR+G+I + + +L G+ P+ V +N ++ CK +A +L
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 480 REMRKNGLNPDAVTWRIL 497
E ++G P+ TW IL
Sbjct: 693 DEGIEDGFVPNHRTWSIL 710
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 208/468 (44%), Gaps = 9/468 (1%)
Query: 32 YTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLW 91
Y LI GE ++ +M+ G++ + ++R + + LM ++
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 92 ERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCR 151
E N LV C + N + DM K F G ++ + C
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY----DMLSRKIPPTLFTFGVVMKAFCA 229
Query: 152 SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHT 211
A ++ M K G P+ V Y +++H L K A QLLEE G +P T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 212 YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML 271
+ ++ GLC + +A K++ ML + + LC I + L + +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR-VDAAKDLFYRI 348
Query: 272 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRI 331
+P+++ NT+I+GF GR+++A VL+DMV PD T+ ++I+G G +
Sbjct: 349 P---KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 332 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 391
AL +L+ M +G P + +Y ++ G +L +++EA V N M G+ ++ +
Sbjct: 406 GLALEVLHD-MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 392 VIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSG 451
+I C+ +++ EA + ++ D Y + ++I GLC +I A+ L +++ G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 452 VTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 499
V N V YN +I+ + +EA +++ EM G D +T+ L K
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 204/432 (47%), Gaps = 18/432 (4%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC R+ EA K+ M RG P+ ++Y L++G C+ G +D A +F + P
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PE 352
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ ++ L+ G + ++ A ++ + D+ N+ L+ +EG V
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS----LIYGYWKEGLVGLA 408
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ DM ++ ++D C+ G+ A V+ M GL P+ V +N ++
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
CK A ++ E + G P +T+ L+ GLC +++ A +L+ M+S+ V
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 244 TRICNIYLRALCL---IKNPTELLNVLVFMLQTQCQP-DVITLNTVINGFCKMGRIEEAL 299
T N + A IK +L+N +VF Q P D IT N++I G C+ G +++A
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVF----QGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
+ M+ AP ++ +I GL G ++EA+ + M RG +P IVT+N+++
Sbjct: 585 SLFEKMLRDGH-APSNISCNILINGLCRSGMVEEAVEFQKE-MVLRGSTPDIVTFNSLIN 642
Query: 360 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
GL R R+E+ +F + G+ D+ T+ ++ LC+ + +A D+ + +
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 420 DNYVYAAMIKGL 431
++ ++ +++ +
Sbjct: 703 NHRTWSILLQSI 714
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 193/422 (45%), Gaps = 9/422 (2%)
Query: 88 FKLWERM---KEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 144
FK +R+ ++E + + F +++ + G+ + R+ +M S F +
Sbjct: 127 FKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYN 186
Query: 145 MIDSLCRSGRNHG-ASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 203
++ + SG H A+ V Y M R + P+L ++ ++ C A LL + +
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 204 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 263
G +P+ Y+ L+ L + + +A ++L+ M V N + LC E
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 264 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 323
++ ML PD IT ++NG CK+GR++ A + + P+ V F T+I
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY-----RIPKPEIVIFNTLIH 361
Query: 324 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 383
G + GR+ +A +L ++ G P + TYN+++ G ++ V A EV + M G
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 384 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 443
+ +Y I++DG C+ ++DEA +++ + + +I C+ +I EAV
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 444 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGN 503
E+ G P++ +N +I G C++ + A +LR+M G+ + VT+ L
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 504 RG 505
RG
Sbjct: 542 RG 543
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 119/226 (52%), Gaps = 5/226 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + + A L DM S G V N V+Y TLI+ + R GE+ A K+ +EM G +
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TY+ L++G+ R +V++A L K+ ++S N L++ LCR G V E
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI-----LINGLCRSGMVEEA 618
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
++M S + +I+ LCR+GR + ++ G+ P V++N+++
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 229
LCK G A LL+EGI+ G++P+ T+ +L++ + + L++ R
Sbjct: 679 LCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 242/511 (47%), Gaps = 60/511 (11%)
Query: 13 AHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVR 72
A +F +M PNV +Y LI G+C G +DVA +FD+M G LPN +TY+ L+
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 73 GVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ 132
G + R ++ FKL M + L N ++ +++ LCREG + EV + +M +
Sbjct: 249 GYCKLRKIDDG----FKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 133 GKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMR 192
+E +I C+ G H A + M + GLTPS+++Y S++H +CK G R
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 193 AYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLR 252
A + L++ G P+E TY LV+G + + +A +VL+ M
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN---------------- 407
Query: 253 ALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA 312
P V+T N +ING C G++E+A+ VL DM K +
Sbjct: 408 -------------------DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLS 447
Query: 313 PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKE 372
PD V+++T++ G + EAL + + M ++G P +TY+++++G RR +EA +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKRE-MVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 373 VFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLC 432
++ ML +G+ D TY +I+ C L++A + +++V + D Y+ +I GL
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 433 RSGKIHEAVHFLYELVDSGVTPNIVCYNVVID---------------GACKLSMKREAYQ 477
+ + EA L +L P+ V Y+ +I+ G C M EA Q
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 478 ILREMRKNGLNPDAVTWRILDKLHGN-RGND 507
+ M PD + I+ +HG+ R D
Sbjct: 627 VFESMLGKNHKPDGTAYNIM--IHGHCRAGD 655
Score = 214 bits (546), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 241/505 (47%), Gaps = 57/505 (11%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C + A LF M+++G +PNVV+Y TLI GYC+ ++D +K+ M G+ PN
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
++Y+V++ G LCREG + EV
Sbjct: 275 LISYNVVING----------------------------------------LCREGRMKEV 294
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ +M + +E +I C+ G H A + M + GLTPS+++Y S++H
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
+CK G RA + L++ G P+E TY LV+G + + +A +VL+ M
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
N + C+ + + VL M + PDV++ +TV++GFC+ ++EAL+V
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+MV K PD +T++++I G R +EA + LY+ M + G P TY A++
Sbjct: 475 EMVE-KGIKPDTITYSSLIQGFCEQRRTKEACD-LYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+E+A ++ N M+ GV+ D TY+++I+GL + ++ EAKR + + ++ +
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 424 Y---------------AAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACK 468
Y ++IKG C G + EA ++ P+ YN++I G C+
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 469 LSMKREAYQILREMRKNGLNPDAVT 493
R+AY + +EM K+G VT
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVT 677
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 242/492 (49%), Gaps = 43/492 (8%)
Query: 7 LSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGE-MDVAYKVFDEMRHCGVLPNSL 65
LS + +A + ++ G +P V+SY ++ R+ + A VF EM V PN
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVF 206
Query: 66 TYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFR 125
TY++L+RG +++ A L+++M+ + L N + L+D C+ +++ F+
Sbjct: 207 TYNILIRGFCFAGNIDVA----LTLFDKMETKGCLP-NVVTYNTLIDGYCKLRKIDDGFK 261
Query: 126 IAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLC 185
+ M + +I+ LCR GR S V+ M +RG + V+YN+++ G C
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 186 KHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTR 245
K G +A + E ++ G PS TY L+ +C ++ +A + L D+ R
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL---------DQMR 372
Query: 246 ICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDM 305
+ R LC P+ T T+++GF + G + EA +VL +M
Sbjct: 373 V-----RGLC---------------------PNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 306 VAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLR 365
F +P VT+ +I G G++++A+ +L + M ++G SP +V+Y+ VL G R
Sbjct: 407 NDNGF-SPSVVTYNALINGHCVTGKMEDAIAVL-EDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 366 RVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYA 425
V+EA V M+ G+ D+ TY+ +I G CE + EA +++++ D + Y
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 426 AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKN 485
A+I C G + +A+ E+V+ GV P++V Y+V+I+G K S REA ++L ++
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 486 GLNPDAVTWRIL 497
P VT+ L
Sbjct: 585 ESVPSDVTYHTL 596
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 235/508 (46%), Gaps = 22/508 (4%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D C L ++ + KL M +G PN++SY +I+G CR G M V EM G
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 306
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+ +TY+ L++G + + +A V+ ++ L+ + + +L+ S+C+ G +
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH-----GLTPSVITYTSLIHSMCKAGNM 361
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
N + M E ++D + G + A RV+ M G +PS+V+YN++
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
++G C G A +LE+ + G P +Y ++ G C D+++A +V + M+ K
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
T + ++ C + E ++ ML+ PD T +IN +C G +E+AL+
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYN----- 355
+ N+MV K PD VT++ +I GL R +EA LL ++ + P VTY+
Sbjct: 542 LHNEMVE-KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIEN 599
Query: 356 ----------AVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEA 405
++++G + EA +VF MLG D T Y I+I G C + + +A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 406 KRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDG 465
+ ++V + A++K L + GK++E + ++ S V+++
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 466 ACKLSMKREAYQILREMRKNGLNPDAVT 493
+ +L EM K+G P+ ++
Sbjct: 720 NHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 2/198 (1%)
Query: 310 FCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRR-VE 368
C + F ++ + I +AL++++ + G+ PG+++YNAVL R +R +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMI 428
A+ VF ML V + TY I+I G C + +D A +D + + + Y +I
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 429 KGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 488
G C+ KI + L + G+ PN++ YNVVI+G C+ +E +L EM + G +
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 489 PDAVTWRILDKLHGNRGN 506
D VT+ L K + GN
Sbjct: 308 LDEVTYNTLIKGYCKEGN 325
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 245/494 (49%), Gaps = 42/494 (8%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C S++ A + M G+ PN+V+ ++L++GYC + + A + D+M G PN
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
++T++ L+ G+ A L+ ++ + + DL + +V+ LC+ G +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDL----VTYGVVVNGLCKRGDTDLA 240
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
F + M QGK +ID LC+ A + M +G+ P++V+Y+S++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC +G A +LL + I+ P T+ L++ E L +A K+ M+ K+ +D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV-KRSID- 358
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
P ++T +++INGFC R++EA ++
Sbjct: 359 ---------------------------------PSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
MV+ K C PD VT+ T+I G R++E + + ++ M QRG VTYN +++GLF+
Sbjct: 386 FMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEV-FREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+ A+E+F M+ GV + TY ++DGLC++ +L++A ++ + Y
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y MI+G+C++GK+ + L GV P++V YN +I G C+ K EA + +EM+
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 484 KNGLNPDAVTWRIL 497
++G P++ + L
Sbjct: 564 EDGTLPNSGCYNTL 577
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 234/501 (46%), Gaps = 43/501 (8%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C R+ EA L M G+ PN V++ TLIHG + A + D M G P+
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
+TY V+V G+ + D + L F L +M E+ L + ++D LC+ ++++
Sbjct: 222 VTYGVVVNGLCKRGDTD----LAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+ ++M +I LC GR ASR++ M +R + P + ++++++
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
K G + A +L +E ++ PS TY L+ G C L++A+++ +FM+SK
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK------ 390
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
C PDV+T NT+I GFCK R+EE ++V +
Sbjct: 391 -----------------------------HCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M + + + VT+ +I GL G A +++ M G P I+TYN +L GL +
Sbjct: 422 M-SQRGLVGNTVTYNILIQGLFQAGDCDMAQE-IFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVY 424
++E+A VF + + TY I+I+G+C++ ++++ + ++ D Y
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 425 AAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRK 484
MI G CR G EA E+ + G PN CYN +I + + + ++++EMR
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 485 NGLNPDAVTWRIL-DKLHGNR 504
G DA T ++ + LH R
Sbjct: 600 CGFAGDASTIGLVTNMLHDGR 620
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 229/494 (46%), Gaps = 44/494 (8%)
Query: 6 GLS--RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
GLS ++ +A LF +M P+++ ++ L+ + + DV + ++M++ G+ N
Sbjct: 56 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 115
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
TYS+L+ R + A ++ K+ + GY +
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMM------------------------KLGYEPNI 151
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
++ +++ C S R A +V M G P+ V++N+++HG
Sbjct: 152 VTLSS----------------LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
L H A L++ + G P TY V+V GLC D + A +L M K
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
I N + LC K+ + LN+ M +P+V+T +++I+ C GR +A ++L+
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
DM+ K PD TF+ +I + G++ EA LY M +R P IVTY++++ G
Sbjct: 316 DMIERKI-NPDVFTFSALIDAFVKEGKLVEA-EKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
R++EAK++F M+ D TY +I G C+ +++E + ++ + +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y +I+GL ++G A E+V GV PNI+ YN ++DG CK +A + ++
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 484 KNGLNPDAVTWRIL 497
++ + P T+ I+
Sbjct: 494 RSKMEPTIYTYNIM 507
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 191/408 (46%), Gaps = 12/408 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC A L M+ P V+ Y T+I G C+ MD A +F EM G+ PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TYS L+ + A+ L+ + ER ++ + F+ L+D+ +EG + E
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIER-----KINPDVFTFSALIDAFVKEGKLVEA 345
Query: 124 FRIAEDMPQGKSVNEEFAC-GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVH 182
++ ++M + +S++ +I+ C R A ++ M + P +V+YN+++
Sbjct: 346 EKLYDEMVK-RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 183 GLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVD 242
G CK+ ++ E Q G + + TY +L++GL D + A+++ + M+S
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 243 RTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVL 302
N L LC + + V ++ +++ +P + T N +I G CK G++E+ +
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 303 NDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLF 362
++ + K PD V + T+I G G +EA + L++ M + G P YN ++R
Sbjct: 525 CNL-SLKGVKPDVVAYNTMISGFCRKGSKEEA-DALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 363 RLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
R E + E+ M G D++T +V + L +LD K F D
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLD--KSFLD 627
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 2/328 (0%)
Query: 172 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 231
PS++ ++ ++ + K L E+ G + +TY +L+ C S L A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 232 LQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCK 291
L M+ + L C K +E + ++ M T QP+ +T NT+I+G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 292 MGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGI 351
+ EA+ +++ MVA K C PD VT+ ++ GL G A NLL + M Q PG+
Sbjct: 199 HNKASEAMALIDRMVA-KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK-MEQGKLEPGV 256
Query: 352 VTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDD 411
+ YN ++ GL + + +++A +F M G+ + TY+ +I LC + +A R D
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 412 IVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSM 471
++ D + ++A+I + GK+ EA E+V + P+IV Y+ +I+G C
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 472 KREAYQILREMRKNGLNPDAVTWRILDK 499
EA Q+ M PD VT+ L K
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ +C +V + LF ++ +G P+VV+Y T+I G+CR G + A +F EM+ G
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLS-VNNAAFANLVDSLCREGY 119
LPNS Y+ L+R LR D E + E +KE +A+ LV ++ +G
Sbjct: 568 LPNSGCYNTLIRARLRDGDREAS-------AELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Query: 120 VNEVF 124
+++ F
Sbjct: 621 LDKSF 625
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 246/486 (50%), Gaps = 15/486 (3%)
Query: 20 MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD 79
M+ G ++ + T +I+ YCR ++ A+ V G P+++T+S LV G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 80 VERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 139
V A L+ ++ E MK+ DL + L++ LC +G V+E + + M + +E
Sbjct: 156 VSEAVALVDRMVE-MKQRPDL----VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210
Query: 140 FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE 199
G +++ LC+SG + A + M +R + S+V Y+ ++ LCK G A L E
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 200 GIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD----VDRTRICNIYLRALC 255
G TY L+ GLC + + K+L+ M+ + V + + +++++
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 256 LIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 315
L++ EL N M+ PD IT N++I+GFCK + EA ++ D++ K C PD
Sbjct: 331 LLE-AKELYNE---MITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDI 385
Query: 316 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 375
VT++ +I R+ + + L ++ +G P +TYN ++ G + ++ AKE+F
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREI-SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 376 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSG 435
M+ GV TY I++DGLC++ +L++A ++ + +Y +I G+C +
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 436 KIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR 495
K+ +A L D GV P++V YNV+I G CK EA + R+M+++G PD T+
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYN 564
Query: 496 ILDKLH 501
IL + H
Sbjct: 565 ILIRAH 570
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 239/507 (47%), Gaps = 54/507 (10%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C RV EA L M P++V+ +TLI+G C G + A + D M G P+
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TY ++ + ++ + + L L+ +M EE ++ + ++ ++DSLC++G ++
Sbjct: 210 EVTYGPVLNRLCKSGN----SALALDLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ +M + +I LC G+ ++++ M R + P +V++++++
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
K G + A +L E I G P TY L++G C E+ L +A ++ M+SK
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK----- 379
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
C+PD++T + +IN +CK R+++ +++
Sbjct: 380 ------------------------------GCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+ ++ K P+ +T+ T++ G G++ A L+Q M RG P +VTY +L GL
Sbjct: 410 E-ISSKGLIPNTITYNTLVLGFCQSGKLNAAKE-LFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 364 LRRVEEAKEVFNCM------LGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSN 417
+ +A E+F M LGIG+ Y I+I G+C ++++D+A + +
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGI------YNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 418 IHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQ 477
D Y MI GLC+ G + EA ++ + G TP+ YN++I S + +
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 478 ILREMRKNGLNPDAVTWRILDKLHGNR 504
++ EM+ G + D+ T +++ + +R
Sbjct: 582 LIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 228/494 (46%), Gaps = 44/494 (8%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
+V +A LF M +P + + L RT + D+ M G+ + T +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+++ R + + A ++ + W+ E + ++ F+ LV+ C EG V+E + +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTIT-----FSTLVNGFCLEGRVSEAVALVD 164
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M + K + +I+ LC GR A ++ M + G P V+Y +++ LCK G
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
A L + + S Y ++++ LC + + A +
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF---------------- 268
Query: 249 IYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAG 308
N E+ + + DV+T +++I G C G+ ++ K+L +M+ G
Sbjct: 269 ----------NEMEMKGI---------KADVVTYSSLIGGLCNDGKWDDGAKMLREMI-G 308
Query: 309 KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVE 368
+ PD VTF+ +I + G++ EA L Y M RG +P +TYN+++ G + +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKEL-YNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMI 428
EA ++F+ M+ G D TY+I+I+ C++ ++D+ R + +I I + Y ++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 429 KGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 488
G C+SGK++ A E+V GV P++V Y +++DG C +A +I +M+K+ +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 489 PDAVTWRILDKLHG 502
+ I+ +HG
Sbjct: 488 LGIGIYNII--IHG 499
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 187/410 (45%), Gaps = 45/410 (10%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC +A LF +M+ +G +VV+Y++LI G C G+ D K+ EM +
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+P+ +T+S L+ ++ + A L ++ R ++ + + +L+D C+E +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-----GIAPDTITYNSLIDGFCKENCL 366
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+E ++ + M + +I+S C++ R R+ + +GL P+ ++YN++
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
V G C+ G A +L +E + G PS TY +L++GLC +L KA ++ + M +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
I NI + +C + ++ + +PDV+T N +I G CK G + EA
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA-- 544
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
++L++ M + G +P TYN ++R
Sbjct: 545 -----------------------------------DMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
+ + E+ M G ADS+T +VID L + +LD K F D
Sbjct: 570 HLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD-RRLD--KSFLD 616
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 235/491 (47%), Gaps = 50/491 (10%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
+C L R+ EAH L M+ +G+ P+V+SY+T+++GYCR GE+D +K+ + M+ G+ PN
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 64 SLTYSVLVRGVL----RTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGY 119
S Y ++ G+L + + E A M + + + + + L+D C+ G
Sbjct: 316 SYIYGSII-GLLCRICKLAEAEEAFSEMIR--------QGILPDTVVYTTLIDGFCKRGD 366
Query: 120 VNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 179
+ + +M + +I C+ G A ++ + M +GL P V++
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 180 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 239
+++G CK G A+++ IQ G P+ TY L++GLC E DL+ A ++L M
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW--- 483
Query: 240 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 299
+ QP++ T N+++NG CK G IEEA+
Sbjct: 484 --------------------------------KIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
K++ + A A D VT+TT++ G + +A +L + M +G P IVT+N ++
Sbjct: 512 KLVGEFEAAGLNA-DTVTYTTLMDAYCKSGEMDKAQEILKE-MLGKGLQPTIVTFNVLMN 569
Query: 360 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
G +E+ +++ N ML G+ ++TT+ ++ C N L A + D+
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 479
D Y ++KG C++ + EA E+ G + ++ Y+V+I G K EA ++
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 480 REMRKNGLNPD 490
+MR+ GL D
Sbjct: 690 DQMRREGLAAD 700
Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 217/430 (50%), Gaps = 19/430 (4%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + ++ EA + F +M +G +P+ V YTTLI G+C+ G++ A K F EM + P+
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
LTY+ ++ G + D+ A L +++ + L ++ F L++ C+ G++ +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCK-----GLEPDSVTFTELINGYCKAGHMKDA 440
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
FR+ M Q +ID LC+ G A+ +++ M K GL P++ +YNSIV+G
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LCK G A +L+ E G TY L++ C +++KA+++L+ ML K
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 244 TRICNIYLRALCL---IKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
N+ + CL +++ +LLN +ML P+ T N+++ +C ++ A
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLN---WMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ DM + + PD T+ ++ G ++EA L+Q M +G+S + TY+ +++G
Sbjct: 618 IYKDMCS-RGVGPDGKTYENLVKGHCKARNMKEAW-FLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
+ ++ EA+EVF+ M G+ AD + D + + D D+I+ +
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII------E 729
Query: 421 NYVYAAMIKG 430
NY+ ++G
Sbjct: 730 NYLVDEQLRG 739
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 228/497 (45%), Gaps = 13/497 (2%)
Query: 10 VGEAHKLFFDM-----KSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
V ++ FFD+ K G P V + G + A +VF++M + G++ +
Sbjct: 153 VTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 210
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
+ +V + + + +++F R E + N A++ ++ +C+ G + E
Sbjct: 211 DSCNVYLTRLSKDCYKTATAIIVF----REFPEVGVCWNVASYNIVIHFVCQLGRIKEAH 266
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+ M + + +++ CR G +++ VM+++GL P+ Y SI+ L
Sbjct: 267 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
C+ A + E I+ G LP Y L++G C D+ A K M S+
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
+ C I + E + M +PD +T +ING+CK G +++A +V N
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M+ C+P+ VT+TT+I GL G + A LL++ M + G P I TYN+++ GL +
Sbjct: 447 MIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHE-MWKIGLQPNIFTYNSIVNGLCKS 504
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVY 424
+EEA ++ G+ AD+ TY ++D C+S ++D+A+ +++ +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 425 AAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRK 484
++ G C G + + L ++ G+ PN +N ++ C + + A I ++M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 485 NGLNPDAVTWRILDKLH 501
G+ PD T+ L K H
Sbjct: 625 RGVGPDGKTYENLVKGH 641
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 187/362 (51%), Gaps = 2/362 (0%)
Query: 145 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 204
+I +C+ GR A ++ +M +G TP ++SY+++V+G C+ G + ++L+E + G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 205 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 264
P+ + Y ++ LC L +A + M+ + + T + + C +
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 265 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 324
M PDV+T +I+GFC++G + EA K+ ++M K PD+VTFT +I G
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELING 430
Query: 325 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 384
G +++A + + M Q G SP +VTY ++ GL + ++ A E+ + M IG+
Sbjct: 431 YCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 385 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 444
+ TY +++GLC+S ++EA + + D Y ++ C+SG++ +A L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 445 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNR 504
E++ G+ P IV +NV+++G C M + ++L M G+ P+A T+ L K + R
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 505 GN 506
N
Sbjct: 610 NN 611
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 206/455 (45%), Gaps = 24/455 (5%)
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMK----------------EEEDLSVNNAAFANLVD 112
+++ + ++D++ A L+ WER K +D + F
Sbjct: 124 IVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQ 183
Query: 113 SLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY-VMRKRGLT 171
L G + E R+ E M V +C + L + + +V+ + G+
Sbjct: 184 VLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC 243
Query: 172 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 231
++ SYN ++H +C+ G A+ LL GY P +Y +V G C +L+K K+
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 232 LQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCK 291
++ M K + I + LC I E M++ PD + T+I+GFCK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 292 MGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGI 351
G I A K +M + PD +T+T II G +G + EA L ++ M +G P
Sbjct: 364 RGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE-MFCKGLEPDS 421
Query: 352 VTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDD 411
VT+ ++ G + +++A V N M+ G + TY +IDGLC+ LD A +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 412 IVWPSNIHDN-YVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLS 470
+ W + N + Y +++ GLC+SG I EAV + E +G+ + V Y ++D CK
Sbjct: 482 M-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 471 MKREAYQILREMRKNGLNPDAVTWRILDK---LHG 502
+A +IL+EM GL P VT+ +L LHG
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 238/490 (48%), Gaps = 42/490 (8%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C S++ A L M G+ P++V+ ++L++GYC + A + D+M G P+
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
++T++ L+ G+ A L+ ++ +R N + +V+ LC+ G ++
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQR-----GCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
F + M K +IDSLC+ A + M +G+ P++++Y+S++
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC + A +LL + I+ P+ T+ L++ E L +A K+ M+ K+ +D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI-KRSID- 362
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
PD+ T +++INGFC R++EA +
Sbjct: 363 ---------------------------------PDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
M++ K C P+ VT+ T+I G RI E + L ++ M QRG VTY ++ G F+
Sbjct: 390 LMIS-KDCFPNVVTYNTLINGFCKAKRIDEGVEL-FREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
R + A+ VF M+ GV + TY ++DGLC++ +L++A ++ + Y
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y MI+G+C++GK+ + L GV P+++ YN +I G C+ +K EA + R+MR
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 484 KNGLNPDAVT 493
++G PD+ T
Sbjct: 568 EDGPLPDSGT 577
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 220/466 (47%), Gaps = 7/466 (1%)
Query: 32 YTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLW 91
Y ++ + ++D A +F M LP+ ++ L+ + + + + L+ L
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD----LVISLG 108
Query: 92 ERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCR 151
E+M + +S N + L++ CR ++ + M + +++ C
Sbjct: 109 EKM-QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 152 SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHT 211
R A +V M + G P +++ +++HGL H A L++ +Q G P+ T
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 212 YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML 271
Y V+V GLC D++ A +L M + K I + + +LC ++ + LN+ M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 272 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRI 331
+P+VIT +++I+ C R +A ++L+DM+ K P+ VTF +I + G++
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI-NPNVVTFNALIDAFVKEGKL 346
Query: 332 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 391
EA LY M +R P I TY++++ G R++EAK +F M+ + TY
Sbjct: 347 VEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 392 VIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSG 451
+I+G C++ ++DE + ++ + + Y +I G ++ A ++V G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 452 VTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
V PNI+ YN ++DG CK +A + ++++ + P T+ I+
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 237/490 (48%), Gaps = 9/490 (1%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
++ +A LF M +P++ + L+ + + D+ + ++M+ G+ N TY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+L+ R + A L+ K+ MK + S+ ++L++ C +++ + +
Sbjct: 125 ILINCFCRRSQISLALALLGKM---MKLGYEPSI--VTLSSLLNGYCHGKRISDAVALVD 179
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M + + +I L + A +V M +RG P+LV+Y +V+GLCK G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
A+ LL + + Y +++ LC + A + M +K +
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 249 IYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAG 308
+ LC + ++ +L M++ + P+V+T N +I+ F K G++ EA K+ ++M+
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK- 358
Query: 309 KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVE 368
+ PD T++++I G R+ EA ++ +++M + P +VTYN ++ G + +R++
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHM-FELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV-YAAM 427
E E+F M G+V ++ TY +I G ++ D A+ + +V +H N + Y +
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPNIMTYNTL 476
Query: 428 IKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 487
+ GLC++GK+ +A+ L S + P I YN++I+G CK + + + + G+
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 488 NPDAVTWRIL 497
PD + + +
Sbjct: 537 KPDVIIYNTM 546
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 172/338 (50%), Gaps = 4/338 (1%)
Query: 165 MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESD 224
M++ G++ +L +YN +++ C+ A LL + ++ GY PS T L+ G C
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 225 LEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNT 284
+ A ++ M+ T + L L +E + ++ M+Q CQP+++T
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 285 VINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQ 344
V+NG CK G I+ A +LN M A K A + V ++T+I L +ALNL + M
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEA-NVVIYSTVIDSLCKYRHEDDALNLFTE-MEN 288
Query: 345 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDE 404
+G P ++TY++++ L R +A + + M+ + + T+ +ID + +L E
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 405 AKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVID 464
A++ +D+++ S D + Y+++I G C ++ EA H ++ PN+V YN +I+
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 465 GACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 502
G CK E ++ REM + GL + VT+ L +HG
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL--IHG 444
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 142/305 (46%), Gaps = 5/305 (1%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC +A LF +M+++G PNV++Y++LI C A ++ +M +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +T++ L+ ++ + A L ++ +R + + + +++L++ C +
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT-----YSSLINGFCMHDRL 381
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+E + E M +I+ C++ R + M +RGL + V+Y ++
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+HG + C A + ++ + G P+ TY L++GLC LEKA V +++ K
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
NI + +C + ++ + +PDVI NT+I+GFC+ G EEA
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 301 VLNDM 305
+ M
Sbjct: 562 LFRKM 566
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ +C +V + LF + +G P+V+ Y T+I G+CR G + A +F +MR G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 61 LPNSLT 66
LP+S T
Sbjct: 572 LPDSGT 577
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC ++ +A +F ++ P + +Y +I G C+ G+++ + +F + GV
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 92
P+ + Y+ ++ G R E A+ L K+ E
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 247/483 (51%), Gaps = 42/483 (8%)
Query: 24 GHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 83
G N+ + +I+ +CR + AY V ++ G P++ T++ L++G+ V A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 84 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 143
VL+ ++ E + + ++ N+ +V+ +CR G + + M + + F
Sbjct: 178 VVLVDRMVENGCQPDVVTYNS-----IVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 144 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 203
+IDSLCR G A + M +G+ S+V+YNS+V GLCK G LL++ +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 204 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 263
+P+ T+ VL++ E L++A ++ + M+++
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR------------------------- 327
Query: 264 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 323
P++IT NT+++G+C R+ EA +L+ MV K C+PD VTFT++I
Sbjct: 328 ----------GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIK 376
Query: 324 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 383
G V R+ + + + ++ + +RG VTY+ +++G + +++ A+E+F M+ GV+
Sbjct: 377 GYCMVKRVDDGMKV-FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 384 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 443
D TY I++DGLC++ +L++A ++D+ +Y +I+G+C+ GK+ +A +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 444 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGN 503
L GV PN++ Y V+I G CK EA +LR+M ++G P+ T+ L + H
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 504 RGN 506
G+
Sbjct: 556 DGD 558
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 219/441 (49%), Gaps = 7/441 (1%)
Query: 24 GHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 83
G+ P+ ++ TLI G G++ A + D M G P+ +TY+ +V G+ R+ D A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 84 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 143
L+ K+ EE ++ + ++ ++DSLCR+G ++ + ++M +
Sbjct: 213 LDLLRKM-----EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 144 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQF 203
++ LC++G+ + + ++ M R + P+++++N ++ K G A +L +E I
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 204 GYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTEL 263
G P+ TY L++G C ++ L +A +L M+ K ++ C++K +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 264 LNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIF 323
+ V + + + +T + ++ GFC+ G+I+ A ++ +MV+ PD +T+ ++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV-LPDVMTYGILLD 446
Query: 324 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 383
GL + G++++AL + ++ + + GIV Y ++ G+ + +VE+A +F + GV
Sbjct: 447 GLCDNGKLEKALEI-FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 384 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 443
+ TY ++I GLC+ L EA + N ++ Y +I+ R G + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 444 LYELVDSGVTPNIVCYNVVID 464
+ E+ G + + +VID
Sbjct: 566 IEEMKSCGFSADASSIKMVID 586
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 230/486 (47%), Gaps = 42/486 (8%)
Query: 12 EAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLV 71
+A LF +M +P++V ++ RT + ++ ++ G+ N T ++++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 72 RGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMP 131
R A ++ K+ ++ E D F L+ L EG V+E + + M
Sbjct: 131 NCFCRCCKTCFAYSVLGKVM-KLGYEPD----TTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 132 QGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCM 191
+ + +++ +CRSG A ++ M +R + + +Y++I+ LC+ G
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 192 RAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYL 251
A L +E G S TY LV GLC +L+ M+S++ V
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV---------- 295
Query: 252 RALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFC 311
P+VIT N +++ F K G+++EA ++ +M+ +
Sbjct: 296 -------------------------PNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGI 329
Query: 312 APDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAK 371
+P+ +T+ T++ G R+ EA N+L +M + SP IVT+ ++++G ++RV++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 372 EVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGL 431
+VF + G+VA++ TY+I++ G C+S ++ A+ + ++V + D Y ++ GL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 432 CRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDA 491
C +GK+ +A+ +L S + IV Y +I+G CK +A+ + + G+ P+
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 492 VTWRIL 497
+T+ ++
Sbjct: 509 MTYTVM 514
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 193/410 (47%), Gaps = 45/410 (10%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC + A LF +M+++G +VV+Y +L+ G C+ G+ + + +M +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+PN +T++VL+ ++ ++ AN L ++ R +S N + L+D C + +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITR-----GISPNIITYNTLMDGYCMQNRL 349
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+E + + M + K + +I C R +V + KRGL + V+Y+ +
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
V G C+ G A +L +E + G LP TY +L++GLC LEKA ++ + D
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE------D 463
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
+ ++++ ++ T+I G CK G++E+A
Sbjct: 464 LQKSKM-----------------------------DLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ + K P+ +T+T +I GL G + EA N+L + M + G +P TYN ++R
Sbjct: 495 LFCSLPC-KGVKPNVMTYTVMISGLCKKGSLSEA-NILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
R + + ++ M G AD+++ +VID L S +LD K F D
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELD--KSFLD 599
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 45/97 (46%)
Query: 403 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVV 462
D+A + +++ + ++ + R+ + + + F +L +G+ NI N++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 463 IDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 499
I+ C+ AY +L ++ K G PD T+ L K
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 244/506 (48%), Gaps = 48/506 (9%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC S++ A + M G+ P++V+ +L++G+C + A + D+M G P+
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKE---EEDLSVNNAAFANLVDSLCREGYV 120
++T++ LV G+ + A L+ ERM + DL + +++ LC+ G
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALV----ERMVVKGCQPDL----VTYGAVINGLCKRGEP 221
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ + M +GK + +IDSLC+ A + M +G+ P + +Y+S+
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ LC +G A +LL + ++ P+ T+ L++ E L +A K+ M+
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI---- 337
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
Q P+++T N++INGFC R++EA +
Sbjct: 338 -------------------------------QRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ MV+ K C PD VT+ T+I G ++ + + L ++ M +RG VTY ++ G
Sbjct: 367 IFTLMVS-KDCLPDVVTYNTLINGFCKAKKVVDGMEL-FRDMSRRGLVGNTVTYTTLIHG 424
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
F+ + A+ VF M+ GV + TY ++DGLC++ +L++A ++ + D
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
Y Y M +G+C++GK+ + L GV P+++ YN +I G CK +K EAY +
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 481 EMRKNGLNPDAVTWRILDKLHGNRGN 506
+M+++G PD+ T+ L + H G+
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 244/505 (48%), Gaps = 43/505 (8%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ C +R+ EA L M G+ P+ V++TTL+HG + + A + + M G
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ +TY ++ G+ + + + A L+ K+ E+ K E D+ + ++ ++DSLC+ +V
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVI----YSTVIDSLCKYRHV 256
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
++ + +M + F +I LC GR ASR++ M +R + P++V++NS+
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ K G + A +L +E IQ P+ TY L+ G C L++A+++ M+SK
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK-- 374
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
C PDV+T NT+INGFCK ++ + ++
Sbjct: 375 ---------------------------------DCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ DM + + + VT+TT+I G A ++++ M G P I+TYN +L G
Sbjct: 402 LFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDNA-QMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
L + ++E+A VF + + D TY I+ +G+C++ ++++ + + D
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
Y MI G C+ G EA ++ + G P+ YN +I + K + ++++
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
Query: 481 EMRKNGLNPDAVTWRIL-DKLHGNR 504
EMR DA T+ ++ D LH R
Sbjct: 580 EMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 3/220 (1%)
Query: 294 RIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVT 353
+++EA+ + +MV + P V F+ ++ + + + ++ + M G S + T
Sbjct: 45 KLDEAVDLFGEMVKSR-PFPSIVEFSKLLSAIAKMKKFDLVISF-GEKMEILGVSHNLYT 102
Query: 354 YNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV 413
YN ++ L R ++ A + M+ +G T +++G C N++ EA D +V
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 414 WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKR 473
D + ++ GL + K EAV + +V G P++V Y VI+G CK
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 474 EAYQILREMRKNGLNPDAVTWR-ILDKLHGNRGNDFGLRI 512
A +L +M K + D V + ++D L R D L +
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 239/481 (49%), Gaps = 11/481 (2%)
Query: 20 MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD 79
M G P+V ++ LI CR ++ A + ++M G++P+ T++ +++G + D
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 80 VERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMP-QGKSVNE 138
++ A ++ E+M E S +N + +V C+EG V + ++M Q +
Sbjct: 240 LDGA----LRIREQMVEF-GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 139 EFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLE 198
++ +++ LC++G A ++ VM + G P + +YNS++ GLCK G A ++L+
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 199 EGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIK 258
+ I P+ TY L+ LC E+ +E+A ++ + + SK + N ++ LCL +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 259 NPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDM-VAGKFCAPDAVT 317
N + + M C+PD T N +I+ C G+++EAL +L M ++G CA +T
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG--CARSVIT 472
Query: 318 FTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM 377
+ T+I G + +EA ++ M G S VTYN ++ GL + RRVE+A ++ + M
Sbjct: 473 YNTLIDGFCKANKTREA-EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 378 LGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKI 437
+ G D TY ++ C + +A + D Y +I GLC++G++
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 438 HEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREM-RKNGLNPDAVTWRI 496
A L + G+ YN VI G + EA + REM +N PDAV++RI
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 497 L 497
+
Sbjct: 652 V 652
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 230/508 (45%), Gaps = 45/508 (8%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC ++ A + DM S G VP+ ++TT++ GY G++D A ++ ++M G +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+++ +V+V G + VE A + M ++ + F LV+ LC+ G+V
Sbjct: 259 NVSVNVIVHGFCKEGRVEDA----LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
I + M Q + + +I LC+ G A V+ M R +P+ V+YN+++
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LCK A +L G LP T+ L++GLC + A ++ + M SK
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
N+ + +LC E LN+L M + C VIT NT+I+GFCK + EA ++ +
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 304 DM-VAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLF 362
+M V G + ++VT+ T+I GL R+++A L+ Q M G P TYN++L
Sbjct: 495 EMEVHG--VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ-MIMEGQKPDKYTYNSLLTHFC 551
Query: 363 RLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNY 422
R +++A ++ M G D TY +I GLC++ +++ A + I +
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 423 VYAAMIKGLCRS-------------------------------------GKIHEAVHFLY 445
Y +I+GL R G I EAV FL
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 446 ELVDSGVTPNIVCYNVVIDGACKLSMKR 473
EL++ G P ++ +G LSM+
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGLLTLSMEE 699
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 219/460 (47%), Gaps = 42/460 (9%)
Query: 75 LRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGK 134
LR++ + A + +F L + + + S A + ++ L R G +++ +I EDM +
Sbjct: 57 LRSQPDDSAALRLFNLASK---KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSR 113
Query: 135 S---------VNEEFA-----------CGHMIDSLCRSGRNHGASRVVYV---------- 164
+ E +A MID H +R++ +
Sbjct: 114 CEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLV 173
Query: 165 ------MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEG 218
M G+ P + ++N ++ LC+ A +LE+ +G +P E T+ +++G
Sbjct: 174 EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 219 LCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML-QTQCQP 277
E DL+ A ++ + M+ N+ + C + LN + M Q P
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 278 DVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNL 337
D T NT++NG CK G ++ A+++++ M+ + PD T+ ++I GL +G ++EA+ +
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY-DPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 338 LYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLC 397
L Q M R SP VTYN ++ L + +VEEA E+ + G++ D T+ +I GLC
Sbjct: 353 LDQ-MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 398 ESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIV 457
+ A ++++ D + Y +I LC GK+ EA++ L ++ SG +++
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 458 CYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
YN +IDG CK + REA +I EM +G++ ++VT+ L
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 213/451 (47%), Gaps = 15/451 (3%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEM--RHCGVL 61
LC V A ++ M G+ P+V +Y ++I G C+ GE+ A +V D+M R C
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS-- 362
Query: 62 PNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVN 121
PN++TY+ L+ + + VE A L R+ + + + F +L+ LC
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELA-----RVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 122 EVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIV 181
+ E+M +EF +IDSLC G+ A ++ M G S+++YN+++
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 182 HGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDV 241
G CK A ++ +E G + TY L++GLC +E A +++ M+ +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 242 DRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKV 301
N L C + + +++ M C+PD++T T+I+G CK GR+E A K+
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 302 LNDM-VAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
L + + G P A + +I GL + EA+NL +++ Q P V+Y V RG
Sbjct: 598 LRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Query: 361 LFR-LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
L + EA + +L G V + ++ ++ +GL + + + + ++ +
Sbjct: 656 LCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFS 715
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDS 450
+ V +M+KGL + K +A+ L ++DS
Sbjct: 716 EEEV--SMVKGLLKIRKFQDALATLGGVLDS 744
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 181/417 (43%), Gaps = 78/417 (18%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC L V EA ++ M +R PN V+Y TLI C+ +++ A ++ + G+LP+
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
T++ L++G+ TR+ A L ++ + E ++ + N L+DSLC +G ++E
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM-----LIDSLCSKGKLDEA 454
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ + M +ID C++ + A + M G++ + V+YN+++ G
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLS---KKD 240
LCK A QL+++ I G P ++TY L+ C D++KA ++Q M S + D
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 241 V-------------DRTRICNIYLRALCL--------IKNP-----------TELLNVLV 268
+ R + + LR++ + NP TE +N+
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634
Query: 269 FML-QTQCQPDVITLNTVINGFCKMG-RIEEALKVLNDMVAGKFC---------APDAVT 317
ML Q + PD ++ V G C G I EA+ L +++ F A +T
Sbjct: 635 EMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLT 694
Query: 318 FT-----------------------TIIFGLLNVGRIQEALNLLYQVM----PQRGY 347
+ +++ GLL + + Q+AL L V+ P+R Y
Sbjct: 695 LSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTY 751
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 232/490 (47%), Gaps = 8/490 (1%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC V E KL + RG +PN+ +Y I G C+ GE+D A ++ + G P+
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TY+ L+ G+ + + A V + K+ E L ++ + L+ C+ G V
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMV-----NEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
RI D V ++F +ID LC G + A + +G+ P+++ YN+++ G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
L G + A QL E + G +P T+ +LV GLC + A +++ M+SK
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
NI + L +L ML PDV T N+++NG CK + E+ ++
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
MV K CAP+ TF ++ L ++ EAL LL + M + +P VT+ ++ G +
Sbjct: 521 TMVE-KGCAPNLFTFNILLESLCRYRKLDEALGLLEE-MKNKSVNPDAVTFGTLIDGFCK 578
Query: 364 LRRVEEAKEVFNCMLGIGVVADST-TYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNY 422
++ A +F M V+ ST TY I+I E + A++ + ++V D Y
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 423 VYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREM 482
Y M+ G C++G ++ FL E++++G P++ VI+ C EA I+ M
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 483 RKNGLNPDAV 492
+ GL P+AV
Sbjct: 699 VQKGLVPEAV 708
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 232/473 (49%), Gaps = 7/473 (1%)
Query: 12 EAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLV 71
+AHK++ M+ RG P+V S+T + +C+T A ++ + M G N + Y +V
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188
Query: 72 RGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMP 131
G E ++L+ +M +S+ + F L+ LC++G V E ++ + +
Sbjct: 189 GGFYE----ENFKAEGYELFGKMLAS-GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 132 QGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCM 191
+ + F I LC+ G GA R+V + ++G P +++YN++++GLCK+
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 192 RAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYL 251
A L + + G P +TY L+ G C ++ A +++ + V +
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 252 RALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFC 311
LC L + L +P+VI NT+I G G I EA ++ N+M + K
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGL 422
Query: 312 APDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAK 371
P+ TF ++ GL +G + +A L+ +VM +GY P I T+N ++ G ++E A
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLV-KVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 372 EVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGL 431
E+ + ML GV D TY +++GLC++++ ++ + +V + + + +++ L
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 432 CRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRK 484
CR K+ EA+ L E+ + V P+ V + +IDG CK AY + R+M +
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 229/524 (43%), Gaps = 77/524 (14%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
+V EA +F M P V SY ++ +G D A+KV+ MR G+ P+ +++
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+ ++ +T A +L M + +N A+ +V E + E + +
Sbjct: 151 IRMKSFCKTSRPHAA----LRLLNNM-SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M ++ LC+ G +++ + KRG+ P+L +YN + GLC+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
A +++ I+ G P TY L+ GLC S ++A
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE------------------- 306
Query: 249 IYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAG 308
+YL M+ +PD T NT+I G+CK G ++ A +++ D V
Sbjct: 307 VYLGK----------------MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 309 KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVE 368
F PD T+ ++I GL + G AL L + + +G P ++ YN +++GL +
Sbjct: 351 GF-VPDQFTYRSLIDGLCHEGETNRALALFNEAL-GKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEA---------KRFWDDI-VWPSNI 418
EA ++ N M G++ + T+ I+++GLC+ + +A K ++ DI + I
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 419 H-------------------------DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 453
H D Y Y +++ GLC++ K + + +V+ G
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 454 PNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
PN+ +N++++ C+ EA +L EM+ +NPDAVT+ L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 190/419 (45%), Gaps = 19/419 (4%)
Query: 88 FKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ--GKSVNEEFACGHM 145
+++ M++E + + ++++ L G + + DM + G + E G M
Sbjct: 24 LEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAM 83
Query: 146 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 205
+ R G+ A V M P++ SYN+I+ L G +A+++ G
Sbjct: 84 -KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 206 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKN------ 259
P +++ + ++ C S A ++L M S+ C + + A C +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-------CEMNVVAYCTVVGGFYEEN 195
Query: 260 -PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTF 318
E + ML + + T N ++ CK G ++E K+L D V + P+ T+
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL-DKVIKRGVLPNLFTY 254
Query: 319 TTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCML 378
I GL G + A+ ++ ++ Q G P ++TYN ++ GL + + +EA+ M+
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQ-GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 379 GIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIH 438
G+ DS TY +I G C+ + A+R D V+ + D + Y ++I GLC G+ +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 439 EAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
A+ E + G+ PN++ YN +I G M EA Q+ EM + GL P+ T+ IL
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 176/387 (45%), Gaps = 4/387 (1%)
Query: 116 REGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLV 175
R+G V E + E M F+ ++ L SG A +V MR RG+TP +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 176 SYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 235
S+ + CK A +LL G + Y +V G E+ + ++ M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 236 LSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRI 295
L+ N LR LC + E +L +++ P++ T N I G C+ G +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 296 EEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYN 355
+ A++++ ++ + PD +T+ +I+GL + QEA L + M G P TYN
Sbjct: 268 DGAVRMVGCLIE-QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK-MVNEGLEPDSYTYN 325
Query: 356 AVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWP 415
++ G + V+ A+ + + G V D TY +IDGLC + + A +++ +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 416 SNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREA 475
+ +Y +IKGL G I EA E+ + G+ P + +N++++G CK+ +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 476 YQILREMRKNGLNPDAVTWRILDKLHG 502
+++ M G PD T+ IL +HG
Sbjct: 446 DGLVKVMISKGYFPDIFTFNIL--IHG 470
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 8/353 (2%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC A LF + +G PNV+ Y TLI G G + A ++ +EM G+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+P T+++LV G+ + V A+ L+ + + + + N L+ + +
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN-----ILIHGYSTQLKM 477
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
I + M + + +++ LC++ + M ++G P+L ++N +
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ LC++ A LLEE P T+ L++G C DL+ A + + M
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 241 V-DRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 299
V T NI + A N T + M+ PD T +++GFCK G +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIV 352
K L +M+ F P T +I L R+ EA ++++ M Q+G P V
Sbjct: 658 KFLLEMMENGF-IPSLTTLGRVINCLCVEDRVYEAAGIIHR-MVQKGLVPEAV 708
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 252/510 (49%), Gaps = 16/510 (3%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ L V E +++ +M PN+ +Y +++GYC+ G ++ A + ++ G+
Sbjct: 190 LNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL 249
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ TY+ L+ G + +D++ A FK++ M + N A+ +L+ LC +
Sbjct: 250 DPDFFTYTSLIMGYCQRKDLDSA----FKVFNEMP-LKGCRRNEVAYTHLIHGLCVARRI 304
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+E + M + +I SLC S R A +V M + G+ P++ +Y +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ LC +A +LL + ++ G +P+ TY L+ G C +E A V++ M S+K
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
TR N ++ C N + + VL ML+ + PDV+T N++I+G C+ G + A +
Sbjct: 425 SPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+L+ ++ + PD T+T++I L R++EA + L+ + Q+G +P +V Y A++ G
Sbjct: 484 LLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD-LFDSLEQKGVNPNVVMYTALIDG 541
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV----WPS 416
+ +V+EA + ML + +S T+ +I GLC +L EA + +V P+
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 417 NIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAY 476
D +I L + G A +++ SG P+ Y I C+ +A
Sbjct: 602 VSTD----TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 477 QILREMRKNGLNPDAVTWRILDKLHGNRGN 506
++ +MR+NG++PD T+ L K +G+ G
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 241/495 (48%), Gaps = 8/495 (1%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C L V EA++ + G P+ +YT+LI GYC+ ++D A+KVF+EM G N
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE 288
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
+ Y+ L+ G+ R ++ A L+ +MK++E + L+ SLC +E
Sbjct: 289 VAYTHLIHGLCVARRIDEA----MDLFVKMKDDECFPTVRT-YTVLIKSLCGSERKSEAL 343
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+ ++M + +IDSLC + A ++ M ++GL P++++YN++++G
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
CK G A ++E P+ TY L++G C +S++ KA VL ML +K +
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDV 462
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
N + C N +L M PD T ++I+ CK R+EEA + D
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF-D 521
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
+ K P+ V +T +I G G++ EA +L+ + M + P +T+NA++ GL
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEA-HLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVY 424
+++EA + M+ IG+ +T I+I L + D A + ++ D + Y
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 425 AAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRK 484
I+ CR G++ +A + ++ ++GV+P++ Y+ +I G L A+ +L+ MR
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 485 NGLNPDAVTWRILDK 499
G P T+ L K
Sbjct: 701 TGCEPSQHTFLSLIK 715
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 228/474 (48%), Gaps = 8/474 (1%)
Query: 32 YTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLW 91
Y TL++ R G +D +V+ EM V PN TY+ +V G + +VE AN + K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 92 ERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCR 151
E L + + +L+ C+ ++ F++ +MP E A H+I LC
Sbjct: 246 E-----AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 152 SGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHT 211
+ R A + M+ P++ +Y ++ LC A L++E + G P+ HT
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 212 YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFML 271
Y VL++ LC + EKAR++L ML K + N + C + ++V+ M
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 272 QTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRI 331
+ P+ T N +I G+CK + +A+ VLN M+ K PD VT+ ++I G G
Sbjct: 421 SRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKV-LPDVVTYNSLIDGQCRSGNF 478
Query: 332 QEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI 391
A LL +M RG P TY +++ L + +RVEEA ++F+ + GV + Y
Sbjct: 479 DSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 392 VIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSG 451
+IDG C++ ++DEA + ++ + + ++ + A+I GLC GK+ EA ++V G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 452 VTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 505
+ P + ++I K AY ++M +G PDA T+ + + G
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 251/528 (47%), Gaps = 35/528 (6%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC + +A +L M +G +PNV++Y LI+GYC+ G ++ A V + M +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN+ TY+ L++G ++ +V +A ++ K+ ER + ++ N +L+D CR G
Sbjct: 425 SPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYN-----SLIDGQCRSGNF 478
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ +R+ M V +++ MIDSLC+S R A + + ++G+ P++V Y ++
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ G CK G A+ +LE+ + LP+ T+ L+ GLC + L++A + + M+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
I + L + + ML + +PD T T I +C+ GR+ +A
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
++ M +PD T++++I G ++G+ A ++L + M G P T+ ++++
Sbjct: 659 MMAKMRENGV-SPDLFTYSSLIKGYGDLGQTNFAFDVLKR-MRDTGCEPSQHTFLSLIKH 716
Query: 361 LFRLR------------------RVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQL 402
L ++ + E+ M+ V ++ +Y +I G+CE L
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 403 DEAKRFWDDI-----VWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIV 457
A++ +D + + PS + V+ A++ C+ K +EA + +++ G P +
Sbjct: 777 RVAEKVFDHMQRNEGISPSEL----VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE 832
Query: 458 CYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 505
V+I G K K + + + + G D + W+I+ G +G
Sbjct: 833 SCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG 880
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 232/516 (44%), Gaps = 27/516 (5%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+ LCG R EA L +M+ G PN+ +YT LI C + + A ++ +M G+
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+PN +TY+ L+ G + +E A V + +L E K LS N + L+ C+ V
Sbjct: 390 MPNVITYNALINGYCKRGMIEDA-VDVVELMESRK----LSPNTRTYNELIKGYCKSN-V 443
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
++ + M + K + + +ID CRSG A R++ +M RGL P +Y S+
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ LCK A L + Q G P+ Y L++G C +++A +L+ MLSK
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
+ + N + LC E + M++ QP V T +I+ K G + A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
M++ PDA T+TT I GR+ +A +++ + M + G SP + TY+++++G
Sbjct: 624 RFQQMLSSG-TKPDAHTYTTFIQTYCREGRLLDAEDMMAK-MRENGVSPDLFTYSSLIKG 681
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCE----------------SN--QL 402
L + A +V M G T+ +I L E SN +
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEF 741
Query: 403 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVH-FLYELVDSGVTPNIVCYNV 461
D + +V S + Y +I G+C G + A F + + G++P+ + +N
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 462 VIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
++ CKL EA +++ +M G P + ++L
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 201/452 (44%), Gaps = 43/452 (9%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC R+ EA LF MK P V +YT LI C + A + EM G+ PN
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
TY+VL+ + E+A L+ ++ E+ L N + L++ C+ G + +
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEK-----GLMPNVITYNALINGYCKRGMIEDA 412
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ E M K +I C+S H A V+ M +R + P +V+YNS++ G
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
C+ G AY+LL G +P + TY +++ LC +E+A
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA--------------- 516
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
C+++ + Q P+V+ +I+G+CK G+++EA +L
Sbjct: 517 ---CDLFDS-----------------LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
M++ K C P+++TF +I GL G+++EA LL + M + G P + T ++ L +
Sbjct: 557 KMLS-KNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+ A F ML G D+ TY I C +L +A+ + D +
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPN 455
Y+++IKG G+ + A L + D+G P+
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 217/488 (44%), Gaps = 67/488 (13%)
Query: 75 LRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRI-------- 126
L + D++ L F W SV ++A+L+ L GYV VF+I
Sbjct: 96 LFSLDLDPKTALNFSHWISQNPRYKHSV--YSYASLLTLLINNGYVGVVFKIRLLMIKSC 153
Query: 127 --------AEDMPQGKSVNEEFACGH---------MIDSLCRSGRNHGASRVVYVMRKRG 169
D+ + + +E F + +++SL R G +V M +
Sbjct: 154 DSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDK 213
Query: 170 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 229
+ P++ +YN +V+G CK G A Q + + ++ G P TY L+ G C DL+ A
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 230 KVLQFMLSK-------------------KDVDRT----------------RICNIYLRAL 254
KV M K + +D R + +++L
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 255 CLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPD 314
C + +E LN++ M +T +P++ T +I+ C + E+A ++L M+ K P+
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGLMPN 392
Query: 315 AVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVF 374
+T+ +I G G I++A++++ ++M R SP TYN +++G + V +A V
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVL 450
Query: 375 NCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRS 434
N ML V+ D TY +IDG C S D A R + + D + Y +MI LC+S
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 435 GKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW 494
++ EA L GV PN+V Y +IDG CK EA+ +L +M P+++T+
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 495 RILDKLHG 502
L +HG
Sbjct: 571 NAL--IHG 576
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 255/505 (50%), Gaps = 9/505 (1%)
Query: 4 LCGLSRVGEAHKL--FFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVL 61
L L R E K FD+ +G P+V +TT I+ +C+ G+++ A K+F +M GV
Sbjct: 246 LTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA 305
Query: 62 PNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVN 121
PN +T++ ++ G+ + A + K+ ER E ++ ++ LV L R +
Sbjct: 306 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT-----YSILVKGLTRAKRIG 360
Query: 122 EVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIV 181
+ + + ++M + ++IDS +G + A + +M +GL+ + +YN+++
Sbjct: 361 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 420
Query: 182 HGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDV 241
G CK+G A +LL+E + G+ ++ ++ ++ LC + A + + ML +
Sbjct: 421 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 480
Query: 242 DRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKV 301
+ + LC ++ L + L D T N +++G C+ G+++EA ++
Sbjct: 481 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 540
Query: 302 LNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGL 361
+++ G+ C D V++ T+I G ++ EA L + M +RG P TY+ ++ GL
Sbjct: 541 QKEIL-GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE-MVKRGLKPDNYTYSILICGL 598
Query: 362 FRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDN 421
F + +VEEA + ++ G++ D TY+++IDG C++ + +E + F+D+++ + +
Sbjct: 599 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 658
Query: 422 YVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILRE 481
VY +I+ CRSG++ A+ ++ G++PN Y +I G +S EA + E
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 482 MRKNGLNPDAVTWRILDKLHGNRGN 506
MR GL P+ + L +G G
Sbjct: 719 MRMEGLEPNVFHYTALIDGYGKLGQ 743
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 240/507 (47%), Gaps = 9/507 (1%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ C +V EA KLF M+ G PNVV++ T+I G G D A+ ++M G+
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P +TYS+LV+G+ R + + A F L E K+ N + NL+DS G +
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDA---YFVLKEMTKK--GFPPNVIVYNNLIDSFIEAGSL 394
Query: 121 NEVFRIAEDM-PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 179
N+ I + M +G S+ +I C++G+ A R++ M G + S+ S
Sbjct: 395 NKAIEIKDLMVSKGLSLTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 180 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 239
++ LC H A + + E + P L+ GLC KA ++ L+K
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 240 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 299
V TR N L LC E + +L C D ++ NT+I+G C +++EA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
L++MV + PD T++ +I GL N+ +++EA+ + + G P + TY+ ++
Sbjct: 574 MFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQF-WDDCKRNGMLPDVYTYSVMID 631
Query: 360 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
G + R EE +E F+ M+ V ++ Y +I C S +L A +D+
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 479
++ Y ++IKG+ ++ EA E+ G+ PN+ Y +IDG KL + +L
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 480 REMRKNGLNPDAVTWRILDKLHGNRGN 506
REM ++P+ +T+ ++ + GN
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGN 778
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 203/468 (43%), Gaps = 44/468 (9%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
R+G+A+ + +M +G PNV+ Y LI + G ++ A ++ D M G+ S TY+
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 69 VLVRGVLRTRDVERA------------NV---------------LMFKLWERMKEE---E 98
L++G + + A NV LMF R E
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 99 DLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGA 158
++S L+ LC+ G ++ + V + ++ LC +G+ A
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 159 SRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEG 218
R+ + RG VSYN+++ G C A+ L+E ++ G P +TY +L+
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-- 595
Query: 219 LCGESDLEKARKVLQFMLSKKDVDRTRIC------NIYLRALCLIKNPTELLNVLVFMLQ 272
CG ++ K + +QF D R + ++ + C + E M+
Sbjct: 596 -CGLFNMNKVEEAIQFW---DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 651
Query: 273 TQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQ 332
QP+ + N +I +C+ GR+ AL++ DM K +P++ T+T++I G+ + R++
Sbjct: 652 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDM-KHKGISPNSATYTSLIKGMSIISRVE 710
Query: 333 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 392
EA LL++ M G P + Y A++ G +L ++ + + + M V + TY ++
Sbjct: 711 EA-KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 769
Query: 393 IDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEA 440
I G + EA R +++ + D+ Y I G + G + EA
Sbjct: 770 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 127/304 (41%), Gaps = 38/304 (12%)
Query: 186 KHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTR 245
K GC A + G PS+ T +L+ L ++ +K
Sbjct: 216 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQK------------------ 257
Query: 246 ICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDM 305
C +C PDV T IN FCK G++EEA+K+ + M
Sbjct: 258 -CCEAFDVVC-----------------KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 299
Query: 306 VAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLR 365
AP+ VTF T+I GL GR EA + + M +RG P ++TY+ +++GL R +
Sbjct: 300 EEAG-VAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAK 357
Query: 366 RVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYA 425
R+ +A V M G + Y +ID E+ L++A D +V + Y
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 426 AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKN 485
+IKG C++G+ A L E++ G N + VI C M A + + EM
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 486 GLNP 489
++P
Sbjct: 478 NMSP 481
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 15/218 (6%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D C R E + F +M S+ PN V Y LI YCR+G + +A ++ ++M+H G+
Sbjct: 630 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 689
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PNS TY+ L++G+ VE A +L +E M+ E L N + L+D + G +
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLL----FEEMRME-GLEPNVFHYTALIDGYGKLGQM 744
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+V + +M + MI R G ASR++ MR++G+ P ++Y
Sbjct: 745 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 804
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEG 218
++G K GG + A++ E Y ++EG
Sbjct: 805 IYGYLKQGGVLEAFK----------GSDEENYAAIIEG 832
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 243/488 (49%), Gaps = 7/488 (1%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + +A ++ M G +P+ ++Y +++HGYC +G+ A +MR GV P+
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TYS+L+ + + A K+++ M + L + L+ +G + E+
Sbjct: 301 VVTYSLLMDYLCKNGRCMEAR----KIFDSMTKR-GLKPEITTYGTLLQGYATKGALVEM 355
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ + M + + + +I + + G+ A V MR++GL P+ V+Y +++
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGI 415
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LCK G A E+ I G P Y L+ GLC + E+A +++ ML +
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
T N + + C E + M++ +P+VIT NT+ING+C G+++EA+K+L+
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
MV+ P+ VT++T+I G + R+++AL +L++ M G SP I+TYN +L+GLF+
Sbjct: 536 GMVSVGL-KPNTVTYSTLINGYCKISRMEDAL-VLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
RR AKE++ + G + +TY I++ GLC++ D+A + + ++ +
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
+ MI L + G+ EA +G+ PN Y ++ + + E Q+ M
Sbjct: 654 FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713
Query: 484 KNGLNPDA 491
NG D+
Sbjct: 714 DNGCTVDS 721
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 237/502 (47%), Gaps = 47/502 (9%)
Query: 4 LCGLSRVGEAHKLFF---DMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
LC +R EA +L D + G P+VVSYTT+I+G+ + G+ D AY + EM G+
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI 227
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
LP+ +TY+ ++ + + + +++A ++ + + + ++ N+ ++ C G
Sbjct: 228 LPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS-----ILHGYCSSGQP 282
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
E + M + ++D LC++GR A ++ M KRGL P + +Y ++
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ G G + + LL+ ++ G P + + +L+ C + K KV Q ML
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI---CAYA---KQGKVDQAML---- 392
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
V M Q P+ +T VI CK GR+E+A+
Sbjct: 393 -------------------------VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
M+ + +P + + ++I GL + + A L+ + M RG + +N+++
Sbjct: 428 YFEQMI-DEGLSPGNIVYNSLIHGLCTCNKWERAEELILE-MLDRGICLNTIFFNSIIDS 485
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
+ RV E++++F M+ IGV + TY +I+G C + ++DEA + +V +
Sbjct: 486 HCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPN 545
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
Y+ +I G C+ ++ +A+ E+ SGV+P+I+ YN+++ G + A ++
Sbjct: 546 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605
Query: 481 EMRKNGLNPDAVTWRILDKLHG 502
+ ++G + T+ I+ LHG
Sbjct: 606 RITESGTQIELSTYNII--LHG 625
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 224/493 (45%), Gaps = 15/493 (3%)
Query: 12 EAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCG---VLPNSLTYS 68
+A +F ++ RG ++ + R A ++ M G V P+ TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTYG 91
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIA- 127
+L+ R R ++ L +K+ V+ AF L+ LC + ++ I
Sbjct: 92 ILIGCCCRA---GRLDLGFAALGNVIKK--GFRVDAIAFTPLLKGLCADKRTSDAMDIVL 146
Query: 128 EDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVM---RKRGLTPSLVSYNSIVHGL 184
M + + F+ ++ LC R+ A ++++M R G P +VSY ++++G
Sbjct: 147 RRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGF 206
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
K G +AY E + G LP TY ++ LC ++KA +VL M+ +
Sbjct: 207 FKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 266
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
N L C P E + L M +PDV+T + +++ CK GR EA K+ +
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M + P+ T+ T++ G G + E LL +M + G P ++ ++ +
Sbjct: 327 MTK-RGLKPEITTYGTLLQGYATKGALVEMHGLL-DLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVY 424
+V++A VF+ M G+ ++ TY VI LC+S ++++A +++ ++ N VY
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 425 AAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRK 484
++I GLC K A + E++D G+ N + +N +ID CK E+ ++ M +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 485 NGLNPDAVTWRIL 497
G+ P+ +T+ L
Sbjct: 505 IGVKPNVITYNTL 517
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 216/470 (45%), Gaps = 56/470 (11%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
MD LC R EA K+F M RG P + +Y TL+ GY G + + + D M G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ +S+L+ + V++A ++ K+ ++ L+ N + ++ LC+ G V
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKM-----RQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 121 NEVFRIAEDMPQGKSVNEEFACGH-----MIDSLCRSGRNHGASRVVYVMRKRGLTPSLV 175
+ E M ++E + G+ +I LC + A ++ M RG+ + +
Sbjct: 423 EDAMLYFEQM-----IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 176 SYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 235
+NSI+ CK G + + +L E ++ G P+ TY L+ G C +++A K+L M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 236 LSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRI 295
+S +P+ +T +T+ING+CK+ R+
Sbjct: 538 VS-----------------------------------VGLKPNTVTYSTLINGYCKISRM 562
Query: 296 EEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYN 355
E+AL + +M + +PD +T+ I+ GL R A LY + + G + TYN
Sbjct: 563 EDALVLFKEMESSGV-SPDIITYNIILQGLFQTRRTAAAKE-LYVRITESGTQIELSTYN 620
Query: 356 AVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWP 415
+L GL + + ++A ++F + + + ++ T+ I+ID L + + DEAK + + +
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF--VAFS 678
Query: 416 SN--IHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 463
SN + + + Y M + + G + E + D+G T + N ++
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 197/433 (45%), Gaps = 7/433 (1%)
Query: 77 TRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSV 136
RD A V + R +E ++ + + L+ CR G ++ F ++ +
Sbjct: 61 ARDSPAAAVSRYNRMARAGADE-VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFR 119
Query: 137 NEEFACGHMIDSLCRSGRNHGASRVVYV-MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQ 195
+ A ++ LC R A +V M + G P++ SYN ++ GLC A +
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE 179
Query: 196 LLE---EGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLR 252
LL + G P +Y ++ G E D +KA ML + + N +
Sbjct: 180 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIA 239
Query: 253 ALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA 312
ALC + + + VL M++ PD +T N++++G+C G+ +EA+ L M +
Sbjct: 240 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGV-E 298
Query: 313 PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKE 372
PD VT++ ++ L GR EA + + M +RG P I TY +L+G + E
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKI-FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 373 VFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLC 432
+ + M+ G+ D ++I+I + ++D+A + + + Y A+I LC
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 433 RSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAV 492
+SG++ +A+ + +++D G++P + YN +I G C + A +++ EM G+ + +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 493 TWRILDKLHGNRG 505
+ + H G
Sbjct: 478 FFNSIIDSHCKEG 490
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 239/487 (49%), Gaps = 7/487 (1%)
Query: 20 MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD 79
M+ +G N+ + + +I+ +CR ++ +A+ ++ G PN++T+S L+ G+
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 80 VERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 139
V A L+ ++ E + + +++N LV+ LC G E + + M +
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINT-----LVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228
Query: 140 FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE 199
G +++ +C+SG+ A ++ M +R + V Y+ I+ GLCKHG A+ L E
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 200 GIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKN 259
G + TY +L+ G C + K+L+ M+ +K ++ + +
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 260 PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFT 319
E + M+ PD IT ++I+GFCK +++A +++ D++ K C P+ TF
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFN 407
Query: 320 TIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLG 379
+I G RI + L L ++ M RG VTYN +++G L ++ AKE+F M+
Sbjct: 408 ILINGYCKANRIDDGLEL-FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 380 IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHE 439
V + TY I++DGLC++ + ++A ++ I D +Y +I G+C + K+ +
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 440 AVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 499
A L GV P + YN++I G CK EA + R+M ++G PD T+ IL +
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Query: 500 LHGNRGN 506
H G+
Sbjct: 587 AHLGDGD 593
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 239/505 (47%), Gaps = 43/505 (8%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC RV EA +L M GH P++++ TL++G C +G+ A + D+M G
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN++TY ++ + ++ A L+ K+ EE ++ ++ ++ ++D LC+ G +
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKM-----EERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ F + +M +I C +GR ++++ M KR + P++V+++ +
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ K G A +L +E I G P TY L++G C E+ L+KA +++ M+SK
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK-- 397
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
C P++ T N +ING+CK RI++ L+
Sbjct: 398 ---------------------------------GCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ M A D VT+ T+I G +G++ A L+Q M R P IVTY +L G
Sbjct: 425 LFRKMSLRGVVA-DTVTYNTLIQGFCELGKLNVAKE-LFQEMVSRKVPPNIVTYKILLDG 482
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
L E+A E+F + + D Y I+I G+C ++++D+A + +
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
Y MI GLC+ G + EA ++ + G P+ YN++I ++ +++
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 481 EMRKNGLNPDAVTWR-ILDKLHGNR 504
E+++ G + DA T + ++D L R
Sbjct: 603 ELKRCGFSVDASTIKMVIDMLSDGR 627
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 294 RIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVT 353
+ ++A+ + DM+ + P + F+ + + + L L Q M +G + + T
Sbjct: 68 KADDAIDLFRDMIHSR-PLPTVIDFSRLFSAIAKTKQYDLVLALCKQ-MELKGIAHNLYT 125
Query: 354 YNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV 413
+ ++ R R++ A ++ +G ++ T++ +I+GLC ++ EA D +V
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 414 WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKR 473
+ D ++ GLC SGK EA+ + ++V+ G PN V Y V++ CK
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 474 EAYQILREMRKNGLNPDAVTWR-ILDKL--HGNRGNDFGL 510
A ++LR+M + + DAV + I+D L HG+ N F L
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 240/490 (48%), Gaps = 8/490 (1%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
++ +A LF DM P++V ++ L+ + + D+ + ++M++ G+ N TYS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+ + R + A ++ K+ + +++N+ L++ C ++E + +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS-----LLNGFCHGNRISEAVALVD 169
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M + + ++ L + + A +V M +G P LV+Y ++++GLCK G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 189 GCMRAYQLLEEGIQFGYLPSEHT-YKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRIC 247
A LL + ++ G + ++ Y +++GLC ++ A + M +K
Sbjct: 230 EPDLALNLLNK-MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 248 NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA 307
N + LC ++ +L ML+ PD++ N +I+ F K G++ EA K+ ++MV
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 308 GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRV 367
K C PD V + T+I G R++E + + ++ M QRG VTY ++ G F+ R
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEV-FREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 368 EEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAM 427
+ A+ VF M+ GV D TY I++DGLC + ++ A ++ + D Y M
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 428 IKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 487
I+ LC++GK+ + L GV PN+V Y ++ G C+ +K EA + EM+++G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 488 NPDAVTWRIL 497
P++ T+ L
Sbjct: 528 LPNSGTYNTL 537
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 227/511 (44%), Gaps = 54/511 (10%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ C S++ A + M G+ P++V+ +L++G+C + A + D+M G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKE---EEDLSVNNAAFANLVDSLCRE 117
P+++T++ LV G+ + A L+ ERM + DL + +++ LC+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALV----ERMVVKGCQPDL----VTYGAVINGLCKR 228
Query: 118 GYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSY 177
G + + M +GK + +ID LC+ A + M +G+ P + +Y
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 178 NSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 237
N ++ LC +G A +LL + ++ P + L++ E L +A K+ M+
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 238 KKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEE 297
K C PDV+ NT+I GFCK R+EE
Sbjct: 349 SK----------------------------------HCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 298 ALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAV 357
++V +M + + + VT+TT+I G A ++++ M G P I+TYN +
Sbjct: 375 GMEVFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNA-QMVFKQMVSDGVHPDIMTYNIL 432
Query: 358 LRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS- 416
L GL VE A VF M + D TY +I+ LC++ ++++ WD S
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG---WDLFCSLSL 489
Query: 417 -NIHDNYV-YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKRE 474
+ N V Y M+ G CR G EA E+ + G PN YN +I + +
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 475 AYQILREMRKNGLNPDAVTWRIL-DKLHGNR 504
+ ++++EMR G DA T+ ++ + LH R
Sbjct: 550 SAELIKEMRSCGFAGDASTFGLVTNMLHDGR 580
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 6/225 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C RV E ++F +M RG V N V+YTTLIHG+ + + D A VF +M GV P+
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TY++L+ G+ +VE A V ++E M ++ D+ ++ + ++++LC+ G V +
Sbjct: 426 IMTYNILLDGLCNNGNVETALV----VFEYM-QKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ + + M+ CR G A + M++ G P+ +YN+++
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKA 228
+ G + +L++E G+ T+ LV + + L+K+
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKS 584
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 239/497 (48%), Gaps = 42/497 (8%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC RV EA +L M GH P +++ TL++G C G++ A + D M G
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +TY ++ + ++ A L+ K+ EE ++ ++ ++ ++D LC++G +
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKM-----EERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ F + +M + +I C +GR ++++ M KR ++P++V+++ +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ K G A QLL+E +Q G P+ TY L++G C E+ LE+A +++ M+SK
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK-- 397
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
C PD++T N +ING+CK RI++ L+
Sbjct: 398 ---------------------------------GCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ +M A + VT+ T++ G G+++ A L+Q M R P IV+Y +L G
Sbjct: 425 LFREMSLRGVIA-NTVTYNTLVQGFCQSGKLEVA-KKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
L +E+A E+F + + D Y I+I G+C ++++D+A + + D
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
Y MI LCR + +A ++ + G P+ + YN++I A +++
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 481 EMRKNGLNPDAVTWRIL 497
EM+ +G D T +++
Sbjct: 603 EMKSSGFPADVSTVKMV 619
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 241/482 (50%), Gaps = 7/482 (1%)
Query: 20 MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD 79
M+S+G ++ + + +I+ +CR ++ A+ ++ G P+++ ++ L+ G+
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 80 VERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 139
V A L+ ++ E + +++N LV+ LC G V++ + + M + E
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNT-----LVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 140 FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE 199
G +++ +C+SG+ A ++ M +R + V Y+ I+ GLCK G A+ L E
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 200 GIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKN 259
G+ TY L+ G C + K+L+ M+ +K ++ + +
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 260 PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFT 319
E +L M+Q P+ IT N++I+GFCK R+EEA++++ D++ K C PD +TF
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFN 407
Query: 320 TIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLG 379
+I G RI + L L ++ M RG VTYN +++G + ++E AK++F M+
Sbjct: 408 ILINGYCKANRIDDGLEL-FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 380 IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHE 439
V D +Y I++DGLC++ +L++A + I D +Y +I G+C + K+ +
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 440 AVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 499
A L GV + YN++I C+ +A + R+M + G PD +T+ IL +
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 500 LH 501
H
Sbjct: 587 AH 588
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 235/494 (47%), Gaps = 44/494 (8%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
+ +A LF DM +P V+ + L +T + ++ + +M G+ + T S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+++ R R + A M K+ ++ E D + F L++ LC E V+E + +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIM-KLGYEPDTVI----FNTLLNGLCLECRVSEALELVD 182
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M + +++ LC +G+ A ++ M + G P+ V+Y +++ +CK G
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
A +LL + + Y ++++GLC + L+ A
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA-------------------- 282
Query: 249 IYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAG 308
N+ M + D+IT NT+I GFC GR ++ K+L DM+
Sbjct: 283 ---------------FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 309 KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVE 368
K +P+ VTF+ +I + G+++EA LL ++M QRG +P +TYN+++ G + R+E
Sbjct: 328 KI-SPNVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLE 385
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMI 428
EA ++ + M+ G D T+ I+I+G C++N++D+ + ++ I + Y ++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 429 KGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 488
+G C+SGK+ A E+V V P+IV Y +++DG C +A +I ++ K+ +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 489 PDAVTWRILDKLHG 502
D + I+ +HG
Sbjct: 506 LDIGIYMII--IHG 517
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 191/410 (46%), Gaps = 45/410 (10%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC + A LF +M+ +G ++++Y TLI G+C G D K+ +M +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +T+SVL+ ++ + A+ L+ ++ +R ++ N + +L+D C+E +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-----GIAPNTITYNSLIDGFCKENRL 384
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
E ++ + M + +I+ C++ R + M RG+ + V+YN++
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
V G C+ G A +L +E + P +YK+L++GLC +LEKA ++
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG------K 498
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
++++++ L++ ++M+ +I+G C ++++A
Sbjct: 499 IEKSKM----------------ELDIGIYMI-------------IIHGMCNASKVDDAWD 529
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ + K DA + +I L + +A ++L++ M + G++P +TYN ++R
Sbjct: 530 LFCSLPL-KGVKLDARAYNIMISELCRKDSLSKA-DILFRKMTEEGHAPDELTYNILIRA 587
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
A E+ M G AD +T +VI+ L S +LD K F D
Sbjct: 588 HLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELD--KSFLD 634
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 236/489 (48%), Gaps = 17/489 (3%)
Query: 11 GEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVL 70
G A +LF DM S G P+V YT +I C ++ A ++ M G N + Y+VL
Sbjct: 209 GLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVL 268
Query: 71 VRGVLRTRDVERANVLMFKLWERMKEEEDLSVNN-----AAFANLVDSLCREGYVNEVFR 125
+ G+ + + K+WE + ++DL+ + + LV LC+
Sbjct: 269 IDGLCKKQ----------KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 126 IAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLC 185
+ ++M + E A +++ L + G+ A +V + G++P+L YN+++ LC
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 186 KHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTR 245
K A L + + G P++ TY +L++ C L+ A L M+
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 246 ICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDM 305
N + C + + + M+ + +P V+T +++ G+C G+I +AL++ ++M
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 306 VAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLR 365
GK AP TFTT++ GL G I++A+ L+ M + P VTYN ++ G
Sbjct: 499 -TGKGIAPSIYTFTTLLSGLFRAGLIRDAVK-LFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 366 RVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYA 425
+ +A E M G+V D+ +Y +I GLC + Q EAK F D + + + Y
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 426 AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKN 485
++ G CR GK+ EA+ E+V GV ++VCY V+IDG+ K ++ + +L+EM
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 486 GLNPDAVTW 494
GL PD V +
Sbjct: 677 GLKPDDVIY 685
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 237/532 (44%), Gaps = 46/532 (8%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC + EA LF M G PN V+Y+ LI +CR G++D A EM G+
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+ Y+ L+ G + D+ A M ++ + L + +L+ C +G +
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINK-----KLEPTVVTYTSLMGGYCSKGKI 488
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
N+ R+ +M + ++ L R+G A ++ M + + P+ V+YN +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLC-------------------- 220
+ G C+ G +A++ L+E + G +P ++Y+ L+ GLC
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 221 ---------------GESDLEKARKVLQFMLSKKDVDRTRIC-NIYLRALCLIKNPTELL 264
E LE+A V Q M+ ++ VD +C + + K+
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMV-QRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 265 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 324
+L M +PD + ++I+ K G +EA + D++ + C P+ VT+T +I G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW-DLMINEGCVPNEVTYTAVING 726
Query: 325 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLR-RVEEAKEVFNCMLGIGVV 383
L G + EA L ++ P P VTY L L + +++A E+ N +L G++
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLL 784
Query: 384 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 443
A++ TY ++I G C +++EA ++ D Y MI LCR + +A+
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 444 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR 495
+ + G+ P+ V YN +I G C +A ++ EM + GL P+ T R
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/601 (23%), Positives = 249/601 (41%), Gaps = 102/601 (16%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC +V EA + D+ + P+VV+Y TL++G C+ E ++ ++ DEM
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF 328
Query: 61 LPNSLTYSVLVRGVLRTRDVERA-------------------NVLMFKLWERMKEEE--- 98
P+ S LV G+ + +E A N L+ L + K E
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388
Query: 99 --------DLSVNNAAFANLVDSLCREGYVNEVFRIAEDM----------PQGKSVNEEF 140
L N+ ++ L+D CR G ++ +M P +N
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 141 ACG-------------------------HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLV 175
G ++ C G+ + A R+ + M +G+ PS+
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 176 SYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 235
++ +++ GL + G A +L E ++ P+ TY V++EG C E D+ KA + L+ M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 236 LSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRI 295
K V T + LCL +E + + + C+ + I +++GFC+ G++
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 296 EEALKVLNDMVA----------------------------------GKFCAPDAVTFTTI 321
EEAL V +MV + PD V +T++
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 322 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG 381
I G +EA ++ +M G P VTY AV+ GL + V EA+ + + M +
Sbjct: 689 IDAKSKTGDFKEAFG-IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 382 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 441
V + TY +D L + + + + + + Y +I+G CR G+I EA
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 442 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 501
+ ++ GV+P+ + Y +I+ C+ + ++A ++ M + G+ PD V + L +H
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL--IH 865
Query: 502 G 502
G
Sbjct: 866 G 866
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 174/335 (51%), Gaps = 4/335 (1%)
Query: 164 VMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGES 223
++ K L P + + ++++HGL K A +L + + G P + Y ++ LC
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241
Query: 224 DLEKARKVLQFMLSKK-DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITL 282
DL +A++++ M + DV+ N+ + LC + E + + + +PDV+T
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPY-NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTY 300
Query: 283 NTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVM 342
T++ G CK+ E L+++++M+ +F +P ++++ GL G+I+EALNL+ +V+
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRF-SPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 343 PQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQL 402
G SP + YNA++ L + R+ EA+ +F+ M IG+ + TY+I+ID C +L
Sbjct: 360 -DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 403 DEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVV 462
D A F ++V Y Y ++I G C+ G I A F+ E+++ + P +V Y +
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 463 IDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
+ G C +A ++ EM G+ P T+ L
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%)
Query: 330 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 389
R+ + + + ++ + P + T +A+L GL + R A E+FN M+ +G+ D Y
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 390 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 449
VI LCE L AK + + Y +I GLC+ K+ EAV +L
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 450 SGVTPNIVCYNVVIDGACKLSMKREAYQILREM 482
+ P++V Y ++ G CK+ +++ EM
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 354 YNAVLRGLFRLRRVEEAKEVFNCMLG-IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDI 412
++ +++ R RRV + VF M+ + ++ + T + ++ GL + A ++D+
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 413 VWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMK 472
V D Y+Y +I+ LC + A + + +G NIV YNV+IDG CK
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 473 REAYQILREMRKNGLNPDAVTW 494
EA I +++ L PD VT+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTY 300
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 240/507 (47%), Gaps = 27/507 (5%)
Query: 7 LSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLT 66
+ +V EA K+F +MK + PN+ +Y LI CR G++D A+++ D M+ G+ PN T
Sbjct: 356 MGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 67 YSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSV---NNAAFANLVDSLCREGYVNEV 123
+++V + +++ ++ A + EE D V + F +L+D L + G V++
Sbjct: 415 VNIMVDRLCKSQKLDEACAMF--------EEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+++ E M +I + GR ++ M + +P L N+ +
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
+ K G + + EE ++P +Y +L+ GL + ++ M + V
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
TR NI + C + +L M +P V+T +VI+G K+ R++EA +
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+ K + V ++++I G VGRI EA +L ++M Q+G +P + T+N++L L +
Sbjct: 647 E-AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM-QKGLTPNLYTWNSLLDALVK 704
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDI----VWPSNIH 419
+ EA F M + + TY I+I+GLC+ + ++A FW ++ + PS I
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 479
Y MI GL ++G I EA +G P+ CYN +I+G + +A+ +
Sbjct: 765 ----YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 480 REMRKNGL---NPDAVTWRILDKLHGN 503
E R+ GL N V +LD LH N
Sbjct: 821 EETRRRGLPIHNKTCVV--LLDTLHKN 845
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 231/490 (47%), Gaps = 8/490 (1%)
Query: 16 LFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVL 75
LF M+ G+ P V +TTLI G+ + G +D A + DEM+ + + + Y+V +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 76 RTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKS 135
+ V+ A +K + + E L + + +++ LC+ ++E + E + + +
Sbjct: 250 KVGKVDMA----WKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 136 VNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQ 195
V +A MI +G+ A ++ R +G PS+++YN I+ L K G A +
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 196 LLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALC 255
+ EE ++ P+ TY +L++ LC L+ A ++ M R NI + LC
Sbjct: 365 VFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 256 LIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 315
+ E + M C PD IT ++I+G K+GR+++A KV M+ C ++
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD-CRTNS 482
Query: 316 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 375
+ +T++I N GR ++ + +Y+ M + SP + N + +F+ E+ + +F
Sbjct: 483 IVYTSLIKNFFNHGRKEDG-HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 376 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSG 435
+ V D+ +Y+I+I GL ++ +E + + + D Y +I G C+ G
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 436 KIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR 495
K+++A L E+ G P +V Y VIDG K+ EAY + E + + + V +
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 496 ILDKLHGNRG 505
L G G
Sbjct: 662 SLIDGFGKVG 671
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 241/503 (47%), Gaps = 8/503 (1%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC +R+ EA ++F ++ VP +Y T+I GY G+ D AY + + R G +P+
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ Y+ ++ + + V+ A K++E MK+ D + N + + L+D LCR G ++
Sbjct: 343 VIAYNCILTCLRKMGKVDEA----LKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
F + + M + M+D LC+S + A + M + TP +++ S++ G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
L K G AY++ E+ + + Y L++ E K+ + M+++
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
++ N Y+ + P + + + + PD + + +I+G K G E ++
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
M + C D + +I G G++ +A LL + M +G+ P +VTY +V+ GL +
Sbjct: 577 SM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE-MKTKGFEPTVVTYGSVIDGLAK 634
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+ R++EA +F + + Y+ +IDG + ++DEA ++++ + Y
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
+ +++ L ++ +I+EA+ + + TPN V Y ++I+G CK+ +A+ +EM+
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 484 KNGLNPDAVTWRILDKLHGNRGN 506
K G+ P +++ + GN
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGN 777
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 239/503 (47%), Gaps = 20/503 (3%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D + +V A K F ++++ G P+ V+YT++I C+ +D A ++F+ +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+P + Y+ ++ G + A + L ER + + + + A+ ++ L + G V
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEA----YSLLERQRAKGSIP-SVIAYNCILTCLRKMGKV 359
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+E ++ E+M + + N +ID LCR+G+ A + M+K GL P++ + N +
Sbjct: 360 DEALKVFEEMKKDAAPNLS-TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
V LCK A + EE P E T+ L++GL ++ A KV + ML D
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML---D 475
Query: 241 VDRTRICNIYLRALCLIKN------PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGR 294
D +Y LIKN + + M+ C PD+ LNT ++ K G
Sbjct: 476 SDCRTNSIVYTS---LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 295 IEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTY 354
E+ + ++ A +F PDA +++ +I GL+ G E L Y M ++G Y
Sbjct: 533 PEKGRAMFEEIKARRF-VPDARSYSILIHGLIKAGFANETYELFYS-MKEQGCVLDTRAY 590
Query: 355 NAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVW 414
N V+ G + +V +A ++ M G TY VIDGL + ++LDEA +++
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 415 PSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKRE 474
+ +Y+++I G + G+I EA L EL+ G+TPN+ +N ++D K E
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 475 AYQILREMRKNGLNPDAVTWRIL 497
A + M++ P+ VT+ IL
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGIL 733
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 232/494 (46%), Gaps = 11/494 (2%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
RV A L +MKS ++V Y I + + G++D+A+K F E+ G+ P+ +TY+
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
++ + + ++ A V MF+ E+ + A+ ++ G +E + + E
Sbjct: 278 SMIGVLCKANRLDEA-VEMFEHLEKNRR----VPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
S+ A ++ L + G+ A +V M+K P+L +YN ++ LC+ G
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAG 391
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK-DVDRTRIC 247
A++L + + G P+ T ++V+ LC L++A + + M K D C
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 248 NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA 307
++ + L + + V ML + C+ + I ++I F GR E+ K+ DM+
Sbjct: 452 SL-IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI- 509
Query: 308 GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRV 367
+ C+PD T + + G ++ + ++ +R + P +Y+ ++ GL +
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR-FVPDARSYSILIHGLIKAGFA 568
Query: 368 EEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAM 427
E E+F M G V D+ Y IVIDG C+ ++++A + +++ Y ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 428 IKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 487
I GL + ++ EA E + N+V Y+ +IDG K+ EAY IL E+ + GL
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 488 NPDAVTWR-ILDKL 500
P+ TW +LD L
Sbjct: 689 TPNLYTWNSLLDAL 702
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 222/495 (44%), Gaps = 11/495 (2%)
Query: 8 SRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTY 67
+++ E + + M+ P +YTTLI + D+ +F +M+ G P +
Sbjct: 147 NKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLF 206
Query: 68 SVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIA 127
+ L+RG + V+ A L + MK L + + +DS + G V+ ++
Sbjct: 207 TTLIRGFAKEGRVDSA----LSLLDEMKSS-SLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 128 EDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKH 187
++ +E MI LC++ R A + + K P +YN+++ G
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 188 GGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD-VDRTRI 246
G AY LLE G +PS Y ++ L +++A KV + M KKD
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLST 379
Query: 247 CNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMV 306
NI + LC + M + P+V T+N +++ CK +++EA + +M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM- 438
Query: 307 AGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRR 366
K C PD +TF ++I GL VGR+ +A +Y+ M + Y ++++ F R
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYK-VYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 367 VEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAA 426
E+ +++ M+ D +D + ++ + ++ + +++I + D Y+
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 427 MIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNG 486
+I GL ++G +E Y + + G + YN+VIDG CK +AYQ+L EM+ G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 487 LNPDAVTW-RILDKL 500
P VT+ ++D L
Sbjct: 618 FEPTVVTYGSVIDGL 632
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D C +V +A++L +MK++G P VV+Y ++I G + +D AY +F+E + +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
N + YS L+ G + ++ A +++ +L ++ L+ N + +L+D+L + +
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-----GLTPNLYTWNSLLDALVKAEEI 708
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
NE + M + K + G +I+ LC+ + + A M+K+G+ PS +SY ++
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGL 219
+ GL K G A L + G +P Y ++EGL
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 120/226 (53%), Gaps = 8/226 (3%)
Query: 6 GLSRVG---EAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLP 62
GL + G E ++LF+ MK +G V + +Y +I G+C+ G+++ AY++ +EM+ G P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 63 NSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNE 122
+TY ++ G+ + ++ A + L+E K + + +N +++L+D + G ++E
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEA----YMLFEEAKSKR-IELNVVIYSSLIDGFGKVGRIDE 675
Query: 123 VFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVH 182
+ I E++ Q + ++D+L ++ + A M++ TP+ V+Y +++
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 183 GLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKA 228
GLCK +A+ +E + G PS +Y ++ GL ++ +A
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 87/206 (42%), Gaps = 2/206 (0%)
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
++L +M F P T ++ G + +++E +++ Q+M + + P Y ++
Sbjct: 119 QILGEMSVAGF-GPSVNTCIEMVLGCVKANKLREGYDVV-QMMRKFKFRPAFSAYTTLIG 176
Query: 360 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
+ + +F M +G + +I G + ++D A D++ S
Sbjct: 177 AFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA 236
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 479
D +Y I + GK+ A F +E+ +G+ P+ V Y +I CK + EA ++
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 480 REMRKNGLNPDAVTWRILDKLHGNRG 505
+ KN P + + +G+ G
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAG 322
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 198 bits (503), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 240/505 (47%), Gaps = 43/505 (8%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC RV EA +L M GH P +++ L++G C G++ A + D M G
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +TY +++ + ++ A L+ K+ EE + ++ ++ ++D LC++G +
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKM-----EERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ F + +M + +I C +GR ++++ M KR +TP +V+++++
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ K G A +L +E IQ G P TY L++G C E+ L+KA +L M+SK
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-- 381
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
C P++ T N +ING+CK I++ L+
Sbjct: 382 ---------------------------------GCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ M A D VT+ T+I G +G+++ A L+Q M R P IV+Y +L G
Sbjct: 409 LFRKMSLRGVVA-DTVTYNTLIQGFCELGKLEVAKE-LFQEMVSRRVRPDIVSYKILLDG 466
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
L E+A E+F + + D Y I+I G+C ++++D+A + + D
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
Y MI GLC+ G + EA ++ + G +PN YN++I ++ +++
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
Query: 481 EMRKNGLNPDAVTWR-ILDKLHGNR 504
E+++ G + DA T + ++D L R
Sbjct: 587 EIKRCGFSVDASTVKMVVDMLSDGR 611
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 242/491 (49%), Gaps = 15/491 (3%)
Query: 20 MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD 79
M+ +G N+ + + +I+ CR ++ +A+ ++ G P+++T+S L+ G+
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 80 VERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 139
V A L+ ++ E M + L NA LV+ LC G V++ + + M + E
Sbjct: 158 VSEALELVDRMVE-MGHKPTLITLNA----LVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212
Query: 140 FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE 199
G ++ +C+SG+ A ++ M +R + V Y+ I+ GLCK G A+ L E
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272
Query: 200 GIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRAL--CLI 257
G+ Y L+ G C + K+L+ M+ +K + AL C +
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV----VAFSALIDCFV 328
Query: 258 KNPT--ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 315
K E + M+Q PD +T ++I+GFCK ++++A +L+ MV+ K C P+
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS-KGCGPNI 387
Query: 316 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 375
TF +I G I + L L ++ M RG VTYN +++G L ++E AKE+F
Sbjct: 388 RTFNILINGYCKANLIDDGLEL-FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 376 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSG 435
M+ V D +Y I++DGLC++ + ++A ++ I D +Y +I G+C +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 436 KIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR 495
K+ +A L GV P++ YN++I G CK EA + R+M ++G +P+ T+
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 496 ILDKLHGNRGN 506
IL + H G+
Sbjct: 567 ILIRAHLGEGD 577
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 185/391 (47%), Gaps = 2/391 (0%)
Query: 107 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 166
F+ L + R + V + + M + + MI+ CR + A + +
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 167 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 226
K G P V+++++++GLC G A +L++ ++ G+ P+ T LV GLC +
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 227 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 286
A ++ M+ L+ +C + +L M + + + D + + +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 287 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 346
+G CK G ++ A + N+M F A D + +TT+I G GR + LL M +R
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKA-DIIIYTTLIRGFCYAGRWDDGAKLLRD-MIKRK 312
Query: 347 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 406
+P +V ++A++ + ++ EA+E+ M+ G+ D+ TY +IDG C+ NQLD+A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 407 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 466
D +V + + +I G C++ I + + ++ GV + V YN +I G
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 467 CKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
C+L A ++ +EM + PD V+++IL
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 246/531 (46%), Gaps = 60/531 (11%)
Query: 4 LCGL---SRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
LCG ++G ++ M G P+ + +L+H YC +G+ AYK+ +M CG
Sbjct: 344 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403
Query: 61 LPNSLTYSVLVRGVLRTRD-----------------------VERANVLMFK--LWERMK 95
+P + Y++L+ + +D + + NV F L K
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 96 EEEDLSV-----------NNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGH 144
E+ SV + + ++ +++ LC + F + E+M +G V + +
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 145 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 204
M+DS C++G A + MR+ G TP++V+Y +++H K A +L E + G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 205 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 264
LP+ TY L++G C +EKA ++ + M KDV ++Y + + +E
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV---DMYFKQY---DDNSE-- 635
Query: 265 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 324
+P+V+T +++GFCK R+EEA K+L D ++ + C P+ + + +I G
Sbjct: 636 -----------RPNVVTYGALLDGFCKSHRVEEARKLL-DAMSMEGCEPNQIVYDALIDG 683
Query: 325 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 384
L VG++ EA + + M + G+ + TY++++ F+++R + A +V + ML
Sbjct: 684 LCKVGKLDEAQEVKTE-MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742
Query: 385 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 444
+ Y +IDGLC+ + DEA + + + Y AMI G GKI + L
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 445 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR 495
+ GV PN V Y V+ID CK A+ +L EM++ +R
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 233/502 (46%), Gaps = 37/502 (7%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC S++ A LF +MK G V +V +YT ++ +C+ G ++ A K F+EMR G
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +TY+ L+ L+ + V AN +L+E M E L N ++ L+D C+ G V
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYAN----ELFETMLSEGCLP-NIVTYSALIDGHCKAGQV 604
Query: 121 NEVFRIAEDMPQGKSV------------NEE----FACGHMIDSLCRSGRNHGASRVVYV 164
+ +I E M K V N E G ++D C+S R A +++
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 165 MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESD 224
M G P+ + Y++++ GLCK G A ++ E + G+ + +TY L++
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 225 LEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNT 284
+ A KVL ML I + LC + E ++ M + CQP+V+T
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 285 VINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQ 344
+I+GF +G+IE L++L M K AP+ VT+ +I G + A NLL + M Q
Sbjct: 785 MIDGFGMIGKIETCLELLERM-GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE-MKQ 842
Query: 345 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTT-----YAIVIDGLCES 399
+ Y V+ G + E E + IG D T Y ++ID L ++
Sbjct: 843 THWPTHTAGYRKVIEGFNK-----EFIESLGLLDEIG--QDDTAPFLSVYRLLIDNLIKA 895
Query: 400 NQLDEAKRFWDDIVWPSNIHDNY--VYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIV 457
+L+ A R +++ S +Y Y ++I+ LC + K+ A E+ GV P +
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
Query: 458 CYNVVIDGACKLSMKREAYQIL 479
+ +I G + S EA +L
Sbjct: 956 SFCSLIKGLFRNSKISEALLLL 977
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 240/552 (43%), Gaps = 70/552 (12%)
Query: 6 GLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSL 65
L +VG+ + +++ VP+ V YT LI G C + A + MR LPN +
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 66 TYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFR 125
TYS L+ G L + + R ++ M E + F +LV + C G + ++
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVL-----NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 126 IAEDMPQ--------------------------------GKSVNEEFACGHMIDS----- 148
+ + M + K+ +E A G +++
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 149 ----LCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 204
LC +G+ A V+ M +G P +Y+ +++ LC A+ L EE + G
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 205 YLPSEHTYKVLVEGLCGESDLEKARKVLQFM----LSKKDVDRTRICNIYLRALCLIKNP 260
+ +TY ++V+ C +E+ARK M + V T + + YL+A +
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYA 572
Query: 261 TELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA-------- 312
EL ML C P+++T + +I+G CK G++E+A ++ M K
Sbjct: 573 NELFET---MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 313 -------PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLR 365
P+ VT+ ++ G R++EA LL M G P + Y+A++ GL ++
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLL-DAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 366 RVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYA 425
+++EA+EV M G A TY+ +ID + + D A + ++ S + +Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 426 AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKN 485
MI GLC+ GK EA + + + G PN+V Y +IDG + ++L M
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 486 GLNPDAVTWRIL 497
G+ P+ VT+R+L
Sbjct: 809 GVAPNYVTYRVL 820
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/534 (24%), Positives = 231/534 (43%), Gaps = 64/534 (11%)
Query: 35 LIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRT----------RDVERAN 84
L+ +CR G +A + ++ P+ TY+ L++ L+ R++ AN
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 85 VLM--FKL------------WER---MKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIA 127
+ M F L W + E E+ + + L+ LC E
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
Query: 128 EDMPQGKSVN-----EEFACGHMIDSLCRSGRNHG-ASRVVYVMRKRGLTPSLVSYNSIV 181
M + CG C + + G RV+ +M G PS +NS+V
Sbjct: 326 NRMRATSCLPNVVTYSTLLCG------CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 182 HGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESD------LEKARKVLQFM 235
H C G AY+LL++ ++ G++P Y +L+ +CG+ D L+ A K M
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 236 LSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRI 295
L+ V + + R LC + +V+ M+ PD T + V+N C ++
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 296 EEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYN 355
E A + +M G A D T+T ++ G I++A + M + G +P +VTY
Sbjct: 500 ELAFLLFEEMKRGGLVA-DVYTYTIMVDSFCKAGLIEQARK-WFNEMREVGCTPNVVTYT 557
Query: 356 AVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWP 415
A++ + ++V A E+F ML G + + TY+ +IDG C++ Q+++A + ++ +
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 416 SNIHD---------------NYV-YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCY 459
++ D N V Y A++ G C+S ++ EA L + G PN + Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 460 NVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW-RILDKLHGNRGNDFGLRI 512
+ +IDG CK+ EA ++ EM ++G T+ ++D+ + D ++
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 197/477 (41%), Gaps = 56/477 (11%)
Query: 56 RHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLC 115
R G + Y+ LV ++R D + + ++ + KE F ++ L
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKE---------VFGEFLNVLV 207
Query: 116 REGYVNEVFRIA-EDMPQGKSVN-----EEFACGHMIDSLCRSGRNHGASRVVYVMRKRG 169
R+ N F IA E++ + K + C +I + ++ R AS + M
Sbjct: 208 RKHCRNGSFSIALEELGRLKDFRFRPSRSTYNC--LIQAFLKADRLDSASLIHREMSLAN 265
Query: 170 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 229
L + + LCK G A L+E ++P Y L+ GLC S E+A
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 230 KVLQFMLSKKDVDRTRIC--NI--YLRALCLIKNPTEL---LNVLVFMLQTQCQPDVITL 282
L M R C N+ Y LC N +L VL M+ C P
Sbjct: 323 DFLNRM-------RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 283 NTVINGFCKMGRIEEALKVLNDMVAGKFCA--PDAVTFTTIIFGLLNVGRI---QEALNL 337
N++++ +C G A K+L MV C P V + +I G I +++LN
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVK---CGHMPGYVVYNILI------GSICGDKDSLNC 426
Query: 338 LYQVMPQRGYS----PGIV----TYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 389
+ ++ YS G+V ++ R L + E+A V M+G G + D++TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 390 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 449
+ V++ LC +++++ A ++++ + D Y Y M+ C++G I +A + E+ +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 450 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 506
G TPN+V Y +I K A ++ M G P+ VT+ L H G
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 13/239 (5%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC + + EA+KL M+ +G PNVV+YT +I G+ G+++ ++ + M GV
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +TY VL+ + ++ A+ L E MK+ + A + +++ +E
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAH----NLLEEMKQTH-WPTHTAGYRKVIEGFNKE--F 863
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLV----S 176
E + +++ Q + +ID+L ++ R A R++ + + +LV +
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSST 921
Query: 177 YNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 235
YNS++ LC A+QL E + G +P ++ L++GL S + +A +L F+
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRH 57
++ LC ++V A +LF +M +G +P + S+ +LI G R ++ A + D + H
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 239/498 (47%), Gaps = 34/498 (6%)
Query: 27 PNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 86
P+V Y L+ + ++ ++ +M CG+ P + T+++L+R + + V+ A
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR-- 167
Query: 87 MFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMI 146
+L++ M E+ N F LV C+ G ++ + M + + ++
Sbjct: 168 --ELFDEMPEK-GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 147 DSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYL 206
S CR GRN + ++V MR+ GL P +V++NS + LCK G + A ++ + YL
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 207 ----PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTE 262
P+ TY ++++G C LE A+ + + + D+ + NI+L+ L E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 263 LLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTII 322
VL M P + + N +++G CK+G + +A ++ M C PDAVT+ ++
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLL 403
Query: 323 FGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGV 382
G +VG++ A +LL ++M + P T N +L L+++ R+ EA+E+ M G
Sbjct: 404 HGYCSVGKVDAAKSLLQEMM-RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 383 VADSTTYAIVIDGLCESNQLDEAKR----------------------FWDDIVWPSN-IH 419
D+ T I++DGLC S +LD+A DD + +N +
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 479
D Y+ ++ GLC++G+ EA + E++ + P+ V YN+ I CK A+++L
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 480 REMRKNGLNPDAVTWRIL 497
++M K G + T+ L
Sbjct: 583 KDMEKKGCHKSLETYNSL 600
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 234/524 (44%), Gaps = 40/524 (7%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC S V A +LF +M +G PN ++ L+ GYC+ G D ++ + M GVLPN
Sbjct: 157 LCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPN 216
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ Y+ +V R E N K+ E+M+EE L + F + + +LC+EG V +
Sbjct: 217 KVIYNTIVSSFCR----EGRNDDSEKMVEKMREE-GLVPDIVTFNSRISALCKEGKVLDA 271
Query: 124 FRIAEDM--------PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLV 175
RI DM P+ S+ M+ C+ G A + +R+ SL
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNL----MLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 176 SYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 235
SYN + GL +HG + A +L++ G PS ++Y +L++GLC L A+ ++ M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 236 LSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRI 295
L C + ++L M++ C P+ T N +++ KMGRI
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 296 EEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLL-------YQVMPQRGYS 348
EA ++L M + D VT I+ GL G + +A+ ++ + G S
Sbjct: 448 SEAEELLRKMNEKGY-GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 349 ---------------PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 393
P ++TY+ +L GL + R EAK +F M+G + DS Y I I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 394 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 453
C+ ++ A R D+ Y ++I GL +I E + E+ + G++
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 454 PNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
PNI YN I C+ +A +L EM + + P+ +++ L
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 241/516 (46%), Gaps = 40/516 (7%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
RV L+ DM G P ++ LI C + +D A ++FDEM G PN T+
Sbjct: 127 RVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFG 186
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+LVRG + ++ L+ + E + N + +V S CREG ++ ++ E
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAM-----ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVE 241
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKR---GLT-PSLVSYNSIVHGL 184
M + V + I +LC+ G+ ASR+ M GL P+ ++YN ++ G
Sbjct: 242 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 301
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
CK G A L E + L S +Y + ++GL +A VL+ M K
Sbjct: 302 CKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSI 361
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
NI + LC + ++ ++ M + PD +T +++G+C +G+++ A +L +
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M+ C P+A T ++ L +GRI EA LL + M ++GY VT N ++ GL
Sbjct: 422 MMRNN-CLPNAYTCNILLHSLWKMGRISEAEELLRK-MNEKGYGLDTVTCNIIVDGLCGS 479
Query: 365 RRVEEAKEVFNCM----------LG---IGVVADS----------TTYAIVIDGLCESNQ 401
+++A E+ M LG IG+V DS TY+ +++GLC++ +
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 402 LDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNV 461
EAK + +++ D+ Y I C+ GKI A L ++ G ++ YN
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 462 VIDGACKLSMKREAYQI---LREMRKNGLNPDAVTW 494
+I G L +K + ++I + EM++ G++P+ T+
Sbjct: 600 LILG---LGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/569 (23%), Positives = 252/569 (44%), Gaps = 72/569 (12%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+ C R ++ K+ M+ G VP++V++ + I C+ G++ A ++F +M
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 61 L----PNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCR 116
L PNS+TY+++++G + +E A L +E ++E +DL+ + ++ + L R
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTL----FESIRENDDLA-SLQSYNIWLQGLVR 338
Query: 117 EGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVS 176
G E + + M ++ ++D LC+ G A +V +M++ G+ P V+
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 177 YNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFML 236
Y ++HG C G A LL+E ++ LP+ +T +L+ L + +A ++L+ M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 237 SKKDVDRTRICNIYLRALCLIKNPTELLNVLVFM-----------------------LQT 273
K T CNI + LC + + ++ M ++
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 274 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 333
C PD+IT +T++NG CK GR EA + +M+ K PD+V + I G+I
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL-QPDSVAYNIFIHHFCKQGKISS 577
Query: 334 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 393
A +L + M ++G + TYN+++ GL ++ E + + M G+ + TY I
Sbjct: 578 AFRVL-KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Query: 394 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCR-------------------- 433
LCE ++++A D+++ + + + + +I+ C+
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQ 696
Query: 434 --------------SGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 479
+G++ +A L ++D G Y +++ CK A IL
Sbjct: 697 KEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGIL 756
Query: 480 REM--RKNGLNPDAVTWRILDKLHGNRGN 506
+M R G +P A+ ++D L G GN
Sbjct: 757 HKMIDRGYGFDPAALM-PVIDGL-GKMGN 783
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 190/436 (43%), Gaps = 31/436 (7%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
MD LC L + +A + MK G P+ V+Y L+HGYC G++D A + EM
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
LPN+ T ++L+ + + + A L+ K+ E+ + ++ N +VD LC G +
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN-----IIVDGLCGSGEL 482
Query: 121 NEVFRIAEDMP-----------------------QGKSVNEEFACGHMIDSLCRSGRNHG 157
++ I + M + + + +++ LC++GR
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 158 ASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVE 217
A + M L P V+YN +H CK G A+++L++ + G S TY L+
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 218 GLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQP 277
GL ++ + + ++ M K N ++ LC + + N+L M+Q P
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 278 DVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNL 337
+V + +I FCK+ + A +V V+ C ++ + LL G++ +A L
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVS--ICGQKEGLYSLMFNELLAAGQLLKATEL 720
Query: 338 LYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLC 397
L V+ RG+ G Y ++ L + +E A + + M+ G D VIDGL
Sbjct: 721 LEAVL-DRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLG 779
Query: 398 ESNQLDEAKRFWDDIV 413
+ EA F D ++
Sbjct: 780 KMGNKKEANSFADKMM 795
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 156/301 (51%), Gaps = 10/301 (3%)
Query: 207 PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV 266
PS + Y +L+E E +E + + M+ +T N+ +RALC +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 267 LVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLL 326
M + C+P+ T ++ G+CK G ++ L++LN M + P+ V + TI+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL-PNKVIYNTIVSSFC 228
Query: 327 NVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM-----LGIG 381
GR ++ ++ + M + G P IVT+N+ + L + +V +A +F+ M LG+
Sbjct: 229 REGRNDDSEKMV-EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL- 286
Query: 382 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 441
+S TY +++ G C+ L++AK ++ I ++ Y ++GL R GK EA
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 442 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 501
L ++ D G+ P+I YN+++DG CKL M +A I+ M++NG+ PDAVT+ L LH
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL--LH 404
Query: 502 G 502
G
Sbjct: 405 G 405
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 356 AVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAI-VIDGLCESNQLDEAKRFWDDIV- 413
+ R L R + EE +E+ N +L + + + V+ +SN +D+A + +
Sbjct: 44 TIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRS 103
Query: 414 -WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLY-ELVDSGVTPNIVCYNVVIDGACKLSM 471
+P N Y+Y +++ + ++ E V +LY ++V G+ P +N++I C S
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRV-EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSC 162
Query: 472 KREAYQILREMRKNGLNPDAVTWRILDKLHGNRG-NDFGLRI 512
A ++ EM + G P+ T+ IL + + G D GL +
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 238/492 (48%), Gaps = 7/492 (1%)
Query: 7 LSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLT 66
+ + G A + M RG NV ++ L+ G CR E A + EMR ++P+ +
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179
Query: 67 YSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRI 126
Y+ ++RG +++E+A +L MK S + + L+D+ C+ G ++E
Sbjct: 180 YNTVIRGFCEGKELEKA----LELANEMKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 127 AEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCK 186
++M + +I C G + + +RG +P ++YN+++ G CK
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 187 HGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRI 246
G A ++ E I+ G P+ +TY L++GLCG ++A ++L M+ K +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 247 CNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMV 306
NI + LC + + ++ M + + +PD IT N ++ G C G ++EA K+L M+
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 307 A-GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLR 365
+ PD +++ +I GL R+ +AL+ +Y ++ ++ + VT N +L +
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALD-IYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 366 RVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYA 425
V +A E++ + +V +S TY +IDG C++ L+ AK + + Y
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 426 AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKN 485
++ LC+ G + +A E+ P++V +N++IDG+ K + A +L M +
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 486 GLNPDAVTWRIL 497
GL+PD T+ L
Sbjct: 594 GLSPDLFTYSKL 605
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 218/483 (45%), Gaps = 10/483 (2%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D C ++ EA +MK G ++V YT+LI G+C GE+D +FDE+ G
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P ++TY+ L+RG + ++ A+ + + ER + N + L+D LC G
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIER-----GVRPNVYTYTGLIDGLCGVGKT 333
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
E ++ M + +I+ LC+ G A +V +M+KR P ++YN +
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYL--PSEHTYKVLVEGLCGESDLEKARKVLQFMLSK 238
+ GLC G A +LL ++ P +Y L+ GLC E+ L +A + ++ K
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 239 KDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEA 298
NI L + + + + + + ++ + T +I+GFCK G + A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 299 LKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVL 358
+L M + P + ++ L G + +A L++ M + P +V++N ++
Sbjct: 514 KGLLCKMRVSEL-QPSVFDYNCLLSSLCKEGSLDQAWR-LFEEMQRDNNFPDVVSFNIMI 571
Query: 359 RGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNI 418
G + ++ A+ + M G+ D TY+ +I+ + LDEA F+D +V
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Query: 419 HDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKRE-AYQ 477
D ++ +++K G+ + + +LVD + + V+D C S + A +
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKR 691
Query: 478 ILR 480
+LR
Sbjct: 692 LLR 694
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 206/455 (45%), Gaps = 23/455 (5%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C + LF ++ RG P ++Y TLI G+C+ G++ A ++F+ M GV PN
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
TY+ L+ G+ + A L+ + E+ +E N + +++ LC++G V +
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP-----NAVTYNIIINKLCKDGLVADA 371
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRG--LTPSLVSYNSIV 181
I E M + ++ + ++ LC G AS+++Y+M K P ++SYN+++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 182 HGLCKHGGCMRA---YQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSK 238
HGLCK +A Y LL E + G T +L+ D+ KA ++ + +
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 239 KDVDRTRICNIYLRALCLIKNPTELLNV----LVFMLQTQCQPDVITLNTVINGFCKMGR 294
K V + + C T +LNV L M ++ QP V N +++ CK G
Sbjct: 489 KIVRNSDTYTAMIDGFC----KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 295 IEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTY 354
+++A ++ +M PD V+F +I G L G I+ A +LL M + G SP + TY
Sbjct: 545 LDQAWRLFEEMQRDN-NFPDVVSFNIMIDGSLKAGDIKSAESLLVG-MSRAGLSPDLFTY 602
Query: 355 NAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVW 414
+ ++ +L ++EA F+ M+ G D+ V+ + D+ +V
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 415 PSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 449
+ D + ++ +C S + L + D
Sbjct: 663 KDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTD 697
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 120/234 (51%), Gaps = 3/234 (1%)
Query: 270 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 329
ML+T + ++L+ ++ + +M + A VL M+ F A + ++ GL
Sbjct: 98 MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGF-AFNVYNHNILLKGLCRNL 156
Query: 330 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 389
+A++LL + M + P + +YN V+RG + +E+A E+ N M G G T+
Sbjct: 157 ECGKAVSLLRE-MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 390 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 449
I+ID C++ ++DEA F ++ + D VY ++I+G C G++ E+++
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 450 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWR-ILDKLHG 502
G +P + YN +I G CKL +EA +I M + G+ P+ T+ ++D L G
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 338 LYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLC 397
Y+ M + V+ + +L ++R+ A V ML G + + I++ GLC
Sbjct: 94 FYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC 153
Query: 398 ESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIV 457
+ + +A ++ S + D + Y +I+G C ++ +A+ E+ SG + ++V
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 458 CYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
+ ++ID CK EA L+EM+ GL D V + L
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 241/502 (48%), Gaps = 11/502 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C S++ A + M G+ P++V+ ++L++GYC + + A + D+M G P+
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ T++ L+ G+ A L+ ++ +R + DL + +V+ LC+ G ++
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDL----VTYGTVVNGLCKRGDIDLA 242
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ M + +IDSLC+ A + M +G+ P++V+YNS+++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC +G A +LL ++ P+ T+ L++ E L +A K+ + M+ +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
T N+ + C+ E + FM+ C P++ T NT+INGFCK R+E+ +++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+M + + + VT+TTII G G A + Q++ R I+TY+ +L GL
Sbjct: 423 EM-SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-VPTDIMTYSILLHGLCS 480
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+++ A +F + + + Y +I+G+C++ ++ EA WD S D
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVT 537
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
Y MI GLC + EA ++ + G PN YN +I + + + ++++EMR
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 484 KNGLNPDAVTWRIL-DKLHGNR 504
+G DA T ++ + LH R
Sbjct: 598 SSGFVGDASTISLVTNMLHDGR 619
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 240/531 (45%), Gaps = 45/531 (8%)
Query: 2 DQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVL 61
++L + +V +A LF DM P++V + L+ + + ++ + ++M+ G+
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 62 PNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVN 121
+ TYS+ + R + A ++ K+ ++ E D+ ++L++ C ++
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDI----VTLSSLLNGYCHSKRIS 170
Query: 122 EVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIV 181
+ + + M + + F +I L + A +V M +RG P LV+Y ++V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 182 HGLCKHGGCMRAYQLLE-----------------------------------EGIQFGYL 206
+GLCK G A LL E G
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 207 PSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV 266
P+ TY L+ LC A ++L ML KK N + A E +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 267 LVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLL 326
M+Q PD IT N +INGFC R++EA ++ MV+ K C P+ T+ T+I G
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-KDCLPNIQTYNTLINGFC 409
Query: 327 NVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADS 386
R+++ + L++ M QRG VTY +++G F+ + A+ VF M+ V D
Sbjct: 410 KCKRVEDGVE-LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 387 TTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYE 446
TY+I++ GLC +LD A + + + ++Y MI+G+C++GK+ EA
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 447 LVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
L + P++V YN +I G C + +EA + R+M+++G P++ T+ L
Sbjct: 529 L---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 189/396 (47%), Gaps = 4/396 (1%)
Query: 107 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 166
F L+ ++ + V + E M ++ + I+ CR + A V+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 167 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 226
K G P +V+ +S+++G C A L+++ ++ GY P T+ L+ GL +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 227 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 286
+A ++ M+ + + LC + LN+L M + + +V+ NT+I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 287 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 346
+ CK +E A+ + +M K P+ VT+ ++I L N GR +A LL M ++
Sbjct: 266 DSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN-MLEKK 323
Query: 347 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 406
+P +VT+NA++ F+ ++ EA+++ M+ + D+ TY ++I+G C N+LDEAK
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 407 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 466
+ + +V + + Y +I G C+ ++ + V E+ G+ N V Y +I G
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 467 CKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 502
+ A + ++M N + D +T+ IL LHG
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL--LHG 477
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 188/402 (46%), Gaps = 11/402 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + A L M++ NVV + T+I C+ ++VA +F EM G+ PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TY+ L+ + A+ L+ + E+ ++ N F L+D+ +EG + E
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEK-----KINPNVVTFNALIDAFFKEGKLVEA 347
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
++ E+M Q + +I+ C R A ++ M + P++ +YN++++G
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
CK +L E Q G + + TY +++G D + A+ V + M+S +
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
+I L LC L + ++ +++ + ++ NT+I G CK G++ EA
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW---- 523
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
D+ PD VT+ T+I GL + +QEA + L++ M + G P TYN ++R R
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEA-DDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEA 405
+ E+ M G V D++T ++V + L +LD++
Sbjct: 583 DCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKS 623
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 294 RIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVT 353
++++A+ + DMV + P V F ++ + + + + ++L Q M G S + T
Sbjct: 63 KVDDAVDLFGDMVKSR-PFPSIVEFNKLLSAVAKMNKFELVISLGEQ-MQTLGISHDLYT 120
Query: 354 YNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV 413
Y+ + R ++ A V M+ +G D T + +++G C S ++ +A D +V
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 414 WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKR 473
D + + +I GL K EAV + ++V G P++V Y V++G CK
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 474 EAYQILREMRKNGLNPDAVTWR-ILDKL 500
A +L +M + + V + I+D L
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSL 268
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 231/508 (45%), Gaps = 69/508 (13%)
Query: 12 EAHKLFFDMKSRGHV------PNVVSYTTLIHGYC----------------RTGEMDVAY 49
+ HKL F + + G + P+VV++ TL+HG C TG ++ A
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AV 211
Query: 50 KVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFAN 109
+FD+M G+ P +T++ L+ G+ V A L+ K+ + L ++ +
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK-----GLHIDVVTYGT 266
Query: 110 LVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRG 169
+V+ +C+ G + M + + +ID LC+ G + A + M ++G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 170 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 229
+ P++ +YN ++ G C G A +LL + I+ P T+ L+ E L +A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 230 KVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGF 289
K LC E+L+ +F PD +T N++I GF
Sbjct: 387 K-----------------------LC-----DEMLHRCIF-------PDTVTYNSMIYGF 411
Query: 290 CKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSP 349
CK R ++A K + D++A +PD VTF TII R+ E + LL ++ +RG
Sbjct: 412 CKHNRFDDA-KHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI-SRRGLVA 465
Query: 350 GIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 409
TYN ++ G + + A+++F M+ GV D+ T I++ G CE+ +L+EA +
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 410 DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKL 469
+ I D Y +I G+C+ K+ EA L GV P++ YNV+I G C
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 470 SMKREAYQILREMRKNGLNPDAVTWRIL 497
S +A + +M+ NG PD T+ L
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 211/465 (45%), Gaps = 48/465 (10%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC RV EA L M +G +VV+Y T+++G C+ G+ A + +M +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ + YS ++D LC++G+
Sbjct: 293 KPDVVIYSA----------------------------------------IIDRLCKDGHH 312
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
++ + +M + F MID C GR A R++ M +R + P ++++N++
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ K G A +L +E + P TY ++ G C + + A+ + M S
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV 432
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
V I ++Y RA K E + +L + + + T NT+I+GFC++ + A
Sbjct: 433 VTFNTIIDVYCRA----KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ +M++ C PD +T +++G +++EAL L++V+ V YN ++ G
Sbjct: 489 LFQEMISHGVC-PDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNIIIHG 546
Query: 361 LFRLRRVEEAKEVFNCMLGI-GVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
+ + +V+EA ++F C L I GV D TY ++I G C + + +A + + +
Sbjct: 547 MCKGSKVDEAWDLF-CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVID 464
DN Y +I+G ++G+I +++ + E+ +G + + +V D
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 181/414 (43%), Gaps = 28/414 (6%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
+C + A L M+ P+VV Y+ +I C+ G A +F EM G+ PN
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
TY+ ++ G A L+ + ER +++ + F L+ + +EG + E
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIER-----EINPDVLTFNALISASVKEGKLFEA 385
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
++ ++M + MI C+ R A + +M +P +V++N+I+
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDV 441
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
C+ QLL E + G + + TY L+ G C +L A+ + Q M+S
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
T CNI L C + E L + + ++ D + N +I+G CK +++EA +
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL-- 559
Query: 304 DMVAGKFCA-------PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNA 356
FC+ PD T+ +I G I +A N+L+ M G+ P TYN
Sbjct: 560 ------FCSLPIHGVEPDVQTYNVMISGFCGKSAISDA-NVLFHKMKDNGHEPDNSTYNT 612
Query: 357 VLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
++RG + ++++ E+ + M G D+ T +V D L +LD K F D
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLD--KSFSD 663
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 6/228 (2%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D C RV E +L ++ RG V N +Y TLIHG+C ++ A +F EM GV
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+++T ++L+ G +E A +L+E ++ + + ++ A+ ++ +C+ V
Sbjct: 499 CPDTITCNILLYGFCENEKLEEA----LELFEVIQMSK-IDLDTVAYNIIIHGMCKGSKV 553
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+E + + +P + MI C A+ + + M+ G P +YN++
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKA 228
+ G K G ++ +L+ E G+ T K +V L + L+K+
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS 660
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/523 (23%), Positives = 241/523 (46%), Gaps = 44/523 (8%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
++ EAH+ F ++S+G ++ + LI R G +++A+ V+ E+ GV N T +
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
++V + + +E+ + ++ +E+ + + + L+ + +G + E F +
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQV-----QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
MP + +I+ LC+ G+ A V M + GL+P +Y S++ CK G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
+ ++ + +P + ++ +L+KA + + I
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 249 IYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAG 308
I ++ C + +N+ MLQ C DV+T NT+++G CK + EA K+ N+M
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE- 473
Query: 309 KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVE 368
+ PD+ T T +I G +G +Q A+ L +Q M ++ +VTYN +L G ++ ++
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMEL-FQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMI 428
AKE++ M+ ++ +Y+I+++ LC L EA R WD+++ + + +MI
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 429 KGLCRSGKIHEAVHFLYELVDSG------------------------------------- 451
KG CRSG + FL +++ G
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 452 VTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW 494
+ P++ YN ++ G C+ + +EA +LR+M + G+NPD T+
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 225/492 (45%), Gaps = 9/492 (1%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC ++ + ++ +G P++V+Y TLI Y G M+ A+++ + M G
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P TY+ ++ G+ + ERA + ++ LS ++ + +L+ C++G V
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLR-----SGLSPDSTTYRSLLMEACKKGDV 356
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
E ++ DM V + M+ RSG A +++ GL P V Y +
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ G C+ G A L E +Q G TY ++ GLC L +A K+ M +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
+ I + C + N + + M + + + DV+T NT+++GF K+G I+ A +
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ DMV+ K P ++++ ++ L + G + EA ++ M + P ++ N++++G
Sbjct: 537 IWADMVS-KEILPTPISYSILVNALCSKGHLAEAFR-VWDEMISKNIKPTVMICNSMIKG 594
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSN--I 418
R + + M+ G V D +Y +I G + +A + +
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 419 HDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQI 478
D + Y +++ G CR ++ EA L ++++ GV P+ Y +I+G EA++I
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Query: 479 LREMRKNGLNPD 490
EM + G +PD
Sbjct: 715 HDEMLQRGFSPD 726
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 226/504 (44%), Gaps = 30/504 (5%)
Query: 25 HVPNV----VSYTTLIHGYCRTGEMDVAYKVFDEM-RHCGV----LPNSL---------- 65
H PN +S + +IH R+G + A M R GV + NSL
Sbjct: 105 HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSN 164
Query: 66 --TYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ +L+R ++ R + A+ L + +V+ A L+ SL R G+V
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLL-----RSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ + +++ + + M+++LC+ G+ + ++++G+ P +V+YN+++
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFML-SKKDVD 242
G A++L+ G+ P +TY ++ GLC E+A++V ML S D
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 243 RTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVL 302
T ++ + A C + E V M PD++ +++++ F + G +++AL
Sbjct: 340 STTYRSLLMEA-CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 303 NDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLF 362
N + PD V +T +I G G I A+NL + M Q+G + +VTYN +L GL
Sbjct: 399 NSVKEAGLI-PDNVIYTILIQGYCRKGMISVAMNLRNE-MLQQGCAMDVVTYNTILHGLC 456
Query: 363 RLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNY 422
+ + + EA ++FN M + DS T I+IDG C+ L A + + D
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 423 VYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREM 482
Y ++ G + G I A ++V + P + Y+++++ C EA+++ EM
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 483 RKNGLNPDAVTWRILDKLHGNRGN 506
+ P + + K + GN
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGN 600
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 4 LCGLSRVGE---AHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
L G +VG+ A +++ DM S+ +P +SY+ L++ C G + A++V+DEM +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P + + +++G R+ + + K+ E + ++ L+ RE +
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMIS-----EGFVPDCISYNTLIYGFVREENM 636
Query: 121 NEVFRIAEDMP--QGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYN 178
++ F + + M QG V + F ++ CR + A V+ M +RG+ P +Y
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 179 SIVHGLCKHGGCMRAYQLLEEGIQFGYLPSE 209
+++G A+++ +E +Q G+ P +
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 247/491 (50%), Gaps = 18/491 (3%)
Query: 10 VGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEM-RHCGVLPNSLTYS 68
+ A ++F DM G NV ++ L++GYC G+++ A + + M V P+++TY+
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+++ + + + L+ + ++ L N + NLV C+ G + E F+I E
Sbjct: 245 TILKAMSKKGRLSDLKELLLDM-----KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M Q + + +I+ LC +G ++ M+ L P +V+YN+++ G + G
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEK-ARKVLQFM----LSKKDVDR 243
+ A +L+E+ G ++ T+ + ++ LC E E RKV + + S V
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
+ YL+ + + + L ++ M Q + + ITLNT+++ CK +++EA +LN
Sbjct: 420 HTLIKAYLK----VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
F D VT+ T+I G ++++AL + + M + +P + T+N+++ GL
Sbjct: 476 SAHKRGFIV-DEVTYGTLIMGFFREEKVEKALEM-WDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYV 423
+ E A E F+ + G++ D +T+ +I G C+ ++++A F+++ + S DNY
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 424 YAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMR 483
++ GLC+ G +A++F L++ + V YN +I CK +EAY +L EM
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 484 KNGLNPDAVTW 494
+ GL PD T+
Sbjct: 653 EKGLEPDRFTY 663
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 217/477 (45%), Gaps = 14/477 (2%)
Query: 27 PNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVL 86
P+ + + Y G+ VA ++F +M + PN LT + L+ G++R
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSS------ 182
Query: 87 MFKLWERMKEEEDL-----SVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVN-EEF 140
F + + +D+ S+N F LV+ C EG + + + E M VN +
Sbjct: 183 -FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV 241
Query: 141 ACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEG 200
++ ++ + GR ++ M+K GL P+ V+YN++V+G CK G A+Q++E
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 201 IQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNP 260
Q LP TY +L+ GLC + + +++ M S K N + +
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 261 TELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTT 320
E ++ M + + +T N + CK + E + + ++V +PD VT+ T
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 321 IIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGI 380
+I L VG + AL ++ + M Q+G +T N +L L + R+++EA + N
Sbjct: 422 LIKAYLKVGDLSGALEMMRE-MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 381 GVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEA 440
G + D TY +I G ++++A WD++ + ++I GLC GK A
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 441 VHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
+ EL +SG+ P+ +N +I G CK +A++ E K+ PD T IL
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 194/437 (44%), Gaps = 9/437 (2%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
R+ + +L DMK G VPN V+Y L++GYC+ G + A+++ + M+ VLP+ TY+
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN 314
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+L+ G+ + R + + + +K + D+ + L+D G E ++ E
Sbjct: 315 ILINGLCNAGSM-REGLELMDAMKSLKLQPDV----VTYNTLIDGCFELGLSLEARKLME 369
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVY-VMRKRGLTPSLVSYNSIVHGLCKH 187
M + + LC+ + +R V ++ G +P +V+Y++++ K
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 188 GGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRIC 247
G A +++ E Q G + T +++ LC E L++A +L + +
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 248 NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA 307
+ + + L + M + + P V T N++I G C G+ E A++ +++
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 308 GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRV 367
PD TF +II G GR+++A Y + + P T N +L GL +
Sbjct: 550 SGLL-PDDSTFNSIILGYCKEGRVEKAFE-FYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 368 EEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAM 427
E+A FN ++ V D+ TY +I C+ +L EA ++ D + Y +
Sbjct: 608 EKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 428 IKGLCRSGKIHEAVHFL 444
I L GK+ E L
Sbjct: 667 ISLLMEDGKLSETDELL 683
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 182/402 (45%), Gaps = 9/402 (2%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C L + EA ++ MK +P++ +Y LI+G C G M ++ D M+ + P+
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
+TY+ L+ G A KL E+M E + + N + LC+E V
Sbjct: 346 VTYNTLIDGCFELGLSLEAR----KLMEQM-ENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 125 RIAEDMPQGKSVNEEFACGH-MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
R +++ + + H +I + + G GA ++ M ++G+ + ++ N+I+
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LCK A+ LL + G++ E TY L+ G E +EKA ++ M K
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
N + LC + + ++ PD T N++I G+CK GR+E+A + N
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+ + F PD T ++ GL G ++ALN ++ +R VTYN ++ +
Sbjct: 581 ESIKHSF-KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD--TVTYNTMISAFCK 637
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEA 405
++++EA ++ + M G+ D TY I L E +L E
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 183/399 (45%), Gaps = 21/399 (5%)
Query: 12 EAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMD-VAYKVFDEMRHCGVLPNSLTYSVL 70
EA KL M++ G N V++ + C+ + + V KV + + G P+ +TY L
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 71 VRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDM 130
++ L+ D+ A +M ++ ++ + +N ++D+LC+E ++E +
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQK-----GIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 131 PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGC 190
+ + +E G +I R + A + M+K +TP++ ++NS++ GLC HG
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 191 MRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIY 250
A + +E + G LP + T+ ++ G C E +EKA + + CNI
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 251 LRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKF 310
L LC + LN +++ + + D +T NT+I+ FCK +++EA +L++M K
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEM-EEKG 655
Query: 311 CAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEA 370
PD T+ + I L+ G++ E LL + + G + R +VE
Sbjct: 656 LEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG-------------SMKRDLQVETE 702
Query: 371 KEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 409
K + ++ Y+ VID LC +L E R +
Sbjct: 703 KNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSY 741
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 22/299 (7%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC ++ EAH L RG + + V+Y TLI G+ R +++ A +++DEM+ +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKE--EEDLSVNNAAFANLVDSLCREG 118
P T++ L+ G+ E A E+ E E L +++ F +++ C+EG
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELA-------MEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Query: 119 YVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYN 178
V + F + + + + C +++ LC+ G A + + + V+YN
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYN 629
Query: 179 SIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSK 238
+++ CK AY LL E + G P TY + L + L + ++L+ S
Sbjct: 630 TMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK-KFSG 688
Query: 239 KDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEE 297
K R + KNP + + + + I + VI+ C GR++E
Sbjct: 689 KFGSMKRDLQVETE-----KNPATSES------KEELNTEAIAYSDVIDELCSRGRLKE 736
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 233/509 (45%), Gaps = 42/509 (8%)
Query: 24 GHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 83
G PNVV++ TLI+G+C+ GEMD A+ +F M G+ P+ + YS L+ G + +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 84 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMP-QGKSVNEEFAC 142
+ L + + + ++ F++ +D + G + + + M QG S N
Sbjct: 341 HKLFSQALHK-----GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN-VVTY 394
Query: 143 GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQ 202
+I LC+ GR + A + + KRG+ PS+V+Y+S++ G CK G + L E+ I+
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 203 FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTE 262
GY P Y VLV+GL + + A + ML + + N + C + E
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 263 LLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTII 322
L V M +PDV T TV+ GR+EEAL + M PDA+ + T+I
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL-EPDALAYCTLI 573
Query: 323 ---------------FGLLNVGRIQE-------ALNLLYQV------------MPQRGYS 348
F L+ +I ++LL++ + +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 349 PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRF 408
P IVTYN ++ G LRR++EA+ +F + ++ T I+I LC++N +D A R
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 409 WDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACK 468
+ + + + Y ++ +S I + E+ + G++P+IV Y+++IDG CK
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 469 LSMKREAYQILREMRKNGLNPDAVTWRIL 497
EA I + L PD V + IL
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 211/440 (47%), Gaps = 15/440 (3%)
Query: 20 MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD 79
M +G PNVV+YT LI G C+ G + A+ ++ ++ G+ P+ +TYS L+ G + +
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 80 VERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 139
+ R+ +++ +M D+ + + LVD L ++G + R + M G+S+
Sbjct: 442 L-RSGFALYEDMIKMGYPPDVVI----YGVLVDGLSKQGLMLHAMRFSVKM-LGQSIRLN 495
Query: 140 FAC-GHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLE 198
+ID CR R A +V +M G+ P + ++ +++ G A L
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 199 EGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCL-- 256
+ G P Y L++ C ++ M K +CN+ + L
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 615
Query: 257 -IKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 315
I++ ++ N L+ + + +PD++T NT+I G+C + R++EA ++ + F P+
Sbjct: 616 RIEDASKFFNNLI---EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF-GPNT 671
Query: 316 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 375
VT T +I L + A+ + + +M ++G P VTY ++ + +E + ++F
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRM-FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 376 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSG 435
M G+ +Y+I+IDGLC+ ++DEA + + + D YA +I+G C+ G
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Query: 436 KIHEAVHFLYELVDSGVTPN 455
++ EA ++ +GV P+
Sbjct: 791 RLVEAALLYEHMLRNGVKPD 810
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 206/469 (43%), Gaps = 40/469 (8%)
Query: 31 SYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKL 90
S+ T+ H R G DVA KVFDEM + ++VL G +R R ++ A+V F
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEM----ITNRGKDFNVL--GSIRDRSLD-ADVCKF-- 151
Query: 91 WERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLC 150
L++ CR G V++ I Q V + + M++SL
Sbjct: 152 -------------------LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192
Query: 151 RSGRNHGASRVVYVMRKRGLTPSLVSYNSIV-HGLCKHGGCMRAYQL----LEEGIQFGY 205
S R + + + G+ PS VS + V L G +A +E G + G
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252
Query: 206 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLN 265
+ K L +E A ++L +L + C +
Sbjct: 253 VSCNKVLKGL-----SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307
Query: 266 VLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGL 325
+ M Q +PD+I +T+I+G+ K G + K+ + + K D V F++ I
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH-KGVKLDVVVFSSTIDVY 366
Query: 326 LNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVAD 385
+ G + A +++Y+ M +G SP +VTY +++GL + R+ EA ++ +L G+
Sbjct: 367 VKSGDLATA-SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 386 STTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLY 445
TY+ +IDG C+ L ++D++ D +Y ++ GL + G + A+ F
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 446 ELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTW 494
+++ + N+V +N +IDG C+L+ EA ++ R M G+ PD T+
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 11/301 (3%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D C L+R EA K+F M G P+V ++TT++ G ++ A +F M G+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P++L Y L+ + + +F L +R K D++V N ++ L + +
Sbjct: 563 EPDALAYCTLIDAFCKHMK-PTIGLQLFDLMQRNKISADIAVCNV----VIHLLFKCHRI 617
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ + ++ +GK + MI C R A R+ +++ P+ V+ +
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 181 VHGLCKHG---GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 237
+H LCK+ G +R + ++ E G P+ TY L++ D+E + K+ + M
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEK---GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 238 KKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEE 297
K +I + LC E N+ + + PDV+ +I G+CK+GR+ E
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Query: 298 A 298
A
Sbjct: 795 A 795
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 45/336 (13%)
Query: 165 MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY-LPSEHTYKVLVEGLCGES 223
+R R L + + ++ C++G +A ++ Q G +P + Y++L L G
Sbjct: 139 IRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSD 195
Query: 224 DLEKARKVLQFMLSKKDVDRTRIC--NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVIT 281
++ L + ++ + + L AL T+ L+ +++ + +++
Sbjct: 196 RVDLIADHFD-KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS 254
Query: 282 LNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQV 341
N V+ G + +IE A ++L+ +V AP+ VTF T+I G G + A +L ++V
Sbjct: 255 CNKVLKGL-SVDQIEVASRLLS-LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL-FKV 311
Query: 342 MPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQ 401
M QRG P ++ Y+ ++ G F+ + ++F+ L GV D ++ ID +S
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 402 LDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNV 461
L A + VY M LC+ G++PN+V Y +
Sbjct: 372 LATA---------------SVVYKRM---LCQ-----------------GISPNVVTYTI 396
Query: 462 VIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
+I G C+ EA+ + ++ K G+ P VT+ L
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + + A ++F M +G PN V+Y L+ + ++ +++ ++K+F+EM+ G+ P+
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
++YS+++ G+ + V+ A + + + L + A+A L+ C+ G + E
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAI-----DAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 124 FRIAEDM 130
+ E M
Sbjct: 796 ALLYEHM 802
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC RV EA +F +P+VV+Y LI GYC+ G + A +++ M GV
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Query: 61 LPNSLTYSVL 70
P+ L L
Sbjct: 808 KPDDLLQRAL 817
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 236/487 (48%), Gaps = 44/487 (9%)
Query: 20 MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRD 79
M SRG VP+V Y L + G K+ DEM G+ PN Y++ + + R
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 80 VERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 139
+E A K++E MK+ L N ++ ++D C+ G V + + + +++ + +
Sbjct: 250 MEEAE----KMFELMKKHGVLP-NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 140 FACGHMIDSLCRSGRNHGASRVVYV-MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLE 198
G ++D C++ R +R ++V M K G+ P+L YN ++HG CK G + A LL
Sbjct: 305 VVFGTLVDGFCKA-RELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 199 EGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIK 258
E P TY +L+ GLC E + +A ++ Q M +++
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER------------------- 404
Query: 259 NPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTF 318
+F P T N++I+G+CK +E+AL + ++M A P+ +TF
Sbjct: 405 ---------IF-------PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV-EPNIITF 447
Query: 319 TTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCML 378
+T+I G NV I+ A+ L ++ M +G P +VTY A++ F+ ++EA +++ ML
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFE-MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 379 GIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIH 438
G+ + T+A ++DG + +L A F+ + + ++ + +I+GLC++G I
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 439 EAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILD 498
A F ++ G+TP+I Y ++ G + + + +M K G+ P+ + ++L
Sbjct: 567 RASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLA 626
Query: 499 KLHGNRG 505
+ + G
Sbjct: 627 RFYQANG 633
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 7/382 (1%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC +++ EA K+F MK G +PN+ +Y+ +I GYC+TG + AY ++ E+ +LPN
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ + LV G + R++ A L + + + +L V N L+ C+ G + E
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMV-KFGVDPNLYVYNC----LIHGHCKSGNMLEA 358
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ +M + F +I+ LC + A+R+ M+ + PS +YNS++HG
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
CK +A L E G P+ T+ L++G C D++ A + M K V
Sbjct: 419 YCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
+ A N E L + ML+ P+ T +++GF K GR+ A+
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
+ + C + V FT +I GL G I A + + M G +P I +Y ++L+G +
Sbjct: 539 ENNQQRSCW-NHVGFTCLIEGLCQNGYILRA-SRFFSDMRSCGITPDICSYVSMLKGHLQ 596
Query: 364 LRRVEEAKEVFNCMLGIGVVAD 385
+R+ + + M+ G++ +
Sbjct: 597 EKRITDTMMLQCDMIKTGILPN 618
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 217/502 (43%), Gaps = 70/502 (13%)
Query: 12 EAHKLFFDMKSRGHVP---NVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
EA KLF + SR V ++ S++ +IH TG H L L S
Sbjct: 56 EAFKLF-ETSSRSRVSKSNDLQSFSAVIH--VLTGA------------HKYTLARCLIKS 100
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
++ R R E +N + +L+ +++ + + F+ L+ G E ++
Sbjct: 101 LIER---LKRHSEPSN-MSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSR 156
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
+M K + AC +++ L R R +M RGL P + Y + K G
Sbjct: 157 EM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQG 213
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
+ +LL+E G P+ + Y + + LC ++ +E+A K+ + M KK
Sbjct: 214 LYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM--KKH-------- 263
Query: 249 IYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAG 308
VL P++ T + +I+G+CK G + +A + +++
Sbjct: 264 ----------------GVL---------PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVA 298
Query: 309 KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVE 368
+ P+ V F T++ G + A +L M + G P + YN ++ G + +
Sbjct: 299 EL-LPNVVVFGTLVDGFCKARELVTARSLFVH-MVKFGVDPNLYVYNCLIHGHCKSGNML 356
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDI----VWPSNIHDNYVY 424
EA + + M + + D TY I+I+GLC +Q+ EA R + + ++PS+ Y
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA----TY 412
Query: 425 AAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRK 484
++I G C+ + +A+ E+ SGV PNI+ ++ +IDG C + + A + EM
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 485 NGLNPDAVTWRILDKLHGNRGN 506
G+ PD VT+ L H N
Sbjct: 473 KGIVPDVVTYTALIDAHFKEAN 494
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 151/359 (42%), Gaps = 42/359 (11%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D C + A LF M G PN+ Y LIHG+C++G M A + EM +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ TY++L+ G+ V AN +L+++MK E + ++A + +L+ C+E +
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEAN----RLFQKMKNER-IFPSSATYNSLIHGYCKEYNM 425
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ + +M +ID C A + + M +G+ P +V+Y ++
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ K A +L + ++ G P++HT+ LV+G E L A Q +
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ------E 539
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
++ R C ++ CLI+ G C+ G I A +
Sbjct: 540 NNQQRSCWNHVGFTCLIE-----------------------------GLCQNGYILRASR 570
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
+DM + PD ++ +++ G L RI + + +L M + G P ++ + R
Sbjct: 571 FFSDMRSCGI-TPDICSYVSMLKGHLQEKRITDTM-MLQCDMIKTGILPNLLVNQLLAR 627
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 223/471 (47%), Gaps = 44/471 (9%)
Query: 18 FDMKSR--GHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVL 75
FD+ S+ PN VSY+ LIHG C G ++ A+ + D+M G P++ TY+VL++ +
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 76 RTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKS 135
+++A F L++ M N + L+D LCR+G + E + M + +
Sbjct: 313 DRGLIDKA----FNLFDEMIPR-GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 136 VNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQ 195
+I+ C+ GR A ++ VM KR P++ ++N ++ GLC+ G +A
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 196 LLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALC 255
LL+ + G P +Y VL++GLC E + A K+L M N +
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM------------NCF----- 470
Query: 256 LIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 315
+PD +T +IN FCK G+ + A L M+ K + D
Sbjct: 471 ------------------DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR-KGISLDE 511
Query: 316 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 375
VT TT+I G+ VG+ ++AL +L ++ R + + N +L L + +V+E +
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP-HSLNVILDMLSKGCKVKEELAMLG 570
Query: 376 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSG 435
+ +G+V TY ++DGL S + + R + + + + Y Y +I GLC+ G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 436 KIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNG 486
++ EA L + DSGV+PN V Y V++ G A + +R M + G
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 231/493 (46%), Gaps = 6/493 (1%)
Query: 13 AHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVR 72
A+ + M++ G V ++ Y T+++ C+ G + A ++ G + +S + L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 73 GVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQ 132
G R ++ A K+++ M +E + N+ +++ L+ LC G + E F + + M +
Sbjct: 239 GFCRGLNLRDA----LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE 294
Query: 133 GKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMR 192
+I +LC G A + M RG P++ +Y ++ GLC+ G
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 193 AYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLR 252
A + + ++ PS TY L+ G C + + A ++L M + R N +
Sbjct: 355 ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 253 ALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCA 312
LC + P + +++L ML PD+++ N +I+G C+ G + A K+L+ M
Sbjct: 415 GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI-E 473
Query: 313 PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKE 372
PD +TFT II G+ A L +M ++G S VT ++ G+ ++ + +A
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFL-GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 373 VFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLC 432
+ ++ + ++ + +++D L + ++ E I + Y ++ GL
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 433 RSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAV 492
RSG I + L + SG PN+ Y ++I+G C+ EA ++L M+ +G++P+ V
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 493 TWRILDKLHGNRG 505
T+ ++ K + N G
Sbjct: 653 TYTVMVKGYVNNG 665
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 210/439 (47%), Gaps = 19/439 (4%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + R+ EA L M +G P+ +YT LI C G +D A+ +FDEM G PN
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
TY+VL+ G+ R +E AN + K+ ++ + + + L++ C++G V
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMV-----KDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 124 FRIAEDM------PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSY 177
F + M P ++ NE +++ LCR G+ + A ++ M GL+P +VSY
Sbjct: 391 FELLTVMEKRACKPNVRTFNE------LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 178 NSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 237
N ++ GLC+ G AY+LL F P T+ ++ C + + A L ML
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 238 KKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEE 297
K + +C + + L +L +++ + +LN +++ K +++E
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 298 ALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAV 357
L +L + P VT+TT++ GL+ G I + +L ++M G P + Y +
Sbjct: 565 ELAMLGKINKLGL-VPSVVTYTTLVDGLIRSGDITGSFRIL-ELMKLSGCLPNVYPYTII 622
Query: 358 LRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSN 417
+ GL + RVEEA+++ + M GV + TY +++ G + +LD A +V
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Query: 418 IHDNYVYAAMIKGLCRSGK 436
++ +Y+++++G S K
Sbjct: 683 ELNDRIYSSLLQGFVLSQK 701
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 234/506 (46%), Gaps = 38/506 (7%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC ++ EA+ + M P+V++Y LI+GYC+ G + A+++ M
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN T++ L+ G+ R +A L +RM + LS + ++ L+D LCREG++
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKA----VHLLKRML-DNGLSPDIVSYNVLIDGLCREGHM 457
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
N +++ M + +I++ C+ G+ AS + +M ++G++ V+ ++
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCG----ESDLEKARKVLQFML 236
+ G+CK G A +LE ++ L + H+ V+++ L + +L K+ + L
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 237 SKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIE 296
V T + + +R+ + T +L M + C P+V +ING C+ GR+E
Sbjct: 578 VPSVVTYTTLVDGLIRS----GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 297 EALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNA 356
EA K+L+ M +P+ VT+T ++ G +N G++ AL + + M +RGY Y++
Sbjct: 634 EAEKLLSAMQDSGV-SPNHVTYTVMVKGYVNNGKLDRALETV-RAMVERGYELNDRIYSS 691
Query: 357 VLRGLFRLRR---------------VEEAKEVFNCMLGI-----GVVADSTTYAIVIDGL 396
+L+G ++ E E N ++ + G ++ + ++ L
Sbjct: 692 LLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRL 749
Query: 397 CESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNI 456
C+ + DE+ + V + +++ C K + + + ++ SG P+
Sbjct: 750 CKEGRTDESNDLVQN-VLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSF 808
Query: 457 VCYNVVIDGACKLSMKREAYQILREM 482
+ +VI G K A +++ E+
Sbjct: 809 KSFCLVIQGLKKEGDAERARELVMEL 834
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 195/461 (42%), Gaps = 64/461 (13%)
Query: 6 GLSRVGEAHK---LFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLP 62
GL RVG+ +K L M G P++VSY LI G CR G M+ AYK+ M + P
Sbjct: 415 GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474
Query: 63 NSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNE 122
+ LT++ ++ + + A+ + + + +S++ L+D +C+ G +
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRK-----GISLDEVTGTTLIDGVCKVGKTRD 529
Query: 123 VFRIAEDM-------------------PQGKSVNEEFAC----------------GHMID 147
I E + +G V EE A ++D
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 148 SLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLP 207
L RSG G+ R++ +M+ G P++ Y I++GLC+ G A +LL G P
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 208 SEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCL----IKNPTEL 263
+ TY V+V+G L++A + ++ M+ + RI + L+ L I N E
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEES 709
Query: 264 LNVLVFMLQT--QCQPDVITLNTVING------------FCKMGRIEEALKVLNDMVAGK 309
+ + +T +C ++I++ + G CK GR +E+ ++ +++
Sbjct: 710 TVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERG 769
Query: 310 FCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEE 369
A+ I+ + + + + L+ V+ + G+ P ++ V++GL + E
Sbjct: 770 VFLEKAMDI--IMESYCSKKKHTKCMELITLVL-KSGFVPSFKSFCLVIQGLKKEGDAER 826
Query: 370 AKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
A+E+ +L V + + ++ L E ++ + D
Sbjct: 827 ARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVID 867
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 131/292 (44%), Gaps = 55/292 (18%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D L +V E + + G VP+VV+YTTL+ G R+G++ ++++ + M+ G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWE---------------------------- 92
LPN Y++++ G+ + VE A L+ + +
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 93 --RMKEEEDLSVNNAAFANLVDS--LCREGYVNE----VFRIAEDMPQGKSVNEEFA--- 141
R E +N+ +++L+ L ++G N V IA + +NE +
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 142 ---------CGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLC---KHGG 189
C ++ LC+ GR ++ +V + +RG+ + + I+ C KH
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTK 791
Query: 190 CMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDV 241
CM L+ ++ G++PS ++ ++++GL E D E+AR+++ +L+ V
Sbjct: 792 CMELITLV---LKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGV 840
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 332 QEALNLLYQVMPQR---GYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTT 388
+E L L+Y R G+ Y+++L L +L A + M G V
Sbjct: 138 KEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMID 197
Query: 389 YAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELV 448
Y +++ LC++ + A+ F I+ + D+++ +++ G CR + +A+ +++++
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALK-VFDVM 256
Query: 449 DSGVT--PNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 505
VT PN V Y+++I G C++ EA+ + +M + G P T+ +L K +RG
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 238/492 (48%), Gaps = 14/492 (2%)
Query: 12 EAHKLFFD-MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVL 70
E + F D M G P+V SY+T+I+ + G++D A ++FDEM GV P+ Y++L
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 71 VRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDM 130
+ G L+ +D + A +LW+R+ E+ + N ++ L + G V++ +I E M
Sbjct: 226 IDGFLKEKDHKTA----MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 281
Query: 131 PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGG- 189
Q + + + +I LC +G A V + +R + +V+YN+++ G C+ G
Sbjct: 282 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341
Query: 190 --CMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRIC 247
+ ++++E + +Y +L++GL +++A + + M +K
Sbjct: 342 KESLELWRIMEHKNSVNIV----SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Query: 248 NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA 307
I++ LC+ + L V+ + + DV ++I+ CK R+EEA ++ +M +
Sbjct: 398 GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM-S 456
Query: 308 GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRV 367
++ +I GL+ R+ EA + + M + G P +V+YN ++ GL + +
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEA-SFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 368 EEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAM 427
EA ML G D TY+I++ GLC ++D A W + D ++ +
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 428 IKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 487
I GLC GK+ +A+ + + T N+V YN +++G K+ A I M K GL
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 488 NPDAVTWRILDK 499
PD +++ + K
Sbjct: 636 QPDIISYNTIMK 647
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 221/478 (46%), Gaps = 50/478 (10%)
Query: 24 GHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERA 83
G P + SY TL++ + + +F GV PN TY+VL++ + ++ E+A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 84 NVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACG 143
+ +W +EG+ +VF +
Sbjct: 169 RGFLDWMW------------------------KEGFKPDVFSYST--------------- 189
Query: 144 HMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCK---HGGCMRAY-QLLEE 199
+I+ L ++G+ A + M +RG+ P + YN ++ G K H M + +LLE+
Sbjct: 190 -VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248
Query: 200 GIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKN 259
+ P+ T+ +++ GL ++ K+ + M + + + LC N
Sbjct: 249 SSVY---PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 260 PTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFT 319
+ +V + + + DV+T NT++ GFC+ G+I+E+L++ M + + V++
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN--SVNIVSYN 363
Query: 320 TIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLG 379
+I GLL G+I EA +++++MP +GY+ TY + GL V +A V +
Sbjct: 364 ILIKGLLENGKIDEA-TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 380 IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHE 439
G D YA +ID LC+ +L+EA ++ +++V A+I GL R ++ E
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 440 AVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
A FL E+ +G P +V YN++I G CK EA ++EM +NG PD T+ IL
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 197/444 (44%), Gaps = 44/444 (9%)
Query: 60 VLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGY 119
V P SL+ + VL+ E+ F L++ + + + +++ L
Sbjct: 3 VFPKSLS----PKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRM 58
Query: 120 VNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRK-RGLTPSLVSYN 178
VN V RI E + + +E +I + ++ A V MR+ G P++ SYN
Sbjct: 59 VNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118
Query: 179 SIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSK 238
++++ + ++ L G P+ TY VL++ C + + EKAR L +M
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW-- 176
Query: 239 KDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEA 298
+ +PDV + +TVIN K G++++A
Sbjct: 177 ---------------------------------KEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 299 LKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVL 358
L++ ++M + + APD + +I G L + A+ L +++ P + T+N ++
Sbjct: 204 LELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 359 RGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNI 418
GL + RV++ +++ M D TY+ +I GLC++ +D+A+ ++++
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 419 HDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQI 478
D Y M+ G CR GKI E++ L+ +++ + NIV YN++I G + EA I
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMI 381
Query: 479 LREMRKNGLNPDAVTWRILDKLHG 502
R M G D T+ I +HG
Sbjct: 382 WRLMPAKGYAADKTTYGIF--IHG 403
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 8 SRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTY 67
SR+GEA +M G P VVSY LI G C+ G+ A EM G P+ TY
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 68 SVLVRGVLRTRDVERANVLMFKLWERMKE---EEDLSVNNAAFANLVDSLCREGYVNEVF 124
S+L+ G+ R R ++ L +LW + + E D+ ++N L+ LC G +++
Sbjct: 538 SILLCGLCRDRKID----LALELWHQFLQSGLETDVMMHNI----LIHGLCSVGKLDDAM 589
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+ +M +++ + G ++ A+ + M K GL P ++SYN+I+ GL
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGL 219
C G A + ++ G P+ +T+ +LV +
Sbjct: 650 CMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 4 LCGLSR---VGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
LCGL R + A +L+ G +V+ + LIHG C G++D A V M H
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCRE-GY 119
N +TY+ L+ G + D RA V+ ++ +M + D+ N L +CR Y
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMY-KMGLQPDIISYNTIMKGLC--MCRGVSY 657
Query: 120 VNEVFRIAED 129
E F A +
Sbjct: 658 AMEFFDDARN 667
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 6 GLSRVGEAHK---LFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLP 62
G +VG++++ ++ M G P+++SY T++ G C + A + FD+ R+ G+ P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 63 NSLTYSVLVRGVL 75
T+++LVR V+
Sbjct: 673 TVYTWNILVRAVV 685
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 239/508 (47%), Gaps = 34/508 (6%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
M C L V A F + G VP+V S+ LI+G C G + A ++ +M GV
Sbjct: 271 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 330
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKE--EEDLSVNNAAFANLVDSLCREG 118
P+S+TY++L +G + A WE +++ ++ LS + + L+ C+ G
Sbjct: 331 EPDSVTYNILAKGFHLLGMISGA-------WEVIRDMLDKGLSPDVITYTILLCGQCQLG 383
Query: 119 YVNEVFRIAEDM-PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSY 177
++ + +DM +G +N C M+ LC++GR A + M+ GL+P LV+Y
Sbjct: 384 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 443
Query: 178 NSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 237
+ ++HGLCK G A L +E LP+ T+ L+ GLC + L +AR +L ++S
Sbjct: 444 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 503
Query: 238 KKDVDRTRICNI----YLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMG 293
+ + NI Y ++ C I+ EL V++ +T P V T N++I G+CK
Sbjct: 504 SGETLDIVLYNIVIDGYAKSGC-IEEALELFKVVI---ETGITPSVATFNSLIYGYCKTQ 559
Query: 294 RIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVT 353
I EA K+L D++ AP V++TT++ N G + +++ L + M G P VT
Sbjct: 560 NIAEARKIL-DVIKLYGLAPSVVSYTTLMDAYANCGNTK-SIDELRREMKAEGIPPTNVT 617
Query: 354 YNAVLRGL------------FRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQ 401
Y+ + +GL R R E+ K+ M G+ D TY +I LC
Sbjct: 618 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 677
Query: 402 LDEAKRFWDDIVWPSNIH-DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYN 460
L A F +I+ N+ + Y +I LC G I +A F+Y L + V+ + Y
Sbjct: 678 LSGAFVFL-EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 736
Query: 461 VVIDGACKLSMKREAYQILREMRKNGLN 488
+I C A ++ ++ G N
Sbjct: 737 TLIKAHCVKGDPEMAVKLFHQLLHRGFN 764
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 227/458 (49%), Gaps = 23/458 (5%)
Query: 58 CGVLPNS--------LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFAN 109
C +L NS L + +L+ R R V+ + ++ K+ ++++L+V+ ++ +
Sbjct: 152 CELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKM-----KDQNLNVSTQSYNS 206
Query: 110 LVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRG 169
++ + +V++ +D E ++D LCR + A + +
Sbjct: 207 VLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKD 259
Query: 170 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 229
+ PS+VS+NSI+ G CK G A ++ G +PS +++ +L+ GLC + +A
Sbjct: 260 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 319
Query: 230 KVLQFMLSKKDVDRTRIC-NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVING 288
++ M +K V+ + NI + L+ + V+ ML PDVIT ++ G
Sbjct: 320 ELASDM-NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 378
Query: 289 FCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYS 348
C++G I+ L +L DM++ F + + ++ GL GRI EAL+L Q M G S
Sbjct: 379 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ-MKADGLS 437
Query: 349 PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRF 408
P +V Y+ V+ GL +L + + A +++ M ++ +S T+ ++ GLC+ L EA+
Sbjct: 438 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 497
Query: 409 WDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACK 468
D ++ D +Y +I G +SG I EA+ ++++G+TP++ +N +I G CK
Sbjct: 498 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 557
Query: 469 LSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 506
EA +IL ++ GL P V++ L + N GN
Sbjct: 558 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 595
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 196/415 (47%), Gaps = 11/415 (2%)
Query: 89 KLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV---FRIAEDMPQGKSVNEEFACGHM 145
K+W+ KE +D N ++ +VD LCR+ + + R +E G SV + +
Sbjct: 216 KMWDVYKEIKD--KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV---VSFNSI 270
Query: 146 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 205
+ C+ G A + K GL PS+ S+N +++GLC G A +L + + G
Sbjct: 271 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 330
Query: 206 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLN 265
P TY +L +G + A +V++ ML K I L C + N L
Sbjct: 331 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 390
Query: 266 VLVFMLQTQCQPD-VITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 324
+L ML + + +I + +++G CK GRI+EAL + N M A +PD V ++ +I G
Sbjct: 391 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL-SPDLVAYSIVIHG 449
Query: 325 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 384
L +G+ AL LY M + P T+ A+L GL + + EA+ + + ++ G
Sbjct: 450 LCKLGKFDMAL-WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 508
Query: 385 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFL 444
D Y IVIDG +S ++EA + ++ + ++I G C++ I EA L
Sbjct: 509 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 568
Query: 445 YELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDK 499
+ G+ P++V Y ++D + ++ REM+ G+ P VT+ ++ K
Sbjct: 569 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 623
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 178/394 (45%), Gaps = 19/394 (4%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC R+ EA LF MK+ G P++V+Y+ +IHG C+ G+ D+A ++DEM +LPN
Sbjct: 415 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 474
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
S T+ L+ G+ + + A L+ L E D+ + N S C E + E+
Sbjct: 475 SRTHGALLLGLCQKGMLLEARSLLDSLISS-GETLDIVLYNIVIDGYAKSGCIEEAL-EL 532
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
F++ + SV +I C++ A +++ V++ GL PS+VSY +++
Sbjct: 533 FKVVIETGITPSVA---TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLC------------GESDLEKARKV 231
G +L E G P+ TY V+ +GLC E EK ++
Sbjct: 590 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 649
Query: 232 LQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCK 291
L+ M S+ N ++ LC +K+ + L M T N +I+ C
Sbjct: 650 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 709
Query: 292 MGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGI 351
G I +A + + + + +TT+I G + A+ L +Q++ RG++ I
Sbjct: 710 YGYIRKADSFIYSL-QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL-HRGFNVSI 767
Query: 352 VTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVAD 385
Y+AV+ L R V E+K F ML G+ D
Sbjct: 768 RDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 7/256 (2%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C + EA K+ +K G P+VVSYTTL+ Y G ++ EM+ G+ P +
Sbjct: 556 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 615
Query: 65 LTYSVLVRGVLRTRDVERAN-VLMFKLWERMK------EEEDLSVNNAAFANLVDSLCRE 117
+TYSV+ +G+ R E N VL +++E+ K E E + + + ++ LCR
Sbjct: 616 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 675
Query: 118 GYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSY 177
+++ F E M +IDSLC G A +Y ++++ ++ S +Y
Sbjct: 676 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAY 735
Query: 178 NSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 237
+++ C G A +L + + G+ S Y ++ LC + +++ MLS
Sbjct: 736 TTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLS 795
Query: 238 KKDVDRTRICNIYLRA 253
+ IC + +++
Sbjct: 796 QGISPDLDICEVMIKS 811
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC + +A + ++ + + +YTTLI +C G+ ++A K+F ++ H G
Sbjct: 704 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 763
Query: 61 LPNSLTYSVLVRGVLR 76
+ YS ++ + R
Sbjct: 764 NVSIRDYSAVINRLCR 779
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 227/487 (46%), Gaps = 46/487 (9%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
++ +A LF DM P++V + L+ + + DV + +M G+ + T++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+++ V A ++ K+ + E + +++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTI-------------------------- 158
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
G +++ CR R A +V M + G P +V+YN+I+ LCK
Sbjct: 159 --------------GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
A+ +E + G P+ TY LV GLC S A ++L M+ KK +
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 249 IYLRALCLIKNPTELLNVLVF--MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMV 306
L A +KN L +F M++ PD++T +++ING C RI+EA ++ D++
Sbjct: 265 ALLDAF--VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLM 321
Query: 307 AGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRR 366
K C D V++ T+I G R+++ + L ++ M QRG VTYN +++G F+
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKL-FREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 367 VEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAA 426
V++A+E F+ M G+ D TY I++ GLC++ +L++A ++D+ D Y
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 427 MIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNG 486
+I+G+C++GK+ EA L G+ P+IV Y ++ G C + E + +M++ G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 487 LNPDAVT 493
L + T
Sbjct: 501 LMKNDCT 507
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 187/388 (48%), Gaps = 37/388 (9%)
Query: 107 FANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMR 166
F L+ ++ + + V + + M N+ + +I+ C + A ++ M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 167 KRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLE 226
K G P V+ S+V+G C+ A L+++ ++ GY P Y +++ LC
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC------ 201
Query: 227 KARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVI 286
K ++V K+++R I +P+V+T ++
Sbjct: 202 KTKRVNDAFDFFKEIERKGI-----------------------------RPNVVTYTALV 232
Query: 287 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 346
NG C R +A ++L+DM+ K P+ +T++ ++ + G++ EA L ++ M +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKI-TPNVITYSALLDAFVKNGKVLEAKEL-FEEMVRMS 290
Query: 347 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 406
P IVTY++++ GL R++EA ++F+ M+ G +AD +Y +I+G C++ ++++
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 407 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 466
+ + ++ + + Y +I+G ++G + +A F ++ G++P+I YN+++ G
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 467 CKLSMKREAYQILREMRKNGLNPDAVTW 494
C +A I +M+K ++ D VT+
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTY 438
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 171/365 (46%), Gaps = 49/365 (13%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC RV +A F +++ +G PNVV+YT L++G C + A ++ +M +
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN +TYS L+ ++ V A L F+ RM + D+ +++L++ LC +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEL-FEEMVRMSIDPDI----VTYSSLINGLCLHDRI 311
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+E ++ + M + + + +I+ C++ R ++ M +RGL + V+YN++
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ G + G +A + + FG P TY +L+ GLC +LEKA + + M K++
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-QKRE 430
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
+D D++T TVI G CK G++EEA
Sbjct: 431 MDL----------------------------------DIVTYTTVIRGMCKTGKVEEAWS 456
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG-------YSPGIVT 353
+ + + K PD VT+TT++ GL G + E + LY M Q G S G +T
Sbjct: 457 LFCSL-SLKGLKPDIVTYTTMMSGLCTKGLLHE-VEALYTKMKQEGLMKNDCTLSDGDIT 514
Query: 354 YNAVL 358
+A L
Sbjct: 515 LSAEL 519
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 179/387 (46%), Gaps = 7/387 (1%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C +V A + M G+ P+ V+ +L++G+CR + A + D+M G P+
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ Y+ ++ + +T+ V A F ++ + E + + N + LV+ LC ++
Sbjct: 190 IVAYNAIIDSLCKTKRVNDA----FDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
R+ DM + K ++D+ ++G+ A + M + + P +V+Y+S+++G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
LC H A Q+ + + G L +Y L+ G C +E K+ + M + V
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
T N ++ + + M PD+ T N ++ G C G +E+AL +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
DM + D VT+TT+I G+ G+++EA + L+ + +G P IVTY ++ GL
Sbjct: 425 DMQKREM-DLDIVTYTTVIRGMCKTGKVEEAWS-LFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYA 390
+ E + ++ M G++ + T +
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 164/327 (50%), Gaps = 4/327 (1%)
Query: 172 PSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKV 231
PS+V +N ++ + K L ++ G +T+ +++ C + A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 232 LQFMLS-KKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFC 290
L ML + DR I ++ + C ++ ++++ M++ +PD++ N +I+ C
Sbjct: 143 LGKMLKLGYEPDRVTIGSL-VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 291 KMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPG 350
K R+ +A + + K P+ VT+T ++ GL N R +A LL M ++ +P
Sbjct: 202 KTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD-MIKKKITPN 259
Query: 351 IVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD 410
++TY+A+L + +V EAKE+F M+ + + D TY+ +I+GLC +++DEA + +D
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 411 DIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLS 470
+V + D Y +I G C++ ++ + + E+ G+ N V YN +I G +
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 471 MKREAYQILREMRKNGLNPDAVTWRIL 497
+A + +M G++PD T+ IL
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNIL 406
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 120/237 (50%), Gaps = 13/237 (5%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC R+ EA+++F M S+G + +VVSY TLI+G+C+ ++ K+F EM G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+ N++TY+ L++G + DV++A F + D+ N L+ LC G +
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEF-FSQMDFFGISPDIWTYNI----LLGGLCDNGEL 416
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ I EDM + + + +I +C++G+ A + + +GL P +V+Y ++
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLS 237
+ GLC G L + Q G + ++ T + D+ + ++++ MLS
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLS 525
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 202/398 (50%), Gaps = 5/398 (1%)
Query: 99 DLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGA 158
++S N +F ++ +LC+ +V+ + MP+ K + + + ++D LC+ R A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 159 SRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEG 218
++ M+ G +PS V YN ++ GLCK G R +L++ G +P+E TY L+ G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 219 LCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPD 278
LC + L+KA +L+ M+S K + + L + T+ + +L M + +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 279 VITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLL 338
+ +I+G K G+ EEA+ + M A K C P+ V ++ ++ GL G+ EA +L
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKM-AEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 339 YQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCE 398
+ M G P TY+++++G F+ EEA +V+ M G + Y+++IDGLC
Sbjct: 421 NR-MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 399 SNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELV---DSGVTPN 455
++ EA W ++ D Y+++IKGLC G + A+ +E++ + P+
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 456 IVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVT 493
+V YN+++DG C A +L M G +PD +T
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 211/408 (51%), Gaps = 10/408 (2%)
Query: 60 VLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGY 119
+ PN L+++++++ + + R V+RA +++ M E + L + + L+D LC+E
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRA----IEVFRGMPERKCLP-DGYTYCTLMDGLCKEER 237
Query: 120 VNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 179
++E + ++M +ID LC+ G +++V M +G P+ V+YN+
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 180 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 239
++HGLC G +A LLE + +P++ TY L+ GL + A ++L M +
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 240 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 299
I ++ + L E +++ M + C+P+++ + +++G C+ G+ EA
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
++LN M+A C P+A T+++++ G G +EA+ + ++ M + G S Y+ ++
Sbjct: 418 EILNRMIASG-CLPNAYTYSSLMKGFFKTGLCEEAVQV-WKEMDKTGCSRNKFCYSVLID 475
Query: 360 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVW---PS 416
GL + RV+EA V++ ML IG+ D+ Y+ +I GLC +D A + + +++ P
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK 535
Query: 417 NIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVID 464
+ D Y ++ GLC I AV L ++D G P+++ N ++
Sbjct: 536 SQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 185/344 (53%), Gaps = 3/344 (0%)
Query: 170 LTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKAR 229
++P+ +S+N ++ LCK RA ++ + LP +TY L++GLC E +++A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 230 KVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGF 289
+L M S+ I N+ + LC + T + ++ M C P+ +T NT+I+G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 290 CKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSP 349
C G++++A+ +L MV+ K C P+ VT+ T+I GL+ R +A+ LL M +RGY
Sbjct: 303 CLKGKLDKAVSLLERMVSSK-CIPNDVTYGTLINGLVKQRRATDAVRLLSS-MEERGYHL 360
Query: 350 GIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 409
Y+ ++ GLF+ + EEA ++ M G + Y++++DGLC + +EAK
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 410 DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKL 469
+ ++ + + Y Y++++KG ++G EAV E+ +G + N CY+V+IDG C +
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 470 SMKREAYQILREMRKNGLNPDAVTW-RILDKLHGNRGNDFGLRI 512
+EA + +M G+ PD V + I+ L G D L++
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 202/416 (48%), Gaps = 9/416 (2%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+ LC L V A ++F M R +P+ +Y TL+ G C+ +D A + DEM+ G
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ + Y+VL+ G+ + D+ R L+ ++ + N + L+ LC +G +
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK-----GCVPNEVTYNTLIHGLCLKGKL 308
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
++ + E M K + + G +I+ L + R A R++ M +RG + Y+ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ GL K G A L + + G P+ Y VLV+GLC E +A+++L M++
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
+ + ++ E + V M +T C + + +I+G C +GR++EA+
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQR--GYSPGIVTYNAVL 358
V + M+ PD V +++II GL +G + AL L ++++ Q P +VTYN +L
Sbjct: 489 VWSKMLTIGI-KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 359 RGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCE-SNQLDEAKRFWDDIV 413
GL + + A ++ N ML G D T ++ L E SN D+ + F +++V
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 211/438 (48%), Gaps = 34/438 (7%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
MD LC R+ EA L +M+S G P+ V Y LI G C+ G++ K+ D M G
Sbjct: 229 MDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGC 288
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+PN +TY+ L+ G+ +++A L ERM + + N+ + L++ L ++
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKA----VSLLERMVSSKCIP-NDVTYGTLINGLVKQRRA 343
Query: 121 NEVFRIAEDMPQ-GKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 179
+ R+ M + G +N+ +I L + G+ A + M ++G P++V Y+
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIY-SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Query: 180 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 239
+V GLC+ G A ++L I G LP+ +TY L++G E+A +V + M K
Sbjct: 403 LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM-DKT 461
Query: 240 DVDRTRIC-NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEA 298
R + C ++ + LC + E + V ML +PD + +++I G C +G ++ A
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 299 LKVLNDMVAGK--FCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNA 356
LK+ ++M+ + PD VT+ ++ GL I A++LL ++ RG P ++T N
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML-DRGCDPDVITCNT 580
Query: 357 VLRG---------------------LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDG 395
L L + +RV A + MLG + ++T+A+++
Sbjct: 581 FLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVRE 640
Query: 396 LCESNQLDEA-KRFWDDI 412
+C+ +++ A + W ++
Sbjct: 641 ICKPKKINAAIDKCWRNL 658
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 234/485 (48%), Gaps = 10/485 (2%)
Query: 22 SRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVE 81
SRG+ P+ S+ +++ C+ G++ A + M G P+ ++Y+ L+ G R D+
Sbjct: 49 SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR 108
Query: 82 RANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFA 141
A++++ L R + +F +L + + ++EVF M + S N
Sbjct: 109 SASLVLESL--RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNV-VT 165
Query: 142 CGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGI 201
ID+ C+SG A + + M++ L+P++V++ ++ G CK G A L +E
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 202 QFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPT 261
+ + TY L++G C + ++++A ++ M+ + + + + +
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 262 ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 321
+ L ML + D+ +I+G C G+++EA +++ DM PD V FTT+
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL-VPDMVIFTTM 344
Query: 322 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG 381
+ GR++ A+N+ Y + +RG+ P +V + ++ G+ + ++ EA V+ C+
Sbjct: 345 MNAYFKSGRMKAAVNM-YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEK-- 400
Query: 382 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 441
A+ Y ++ID LC+ E +R + I + D ++Y + I GLC+ G + +A
Sbjct: 401 --ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 442 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 501
+V G+ +++ Y +I G + EA Q+ EM +G++PD+ + +L + +
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Query: 502 GNRGN 506
GN
Sbjct: 519 EKEGN 523
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 173/378 (45%), Gaps = 35/378 (9%)
Query: 120 VNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 179
V E + + + ++ + F C I L S + + + + RG TP S+NS
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 180 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 239
+V +CK G A ++ +FG P +Y L++G C D+ A VL+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL---- 117
Query: 240 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 299
R + ++ C+PD+++ N++ NGF KM ++E
Sbjct: 118 -----RASHGFI-----------------------CKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
+ M+ K C+P+ VT++T I G +Q AL + M + SP +VT+ ++
Sbjct: 150 VYMGVML--KCCSPNVVTYSTWIDTFCKSGELQLALKSFHS-MKRDALSPNVVTFTCLID 206
Query: 360 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
G + +E A ++ M + + + TY +IDG C+ ++ A+ + +V
Sbjct: 207 GYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQIL 479
++ VY +I G + G A+ FL ++++ G+ +I Y V+I G C +EA +I+
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 480 REMRKNGLNPDAVTWRIL 497
+M K+ L PD V + +
Sbjct: 327 EDMEKSDLVPDMVIFTTM 344
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 176/362 (48%), Gaps = 16/362 (4%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D C + A K F MK PNVV++T LI GYC+ G+++VA ++ EMR +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
N +TY+ L+ G + +++RA +++ RM E+ + N+ + ++D + G
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAE----EMYSRMVEDR-VEPNSLVYTTIIDGFFQRGDS 284
Query: 121 NEVFR-IAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 179
+ + +A+ + QG ++ A G +I LC +G+ A+ +V M K L P +V + +
Sbjct: 285 DNAMKFLAKMLNQGMRLDIT-AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 180 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSK- 238
+++ K G A + + I+ G+ P +++G+ L +A ++ F + K
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKA 401
Query: 239 KDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEA 298
DV T + + ALC + E+ + + + PD + I G CK G + +A
Sbjct: 402 NDVMYT----VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 299 LKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVL 358
K+ MV D + +TT+I+GL + G + EA ++ M G SP ++ ++
Sbjct: 458 FKLKTRMVQEGLLL-DLLAYTTLIYGLASKGLMVEARQ-VFDEMLNSGISPDSAVFDLLI 515
Query: 359 RG 360
R
Sbjct: 516 RA 517
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%)
Query: 404 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 463
EA +F + SN+ D + I L S ++ FL LV G TP+ +N V+
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 464 DGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 506
CKL + A I+ M + G PD +++ L H G+
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 231/493 (46%), Gaps = 6/493 (1%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC + A + MK G ++YT +I G C+ G +D A + +EM G+
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ +TYS L+ G + + A ++ +++ LS N ++ L+ + CR G +
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-----VGLSPNGIIYSTLIYNCCRMGCL 489
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
E RI E M + F ++ SLC++G+ A + M G+ P+ VS++ +
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
++G G ++A+ + +E + G+ P+ TY L++GLC L +A K L+ + +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
T + N L A+C N + +++ M+Q PD T ++I+G C+ G+ A+
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ A P+ V +T + G+ G+ + + Q M G++P IVT NA++ G
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ-MDNLGHTPDIVTTNAMIDG 728
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
R+ ++E+ ++ M + TTY I++ G + + + + I+ + D
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
+++ G+C S + + L + GV + +N++I C A+ +++
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 481 EMRKNGLNPDAVT 493
M G++ D T
Sbjct: 849 VMTSLGISLDKDT 861
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 232/528 (43%), Gaps = 41/528 (7%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC ++ L M+ G+ P +V+Y T++H YC+ G A ++ D M+ GV
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 259
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEED--------------------- 99
+ TY++L+ + R+ + + +L+ + +RM +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 319
Query: 100 ---------LSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLC 150
LS N+ F L+D EG E ++ M E + G ++D LC
Sbjct: 320 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379
Query: 151 RSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEH 210
++ A M++ G+ ++Y ++ GLCK+G A LL E + G P
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 439
Query: 211 TYKVLVEGLCGESDLEKARKVL----QFMLSKKDVDRTRICNIYLRALCLIKNPTELLNV 266
TY L+ G C + A++++ + LS + + + R CL K +
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL-KEAIRIYEA 498
Query: 267 LVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLL 326
++ T+ D T N ++ CK G++ EA + + M + P+ V+F +I G
Sbjct: 499 MILEGHTR---DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI-LPNTVSFDCLINGYG 554
Query: 327 NVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADS 386
N G +A + ++ M + G+ P TY ++L+GL + + EA++ + + D+
Sbjct: 555 NSGEGLKAFS-VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613
Query: 387 TTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYE 446
Y ++ +C+S L +A + ++V S + D+Y Y ++I GLCR GK A+ F E
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673
Query: 447 LVDSG-VTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVT 493
G V PN V Y +DG K + +M G PD VT
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 243/524 (46%), Gaps = 44/524 (8%)
Query: 10 VGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSV 69
+ ++ ++F M G P+V + ++ ++GE + EM + P+ T+++
Sbjct: 139 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198
Query: 70 LVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAED 129
L+ + E+++ LM K+ E+ + + ++ C++G + +
Sbjct: 199 LINVLCAEGSFEKSSYLMQKM-----EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 130 MPQGKSVNEEFACGHM-IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M + K V+ + +M I LCRS R ++ MRKR + P+ V+YN++++G G
Sbjct: 254 M-KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
+ A QLL E + FG P+ T+ L++G E + ++A K+ M +K
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372
Query: 249 IYLRALC---------------------------------LIKNP--TELLNVLVFMLQT 273
+ L LC L KN E + +L M +
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432
Query: 274 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 333
PD++T + +INGFCK+GR + A +++ + +P+ + ++T+I+ +G ++E
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL-SPNGIIYSTLIYNCCRMGCLKE 491
Query: 334 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 393
A+ +Y+ M G++ T+N ++ L + +V EA+E CM G++ ++ ++ +I
Sbjct: 492 AIR-IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 394 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 453
+G S + +A +D++ + + Y +++KGLC+ G + EA FL L
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610
Query: 454 PNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
+ V YN ++ CK +A + EM + + PD+ T+ L
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 215/496 (43%), Gaps = 8/496 (1%)
Query: 3 QLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLP 62
LC +V EA + M S G +PN VS+ LI+GY +GE A+ VFDEM G P
Sbjct: 517 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576
Query: 63 NSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNE 122
TY L++G+ + + A + L +V+ + L+ ++C+ G + +
Sbjct: 577 TFFTYGSLLKGLCKGGHLREAEKFLKSL-----HAVPAAVDTVMYNTLLTAMCKSGNLAK 631
Query: 123 VFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRG-LTPSLVSYNSIV 181
+ +M Q + + + +I LCR G+ A RG + P+ V Y V
Sbjct: 632 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691
Query: 182 HGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDV 241
G+ K G E+ G+ P T +++G +EK +L M ++
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 751
Query: 242 DRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKV 301
NI L K+ + + ++ PD +T ++++ G C+ +E LK+
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 302 LNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGL 361
L + + D TF +I G I A +L+ +VM G S T +A++ L
Sbjct: 812 LKAFIC-RGVEVDRYTFNMLISKCCANGEINWAFDLV-KVMTSLGISLDKDTCDAMVSVL 869
Query: 362 FRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDN 421
R R +E++ V + M G+ +S Y +I+GLC + A ++++ N
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 422 YVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILRE 481
+AM++ L + GK EA L ++ + P I + ++ CK EA ++
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989
Query: 482 MRKNGLNPDAVTWRIL 497
M GL D V++ +L
Sbjct: 990 MSNCGLKLDLVSYNVL 1005
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 206/444 (46%), Gaps = 49/444 (11%)
Query: 103 NNAAFANLVDSLCREGYVN---EVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGAS 159
N + + L+ REG + E+FR+ SV + C ++ S+ +SG +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSV---YTCNAILGSVVKSGEDVSVW 178
Query: 160 RVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGL 219
+ M KR + P + ++N +++ LC G ++ L+++ + GY P+ TY ++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 220 CGESDLEKARKVLQFMLSKK-DVDRTRIC--NIYLRALCLIKNPTELLNVLVFMLQTQCQ 276
C + + A ++L M SK D D +C N+ + LC + +L M +
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDAD---VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 277 PDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALN 336
P+ +T NT+INGF G++ A ++LN+M++ +P+ VTF +I G ++ G +EAL
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL-SPNHVTFNALIDGHISEGNFKEALK 354
Query: 337 LLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGL 396
+ Y +M +G +P V+Y +L GL + + A+ + M GV TY +IDGL
Sbjct: 355 MFY-MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413
Query: 397 CESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGK-------------------- 436
C++ LDEA +++ D Y+A+I G C+ G+
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473
Query: 437 ---------------IHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILRE 481
+ EA+ ++ G T + +NV++ CK EA + +R
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 533
Query: 482 MRKNGLNPDAVTWRILDKLHGNRG 505
M +G+ P+ V++ L +GN G
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSG 557
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/577 (22%), Positives = 229/577 (39%), Gaps = 78/577 (13%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC + EA L +M G P++V+Y+ LI+G+C+ G A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 61 LPNSLTYSVLVRGVLR-------------------TRDVERANVLMFKL----------- 90
PN + YS L+ R TRD NVL+ L
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 91 WERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLC 150
+ R + + N +F L++ G + F + ++M + F G ++ LC
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 151 RSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEH 210
+ G A + + + V YN+++ +CK G +A L E +Q LP +
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 211 TYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIK---NPTELLNVL 267
TY L+ GLC K + V+ + +K+ R + + C + + +
Sbjct: 650 TYTSLISGLC-----RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 268 VFMLQTQC---QPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 324
F Q PD++T N +I+G+ +MG+IE+ +L +M + P+ T+ ++ G
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHG 763
Query: 325 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGL---------------FRLRRVEE 369
+ + LLY+ + G P +T ++++ G+ F R VE
Sbjct: 764 YSKRKDVSTSF-LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 370 AKEVFN--------------------CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFW 409
+ FN M +G+ D T ++ L +++ E++
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 410 DDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKL 469
++ ++ Y +I GLCR G I A E++ + P V + ++ K
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 470 SMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 506
EA +LR M K L P ++ L L GN
Sbjct: 943 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 979
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 213/519 (41%), Gaps = 47/519 (9%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + EA K + + + V Y TL+ C++G + A +F EM +LP+
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
S TY+ L+ G+ R + V+ + + ++ N + VD + + G
Sbjct: 648 SYTYTSLISGLCR----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 703
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
E M + MID R G+ + ++ M + P+L +YN ++HG
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQ-FMLSKKDVD 242
K ++ L I G LP + T LV G+C + LE K+L+ F+ +VD
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 243 RTRICNIYLRALC----------LIKNPTEL---------------LN----------VL 267
R N+ + C L+K T L LN VL
Sbjct: 824 RYTF-NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 268 VFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLN 327
M + P+ +ING C++G I+ A V +M+A K C P+ V + ++ L
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN-VAESAMVRALAK 941
Query: 328 VGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADST 387
G+ EA LL + M + P I ++ ++ + V EA E+ M G+ D
Sbjct: 942 CGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000
Query: 388 TYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKG-LCRSGKIHEAVHFLYE 446
+Y ++I GLC + A ++++ + + Y A+I+G L R A L +
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKD 1060
Query: 447 LVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKN 485
L+ G I ++ D L M E + L+ +K+
Sbjct: 1061 LLARGF---ITSMSLSQDSHRNLKMAMEKLKALQSNKKD 1096
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 276 QPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEAL 335
P V T N ++ K G L +M+ K C PD TF +I L G +++
Sbjct: 155 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKIC-PDVATFNILINVLCAEGSFEKS- 212
Query: 336 NLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDG 395
+ L Q M + GY+P IVTYN VL + R + A E+ + M GV AD TY ++I
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI-- 270
Query: 396 LCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPN 455
HD LCRS +I + L ++ + PN
Sbjct: 271 -----------------------HD----------LCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 456 IVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 506
V YN +I+G A Q+L EM GL+P+ VT+ L H + GN
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
M C V EA +L M + G ++VSY LI G C G+M +A+++++EM+ G
Sbjct: 971 MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030
Query: 61 LPNSLTYSVLVRGVL-RTRDVERANVLMFKLWER 93
L N+ TY L+RG+L R A++++ L R
Sbjct: 1031 LANATTYKALIRGLLARETAFSGADIILKDLLAR 1064
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 225/491 (45%), Gaps = 80/491 (16%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
M+ C S+ A M G P++V++T+LI+G+C M+ A + ++M G+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ + Y+ ++ DSLC+ G+V
Sbjct: 174 KPDVVMYTTII----------------------------------------DSLCKNGHV 193
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
N + + M + +++ LC SGR A ++ M KR + P ++++N++
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ K G + A +L E I+ P+ TY L+ G C E +++AR++ M +K
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG- 312
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
C PDV+ ++INGFCK ++++A+K
Sbjct: 313 ----------------------------------CFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ +M + K + +T+TT+I G VG+ A + + M RG P I TYN +L
Sbjct: 339 IFYEM-SQKGLTGNTITYTTLIQGFGQVGKPNVAQEV-FSHMVSRGVPPNIRTYNVLLHC 396
Query: 361 LFRLRRVEEAKEVFNCMLG---IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSN 417
L +V++A +F M GV + TY +++ GLC + +L++A ++D+
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 418 IHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQ 477
Y +I+G+C++GK+ AV+ L GV PN+V Y +I G + +K EA+
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 478 ILREMRKNGLN 488
+ R+M+++G++
Sbjct: 517 LFRKMKEDGVS 527
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 201/432 (46%), Gaps = 18/432 (4%)
Query: 65 LTYSVLVRGVLRTRDVERANV--LMFK----LWERMKEEEDLSVNNAAFANLVDSLCREG 118
L S VR R++ R + L F L+ M E L + F L++ + +
Sbjct: 28 LDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLP-SIIDFTKLLNVIAKMK 86
Query: 119 YVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYN 178
+ V + + + ++ + C +++ C+S + + AS + M K G P +V++
Sbjct: 87 KFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFT 146
Query: 179 SIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSK 238
S+++G C A ++ + ++ G P Y +++ LC + A + M +
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 239 KDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEA 298
+ + LC + ++L M + + +PDVIT N +I+ F K G+ +A
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 299 LKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVL 358
++ N+M+ AP+ T+T++I G G + EA + Y +M +G P +V Y +++
Sbjct: 267 EELYNEMIRMSI-APNIFTYTSLINGFCMEGCVDEARQMFY-LMETKGCFPDVVAYTSLI 324
Query: 359 RGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVW---P 415
G + ++V++A ++F M G+ ++ TY +I G + + + A+ + +V P
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 416 SNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD---SGVTPNIVCYNVVIDGACKLSMK 472
NI Y ++ LC +GK+ +A+ ++ GV PNI YNV++ G C
Sbjct: 385 PNIR---TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 473 REAYQILREMRK 484
+A + +MRK
Sbjct: 442 EKALMVFEDMRK 453
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 2/259 (0%)
Query: 247 CNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMV 306
CN+ + C P + L M++ +PD++T ++INGFC R+EEA+ ++N MV
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 307 AGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRR 366
PD V +TTII L G + AL+L Q M G P +V Y +++ GL R
Sbjct: 170 EMGI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 367 VEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAA 426
+A + M + D T+ +ID + + +A+ +++++ S + + Y +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 427 MIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNG 486
+I G C G + EA Y + G P++V Y +I+G CK +A +I EM + G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 487 LNPDAVTWRILDKLHGNRG 505
L + +T+ L + G G
Sbjct: 348 LTGNTITYTTLIQGFGQVG 366
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 159/337 (47%), Gaps = 7/337 (2%)
Query: 169 GLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKA 228
G++ L + N +++ C+ A L + ++ G+ P T+ L+ G C + +E+A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 229 RKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVING 288
++ M+ + + +LC + L++ M +PDV+ +++NG
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 289 FCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYS 348
C GR +A +L M K PD +TF +I + G+ +A L Y M + +
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKI-KPDVITFNALIDAFVKEGKFLDAEEL-YNEMIRMSIA 279
Query: 349 PGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRF 408
P I TY +++ G V+EA+++F M G D Y +I+G C+ ++D+A +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 409 WDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACK 468
+ ++ + Y +I+G + GK + A +V GV PNI YNV++ C
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 469 LSMKREAYQILREMRK---NGLNPDAVTWRILDKLHG 502
++A I +M+K +G+ P+ T+ +L LHG
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVL--LHG 434
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 294 RIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLL--YQVMPQRGYSPGI 351
+ EAL + MV + P + FT ++ + + + +NL Q+M G S +
Sbjct: 52 QFNEALDLFTHMVESR-PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM---GVSHDL 107
Query: 352 VTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDD 411
T N ++ + + A M+ +G D T+ +I+G C N+++EA +
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 412 IVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSM 471
+V D +Y +I LC++G ++ A+ ++ + G+ P++V Y +++G C
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 472 KREAYQILREMRKNGLNPDAVTWRIL 497
R+A +LR M K + PD +T+ L
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNAL 253
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 354 YNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV 413
Y +LR + EA ++F M+ + + +++ + + + D D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 414 WPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKR 473
HD Y ++ C+S + + A FL +++ G P+IV + +I+G C +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 474 EAYQILREMRKNGLNPDAVTW-RILDKLHGNRGNDFGLRI 512
EA ++ +M + G+ PD V + I+D L N ++ L +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 231/490 (47%), Gaps = 11/490 (2%)
Query: 10 VGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSV 69
V A KL M +G VP +Y LI G C+ ++ A + EM GV ++ TYS+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 70 LVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAED 129
L+ G+L+ R+ + A L+ ++ +++ + + + +EG + + + +
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSH-----GINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 130 MPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGG 189
M + + A +I+ CR ++ M+KR + S +Y ++V G+C G
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 190 CMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNI 249
AY +++E I G P+ Y L++ S A +VL+ M + N
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 250 YLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGK 309
+ L K E + LV M++ +P+ T I+G+ + A K + +M +
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---R 549
Query: 310 FCA--PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRV 367
C P+ V T +I G++ EA + Y+ M +G TY ++ GLF+ +V
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSA-YRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 368 EEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAM 427
++A+E+F M G G+ D +Y ++I+G + + +A +D++V + +Y +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 428 IKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 487
+ G CRSG+I +A L E+ G+ PN V Y +IDG CK EA+++ EM+ GL
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 488 NPDAVTWRIL 497
PD+ + L
Sbjct: 729 VPDSFVYTTL 738
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/570 (22%), Positives = 241/570 (42%), Gaps = 80/570 (14%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGY--------------------- 39
+D LC + R+ +A L +M S G + +Y+ LI G
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 40 --------------CRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANV 85
+ G M+ A +FD M G++P + Y+ L+ G R ++V +
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 86 LMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHM 145
L+ ++ +R ++ ++ + +V +C G ++ + I ++M +
Sbjct: 404 LLVEMKKR-----NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 146 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 205
I + ++ R A RV+ M+++G+ P + YNS++ GL K A L E ++ G
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 206 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLN 265
P+ TY + G S+ A K ++ M + +C + C E +
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 266 VLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGL 325
M+ D T ++NG K ++++A ++ +M GK APD ++ +I G
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGF 637
Query: 326 LNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVAD 385
+G +Q+A ++ + M + G +P ++ YN +L G R +E+AKE+ + M G+ +
Sbjct: 638 SKLGNMQKASSI-FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 386 STTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV---- 441
+ TY +IDG C+S L EA R +D++ + D++VY ++ G CR + A+
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 442 ------------------------------HFLYELVDSGV----TPNIVCYNVVIDGAC 467
L L+D PN V YN++ID C
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 468 KLSMKREAYQILREMRKNGLNPDAVTWRIL 497
K A ++ +M+ L P +T+ L
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 221/497 (44%), Gaps = 12/497 (2%)
Query: 5 CGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNS 64
C V + ++L +MK R V + +Y T++ G C +G++D AY + EM G PN
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 65 LTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVF 124
+ Y+ L++ L+ A ++ + MK E+ ++ + + +L+ L + ++E
Sbjct: 453 VIYTTLIKTFLQNSRFGDA----MRVLKEMK-EQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 125 RIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGL 184
+M + F G I + A + V MR+ G+ P+ V +++
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 185 CKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRT 244
CK G + A + G L TY VL+ GL ++ A ++ + M K
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 245 RICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLND 304
+ + + N + ++ M++ P+VI N ++ GFC+ G IE+A ++L++
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 305 MVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRL 364
M K P+AVT+ TII G G + EA L+ M +G P Y ++ G RL
Sbjct: 688 MSV-KGLHPNAVTYCTIIDGYCKSGDLAEAFR-LFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 365 RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEA----KRFWDDIVWPSNIHD 420
VE A +F G + + + +I+ + + + + R D +
Sbjct: 746 NDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILR 480
+ Y MI LC+ G + A +++ ++ + P ++ Y +++G K+ + E + +
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 481 EMRKNGLNPDAVTWRIL 497
E G+ PD + + ++
Sbjct: 865 EAIAAGIEPDHIMYSVI 881
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 221/493 (44%), Gaps = 19/493 (3%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
+C + A+ + +M + G PNVV YTTLI + + A +V EM+ G+ P+
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
Y+ L+ G+ + + ++ A + ++ E L N + +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVEN-----GLKPNAFTYGAFISGYIEASEFASA 541
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ ++M + + + C +I+ C+ G+ A M +G+ +Y +++G
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
L K+ A ++ E G P +Y VL+ G +++KA + M+ +
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 244 TRICNIYLRALCL---IKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
I N+ L C I+ ELL+ M P+ +T T+I+G+CK G + EA +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDE---MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+ ++M K PD+ +TT++ G + ++ A+ + ++G + +NA++
Sbjct: 719 LFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAITIFGT--NKKGCASSTAPFNALINW 775
Query: 361 LFRLRRVEEAKEVFNCMLGIGV----VADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS 416
+F+ + E EV N ++ + TY I+ID LC+ L+ AK + + +
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 417 NIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAY 476
+ Y +++ G + G+ E E + +G+ P+ + Y+V+I+ K M +A
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 477 QILREM-RKNGLN 488
++ +M KN ++
Sbjct: 896 VLVDQMFAKNAVD 908
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 215/482 (44%), Gaps = 20/482 (4%)
Query: 4 LCGLS---RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+ GLS R+ EA +M G PN +Y I GY E A K EMR CGV
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
LPN VL G++ ++ V+ R ++ + + + L++ L + V
Sbjct: 554 LPNK----VLCTGLINEY-CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 121 NEVFRIAEDMPQGKSVNEE-FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNS 179
++ I +M +GK + + F+ G +I+ + G AS + M + GLTP+++ YN
Sbjct: 609 DDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 180 IVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 239
++ G C+ G +A +LL+E G P+ TY +++G C DL +A ++ M K
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 240 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 299
V + + + C + N E + + C N +IN K G+ E
Sbjct: 728 LVPDSFVYTTLVDGCCRL-NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 300 KVLNDMVAG---KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNA 356
+VLN ++ G +F P+ VT+ +I L G ++ A L +Q M P ++TY +
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ-MQNANLMPTVITYTS 845
Query: 357 VLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPS 416
+L G ++ R E VF+ + G+ D Y+++I+ + +A D + +
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 417 NIHDNYVYA-----AMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSM 471
+ D + A++ G + G++ A + +V P+ +I+ +C S
Sbjct: 906 AVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Query: 472 KR 473
+R
Sbjct: 966 QR 967
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 194/415 (46%), Gaps = 53/415 (12%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
M+ L +V +A ++F +M+ +G P+V SY LI+G+ + G M A +FDEM G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN + Y++L+ G R+ ++E+A L+ ++ + L N + ++D C+ G +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEM-----SVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
E FR+ ++M V + F ++D CR A ++ K+G S +N++
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI-TIFGTNKKGCASSTAPFNAL 772
Query: 181 VHGLCKHGGCMRAYQLLEEGI-----QFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 235
++ + K G ++L + +FG P++ TY ++++ LC E +LE A+++ M
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 236 LSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRI 295
+ P VIT +++NG+ KMGR
Sbjct: 832 QN-----------------------------------ANLMPTVITYTSLLNGYDKMGRR 856
Query: 296 EEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPG----I 351
E V ++ +A PD + ++ II L G +AL L+ Q+ + G I
Sbjct: 857 AEMFPVFDEAIAAGI-EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 352 VTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLC-ESNQLDEA 405
T A+L G ++ +E A++V M+ + + DS T +I+ C SNQ EA
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 215/481 (44%), Gaps = 21/481 (4%)
Query: 26 VPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANV 85
VP + L+ R +D+ + V+ M V+ + TY +L+ R +V+
Sbjct: 183 VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD 242
Query: 86 LMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHM 145
++FK KE ++N V+ ++ E M V ++ +
Sbjct: 243 VLFK---TEKEFRTATLN----------------VDGALKLKESMICKGLVPLKYTYDVL 283
Query: 146 IDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY 205
ID LC+ R A ++ M G++ +Y+ ++ GL K A L+ E + G
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 206 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLN 265
+ Y + + E +EKA+ + M++ + + + + C KN +
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 266 VLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGL 325
+LV M + T TV+ G C G ++ A ++ +M+A C P+ V +TT+I
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTF 462
Query: 326 LNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVAD 385
L R +A+ +L + M ++G +P I YN+++ GL + +R++EA+ M+ G+ +
Sbjct: 463 LQNSRFGDAMRVLKE-MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 386 STTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLY 445
+ TY I G E+++ A ++ ++ + + + +I C+ GK+ EA
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 446 ELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRG 505
+VD G+ + Y V+++G K +A +I REMR G+ PD ++ +L G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 506 N 506
N
Sbjct: 642 N 642
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 47/277 (16%)
Query: 257 IKNPTELLNVLVFM-LQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDA 315
+ +P++LL+ ++ Q + + + + + C G E+AL V+ M+ + P A
Sbjct: 74 VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW--PVA 131
Query: 316 VTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFN 375
+++I+ R + G S V + + G +EEA VF+
Sbjct: 132 EVWSSIV-------RCSQEF---------VGKSDDGVLFGILFDGYIAKGYIEEAVFVFS 175
Query: 376 CMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWD---DIVWPSNIHDNYVYAAMIKGLC 432
+G+ +V + +++D L N+LD FWD +V + + D Y +I C
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLD---LFWDVYKGMVERNVVFDVKTYHMLIIAHC 232
Query: 433 RSGKIHEAVHFLYE---------------------LVDSGVTPNIVCYNVVIDGACKLSM 471
R+G + L++ ++ G+ P Y+V+IDG CK+
Sbjct: 233 RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKR 292
Query: 472 KREAYQILREMRKNGLNPDAVTWRIL-DKLHGNRGND 507
+A +L EM G++ D T+ +L D L R D
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 250/533 (46%), Gaps = 50/533 (9%)
Query: 12 EAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLV 71
+A +L +M S G NVV+ T+LI G+C+ ++ A +FD+M G PNS+T+SVL+
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 72 RGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFA--NLVDSLCREGYVNEVFRIAED 129
+ ++E+A E K+ E L + + F ++ + E ++ ++
Sbjct: 382 EWFRKNGEMEKA-------LEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
Query: 130 MPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGG 189
+ N F C ++ LC+ G+ A+ ++ M RG+ P++VSYN+++ G C+
Sbjct: 435 SFETGLANV-FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 190 CMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNI 249
A + ++ G P+ +TY +L++G D + A +V+ M S +
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 250 YLRALCLIKNPTELLNVLVFMLQTQ--CQPDVITLNTVINGFCKMGRIEEALKVLNDMVA 307
+ LC + ++ +L M++ + C ++ N++I+GF K G ++ A+ +M
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCV-SCMSYNSIIDGFFKEGEMDSAVAAYEEM-C 611
Query: 308 GKFCAPDAVTFTTIIFGLLNVGRIQEALNL------------------------------ 337
G +P+ +T+T+++ GL R+ +AL +
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671
Query: 338 ----LYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 393
L+ + + G +P YN+++ G L + A +++ ML G+ D TY +I
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 394 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 453
DGL + L A + ++ + D +Y ++ GL + G+ + V E+ + VT
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 454 PNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 506
PN++ YN VI G + EA+++ EM G+ PD T+ IL + G GN
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL--VSGQVGN 842
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 195/393 (49%), Gaps = 8/393 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC + EA +L M+SRG PNVVSY ++ G+CR MD+A VF + G+ PN
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+ TYS+L+ G R D + A ++ M ++ VN + +++ LC+ G ++
Sbjct: 513 NYTYSILIDGCFRNHDEQNA----LEVVNHMT-SSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 124 FRIAEDMPQGKSVNEE-FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVH 182
+ +M + K + + +ID + G A M G++P++++Y S+++
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 183 GLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVD 242
GLCK+ +A ++ +E G Y L++G C S++E A + +L +
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 243 RTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVL 302
I N + + N L++ ML+ + D+ T T+I+G K G + A ++
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 303 NDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLF 362
+M A PD + +T I+ GL G+ + + +++ M + +P ++ YNAV+ G +
Sbjct: 748 TEMQAVGLV-PDEIIYTVIVNGLSKKGQFVKVVK-MFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 363 RLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDG 395
R ++EA + + ML G++ D T+ I++ G
Sbjct: 806 REGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 231/522 (44%), Gaps = 43/522 (8%)
Query: 12 EAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLV 71
EA +L+ M + G + V+ L+ R + A +V G P+SL YS+ V
Sbjct: 216 EAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAV 275
Query: 72 RGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDM- 130
+ +T D+ AN L+ MKE++ + + +++ + ++G +++ R+ ++M
Sbjct: 276 QACCKTLDLAMANSLL----REMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 131 PQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGC 190
G S+N A +I C++ A + M K G +P+ V+++ ++ K+G
Sbjct: 332 SDGISMN-VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEM 390
Query: 191 MRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIY 250
+A + ++ G PS +++G E+A K+ + + +CN
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF-ETGLANVFVCNTI 449
Query: 251 LRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCK-----MGRI---------- 295
L LC E +L M P+V++ N V+ G C+ + RI
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 296 --------------------EEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEAL 335
+ AL+V+N M + + V + TII GL VG+ +A
Sbjct: 510 KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV-NGVVYQTIINGLCKVGQTSKAR 568
Query: 336 NLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDG 395
LL ++ ++ ++YN+++ G F+ ++ A + M G G+ + TY +++G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 396 LCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPN 455
LC++N++D+A D++ D Y A+I G C+ + A EL++ G+ P+
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 456 IVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
YN +I G L A + ++M K+GL D T+ L
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
M+ LC +R+ +A ++ +MK++G ++ +Y LI G+C+ M+ A +F E+ G+
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ Y+ L+ G ++ V L+++M ++ L + + L+D L ++G +
Sbjct: 686 NPSQPIYNSLISGFRNLGNM----VAALDLYKKML-KDGLRCDLGTYTTLIDGLLKDGNL 740
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ +M V +E +++ L + G+ ++ M+K +TP+++ YN++
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCG 221
+ G + G A++L +E + G LP T+ +LV G G
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVG 841
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 133/329 (40%), Gaps = 36/329 (10%)
Query: 159 SRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEG 218
S++V + G + ++N +++ K A ++ + ++ +P +
Sbjct: 148 SKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSA 207
Query: 219 LCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPD 278
L + L +A+++ M++ + +RA + P E L VL ++ +PD
Sbjct: 208 LVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPD 267
Query: 279 VITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLL 338
+ + + CK + A +L +M K C P T+T++I + G + +A+
Sbjct: 268 SLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAI--- 324
Query: 339 YQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCE 398
RL+ + ML G+ + +I G C+
Sbjct: 325 ------------------------RLK---------DEMLSDGISMNVVAATSLITGHCK 351
Query: 399 SNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVC 458
+N L A +D + ++ ++ +I+ ++G++ +A+ F ++ G+TP++
Sbjct: 352 NNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFH 411
Query: 459 YNVVIDGACKLSMKREAYQILREMRKNGL 487
+ +I G K EA ++ E + GL
Sbjct: 412 VHTIIQGWLKGQKHEEALKLFDESFETGL 440
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 16/249 (6%)
Query: 259 NPTELLNVLVFMLQTQCQP-----DVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAP 313
NPT + +VLV L + + N ++N + K + + A+ ++N M+
Sbjct: 138 NPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLE-----L 192
Query: 314 DAVTF----TTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEE 369
D + F + L+ + EA L Y M G VT ++R R + E
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKEL-YSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251
Query: 370 AKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSN-IHDNYVYAAMI 428
A EV + + G DS Y++ + C++ L A ++ + Y ++I
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 429 KGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLN 488
+ G + +A+ E++ G++ N+V +I G CK + A + +M K G +
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 489 PDAVTWRIL 497
P++VT+ +L
Sbjct: 372 PNSVTFSVL 380
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 227/501 (45%), Gaps = 16/501 (3%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D L G +R+ + ++ DMK G PNV +Y L+ C+ ++D A K+ EM + G
Sbjct: 153 LDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGC 212
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P++++Y+ ++ + V+ +L ER E +SV NA L++ LC+E
Sbjct: 213 CPDAVSYTTVISSMCEVGLVKEGR----ELAERF--EPVVSVYNA----LINGLCKEHDY 262
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
F + +M + + +I+ LC SG+ A + M KRG P++ + +S+
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 181 VHGLCKHGGCMRAYQLLEEGIQ-FGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKK 239
V G G A L + I+ FG P+ Y LV+G C ++ KA V M
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 240 DVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEAL 299
R + + + + ML + C P+V+ ++ C+ + +EA
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA- 441
Query: 300 KVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLR 359
+ L ++++ + CAP TF I GL + GR+ A + Q+ Q P IVTYN +L
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Query: 360 GLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIH 419
GL + R+EEA + + GV S+TY ++ G C + A + ++
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Query: 420 DNYVYAAMIKGLCRSGKIHEAVHFLYELVDSG---VTPNIVCYNVVIDGACKLSMKREAY 476
D +I C+ GK A L +LV G P+++ Y VI G C+ + + +
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 620
Query: 477 QILREMRKNGLNPDAVTWRIL 497
+L M G+ P TW +L
Sbjct: 621 ILLERMISAGIVPSIATWSVL 641
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 228/487 (46%), Gaps = 30/487 (6%)
Query: 25 HVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMR----HCGVLPNSLTYSVLVRGVLRTRDV 80
H P +++ +I G++D + +M+ HC L SV+ V R +
Sbjct: 74 HTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCS---EDLFISVI--SVYRQVGL 126
Query: 81 ERANVLMFKLWERMKEEE-DLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEE 139
V MF R+KE D SV + +++D+L E + ++ + DM +
Sbjct: 127 AERAVEMFY---RIKEFGCDPSVK--IYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV 181
Query: 140 FACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEE 199
F ++ +LC++ + GA +++ M +G P VSY +++ +C+ G L++E
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-------LVKE 234
Query: 200 GIQFG--YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLI 257
G + + P Y L+ GLC E D + A ++++ M+ K + + LC
Sbjct: 235 GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294
Query: 258 KNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVT 317
+ L ML+ C P++ TL++++ G G +AL + N M+ G P+ V
Sbjct: 295 GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVA 354
Query: 318 FTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCM 377
+ T++ G + G I +A++ ++ M + G SP I TY +++ G + ++ A ++N M
Sbjct: 355 YNTLVQGFCSHGNIVKAVS-VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 378 LGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKI 437
L G + Y +++ LC ++ EA+ + + + + A IKGLC +G++
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 438 HEAVHFLYELVDSG-VTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRI 496
A ++ PNIV YN ++DG K + EAY + RE+ G+ + T+
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 497 LDKLHGN 503
L LHG+
Sbjct: 534 L--LHGS 538
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 162/364 (44%), Gaps = 45/364 (12%)
Query: 145 MIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFG 204
MI L G+ ++ M+ +G S + S++ + G RA ++ +FG
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141
Query: 205 YLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELL 264
PS Y +++ L GE+ RI IY+
Sbjct: 142 CDPSVKIYNHVLDTLLGEN---------------------RIQMIYM------------- 167
Query: 265 NVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFG 324
V M + +P+V T N ++ CK +++ A K+L +M + K C PDAV++TT+I
Sbjct: 168 -VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-SNKGCCPDAVSYTTVISS 225
Query: 325 LLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVA 384
+ VG ++E L + + P + YNA++ GL + + A E+ M+ G+
Sbjct: 226 MCEVGLVKEGRELAER------FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 385 DSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDN-YVYAAMIKGLCRSGKIHEAVHF 443
+ +Y+ +I+ LC S Q++ A F ++ H N Y ++++KG G +A+
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQML-KRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 444 LYELVDS-GVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 502
+++ G+ PN+V YN ++ G C +A + M + G +P+ T+ L
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 503 NRGN 506
RG+
Sbjct: 399 KRGS 402
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 19/240 (7%)
Query: 274 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKF-CAPDAVTFTTIIFGLLNVGRIQ 332
C D+ +VI+ + ++G E A+++ + +F C P + ++ LL RIQ
Sbjct: 108 HCSEDLFI--SVISVYRQVGLAERAVEMFYRI--KEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 333 EALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIV 392
+ ++Y+ M + G+ P + TYN +L+ L + +V+ AK++ M G D+ +Y V
Sbjct: 164 -MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222
Query: 393 IDGLCESNQLDE----AKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELV 448
I +CE + E A+RF + +V VY A+I GLC+ A + E+V
Sbjct: 223 ISSMCEVGLVKEGRELAERF-EPVV--------SVYNALINGLCKEHDYKGAFELMREMV 273
Query: 449 DSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGNDF 508
+ G++PN++ Y+ +I+ C A+ L +M K G +P+ T L K RG F
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 229/497 (46%), Gaps = 7/497 (1%)
Query: 10 VGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSV 69
+ EA LFF +++ G P+ S T L+ +T + V VF + P+ Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 70 LVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAED 129
++ ++ DV + +L+ RMK + + + + L+D LC+ +N+ ++ ++
Sbjct: 185 AIQAAVKLSDVGKG----LELFNRMKHDR-IYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 130 MPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGG 189
M + + +ID C++G + +V M+ + PSL+++N+++ GL K G
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 190 CMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNI 249
A +L+E G++P T+ +L +G E A V + + C+I
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 250 YLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGK 309
L ALC + +L + P+ + NT+I+G+C+ G + A + M +
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM-EKQ 418
Query: 310 FCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEE 369
PD + + +I +G ++ A + + M +G SP + TYN ++ G R ++
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNK-MKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 370 AKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIK 429
++ M G + + +Y +I+ LC+ ++L EA+ D+ +Y +I
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 430 GLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNP 489
G C GKI +A F E++ G+ N+V YN +IDG EA +L E+ + GL P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 490 DAVTWRILDKLHGNRGN 506
D T+ L +G GN
Sbjct: 598 DVFTYNSLISGYGFAGN 614
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 249/532 (46%), Gaps = 38/532 (7%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D LC R+ +A +LF +M +R +P++++Y TLI GYC+ G + ++KV + M+ +
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI 280
Query: 61 LPNSLTYSVLVRGVLRTRDVERA-NVL-----------------MFKLWERMKEEE---- 98
P+ +T++ L++G+ + VE A NVL +F + ++ E
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 99 --DLSVNNAAFAN------LVDSLCREGYVNEVFRI-AEDMPQGKSVNEEFACGHMIDSL 149
+ +V++ N L+++LC+EG + + I +M +G NE MID
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE-VIYNTMIDGY 399
Query: 150 CRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSE 209
CR G GA + M K+G+ P ++YN ++ C+ G A + + + G PS
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 210 HTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVF 269
TY +L+ G + + +K +L+ M + + LC E V
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 270 MLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVG 329
M P V N +I+G C G+IE+A + +M+ K + VT+ T+I GL G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK-KGIELNLVTYNTLIDGLSMTG 578
Query: 330 RIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTY 389
++ EA +LL ++ ++G P + TYN+++ G V+ ++ M G+ TY
Sbjct: 579 KLSEAEDLLLEI-SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 390 AIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVD 449
++I LC ++ +R + ++ ++ VY ++ G + +A + ++++
Sbjct: 638 HLLI-SLCTKEGIELTERLFGEMSLKPDL---LVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 450 SGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLH 501
+ + YN +I G K+ E ++ EM + P+A T+ I+ K H
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGH 745
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 226/506 (44%), Gaps = 42/506 (8%)
Query: 7 LSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLT 66
LS VG+ +LF MK P+V Y LI G C+ M+ A ++FDEM +LP+ +T
Sbjct: 192 LSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 67 YSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRI 126
Y+ L+ G + + E++ FK+ ERMK + + + F L+ L + G V + +
Sbjct: 252 YNTLIDGYCKAGNPEKS----FKVRERMKADH-IEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 127 AEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCK 186
++M V + F + D + + A V G+ + + + +++ LCK
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 187 HGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRI 246
G +A ++L + G +P+E Y +++G C + DL AR ++
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE------------- 413
Query: 247 CNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMV 306
M + +PD + N +I FC++G +E A K +N M
Sbjct: 414 ----------------------AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 307 AGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRR 366
K +P T+ +I G + ++L + M G P +V+Y ++ L + +
Sbjct: 452 L-KGVSPSVETYNILIGGYGRKYEFDKCFDILKE-MEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 367 VEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAA 426
+ EA+ V M GV Y ++IDG C ++++A RF +++ + Y
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 427 MIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNG 486
+I GL +GK+ EA L E+ G+ P++ YN +I G + + EM+++G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 487 LNPDAVTWRILDKLHGNRGNDFGLRI 512
+ P T+ +L L G + R+
Sbjct: 630 IKPTLKTYHLLISLCTKEGIELTERL 655
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 9/235 (3%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D L ++ EA L ++ +G P+V +Y +LI GY G + +++EM+ G+
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P TY +L+ L T++ +L ER+ E L + + ++ G +
Sbjct: 631 KPTLKTYHLLIS--LCTKE-------GIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM 681
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ F + + M + ++ +I + G+ ++ M R + P +YN I
Sbjct: 682 EKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 235
V G C+ M AY E + G+L LV GL E ++A V+ M
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 12 EAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLV 71
E L +M +R P +Y ++ G+C + AY + EM+ G L + + LV
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777
Query: 72 RGVLRTRDVERANVLMFKLWERM----KEEEDLSVN 103
G+ + A +++ ++ RM +EDLS
Sbjct: 778 SGLKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSAT 813
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 222/454 (48%), Gaps = 15/454 (3%)
Query: 38 GYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEE 97
G+ + + A+ +F EM H LP+ + ++ L+ T ++ R +++ + + E
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTA---TANLRRYETVIY--FSQKMEL 99
Query: 98 EDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHG 157
+S + +F L+ CR ++ + M + G ++ C R
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 158 ASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVE 217
A +V +M K G P++V YN+++ GLCK+G A +LL E + G TY L+
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 218 GLCGESDLEKARKVLQFMLSKKD----VDRTRICNIYLRALCLIKNPTELLNVLVFMLQT 273
GLC A ++L+ M+ + V T + +++++ N E + M+Q+
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ----GNLDEAQELYKEMIQS 275
Query: 274 QCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQE 333
P+ +T N++ING C GR+ +A K D++A K C P+ VT+ T+I G + E
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 334 ALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVI 393
+ L +Q M G++ I TYN ++ G ++ ++ A ++F M+ V D T+ I++
Sbjct: 335 GMKL-FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 394 DGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVT 453
GLC + +++ A +DD+ Y MI GLC++ K+ +A L GV
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 454 PNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 487
P+ Y ++I G CK +REA +++R M++ G+
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 185/390 (47%), Gaps = 15/390 (3%)
Query: 20 MKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRG---VLR 76
M+ G ++ S+T LIH +CR + A V +M G P+ +T+ L+ G V R
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 77 TRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSV 136
D +LM K N + L+D LC+ G +N + +M +
Sbjct: 157 IGDAFSLVILMVK--------SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
Query: 137 NEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQL 196
+ ++ LC SGR A+R++ M KR + P +V++ +++ K G A +L
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 197 LEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCL 256
+E IQ P+ TY ++ GLC L A+K M SK N + C
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 257 IKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAV 316
+ E + + M D+ T NT+I+G+C++G++ AL + MV+ + PD +
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR-VTPDII 387
Query: 317 TFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNC 376
T ++ GL G I+ AL + + M + GIV YN ++ GL + +VE+A E+F C
Sbjct: 388 THCILLHGLCVNGEIESAL-VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF-C 445
Query: 377 MLGI-GVVADSTTYAIVIDGLCESNQLDEA 405
L + GV D+ TY I+I GLC++ EA
Sbjct: 446 RLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 22/343 (6%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
C ++R+G+A L M G+ PNVV Y TLI G C+ GE+++A ++ +EM G+ +
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
+TY+ L+ G+ + A ++ + +R ++ + F L+D ++G ++E
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKR-----SINPDVVTFTALIDVFVKQGNLDEA 265
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
+ ++M Q +I+ LC GR + A + +M +G P++V+YN+++ G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 184 LCKHGGCMRAYQLLEEGIQF-------GYLPSEHTYKVLVEGLCGESDLEKARKVLQFML 236
CK +++++EG++ G+ TY L+ G C L A + +M+
Sbjct: 326 FCK-------FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 237 SKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIE 296
S++ I L LC+ L M +++ ++ N +I+G CK ++E
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 297 EALKVLNDM-VAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLL 338
+A ++ + V G PDA T+T +I GL G +EA L+
Sbjct: 439 KAWELFCRLPVEG--VKPDARTYTIMILGLCKNGPRREADELI 479
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 4/255 (1%)
Query: 248 NIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVA 307
I + C + L+VL M++ +P ++T ++++GFC + RI +A ++ MV
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 308 GKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRV 367
+ P+ V + T+I GL G + AL LL + M ++G +VTYN +L GL R
Sbjct: 170 SGY-EPNVVVYNTLIDGLCKNGELNIALELLNE-MEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 368 EEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAM 427
+A + M+ + D T+ +ID + LDEA+ + +++ S +N Y ++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 428 IKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGL 487
I GLC G++++A + G PN+V YN +I G CK M E ++ + M G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 488 NPDAVTWRILDKLHG 502
N D T+ L +HG
Sbjct: 348 NADIFTYNTL--IHG 360
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 287 NGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRG 346
GF R E+A + +MV + P V FT ++ N+ R E + Q M G
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQ-PLPSIVDFTRLLTATANLRR-YETVIYFSQKMELYG 101
Query: 347 YSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAK 406
S + ++ ++ R R+ A V M+ +G T+ ++ G C N++ +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 407 RFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGA 466
+V + VY +I GLC++G+++ A+ L E+ G+ ++V YN ++ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 467 CKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 506
C +A ++LR+M K +NPD VT+ L + +GN
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ LC R+ +A K F M S+G PNVV+Y TLI G+C+ +D K+F M G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+ TY+ L+ G + + R + +F + D+ + L+ LC G +
Sbjct: 348 NADIFTYNTLIHGYCQVGKL-RVALDIFCWMVSRRVTPDIITH----CILLHGLCVNGEI 402
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+DM + + A MI LC++ + A + + G+ P +Y +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 181 VHGLCKHGGCMRAYQLL----EEGI 201
+ GLCK+G A +L+ EEGI
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGI 487
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVL 61
LC +V +A +LF + G P+ +YT +I G C+ G A ++ M+ G++
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 221/476 (46%), Gaps = 77/476 (16%)
Query: 22 SRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVE 81
SR N Y ++ R ++D + +F M C LP+ +S L+ + + ++
Sbjct: 39 SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK---MK 95
Query: 82 RANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFA 141
+ +V+++ LWE+M+ + +LC
Sbjct: 96 KYDVVIY-LWEQMQ-----------MLGIPHNLC-------------------------T 118
Query: 142 CGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGI 201
C +++ CR + A + M K G PS+V++ S+++G C+ A + ++ +
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 202 QFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPT 261
GY P+ Y +++GLC K VD N
Sbjct: 179 GMGYKPNVVIYNTIIDGLC----------------KSKQVD----------------NAL 206
Query: 262 ELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 321
+LLN M + PDV+T N++I+G C GR +A ++++ M + PD TF +
Sbjct: 207 DLLNR---MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI-YPDVFTFNAL 262
Query: 322 IFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIG 381
I + GR+ EA Y+ M +R P IVTY+ ++ GL R++EA+E+F M+ G
Sbjct: 263 IDACVKEGRVSEAEEF-YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 382 VVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAV 441
D TY+I+I+G C+S +++ + + ++ + + Y +I+G CR+GK++ A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 442 HFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRIL 497
+V GV PNI+ YNV++ G C +A IL +M+KNG++ D VT+ I+
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 214/451 (47%), Gaps = 8/451 (1%)
Query: 9 RVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYS 68
++ ++ LFF M +P++ ++ L+ + + DV ++++M+ G+ N T +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 69 VLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAE 128
+L+ R + A + K+ + E ++ F +L++ CR V + + +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVT-----FGSLLNGFCRGDRVYDALYMFD 175
Query: 129 DMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHG 188
M +ID LC+S + A ++ M K G+ P +V+YNS++ GLC G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 189 GCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICN 248
A +++ + P T+ L++ E + +A + + M+ + +
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 249 IYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAG 308
+ + LC+ E + FM+ C PDV+T + +ING+CK ++E +K+ +M +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM-SQ 354
Query: 309 KFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVE 368
+ + VT+T +I G G++ A + ++ M G P I+TYN +L GL ++E
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEI-FRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 369 EAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMI 428
+A + M G+ AD TY I+I G+C++ ++ +A + + + D + Y M+
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 429 KGLCRSGKIHEAVHFLYELVDSGVTPNIVCY 459
GL + G EA ++ + G+ PN CY
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPN-ECY 503
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 184/385 (47%), Gaps = 7/385 (1%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
++ C S++ A M GH P++V++ +L++G+CR + A +FD+M G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
PN + Y+ ++ G+ +++ V+ A L RM E++ + + + +L+ LC G
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNA----LDLLNRM-EKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
++ R+ M + + + F +ID+ + GR A M +R L P +V+Y+ +
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
++GLC + A ++ + G P TY +L+ G C +E K+ M +
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
V T I ++ C + M+ P++IT N +++G C G+IE+AL
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+L DM A D VT+ II G+ G + +A + +Y + +G P I TY ++ G
Sbjct: 418 ILADMQKNGMDA-DIVTYNIIIRGMCKAGEVADAWD-IYCSLNCQGLMPDIWTYTTMMLG 475
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVAD 385
L++ EA +F M G++ +
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPN 500
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 5/206 (2%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
LC SR+ EA ++F M S+G P+VV+Y+ LI+GYC++ +++ K+F EM GV+ N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
++TY++L++G R + A +++ RM + N + L+ LC G + +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAE----EIFRRMV-FCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
I DM + + +I +C++G A + + +GL P + +Y +++ G
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSE 209
L K G A L + + G LP+E
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPNE 501
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 344 QRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLD 403
+R YS G Y +LR R +++++ ++F M+ + ++ ++ + + + D
Sbjct: 40 RRAYSNG-SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 404 EAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVI 463
W+ + H+ ++ CR ++ A+ FL +++ G P+IV + ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 464 DGACKLSMKREAYQILREMRKNGLNPDAVTWR-ILDKLHGNRGNDFGL 510
+G C+ +A + +M G P+ V + I+D L ++ D L
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 238/495 (48%), Gaps = 12/495 (2%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+ + L + + + F DM G P V +Y +I C+ G+++ A +F+EM+ G+
Sbjct: 234 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 293
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
+P+++TY+ ++ G + ++ V F+ + M E D+ NA L++ C+ G +
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDT-VCFFEEMKDMCCEPDVITYNA----LINCFCKFGKL 348
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+M + ++D+ C+ G A + MR+ GL P+ +Y S+
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ CK G A++L E +Q G + TY L++GLC +++A ++ M +
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
+ N + KN L +L + +PD++ T I G C + +IE A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 301 VLNDMVAGKFCA--PDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVL 358
V+N+M K C +++ +TT++ G E L+LL + M + +VT+ ++
Sbjct: 529 VMNEM---KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE-MKELDIEVTVVTFCVLI 584
Query: 359 RGLFRLRRVEEAKEVFNCMLG-IGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSN 417
GL + + V +A + FN + G+ A++ + +IDGLC+ NQ++ A ++ +V
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 418 IHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQ 477
+ D Y +++ G + G + EA+ ++ + G+ +++ Y ++ G + ++A
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704
Query: 478 ILREMRKNGLNPDAV 492
L EM G++PD V
Sbjct: 705 FLEEMIGEGIHPDEV 719
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 225/495 (45%), Gaps = 8/495 (1%)
Query: 4 LCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPN 63
L L + EA + F MK P S L+H + + G+ D + F +M G P
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261
Query: 64 SLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNEV 123
TY++++ + + DVE A L+E MK L + + +++D + G +++
Sbjct: 262 VFTYNIMIDCMCKEGDVEAAR----GLFEEMK-FRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 124 FRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHG 183
E+M + +I+ C+ G+ M+ GL P++VSY+++V
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 184 LCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDR 243
CK G +A + + + G +P+E+TY L++ C +L A ++ ML
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 244 TRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLN 303
+ LC + E + M P++ + N +I+GF K ++ AL++LN
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 304 DMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFR 363
++ G+ PD + + T I+GL ++ +I EA ++ M + G + Y ++ F+
Sbjct: 497 EL-KGRGIKPDLLLYGTFIWGLCSLEKI-EAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 364 LRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDN-Y 422
E + + M + + T+ ++IDGLC++ + +A +++ I + N
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 423 VYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREM 482
++ AMI GLC+ ++ A ++V G+ P+ Y ++DG K EA + +M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 483 RKNGLNPDAVTWRIL 497
+ G+ D + + L
Sbjct: 675 AEIGMKLDLLAYTSL 689
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 229/496 (46%), Gaps = 15/496 (3%)
Query: 1 MDQLCGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGV 60
+D +C V A LF +MK RG VP+ V+Y ++I G+ + G +D F+EM+
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 61 LPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYV 120
P+ +TY+ L+ + + + + + MK L N +++ LVD+ C+EG +
Sbjct: 329 EPDVITYNALINCFCKFGKLP----IGLEFYREMKGN-GLKPNVVSYSTLVDAFCKEGMM 383
Query: 121 NEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSI 180
+ + DM + V E+ +ID+ C+ G A R+ M + G+ ++V+Y ++
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 181 VHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKD 240
+ GLC A +L + G +P+ +Y L+ G ++++A ++L + +
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 241 VDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALK 300
+ ++ LC ++ V+ M + + + + T+++ + K G E L
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 301 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 360
+L++M VTF +I GL + +A++ ++ G + A++ G
Sbjct: 564 LLDEMKELDI-EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 361 LFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHD 420
L + +VE A +F M+ G+V D T Y ++DG + + EA D + D
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 421 NYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPN-IVCYNVV--------IDGACKLSM 471
Y +++ GL ++ +A FL E++ G+ P+ ++C +V+ ID A +L
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
Query: 472 KREAYQILREMRKNGL 487
+Q+L N L
Sbjct: 743 YLMKHQLLTSDNDNAL 758
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 165/342 (48%), Gaps = 2/342 (0%)
Query: 165 MRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESD 224
M++ + P S N ++H K G + ++ I G P+ TY ++++ +C E D
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 225 LEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNT 284
+E AR + + M + V T N + + + + M C+PDVIT N
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 285 VINGFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQ 344
+IN FCK G++ L+ +M G P+ V+++T++ G +Q+A+ Y M +
Sbjct: 338 LINCFCKFGKLPIGLEFYREM-KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF-YVDMRR 395
Query: 345 RGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDE 404
G P TY +++ ++ + +A + N ML +GV + TY +IDGLC++ ++ E
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 405 AKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVID 464
A+ + + I + Y A+I G ++ + A+ L EL G+ P+++ Y I
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 465 GACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHGNRGN 506
G C L A ++ EM++ G+ +++ + L + GN
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 139/299 (46%), Gaps = 8/299 (2%)
Query: 206 LPSEHTYKVLVEGLCGESDLEKARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPTELLN 265
+P + L L LE+A + M + +TR CN L + ++
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 266 VLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKF--CAPDAVTFTTIIF 323
M+ +P V T N +I+ CK G +E A + +M KF PD VT+ ++I
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM---KFRGLVPDTVTYNSMID 305
Query: 324 GLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNCMLGIGVV 383
G VGR+ + + ++ M P ++TYNA++ + ++ E + M G G+
Sbjct: 306 GFGKVGRLDDTV-CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 384 ADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGKIHEAVHF 443
+ +Y+ ++D C+ + +A +F+ D+ + + Y Y ++I C+ G + +A
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 444 LYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRILDKLHG 502
E++ GV N+V Y +IDG C +EA ++ +M G+ P+ ++ L +HG
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL--IHG 481
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Query: 311 CAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEA 370
C P F + L+++G ++EA+ ++ R + P + N +L +L + ++
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVF-PKTRSCNGLLHRFAKLGKTDDV 246
Query: 371 KEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKG 430
K F M+G G TY I+ID +C+ ++ A+ ++++ + + D Y +MI G
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 431 LCRSGKIHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPD 490
+ G++ + V F E+ D P+++ YN +I+ CK + REM+ NGL P+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 491 AVTWRIL 497
V++ L
Sbjct: 367 VVSYSTL 373
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,022,076
Number of Sequences: 539616
Number of extensions: 7979594
Number of successful extensions: 36485
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 22857
Number of HSP's gapped (non-prelim): 3779
length of query: 512
length of database: 191,569,459
effective HSP length: 122
effective length of query: 390
effective length of database: 125,736,307
effective search space: 49037159730
effective search space used: 49037159730
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)