Query 010344
Match_columns 512
No_of_seqs 180 out of 1225
Neff 10.5
Searched_HMMs 46136
Date Thu Mar 28 23:26:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010344.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010344hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 2.9E-78 6.2E-83 595.3 43.8 476 2-506 54-534 (537)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 2.6E-77 5.7E-82 585.1 45.9 465 3-504 50-522 (528)
3 PLN03052 acetate--CoA ligase; 100.0 3.3E-75 7.1E-80 611.5 52.4 509 2-512 217-728 (728)
4 KOG1177 Long chain fatty acid 100.0 4.6E-75 9.9E-80 533.0 36.3 487 3-509 87-592 (596)
5 PLN03051 acyl-activating enzym 100.0 4.3E-71 9.3E-76 563.1 49.0 488 24-512 1-499 (499)
6 PTZ00237 acetyl-CoA synthetase 100.0 1.5E-70 3.3E-75 573.3 46.3 493 2-504 101-623 (647)
7 COG0318 CaiC Acyl-CoA syntheta 100.0 1E-69 2.2E-74 554.6 45.7 469 3-504 48-527 (534)
8 PLN02654 acetate-CoA ligase 100.0 5E-69 1.1E-73 563.7 47.4 488 2-505 129-641 (666)
9 TIGR02316 propion_prpE propion 100.0 9.3E-68 2E-72 552.9 49.9 489 2-504 92-604 (628)
10 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2.8E-67 6.1E-72 550.1 47.8 487 2-505 97-603 (625)
11 PRK07788 acyl-CoA synthetase; 100.0 2.8E-67 6E-72 542.7 44.3 462 2-501 83-548 (549)
12 KOG1175 Acyl-CoA synthetase [L 100.0 3E-67 6.6E-72 514.4 41.6 490 3-505 106-603 (626)
13 PRK03584 acetoacetyl-CoA synth 100.0 1.5E-66 3.3E-71 546.7 48.3 487 2-505 123-626 (655)
14 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.9E-66 4.2E-71 543.4 47.8 486 2-504 123-626 (652)
15 PRK00174 acetyl-CoA synthetase 100.0 4.2E-66 9.1E-71 542.1 49.8 487 2-505 107-611 (637)
16 PRK07529 AMP-binding domain pr 100.0 1.5E-65 3.3E-70 535.7 48.1 479 2-504 67-570 (632)
17 PRK10524 prpE propionyl-CoA sy 100.0 2.6E-65 5.7E-70 535.6 49.2 489 2-504 93-605 (629)
18 PRK04319 acetyl-CoA synthetase 100.0 3.6E-65 7.7E-70 528.8 46.3 472 2-504 82-559 (570)
19 PRK06334 long chain fatty acid 100.0 2.2E-65 4.8E-70 525.4 43.4 466 2-506 54-537 (539)
20 PLN02860 o-succinylbenzoate-Co 100.0 3E-64 6.6E-69 520.7 45.4 480 2-509 41-559 (563)
21 PLN02736 long-chain acyl-CoA s 100.0 2E-64 4.4E-69 529.5 43.8 478 2-508 87-645 (651)
22 PLN02574 4-coumarate--CoA liga 100.0 4.2E-64 9E-69 519.4 45.0 471 2-507 75-557 (560)
23 PRK06060 acyl-CoA synthetase; 100.0 9.7E-64 2.1E-68 529.5 46.1 449 2-503 39-491 (705)
24 PRK13382 acyl-CoA synthetase; 100.0 1.1E-63 2.4E-68 513.5 44.9 456 2-500 77-536 (537)
25 PLN02614 long-chain acyl-CoA s 100.0 5.7E-64 1.2E-68 524.5 41.2 475 2-508 88-653 (666)
26 PRK13295 cyclohexanecarboxylat 100.0 8.1E-63 1.8E-67 508.9 48.7 474 2-504 64-544 (547)
27 PLN02246 4-coumarate--CoA liga 100.0 6.7E-63 1.4E-67 508.7 47.1 466 2-504 59-536 (537)
28 PRK05677 long-chain-fatty-acid 100.0 6.9E-63 1.5E-67 510.8 46.9 476 3-507 59-560 (562)
29 PRK07008 long-chain-fatty-acid 100.0 2.8E-62 6.1E-67 503.7 45.7 471 2-504 48-533 (539)
30 COG1021 EntE Peptide arylation 100.0 9.4E-64 2E-68 448.4 29.0 473 2-505 62-539 (542)
31 PRK08314 long-chain-fatty-acid 100.0 3.7E-62 8.1E-67 504.8 44.2 475 3-505 45-543 (546)
32 PLN02861 long-chain-fatty-acid 100.0 1.5E-62 3.3E-67 514.2 40.9 477 2-508 86-650 (660)
33 PRK07638 acyl-CoA synthetase; 100.0 7.1E-62 1.5E-66 495.4 43.6 448 2-506 35-483 (487)
34 PRK09274 peptide synthase; Pro 100.0 4.9E-62 1.1E-66 504.2 42.9 471 2-506 50-550 (552)
35 PRK05857 acyl-CoA synthetase; 100.0 6.8E-62 1.5E-66 500.7 43.3 466 2-504 50-531 (540)
36 PRK07656 long-chain-fatty-acid 100.0 1.6E-61 3.5E-66 496.9 45.5 468 2-500 39-512 (513)
37 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2E-61 4.3E-66 496.3 45.3 472 2-500 34-514 (515)
38 PRK05605 long-chain-fatty-acid 100.0 2.1E-61 4.5E-66 501.5 45.6 479 2-507 66-572 (573)
39 PRK08043 bifunctional acyl-[ac 100.0 6.5E-62 1.4E-66 515.7 42.5 469 2-505 240-714 (718)
40 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.2E-61 6.9E-66 496.3 45.9 469 2-499 62-537 (538)
41 PRK06839 acyl-CoA synthetase; 100.0 2.9E-61 6.2E-66 492.8 45.1 454 2-504 36-495 (496)
42 PRK08316 acyl-CoA synthetase; 100.0 2.3E-61 5E-66 496.9 44.6 474 2-507 45-522 (523)
43 PTZ00342 acyl-CoA synthetase; 100.0 9.2E-62 2E-66 506.3 41.7 483 2-509 100-739 (746)
44 PRK12583 acyl-CoA synthetase; 100.0 5.4E-61 1.2E-65 497.7 47.0 485 2-509 54-557 (558)
45 PRK07445 O-succinylbenzoic aci 100.0 1.7E-61 3.6E-66 484.7 41.7 419 3-508 29-451 (452)
46 PLN02330 4-coumarate--CoA liga 100.0 3.9E-61 8.4E-66 496.3 45.4 467 2-505 64-542 (546)
47 PRK07786 long-chain-fatty-acid 100.0 6.2E-61 1.3E-65 494.4 44.1 474 2-509 51-529 (542)
48 PRK08315 AMP-binding domain pr 100.0 1.2E-60 2.7E-65 494.9 46.0 487 2-511 52-558 (559)
49 PRK07769 long-chain-fatty-acid 100.0 2.8E-61 6E-66 505.1 41.4 467 2-504 64-614 (631)
50 PRK09088 acyl-CoA synthetase; 100.0 1.1E-60 2.5E-65 486.9 44.7 449 2-505 31-486 (488)
51 PRK06018 putative acyl-CoA syn 100.0 2.6E-60 5.6E-65 489.8 47.0 471 2-504 48-534 (542)
52 PRK05620 long-chain-fatty-acid 100.0 1.2E-60 2.7E-65 495.5 44.9 483 2-505 47-558 (576)
53 TIGR03443 alpha_am_amid L-amin 100.0 1.5E-61 3.3E-66 548.9 41.3 482 2-502 279-826 (1389)
54 PLN02387 long-chain-fatty-acid 100.0 2.6E-61 5.5E-66 507.0 40.0 483 3-508 116-693 (696)
55 PRK06187 long-chain-fatty-acid 100.0 1.3E-60 2.9E-65 491.2 44.1 470 2-505 40-520 (521)
56 PRK05852 acyl-CoA synthetase; 100.0 1.5E-60 3.3E-65 490.8 44.2 468 2-504 52-532 (534)
57 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.4E-60 3.1E-65 488.2 43.7 459 2-503 34-501 (502)
58 PRK06155 crotonobetaine/carnit 100.0 2.2E-60 4.8E-65 489.3 45.2 464 2-503 55-523 (542)
59 PRK07470 acyl-CoA synthetase; 100.0 1.6E-60 3.5E-65 490.4 44.1 467 2-505 41-519 (528)
60 PRK07514 malonyl-CoA synthase; 100.0 2.3E-60 4.9E-65 487.0 44.9 462 2-506 37-503 (504)
61 PRK06087 short chain acyl-CoA 100.0 2.6E-60 5.6E-65 490.8 45.5 478 2-509 58-541 (547)
62 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2.1E-60 4.6E-65 489.0 44.2 465 2-499 57-527 (527)
63 PLN03102 acyl-activating enzym 100.0 2.9E-60 6.3E-65 491.7 44.2 478 2-504 48-554 (579)
64 PRK12492 long-chain-fatty-acid 100.0 7.2E-60 1.6E-64 488.3 46.6 470 3-501 59-561 (562)
65 PRK12467 peptide synthase; Pro 100.0 3E-61 6.4E-66 580.2 40.9 457 2-503 3129-3593(3956)
66 PRK08279 long-chain-acyl-CoA s 100.0 4.3E-60 9.3E-65 493.8 44.0 475 2-505 71-565 (600)
67 PRK12476 putative fatty-acid-- 100.0 1.5E-60 3.2E-65 497.5 40.0 463 2-504 77-606 (612)
68 PRK10946 entE enterobactin syn 100.0 1.2E-59 2.5E-64 484.0 46.1 471 2-506 57-534 (536)
69 PRK06145 acyl-CoA synthetase; 100.0 1.2E-59 2.6E-64 480.7 45.2 457 2-503 36-496 (497)
70 KOG1256 Long-chain acyl-CoA sy 100.0 1.6E-60 3.4E-65 465.5 35.7 480 3-509 118-685 (691)
71 PRK05851 long-chain-fatty-acid 100.0 3.3E-60 7.1E-65 486.5 39.1 447 2-504 40-522 (525)
72 PRK08008 caiC putative crotono 100.0 2.2E-59 4.7E-64 481.0 44.6 464 2-499 46-517 (517)
73 PRK10252 entF enterobactin syn 100.0 5.6E-60 1.2E-64 534.5 44.0 456 2-501 492-964 (1296)
74 PRK07867 acyl-CoA synthetase; 100.0 4E-59 8.6E-64 478.3 46.0 455 2-504 37-507 (529)
75 PRK03640 O-succinylbenzoic aci 100.0 1.6E-59 3.5E-64 478.1 42.9 444 2-504 36-482 (483)
76 PRK13390 acyl-CoA synthetase; 100.0 1.6E-59 3.6E-64 479.8 42.9 459 2-499 33-501 (501)
77 PLN02430 long-chain-fatty-acid 100.0 7.3E-60 1.6E-64 493.1 41.0 479 2-508 85-650 (660)
78 PRK13383 acyl-CoA synthetase; 100.0 2.1E-59 4.6E-64 480.3 43.4 441 2-499 69-515 (516)
79 PRK07059 Long-chain-fatty-acid 100.0 2.9E-59 6.3E-64 483.8 44.7 471 2-501 57-555 (557)
80 PRK13388 acyl-CoA synthetase; 100.0 2.2E-59 4.9E-64 481.7 43.6 456 2-505 35-507 (540)
81 PRK12406 long-chain-fatty-acid 100.0 7.6E-59 1.6E-63 475.8 47.3 467 2-504 20-503 (509)
82 PRK08751 putative long-chain f 100.0 3.5E-59 7.6E-64 483.8 44.0 471 3-502 60-558 (560)
83 PRK08633 2-acyl-glycerophospho 100.0 7.9E-60 1.7E-64 528.3 41.9 477 2-505 650-1144(1146)
84 PRK06188 acyl-CoA synthetase; 100.0 6.8E-59 1.5E-63 477.9 45.1 466 2-505 46-518 (524)
85 COG1022 FAA1 Long-chain acyl-C 100.0 6.2E-60 1.3E-64 468.9 35.3 468 3-508 55-605 (613)
86 PRK04813 D-alanine--poly(phosp 100.0 5.7E-59 1.2E-63 476.8 43.5 459 2-503 36-502 (503)
87 TIGR02262 benz_CoA_lig benzoat 100.0 5.4E-59 1.2E-63 476.8 42.6 466 2-501 39-508 (508)
88 PRK12316 peptide synthase; Pro 100.0 9.4E-60 2E-64 575.7 43.5 456 2-503 545-1005(5163)
89 PRK07798 acyl-CoA synthetase; 100.0 2.6E-58 5.7E-63 475.4 46.7 475 2-504 37-532 (533)
90 PRK06178 acyl-CoA synthetase; 100.0 1.6E-58 3.6E-63 479.2 45.2 476 2-505 67-566 (567)
91 PRK08180 feruloyl-CoA synthase 100.0 2.3E-59 4.9E-64 488.4 38.7 470 2-508 78-600 (614)
92 PRK06164 acyl-CoA synthetase; 100.0 1.8E-58 3.9E-63 476.5 44.9 480 2-508 44-536 (540)
93 PRK12467 peptide synthase; Pro 100.0 1.1E-59 2.4E-64 566.7 41.3 464 2-503 546-1017(3956)
94 PRK06710 long-chain-fatty-acid 100.0 1E-58 2.2E-63 480.3 43.1 474 2-506 58-557 (563)
95 PRK07787 acyl-CoA synthetase; 100.0 1E-58 2.3E-63 469.7 41.3 425 14-501 42-470 (471)
96 PRK08276 long-chain-fatty-acid 100.0 3.5E-58 7.6E-63 470.3 44.8 468 2-507 20-499 (502)
97 PRK12316 peptide synthase; Pro 100.0 2.1E-59 4.6E-64 572.6 42.4 458 2-502 2037-2502(5163)
98 PRK07868 acyl-CoA synthetase; 100.0 2.2E-58 4.8E-63 499.7 43.7 457 2-503 481-957 (994)
99 PLN02479 acetate-CoA ligase 100.0 7.8E-58 1.7E-62 473.3 44.8 485 2-512 54-567 (567)
100 PTZ00216 acyl-CoA synthetase; 100.0 8.1E-59 1.8E-63 489.3 37.8 477 2-508 130-695 (700)
101 PRK08974 long-chain-fatty-acid 100.0 1.7E-57 3.6E-62 471.0 46.3 477 2-508 57-559 (560)
102 TIGR03205 pimA dicarboxylate-- 100.0 1.4E-57 3E-62 469.6 44.1 470 2-499 55-541 (541)
103 PRK13391 acyl-CoA synthetase; 100.0 2.9E-57 6.3E-62 464.1 45.0 469 2-504 33-509 (511)
104 PRK05691 peptide synthase; Val 100.0 3.2E-58 6.8E-63 558.8 43.5 461 2-501 3754-4225(4334)
105 PRK06814 acylglycerophosphoeth 100.0 1.8E-57 4E-62 507.1 45.8 470 2-510 667-1138(1140)
106 PRK05691 peptide synthase; Val 100.0 1.7E-57 3.8E-62 552.4 44.0 455 2-501 1165-1625(4334)
107 PRK09029 O-succinylbenzoic aci 100.0 1.1E-56 2.5E-61 453.4 41.8 418 2-507 37-456 (458)
108 PRK08308 acyl-CoA synthetase; 100.0 2.1E-56 4.6E-61 445.0 41.7 389 3-499 18-408 (414)
109 PRK12582 acyl-CoA synthetase; 100.0 5.6E-57 1.2E-61 471.3 37.9 470 2-508 89-611 (624)
110 TIGR01923 menE O-succinylbenzo 100.0 1.9E-56 4.1E-61 449.6 39.0 427 2-498 8-436 (436)
111 PRK09192 acyl-CoA synthetase; 100.0 2.5E-56 5.4E-61 463.3 40.5 456 2-504 58-566 (579)
112 PRK08162 acyl-CoA synthetase; 100.0 2E-55 4.4E-60 454.3 45.6 476 2-507 52-542 (545)
113 KOG1180 Acyl-CoA synthetase [L 100.0 1.5E-55 3.3E-60 411.4 30.5 485 3-509 99-674 (678)
114 PRK07768 long-chain-fatty-acid 100.0 4.8E-54 1E-58 443.9 42.2 455 2-503 38-544 (545)
115 PRK05850 acyl-CoA synthetase; 100.0 6.5E-54 1.4E-58 445.9 40.3 465 2-505 44-569 (578)
116 TIGR01733 AA-adenyl-dom amino 100.0 6.5E-51 1.4E-55 405.9 36.0 390 2-427 8-408 (408)
117 KOG1179 Very long-chain acyl-C 100.0 6.4E-51 1.4E-55 382.1 31.3 468 3-501 114-610 (649)
118 PF00501 AMP-binding: AMP-bind 100.0 2.9E-49 6.2E-54 395.1 26.3 370 2-402 30-417 (417)
119 PRK07824 O-succinylbenzoic aci 100.0 1E-46 2.2E-51 368.1 32.3 321 137-504 32-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 2.8E-44 6.1E-49 389.3 35.4 446 2-508 466-999 (1452)
121 TIGR02372 4_coum_CoA_lig 4-cou 100.0 2E-41 4.4E-46 328.5 28.0 289 140-494 95-386 (386)
122 TIGR02155 PA_CoA_ligase phenyl 100.0 9.2E-38 2E-42 311.0 27.0 327 138-496 73-418 (422)
123 COG1020 EntF Non-ribosomal pep 100.0 5.1E-35 1.1E-39 307.9 31.4 373 3-420 262-642 (642)
124 TIGR03335 F390_ftsA coenzyme F 100.0 8.9E-31 1.9E-35 260.8 28.6 329 137-495 83-440 (445)
125 KOG1178 Non-ribosomal peptide 100.0 2.7E-31 5.8E-36 274.2 22.4 467 3-502 79-577 (1032)
126 COG1541 PaaK Coenzyme F390 syn 100.0 1.6E-27 3.5E-32 224.7 26.4 325 137-495 87-430 (438)
127 KOG3628 Predicted AMP-binding 100.0 3.5E-26 7.5E-31 229.3 32.1 473 3-503 811-1350(1363)
128 PRK09188 serine/threonine prot 99.9 5.3E-22 1.1E-26 188.4 13.4 122 370-507 206-331 (365)
129 TIGR03089 conserved hypothetic 99.9 3.9E-20 8.5E-25 166.4 17.8 187 2-231 36-227 (227)
130 TIGR02304 aden_form_hyp probab 99.8 1E-18 2.2E-23 170.0 23.7 258 142-447 101-378 (430)
131 KOG3628 Predicted AMP-binding 99.6 1.5E-13 3.3E-18 139.6 22.8 461 3-504 134-704 (1363)
132 PF13193 AMP-binding_C: AMP-bi 99.3 1.2E-11 2.6E-16 89.7 6.7 70 410-492 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 99.0 1.6E-08 3.5E-13 96.7 17.6 235 138-406 87-358 (365)
134 PF03321 GH3: GH3 auxin-respon 98.6 6E-07 1.3E-11 91.1 14.9 164 254-449 266-452 (528)
135 PLN02249 indole-3-acetic acid- 98.3 3.2E-05 6.9E-10 78.9 18.4 43 375-417 410-456 (597)
136 PF14535 AMP-binding_C_2: AMP- 98.0 2.4E-05 5.2E-10 59.7 6.9 87 403-495 1-91 (96)
137 PLN02247 indole-3-acetic acid- 97.9 0.00096 2.1E-08 67.7 18.5 42 375-416 417-462 (606)
138 PLN02620 indole-3-acetic acid- 97.9 0.0015 3.3E-08 66.2 19.2 42 375-416 423-468 (612)
139 PF00501 AMP-binding: AMP-bind 79.0 9.7 0.00021 37.7 8.6 89 138-235 8-99 (417)
140 COG1541 PaaK Coenzyme F390 syn 78.7 8.6 0.00019 37.9 7.6 71 3-74 119-192 (438)
141 COG0031 CysK Cysteine synthase 77.7 21 0.00045 33.4 9.4 58 14-72 59-116 (300)
142 PLN02736 long-chain acyl-CoA s 76.5 30 0.00065 36.9 11.8 100 159-263 78-180 (651)
143 PLN03052 acetate--CoA ligase; 68.6 35 0.00075 37.0 10.1 100 138-239 188-290 (728)
144 PRK09274 peptide synthase; Pro 68.3 30 0.00064 35.9 9.4 98 139-237 20-121 (552)
145 PLN02387 long-chain-fatty-acid 64.4 43 0.00093 36.0 9.8 102 158-264 105-209 (696)
146 KOG1177 Long chain fatty acid 63.6 32 0.00069 34.2 7.5 109 157-266 75-200 (596)
147 PTZ00237 acetyl-CoA synthetase 63.5 46 0.001 35.4 9.8 79 158-237 91-172 (647)
148 PRK13295 cyclohexanecarboxylat 63.2 36 0.00079 35.2 8.8 96 139-238 38-136 (547)
149 PTZ00342 acyl-CoA synthetase; 62.7 44 0.00096 36.2 9.4 117 139-264 75-208 (746)
150 PRK03584 acetoacetyl-CoA synth 62.1 50 0.0011 35.2 9.8 95 139-238 98-195 (655)
151 PLN02246 4-coumarate--CoA liga 62.1 36 0.00079 35.1 8.6 83 159-242 50-135 (537)
152 PLN02654 acetate-CoA ligase 62.1 50 0.0011 35.3 9.8 96 139-238 103-201 (666)
153 PRK06187 long-chain-fatty-acid 59.9 50 0.0011 33.7 9.1 83 160-243 32-117 (521)
154 TIGR02188 Ac_CoA_lig_AcsA acet 59.5 53 0.0011 34.7 9.4 97 138-238 70-169 (625)
155 PRK06839 acyl-CoA synthetase; 59.3 62 0.0013 32.8 9.6 85 158-243 26-114 (496)
156 PRK04319 acetyl-CoA synthetase 58.5 42 0.00091 35.0 8.3 84 159-243 73-159 (570)
157 PRK00174 acetyl-CoA synthetase 58.2 55 0.0012 34.7 9.2 97 138-238 80-179 (637)
158 PRK07788 acyl-CoA synthetase; 57.8 45 0.00097 34.6 8.4 84 159-243 74-160 (549)
159 PRK10696 tRNA 2-thiocytidine b 57.7 78 0.0017 29.1 9.0 69 4-72 14-95 (258)
160 PLN03102 acyl-activating enzym 57.5 37 0.00081 35.5 7.7 82 159-241 39-123 (579)
161 PRK02261 methylaspartate mutas 57.4 1E+02 0.0023 25.0 9.4 47 191-237 15-62 (137)
162 PRK08315 AMP-binding domain pr 57.3 44 0.00096 34.6 8.3 79 159-238 43-124 (559)
163 PLN02565 cysteine synthase 57.1 67 0.0014 30.7 8.6 67 6-72 54-121 (322)
164 PRK06334 long chain fatty acid 56.8 34 0.00074 35.4 7.2 83 160-243 46-128 (539)
165 TIGR02316 propion_prpE propion 56.7 46 0.001 35.2 8.4 96 138-237 65-163 (628)
166 TIGR01733 AA-adenyl-dom amino 56.7 36 0.00079 33.4 7.2 67 176-243 20-86 (408)
167 PRK06155 crotonobetaine/carnit 56.6 51 0.0011 34.1 8.5 85 159-244 46-133 (542)
168 TIGR01217 ac_ac_CoA_syn acetoa 56.4 66 0.0014 34.3 9.5 94 140-238 99-195 (652)
169 PRK05857 acyl-CoA synthetase; 56.2 47 0.001 34.4 8.2 80 159-239 41-123 (540)
170 PRK13388 acyl-CoA synthetase; 55.0 74 0.0016 32.9 9.4 83 159-242 26-112 (540)
171 KOG1176 Acyl-CoA synthetase [L 54.9 29 0.00064 35.7 6.1 88 157-245 43-135 (537)
172 PRK08008 caiC putative crotono 54.2 71 0.0015 32.7 9.1 100 138-242 20-122 (517)
173 PLN02861 long-chain-fatty-acid 54.0 54 0.0012 35.0 8.3 86 158-244 76-164 (660)
174 TIGR02370 pyl_corrinoid methyl 53.9 94 0.002 27.2 8.4 87 183-271 86-181 (197)
175 PF05452 Clavanin: Clavanin; 53.8 8.4 0.00018 26.1 1.3 11 369-379 69-79 (80)
176 PRK13383 acyl-CoA synthetase; 53.5 53 0.0011 33.7 8.0 84 159-243 60-146 (516)
177 PRK08314 long-chain-fatty-acid 52.9 45 0.00097 34.5 7.4 84 159-243 35-122 (546)
178 PF09580 Spore_YhcN_YlaJ: Spor 52.8 68 0.0015 27.4 7.3 56 407-471 76-131 (177)
179 PLN02556 cysteine synthase/L-3 52.7 73 0.0016 31.1 8.2 68 5-72 97-165 (368)
180 PRK07798 acyl-CoA synthetase; 52.2 84 0.0018 32.2 9.3 84 159-243 28-114 (533)
181 PLN02574 4-coumarate--CoA liga 52.1 53 0.0012 34.1 7.8 83 160-243 67-153 (560)
182 PLN03013 cysteine synthase 51.4 84 0.0018 31.3 8.4 69 5-73 161-230 (429)
183 PLN02330 4-coumarate--CoA liga 51.1 54 0.0012 33.9 7.7 82 159-241 55-139 (546)
184 PRK05605 long-chain-fatty-acid 50.6 62 0.0013 33.7 8.1 84 159-243 57-143 (573)
185 cd02070 corrinoid_protein_B12- 50.3 1.6E+02 0.0036 25.7 9.5 86 183-270 84-178 (201)
186 PLN02430 long-chain-fatty-acid 50.2 1.1E+02 0.0023 32.8 9.8 85 159-244 76-163 (660)
187 PRK11761 cysM cysteine synthas 50.0 95 0.0021 29.2 8.4 66 6-72 51-117 (296)
188 PRK09088 acyl-CoA synthetase; 49.8 86 0.0019 31.8 8.8 92 138-237 8-102 (488)
189 TIGR01139 cysK cysteine syntha 49.5 98 0.0021 29.1 8.5 67 6-73 45-112 (298)
190 PRK08276 long-chain-fatty-acid 49.4 61 0.0013 33.1 7.7 83 160-243 12-97 (502)
191 PRK07514 malonyl-CoA synthase; 49.3 66 0.0014 32.8 7.9 84 159-243 28-114 (504)
192 PLN02614 long-chain acyl-CoA s 49.1 78 0.0017 33.9 8.6 85 159-244 79-166 (666)
193 TIGR03098 ligase_PEP_1 acyl-Co 49.0 65 0.0014 32.9 7.9 84 159-243 25-111 (515)
194 PRK07529 AMP-binding domain pr 48.8 86 0.0019 33.2 8.9 95 138-236 38-136 (632)
195 TIGR03089 conserved hypothetic 48.3 74 0.0016 28.5 7.1 54 11-66 171-227 (227)
196 PRK10717 cysteine synthase A; 48.2 1E+02 0.0022 29.6 8.4 67 5-72 51-118 (330)
197 PRK08316 acyl-CoA synthetase; 47.7 66 0.0014 32.9 7.7 85 158-243 35-122 (523)
198 PRK10524 prpE propionyl-CoA sy 47.6 1E+02 0.0022 32.7 9.2 96 138-237 66-164 (629)
199 PRK13391 acyl-CoA synthetase; 47.3 97 0.0021 31.7 8.8 97 138-242 10-109 (511)
200 TIGR03208 cyc_hxne_CoA_lg cycl 46.7 96 0.0021 32.0 8.7 79 159-238 53-134 (538)
201 PLN02479 acetate-CoA ligase 46.4 91 0.002 32.5 8.5 82 159-241 45-129 (567)
202 TIGR01136 cysKM cysteine synth 45.7 1.2E+02 0.0026 28.6 8.4 67 5-72 45-112 (299)
203 TIGR03443 alpha_am_amid L-amin 45.4 77 0.0017 37.4 8.5 99 138-237 249-350 (1389)
204 TIGR02155 PA_CoA_ligase phenyl 45.3 97 0.0021 30.8 8.2 67 6-73 107-176 (422)
205 PRK05850 acyl-CoA synthetase; 44.3 1.8E+02 0.004 30.3 10.4 84 158-243 34-123 (578)
206 PRK08279 long-chain-acyl-CoA s 44.1 1E+02 0.0022 32.4 8.5 84 159-243 62-148 (600)
207 KOG0633 Histidinol phosphate a 44.1 29 0.00064 31.3 3.6 71 3-73 95-169 (375)
208 COG0318 CaiC Acyl-CoA syntheta 44.0 1.2E+02 0.0026 31.3 8.9 93 138-238 24-119 (534)
209 PRK07656 long-chain-fatty-acid 43.7 97 0.0021 31.6 8.1 82 159-241 30-114 (513)
210 TIGR01138 cysM cysteine syntha 43.5 1.5E+02 0.0032 27.9 8.5 67 5-72 46-113 (290)
211 PRK05677 long-chain-fatty-acid 42.9 70 0.0015 33.3 7.0 82 159-241 49-134 (562)
212 PRK13382 acyl-CoA synthetase; 42.9 1E+02 0.0022 31.8 8.2 82 159-241 68-152 (537)
213 TIGR03335 F390_ftsA coenzyme F 41.6 1.3E+02 0.0027 30.3 8.3 65 5-72 117-184 (445)
214 TIGR01923 menE O-succinylbenzo 41.1 89 0.0019 31.0 7.3 65 173-238 16-80 (436)
215 PRK13390 acyl-CoA synthetase; 40.7 1.2E+02 0.0025 31.0 8.2 79 159-238 24-105 (501)
216 TIGR01137 cysta_beta cystathio 40.7 1.4E+02 0.003 30.1 8.5 67 5-72 49-116 (454)
217 PRK08751 putative long-chain f 40.4 82 0.0018 32.7 7.1 83 159-242 50-136 (560)
218 PLN00011 cysteine synthase 40.2 1.6E+02 0.0036 28.0 8.5 67 6-73 56-124 (323)
219 PLN02860 o-succinylbenzoate-Co 40.2 84 0.0018 32.7 7.1 79 159-238 32-113 (563)
220 PRK06702 O-acetylhomoserine am 40.0 1.7E+02 0.0037 29.3 8.7 57 14-72 97-155 (432)
221 KOG1252 Cystathionine beta-syn 39.6 3.1E+02 0.0068 26.2 9.5 63 11-73 96-159 (362)
222 cd01519 RHOD_HSP67B2 Member of 39.5 93 0.002 23.5 5.6 40 4-43 52-92 (106)
223 PRK12476 putative fatty-acid-- 39.4 2.5E+02 0.0054 29.6 10.6 101 139-242 48-155 (612)
224 PRK07470 acyl-CoA synthetase; 39.3 1.3E+02 0.0027 31.0 8.2 82 159-241 32-116 (528)
225 TIGR02379 ECA_wecE TDP-4-keto- 38.3 95 0.0021 30.4 6.7 61 6-70 59-125 (376)
226 cd01561 CBS_like CBS_like: Thi 38.3 1.9E+02 0.0041 27.0 8.5 59 14-73 50-108 (291)
227 PRK05620 long-chain-fatty-acid 38.0 1.8E+02 0.0039 30.3 9.2 85 158-243 37-125 (576)
228 PF01037 AsnC_trans_reg: AsnC 37.5 1.4E+02 0.003 20.7 7.3 48 406-466 10-57 (74)
229 PRK12406 long-chain-fatty-acid 37.2 1.2E+02 0.0026 31.0 7.6 83 160-243 12-97 (509)
230 PRK08162 acyl-CoA synthetase; 36.7 1.1E+02 0.0025 31.5 7.4 84 159-243 43-129 (545)
231 PRK11706 TDP-4-oxo-6-deoxy-D-g 36.7 1.1E+02 0.0024 29.8 7.0 53 14-70 68-125 (375)
232 PF02310 B12-binding: B12 bind 36.5 1.3E+02 0.0028 23.4 6.1 47 190-236 11-58 (121)
233 cd02069 methionine_synthase_B1 36.5 1.3E+02 0.0028 26.8 6.6 80 191-274 100-186 (213)
234 KOG0025 Zn2+-binding dehydroge 36.4 1.6E+02 0.0036 27.4 7.1 61 14-74 158-219 (354)
235 PRK07059 Long-chain-fatty-acid 36.2 1.3E+02 0.0028 31.2 7.7 82 159-241 48-132 (557)
236 PRK06178 acyl-CoA synthetase; 36.1 1.4E+02 0.0031 30.9 8.1 85 159-244 58-145 (567)
237 PRK03640 O-succinylbenzoic aci 35.4 1.5E+02 0.0033 29.9 8.0 82 159-241 27-111 (483)
238 PRK12492 long-chain-fatty-acid 35.3 91 0.002 32.4 6.4 80 159-239 49-132 (562)
239 cd06448 L-Ser-dehyd Serine deh 35.3 1.3E+02 0.0027 28.7 6.8 56 17-73 51-106 (316)
240 TIGR02898 spore_YhcN_YlaJ spor 34.9 2.1E+02 0.0046 24.0 7.1 54 408-468 56-109 (158)
241 PRK12582 acyl-CoA synthetase; 34.8 1.2E+02 0.0025 32.2 7.2 79 158-237 79-165 (624)
242 PF00464 SHMT: Serine hydroxym 34.6 2.8E+02 0.006 27.5 9.0 78 14-91 107-196 (399)
243 TIGR02262 benz_CoA_lig benzoat 34.6 1.8E+02 0.0038 29.7 8.4 84 159-243 30-116 (508)
244 cd01445 TST_Repeats Thiosulfat 34.1 1.3E+02 0.0027 24.5 5.7 43 3-45 80-126 (138)
245 PRK06381 threonine synthase; V 34.0 1.3E+02 0.0028 28.7 6.7 60 14-73 59-118 (319)
246 COG0399 WecE Predicted pyridox 33.2 1.8E+02 0.0038 28.5 7.3 65 4-72 60-130 (374)
247 PRK04870 histidinol-phosphate 33.2 4.5E+02 0.0097 25.3 10.8 55 14-71 102-160 (356)
248 PLN02356 phosphateglycerate ki 32.9 1.7E+02 0.0037 29.2 7.3 58 14-72 101-158 (423)
249 PRK06164 acyl-CoA synthetase; 32.7 1.3E+02 0.0029 30.9 7.2 79 159-238 35-116 (540)
250 cd00640 Trp-synth-beta_II Tryp 32.5 1.7E+02 0.0036 26.5 6.9 56 17-73 50-105 (244)
251 PTZ00216 acyl-CoA synthetase; 32.5 1.7E+02 0.0037 31.5 8.0 87 157-244 119-208 (700)
252 PRK06087 short chain acyl-CoA 32.5 1.2E+02 0.0027 31.2 6.9 77 159-236 49-128 (547)
253 PRK07867 acyl-CoA synthetase; 32.3 1.9E+02 0.0042 29.7 8.2 82 159-241 28-113 (529)
254 PRK07008 long-chain-fatty-acid 32.0 1.6E+02 0.0034 30.5 7.5 82 159-241 39-123 (539)
255 PRK06018 putative acyl-CoA syn 31.8 1.3E+02 0.0029 31.0 7.0 83 159-242 39-124 (542)
256 PRK12583 acyl-CoA synthetase; 31.6 1.4E+02 0.0031 30.8 7.2 79 159-238 45-126 (558)
257 cd01449 TST_Repeat_2 Thiosulfa 30.6 1.1E+02 0.0023 23.8 4.8 39 5-43 65-104 (118)
258 PRK07786 long-chain-fatty-acid 30.4 1.9E+02 0.0041 29.8 7.8 82 159-241 42-126 (542)
259 PRK08974 long-chain-fatty-acid 30.3 1.3E+02 0.0028 31.3 6.6 81 159-240 48-132 (560)
260 PRK08633 2-acyl-glycerophospho 30.3 2.2E+02 0.0048 32.7 9.0 98 138-244 628-727 (1146)
261 TIGR03205 pimA dicarboxylate-- 30.2 1.6E+02 0.0034 30.4 7.2 78 159-237 46-126 (541)
262 PRK10877 protein disulfide iso 29.9 4.2E+02 0.009 23.9 9.4 48 378-431 55-105 (232)
263 cd02067 B12-binding B12 bindin 29.9 2.3E+02 0.0051 22.0 6.6 40 34-73 20-59 (119)
264 PRK06710 long-chain-fatty-acid 29.9 1.5E+02 0.0033 30.8 7.0 81 159-240 49-132 (563)
265 PRK04813 D-alanine--poly(phosp 29.8 1.2E+02 0.0026 30.8 6.2 78 159-237 27-107 (503)
266 PRK06060 acyl-CoA synthetase; 28.6 2E+02 0.0042 31.1 7.7 80 160-240 31-113 (705)
267 PRK06188 acyl-CoA synthetase; 28.4 1.9E+02 0.0041 29.6 7.4 79 159-238 37-118 (524)
268 PRK05852 acyl-CoA synthetase; 28.3 1.9E+02 0.0041 29.8 7.4 76 159-235 43-121 (534)
269 COG0365 Acs Acyl-coenzyme A sy 28.1 2.2E+02 0.0048 29.4 7.4 96 142-242 26-125 (528)
270 TIGR02080 O_succ_thio_ly O-suc 28.1 2.7E+02 0.0059 27.3 8.0 15 37-51 86-100 (382)
271 PF00818 Ice_nucleation: Ice n 28.0 25 0.00055 16.5 0.4 9 287-295 1-9 (16)
272 PF00455 DeoRC: DeoR C termina 27.5 2.4E+02 0.0053 23.6 6.6 59 202-268 15-74 (161)
273 PRK15348 type III secretion sy 26.9 4.7E+02 0.01 23.9 8.5 72 409-483 110-184 (249)
274 KOG0023 Alcohol dehydrogenase, 26.7 2.7E+02 0.0059 26.5 7.0 61 9-72 173-234 (360)
275 PF01514 YscJ_FliF: Secretory 26.5 2.7E+02 0.0058 24.6 6.8 73 407-484 116-194 (206)
276 PRK08045 cystathionine gamma-s 26.2 3.3E+02 0.0071 26.8 8.2 12 14-25 88-99 (386)
277 PRK07787 acyl-CoA synthetase; 26.0 1.8E+02 0.004 29.2 6.7 76 159-237 25-100 (471)
278 KOG3055 Phosphoribosylformimin 26.0 3.8E+02 0.0083 23.1 7.1 93 5-100 48-140 (263)
279 PF01041 DegT_DnrJ_EryC1: DegT 25.6 1.7E+02 0.0037 28.4 6.1 64 5-72 52-121 (363)
280 cd00615 Orn_deC_like Ornithine 25.6 4.6E+02 0.01 24.4 8.9 55 14-71 96-161 (294)
281 PRK08180 feruloyl-CoA synthase 25.4 2.1E+02 0.0045 30.2 7.2 79 158-237 68-154 (614)
282 COG1064 AdhP Zn-dependent alco 25.2 2E+02 0.0044 27.6 6.1 60 9-72 158-218 (339)
283 PRK11658 UDP-4-amino-4-deoxy-L 25.2 2.9E+02 0.0062 27.1 7.6 60 6-69 61-126 (379)
284 TIGR03590 PseG pseudaminic aci 25.0 4.6E+02 0.01 24.3 8.6 57 15-73 29-89 (279)
285 PRK08574 cystathionine gamma-s 25.0 2.9E+02 0.0062 27.2 7.5 12 14-25 89-100 (385)
286 PF07210 DUF1416: Protein of u 24.9 1.4E+02 0.0031 21.7 3.8 18 310-327 16-33 (85)
287 PRK05939 hypothetical protein; 24.6 2.9E+02 0.0062 27.4 7.4 56 14-71 83-138 (397)
288 PRK07769 long-chain-fatty-acid 24.6 6.6E+02 0.014 26.5 10.8 82 159-241 55-141 (631)
289 TIGR03588 PseC UDP-4-keto-6-de 24.2 3.4E+02 0.0073 26.5 8.0 64 5-71 56-128 (380)
290 PF01436 NHL: NHL repeat; Int 24.1 1.4E+02 0.003 16.4 3.0 18 383-400 9-26 (28)
291 PRK09192 acyl-CoA synthetase; 24.1 3.2E+02 0.007 28.5 8.2 85 158-243 48-142 (579)
292 PLN02723 3-mercaptopyruvate su 24.0 1.5E+02 0.0032 28.4 5.1 44 2-45 253-297 (320)
293 PRK07445 O-succinylbenzoic aci 23.7 2.6E+02 0.0057 28.1 7.2 76 161-237 21-100 (452)
294 PF09664 DUF2399: Protein of u 23.3 4.4E+02 0.0095 21.9 10.3 112 157-278 21-135 (152)
295 COG1167 ARO8 Transcriptional r 23.2 2.9E+02 0.0063 27.9 7.3 62 14-76 176-238 (459)
296 PRK14807 histidinol-phosphate 23.0 3.7E+02 0.008 25.8 7.9 55 14-71 97-155 (351)
297 TIGR01734 D-ala-DACP-lig D-ala 23.0 2.1E+02 0.0045 29.1 6.4 79 159-238 25-106 (502)
298 PRK09331 Sep-tRNA:Cys-tRNA syn 22.9 3.4E+02 0.0073 26.6 7.6 56 14-72 99-166 (387)
299 cd01563 Thr-synth_1 Threonine 22.8 2.6E+02 0.0056 26.6 6.6 66 7-73 58-125 (324)
300 PRK09509 fieF ferrous iron eff 22.8 2.7E+02 0.0059 26.2 6.7 63 408-472 215-277 (299)
301 PRK15400 lysine decarboxylase 22.7 5.1E+02 0.011 28.0 9.0 58 14-74 232-308 (714)
302 KOG1250 Threonine/serine dehyd 22.1 3.1E+02 0.0067 26.9 6.6 54 21-74 117-170 (457)
303 cd06451 AGAT_like Alanine-glyo 21.7 5.2E+02 0.011 24.7 8.7 12 14-25 71-82 (356)
304 PF11974 MG1: Alpha-2-macroglo 21.6 49 0.0011 25.0 1.1 25 310-334 23-48 (97)
305 PRK08043 bifunctional acyl-[ac 21.5 2.3E+02 0.0049 30.7 6.6 82 159-241 231-314 (718)
306 cd00378 SHMT Serine-glycine hy 21.2 2.4E+02 0.0051 27.8 6.2 59 14-72 102-169 (402)
307 PRK10411 DNA-binding transcrip 21.2 2.7E+02 0.0058 25.3 6.0 85 201-293 88-179 (240)
308 PRK05934 type III secretion sy 21.1 5.7E+02 0.012 24.2 7.8 92 409-504 74-174 (341)
309 PRK09029 O-succinylbenzoic aci 20.8 3.3E+02 0.0071 27.3 7.3 78 159-237 28-108 (458)
310 PRK06234 methionine gamma-lyas 20.7 4.7E+02 0.01 25.9 8.1 56 14-71 100-156 (400)
311 TIGR02275 DHB_AMP_lig 2,3-dihy 20.5 2.7E+02 0.0058 28.6 6.7 79 159-238 48-129 (527)
312 PF01276 OKR_DC_1: Orn/Lys/Arg 20.5 5.1E+02 0.011 25.8 8.1 59 14-75 103-180 (417)
313 PHA02553 6 baseplate wedge sub 20.5 2.9E+02 0.0063 29.0 6.5 73 394-468 303-376 (611)
314 PTZ00297 pantothenate kinase; 20.3 5.4E+02 0.012 30.6 9.3 97 159-264 457-556 (1452)
315 cd01562 Thr-dehyd Threonine de 20.2 3.2E+02 0.007 25.6 6.7 56 17-73 65-120 (304)
316 PF07722 Peptidase_C26: Peptid 20.1 1.5E+02 0.0032 26.4 4.0 31 34-64 30-60 (217)
317 PF10411 DsbC_N: Disulfide bon 20.1 81 0.0018 21.0 1.8 19 377-395 32-50 (57)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-78 Score=595.33 Aligned_cols=476 Identities=25% Similarity=0.270 Sum_probs=404.1
Q ss_pred cHHHHHHHHhcc---CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccC
Q 010344 2 SYRLVANALDTM---FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGG 78 (512)
Q Consensus 2 ~~~~~a~~L~~~---i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~ 78 (512)
.+.++|.+|.+. +++||+|++++||+++++.+++||+.+|+++.++||.+.+.++.+.++.++++++|++...
T Consensus 54 ~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~---- 129 (537)
T KOG1176|consen 54 RCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDF---- 129 (537)
T ss_pred HHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCch----
Confidence 368999999975 7889999999999999999999999999999999999999999999999999999999853
Q ss_pred ccccchhhHHhcCCCceEEeeccCCcccccccccCcc-HHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 79 RKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVS-WKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
.+++.........+++++................. +.++...... .. ..+.+.+|++.++|||||||.|||
T Consensus 130 --~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~dd~~~il~SSGTTg~PKg 201 (537)
T KOG1176|consen 130 --YDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP-----DG-IRPVSEDDTAAILYSSGTTGLPKG 201 (537)
T ss_pred --HHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC-----cc-cccCCCCCeEEEecCCCCCCCCce
Confidence 35555555555555555543311111111112222 4444433332 11 455667999999999999999999
Q ss_pred EEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 158 IPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
|++||+++..+..+......+...++.++.+|++|.+|+..++.+++.|++.++....++++.+++.+++|++|+++++|
T Consensus 202 V~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP 281 (537)
T KOG1176|consen 202 VVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVP 281 (537)
T ss_pred EEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcCh
Confidence 99999999998877776677788999999999999999999888777777766667778999999999999999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCC
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMT 317 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~ 317 (512)
.++..|+..+....+++++++.+.+||+++++++.+.++++++...+.+.||+||+++..+.+......+.+++|.++++
T Consensus 282 ~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g 361 (537)
T KOG1176|consen 282 PVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPG 361 (537)
T ss_pred HHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccc
Confidence 99999999876778999999999999999999999999999987889999999999976666555444578999999999
Q ss_pred ccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccC
Q 010344 318 TGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD 396 (512)
Q Consensus 318 ~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~ 396 (512)
++..+.++.|+.+++++ .||||+ ++..+.+| +.|++.+...| +++|||||||+|++|+||+|||++|++
T Consensus 362 ~~~~v~~e~g~~l~~~~--~GEI~vrg~~imkGY--~~NpeaT~~~~------~~~GW~~TGDiGy~D~DG~l~IvdR~K 431 (537)
T KOG1176|consen 362 VRVKVLDETGVSLGPNQ--TGEICVRGPQVMKGY--LKNPEATKEAF------DDDGWFHTGDLGYFDEDGYLYIVDRSK 431 (537)
T ss_pred eEEEeeCCCCCCCCCCC--ceEEEEECcccchhh--cCChHHHHhhc------ccCCccccCceEEEcCCCeEEEecchh
Confidence 99999999999999999 699999 66666542 34555555444 344899999999999999999999999
Q ss_pred ceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce
Q 010344 397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV 476 (512)
Q Consensus 397 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 476 (512)
|+||.+|++|+|.|||++|. .||.|.|++|++.+|+..| +.+.|+|+.+++.. ++++++.++++ ++|++|+.|
T Consensus 432 dlIk~~G~qv~P~EiE~vL~-~hP~V~eaaVvgipDe~~G-e~p~A~VV~k~g~~-lte~di~~~v~----k~l~~y~~~ 504 (537)
T KOG1176|consen 432 DLIKYGGEQVSPAEIEAVLL-THPDVLEAAVVGIPDEVWG-ETPAAFVVLKKGST-LTEKDIIEYVR----KKLPAYKLP 504 (537)
T ss_pred hheeeCCEEeCHHHHHHHHH-hCCCccEEEEEcccccccC-CcceEEEEecCCCc-CCHHHHHHHHH----hhCChhhcc
Confidence 99999999999999999999 9999999999999999999 99999999999776 88888887776 566779999
Q ss_pred eeEEEecCCCCCCCchHHHHHHHHHHHhhh
Q 010344 477 SLVKIVLEFPRTASNKLLRRVLKDQLKHEL 506 (512)
Q Consensus 477 ~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~ 506 (512)
+.++|+|+||+|++|||.|+.|++++.+..
T Consensus 505 ~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~ 534 (537)
T KOG1176|consen 505 GGVVFVDELPKTPNGKILRRKLRDIAKKLG 534 (537)
T ss_pred CeEEEeccCCCCCcchHHHHHHHHHHHhcc
Confidence 999999999999999999999999998643
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2.6e-77 Score=585.10 Aligned_cols=465 Identities=27% Similarity=0.407 Sum_probs=397.4
Q ss_pred HHHHHHHHhcc--CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 3 YRLVANALDTM--FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 3 ~~~~a~~L~~~--i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
++++|+.|++. + +||+|+|++||.+|.++++|||+++||+.+|+.+.++++.+..+++++++|++|+++......+.
T Consensus 50 v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~ 128 (528)
T COG0365 50 VARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKE 128 (528)
T ss_pred HHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEeccccccccc
Confidence 68999999874 7 99999999999999999999999999999999999999999999999999999999887766666
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.+....+.+.... .++.... . ..|.++.+.... ..+....+++|+++++|||||||+||||+|
T Consensus 129 ~~~~~~~~~~~~~-~iv~~r~----------~-~~~~~~~~~~~~-----~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H 191 (528)
T COG0365 129 IALLEDADAVLSS-VVVVPRL----------G-LWYDEAVEKASE-----KFEFEPLPADDPLFLLYTSGTTGKPKGIVH 191 (528)
T ss_pred ccchhHHHHhhcc-eEEeccc----------c-ccHHHHhhccCC-----CCCccccCCCCeEEEEeCCCCCCCCceEEE
Confidence 5555555544433 2222211 1 567777765443 223334788999999999999999999999
Q ss_pred cCchhHHHHHHhh-ccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCc--hhhHHHHHHhcCceEEecc
Q 010344 161 TQLSPIRCAAEAW-GHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPL--ERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 161 s~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~--~~~~~~~l~~~~~t~l~~~ 236 (512)
+|..+........ ..+.+.++|++++..++.|++|++. ++++|.+|++++++++..+ ++.+++.|+++++|.+++.
T Consensus 192 ~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~ts 271 (528)
T COG0365 192 SHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTS 271 (528)
T ss_pred eCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeC
Confidence 9998776665554 3567779999999999999999987 9999999999999987655 8999999999999999999
Q ss_pred hHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccC
Q 010344 237 PSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATM 316 (512)
Q Consensus 237 P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~ 316 (512)
|+.++.|++......+++++||.+.+.||+++++..+++.+.+ +++|.+.||+||+|..+..... +...++.|.|+|
T Consensus 272 PT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d~~gqTEtg~~~~~~~~--~~~~g~~g~p~p 348 (528)
T COG0365 272 PTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILDIYGQTETGMGFIAGRP--PVKNGSSGLPLP 348 (528)
T ss_pred HHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEeccccccccCccccCCCC--CcCCCCCCCCCC
Confidence 9999999988766778999999999999999999999999998 6999999999999965554433 344455599999
Q ss_pred CccEEEeCCCCCCCCCCCCccccccccccccccccccccc-Ccce-eEEecCCcccCceeeeecceEEEeCCCeEEEEec
Q 010344 317 TTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNA-DHEE-VYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGR 394 (512)
Q Consensus 317 ~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR 394 (512)
|+++.|+|++|++++.|+ |+|++.....+...++.++ +... .|+. +||.|||.+++|+||+++|+||
T Consensus 349 G~~~~vvdd~g~~~~~~~---G~Lvi~~~~p~~~~~~w~d~er~~~~y~~--------~~y~tGD~~~~DedGy~~i~GR 417 (528)
T COG0365 349 GYAVRRVDDEGNPVPPGV---GELVVRLPWPGMALTYWNDPERYKEAYFG--------RWYRTGDWAERDEDGYFWLHGR 417 (528)
T ss_pred CceeEEECCCCCcCCCCc---eEEEEeCCCchhhhhhhCCHHHHHHHHhh--------ceeecCceeEEccCCCEEEEee
Confidence 999999998899999997 9999954333333333332 2222 2331 1899999999999999999999
Q ss_pred cCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcc
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLF 474 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 474 (512)
.||+||+.|++|.+.|||++|. +||.|.|++||+.+|+..| +.+.+||+++++.. .+ +|.+.|++++++.+.+++
T Consensus 418 ~DDvI~vsG~Rig~~EvE~~l~-~hP~VaEaAvVg~pd~~kg-~~v~afVvL~~g~~-~~--~L~~ei~~~vr~~~~~~~ 492 (528)
T COG0365 418 SDDVIKVSGKRIGPLEIESVLL-AHPAVAEAAVVGVPDPGKG-QIVLAFVVLAAGVE-PN--ELAEEIRRHVARNIGPHA 492 (528)
T ss_pred ccceEeccCeeccHHHHHHHHH-hCcceeeeEEEeccCCCCC-cEEEEEEEecCCCC-hH--HHHHHHHHHHHhccCccc
Confidence 9999999999999999999999 9999999999999999999 89999999999986 55 999999999999999999
Q ss_pred ceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 475 KVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 475 ~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
.|+.|+++++||||.||||.|+.|++.+.+
T Consensus 493 ~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 493 IPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred CCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 999999999999999999999999998874
No 3
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=3.3e-75 Score=611.53 Aligned_cols=509 Identities=66% Similarity=1.097 Sum_probs=420.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++|+++|+++......+.
T Consensus 217 ~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~ 296 (728)
T PLN03052 217 QVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKS 296 (728)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcc
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999999876555555
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.+....+.+......+++................+|++++.............+....++++++|+|||||||.||||++
T Consensus 297 ~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~ 376 (728)
T PLN03052 297 IPLYSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPW 376 (728)
T ss_pred cchHHHHHHhcCCcEEEEeCCCCccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEE
Confidence 66666665554444444432221111111123456888765432100011122222356889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
+|.+++.........+++.++|++++..+++|+++.+.++.+|..|++++++++..++..+++.++++++|++.++|+++
T Consensus 377 sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l 456 (728)
T PLN03052 377 TQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIV 456 (728)
T ss_pred CchHHHHHHHHHHHhcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHH
Confidence 99998776665555678899999999999999999887889999999999998766677899999999999999999999
Q ss_pred HHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccE
Q 010344 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGF 320 (512)
Q Consensus 241 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 320 (512)
+.|.+.......++++||.++++||+++++...++.+.++..++.+.||+||+++.+.......+...+++|.|.+|+++
T Consensus 457 ~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v 536 (728)
T PLN03052 457 KTWKNTNCMAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKL 536 (728)
T ss_pred HHHHhcCCcccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceE
Confidence 99987654556789999999999999999988888877644679999999999875544333334456789999999999
Q ss_pred EEeCCCCCCCCCCCCcccccccccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceee
Q 010344 321 VILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMN 400 (512)
Q Consensus 321 ~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~ 400 (512)
+|+|++|++++.|+++.|||++++.+++...++.+.+....||.++|..++++||+|||++++|++|+++|+||.||+||
T Consensus 537 ~v~d~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~ 616 (728)
T PLN03052 537 FILDDSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMN 616 (728)
T ss_pred EEECCCCCCCCCCCCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEe
Confidence 99999999999986436999997766665555666666677887777777888999999999999999999999999999
Q ss_pred ecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEec--CCCCCCcHHHHHHHHHHHHHhccCCccceee
Q 010344 401 LGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLK--KGFTSQPVDKLKMIFSKAIQRNLNPLFKVSL 478 (512)
Q Consensus 401 ~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~--~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~ 478 (512)
++|++|+|.|||++|...||.|.+++|++++++..|.+.+++||+++ ++.. .+.++|+++++++++++|+++++|..
T Consensus 617 ~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~-~~~~~L~~~i~~~i~~~l~~~~~p~~ 695 (728)
T PLN03052 617 LGGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSN-PDLNELKKIFNSAIQKKLNPLFKVSA 695 (728)
T ss_pred eCCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCC-CCHHHHHHHHHHHHHhhcCCccCCCE
Confidence 99999999999999943789999999999998766547899999998 5544 67789999999999999999999999
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHHhhhhcccCC
Q 010344 479 VKIVLEFPRTASNKLLRRVLKDQLKHELSVRSRI 512 (512)
Q Consensus 479 i~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~~~~ 512 (512)
|+++++||+|.+||++|+.|++++.+... ++||
T Consensus 696 i~~v~~lP~T~sGKi~Rr~Lr~~~~~~~~-~~~~ 728 (728)
T PLN03052 696 VVIVPSFPRTASNKVMRRVLRQQLAQELS-RSKL 728 (728)
T ss_pred EEEcCCCCCCCchHHHHHHHHHHHHhhhh-ccCC
Confidence 99999999999999999999999987776 7765
No 4
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-75 Score=533.04 Aligned_cols=487 Identities=19% Similarity=0.209 Sum_probs=404.1
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhcc---C
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRG---G 78 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~---~ 78 (512)
++++|++|... +++||+|++..||+.+|+.++|||+++|.+.+++||++...+++..|+..+++++|+...+... -
T Consensus 87 v~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~ 166 (596)
T KOG1177|consen 87 VESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYE 166 (596)
T ss_pred HHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHH
Confidence 67899999999 9999999999999999999999999999999999999999999999999999999999764210 0
Q ss_pred ccccchhhHHhcC---------CCceEEeeccCCcccccccccCccHHHHhhccCCCCCC-CCCCCCCCCCCCeEEEEec
Q 010344 79 RKFPLYSKVAEAG---------PLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGP-KYYPPVYRPVDSVINILFS 148 (512)
Q Consensus 79 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~T 148 (512)
-..+...++.... +....++....+ ..-++...+++++..+...... -........+||++.|.||
T Consensus 167 ~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed----~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFT 242 (596)
T KOG1177|consen 167 TLLEICPEVMRGDPGQLKSELLPELTHVILADED----HPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFT 242 (596)
T ss_pred HHHHhhHHhhcCCCccccccccccceEEEecCCC----CcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEec
Confidence 0001112222111 112222222111 1235677788888776651111 1222344678999999999
Q ss_pred CCCCCCCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCCCchhhHHHHHHh
Q 010344 149 SGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQD 227 (512)
Q Consensus 149 SGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~ 227 (512)
|||||.|||+.+||.+++++.......+++.+.+++++..|++|.+|.. .++.++..|+++++..+.+++...++.|++
T Consensus 243 SGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ 322 (596)
T KOG1177|consen 243 SGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISN 322 (596)
T ss_pred cCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHh
Confidence 9999999999999999999999998899999999999999999999965 499999999999999889999999999999
Q ss_pred cCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCC--
Q 010344 228 SGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQP-- 305 (512)
Q Consensus 228 ~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~-- 305 (512)
+++|.++++|+++..|+..+.....+++++|.++.||+++++++.+.+.....-..+...||+||+++..+.....++
T Consensus 323 ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~ 402 (596)
T KOG1177|consen 323 EKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPE 402 (596)
T ss_pred hceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHH
Confidence 999999999999999999888889999999999999999999999998876533348999999999987665544333
Q ss_pred CcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEe
Q 010344 306 QAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRT 384 (512)
Q Consensus 306 ~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~ 384 (512)
....++|..+++.+..|+|.+|.++|.|.+ |||++ +..++.+|.+ +++.+. .....++||+|||+|.+|
T Consensus 403 ~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~~--Gel~iRGY~tMl~Ywg--~~~kT~------eti~~drW~~TGDi~~m~ 472 (596)
T KOG1177|consen 403 ERIKSVGHLMDHYEAAIVDKDGSEVPLGTK--GELLIRGYSTMLGYWG--EEEKTK------ETIGNDRWYDTGDIAVMD 472 (596)
T ss_pred HHHhhhhhcccccccccccCCCCccccCCC--ceEEEEechhheeecC--Ccccch------hhcccccceecCceEEEc
Confidence 356799999999999999999999999995 99999 4445543321 111111 223577899999999999
Q ss_pred CCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCC-CcHHHHHHHHH
Q 010344 385 VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTS-QPVDKLKMIFS 463 (512)
Q Consensus 385 ~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~-~~~~~l~~~~~ 463 (512)
++|+++|+||.+|+|+.+|++|+|.|||+.|. +||.|.++.|++++|++.| +.++|+|-++.+... .+.++|+++|+
T Consensus 473 enG~i~iVGRskdmI~rGGENVyP~ElE~fL~-~hp~V~~a~VVGV~D~R~G-E~VCA~vRLqe~~e~~~t~E~lKa~Ck 550 (596)
T KOG1177|consen 473 ENGTIEIVGRSKDMIIRGGENVYPTELEDFLN-KHPLVKEAHVVGVPDERLG-EEVCACVRLQEGAEGKTTAETLKAMCK 550 (596)
T ss_pred CCCcEEEEEcccCeEEeCCcccChHHHHHHHh-hCCCeeeEEEEccCCCccc-ceEEEEEEeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999999998 9999999999999999999 999999999987542 36677777666
Q ss_pred HHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhhcc
Q 010344 464 KAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVR 509 (512)
Q Consensus 464 ~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~ 509 (512)
.+|+.|++|++|++++++|+|-+|||+|.+++++++.+++..
T Consensus 551 ----~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k~~l~l~ 592 (596)
T KOG1177|consen 551 ----GKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSKGHLGLF 592 (596)
T ss_pred ----cccccccCCcEEEEeccCcccccccchhHHHHHHHHhhccee
Confidence 678899999999999999999999999999999999877643
No 5
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4.3e-71 Score=563.07 Aligned_cols=488 Identities=69% Similarity=1.139 Sum_probs=375.7
Q ss_pred cCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccccchhhHHhcCCCceEEeeccCC
Q 010344 24 MPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGD 103 (512)
Q Consensus 24 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (512)
++|++++++++|||+++|++++|+|+.++.+++.+++++++++++|+++......+..+.+..+........+++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 68999999999999999999999999999999999999999999999864311111122222222222222233221111
Q ss_pred cccccccccCccHHHHhhccCCCC--CCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhccccccCC
Q 010344 104 DVGIQLRQQDVSWKDFLSCVDYHP--GPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVG 181 (512)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~ 181 (512)
...........+|.+++....... ...........++++++|+|||||||.||||++||.++..+.......+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 000000112345777653221100 000111112346889999999999999999999999988766555556778899
Q ss_pred cEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHHHHHHccCC--CCCCCcCceeE
Q 010344 182 DVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNC--LQGLDWTKIRS 259 (512)
Q Consensus 182 ~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~--~~~~~l~~l~~ 259 (512)
|++++..|++|..++..++.+++.|+++++.+...++..+++.|+++++|++.++|+++..|++... ....++++||.
T Consensus 161 d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~ 240 (499)
T PLN03051 161 DVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240 (499)
T ss_pred CEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheE
Confidence 9999999999999987788999999999998755677899999999999999999999999877542 33567889999
Q ss_pred EEeecCCCCchhhHHHHHhhC-CCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccc
Q 010344 260 FASTGETSNVDDDLWLASKAY-YKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVG 338 (512)
Q Consensus 260 i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~G 338 (512)
+++||+++++++.+++++.+. +.++++.||+||++..+...........+++|.|.++++++|+|++|++++.|+.+.|
T Consensus 241 i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~G 320 (499)
T PLN03051 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVG 320 (499)
T ss_pred EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCCCCcce
Confidence 999999999998887776331 3779999999998754333222223345789999999999999999999999853369
Q ss_pred ccccccccccccccccccCcceeEEecCCcc--cCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhh
Q 010344 339 EVGLFPLYLGATDRLLNADHEEVYFSGMPIY--KGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 416 (512)
Q Consensus 339 el~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~ 416 (512)
||+++..+.+...+|.+++.+..++.+.+.. ++.+||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|.
T Consensus 321 el~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~ 400 (499)
T PLN03051 321 EVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACD 400 (499)
T ss_pred EEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHH
Confidence 9999544443233444555445555443332 45679999999999999999999999999999999999999999997
Q ss_pred cC-CcceeeeeEEeeCCCCCCCceEEEEE---EecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCch
Q 010344 417 GA-DESILETAAISVSPAGGGPEVLVICV---VLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNK 492 (512)
Q Consensus 417 ~~-~~~v~~~~v~~~~~~~~~~~~~~a~v---~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GK 492 (512)
+ ||+|.+++|++++++..+++.++++| +++++....+.+++.+++++++.++|++|++|..|+++++||+|++||
T Consensus 401 -~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v~~lP~t~~GK 479 (499)
T PLN03051 401 -RAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIVPELPRNASNK 479 (499)
T ss_pred -hcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEcCCCCCCCCcc
Confidence 5 99999999999999887745788998 777664226778999999999999999888887899999999999999
Q ss_pred HHHHHHHHHHHhhhhcccCC
Q 010344 493 LLRRVLKDQLKHELSVRSRI 512 (512)
Q Consensus 493 i~r~~l~~~~~~~~~~~~~~ 512 (512)
++|++|++.+.+.+..|+||
T Consensus 480 i~r~~L~~~~~~~~~~~~~~ 499 (499)
T PLN03051 480 LLRRVLRDQLKKELSGRSKL 499 (499)
T ss_pred HHHHHHHHHHHHhhccccCC
Confidence 99999999999999999986
No 6
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-70 Score=573.26 Aligned_cols=493 Identities=20% Similarity=0.244 Sum_probs=382.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++|+++|+++......+.
T Consensus 101 ~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 180 (647)
T PTZ00237 101 KVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEI 180 (647)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCce
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999998643322222
Q ss_pred ccchhhH---HhcC---CCceEEeeccCC--cc------cccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEE
Q 010344 81 FPLYSKV---AEAG---PLKAVVLPVIGD--DV------GIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINIL 146 (512)
Q Consensus 81 ~~~~~~~---~~~~---~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 146 (512)
.+....+ .... ...++++..... .. .....+....|++++..................++++++|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Il 260 (647)
T PTZ00237 181 ITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYIL 260 (647)
T ss_pred echHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEE
Confidence 2222222 2211 112222211110 00 00011233567777653221001111122334678999999
Q ss_pred ecCCCCCCCceEEecCch-hHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCC-c----hhh
Q 010344 147 FSSGTTGEPKAIPWTQLS-PIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSP-L----ERS 220 (512)
Q Consensus 147 ~TSGtTG~pK~v~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~-~----~~~ 220 (512)
|||||||.||||+++|.+ +..........+....++++++..|++|+.+...+++++..|++++++++.. . +..
T Consensus 261 yTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~ 340 (647)
T PTZ00237 261 YTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDD 340 (647)
T ss_pred EcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHH
Confidence 999999999999999998 4433333333456677899999999999987767889999999999987532 1 578
Q ss_pred HHHHHHhcCceEEecchHHHHHHHccCC-----CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccc
Q 010344 221 FGKFVQDSGVSVLGTVPSLVKAWKNTNC-----LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELAS 295 (512)
Q Consensus 221 ~~~~l~~~~~t~l~~~P~~~~~l~~~~~-----~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 295 (512)
+++.++++++|++.++|++++.|++... ....++++||.++++|+++++++.+++++.+ ++++.+.||+||+++
T Consensus 341 ~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~ 419 (647)
T PTZ00237 341 LWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGI 419 (647)
T ss_pred HHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhCh
Confidence 9999999999999999999999987532 2345789999999999999999999999887 689999999999986
Q ss_pred eecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCcccccccccccc-cccccc-cccCcceeEEecCCcccCce
Q 010344 296 SYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYL-GATDRL-LNADHEEVYFSGMPIYKGMH 373 (512)
Q Consensus 296 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 373 (512)
.++..........+++|.|+++++++|+|++|++++.|+ .|||+++.... +...+| .+++.+..+|. ..+|
T Consensus 420 ~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge--~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~-----~~~g 492 (647)
T PTZ00237 420 TYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVNE--IGEVAFKLPMPPSFATTFYKNDEKFKQLFS-----KFPG 492 (647)
T ss_pred hhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCCC--ceEEEEeccCCchhhCceeCCHHHHHHHHh-----CCCC
Confidence 544332222233478999999999999999999999998 69999943211 211222 23333333442 2257
Q ss_pred eeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCC--
Q 010344 374 LRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFT-- 451 (512)
Q Consensus 374 ~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~-- 451 (512)
||+|||+|++|++|+++|+||+||+||++|++|+|.|||++|. +||.|.+++|++++++..+ +.++++|+++++..
T Consensus 493 ~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~-~~p~V~eaavvg~~~~~~g-~~~~a~Vv~~~~~~~~ 570 (647)
T PTZ00237 493 YYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSIL-KHPLVLECCSIGIYDPDCY-NVPIGLLVLKQDQSNQ 570 (647)
T ss_pred EEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHH-hCCCceeeEEEeeEcCCCC-CEEEEEEEeccCcccc
Confidence 9999999999999999999999999999999999999999998 8999999999999999888 89999999985421
Q ss_pred CCcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 452 SQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 452 ~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
..+.+++.+.|++.++++|++|++|+.|+++++||+|++||++|+.|++++..
T Consensus 571 ~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~ 623 (647)
T PTZ00237 571 SIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLND 623 (647)
T ss_pred CCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcC
Confidence 14567888899999999999999999999999999999999999999999754
No 7
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-69 Score=554.55 Aligned_cols=469 Identities=25% Similarity=0.258 Sum_probs=384.0
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+||.++..++.+++++++++.+++++.. .
T Consensus 48 ~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~------~ 121 (534)
T COG0318 48 ANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEF------A 121 (534)
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccc------h
Confidence 68999999999 9999999999999999999999999999999999999999999999999999999999742 1
Q ss_pred cchhhHHhcCCCceEEeeccCCcccccccccC-ccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQD-VSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
+....+....+....+........ .. .++.+....... .........++++++++|||||||.||||++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~ 191 (534)
T COG0318 122 ALLEAVAEALPVVLVVLLVGDADD------RLPITLEALAAEGPG----PDADARPVDPDDLAFLLYTSGTTGLPKGVVL 191 (534)
T ss_pred hHHHHHhccCCcceEEEecccccc------cccccHHHHhhccCC----cccccCCCCCCCEEEEEeCCCCCCCCCEeEE
Confidence 233333333322222222111100 00 245555332221 1111111568899999999999999999999
Q ss_pred cCchhHHHHHHhhcccc--ccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecC-CCchhhHHHHHHhcCceEEecc
Q 010344 161 TQLSPIRCAAEAWGHID--MKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHG-SPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
||+++..+.......++ +.+.|++++++|++|.+|+.. ++..++.|+++++.++ .++++.++..+.++++|++.++
T Consensus 192 th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~v 271 (534)
T COG0318 192 THRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGV 271 (534)
T ss_pred ecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecc
Confidence 99999999888888888 899999999999999999987 5555899999988764 5788999999999999999999
Q ss_pred hHHHHHHHccCCCCCCCcCc-eeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-CCcccccccc
Q 010344 237 PSLVKAWKNTNCLQGLDWTK-IRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ-PQAFGAFSTA 314 (512)
Q Consensus 237 P~~~~~l~~~~~~~~~~l~~-l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~p 314 (512)
|+++..|+........++++ +|.++.||+++++++.+.+++.++..++.+.||+||+++.++...... ....+++|.|
T Consensus 272 Pt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~ 351 (534)
T COG0318 272 PTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRP 351 (534)
T ss_pred hHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCccccc
Confidence 99999999887766666665 999999999999999999999996568999999999998766665544 2356777999
Q ss_pred cCCccEEEeCCCCC-CCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEE
Q 010344 315 TMTTGFVILDELGV-PYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQ 392 (512)
Q Consensus 315 ~~~~~~~i~d~~~~-~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~ 392 (512)
.|+++++|+|+++. ++| |+ +|||++ ++.++.+|. .+++.+...|. +++||+|||+|++|++|+++|+
T Consensus 352 ~pg~~v~Ivd~~~~~~~p-g~--vGei~irgp~v~~GY~--~~pe~t~~~f~------~~gW~~TGDlg~~d~~G~l~i~ 420 (534)
T COG0318 352 LPGVEVRIVDPDGGEVLP-GE--VGEIWVRGPNVMKGYW--NRPEATAEAFD------EDGWLRTGDLGYVDEDGYLYIV 420 (534)
T ss_pred CCCcEEEEEeCCCCccCC-CC--ceEEEEECchhhhhhc--CChHHHHHhhc------cCCeeeecceEEEcCCccEEEE
Confidence 99999999996665 556 77 799999 666665422 12233333332 2589999999999999999999
Q ss_pred eccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCC-CCcHHHHHHHHHHHHHhccC
Q 010344 393 GRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFT-SQPVDKLKMIFSKAIQRNLN 471 (512)
Q Consensus 393 gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~-~~~~~~l~~~~~~~~~~~l~ 471 (512)
||.+|+|+++|++|+|.+||.++. +||.|.+++|++++++..| +.++|+|+++++.. ..+.+++.++++ .+++
T Consensus 421 gR~kd~I~~gG~ni~p~eiE~~l~-~~~~V~~aavvgvpd~~~G-e~~~a~v~~~~~~~~~~~~~~i~~~~~----~~l~ 494 (534)
T COG0318 421 GRLKDLIISGGENIYPEEIEAVLA-EHPAVAEAAVVGVPDERWG-ERVVAVVVLKPGGDAELTAEELRAFLR----KRLA 494 (534)
T ss_pred eccceEEEeCCeEECHHHHHHHHH-hCCCcceEEEEeCCCCccC-ceEEEEEEEcCCCCCCCCHHHHHHHHH----hhhh
Confidence 999999999999999999999998 9999999999999999999 99999999987631 145666666665 5788
Q ss_pred CccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 472 PLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 472 ~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
.|+.|+.|+++++||+|++||++|+.|++.+.+
T Consensus 495 ~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 495 LYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred cccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 999999999999999999999999999999987
No 8
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5e-69 Score=563.72 Aligned_cols=488 Identities=23% Similarity=0.316 Sum_probs=384.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++..++++++|+++|+++......+.
T Consensus 129 ~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~ 208 (666)
T PLN02654 129 RVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKT 208 (666)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcc
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999999865544333
Q ss_pred ccchhhHH---hcCC----CceEEeeccCCc-c---ccc-ccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEec
Q 010344 81 FPLYSKVA---EAGP----LKAVVLPVIGDD-V---GIQ-LRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFS 148 (512)
Q Consensus 81 ~~~~~~~~---~~~~----~~~~~~~~~~~~-~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 148 (512)
.+....+. .... ....++...... . ... .......|+++..... ...+.....++++++|+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~~ilyT 283 (666)
T PLN02654 209 INLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYP-----TKCEVEWVDAEDPLFLLYT 283 (666)
T ss_pred cchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCC-----CCCCceecCCCCceEEEec
Confidence 32222221 1110 001111111000 0 000 0011233555543211 1112223467899999999
Q ss_pred CCCCCCCceEEecCchhHHH-HHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCC---CchhhHHH
Q 010344 149 SGTTGEPKAIPWTQLSPIRC-AAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGS---PLERSFGK 223 (512)
Q Consensus 149 SGtTG~pK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~ 223 (512)
|||||.||||+++|.+++.. .......+++.++|++++..|++|+++... ++++|+.|++++++++. .++..+++
T Consensus 284 SGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~ 363 (666)
T PLN02654 284 SGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWD 363 (666)
T ss_pred CCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHH
Confidence 99999999999999997643 344445678899999999999999999755 78999999999998753 36789999
Q ss_pred HHHhcCceEEecchHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhCC--CCeeeecCCccccceecc
Q 010344 224 FVQDSGVSVLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAYY--KPIIECCGGTELASSYIQ 299 (512)
Q Consensus 224 ~l~~~~~t~l~~~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~--~~i~~~yG~tE~~~~~~~ 299 (512)
.|+++++|++.++|++++.|++... ....++++||.++++||++++++.+++.+.++. +++.+.||+||+++..+.
T Consensus 364 ~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~ 443 (666)
T PLN02654 364 IVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMIT 443 (666)
T ss_pred HHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeec
Confidence 9999999999999999999987643 245678999999999999999999999988853 679999999999876543
Q ss_pred cCC-CCCCcccccccccCCccEEEeCCCCCCCCCCCCcccccccccccccccccccc-cCcce-eEEecCCcccCceeee
Q 010344 300 GSM-LQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLN-ADHEE-VYFSGMPIYKGMHLRR 376 (512)
Q Consensus 300 ~~~-~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ 376 (512)
... ..+...+++|.|.+|++++|+|++|++++.++ .|||+++.+..+...+|.+ ++.+. .||. ..+|||+
T Consensus 444 ~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~--~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~-----~~~g~~~ 516 (666)
T PLN02654 444 PLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGEC--SGYLCVKKSWPGAFRTLYGDHERYETTYFK-----PFAGYYF 516 (666)
T ss_pred cCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCC--ceEEEEcCCCchhhhhhcCChHHHHHhhhh-----cCCCEEE
Confidence 322 12446789999999999999999999998887 6999995432222223333 22222 2221 2357999
Q ss_pred ecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHH
Q 010344 377 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVD 456 (512)
Q Consensus 377 TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~ 456 (512)
|||+|++|+||+++|+||+||+||++|++|+|.|||++|. +||+|.+++|++++++..| +.++++|+++++.. . .+
T Consensus 517 TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~-~~p~V~eaaVvg~~d~~~g-e~~~a~Vvl~~~~~-~-~~ 592 (666)
T PLN02654 517 SGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGIEHEVKG-QGIYAFVTLVEGVP-Y-SE 592 (666)
T ss_pred eCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEeeEcCCCC-eEEEEEEEECCCCC-C-CH
Confidence 9999999999999999999999999999999999999998 8999999999999999888 89999999988754 3 34
Q ss_pred HHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 457 KLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 457 ~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
++.+.++++++++|++|+.|+.|+++++||+|.+||++|+.|++.+.+.
T Consensus 593 ~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~ 641 (666)
T PLN02654 593 ELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 641 (666)
T ss_pred HHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC
Confidence 6778888889999999999999999999999999999999999998753
No 9
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=9.3e-68 Score=552.87 Aligned_cols=489 Identities=24% Similarity=0.362 Sum_probs=381.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.
T Consensus 92 ~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 171 (628)
T TIGR02316 92 EVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKV 171 (628)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcc
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999998754333232
Q ss_pred ccchhhH---HhcC---CCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 81 FPLYSKV---AEAG---PLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 81 ~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
.+....+ .... ...++++....... .........|.++...... ...+.....++++++|+|||||||.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~ 246 (628)
T TIGR02316 172 IPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM-RLIPGRDVDYAALRTQHED----AQVPVEWLESNEPSYILYTSGTTGK 246 (628)
T ss_pred cccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCccccHHHHhhcccc----CCCCceecCCCCcEEEEECCCCCCC
Confidence 2222222 2211 12233332111100 0011123456666543221 1111222457889999999999999
Q ss_pred CceEEecCchhHHH-HHHhhccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCC---CchhhHHHHHHhcC
Q 010344 155 PKAIPWTQLSPIRC-AAEAWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGS---PLERSFGKFVQDSG 229 (512)
Q Consensus 155 pK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~ 229 (512)
||||+++|.++... .......+++.++|++++..|++|..++. .++++|+.|+++++.++. .++..+++.+++++
T Consensus 247 PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~ 326 (628)
T TIGR02316 247 PKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYG 326 (628)
T ss_pred CceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhC
Confidence 99999999997644 33444567889999999999999999875 488999999999998753 35788999999999
Q ss_pred ceEEecchHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC---C
Q 010344 230 VSVLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML---Q 304 (512)
Q Consensus 230 ~t~l~~~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~---~ 304 (512)
+|+++++|++++.|.+... ....++++||.+++|||++++++.+++.+.+ +.++++.||+||++..++..... .
T Consensus 327 vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~~~~ 405 (628)
T TIGR02316 327 VRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGLDLK 405 (628)
T ss_pred CeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCCCcC
Confidence 9999999999998876542 2456789999999999999999999998877 68899999999998544332211 1
Q ss_pred CCcccccccccCCccEEEeCC-CCCCCCCCCCcccccccccccc-cccccccccC-cc-eeEEecCCcccCceeeeecce
Q 010344 305 PQAFGAFSTATMTTGFVILDE-LGVPYPDDQPCVGEVGLFPLYL-GATDRLLNAD-HE-EVYFSGMPIYKGMHLRRHGDI 380 (512)
Q Consensus 305 ~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~~~Gel~v~~~~~-~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~TGD~ 380 (512)
....+++|.|+++++++|+|+ +|++++.|+ .|||+++.+.. +...+|.+.+ .. +.||.. .+++||+|||+
T Consensus 406 ~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~--~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~TGD~ 479 (628)
T TIGR02316 406 PVKLGSPGLPMYGYHLRVLDEATGRPCGPNE--KGVLTVVPPLPPGCLSTVWGDDARFLKTYWSH----FKRPLYSSFDW 479 (628)
T ss_pred CCCCCCcccCcCCceEEEEECCCCCCCCCCC--cEEEEEecCCCccccccccCChHHHHHhhhhc----CCCCEEECCce
Confidence 234578999999999999997 799999998 69999943221 2212222222 11 222221 23579999999
Q ss_pred EEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCC---CcHHH
Q 010344 381 IKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTS---QPVDK 457 (512)
Q Consensus 381 ~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~---~~~~~ 457 (512)
|++|+||+++++||.||+||++|++|+|.|||++|. +||+|.+++|++++++..+ +.++++|+++++... .+...
T Consensus 480 g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~-~~p~V~ea~Vvg~~d~~~g-~~~~~~vv~~~~~~~~~~~~~~~ 557 (628)
T TIGR02316 480 GIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVS-SHPSVAEVAVVGVHDELKG-QVAVVFAILKESDSAGDAHDPHA 557 (628)
T ss_pred EEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeeecCCCC-eEEEEEEEEcCCcccccccchHH
Confidence 999999999999999999999999999999999998 8999999999999999888 899999998865431 12346
Q ss_pred HHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 458 LKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 458 l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+.+.+++++.++|++|++|+.|+++++||+|++||++|+.|++.+.+
T Consensus 558 ~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~ 604 (628)
T TIGR02316 558 VETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEG 604 (628)
T ss_pred HHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcC
Confidence 77888899999999999999999999999999999999999998764
No 10
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2.8e-67 Score=550.12 Aligned_cols=487 Identities=26% Similarity=0.411 Sum_probs=384.7
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.
T Consensus 97 ~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 176 (625)
T TIGR02188 97 EVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKV 176 (625)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcc
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999998764433332
Q ss_pred ccc---hhhHHhcCC--Cc-eEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 81 FPL---YSKVAEAGP--LK-AVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 81 ~~~---~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
.+. +.......+ .. .+++......... .......|++++..... ........++++++|+|||||||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~il~TSGTTG~ 250 (625)
T TIGR02188 177 IPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPW-VEGRDVWWHDLMAKASA-----YCEPEPMDSEDPLFILYTSGSTGK 250 (625)
T ss_pred cchHHHHHHHHHhCCCCccEEEEEcCCCCCcCc-cccccccHHHHHhhcCC-----CCCceecCCCCceEEEecCCCCCC
Confidence 222 222222222 11 2222211111000 01123456666544221 122234567889999999999999
Q ss_pred CceEEecCchhHHHHHH-hhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCC---CchhhHHHHHHhcC
Q 010344 155 PKAIPWTQLSPIRCAAE-AWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGS---PLERSFGKFVQDSG 229 (512)
Q Consensus 155 pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~ 229 (512)
||||+++|.++...... ....+++.++|++++..|++|+.+... ++.++..|++++++++. .++..+++.+++++
T Consensus 251 PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~ 330 (625)
T TIGR02188 251 PKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHK 330 (625)
T ss_pred CCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhC
Confidence 99999999998655433 334567889999999999999988754 88999999999998643 35789999999999
Q ss_pred ceEEecchHHHHHHHccCCC--CCCCcCceeEEEeecCCCCchhhHHHHHhhCC--CCeeeecCCccccceecccCCC-C
Q 010344 230 VSVLGTVPSLVKAWKNTNCL--QGLDWTKIRSFASTGETSNVDDDLWLASKAYY--KPIIECCGGTELASSYIQGSML-Q 304 (512)
Q Consensus 230 ~t~l~~~P~~~~~l~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~--~~i~~~yG~tE~~~~~~~~~~~-~ 304 (512)
+|++.++|++++.|.+.... ...++++||.++++|+++++++.+++.+.++. +++++.||+||+++.++..... .
T Consensus 331 vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~ 410 (625)
T TIGR02188 331 VTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGAT 410 (625)
T ss_pred CeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCC
Confidence 99999999999999876432 34578899999999999999999999888743 7899999999998765443221 2
Q ss_pred CCcccccccccCCccEEEeCCCCCCCC-CCCCcccccccccccccccccccccC-cc-eeEEecCCcccCceeeeecceE
Q 010344 305 PQAFGAFSTATMTTGFVILDELGVPYP-DDQPCVGEVGLFPLYLGATDRLLNAD-HE-EVYFSGMPIYKGMHLRRHGDII 381 (512)
Q Consensus 305 ~~~~~~~G~p~~~~~~~i~d~~~~~~~-~g~~~~Gel~v~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~TGD~~ 381 (512)
....+++|.|+++++++|+|++|++++ .|+ .|||+++..+.+...+|.+.+ .+ ..++. ..++||+|||+|
T Consensus 411 ~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~--~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~-----~~~g~~~TGDl~ 483 (625)
T TIGR02188 411 PTKPGSATLPFFGIEPAVVDEEGNPVEGPGE--GGYLVIKQPWPGMLRTIYGDHERFVDTYFS-----PFPGYYFTGDGA 483 (625)
T ss_pred CcCCCcccCCcCCceEEEECCCCCCCCCCCC--eEEEEEccCCCcccccccCChHHHHHHHhc-----cCCCEEECCceE
Confidence 345678999999999999999999999 888 699999543222222333322 11 12221 235699999999
Q ss_pred EEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHH
Q 010344 382 KRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMI 461 (512)
Q Consensus 382 ~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~ 461 (512)
++|+||+++++||+||+||++|++|+|.+||++|. .||.|.+++|++.+++..+ +.++++|+++++.. ...++.+.
T Consensus 484 ~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~~~~~g-~~~~a~vv~~~~~~--~~~~~~~~ 559 (625)
T TIGR02188 484 RRDKDGYIWITGRVDDVINVSGHRLGTAEIESALV-SHPAVAEAAVVGIPDDIKG-QAIYAFVTLKDGYE--PDDELRKE 559 (625)
T ss_pred EEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEEEEEeCCCCC--CCHHHHHH
Confidence 99999999999999999999999999999999998 8999999999999998888 89999999987654 23456678
Q ss_pred HHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 462 FSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 462 ~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
++++++++|+++++|+.|+++++||+|++||++|+.|++++...
T Consensus 560 l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 560 LRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred HHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 88888899999999999999999999999999999999998765
No 11
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-67 Score=542.71 Aligned_cols=462 Identities=20% Similarity=0.193 Sum_probs=375.3
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++...
T Consensus 83 ~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~----- 157 (549)
T PRK07788 83 QSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFT----- 157 (549)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999997532
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
..+..+.........+........ ....+...++++...... .+.....+++++++|||||||.||+|++
T Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~TSGTTG~PKgv~~ 227 (549)
T PRK07788 158 -DLLSALPPDLGRLRAWGGNPDDDE--PSGSTDETLDDLIAGSST-------APLPKPPKPGGIVILTSGTTGTPKGAPR 227 (549)
T ss_pred -HHHHhhccccccceEEEEecCccc--cCCcCcccHHHHhcCCCC-------CCCCCCCCCCcEEEECCCCCCCCCEEec
Confidence 122222111111111111111000 111344567777654322 1112245678999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
+|.++...+......+++..++++++..|++|..++..++.++..|+++++.. ..+++.+++.++++++|++.++|+++
T Consensus 228 s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~ 306 (549)
T PRK07788 228 PEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLRR-RFDPEATLEDIAKHKATALVVVPVML 306 (549)
T ss_pred cCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEECC-CCCHHHHHHHHHHhCCcEEEEHHHHH
Confidence 99999988888777788899999999999999999987888999999998864 67889999999999999999999999
Q ss_pred HHHHccCCC--CCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 241 KAWKNTNCL--QGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 241 ~~l~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
..|++.... ...+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++..............+++|.|++++
T Consensus 307 ~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~ 385 (549)
T PRK07788 307 SRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGV 385 (549)
T ss_pred HHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCcchhchhhccChhhhhhcCCCcccCCCCc
Confidence 999887544 456788999999999999999999999887 57899999999998654443322233457899999999
Q ss_pred cEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCc
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADD 397 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d 397 (512)
+++|+|+++++++.|+ .|||++ ++..+.+ |.+.+.. ...++||+|||+|++|++|++++.||.||
T Consensus 386 ~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~g---Y~~~~~~---------~~~~g~~~TGDl~~~~~~g~l~~~GR~dd 451 (549)
T PRK07788 386 TVKILDENGNEVPRGV--VGRIFVGNGFPFEG---YTDGRDK---------QIIDGLLSSGDVGYFDEDGLLFVDGRDDD 451 (549)
T ss_pred EEEEECCCcCCCCCCC--eEEEEEeCCCcccc---ccCCCcc---------cccCCceecCceEEEcCCCCEEEeccCcc
Confidence 9999999999999999 699999 4433332 2222211 12357999999999999999999999999
Q ss_pred eeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcccee
Q 010344 398 TMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVS 477 (512)
Q Consensus 398 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~ 477 (512)
+||++|++|+|.+||++|. ++|.|.+++|++.+++..+ +.++++|+++++.. .+.+++.+++ +++|++|++|.
T Consensus 452 ~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a~vv~~~~~~-~~~~~l~~~~----~~~l~~~~~P~ 524 (549)
T PRK07788 452 MIVSGGENVFPAEVEDLLA-GHPDVVEAAVIGVDDEEFG-QRLRAFVVKAPGAA-LDEDAIKDYV----RDNLARYKVPR 524 (549)
T ss_pred eEEECCEEECHHHHHHHHH-hCCCeeEEEEECCcCcccc-cEEEEEEEeCCCCC-CCHHHHHHHH----HHhhhcCCCCc
Confidence 9999999999999999998 8999999999999998888 89999999987654 5665555555 46778899999
Q ss_pred eEEEecCCCCCCCchHHHHHHHHH
Q 010344 478 LVKIVLEFPRTASNKLLRRVLKDQ 501 (512)
Q Consensus 478 ~i~~~~~iP~t~~GKi~r~~l~~~ 501 (512)
.|+++++||+|++||++|++|+++
T Consensus 525 ~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 525 DVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEEeCCCCCCCCcCEeHHHhhcc
Confidence 999999999999999999999753
No 12
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-67 Score=514.43 Aligned_cols=490 Identities=30% Similarity=0.379 Sum_probs=412.1
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
+.++|+.|... +++||+|++++|+.++++++++||+++|++.+++-..++..++..++.+++||+|++.+......+..
T Consensus 106 v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i 185 (626)
T KOG1175|consen 106 VVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSI 185 (626)
T ss_pred HHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCcc
Confidence 56889999977 99999999999999999999999999999999999999999999999999999999999888777777
Q ss_pred cchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWT 161 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s 161 (512)
+....+.+.......+........-.........|++++..... ..++...+.+|+.+|+|||||||.||++.++
T Consensus 186 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~-----~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht 260 (626)
T KOG1175|consen 186 NLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASP-----EHPCVPVKAEDPLFILFTSGTTGKPKGVIHT 260 (626)
T ss_pred chhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCC-----CCCceecCccCceEEEecCCCCCCCCceeec
Confidence 76666665554333222111111111112234566766555554 2335667889999999999999999999999
Q ss_pred Cchh-HHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCC-chhhHHHHHHhcCceEEecchH
Q 010344 162 QLSP-IRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSP-LERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 162 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~-~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+... +..+.....++.++++|++++...+.|+.+.+. ++++|++|+++++++..+ ++..+++.+.++++|++++.|+
T Consensus 261 ~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt 340 (626)
T KOG1175|consen 261 TGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPT 340 (626)
T ss_pred cCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccH
Confidence 8764 455555566789999999999999999999877 888999999999998766 8899999999999999999999
Q ss_pred HHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-CCccccccccc
Q 010344 239 LVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ-PQAFGAFSTAT 315 (512)
Q Consensus 239 ~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~p~ 315 (512)
.++.|.+... ...+++++||.+.+.||++.++..+++.+.+...+|++.||+||+|..++.+.... +..+++.+.|.
T Consensus 341 ~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~ 420 (626)
T KOG1175|consen 341 AYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPF 420 (626)
T ss_pred HHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCC
Confidence 9998766543 33445578999999999999999999999884447999999999999888777766 78899999999
Q ss_pred CCccEEEeCCCCCCCCCCCCcccccccccccc-cccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEec
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGLFPLYL-GATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGR 394 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR 394 (512)
+++.+.|+|++|++++.++ +.|+|++.+..+ +....+.++.. +|++..+..-.|+|.|||.+++|+||++++.||
T Consensus 421 ~g~~v~i~de~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~e---rf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR 496 (626)
T KOG1175|consen 421 PGYDVQILDENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHE---RFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGR 496 (626)
T ss_pred CCcceEEECCCCCCcCCCC-ceeEEEEeCCCCccccccccCCHH---HhhhhhcccCCceEEecCceEEcCCceEEEEec
Confidence 9999999999999998865 479999965555 44443333322 222222234457899999999999999999999
Q ss_pred cCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcc
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLF 474 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 474 (512)
.||+|+++|.++++.|||+++. +||.|.|++|++.+++..| +.+.+||+++++. .+.++|++.|++++++.+++|+
T Consensus 497 ~DDviNvsGhRigtaEIE~al~-~hp~VaEsAvVg~p~~~~g-e~v~aFvvl~~g~--~~~~~L~kel~~~VR~~igp~a 572 (626)
T KOG1175|consen 497 VDDVINVSGHRIGTAEIESALV-EHPAVAESAVVGSPDPIKG-EVVLAFVVLKSGS--HDPEQLTKELVKHVRSVIGPYA 572 (626)
T ss_pred ccccccccceeecHHHHHHHHh-hCcchhheeeecCCCCCCC-eEEEEEEEEcCCC--CChHHHHHHHHHHHHhhcCccc
Confidence 9999999999999999999998 9999999999999999998 9999999999984 6889999999999999999999
Q ss_pred ceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 475 KVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 475 ~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
.|+.|.+++.||+|.+||+.|+.|++....+
T Consensus 573 ~P~~I~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 573 VPRLIVFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred ccceeEecCCCCccccchhHHHHHHHHhccC
Confidence 9999999999999999999999999998765
No 13
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-66 Score=546.71 Aligned_cols=487 Identities=27% Similarity=0.376 Sum_probs=380.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.
T Consensus 123 ~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 202 (655)
T PRK03584 123 QVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKA 202 (655)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcc
Confidence 478999999999 9999999999999999999999999999999999999999999999999999999998764433222
Q ss_pred ccch---hhHHhcCCC--ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010344 81 FPLY---SKVAEAGPL--KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 81 ~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~p 155 (512)
.+.. ..+....+. ..+++.................|++++..... ..........+++++|+|||||||.|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~P 278 (655)
T PRK03584 203 FDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALLWEDFLAPAEA----AELEFEPVPFDHPLWILYSSGTTGLP 278 (655)
T ss_pred cchHHHHHHHHhcCCCccEEEEEecCCCcccccccCCcccHHHHhhcccc----CCCCceecCCCCcEEEEecCCCCCCC
Confidence 2222 222232222 22222211110011112234567777652221 11122334678899999999999999
Q ss_pred ceEEecCchhHHH-HHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC---CchhhHHHHHHhcCce
Q 010344 156 KAIPWTQLSPIRC-AAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS---PLERSFGKFVQDSGVS 231 (512)
Q Consensus 156 K~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~~t 231 (512)
|||+++|.+++.+ .......+++.++|++++..++.|+.+. .++++++.|+++++.++. .++..+++.++++++|
T Consensus 279 KgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt 357 (655)
T PRK03584 279 KCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVT 357 (655)
T ss_pred ceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCE
Confidence 9999999987644 4444556788999999999999887553 367899999999998643 3678999999999999
Q ss_pred EEecchHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhC-CCCeeeecCCccccceecccCCCCCCcc
Q 010344 232 VLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAY-YKPIIECCGGTELASSYIQGSMLQPQAF 308 (512)
Q Consensus 232 ~l~~~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~ 308 (512)
++.++|+++..+.+... ....++++||.++++|+++++++.+++.+.++ +.++.+.||+||++..+.......+...
T Consensus 358 ~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~ 437 (655)
T PRK03584 358 VFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYR 437 (655)
T ss_pred EEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCC
Confidence 99999999998876432 23467899999999999999999999998873 5789999999998654433322234456
Q ss_pred cccccccCCccEEEeCCCCCCCCCCCCcccccccccccccccccccccCcc----eeEEecCCcccCceeeeecceEEEe
Q 010344 309 GAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHE----EVYFSGMPIYKGMHLRRHGDIIKRT 384 (512)
Q Consensus 309 ~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~TGD~~~~~ 384 (512)
+++|.|.+|++++|+|++|+++ .|+ .|||+|+....+...+|.+.+.. ..+|. ...+||+|||+|++|
T Consensus 438 g~~g~p~~g~~~~ivd~~g~~~-~g~--~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~-----~~~g~~~TGDl~~~d 509 (655)
T PRK03584 438 GEIQCRGLGMAVEAWDEDGRPV-VGE--VGELVCTKPFPSMPLGFWNDPDGSRYRDAYFD-----TFPGVWRHGDWIEIT 509 (655)
T ss_pred CccCCCcCCceeEEECCCCCCC-CCC--ceEEEEccCCCCCcceeeCCCccchHHHhhhc-----cCCCEeecCCeEEEC
Confidence 8899999999999999999998 677 69999954322222233333221 12222 224588999999999
Q ss_pred CCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHH
Q 010344 385 VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSK 464 (512)
Q Consensus 385 ~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~ 464 (512)
+||+++|+||.||+||++|++|+|.|||++|. +||.|.+++|++.+++..+ +.++++|+++++.. . .+++.+.+++
T Consensus 510 ~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~-~~p~V~ea~vvg~~~~~~g-~~~~a~vv~~~~~~-~-~~~~~~~l~~ 585 (655)
T PRK03584 510 EHGGVVIYGRSDATLNRGGVRIGTAEIYRQVE-ALPEVLDSLVIGQEWPDGD-VRMPLFVVLAEGVT-L-DDALRARIRT 585 (655)
T ss_pred CCCeEEEEeeccCeeecCcEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-EEEEEEEEECCCCC-C-cHHHHHHHHH
Confidence 99999999999999999999999999999998 8999999999999998888 89999999987643 3 3456778888
Q ss_pred HHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 465 AIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 465 ~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
++.++|++|++|..|+++++||+|++||++|+.|++++.+.
T Consensus 586 ~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~ 626 (655)
T PRK03584 586 TIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGR 626 (655)
T ss_pred HHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 88899999999999999999999999999999999988643
No 14
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.9e-66 Score=543.42 Aligned_cols=486 Identities=26% Similarity=0.342 Sum_probs=375.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++|+++|+++......+.
T Consensus 123 ~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~ 202 (652)
T TIGR01217 123 QVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKE 202 (652)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcc
Confidence 478999999999 9999999999999999999999999999999999999999999999999999999998765433333
Q ss_pred ccchhh---HHhcCCC-c-eEEeeccCCc-ccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 81 FPLYSK---VAEAGPL-K-AVVLPVIGDD-VGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 81 ~~~~~~---~~~~~~~-~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
.+.... +....+. + .+++...... .......+...|+++...... ..........+++++|+|||||||.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~ilyTSGTTG~ 278 (652)
T TIGR01217 203 HDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDLEDFTAAAQA----AELVFEQLPFDHPLWILFSSGTTGL 278 (652)
T ss_pred cchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCcccHHHHHhcccC----CCCCceecCCCCCEEEEEcCCCCCC
Confidence 333332 2222221 1 2222211100 000001133567777653221 1111223456889999999999999
Q ss_pred CceEEecCchhHH-HHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC---CchhhHHHHHHhcCc
Q 010344 155 PKAIPWTQLSPIR-CAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS---PLERSFGKFVQDSGV 230 (512)
Q Consensus 155 pK~v~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~~ 230 (512)
||||+++|.+++. ........+++.++|++++..|+.|+.+. .++.+|..|++++++++. .++..+++.++++++
T Consensus 279 PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~v 357 (652)
T TIGR01217 279 PKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMWN-WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGA 357 (652)
T ss_pred CCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhhH-HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCC
Confidence 9999999998654 34444445788999999999999998643 356899999999998643 257889999999999
Q ss_pred eEEecchHHHHHHHccC--CCCCCCcCceeEEEeecCCCCchhhHHHHHhhC-CCCeeeecCCccccceecccCCCCCCc
Q 010344 231 SVLGTVPSLVKAWKNTN--CLQGLDWTKIRSFASTGETSNVDDDLWLASKAY-YKPIIECCGGTELASSYIQGSMLQPQA 307 (512)
Q Consensus 231 t~l~~~P~~~~~l~~~~--~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~ 307 (512)
|++..+|.++..+.... .....++++||.+++||+++++++.+++.+.++ ...+.+.||+||++..+.......+..
T Consensus 358 t~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~ 437 (652)
T TIGR01217 358 TLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVH 437 (652)
T ss_pred eEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCc
Confidence 99988888877765432 224567899999999999999999999988773 245788999999754333322233445
Q ss_pred ccccccccCCccEEEeCCCCCCCCCCCCcccccccccccccccccccccCc-c---eeEEecCCcccCceeeeecceEEE
Q 010344 308 FGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADH-E---EVYFSGMPIYKGMHLRRHGDIIKR 383 (512)
Q Consensus 308 ~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~TGD~~~~ 383 (512)
.+++|.|.+|++++|+|++|++++ |+ .|||+++....+...+|.+++. + ..||. +.++||+|||+|++
T Consensus 438 ~g~~g~p~~g~~v~ivd~~g~~~~-g~--~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~-----~~~g~~~tGDlg~~ 509 (652)
T TIGR01217 438 IGEIQAPGLGTAVQSWDPEGKPVT-GE--VGELVCTNPMPSMPIRFWNDPDGSKYRDAYFD-----TYPGVWRHGDWITL 509 (652)
T ss_pred CCccCCCcCCCceEEECCCCCCCC-CC--ccEEEEecCCCccccceeCCCccchhHHhhhc-----CCCCEEEcCCcEEE
Confidence 678899999999999999999984 77 6999995432222223333322 1 12222 23468899999999
Q ss_pred eCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHH
Q 010344 384 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFS 463 (512)
Q Consensus 384 ~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~ 463 (512)
|+||+++|+||.||+||++|++|+|.|||++|. +||+|.+++|++++++..+ +.++++|+++++.. . .+++.+.++
T Consensus 510 d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~-~~p~V~eaavvg~~~~~~g-e~~~afVv~~~~~~-~-~~~~~~~l~ 585 (652)
T TIGR01217 510 TPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVE-RLDEVRESLCIGQEQPDGG-YRVVLFVHLAPGAT-L-DDALLDRIK 585 (652)
T ss_pred CCCCcEEEEecccCeEecCCEEcCHHHHHHHHH-hCCCcceEEEEeeecCCCC-EEEEEEEEECCCCC-C-CHHHHHHHH
Confidence 999999999999999999999999999999998 8999999999999998888 89999999987654 3 346677888
Q ss_pred HHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 464 KAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 464 ~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
++++++|++|++|..|+++++||+|++||++|+.|++.+..
T Consensus 586 ~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~ 626 (652)
T TIGR01217 586 RTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQG 626 (652)
T ss_pred HHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcC
Confidence 88889999999999999999999999999999999998753
No 15
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.2e-66 Score=542.06 Aligned_cols=487 Identities=26% Similarity=0.374 Sum_probs=380.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.
T Consensus 107 ~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 186 (637)
T PRK00174 107 EVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKP 186 (637)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcc
Confidence 478999999999 9999999999999999999999999999999999999999999999999999999998754322222
Q ss_pred ccchh---hHHhcCCC-c-eEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010344 81 FPLYS---KVAEAGPL-K-AVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 81 ~~~~~---~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~p 155 (512)
.+... ......+. . .+++......... .......|+++...... ........++++++++|||||||.|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a~i~~TSGTTG~P 260 (637)
T PRK00174 187 IPLKANVDEALANCPSVEKVIVVRRTGGDVDW-VEGRDLWWHELVAGASD-----ECEPEPMDAEDPLFILYTSGSTGKP 260 (637)
T ss_pred cchHHHHHHHHHhCCCccEEEEEcCCCCCcCc-CCCCcccHHHHHhhcCC-----CCCccccCCCCcEEEEECCCCCCCC
Confidence 22222 22222221 2 2222111111000 01123446666543221 1122334568899999999999999
Q ss_pred ceEEecCchhHHHHHH-hhccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCC---CchhhHHHHHHhcCc
Q 010344 156 KAIPWTQLSPIRCAAE-AWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGS---PLERSFGKFVQDSGV 230 (512)
Q Consensus 156 K~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~~ 230 (512)
|+|+++|.+++..... ....+++.++|++++..|++|..++. .++.+|..|+++++.++. .++..+++.|+++++
T Consensus 261 KgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~v 340 (637)
T PRK00174 261 KGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKV 340 (637)
T ss_pred ceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCC
Confidence 9999999998755433 33456788899999999999998875 488999999999997643 357899999999999
Q ss_pred eEEecchHHHHHHHccCCC--CCCCcCceeEEEeecCCCCchhhHHHHHhhCC--CCeeeecCCccccceecccCCC-CC
Q 010344 231 SVLGTVPSLVKAWKNTNCL--QGLDWTKIRSFASTGETSNVDDDLWLASKAYY--KPIIECCGGTELASSYIQGSML-QP 305 (512)
Q Consensus 231 t~l~~~P~~~~~l~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~--~~i~~~yG~tE~~~~~~~~~~~-~~ 305 (512)
|++.++|++++.|++.... ...++++||.++++|+++++++.+++.+.++. +++++.||+||++...+..... ..
T Consensus 341 t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~ 420 (637)
T PRK00174 341 TIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATP 420 (637)
T ss_pred eEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCC
Confidence 9999999999999876432 34567899999999999999999999887743 7899999999998765433221 12
Q ss_pred CcccccccccCCccEEEeCCCCCCCCCCCCccccccccccccccccccccc-Ccce-eEEecCCcccCceeeeecceEEE
Q 010344 306 QAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNA-DHEE-VYFSGMPIYKGMHLRRHGDIIKR 383 (512)
Q Consensus 306 ~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~TGD~~~~ 383 (512)
...+++|.|++|++++|+|++|++++.|+ .|||+++..+.+...+|.+. +.+. .+| ...++||+|||+|++
T Consensus 421 ~~~~~vG~p~~g~~~~i~d~~g~~~~~g~--~Gel~v~g~~p~~~~gy~~~~~~~~~~~~-----~~~~g~~~TGDl~~~ 493 (637)
T PRK00174 421 LKPGSATRPLPGIQPAVVDEEGNPLEGGE--GGNLVIKDPWPGMMRTIYGDHERFVKTYF-----STFKGMYFTGDGARR 493 (637)
T ss_pred cCCCcccCCCCCceEEEECCCCCCCCCCC--cEEEEEcCCCCcccccccCCHHHHHHhhh-----cCCCCEEECCceEEE
Confidence 34578999999999999999999999998 69999953222222222232 2211 122 134579999999999
Q ss_pred eCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHH
Q 010344 384 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFS 463 (512)
Q Consensus 384 ~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~ 463 (512)
|+||+++++||.||+||++|++|+|.+||++|. .||+|.+++|++.+++..+ +.++++|++.++.. . .+++.+.++
T Consensus 494 d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~-~~~~V~~~~Vvg~~~~~~g-~~~~a~vv~~~~~~-~-~~~~~~~l~ 569 (637)
T PRK00174 494 DEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKVAEAAVVGRPDDIKG-QGIYAFVTLKGGEE-P-SDELRKELR 569 (637)
T ss_pred cCCCcEEEEEecccEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEEEEEECCCCC-C-CHHHHHHHH
Confidence 999999999999999999999999999999998 8999999999999998888 89999999987643 2 345666788
Q ss_pred HHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 464 KAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 464 ~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
+++.++|++|+.|..|+++++||+|++||++|+.|++.+.+.
T Consensus 570 ~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 570 NWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred HHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 888899999999999999999999999999999999987654
No 16
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.5e-65 Score=535.72 Aligned_cols=479 Identities=20% Similarity=0.180 Sum_probs=378.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++| +++|+++.++.+++.+++++++++++|++..... ...
T Consensus 67 ~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~-~~~ 144 (632)
T PRK07529 67 DVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPG-TDI 144 (632)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCC-chH
Confidence 368899999999 9999999999999999999999999999 5699999999999999999999999999864310 011
Q ss_pred ccchhhHHhcCCCceEEeeccCCc-cccc-----------ccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEec
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDD-VGIQ-----------LRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFS 148 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 148 (512)
.+.+.......+....++...... .... ...+...|.+.+..... ..........++++++++||
T Consensus 145 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~a~i~~T 221 (632)
T PRK07529 145 WQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRKAHARILDFDAELARQPG---DRLFSGRPIGPDDVAAYFHT 221 (632)
T ss_pred HHHHHHHHhcCCcceeEEEecCcccccccccccccccccccccccCCHHHHHhcCCC---ccccccCCCCcCceEEEEEC
Confidence 112222222222222222211110 0000 11233456665544332 11111223357899999999
Q ss_pred CCCCCCCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCC-C-c---hhhHH
Q 010344 149 SGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGS-P-L---ERSFG 222 (512)
Q Consensus 149 SGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~-~-~---~~~~~ 222 (512)
|||||.||+|++||.++..+.......+++.+++++++.+|++|.+++.. ++.+++.|+++++.+.. . + ...++
T Consensus 222 SGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~ 301 (632)
T PRK07529 222 GGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFW 301 (632)
T ss_pred CCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHH
Confidence 99999999999999999888777666778899999999999999998865 88999999999997532 1 1 35789
Q ss_pred HHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC
Q 010344 223 KFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM 302 (512)
Q Consensus 223 ~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 302 (512)
+.++++++|++.++|+++..|++... ...+++++|.+++||+++++++.+.+++.+ ++++++.||+||++.....+..
T Consensus 302 ~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~ 379 (632)
T PRK07529 302 KIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLRYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNPP 379 (632)
T ss_pred HHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCCc
Confidence 99999999999999999999987652 345788999999999999999999999887 7899999999999876655544
Q ss_pred CCCCcccccccccCCccEEEe--CCCC---CCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeee
Q 010344 303 LQPQAFGAFSTATMTTGFVIL--DELG---VPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRR 376 (512)
Q Consensus 303 ~~~~~~~~~G~p~~~~~~~i~--d~~~---~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (512)
......+++|.|+++++++|+ |++| ++++.|+ .|||++ ++..+.+ |.+++.+...| .+++||+
T Consensus 380 ~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~--~Gel~v~gp~v~~G---Y~~~~~~~~~~------~~~gw~~ 448 (632)
T PRK07529 380 DGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDE--VGVLCIAGPNVFSG---YLEAAHNKGLW------LEDGWLN 448 (632)
T ss_pred cccccCCCcccccCCceEEEEEcCCCCcccccCCCCC--ceEEEEECCCcccc---ccCCccccccc------cCCCceE
Confidence 444467899999999999885 6777 7899998 699999 5555544 33443333333 2468999
Q ss_pred ecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHH
Q 010344 377 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVD 456 (512)
Q Consensus 377 TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~ 456 (512)
|||+|++|+||++++.||.||+||++|++|+|.+||+.|. +||+|.+++|++.+++..| +.++++|++.++.. .+.+
T Consensus 449 TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~-~~p~V~~a~vvg~~d~~~g-e~~~a~v~l~~~~~-~~~~ 525 (632)
T PRK07529 449 TGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALL-RHPAVALAAAVGRPDAHAG-ELPVAYVQLKPGAS-ATEA 525 (632)
T ss_pred cCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceeEEEEEEcCCCC-CCHH
Confidence 9999999999999999999999999999999999999998 8999999999999998888 89999999988765 6777
Q ss_pred HHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 457 KLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 457 ~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
++.+++++++.+ .+++|+.|+++++||+|++||++|+.|++++.+
T Consensus 526 ~l~~~~~~~l~~---~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~~ 570 (632)
T PRK07529 526 ELLAFARDHIAE---RAAVPKHVRILDALPKTAVGKIFKPALRRDAIR 570 (632)
T ss_pred HHHHHHHHhcch---hccCCcEEEEecCCCCCCCCcccHHHHHHHHHH
Confidence 777777654432 468999999999999999999999999998765
No 17
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-65 Score=535.61 Aligned_cols=489 Identities=23% Similarity=0.319 Sum_probs=379.3
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.
T Consensus 93 ~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 172 (629)
T PRK10524 93 EVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKV 172 (629)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcc
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999998754333332
Q ss_pred ccc---hhhHHhcC---CCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 81 FPL---YSKVAEAG---PLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 81 ~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
.+. +....... ....+++....... .........|.++...... ...+.....++++++++|||||||.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~il~TSGTTG~ 247 (629)
T PRK10524 173 VPYKPLLDEAIALAQHKPRHVLLVDRGLAPM-ARVAGRDVDYATLRAQHLG----ARVPVEWLESNEPSYILYTSGTTGK 247 (629)
T ss_pred cccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCCcccHHHHHhcCCC----CCCCceeeCCCCceEEEeecCCCCC
Confidence 222 22222221 12233332111100 0011123456665543221 0111122356889999999999999
Q ss_pred CceEEecCchhHHHHHH-hhccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCC---CchhhHHHHHHhcC
Q 010344 155 PKAIPWTQLSPIRCAAE-AWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGS---PLERSFGKFVQDSG 229 (512)
Q Consensus 155 pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~ 229 (512)
||||+++|.++...... ....+++.++|++++..|+.|..+.. .++.+++.|++++++++. .++..+++.+++++
T Consensus 248 PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~ 327 (629)
T PRK10524 248 PKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYK 327 (629)
T ss_pred CceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcC
Confidence 99999999997654433 33456788999999999999998875 488999999999998753 35788999999999
Q ss_pred ceEEecchHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC---CC
Q 010344 230 VSVLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM---LQ 304 (512)
Q Consensus 230 ~t~l~~~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~---~~ 304 (512)
+|++.++|++++.|.+... ....++++||.++++||++++++.+++.+.+ +.++++.||+||++..+..... ..
T Consensus 328 vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~ 406 (629)
T PRK10524 328 VNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGVEDR 406 (629)
T ss_pred ceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCcccC
Confidence 9999999999998876542 2346788999999999999999999998887 6889999999999853322211 12
Q ss_pred CCcccccccccCCccEEEeCC-CCCCCCCCCCcccccccccccc-cccccccc-cCcc-eeEEecCCcccCceeeeecce
Q 010344 305 PQAFGAFSTATMTTGFVILDE-LGVPYPDDQPCVGEVGLFPLYL-GATDRLLN-ADHE-EVYFSGMPIYKGMHLRRHGDI 380 (512)
Q Consensus 305 ~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~~~Gel~v~~~~~-~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~TGD~ 380 (512)
....+++|.|+++++++|+|+ +|++++.|+ .|||+++.... +...+|.+ ++.. ..||.. .+++||+|||+
T Consensus 407 ~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~--~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~TGDl 480 (629)
T PRK10524 407 PTRLGSPGVPMYGYNVKLLNEVTGEPCGPNE--KGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSL----FGRQVYSTFDW 480 (629)
T ss_pred cCCCCCcccCcCCceEEEEeCCCCCCCCCCC--cEEEEEcCCCChhhcCCccCChHHHHHhhhcc----CCCcEEEcCCc
Confidence 234678999999999999998 899999998 69999943221 11112222 2221 223321 14579999999
Q ss_pred EEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCC---CcHHH
Q 010344 381 IKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTS---QPVDK 457 (512)
Q Consensus 381 ~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~---~~~~~ 457 (512)
|++|+||+++|+||.||+||++|++|+|.+||++|. +||+|.+++|++.+++..+ +.++++|+++++... ....+
T Consensus 481 ~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~d~~~g-~~~~~~vv~~~~~~~~~~~~~~~ 558 (629)
T PRK10524 481 GIRDADGYYFILGRTDDVINVAGHRLGTREIEESIS-SHPAVAEVAVVGVKDALKG-QVAVAFVVPKDSDSLADREARLA 558 (629)
T ss_pred EEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHH-hCCCcceEEEEccccCCCC-eEEEEEEEECCCCccccccchHH
Confidence 999999999999999999999999999999999998 8999999999999998888 899999999875431 12346
Q ss_pred HHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 458 LKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 458 l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+.+.++++++++|++|+.|..|+++++||+|++||++|+.|++.+..
T Consensus 559 ~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 605 (629)
T PRK10524 559 LEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEG 605 (629)
T ss_pred HHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcC
Confidence 77888899999999999999999999999999999999999998754
No 18
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-65 Score=528.81 Aligned_cols=472 Identities=22% Similarity=0.294 Sum_probs=383.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++.......
T Consensus 82 ~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~- 160 (570)
T PRK04319 82 LSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKP- 160 (570)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccc-
Confidence 378899999999 999999999999999999999999999999999999999999999999999999999875421110
Q ss_pred ccchhhHHhcCCC-ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 81 FPLYSKVAEAGPL-KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
. ...+. +..++...... ...+..+|.+++..... ........++++++++|||||||.||+|+
T Consensus 161 -----~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~ 224 (570)
T PRK04319 161 -----A--DDLPSLKHVLLVGEDVE----EGPGTLDFNALMEQASD-----EFDIEWTDREDGAILHYTSGSTGKPKGVL 224 (570)
T ss_pred -----h--hcCCCceEEEEECCCcC----CCcCccCHHHHHhhcCC-----cCCccccCCCCCEEEEeCCCCCCCCCEEE
Confidence 0 01111 11221111100 11233466666544322 11222345688999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
++|+++..+.......+++.++|++++..|++|..+.. .++.++..|+++++.+...++..+++.|+++++|+++++|+
T Consensus 225 ~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~ 304 (570)
T PRK04319 225 HVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPT 304 (570)
T ss_pred EecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHH
Confidence 99999998887777778889999999999999998875 48899999999999877778999999999999999999999
Q ss_pred HHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccC
Q 010344 239 LVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATM 316 (512)
Q Consensus 239 ~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~ 316 (512)
+++.|++... ....+++++|.++++|+++++++.+++++.+ +.++++.||+||++..+...........+++|.|++
T Consensus 305 ~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~ 383 (570)
T PRK04319 305 AIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLP 383 (570)
T ss_pred HHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCC
Confidence 9999987542 2345678999999999999999999998877 688999999999987654433333345678999999
Q ss_pred CccEEEeCCCCCCCCCCCCcccccccccccccccccccc-cCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEecc
Q 010344 317 TTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLN-ADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRA 395 (512)
Q Consensus 317 ~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~ 395 (512)
+++++|+|+++.+++.|+ .|||+++....+...+|.+ ++.+...|. ++||+|||+|+++++|+++++||.
T Consensus 384 g~~~~i~d~~~~~~~~g~--~Gel~i~~~~~~~~~GY~~~~~~~~~~~~-------~gw~~TGDl~~~~~~g~l~~~GR~ 454 (570)
T PRK04319 384 GIEAAIVDDQGNELPPNR--MGNLAIKKGWPSMMRGIWNNPEKYESYFA-------GDWYVSGDSAYMDEDGYFWFQGRV 454 (570)
T ss_pred CCEEEEECCCCCCCCCCC--ceEEEEcCCCChHHhHhcCCHHHhhhhhc-------CCceEeCcEEEECCCeeEEEEecC
Confidence 999999999999999999 6999994321111122222 333333332 469999999999999999999999
Q ss_pred CceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccc
Q 010344 396 DDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFK 475 (512)
Q Consensus 396 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 475 (512)
+|+|+.+|++|+|.+||+.|. +||.|.+++|++.+++..+ +.+.+++++.++.. ..+++.+.++++++++|+.|++
T Consensus 455 ~d~i~~~G~~i~p~eIE~~l~-~~~~V~~~~v~g~~~~~~g-~~~~a~v~~~~~~~--~~~~~~~~l~~~~~~~l~~~~~ 530 (570)
T PRK04319 455 DDVIKTSGERVGPFEVESKLM-EHPAVAEAGVIGKPDPVRG-EIIKAFVALRPGYE--PSEELKEEIRGFVKKGLGAHAA 530 (570)
T ss_pred CCEEEECCEEECHHHHHHHHh-hCCCeeecceecccCcCCc-eEEEEEEEECCCCC--CCHHHHHHHHHHHHHhcccccC
Confidence 999999999999999999998 8999999999999998888 89999999887543 2345667888888899999999
Q ss_pred eeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 476 VSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 476 p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
|..|+++++||+|++||++|++|+++..+
T Consensus 531 P~~i~~v~~iP~t~~GKv~r~~L~~~~~~ 559 (570)
T PRK04319 531 PREIEFKDKLPKTRSGKIMRRVLKAWELG 559 (570)
T ss_pred CcEEEEeCCCCCCCchhhhHHHHHHHHhC
Confidence 99999999999999999999999998753
No 19
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.2e-65 Score=525.38 Aligned_cols=466 Identities=16% Similarity=0.160 Sum_probs=357.1
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
.++++|++|.+ .+||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++...
T Consensus 54 ~~~~lA~~L~~--~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~------ 125 (539)
T PRK06334 54 AVIALATKVSK--YPDQHIGIMMPASAGAYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLM------ 125 (539)
T ss_pred HHHHHHHHHhh--ccCCeEEEEcCCchHHHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHH------
Confidence 36778888876 4999999999999999999999999999999999999999999999999999999987532
Q ss_pred cchhhHHhc---CCCceEEeeccCCcccccccccCccHHHHhhccC--CCCCC---CCCCCCCCCCCCeEEEEecCCCCC
Q 010344 82 PLYSKVAEA---GPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVD--YHPGP---KYYPPVYRPVDSVINILFSSGTTG 153 (512)
Q Consensus 82 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~i~~TSGtTG 153 (512)
..+..+... .+...+.+.... ....+.+...... ..+.. .........++++++++|||||||
T Consensus 126 ~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG 196 (539)
T PRK06334 126 QHLAQTHGEDAEYPFSLIYMEEVR---------KELSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEK 196 (539)
T ss_pred HHHhhhhhccccccccEEEEehhh---------hhccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCC
Confidence 111111111 111122211100 0001111110000 00000 001112345789999999999999
Q ss_pred CCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceE
Q 010344 154 EPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSV 232 (512)
Q Consensus 154 ~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~ 232 (512)
.||+|++||+++..+.......+++.++|++++.+|++|.+++.. ++.++..|+++++.....++..+++.|+++++|+
T Consensus 197 ~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~ 276 (539)
T PRK06334 197 LPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTF 276 (539)
T ss_pred CCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcE
Confidence 999999999999888777777778889999999999999999864 7889999999998765567899999999999999
Q ss_pred EecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccc
Q 010344 233 LGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFS 312 (512)
Q Consensus 233 l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G 312 (512)
+.++|+++..|++.......+++++|.+++||+++++++.+.+.+.+++.++++.||+||++..+...........+++|
T Consensus 277 ~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG 356 (539)
T PRK06334 277 LGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHESCVG 356 (539)
T ss_pred EEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCCCCcCc
Confidence 99999999999876555556788999999999999999999999988788999999999998765544333333456799
Q ss_pred cccCCccEEEeCC-CCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEE
Q 010344 313 TATMTTGFVILDE-LGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYII 390 (512)
Q Consensus 313 ~p~~~~~~~i~d~-~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~ 390 (512)
.|+++++++|+|+ ++.+++.|+ .|||++ ++..+.+ |.+.+....+.. .++++||+|||+|++|++|+++
T Consensus 357 ~p~~g~~v~i~d~~~~~~~~~g~--~Gel~v~g~~~~~G---Y~~~~~~~~~~~----~~~~~w~~TGD~g~~d~~G~l~ 427 (539)
T PRK06334 357 MPIRGMDVLIVSEETKVPVSSGE--TGLVLTRGTSLFSG---YLGEDFGQGFVE----LGGETWYVTGDLGYVDRHGELF 427 (539)
T ss_pred eecCCCEEEEEcCCCCccCCCCc--eEEEEEecCccccc---ccCCccccccee----eCCceeEECCCEEEECCCCeEE
Confidence 9999999999995 578999999 699999 5555443 223222111111 1456899999999999999999
Q ss_pred EEeccCceeeecceecchHHHHHhhhcCCcceee------eeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHH
Q 010344 391 VQGRADDTMNLGGIKTSSVEIERVCDGADESILE------TAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSK 464 (512)
Q Consensus 391 i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~------~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~ 464 (512)
++||.+|+||++|++|+|.|||++|. .||+|.+ ++|++.+++ . ..++++++.. .+.+++.+++
T Consensus 428 ~~GR~~d~ik~~G~~v~p~eIE~~l~-~~~~v~~~~~~~~~~v~~~~~~--~-~~~~~~~~~~-----~~~~~~~~~l-- 496 (539)
T PRK06334 428 LKGRLSRFVKIGAEMVSLEALESILM-EGFGQNAADHAGPLVVCGLPGE--K-VRLCLFTTFP-----TSISEVNDIL-- 496 (539)
T ss_pred EEeccCCeEEECCEEECHHHHHHHHH-HccCCccccccCceEEEcCCCC--c-eEEEEEEecc-----CChHHHHHHH--
Confidence 99999999999999999999999998 8999987 677777642 1 2444444421 3444555444
Q ss_pred HHHhc-cCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhh
Q 010344 465 AIQRN-LNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHEL 506 (512)
Q Consensus 465 ~~~~~-l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~ 506 (512)
.++ ++.|++|+.|+++++||+|++||++|+.|++...+.+
T Consensus 497 --~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 537 (539)
T PRK06334 497 --KNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAKSLF 537 (539)
T ss_pred --HhcCCcccccchheeeecccccccCCcccHHHHHHHHHHhh
Confidence 443 6789999999999999999999999999999876543
No 20
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=3e-64 Score=520.74 Aligned_cols=480 Identities=16% Similarity=0.133 Sum_probs=364.9
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++...
T Consensus 41 ~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~----- 115 (563)
T PLN02860 41 GVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCS----- 115 (563)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccc-----
Confidence 368999999999 99999999999999999999999999999999999999999999999999999999987421
Q ss_pred ccchhhHH-hcCCCceEEeeccCCcccc-cccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVA-EAGPLKAVVLPVIGDDVGI-QLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
.....+. ...+....++......... ........++++...... .........++++++++|||||||.||+|
T Consensus 116 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV 190 (563)
T PLN02860 116 -SWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG----TTELDYAWAPDDAVLICFTSGTTGRPKGV 190 (563)
T ss_pred -hHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccc----cccccCCCCCCCeEEEEecCCCCCCCceE
Confidence 1111111 1111111111111100000 000011111111111000 00111223568899999999999999999
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+++|.++..+.......+++.++|+++...|++|.+++..++.++..|+++++.+ ..++..+++.|+++++|++.++|+
T Consensus 191 ~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~ 269 (563)
T PLN02860 191 TISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLLP-KFDAKAALQAIKQHNVTSMITVPA 269 (563)
T ss_pred EeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEecC-CCCHHHHHHHHHHhCCeeEEeChH
Confidence 9999999887766666778899999999999999999988889999999999875 567899999999999999999999
Q ss_pred HHHHHHccCCC--CCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC------------
Q 010344 239 LVKAWKNTNCL--QGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ------------ 304 (512)
Q Consensus 239 ~~~~l~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~------------ 304 (512)
++..|++.... ....++++|.+++||+++++++.+.+++.+++.++++.||+||+++.+.......
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 349 (563)
T PLN02860 270 MMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQT 349 (563)
T ss_pred HHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhh
Confidence 99999875422 2345789999999999999999999999887889999999999976443221111
Q ss_pred ----------CCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCce
Q 010344 305 ----------PQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMH 373 (512)
Q Consensus 305 ----------~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (512)
.....++|.|+++++++|+|++ .|+ .|||++ ++..+.+| +.+++.+...+ ..+|
T Consensus 350 ~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~-----~g~--~Gel~v~g~~~~~GY--~~~~~~t~~~~------~~~g 414 (563)
T PLN02860 350 VNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE-----SSR--VGRILTRGPHVMLGY--WGQNSETASVL------SNDG 414 (563)
T ss_pred hcccccccccccCCcccCCccCCcEEEEecCC-----CCc--eeEEEEecCcccccc--cCCccccchhc------cCCC
Confidence 0112368999999999999865 456 699999 55544322 22333333322 3468
Q ss_pred eeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCC-
Q 010344 374 LRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTS- 452 (512)
Q Consensus 374 ~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~- 452 (512)
||+|||+|++|++|+++++||.+|+||++|++|+|.+||+++. .||+|.+++|++.++...+ +.++++|+++++..-
T Consensus 415 ~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~ 492 (563)
T PLN02860 415 WLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLS-QHPGVASVVVVGVPDSRLT-EMVVACVRLRDGWIWS 492 (563)
T ss_pred eEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHH-hCCCcceeEEEEEecCcCC-ceEEEEEEECCccccc
Confidence 9999999999999999999999999999999999999999998 8999999999999998888 899999998865210
Q ss_pred --------CcHHHHHHHHHHHHHh-ccCCccceeeEEEe-cCCCCCCCchHHHHHHHHHHHhhhhcc
Q 010344 453 --------QPVDKLKMIFSKAIQR-NLNPLFKVSLVKIV-LEFPRTASNKLLRRVLKDQLKHELSVR 509 (512)
Q Consensus 453 --------~~~~~l~~~~~~~~~~-~l~~~~~p~~i~~~-~~iP~t~~GKi~r~~l~~~~~~~~~~~ 509 (512)
.......+.+++++.+ +|++|++|+.|+++ ++||+|++||++|++|++++.+.+...
T Consensus 493 ~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~~~~~~~~~~ 559 (563)
T PLN02860 493 DNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRREVLSHLQSL 559 (563)
T ss_pred cccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHHHHHHHHhcc
Confidence 0001112345555555 59999999988765 779999999999999999998877654
No 21
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2e-64 Score=529.49 Aligned_cols=478 Identities=16% Similarity=0.114 Sum_probs=366.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+..
T Consensus 87 ~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~----- 161 (651)
T PLN02736 87 ARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTL----- 161 (651)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHH-----
Confidence 368999999999 99999999999999999999999999999999999999999999999999999999987532
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccc-----cccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGI-----QLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~p 155 (512)
+.+..+....+....++......... .......+|+++.+..... ........++++++|+|||||||.|
T Consensus 162 -~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dd~a~IlyTSGTTG~P 236 (651)
T PLN02736 162 -NTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSS----PQPFRPPKPEDVATICYTSGTTGTP 236 (651)
T ss_pred -HHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccC----CCCCCCCCccceEEEEEcCCCCCCC
Confidence 22233333333222222211110000 0011234677776544321 1112234678999999999999999
Q ss_pred ceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 156 KAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 156 K~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
|||++||+++.+++.+....+++.++|++++++|++|.+++..++.++..|+++++.+. ++..+++.|+++++|++++
T Consensus 237 KGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~~~ 314 (651)
T PLN02736 237 KGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQG--DNLKLMDDLAALRPTIFCS 314 (651)
T ss_pred cEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCC--CHHHHHHHHHHhCCcEEec
Confidence 99999999999988888777888999999999999999999888889999999988764 5678999999999999999
Q ss_pred chHHHHHHHccCC----------------------------CCC-------------CCc-CceeEEEeecCCCCchhhH
Q 010344 236 VPSLVKAWKNTNC----------------------------LQG-------------LDW-TKIRSFASTGETSNVDDDL 273 (512)
Q Consensus 236 ~P~~~~~l~~~~~----------------------------~~~-------------~~l-~~l~~i~~~G~~l~~~~~~ 273 (512)
+|.++..+.+... ... ..+ +++|.+++||+++++++.+
T Consensus 315 vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~ 394 (651)
T PLN02736 315 VPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVME 394 (651)
T ss_pred chHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHH
Confidence 9999988754310 000 011 4899999999999999999
Q ss_pred HHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeCC-CCCC---CCCCCCccccccc-cccccc
Q 010344 274 WLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDE-LGVP---YPDDQPCVGEVGL-FPLYLG 348 (512)
Q Consensus 274 ~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~---~~~g~~~~Gel~v-~~~~~~ 348 (512)
++.+.+ ++++++.||+||+++..+.... .....+++|.|+|+++++|+|+ ++.. ..+++ .|||++ ++.++.
T Consensus 395 ~~~~~~-g~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~--~GEl~vrgp~v~~ 470 (651)
T PLN02736 395 FLRICF-GGRVLEGYGMTETSCVISGMDE-GDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYP--RGEICVRGPIIFK 470 (651)
T ss_pred HHHHHh-CCCeEEEechHHhchheeccCC-CCCCCCccCCccCceEEEEEEccccCcccCCCCCC--CceEEecCCcccc
Confidence 998777 6889999999999875543332 3345689999999999999983 3221 22223 499999 666554
Q ss_pred ccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceeee-cceecchHHHHHhhhcCCcceeeeeE
Q 010344 349 ATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDGADESILETAA 427 (512)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~~v~~~~v 427 (512)
+| +.+++.+...| +.+|||+|||+|++|+||+++|+||.||+||+ +|++|+|.+||++|. .||.|.+++|
T Consensus 471 GY--~~~~~~t~~~~------~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~a~V 541 (651)
T PLN02736 471 GY--YKDEVQTREVI------DEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYA-KCKFVAQCFV 541 (651)
T ss_pred cc--ccCHHHHHhhh------ccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHh-cCCCeeEEEE
Confidence 32 22344443333 34689999999999999999999999999996 799999999999998 8999999999
Q ss_pred EeeCCCCCCCceEEEEEEecCCC-------CCCcHH---------HHHHHHHHHHH-----hccCCccceeeEEEecCCC
Q 010344 428 ISVSPAGGGPEVLVICVVLKKGF-------TSQPVD---------KLKMIFSKAIQ-----RNLNPLFKVSLVKIVLEFP 486 (512)
Q Consensus 428 ~~~~~~~~~~~~~~a~v~~~~~~-------~~~~~~---------~l~~~~~~~~~-----~~l~~~~~p~~i~~~~~iP 486 (512)
++. ..+ +.++|+|+++++. ...+.. ++.+.+.+.++ ++|+.|++|+.|.++++.|
T Consensus 542 ~g~---~~~-~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 617 (651)
T PLN02736 542 YGD---SLN-SSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPF 617 (651)
T ss_pred Eec---CCC-ceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCC
Confidence 983 234 7899999987531 002212 22333333332 3699999999999999876
Q ss_pred ------CCCCchHHHHHHHHHHHhhhhc
Q 010344 487 ------RTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 487 ------~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
+|++||++|+.|++.|++++++
T Consensus 618 ~~~~~~lT~~~Ki~R~~i~~~~~~~i~~ 645 (651)
T PLN02736 618 TVENGLLTPTFKVKRPQAKAYFAKAISD 645 (651)
T ss_pred cCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 6999999999999999998874
No 22
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.2e-64 Score=519.40 Aligned_cols=471 Identities=20% Similarity=0.221 Sum_probs=372.1
Q ss_pred cHHHHHHHHhc-c-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCc
Q 010344 2 SYRLVANALDT-M-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 79 (512)
Q Consensus 2 ~~~~~a~~L~~-~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~ 79 (512)
.++++|++|++ . +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.+++++++++....
T Consensus 75 ~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~---- 150 (560)
T PLN02574 75 LVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENV---- 150 (560)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHH----
Confidence 37899999999 8 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred cccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 80 KFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
..+.. .....+.+.... ... ........|.+++..... ........++++++++|||||||.||+|+
T Consensus 151 -----~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~ 217 (560)
T PLN02574 151 -----EKLSP-LGVPVIGVPENY-DFD-SKRIEFPKFYELIKEDFD-----FVPKPVIKQDDVAAIMYSSGTTGASKGVV 217 (560)
T ss_pred -----HHHHh-cCCcEEecCccc-ccc-cCccCcccHHHHhhcCCc-----ccccCCCCcCCEEEEEcCCCccCCCcEEE
Confidence 11111 111111111100 000 001122345555543221 11122345688999999999999999999
Q ss_pred ecCchhHHHHHHhhc----cccc-cCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEE
Q 010344 160 WTQLSPIRCAAEAWG----HIDM-KVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVL 233 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~----~~~~-~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l 233 (512)
+||+++.+.+..... .+.. ...++++..+|++|.+++.. ++.++..|+++++.+ ..++..+++.|+++++|++
T Consensus 218 ~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 296 (560)
T PLN02574 218 LTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMR-RFDASDMVKVIDRFKVTHF 296 (560)
T ss_pred EeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEec-CCCHHHHHHHHHHcCCeEE
Confidence 999999887765432 1222 35678899999999999865 667888899998875 5678999999999999999
Q ss_pred ecchHHHHHHHccCCC-CCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC-CCCCccccc
Q 010344 234 GTVPSLVKAWKNTNCL-QGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM-LQPQAFGAF 311 (512)
Q Consensus 234 ~~~P~~~~~l~~~~~~-~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~~~~~~~~~ 311 (512)
.++|+++..|++.... ...+++++|.+++||+++++++.+.+.+.+++.++++.||+||++.+.+.... ......+++
T Consensus 297 ~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~v 376 (560)
T PLN02574 297 PVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSV 376 (560)
T ss_pred ecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCce
Confidence 9999999999876532 34568899999999999999999999988878899999999999865443222 122345789
Q ss_pred ccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeE
Q 010344 312 STATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYI 389 (512)
Q Consensus 312 G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l 389 (512)
|.|.++++++|+| ++|++++.|+ .|||++ ++..+.+| +.+++.+...| ..++||+|||+|+++++|++
T Consensus 377 G~~~~~~~v~i~d~~~g~~~~~g~--~Gei~v~g~~~~~GY--~~~~~~t~~~~------~~~g~~~TGDlg~~~~~G~l 446 (560)
T PLN02574 377 GLLAPNMQAKVVDWSTGCLLPPGN--CGELWIQGPGVMKGY--LNNPKATQSTI------DKDGWLRTGDIAYFDEDGYL 446 (560)
T ss_pred eeeCCCcEEEEEeCCCCcCCCCCC--CeEEEEECcchhhhh--cCChhHhhhhc------cCCCCcccceEEEEECCCeE
Confidence 9999999999999 7899999999 699999 55544332 22333333333 24579999999999999999
Q ss_pred EEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhc
Q 010344 390 IVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRN 469 (512)
Q Consensus 390 ~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~ 469 (512)
+++||.+|+||++|++|+|.+||++|. .||+|.+++|++.+++..+ +.++++|+.+++.. .+.+++.+ +++++
T Consensus 447 ~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a~v~~~~~~~-~~~~~l~~----~~~~~ 519 (560)
T PLN02574 447 YIVDRLKEIIKYKGFQIAPADLEAVLI-SHPEIIDAAVTAVPDKECG-EIPVAFVVRRQGST-LSQEAVIN----YVAKQ 519 (560)
T ss_pred EEEecchhheEECCEEECHHHHHHHHH-hCCCcceEEEEccccCCCC-cceEEEEEeCCCCC-CCHHHHHH----HHHHh
Confidence 999999999999999999999999998 8999999999999988877 88999999876554 55555544 45577
Q ss_pred cCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhh
Q 010344 470 LNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELS 507 (512)
Q Consensus 470 l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 507 (512)
|++|+.|+.|+++++||+|++||++|+.|++++.+...
T Consensus 520 l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~ 557 (560)
T PLN02574 520 VAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVS 557 (560)
T ss_pred ccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhccc
Confidence 88999999999999999999999999999999876543
No 23
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-64 Score=529.46 Aligned_cols=449 Identities=18% Similarity=0.197 Sum_probs=364.4
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++......
T Consensus 39 ~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~-- 116 (705)
T PRK06060 39 GAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRF-- 116 (705)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhh--
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432100
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
. . . .++ ...++...... ..........++++++++|||||||.||+|++
T Consensus 117 ----~---~---~--~~~----------------~~~~~~~~~~~---~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~ 165 (705)
T PRK06060 117 ----Q---P---S--RVA----------------EAAELMSEAAR---VAPGGYEPMGGDALAYATYTSGTTGPPKAAIH 165 (705)
T ss_pred ----c---c---c--ccc----------------hhhhhhhhccc---cCCCCCCCCCCCCeEEEEECCCCCCCCcEEEE
Confidence 0 0 0 000 01111111000 00001112346789999999999999999999
Q ss_pred cCchhHHHHHHhh-ccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAW-GHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|+++.+.+.... ..+++.++|++++..|++|..++. .++.++..|+++++.+...++..++..++++++|+++++|+
T Consensus 166 sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~ 245 (705)
T PRK06060 166 RHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPN 245 (705)
T ss_pred ccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHH
Confidence 9999988776553 356788999999999999998874 47889999999999876667788899999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
++..|++... ..+++++|.+++|||++++++.+.+.+.+++.++++.||+||++..+..... .....+++|+|++++
T Consensus 246 ~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~iG~p~~~~ 322 (705)
T PRK06060 246 FFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRV-DEWRLGTLGRVLPPY 322 (705)
T ss_pred HHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccC-CCCCcCcccccCCCc
Confidence 9999886542 3457899999999999999999999998877899999999999865543322 223457899999999
Q ss_pred cEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCc
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADD 397 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d 397 (512)
+++|+|+++++++.|+ .|||++ ++....+ |.+... ....+++||+|||+|++++||+++++||.||
T Consensus 323 ~v~i~d~~g~~~~~g~--~GEl~i~g~~v~~G---Y~~~~~--------~~~~~~~~~~TGDl~~~~~dG~l~~~GR~dd 389 (705)
T PRK06060 323 EIRVVAPDGTTAGPGV--EGDLWVRGPAIAKG---YWNRPD--------SPVANEGWLDTRDRVCIDSDGWVTYRCRADD 389 (705)
T ss_pred EEEEECCCCCCCCCCC--ceEEEEccchhhhh---hhCCCc--------ccccCCCcEECCeeEEECCCceEEEecccCc
Confidence 9999999999999999 699999 5544432 222211 1123468999999999999999999999999
Q ss_pred eeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcccee
Q 010344 398 TMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVS 477 (512)
Q Consensus 398 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~ 477 (512)
+||++|++|+|.+||++|. .||.|.+++|++.++...+ +.++++|+..++.. .+. +..+.+++++.++|+.|++|.
T Consensus 390 ~ik~~G~~v~~~eIE~~l~-~~~~V~~a~vv~~~~~~~~-~~~~a~vv~~~~~~-~~~-~~~~~i~~~l~~~L~~~~~P~ 465 (705)
T PRK06060 390 TEVIGGVNVDPREVERLII-EDEAVAEAAVVAVRESTGA-STLQAFLVATSGAT-IDG-SVMRDLHRGLLNRLSAFKVPH 465 (705)
T ss_pred eEEECCEEECHHHHHHHHH-hCCCeeEEEEEeecCccCC-eeEEEEEEeccccC-cCh-HHHHHHHHHHHHhCCCCcCCc
Confidence 9999999999999999998 8999999999999988777 78999999876543 333 233556677788999999999
Q ss_pred eEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 478 LVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 478 ~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
.|+++++||+|++||++|++|++.+.
T Consensus 466 ~i~~v~~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 466 RFAVVDRLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred EEEEeecCCCCcchhhHHHHHHhhcc
Confidence 99999999999999999999998753
No 24
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-63 Score=513.54 Aligned_cols=456 Identities=17% Similarity=0.139 Sum_probs=368.5
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++....
T Consensus 77 ~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~----- 151 (537)
T PRK13382 77 RSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFS----- 151 (537)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
..+.......+....++..... .....++++...... ......++++++++|||||||.||+|++
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~il~TSGTTG~PKgv~~ 216 (537)
T PRK13382 152 -ATVDRALADCPQATRIVAWTDE-------DHDLTVEVLIAAHAG-------QRPEPTGRKGRVILLTSGTTGTPKGARR 216 (537)
T ss_pred -HHHHHHHhhccccceEEEecCC-------cccccHHHHhhccCc-------CCCCCCCCCCeEEEECCCCCCCCCEEEe
Confidence 2222222211111111111110 012244544432211 0111245778999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
+|.++..........+.+..+++++...|++|.+++..++.++..|+++++.. ..+++.+++.|+++++|++.++|+++
T Consensus 217 s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~ 295 (537)
T PRK13382 217 SGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRR-RFDPEATLDLIDRHRATGLAVVPVMF 295 (537)
T ss_pred ccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECC-CcCHHHHHHHHHHhCCEEEEehHHHH
Confidence 99998887777777778889999999999999999877889999999988854 66789999999999999999999999
Q ss_pred HHHHccCCC--CCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 241 KAWKNTNCL--QGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 241 ~~l~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
..|++.... ...+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++.+...+........+++|+|++++
T Consensus 296 ~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~ 374 (537)
T PRK13382 296 DRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGT 374 (537)
T ss_pred HHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEecccccccCcceecChhHhccCCCCccccCcCc
Confidence 999875422 234567899999999999999999999888 56799999999998766544333334567999999999
Q ss_pred cEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCc
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADD 397 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d 397 (512)
+++|+|+++++++.|+ .|||++ ++..+.+| . ++.+.. ..++||+|||+++++++|++++.||.||
T Consensus 375 ~~~i~d~~~~~~~~g~--~GEl~v~g~~~~~gY---~-~~~~~~--------~~~g~~~TGDl~~~~~~g~l~~~GR~dd 440 (537)
T PRK13382 375 EIRILDQDFREVPTGE--VGTIFVRNDTQFDGY---T-SGSTKD--------FHDGFMASGDVGYLDENGRLFVVGRDDE 440 (537)
T ss_pred EEEEECCCCCCCCCCC--eeEEEEEcCCcccCc---c-ccchhh--------ccCCCEeeCceEEEeCCCcEEEeccccc
Confidence 9999999999999998 699999 55554433 2 222211 1246999999999999999999999999
Q ss_pred eeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcccee
Q 010344 398 TMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVS 477 (512)
Q Consensus 398 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~ 477 (512)
+||.+|++|+|.+||++|. .+|+|.+++|++.+++..+ +.+.++|++.++.. .+.+++ +++++++|+.|++|.
T Consensus 441 ~ik~~G~~v~~~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a~vv~~~~~~-~~~~~l----~~~l~~~l~~~~~P~ 513 (537)
T PRK13382 441 MIVSGGENVYPIEVEKTLA-THPDVAEAAVIGVDDEQYG-QRLAAFVVLKPGAS-ATPETL----KQHVRDNLANYKVPR 513 (537)
T ss_pred eeEECCEEECHHHHHHHHH-hCCCEeeEEEEccCccccC-CEEEEEEEECCCCC-CCHHHH----HHHHHHhccCCCCCc
Confidence 9999999999999999998 8999999999999988778 89999999876544 454444 445557888999999
Q ss_pred eEEEecCCCCCCCchHHHHHHHH
Q 010344 478 LVKIVLEFPRTASNKLLRRVLKD 500 (512)
Q Consensus 478 ~i~~~~~iP~t~~GKi~r~~l~~ 500 (512)
.+++++++|+|++||++|++|++
T Consensus 514 ~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 514 DIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEEEeccCCCCCCCCCcHHhhCC
Confidence 99999999999999999999864
No 25
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=5.7e-64 Score=524.46 Aligned_cols=475 Identities=14% Similarity=0.115 Sum_probs=357.3
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|+++..
T Consensus 88 ~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~------ 161 (666)
T PLN02614 88 IVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKK------ 161 (666)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHH------
Confidence 478999999999 9999999999999999999999999999999999999999999999999999999998742
Q ss_pred ccchhhHHhcCCC----ceEEeeccCCcccc---c--ccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCC
Q 010344 81 FPLYSKVAEAGPL----KAVVLPVIGDDVGI---Q--LRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGT 151 (512)
Q Consensus 81 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 151 (512)
...+....+. ...++......... . ......+|++++..... .. .......++|+++|+|||||
T Consensus 162 ---~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~d~a~I~yTSGT 234 (666)
T PLN02614 162 ---ISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEG--KQ--YDLPIKKKSDICTIMYTSGT 234 (666)
T ss_pred ---HHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhccc--CC--CCCCCCCCCceEEEEEcCCC
Confidence 1222221111 11111111110000 0 00112457776654322 00 11122357899999999999
Q ss_pred CCCCceEEecCchhHHHHHHhhccc-----cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHH
Q 010344 152 TGEPKAIPWTQLSPIRCAAEAWGHI-----DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQ 226 (512)
Q Consensus 152 TG~pK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~ 226 (512)
||.||||++||+++.+.+......+ ++.++|++++++|++|.+++...+..++.|+++++.+ .++..+++.|+
T Consensus 235 TG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~ 312 (666)
T PLN02614 235 TGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWR--GDVKLLIEDLG 312 (666)
T ss_pred CCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHH
Confidence 9999999999999988776554332 5678999999999999999876667788999998864 36789999999
Q ss_pred hcCceEEecchHHHHHHHccCCC-------------------------------CCC-------------Cc-CceeEEE
Q 010344 227 DSGVSVLGTVPSLVKAWKNTNCL-------------------------------QGL-------------DW-TKIRSFA 261 (512)
Q Consensus 227 ~~~~t~l~~~P~~~~~l~~~~~~-------------------------------~~~-------------~l-~~l~~i~ 261 (512)
+++||+++++|.++..+...... ... .+ +++|.++
T Consensus 313 ~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~ 392 (666)
T PLN02614 313 ELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIIL 392 (666)
T ss_pred HhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEE
Confidence 99999999999999987642100 000 01 6899999
Q ss_pred eecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeC-CC--CCCCCCCCCccc
Q 010344 262 STGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILD-EL--GVPYPDDQPCVG 338 (512)
Q Consensus 262 ~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~--~~~~~~g~~~~G 338 (512)
+||+++++.+ +.+.+.++++++++.||+||+++..+..........+++|+|+|+++++|+| ++ +++++.|+ .|
T Consensus 393 ~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~--~G 469 (666)
T PLN02614 393 SGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTP--RG 469 (666)
T ss_pred EcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCC--Cc
Confidence 9999999875 5555666568999999999997654433222223468999999999999998 33 46888888 69
Q ss_pred cccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceeee-cceecchHHHHHhhh
Q 010344 339 EVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCD 416 (512)
Q Consensus 339 el~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~-~G~~v~~~~iE~~l~ 416 (512)
||++ ++..+.+| +.+++.+...|. +|||+|||+|++|+||+|+|+||.||+||+ +|++|+|.+||++|.
T Consensus 470 El~vrGp~v~~GY--~~~pe~T~~~f~-------dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~ 540 (666)
T PLN02614 470 EICIRGKTLFSGY--YKREDLTKEVLI-------DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYG 540 (666)
T ss_pred eEEEcCCcccccc--cCCHHHhhhhhc-------cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHh
Confidence 9999 66655432 334444444331 479999999999999999999999999995 899999999999998
Q ss_pred cCCcceeeeeEEeeCCCCCCCceEEEEEEecCCC----------CC-----CcHHHHHHHHHHHH-----HhccCCccce
Q 010344 417 GADESILETAAISVSPAGGGPEVLVICVVLKKGF----------TS-----QPVDKLKMIFSKAI-----QRNLNPLFKV 476 (512)
Q Consensus 417 ~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~----------~~-----~~~~~l~~~~~~~~-----~~~l~~~~~p 476 (512)
+||.|.+++|++.... ..++|+|++..+. .. .+..++++.+.+.+ +++|+.|.++
T Consensus 541 -~~p~V~~~~V~g~~~~----~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i 615 (666)
T PLN02614 541 -EVQAVDSVWVYGNSFE----SFLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEII 615 (666)
T ss_pred -cCCCeeEEEEEecCCc----ceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCccee
Confidence 9999999999997642 5789999886421 00 11233444444443 3579999999
Q ss_pred eeEEEecC-C-----CCCCCchHHHHHHHHHHHhhhhc
Q 010344 477 SLVKIVLE-F-----PRTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 477 ~~i~~~~~-i-----P~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
+.|.++++ + .+|+++|++|+.+.+.|++++++
T Consensus 616 ~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ 653 (666)
T PLN02614 616 KAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDE 653 (666)
T ss_pred eEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHH
Confidence 99998864 2 38999999999999999988875
No 26
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=8.1e-63 Score=508.92 Aligned_cols=474 Identities=19% Similarity=0.220 Sum_probs=377.0
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++++.+.. ...
T Consensus 64 ~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~ 142 (547)
T PRK13295 64 LVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRG-FDH 142 (547)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccC-cch
Confidence 378999999999 999999999999999999999999999999999999999999999999999999999874310 001
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCC---CCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYH---PGPKYYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
...+..+....+....++.... .+..+|.+++...... ............++++++++|||||||.||+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~ 214 (547)
T PRK13295 143 AAMARRLRPELPALRHVVVVGG--------DGADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKG 214 (547)
T ss_pred HHHHHHHhhhCCCcceEEEecC--------CCccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCE
Confidence 1112222222221111111111 1123455554322110 0001111223456889999999999999999
Q ss_pred EEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 158 IPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
|+++|.++..++......+++.+++++++..|++|..++.. ++.++..|+++++.+ ..++..+++.++++++|++.++
T Consensus 215 v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~ 293 (547)
T PRK13295 215 VMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD-IWDPARAAELIRTEGVTFTMAS 293 (547)
T ss_pred EEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEec
Confidence 99999999988888777788899999999999999988754 888999999999865 5678999999999999999999
Q ss_pred hHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-CCccccccccc
Q 010344 237 PSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ-PQAFGAFSTAT 315 (512)
Q Consensus 237 P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~p~ 315 (512)
|+++..|.........+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++.+.+.+.... .....++|.|.
T Consensus 294 p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~ 372 (547)
T PRK13295 294 TPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPL 372 (547)
T ss_pred HHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CCCeEEeccCCCCCCeeeccCCCcchhccCcccccc
Confidence 9999999887655667788999999999999999999998888 789999999999987654443221 22346789999
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEec
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGR 394 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR 394 (512)
++++++|+|+++++++.|+ .|||++ ++..+.+| +.+++.+.. ..+|||+|||+|+++++|++++.||
T Consensus 373 ~~~~v~i~d~~~~~~~~g~--~Gel~v~g~~~~~gY--~~~~~~t~~--------~~~g~~~TGD~~~~~~~g~l~~~gR 440 (547)
T PRK13295 373 PGVEVRVVDADGAPLPAGQ--IGRLQVRGCSNFGGY--LKRPQLNGT--------DADGWFDTGDLARIDADGYIRISGR 440 (547)
T ss_pred CCcEEEEECCCCCCCCCCC--CCeEEEEcCcccccc--cCCcccccc--------CCCCCeecceEEEEcCCceEEEEec
Confidence 9999999999999999999 699999 44443322 222222221 1356999999999999999999999
Q ss_pred cCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcc
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLF 474 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 474 (512)
.+|+++.+|++|+|.+||++|. .++.|.+++|++.+++..+ +.++++|++.++.. .+.+++.+++++ ..+++|+
T Consensus 441 ~~~~i~~~G~~v~p~~IE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~-~~~~~l~~~~~~---~~l~~~~ 514 (547)
T PRK13295 441 SKDVIIRGGENIPVVEIEALLY-RHPAIAQVAIVAYPDERLG-ERACAFVVPRPGQS-LDFEEMVEFLKA---QKVAKQY 514 (547)
T ss_pred cCCeEEECCEEECHHHHHHHHH-hCCCeeeEEEEeeecCCCC-cEEEEEEEeCCCCC-CCHHHHHHHHHh---ccCcccc
Confidence 9999999999999999999998 8999999999999988888 89999999877644 555555555542 3799999
Q ss_pred ceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 475 KVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 475 ~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+|..|+++++||+|++||++|++|++++.+
T Consensus 515 ~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 515 IPERLVVRDALPRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred CCcEEEEeccCCCCCCccccHHHHHHHHhc
Confidence 999999999999999999999999998864
No 27
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=6.7e-63 Score=508.68 Aligned_cols=466 Identities=21% Similarity=0.244 Sum_probs=375.5
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++..+++.++++++++++...
T Consensus 59 ~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~----- 133 (537)
T PLN02246 59 LSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYV----- 133 (537)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchH-----
Confidence 368999999999 99999999999999999999999999999999999999999999999999999999987422
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
+.+..+........+.++ ... .....+.++...... ..+.....++++++++|||||||.||+|++
T Consensus 134 -~~~~~~~~~~~~~~i~~~--~~~------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~ 199 (537)
T PLN02246 134 -DKLKGLAEDDGVTVVTID--DPP------EGCLHFSELTQADEN-----ELPEVEISPDDVVALPYSSGTTGLPKGVML 199 (537)
T ss_pred -HHHHHHhhcCCceEEEeC--CCC------CCceeHHHHhcCCCC-----CCCCCCCCccCEEEEEeCCCCCCCCceEEE
Confidence 222222221111222221 110 122345555432211 112233467889999999999999999999
Q ss_pred cCchhHHHHHHhhc----cccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 161 TQLSPIRCAAEAWG----HIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 161 s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
+|+++......... .+++.++|++++.+|++|.+++.. ++.++..|+++++.+ ..++..+++.++++++|++.+
T Consensus 200 s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 278 (537)
T PLN02246 200 THKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP-KFEIGALLELIQRHKVTIAPF 278 (537)
T ss_pred eHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC-CCCHHHHHHHHHHhCceEEEc
Confidence 99999887665433 467889999999999999999855 778899999999986 467889999999999999999
Q ss_pred chHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC----CCCCccccc
Q 010344 236 VPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM----LQPQAFGAF 311 (512)
Q Consensus 236 ~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~----~~~~~~~~~ 311 (512)
+|+++..|++.......+++++|.+++||+++++++.+.+.+.+++.++++.||+||++.+++.+.. ......+++
T Consensus 279 ~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~ 358 (537)
T PLN02246 279 VPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSC 358 (537)
T ss_pred chHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCcc
Confidence 9999999988765556678899999999999999999999999888889999999999875443221 112345689
Q ss_pred ccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeE
Q 010344 312 STATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYI 389 (512)
Q Consensus 312 G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l 389 (512)
|+|+++++++|+| +++++++.|+ .|||++ ++..+.+| +.+++.+...+ +.++||+|||+|+++++|++
T Consensus 359 G~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~g~~~~~GY--~~~~~~~~~~~------~~~~~~~TGD~~~~~~~g~l 428 (537)
T PLN02246 359 GTVVRNAELKIVDPETGASLPRNQ--PGEICIRGPQIMKGY--LNDPEATANTI------DKDGWLHTGDIGYIDDDDEL 428 (537)
T ss_pred ccccCCcEEEEecCCCCCcCCCCC--ceEEEEECCchhccc--cCCchhhhhcc------cCCCCeeecceEEEeCCCeE
Confidence 9999999999999 5788999999 699999 55544432 22333333333 34579999999999999999
Q ss_pred EEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhc
Q 010344 390 IVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRN 469 (512)
Q Consensus 390 ~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~ 469 (512)
++.||.+|+|+.+|++|+|.+||+.+. .+|+|.+++|++.++...+ +.++++++..++.. .+.+++ ++++.++
T Consensus 429 ~~~GR~dd~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l----~~~l~~~ 501 (537)
T PLN02246 429 FIVDRLKELIKYKGFQVAPAELEALLI-SHPSIADAAVVPMKDEVAG-EVPVAFVVRSNGSE-ITEDEI----KQFVAKQ 501 (537)
T ss_pred EEEecccceEEECCEEECcHHHHHHHH-hCCCeeEEEEEcccCccCC-ceeEEEEEeCCCCC-CCHHHH----HHHHHhh
Confidence 999999999999999999999999998 8999999999999888877 78999998876644 555444 4555578
Q ss_pred cCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 470 LNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 470 l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
|++|+.|..|+++++||+|++||++|+.|++++.+
T Consensus 502 l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 502 VVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred CcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 89999999999999999999999999999998753
No 28
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-63 Score=510.84 Aligned_cols=476 Identities=21% Similarity=0.222 Sum_probs=372.2
Q ss_pred HHHHHHHHhc-c-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 3 YRLVANALDT-M-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 3 ~~~~a~~L~~-~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++...
T Consensus 59 ~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~----- 133 (562)
T PRK05677 59 SGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMA----- 133 (562)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchh-----
Confidence 6889999987 5 99999999999999999999999999999999999999999999999999999999986432
Q ss_pred ccchhhHHhcCCCceEEeeccCCccc-------------------ccccccCccHHHHhhccCCCCCCCCCCCCCCCCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVG-------------------IQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDS 141 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (512)
..+..+......+.+++.......+ ....++...+.+.+..... .........+++
T Consensus 134 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d 208 (562)
T PRK05677 134 -HLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLPQAVKFNDALAKGAG----QPVTEANPQADD 208 (562)
T ss_pred -hhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccCCcccccHHHHHhcCCC----CCCCCCCCCccC
Confidence 1222222211222222211100000 0000122334444433221 111122345789
Q ss_pred eEEEEecCCCCCCCceEEecCchhHHHHHHhhcccc--cc-CCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCc
Q 010344 142 VINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHID--MK-VGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPL 217 (512)
Q Consensus 142 ~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~--~~-~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~ 217 (512)
+++++|||||||.||+|+++|.++..+.......+. +. ..+.+++.+|++|.+++.. ++.++..|++.++.+...+
T Consensus 209 ~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~ 288 (562)
T PRK05677 209 VAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRD 288 (562)
T ss_pred EEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCccc
Confidence 999999999999999999999999877655444332 33 3467899999999999854 7778888988888776667
Q ss_pred hhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCcccccee
Q 010344 218 ERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSY 297 (512)
Q Consensus 218 ~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 297 (512)
+..+++.++++++|+++++|+++..++........+++++|.+++||+++++++.+.+.+.+ ++++++.||+||++++.
T Consensus 289 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~ 367 (562)
T PRK05677 289 LPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQLATAERWKEVT-GCAICEGYGMTETSPVV 367 (562)
T ss_pred HHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCHHHHHHHHHHc-CCCeeccCCccccCcce
Confidence 88999999999999999999999999876544455678999999999999999999988876 78999999999998765
Q ss_pred cccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeee
Q 010344 298 IQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRR 376 (512)
Q Consensus 298 ~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (512)
..... .....+++|.|+++++++|+|+++++++.|+ .|||++ ++....+ |+.+++.+...| ..++||+
T Consensus 368 ~~~~~-~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~~~------~~~g~~~ 436 (562)
T PRK05677 368 SVNPS-QAIQVGTIGIPVPSTLCKVIDDDGNELPLGE--VGELCVKGPQVMKG--YWQRPEATDEIL------DSDGWLK 436 (562)
T ss_pred eecCc-cCCCCCccCccCCCCEEEEECCCCCCCCCCC--CeEEEEecCccchh--hcCCchhhhhcc------CCCCccc
Confidence 54332 2334578999999999999999999999999 699999 5544432 223444444444 2457999
Q ss_pred ecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHH
Q 010344 377 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVD 456 (512)
Q Consensus 377 TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~ 456 (512)
|||+|+++++|++++.||.+|+|+++|++|+|.+||+.|. .+|+|.+++|++++++..+ +.++++++++++.. .+.+
T Consensus 437 TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~-~~~~v~~~~v~g~~~~~~g-~~~~~~v~~~~~~~-~~~~ 513 (562)
T PRK05677 437 TGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLA-ALPGVLQCAAIGVPDEKSG-EAIKVFVVVKPGET-LTKE 513 (562)
T ss_pred ccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHH-hCCCccEEEEEeccCccCC-ceEEEEEEeCCCCC-CCHH
Confidence 9999999999999999999999999999999999999998 8999999999999988878 88999998876544 5666
Q ss_pred HHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhh
Q 010344 457 KLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELS 507 (512)
Q Consensus 457 ~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 507 (512)
++.++++ ++|++|++|..|+++++||+|++||++|++|++++.++..
T Consensus 514 ~l~~~~~----~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~~~ 560 (562)
T PRK05677 514 QVMEHMR----ANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELKKAG 560 (562)
T ss_pred HHHHHHH----HhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHHhcc
Confidence 6655554 6778899999999999999999999999999998776553
No 29
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-62 Score=503.73 Aligned_cols=471 Identities=18% Similarity=0.197 Sum_probs=370.7
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|++|.++.+++..+++.+++++++++..+.
T Consensus 48 ~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~----- 122 (539)
T PRK07008 48 RAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFL----- 122 (539)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987532
Q ss_pred ccchhhHHhcCCCc-eEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 81 FPLYSKVAEAGPLK-AVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
+.+..+....... .++........... .....+|+++...... ........++++++++|||||||.||+|+
T Consensus 123 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~ 195 (539)
T PRK07008 123 -PLVDALAPQCPNVKGWVAMTDAAHLPAG-STPLLCYETLVGAQDG-----DYDWPRFDENQASSLCYTSGTTGNPKGAL 195 (539)
T ss_pred -HHHHHHHhhCCCceEEEEEccCCccccC-CcccccHHHHhcccCC-----CcCcccCCcccceEEEECCCCCCCCcEEE
Confidence 2222222222221 11111111111110 1224566666543221 11122345678999999999999999999
Q ss_pred ecCchhHHHHH--HhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 160 WTQLSPIRCAA--EAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 160 ~s~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
+||.++..+.. .....+++.++|++++..|++|..++...+.++..|+++++.+...++..+++.++++++|++.++|
T Consensus 196 ~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P 275 (539)
T PRK07008 196 YSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVP 275 (539)
T ss_pred EecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEech
Confidence 99999865432 3334677889999999999999888766788899999999976667889999999999999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC----------CCc
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ----------PQA 307 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~----------~~~ 307 (512)
+++..+++.......+++++|.++++|+++++++.+.+.+.+ +.++++.||+||++...+.+.... ...
T Consensus 276 ~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (539)
T PRK07008 276 TVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKL 354 (539)
T ss_pred HHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCceecccccccccccceecccccccccCCchhhhhh
Confidence 999999887666667788999999999999999999998887 789999999999986544332110 012
Q ss_pred ccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCC
Q 010344 308 FGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVG 386 (512)
Q Consensus 308 ~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 386 (512)
..++|.|+++++++|+|+++++++.+....|||++ ++....+ |.+... .+. .++||+|||+|++++|
T Consensus 355 ~~~~G~p~pg~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~g---y~~~~~-------~~~--~~g~~~TGD~~~~~~d 422 (539)
T PRK07008 355 LEKQGRVIYGVDMKIVGDDGRELPWDGKAFGDLQVRGPWVIDR---YFRGDA-------SPL--VDGWFPTGDVATIDAD 422 (539)
T ss_pred cccCCccccceEEEEECCCCCccCCCCCcceEEEEeCCccchh---hcCChh-------hhh--cCCCcccCceEEEcCC
Confidence 35789999999999999999888765322699999 4443322 112110 111 2469999999999999
Q ss_pred CeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHH
Q 010344 387 GYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAI 466 (512)
Q Consensus 387 g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~ 466 (512)
|++++.||.+|+|+.+|.+|+|.+||+.+. .+|.|.++++++.++...+ +.++++|+..++.. .+.+++.+++
T Consensus 423 g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~~---- 495 (539)
T PRK07008 423 GFMQITDRSKDVIKSGGEWISSIDIENVAV-AHPAVAEAACIACAHPKWD-ERPLLVVVKRPGAE-VTREELLAFY---- 495 (539)
T ss_pred CcEEEeecccCEEEeCCeEEcHHHHHHHHH-hCCceeEEEEEecCCchhc-cceEEEEEeCCCCc-cCHHHHHHHH----
Confidence 999999999999999999999999999998 8999999999999988777 78888888776544 5555555555
Q ss_pred HhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 467 QRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 467 ~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+++|++|+.|..|+++++||+|++||++|++|++++.+
T Consensus 496 ~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~ 533 (539)
T PRK07008 496 EGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRD 533 (539)
T ss_pred HhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHh
Confidence 46788999999999999999999999999999998875
No 30
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.4e-64 Score=448.39 Aligned_cols=473 Identities=19% Similarity=0.229 Sum_probs=401.0
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|.+|.+. |++||+|.+.++|..+|++++||++++|+.+|.-=|.....|+.+..+.++++.+|.+... ..+..
T Consensus 62 r~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~-~gFd~ 140 (542)
T COG1021 62 RADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQH-SGFDY 140 (542)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhh-cccCc
Confidence 378999999999 9999999999999999999999999999999998899999999999999999999998753 45566
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.+....++..++....++...... .....+..+..... ...+..+.+++++++++.+.||||.||.+..
T Consensus 141 ~~~ar~~~a~~~tlr~v~v~ge~~-------~~~~~~~~~~~~a~----~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPR 209 (542)
T COG1021 141 RPFARELVAKHPTLRHVIVAGEAE-------HPSVLEAALCHPAG----LFTPAPPADAGEVAFFQLSGGTTGTPKLIPR 209 (542)
T ss_pred HHHHHHHHhhCCcceEEEEccCCC-------CcchhhhhhhCccc----cCCcCCCCCCCceEEEEecCCCCCCCccccc
Confidence 667777777777654444332111 01112222222211 1222344567889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH--HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII--LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
||..+..+++...+..+++..+++++.+|..|.+.+.. .++.++.|+++++.+ +.+++..+.+|+++++|+..++|.
T Consensus 210 tH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~-~psp~~~F~lIerh~Vt~tALVPp 288 (542)
T COG1021 210 THNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAP-DPSPELCFPLIERHGVTVTALVPP 288 (542)
T ss_pred cccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECC-CCCHHHHHHHHHHhccceEEeccH
Confidence 99999999988888889999999999999999998864 999999999999965 788899999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCccccccccc-CC
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTAT-MT 317 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~-~~ 317 (512)
+...|++..+....+++|||.+-+||+.+++...+.+...+ ++.+-+.|||+|.-.-++-.......-..+-|+|+ |.
T Consensus 289 la~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~ 367 (542)
T COG1021 289 LASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPD 367 (542)
T ss_pred HHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHHHHhhhhhhhhcccccCCchHheeecCCCcCCCc
Confidence 99999999888899999999999999999999999999888 89999999999965544433333344567889997 67
Q ss_pred ccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccC
Q 010344 318 TGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD 396 (512)
Q Consensus 318 ~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~ 396 (512)
-+++|+|++|+++++|+ +|++.. +|..+++| |..++.+...| +.+|+|+|||+.+.|+||++.+.||.|
T Consensus 368 DEvrvvD~dg~pv~pGE--~G~LltRGPYTirGY--yrap~HNa~aF------~a~GFYrsGD~V~~~~dGyl~V~GR~K 437 (542)
T COG1021 368 DEVRVVDADGNPVAPGE--VGELLTRGPYTIRGY--YRAPEHNARAF------DADGFYRSGDLVRRDPDGYLVVEGRVK 437 (542)
T ss_pred ceeEEecCCCCCCCCCC--cceeeecCCeeeeee--ccCchhhhhcc------CcCCceecCceeEecCCceEEEEeeeh
Confidence 89999999999999999 799999 56555543 23344444444 678899999999999999999999999
Q ss_pred ceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce
Q 010344 397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV 476 (512)
Q Consensus 397 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 476 (512)
|+|+.+|++|-.+|||+.|. .||.|.+++++..+|+-.| |+.+|||+.++.. .+..+|+.++++ ..++.|++|
T Consensus 438 DQINRgGEKIAAeEvEn~LL-~HP~V~~AAlVampDelLG-EksCAfiv~~~~~--~~~~qlr~~L~~---~GlAa~K~P 510 (542)
T COG1021 438 DQINRGGEKIAAEEVENLLL-RHPAVHDAALVAMPDELLG-EKSCAFIVVKEPP--LRAAQLRRFLRE---RGLAAFKLP 510 (542)
T ss_pred hhhccccchhhHHHHHHHHh-hCchhhhhhhhcCchhhcC-cceeEEEEecCCC--CCHHHHHHHHHH---cchhhhcCC
Confidence 99999999999999999999 9999999999999999999 9999999998764 677788888874 688999999
Q ss_pred eeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 477 SLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 477 ~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
..|++++.+|.|+-||||++.|++++...
T Consensus 511 Drie~v~~~P~T~VGKIdKk~Lr~~l~~~ 539 (542)
T COG1021 511 DRIEFVDSLPLTAVGKIDKKALRRRLASR 539 (542)
T ss_pred cceeecccCCCcccccccHHHHHHHhhhh
Confidence 99999999999999999999999988754
No 31
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-62 Score=504.82 Aligned_cols=475 Identities=20% Similarity=0.220 Sum_probs=377.5
Q ss_pred HHHHHHHHhcc--CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 3 YRLVANALDTM--FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 3 ~~~~a~~L~~~--i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++++++...
T Consensus 45 v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~----- 119 (546)
T PRK08314 45 AERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELA----- 119 (546)
T ss_pred HHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchh-----
Confidence 67899999886 99999999999999999999999999999999999999999999999999999999987532
Q ss_pred ccchhhHHhcCCCceEEeeccCCccc------------------ccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVG------------------IQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSV 142 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (512)
+.+............++........ .....+...|++....... .......++++
T Consensus 120 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 192 (546)
T PRK08314 120 -PKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAPGGVVAWKEALAAGLA------PPPHTAGPDDL 192 (546)
T ss_pred -hhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccccccccccHHHHhcccCC------CCCCCCCCCCe
Confidence 2222222221111111110000000 0001123356655533211 12233467899
Q ss_pred EEEEecCCCCCCCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhH
Q 010344 143 INILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSF 221 (512)
Q Consensus 143 ~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~ 221 (512)
++++|||||||.||+|+++|.++..++......+++..+|++++.+|++|.+++.. ++.++..|+++++.+ ..++..+
T Consensus 193 a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~ 271 (546)
T PRK08314 193 AVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP-RWDREAA 271 (546)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC-CCCHHHH
Confidence 99999999999999999999999998887777788899999999999999999855 789999999999986 4577899
Q ss_pred HHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccC
Q 010344 222 GKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGS 301 (512)
Q Consensus 222 ~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 301 (512)
++.++++++|++.++|+++..++........+++++|.+++||+++++++.+++.+.+ +.++++.||+||++.......
T Consensus 272 ~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~ 350 (546)
T PRK08314 272 ARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAVAERLKELT-GLDYVEGYGLTETMAQTHSNP 350 (546)
T ss_pred HHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHHHHHHHHHHc-CCcEEecccccccccceecCC
Confidence 9999999999999999999999876555566788999999999999999999999887 688999999999987654433
Q ss_pred CCCCCcccccccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecc
Q 010344 302 MLQPQAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGD 379 (512)
Q Consensus 302 ~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD 379 (512)
.. ....+++|.|+++++++|+| +++.+++.|+ .|||++ ++..+.+| +.+++.+...|.. .++.+||+|||
T Consensus 351 ~~-~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~--~Gel~v~g~~~~~gY--~~~~~~t~~~f~~---~~~~~~~~TGD 422 (546)
T PRK08314 351 PD-RPKLQCLGIPTFGVDARVIDPETLEELPPGE--VGEIVVHGPQVFKGY--WNRPEATAEAFIE---IDGKRFFRTGD 422 (546)
T ss_pred Cc-CCCCCccCcccCCeEEEEEeCCCCcCCCCCC--ceEEEEECCchhccc--cCChhHhhhhhhh---cCCCceEecCC
Confidence 22 23457899999999999999 5689999998 699999 54444332 2233333333322 14557999999
Q ss_pred eEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCC-CCcHHHH
Q 010344 380 IIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFT-SQPVDKL 458 (512)
Q Consensus 380 ~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~-~~~~~~l 458 (512)
+|+++++|++++.||.||+++++|++|+|.+||++|. ++|+|.+++|++.++...+ +.++++++++++.. ..+.+++
T Consensus 423 l~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~-~~~~v~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~l 500 (546)
T PRK08314 423 LGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLY-KHPAIQEACVIATPDPRRG-ETVKAVVVLRPEARGKTTEEEI 500 (546)
T ss_pred EEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHH-hCcchheEEEEeCCCcccC-ceeEEEEEECCCCCCCCCHHHH
Confidence 9999999999999999999999999999999999998 8999999999999988877 88999999887542 1333444
Q ss_pred HHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 459 KMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 459 ~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
+++++++|++|++|..|+++++||+|.+||++|+.|++..+..
T Consensus 501 ----~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~~ 543 (546)
T PRK08314 501 ----IAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKAR 543 (546)
T ss_pred ----HHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHhhh
Confidence 4555578889999999999999999999999999998766543
No 32
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.5e-62 Score=514.22 Aligned_cols=477 Identities=17% Similarity=0.118 Sum_probs=353.7
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|+++...
T Consensus 86 ~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~----- 160 (660)
T PLN02861 86 AAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI----- 160 (660)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999986421
Q ss_pred ccchhhHHhcCC-CceEEeeccCCcccc-----cccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 81 FPLYSKVAEAGP-LKAVVLPVIGDDVGI-----QLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
+.+.......+ ....++......... .......+|.++...... . .......++|+++|+|||||||.
T Consensus 161 -~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~dd~a~i~yTSGTTG~ 234 (660)
T PLN02861 161 -SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSL---D--CELPPKQKTDICTIMYTSGTTGE 234 (660)
T ss_pred -HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcc---c--CCCCccCCCceEEEEecCCCCCC
Confidence 12222222221 111122111110000 000122457776654322 1 11123457899999999999999
Q ss_pred CceEEecCchhHHHHHHhhcccc-----ccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcC
Q 010344 155 PKAIPWTQLSPIRCAAEAWGHID-----MKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSG 229 (512)
Q Consensus 155 pK~v~~s~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~ 229 (512)
||||++||+++++.+......++ +.++|++++++|++|.+++...+.+++.|+++++.. .++..+++.|++++
T Consensus 235 PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~ 312 (660)
T PLN02861 235 PKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQ--GDIRYLMEDVQALK 312 (660)
T ss_pred CCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhC
Confidence 99999999999887766544433 467899999999999999876666899999998864 36789999999999
Q ss_pred ceEEecchHHHHHHHccC-------------------------------------CCCCC-------Cc-CceeEEEeec
Q 010344 230 VSVLGTVPSLVKAWKNTN-------------------------------------CLQGL-------DW-TKIRSFASTG 264 (512)
Q Consensus 230 ~t~l~~~P~~~~~l~~~~-------------------------------------~~~~~-------~l-~~l~~i~~~G 264 (512)
||+++++|.++..|.... ..... .+ +++|.+++||
T Consensus 313 ~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Gg 392 (660)
T PLN02861 313 PTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGA 392 (660)
T ss_pred CcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECC
Confidence 999999999999886410 00000 11 5799999999
Q ss_pred CCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeC--CCC-CCCCCCCCcccccc
Q 010344 265 ETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILD--ELG-VPYPDDQPCVGEVG 341 (512)
Q Consensus 265 ~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d--~~~-~~~~~g~~~~Gel~ 341 (512)
+++++++.+ +.+.++..++++.||+||+++..+..........+++|+|+++++++|+| ++| ..++.++ .|||+
T Consensus 393 apl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~--~GEi~ 469 (660)
T PLN02861 393 APLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVP--RGEIC 469 (660)
T ss_pred CCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCCCC--ceeEE
Confidence 999999755 55556445799999999997654433222223468999999999999997 334 3344454 59999
Q ss_pred c-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceeee-cceecchHHHHHhhhcCC
Q 010344 342 L-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDGAD 419 (512)
Q Consensus 342 v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~-~G~~v~~~~iE~~l~~~~ 419 (512)
+ ++.++.+| +.+++.+...|. +|||+|||+|++|+||+++|+||+||+||+ +|++|+|.+||++|. .|
T Consensus 470 vrGp~v~~GY--~~~pe~T~~~f~-------dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~-~~ 539 (660)
T PLN02861 470 LRGNTLFSGY--HKRQDLTEEVLI-------DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYS-RC 539 (660)
T ss_pred EcCCcccccc--cCCHHHHHhhhh-------ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHh-cC
Confidence 9 56555432 334444444341 479999999999999999999999999996 899999999999998 89
Q ss_pred cceeeeeEEeeCCCCCCCceEEEEEEecCCC--------C-CCcHH------HHHHHHHHHHHh-----ccCCccceeeE
Q 010344 420 ESILETAAISVSPAGGGPEVLVICVVLKKGF--------T-SQPVD------KLKMIFSKAIQR-----NLNPLFKVSLV 479 (512)
Q Consensus 420 ~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~--------~-~~~~~------~l~~~~~~~~~~-----~l~~~~~p~~i 479 (512)
|.|.+++|++.+. + +.++|+|++..+. . ..+.. +....+.+.+++ .+..|.+++.|
T Consensus 540 p~V~~a~V~G~~~---~-~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~ 615 (660)
T PLN02861 540 PLIASIWVYGNSF---E-SFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAI 615 (660)
T ss_pred CCeeEEEEEecCC---c-ceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEE
Confidence 9999999999763 3 6899999986320 0 01111 233334444432 58899999999
Q ss_pred EEec-CC-----CCCCCchHHHHHHHHHHHhhhhc
Q 010344 480 KIVL-EF-----PRTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 480 ~~~~-~i-----P~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
.+.+ ++ ++|+++|+.|+.+.+.|++++++
T Consensus 616 ~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~ 650 (660)
T PLN02861 616 HLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQ 650 (660)
T ss_pred EEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHH
Confidence 8865 45 79999999999999999998875
No 33
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.1e-62 Score=495.41 Aligned_cols=448 Identities=20% Similarity=0.213 Sum_probs=360.4
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
.++++|++|.+...+||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++.+++++++++.....
T Consensus 35 ~~~~~a~~L~~~~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~----- 109 (487)
T PRK07638 35 SVCKVANWLNEKESKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLN----- 109 (487)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEeccccc-----
Confidence 368899999888448999999999999999999999999999999999999999999999999999999974321
Q ss_pred cchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWT 161 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s 161 (512)
.+. .. .. .++.. ..+.+....... .........+++++++|||||||.||+|+++
T Consensus 110 -~~~---~~-~~--~~~~~-------------~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s 164 (487)
T PRK07638 110 -DLP---DE-EG--RVIEI-------------DEWKRMIEKYLP-----TYAPIENVQNAPFYMGFTSGSTGKPKAFLRA 164 (487)
T ss_pred -chh---hc-cc--eEEEe-------------hhhhhhhhhccc-----cccccccCCCCcEEEEeCCCCCCCCcEEEEe
Confidence 111 00 01 11110 012221111110 1111122346789999999999999999999
Q ss_pred CchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHHH
Q 010344 162 QLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVK 241 (512)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~ 241 (512)
|.++..++......+++.++|+++...|++|..++..++.+++.|+++++.+ ..++..+++.++++++|++.++|+++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 243 (487)
T PRK07638 165 QQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMR-KFIPNQVLDKLETENISVMYTVPTMLE 243 (487)
T ss_pred cHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcC-CCCHHHHHHHHHHcCCeEEEeCcHHHH
Confidence 9999988887777788999999999999999988777888999999999875 577899999999999999999999999
Q ss_pred HHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEE
Q 010344 242 AWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFV 321 (512)
Q Consensus 242 ~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 321 (512)
.|.+... . ..+.+.++++|+.++.++.+.+.+.+++.++++.||+||++.+............+++|.|++++.++
T Consensus 244 ~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 319 (487)
T PRK07638 244 SLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVR 319 (487)
T ss_pred HHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEE
Confidence 9987632 2 34556678889999999999999998889999999999999876554433344567899999999999
Q ss_pred EeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceee
Q 010344 322 ILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMN 400 (512)
Q Consensus 322 i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~ 400 (512)
|+|++|.+++.|+ .|||++ ++..+.+| +.+++.+.. ...++||+|||+|++|++|+++++||.+|+|+
T Consensus 320 i~d~~g~~~~~g~--~Gel~v~~~~~~~gy--~~~~~~~~~-------~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~ 388 (487)
T PRK07638 320 ICNEAGEEVQKGE--IGTVYVKSPQFFMGY--IIGGVLARE-------LNADGWMTVRDVGYEDEEGFIYIVGREKNMIL 388 (487)
T ss_pred EECCCCCCCCCCC--CeEEEEecccceeee--cCCHHHHhh-------hccCCcEecCccEeEcCCCeEEEEecCCCeEE
Confidence 9999999999999 699999 44333321 112211111 23457999999999999999999999999999
Q ss_pred ecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEE
Q 010344 401 LGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVK 480 (512)
Q Consensus 401 ~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~ 480 (512)
++|++|+|.+||+++. ++|+|.+++|++.+++..+ +.+.++++.. .+.+++.+++ .+++++|++|..|+
T Consensus 389 ~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~-----~~~~~l~~~~----~~~l~~~~~p~~i~ 457 (487)
T PRK07638 389 FGGINIFPEEIESVLH-EHPAVDEIVVIGVPDSYWG-EKPVAIIKGS-----ATKQQLKSFC----LQRLSSFKIPKEWH 457 (487)
T ss_pred eCCEEECHHHHHHHHH-hCCCeeeEEEEecCchhcC-CeeEEEEECC-----CCHHHHHHHH----HHHhhcccCCcEEE
Confidence 9999999999999998 8999999999999988777 7888888641 4445555555 46777899999999
Q ss_pred EecCCCCCCCchHHHHHHHHHHHhhh
Q 010344 481 IVLEFPRTASNKLLRRVLKDQLKHEL 506 (512)
Q Consensus 481 ~~~~iP~t~~GKi~r~~l~~~~~~~~ 506 (512)
++++||+|++||++|++|++++.+..
T Consensus 458 ~v~~iP~t~~GKv~r~~L~~~~~~~~ 483 (487)
T PRK07638 458 FVDEIPYTNSGKIARMEAKSWIENQE 483 (487)
T ss_pred EecccCCCCcccccHHHHHHHHhccc
Confidence 99999999999999999999987653
No 34
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=4.9e-62 Score=504.20 Aligned_cols=471 Identities=16% Similarity=0.147 Sum_probs=363.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++..
T Consensus 50 ~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~------ 123 (552)
T PRK09274 50 RSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKA------ 123 (552)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHH------
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999987521
Q ss_pred ccchhhHHhcC-CCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 81 FPLYSKVAEAG-PLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
.....+.... .....++..... .......+.++...... .........++++++++|||||||.||+|+
T Consensus 124 -~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~ 193 (552)
T PRK09274 124 -HLARRLFGWGKPSVRRLVTVGGR-----LLWGGTTLATLLRDGAA----APFPMADLAPDDMAAILFTSGSTGTPKGVV 193 (552)
T ss_pred -HHHHHHhccCccchhheeccccc-----cccCCccHHHhcccCcc----ccCCCCCCCCCCeEEEEECCCCCCCCceEE
Confidence 0011111110 001111111000 00122345554422111 111223345688999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC------CCchhhHHHHHHhcCceEE
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG------SPLERSFGKFVQDSGVSVL 233 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~------~~~~~~~~~~l~~~~~t~l 233 (512)
+||+++...+......+++.++++.++..|++|.++ +..|+++++.+. ..++..+++.|+++++|++
T Consensus 194 ~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~ 266 (552)
T PRK09274 194 YTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFG-------PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNL 266 (552)
T ss_pred ecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhh-------hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEE
Confidence 999999988888777788999999999999876544 345777777542 2457899999999999999
Q ss_pred ecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhC-CCCeeeecCCccccceecccCCC---------
Q 010344 234 GTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAY-YKPIIECCGGTELASSYIQGSML--------- 303 (512)
Q Consensus 234 ~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~--------- 303 (512)
+++|+++..|++.......+++++|.+++||+++++++.+.+++.++ ++++++.||+||++++.+.....
T Consensus 267 ~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~ 346 (552)
T PRK09274 267 FGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAAT 346 (552)
T ss_pred eccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccc
Confidence 99999999998876555678899999999999999999999999886 37899999999998754432211
Q ss_pred CCCcccccccccCCccEEEeCC---------CCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCce
Q 010344 304 QPQAFGAFSTATMTTGFVILDE---------LGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMH 373 (512)
Q Consensus 304 ~~~~~~~~G~p~~~~~~~i~d~---------~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (512)
......++|+|+++++++|+|+ ++++++.|+ .|||++ ++..+.+ |+.+++.+...+..+ .++..
T Consensus 347 ~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~--~Gel~v~g~~~~~G--Y~~~~~~t~~~~~~~--~~g~~ 420 (552)
T PRK09274 347 DNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGE--IGEIVVAGPMVTRS--YYNRPEATRLAKIPD--GQGDV 420 (552)
T ss_pred cCCCCcccCccCCCceEEEEeccccccccccccccCCCCC--eeEEEEecCccccc--ccCChHHhhhhhccc--CCCCc
Confidence 1112347899999999999984 467889998 699999 5544433 222333333222111 12224
Q ss_pred eeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCC
Q 010344 374 LRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQ 453 (512)
Q Consensus 374 ~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~ 453 (512)
||+|||+|++|+||+++++||.||+|+++|.+|+|.+||++|. +||+|.+++|++.+++ .+ +.++++|++.++.. .
T Consensus 421 w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~v~~~~~~-~~-~~~~~~v~~~~~~~-~ 496 (552)
T PRK09274 421 WHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFN-THPGVKRSALVGVGVP-GA-QRPVLCVELEPGVA-C 496 (552)
T ss_pred EEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHH-hCcccceeEEEEeCCC-CC-ceEEEEEEccCccc-c
Confidence 9999999999999999999999999999999999999999998 8999999999999875 34 68899999887765 5
Q ss_pred cHHHHHHHHHHHHHhccCCccceeeEEEecCCCCC--CCchHHHHHHHHHHHhhh
Q 010344 454 PVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRT--ASNKLLRRVLKDQLKHEL 506 (512)
Q Consensus 454 ~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t--~~GKi~r~~l~~~~~~~~ 506 (512)
+.+++.+.+++.+... ..++.|..++++++||+| ++||++|++|++++.+.+
T Consensus 497 ~~~~l~~~l~~~l~~~-~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 497 SKSALYQELRALAAAH-PHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred chHHHhhhhHHHHHhc-CCCcceeEEeccCCCCccccccccccHHHHHHHHHHhh
Confidence 6667888888877543 456788999999999999 799999999999988765
No 35
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-62 Score=500.68 Aligned_cols=466 Identities=15% Similarity=0.193 Sum_probs=360.0
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++++++......
T Consensus 50 ~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~-- 127 (540)
T PRK05857 50 EVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMAS-- 127 (540)
T ss_pred HHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcc--
Confidence 378999999999 99999999999999999999999999999999999999999999999999999999997532111
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
..+..... ....+.++.... .. . +.+.... ...........+++++++|||||||.||+|++
T Consensus 128 -~~~~~~~~--~~~~~~~~~~~~-------~~-~-~~~~~~~------~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~ 189 (540)
T PRK05857 128 -SAVPEALH--SIPVIAVDIAAV-------TR-E-SEHSLDA------ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLL 189 (540)
T ss_pred -cccccccc--ccceeEeecccc-------cc-c-ccccccc------cccccccCCCCCCeEEEEeCCCCCCCCCeEEE
Confidence 11111110 011111111000 00 0 0000000 00011123456789999999999999999999
Q ss_pred cCchhHHHHHHhh----ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 161 TQLSPIRCAAEAW----GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 161 s~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
+|+++.++..... ..+.+..+++.++..|++|..+++..+.+++.|+++++. ..++..+++.|+++++|+++++
T Consensus 190 sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~~--~~~~~~~~~~i~~~~it~~~~~ 267 (540)
T PRK05857 190 ANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVTG--GENTTSLLEILTTNAVATTCLV 267 (540)
T ss_pred echhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHhhcceeEEec--CCChhHHHHHHHhcCcceEEeC
Confidence 9999877654322 234566788999999999999998888899999988763 3467889999999999999999
Q ss_pred hHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC----CCcccccc
Q 010344 237 PSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ----PQAFGAFS 312 (512)
Q Consensus 237 P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~----~~~~~~~G 312 (512)
|+++..|++.......+++++|.+++||++++....+++ +.+ +.++++.||+||++.......... ....+++|
T Consensus 268 P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~-~~~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G 345 (540)
T PRK05857 268 PTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFI-EAT-GVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVG 345 (540)
T ss_pred hHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHH-HHh-CCeeecccCCCcCCceeeecccccccccccccCCcC
Confidence 999999987765556778999999999999988777644 455 789999999999986543332211 12357899
Q ss_pred cccCCccEEEeCCCCCC-C-----CCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeC
Q 010344 313 TATMTTGFVILDELGVP-Y-----PDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTV 385 (512)
Q Consensus 313 ~p~~~~~~~i~d~~~~~-~-----~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~ 385 (512)
+|++|++++|+|+++.. + +.|+ .|||++ ++..+.+ ++.+++.+...| .++||+|||+|++|+
T Consensus 346 ~~~~g~~v~i~d~~~~~~~~~~~~~~~~--~Gel~v~g~~~~~G--Y~~~~~~t~~~~-------~~g~~~TGDlg~~d~ 414 (540)
T PRK05857 346 RPYPGVDVYLAATDGIGPTAPGAGPSAS--FGTLWIKSPANMLG--YWNNPERTAEVL-------IDGWVNTGDLLERRE 414 (540)
T ss_pred cccCCcEEEEECccccCccccccCCCCC--cceEEEeCcchhhh--hhCCccchhhhc-------CCCceeccceEEEcC
Confidence 99999999999977652 3 3456 699999 5444332 222333333333 146999999999999
Q ss_pred CCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHH
Q 010344 386 GGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKA 465 (512)
Q Consensus 386 ~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~ 465 (512)
+|++++.||.+|+||++|++|+|.+||++|. .||.|.+++|++.++...+ +.+.++++..+.......+++.+.+.++
T Consensus 415 ~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~V~~~~v~~~~~~~~~-~~~~~~vv~~~~~~~~~~~~l~~~~~~~ 492 (540)
T PRK05857 415 DGFFYIKGRSSEMIICGGVNIAPDEVDRIAE-GVSGVREAACYEIPDEEFG-ALVGLAVVASAELDESAARALKHTIAAR 492 (540)
T ss_pred CceEEEeccccccEecCCEEECHHHHHHHHH-hCCCeeEEEEEecCccccc-cceEEEEEeCCCCChhhHHHHHHHHHHH
Confidence 9999999999999999999999999999998 8999999999999987777 7788888876543212346788888888
Q ss_pred HHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 466 IQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 466 ~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+++++++|++|..|.++++||+|++||++|+.|++++..
T Consensus 493 ~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 493 FRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATA 531 (540)
T ss_pred HHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhh
Confidence 888999999999999999999999999999999998874
No 36
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-61 Score=496.87 Aligned_cols=468 Identities=24% Similarity=0.264 Sum_probs=378.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.+.++|+.|.+. +++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++++++...
T Consensus 39 ~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~----- 113 (513)
T PRK07656 39 RVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFL----- 113 (513)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhH-----
Confidence 367899999999 99999999999999999999999999999999999999999999999999999999987532
Q ss_pred ccchhhHHhcCCC-ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 81 FPLYSKVAEAGPL-KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
..........+. ..+++...... ........+|+++...... ........++++++++|||||||.||+|.
T Consensus 114 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~ 185 (513)
T PRK07656 114 -GVDYSATTRLPALEHVVICETEED--DPHTEKMKTFTDFLAAGDP-----AERAPEVDPDDVADILFTSGTTGRPKGAM 185 (513)
T ss_pred -HHHHHHHhccCCccEEEEEcCccc--ccCccccccHHHHHhcCCC-----CCCcCCCCCCceEEEEeCCCCCCCCCEEE
Confidence 222222222222 12222111111 0011123467777653322 11223456788999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
++|.++...+......+++.+++++++..|++|.+++.. ++.++..|+++++.+ ..+++.+++.++++++|++.++|+
T Consensus 186 ~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~ 264 (513)
T PRK07656 186 LTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLP-VFDPDEVFRLIETERITVLPGPPT 264 (513)
T ss_pred EecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecC-cCCHHHHHHHHHHhCCeEEechHH
Confidence 999999988888777888999999999999999999865 889999999998864 567899999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCc--ccccccccC
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQA--FGAFSTATM 316 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~--~~~~G~p~~ 316 (512)
++..|++.......+++++|.+++||+++++++.+.+.+.++..++++.||+||++++...+....... .+++|.|++
T Consensus 265 ~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~ 344 (513)
T PRK07656 265 MYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIA 344 (513)
T ss_pred HHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCC
Confidence 999999887666667889999999999999999999998884338999999999987766554433222 678999999
Q ss_pred CccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEecc
Q 010344 317 TTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRA 395 (512)
Q Consensus 317 ~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~ 395 (512)
+++++|+|+++++++.|+ .|||++ ++....+| +.++..+...+ .+++||+|||+|+++++|+++++||.
T Consensus 345 ~~~~~i~d~~~~~~~~g~--~Gel~v~~~~~~~gy--~~~~~~~~~~~------~~~~~~~tGDl~~~~~~g~~~~~GR~ 414 (513)
T PRK07656 345 GVENKIVNELGEEVPVGE--VGELLVRGPNVMKGY--YDDPEATAAAI------DADGWLHTGDLGRLDEEGYLYIVDRK 414 (513)
T ss_pred CcEEEEECCCCCCCCCCC--ceEEEEEcchhhhhh--cCCHHHHhhhh------ccCCceeccceEEEcCCeeEEEEecc
Confidence 999999999999999999 699999 44433322 11222222222 34679999999999999999999999
Q ss_pred CceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccc
Q 010344 396 DDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFK 475 (512)
Q Consensus 396 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 475 (512)
+|+++++|.+++|.+||+.|. .+++|.+++|++.++...+ +.+.++|+.+++.. .+.+++.+++ +++|+++++
T Consensus 415 ~d~i~~~G~~v~~~~iE~~l~-~~~~i~~~~v~~~~~~~~g-~~~~~~v~~~~~~~-~~~~~l~~~~----~~~l~~~~~ 487 (513)
T PRK07656 415 KDMFIVGGFNVYPAEVEEVLY-EHPAVAEAAVIGVPDERLG-EVGKAYVVLKPGAE-LTEEELIAYC----REHLAKYKV 487 (513)
T ss_pred cceEEeCCEEeCHHHHHHHHH-hCCCeeEEEEEecCCcccC-ceEEEEEEECCCCC-CCHHHHHHHH----HhhcccccC
Confidence 999999999999999999998 8999999999999888777 78899999876443 5655555554 567889999
Q ss_pred eeeEEEecCCCCCCCchHHHHHHHH
Q 010344 476 VSLVKIVLEFPRTASNKLLRRVLKD 500 (512)
Q Consensus 476 p~~i~~~~~iP~t~~GKi~r~~l~~ 500 (512)
|..++++++||+|++||++|++|++
T Consensus 488 p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 488 PRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred CCEEEEecCCCCCCccceeHHHHhc
Confidence 9999999999999999999999975
No 37
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2e-61 Score=496.27 Aligned_cols=472 Identities=20% Similarity=0.215 Sum_probs=375.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++.++++++++++...
T Consensus 34 ~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~----- 108 (515)
T TIGR03098 34 RVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERL----- 108 (515)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchh-----
Confidence 368999999999 99999999999999999999999999999999999999999999999999999999987421
Q ss_pred ccchhhHHhcCCC--ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVAEAGPL--KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
+.+.......+. ..+.+.... ...........|+++...... ........+++++++|||||||.||+|
T Consensus 109 -~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGTTG~PK~v 179 (515)
T TIGR03098 109 -DLLHPALPGCHDLRTLILVGEPA--HASEGGGESPSWPKLLALGDA------DPPHPVIDSDMAAILYTSGSTGRPKGV 179 (515)
T ss_pred -hhhHhhhhcccccceEEEecCcc--cccCCccccccHHHhhccccc------cccCCCCcCCeEEEEECCCCCCCCceE
Confidence 222222222221 122222111 000011233456666543221 112233467899999999999999999
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
++||.++..++......+++..+|++++..|++|.+++..++.++..|+++++.+ ..+++.+++.++++++|++.++|+
T Consensus 180 ~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 258 (515)
T TIGR03098 180 VLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGLAAVPP 258 (515)
T ss_pred EEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceEecChH
Confidence 9999999988887777778899999999999999999888899999999999875 567899999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
++..|.+.. ....+++++|.++++|+++++++.+.+++.+++..+++.||+||++..............+++|.|++++
T Consensus 259 ~~~~l~~~~-~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~ 337 (515)
T TIGR03098 259 LWAQLAQLD-WPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNA 337 (515)
T ss_pred HHHHHHhcc-cCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCC
Confidence 999987653 2234678999999999999999999999988778899999999997654433322234567999999999
Q ss_pred cEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCC-----cccCceeeeecceEEEeCCCeEEEE
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMP-----IYKGMHLRRHGDIIKRTVGGYIIVQ 392 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~TGD~~~~~~~g~l~i~ 392 (512)
+++|+|+++.+++.|+ .||+++ ++..+.+| +.+++.+...|...+ ...+.+||+|||+|+++++|++++.
T Consensus 338 ~~~i~~~~~~~~~~~~--~Gel~v~g~~~~~gy--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~ 413 (515)
T TIGR03098 338 EVLVLREDGSECAPGE--EGELVHRGALVAMGY--WNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFV 413 (515)
T ss_pred EEEEECCCCCCCCCCC--ceEEEEcCchhhccc--cCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEE
Confidence 9999999999999998 699999 44433322 223333333333221 1234568999999999999999999
Q ss_pred eccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCC
Q 010344 393 GRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNP 472 (512)
Q Consensus 393 gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 472 (512)
||.+|+|+.+|.+|+|.+||+++. .+|.|.+++|++.+++..+ +.++++++..++.. .+.+++.++ +.++|++
T Consensus 414 GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~~~~~~~~~-~~~~~l~~~----l~~~l~~ 486 (515)
T TIGR03098 414 GRRDEMIKTSGYRVSPTEVEEVAY-ATGLVAEAVAFGVPDPTLG-QAIVLVVTPPGGEE-LDRAALLAE----CRARLPN 486 (515)
T ss_pred eccccceecCCEEeCHHHHHHHHh-cCCCeeEEEEEeccCcccC-ceEEEEEEeCCCCC-CCHHHHHHH----HHhhCcc
Confidence 999999999999999999999998 8999999999999998888 88888888755443 555555554 4567889
Q ss_pred ccceeeEEEecCCCCCCCchHHHHHHHH
Q 010344 473 LFKVSLVKIVLEFPRTASNKLLRRVLKD 500 (512)
Q Consensus 473 ~~~p~~i~~~~~iP~t~~GKi~r~~l~~ 500 (512)
+++|..++++++||+|.+||++|++|++
T Consensus 487 ~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 487 YMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred ccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 9999999999999999999999999974
No 38
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-61 Score=501.53 Aligned_cols=479 Identities=20% Similarity=0.227 Sum_probs=375.3
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++|+++...
T Consensus 66 ~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~----- 140 (573)
T PRK05605 66 QVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVA----- 140 (573)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCCceEEeeccCC-cc--------------------cccccccCccHHHHhhccCCCCCCCCCCCCCCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGD-DV--------------------GIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPV 139 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (512)
..+..+........++...... .. ......+..+|.++....... ............
T Consensus 141 -~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 218 (573)
T PRK05605 141 -PTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGG-DGSDVSHPRPTP 218 (573)
T ss_pred -HHHHhhhhccccceeEeeecccccccccccccccccccccccccccccCCCcceeHHHHhhccccc-cccccCCCCCCC
Confidence 1222222211111111110000 00 000112344677665542220 001112223457
Q ss_pred CCeEEEEecCCCCCCCceEEecCchhHHHHHHhhcccc-c-cCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCC
Q 010344 140 DSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHID-M-KVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSP 216 (512)
Q Consensus 140 ~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~-~-~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~ 216 (512)
+++++++|||||||.||+|++||.++..++......+. + ..++++++..|++|.+++.. ++.+++.|+++++.+ ..
T Consensus 219 ~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~ 297 (573)
T PRK05605 219 DDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLP-AP 297 (573)
T ss_pred CCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeC-CC
Confidence 88999999999999999999999999877665433322 2 34789999999999998765 667889999998875 56
Q ss_pred chhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccce
Q 010344 217 LERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASS 296 (512)
Q Consensus 217 ~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 296 (512)
+++.+++.++++++|++.++|++++.|++.......+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++++
T Consensus 298 ~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~ 376 (573)
T PRK05605 298 DIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAMALPVSTVELWEKLT-GGLLVEGYGLTETSPI 376 (573)
T ss_pred CHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCCcCCHHHHHHHHHHh-CCCeecccccchhchh
Confidence 789999999999999999999999999987666667789999999999999999999988776 6889999999999987
Q ss_pred ecccCCCCCCcccccccccCCccEEEeCCC--CCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCce
Q 010344 297 YIQGSMLQPQAFGAFSTATMTTGFVILDEL--GVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMH 373 (512)
Q Consensus 297 ~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~--~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (512)
+..+........+++|.|.+++.++|+|++ +.+++.|+ .|||++ ++..+.+ ++.+++.+...|. ++
T Consensus 377 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~~-------~g 445 (573)
T PRK05605 377 IVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGE--EGELLVRGPQVFKG--YWNRPEETAKSFL-------DG 445 (573)
T ss_pred hhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCC--eeEEEEecCchhhh--hcCChhHhhhccc-------CC
Confidence 665544344456789999999999999965 58899998 699999 4443332 2223333333332 24
Q ss_pred eeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCC
Q 010344 374 LRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQ 453 (512)
Q Consensus 374 ~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~ 453 (512)
||+|||+|+++++|++++.||.+|+++.+|++|+|.+||+++. .++.|.++++++.+++..+ +.+++++++.++.. .
T Consensus 446 ~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~-~~~~i~~~~v~~~~~~~~~-~~~~~~vv~~~~~~-~ 522 (573)
T PRK05605 446 WFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLR-EHPGVEDAAVVGLPREDGS-EEVVAAVVLEPGAA-L 522 (573)
T ss_pred CcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHH-hCcccceEEEEeeecccCC-eEEEEEEEECCCCC-C
Confidence 9999999999999999999999999999999999999999998 8999999999999988777 89999999887644 5
Q ss_pred cHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhh
Q 010344 454 PVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELS 507 (512)
Q Consensus 454 ~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 507 (512)
+.+++. ++++++|+.+++|..|+++++||+|.+||++|++|++++.+++.
T Consensus 523 ~~~~l~----~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~~~~~~ 572 (573)
T PRK05605 523 DPEGLR----AYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREELLEKLG 572 (573)
T ss_pred CHHHHH----HHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHHHHHhc
Confidence 555544 44557788899999999999999999999999999999987654
No 39
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.5e-62 Score=515.72 Aligned_cols=469 Identities=19% Similarity=0.191 Sum_probs=355.6
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
.++++|++|.+.+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++++++++++++.........
T Consensus 240 ~~~~lA~~L~~~~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~- 318 (718)
T PRK08043 240 KTLFVGRILEKYSVEGERIGLMLPNATISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKL- 318 (718)
T ss_pred HHHHHHHHHHHhcCCCceEEEEcCCcHHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccC-
Confidence 4788999997669999999999999999999999999999999999999999999999999999999998754311100
Q ss_pred cchhhHHhcCCC-ceEEeeccCCcccccccccCccHHHH-hhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 82 PLYSKVAEAGPL-KAVVLPVIGDDVGIQLRQQDVSWKDF-LSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 82 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
..+....+. ..+++.... ....+.+. ...... ...........++++++++|||||||.||||+
T Consensus 319 ---~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~ 384 (718)
T PRK08043 319 ---WHLPEQLTQVRWVYLEDLK---------DDVTTADKLWIFAHL--LMPRLAQVKQQPEDAALILFTSGSEGHPKGVV 384 (718)
T ss_pred ---CChhhhhccccEEEhhhhh---------hhcchhHHHHHHHHH--hCCccccCCCCCCCeEEEEECCCCCCCCCEEE
Confidence 001111111 111111000 00011110 000000 00001112235689999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+||.++.+........+++.++|++++.+|++|.+++.. ++.++..|+++++.+....+..+++.++++++|+++++|+
T Consensus 385 ~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~ 464 (718)
T PRK08043 385 HSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTST 464 (718)
T ss_pred EcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHH
Confidence 999999988877777778899999999999999999865 8899999999998775456678889999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
++..+.+.. ...++++||.+++||+++++++.+.+++.+ ++++++.||+||+++..+.... .....+++|+|++++
T Consensus 465 ~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~ 540 (718)
T PRK08043 465 FLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYGVTECAPVVSINVP-MAAKPGTVGRILPGM 540 (718)
T ss_pred HHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccCcccccceEEecCC-cccCCCCCCCcCCCC
Confidence 998876542 345678999999999999999999998877 7899999999999876543322 234568999999999
Q ss_pred cEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeE-EecCCcccCceeeeecceEEEeCCCeEEEEeccC
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVY-FSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD 396 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~ 396 (512)
+++|+|+++. ++ .|||++ ++..+.+|....+++..... .........+|||+|||+|++|+||+++++||.|
T Consensus 541 ~~~i~d~~~~----~~--~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~ 614 (718)
T PRK08043 541 DARLLSVPGI----EQ--GGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAK 614 (718)
T ss_pred eeEEecCCCC----CC--ceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCC
Confidence 9999987653 34 499999 55554433211012211100 0001111245899999999999999999999999
Q ss_pred ceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhc-cCCccc
Q 010344 397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRN-LNPLFK 475 (512)
Q Consensus 397 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~-l~~~~~ 475 (512)
|+|+++|++|+|.|||+++. .|+.+.+++|++.+++..+ +.++++++ +.. .+.+++.++++ ++ |+.|++
T Consensus 615 d~I~~~G~~V~p~eIE~~l~-~~~~~~~~avv~~~~~~~g-e~~v~~~~---~~~-~~~~~l~~~~~----~~~l~~~~v 684 (718)
T PRK08043 615 RFAKIAGEMVSLEMVEQLAL-GVSPDKQHATAIKSDASKG-EALVLFTT---DSE-LTREKLQQYAR----EHGVPELAV 684 (718)
T ss_pred CeeEeCcEEcCHHHHHHHHH-hCCccceEEEEEccCCCCC-ceEEEEEc---Ccc-cCHHHHHHHHH----hcCCCcccC
Confidence 99999999999999999998 7888888888998888777 77777664 222 45555555554 44 899999
Q ss_pred eeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 476 VSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 476 p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
|..|++++++|+|++||++|++|++++.+.
T Consensus 685 P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 714 (718)
T PRK08043 685 PRDIRYLKQLPLLGSGKPDFVTLKSMVDEP 714 (718)
T ss_pred CceEEEecccCcCCCCCcCHHHHHHHHhcc
Confidence 999999999999999999999999988763
No 40
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.2e-61 Score=496.33 Aligned_cols=469 Identities=18% Similarity=0.196 Sum_probs=369.7
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++++++... ....
T Consensus 62 ~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~-~~~~ 140 (538)
T TIGR03208 62 RVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFR-GFDH 140 (538)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccc-cccH
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987431 0001
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCC---CCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPK---YYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
......+....+....++.... .+...|++++.......... ........++++++++|||||||.||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~ 212 (538)
T TIGR03208 141 AAMARELQSKLPALRQVVVIDG--------DGDDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKG 212 (538)
T ss_pred HHHHHHHhccCCcceEEEEecC--------CCCcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcE
Confidence 1111112222221111111111 01123444443221100000 011123456889999999999999999
Q ss_pred EEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 158 IPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
|+++|+++...+......+++..+|++++.+|++|..++.. ++.+++.|+++++.+ ..++..+++.++++++|++.++
T Consensus 213 v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~ 291 (538)
T TIGR03208 213 VMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQD-IWNPARAAELIRETGVTFTMAS 291 (538)
T ss_pred EEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecC-ccCHHHHHHHHHHhCCeEEecC
Confidence 99999999998888777788889999999999999988754 888999999998865 5678999999999999999999
Q ss_pred hHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-CCccccccccc
Q 010344 237 PSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ-PQAFGAFSTAT 315 (512)
Q Consensus 237 P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~p~ 315 (512)
|+++..+.........+++++|.+++||+++++++.+.+.+.+ ++++++.||+||++.+........ .....++|.|+
T Consensus 292 p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 370 (538)
T TIGR03208 292 TPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL-GALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPL 370 (538)
T ss_pred HHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-CCeEEeeeccCcCCCccccCcccchhhccCcccccC
Confidence 9999988776544456778999999999999999999988877 688999999999987654433221 12235789999
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEec
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGR 394 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR 394 (512)
++++++|+|+++++++.|+ .|||++ ++....+| +.+++.+. ..+++||+|||+|+++++|+++++||
T Consensus 371 ~g~~v~i~~~~~~~~~~g~--~Gel~v~g~~~~~gy--~~~~~~~~--------~~~~~~~~TGD~~~~~~~g~l~~~gR 438 (538)
T TIGR03208 371 PGVEVKVIDANGAKLSQGE--TGRLLVRGCSNFGGY--LKRPHLNS--------TDAEGWFDTGDLAFQDAEGYIRINGR 438 (538)
T ss_pred CCCEEEEECCCCCCCcCCC--CcEEEEecCcccccc--cCCccccc--------ccCCCceeccceEEECCCCcEEEEec
Confidence 9999999999999999998 699999 44433321 22222221 13568999999999999999999999
Q ss_pred cCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcc
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLF 474 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 474 (512)
.+|+|+.+|++|+|.+||++|. +||+|.+++|++.++...+ +.+.+++++.++.. .+..++.+++++ .+++.|+
T Consensus 439 ~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~a~v~~~~~~~-~~~~~l~~~~~~---~~l~~~~ 512 (538)
T TIGR03208 439 SKDVIIRGGENIPVVEIENLLY-QHPAVAQVAIVAYPDERLG-ERACAVVVPKPGCT-LDFAAMVAFLKA---QKVALQY 512 (538)
T ss_pred cCceEEECCEEECHHHHHHHHh-cCcceeeEEEEeccCCCCC-ceEEEEEEECCCCC-CCHHHHHHHHHh---cchhhcc
Confidence 9999999999999999999998 8999999999999988877 89999999876544 566666655542 3688899
Q ss_pred ceeeEEEecCCCCCCCchHHHHHHH
Q 010344 475 KVSLVKIVLEFPRTASNKLLRRVLK 499 (512)
Q Consensus 475 ~p~~i~~~~~iP~t~~GKi~r~~l~ 499 (512)
+|..|++++++|+|++||++|++|+
T Consensus 513 ~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 513 IPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred CCcEEEEeccCCCCCccccchHhhc
Confidence 9999999999999999999999986
No 41
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-61 Score=492.78 Aligned_cols=454 Identities=18% Similarity=0.183 Sum_probs=367.6
Q ss_pred cHHHHHHHHhc-c-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCc
Q 010344 2 SYRLVANALDT-M-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 79 (512)
Q Consensus 2 ~~~~~a~~L~~-~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~ 79 (512)
.++++|++|++ . +++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++.++++++++++...
T Consensus 36 ~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~---- 111 (496)
T PRK06839 36 YVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQ---- 111 (496)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHH----
Confidence 47899999986 5 99999999999999999999999999999999999999999999999999999999987532
Q ss_pred cccchhhHHhcCCC-ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 80 KFPLYSKVAEAGPL-KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
+.+..+...... ..+.+ .++.++...... ......++++++++|||||||.||+|
T Consensus 112 --~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-------~~~~~~~~~~~~i~~TSGTTG~PK~v 167 (496)
T PRK06839 112 --NMALSMQKVSYVQRVISI---------------TSLKEIEDRKID-------NFVEKNESASFIICYTSGTTGKPKGA 167 (496)
T ss_pred --HHHHHhhhccCcceEEEe---------------cchHhhhccCCC-------CCCCCCCCCcEEEEeCCCCCCCCcEE
Confidence 112222111111 11111 123332221111 11234567899999999999999999
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
+++|.++..+.......+++..+|++++.+|++|..++.. ++.++..|+++++.+ ..+++.+++.++++++|++.++|
T Consensus 168 ~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 246 (496)
T PRK06839 168 VLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPR-KFEPTKALSMIEKHKVTVVMGVP 246 (496)
T ss_pred EEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEcc-CCCHHHHHHHHHhhCCeEEEehH
Confidence 9999998777666666678889999999999999999865 678899999988754 67789999999999999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC-CCCCcccccccccC
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM-LQPQAFGAFSTATM 316 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~~~~~~~~~G~p~~ 316 (512)
++++.|++.......+++++|.+++||+++++++.+.+.+. +.++.+.||+||++...+.... ......+++|.|++
T Consensus 247 ~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~ 324 (496)
T PRK06839 247 TIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVL 324 (496)
T ss_pred HHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEecccccccccCCCCcccCC
Confidence 99999988766666778899999999999999999998875 7889999999999875443322 22345678999999
Q ss_pred CccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEecc
Q 010344 317 TTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRA 395 (512)
Q Consensus 317 ~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~ 395 (512)
+++++|+|+++.+++.|+ .|||++ ++..+.+ ++.+++.+...+ .++||+|||+|+++++|++++.||.
T Consensus 325 ~~~~~i~d~~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~-------~~g~~~TGDl~~~~~~g~~~~~GR~ 393 (496)
T PRK06839 325 FCDYELIDENKNKVEVGE--VGELLIRGPNVMKE--YWNRPDATEETI-------QDGWLCTGDLARVDEDGFVYIVGRK 393 (496)
T ss_pred CceEEEECCCcCCCCCCC--ceEEEEECCCcchh--hcCChHHHHHHH-------cCCCeeecceEEEcCCCcEEEeccc
Confidence 999999999999999999 699999 4443322 111222222111 3579999999999999999999999
Q ss_pred CceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccc
Q 010344 396 DDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFK 475 (512)
Q Consensus 396 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 475 (512)
+|+|+.+|++|+|.+||++|. .+|+|.+++|++.+++..+ +.++++|+.+++.. .+.+++. +++.++|++|++
T Consensus 394 ~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~-~~~~~l~----~~~~~~l~~~~~ 466 (496)
T PRK06839 394 KEMIISGGENIYPLEVEQVIN-KLSDVYEVAVVGRQHVKWG-EIPIAFIVKKSSSV-LIEKDVI----EHCRLFLAKYKI 466 (496)
T ss_pred cceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-ceEEEEEEECCCCC-CCHHHHH----HHHHhhCcCCCC
Confidence 999999999999999999998 8999999999999998888 89999999987654 5555554 445577889999
Q ss_pred eeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 476 VSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 476 p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
|..|++++++|+|.+||++|++|+++.++
T Consensus 467 P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 467 PKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred CcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 99999999999999999999999988764
No 42
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-61 Score=496.87 Aligned_cols=474 Identities=20% Similarity=0.189 Sum_probs=382.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.+.++|+.|.+. +++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++++++...
T Consensus 45 ~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~----- 119 (523)
T PRK08316 45 AVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALA----- 119 (523)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchH-----
Confidence 468899999999 99999999999999999999999999999999999999999999999999999999997432
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
..+....+........+..... ..........+.++...... .........+++++++|||||||.||+|.+
T Consensus 120 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~ 191 (523)
T PRK08316 120 -PTAEAALALLPVDTLILSLVLG--GREAPGGWLDFADWAEAGSV-----AEPDVELADDDLAQILYTSGTESLPKGAML 191 (523)
T ss_pred -HHHHHHhhhcCccceeeeeccc--ccccccchhhHHHHHhcCCC-----ccCccCCCCCCeEEEEeCCCCCCCCcEEEE
Confidence 2222222222211111111100 00111223445554433222 112233457889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
||.++..+.......+++.+++++++.+|++|..++.. ++.++..|+++++.+ ..+++.+++.++++++|++.++|++
T Consensus 192 s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 270 (523)
T PRK08316 192 THRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSFFAPPTV 270 (523)
T ss_pred ecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEEEeCHHH
Confidence 99999988877777788999999999999999998865 666788999999975 4678999999999999999999999
Q ss_pred HHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC-CCCcccccccccCCc
Q 010344 240 VKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML-QPQAFGAFSTATMTT 318 (512)
Q Consensus 240 ~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~~ 318 (512)
+..+++.......+++++|.+++||+.++.++.+.+++.+++.++++.||+||++.+....... .....+++|+|++++
T Consensus 271 ~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~ 350 (523)
T PRK08316 271 WISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNV 350 (523)
T ss_pred HHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCc
Confidence 9999887666667788999999999999999999999988788999999999998765543322 223457899999999
Q ss_pred cEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCc
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADD 397 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d 397 (512)
+++|.|+++++++.|+ .|||++ ++....+| +.+++.+...| .++||+|||+|++++||+++++||.+|
T Consensus 351 ~~~i~~~~~~~~~~g~--~Gei~v~~~~~~~~y--~~~~~~~~~~~-------~~~~~~TGDl~~~~~~g~l~i~gR~~~ 419 (523)
T PRK08316 351 ETRVVDDDGNDVAPGE--VGEIVHRSPQLMLGY--WDDPEKTAEAF-------RGGWFHSGDLGVMDEEGYITVVDRKKD 419 (523)
T ss_pred EEEEEcCCCCCCCCCC--cceEEEECCchhhhh--cCCHHHHHHHh-------hCCCeeccceEEEcCCceEEEeccccc
Confidence 9999999999999999 699999 44443322 22333322222 247999999999999999999999999
Q ss_pred eeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcccee
Q 010344 398 TMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVS 477 (512)
Q Consensus 398 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~ 477 (512)
+|+.+|.+|+|.+||+.+. ++++|.+++|++.+++..+ +.++++++.+++.. .+.+++. ++++++|++|++|.
T Consensus 420 ~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~----~~~~~~l~~~~~p~ 492 (523)
T PRK08316 420 MIKTGGENVASREVEEALY-THPAVAEVAVIGLPDPKWI-EAVTAVVVPKAGAT-VTEDELI----AHCRARLAGFKVPK 492 (523)
T ss_pred EEEeCCeEECHHHHHHHHH-hCCChheEeEecccCcccC-CeEEEEEEECCCCC-CCHHHHH----HHHHHhcccCCCCc
Confidence 9999999999999999998 8999999999999998887 89999999887654 4555544 44556788999999
Q ss_pred eEEEecCCCCCCCchHHHHHHHHHHHhhhh
Q 010344 478 LVKIVLEFPRTASNKLLRRVLKDQLKHELS 507 (512)
Q Consensus 478 ~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 507 (512)
.+++++++|+|++||++|++|+++|.+.++
T Consensus 493 ~i~~v~~~p~t~~gKi~r~~l~~~~~~~~~ 522 (523)
T PRK08316 493 RVIFVDELPRNPSGKILKRELRERYAGAFT 522 (523)
T ss_pred EEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 999999999999999999999999987764
No 43
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.2e-62 Score=506.31 Aligned_cols=483 Identities=12% Similarity=0.085 Sum_probs=354.3
Q ss_pred cHHHHHHHHhc---c-CCCC-----------CEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCcc
Q 010344 2 SYRLVANALDT---M-FSKG-----------DAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAK 66 (512)
Q Consensus 2 ~~~~~a~~L~~---~-i~~g-----------d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 66 (512)
.++++|++|.+ . +++| |+|+|+++|+++|+++++||+++|++.+|+++.++.+++.++|++++++
T Consensus 100 ~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~ 179 (746)
T PTZ00342 100 KVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLE 179 (746)
T ss_pred HHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCC
Confidence 37899999996 5 9998 9999999999999999999999999999999999999999999999999
Q ss_pred EEEeccchhccCccccchhhHHhcCCCc--eEEeeccCCcc-----------------cccc------------------
Q 010344 67 GIFTQDFILRGGRKFPLYSKVAEAGPLK--AVVLPVIGDDV-----------------GIQL------------------ 109 (512)
Q Consensus 67 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----------------~~~~------------------ 109 (512)
+++++.... +.+..+....+.. +++++...... ....
T Consensus 180 ~lv~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (746)
T PTZ00342 180 WLCLDLDLV------EGLLERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDI 253 (746)
T ss_pred EEEEcHHHH------HHHHHhhccCCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccc
Confidence 999976432 2333333333322 22222110000 0000
Q ss_pred --------cccCccHHHHhhccCCC------------CCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecCchhHHHH
Q 010344 110 --------RQQDVSWKDFLSCVDYH------------PGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCA 169 (512)
Q Consensus 110 --------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~ 169 (512)
.+...+|.++....... ............++++++|+|||||||.||||++||+++.+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~ 333 (746)
T PTZ00342 254 SLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTV 333 (746)
T ss_pred cccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHH
Confidence 00001122222111000 0001112233467899999999999999999999999999887
Q ss_pred HHhhccc--cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHHHHHHcc-
Q 010344 170 AEAWGHI--DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNT- 246 (512)
Q Consensus 170 ~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~- 246 (512)
....... .....+++++.+|++|.+++...+.+++.|+++++.+. ++..+++.|++++||+++++|.++..|.+.
T Consensus 334 ~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~--~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i 411 (746)
T PTZ00342 334 VPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSK--DINYFSKDIYNSKGNILAGVPKVFNRIYTNI 411 (746)
T ss_pred HHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCC--CHHHHHHHHHHhCCcEEEchHHHHHHHHHHH
Confidence 6554321 23356899999999999999777888999999998763 678999999999999999999999988642
Q ss_pred -------CCCCC----------------------------------CCcCceeEEEeecCCCCchhhHHHHHhhCCCCee
Q 010344 247 -------NCLQG----------------------------------LDWTKIRSFASTGETSNVDDDLWLASKAYYKPII 285 (512)
Q Consensus 247 -------~~~~~----------------------------------~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~ 285 (512)
..... .-.+++|.+++||+++++++.+++...+ +++++
T Consensus 412 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~ 490 (746)
T PTZ00342 412 MTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYY 490 (746)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEE
Confidence 10000 0126899999999999999999998877 78999
Q ss_pred eecCCccccceecccCCCCCCccccccccc-CCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeE
Q 010344 286 ECCGGTELASSYIQGSMLQPQAFGAFSTAT-MTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVY 362 (512)
Q Consensus 286 ~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~-~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~ 362 (512)
++||+||+++..+.... .....+++|.|+ |+++++|+| +++...+.+. .|||++ ++.++.+| +.+++.+...
T Consensus 491 ~gYGlTEt~~~~~~~~~-~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~--~GEl~vrGp~v~~GY--~~~pe~T~~~ 565 (746)
T PTZ00342 491 QGYGLTETTGPIFVQHA-DDNNTESIGGPISPNTKYKVRTWETYKATDTLP--KGELLIKSDSIFSGY--FLEKEQTKNA 565 (746)
T ss_pred EeeccCcccceeeeccC-CCCCcccccCcCCCcEEEEEecccccccCCCCC--ceEEEEecCcccccc--cCChhhhhhh
Confidence 99999999765544332 345678999998 999999998 4434444444 499999 56555432 3345555544
Q ss_pred EecCCcccCceeeeecceEEEeCCCeEEEEeccCceee-ecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEE
Q 010344 363 FSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLV 441 (512)
Q Consensus 363 ~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~-~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~ 441 (512)
| +.+|||+|||+|++|+||+++|+||+||+|| .+|++|+|.+||+++. .||.|.+++|++.+.. ..++
T Consensus 566 f------~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~-~~p~V~~~~VvG~~~~----~~~~ 634 (746)
T PTZ00342 566 F------TEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYS-QISFINFCVVYGDDSM----DGPL 634 (746)
T ss_pred c------CcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHh-cCCCccEEEEEccCCc----cccE
Confidence 4 3468999999999999999999999999999 5899999999999998 8999999999986422 5789
Q ss_pred EEEEecCC----------------CCCCc-----------HHHHHHHHHHHH-----HhccCCccceeeEEEec-CC---
Q 010344 442 ICVVLKKG----------------FTSQP-----------VDKLKMIFSKAI-----QRNLNPLFKVSLVKIVL-EF--- 485 (512)
Q Consensus 442 a~v~~~~~----------------~~~~~-----------~~~l~~~~~~~~-----~~~l~~~~~p~~i~~~~-~i--- 485 (512)
|+|+++.+ ....+ ..++.+.+.+.+ +.+|..|.+++.|.++. ++
T Consensus 635 Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~ 714 (746)
T PTZ00342 635 AIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTN 714 (746)
T ss_pred EEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCC
Confidence 99988641 00001 112344444333 23799999999888875 33
Q ss_pred -CCCCCchHHHHHHHHHHHhhhhcc
Q 010344 486 -PRTASNKLLRRVLKDQLKHELSVR 509 (512)
Q Consensus 486 -P~t~~GKi~r~~l~~~~~~~~~~~ 509 (512)
-.|++.|+.|+.+.+.|+..++.-
T Consensus 715 ~~lTpt~KlkR~~v~~~y~~~i~~i 739 (746)
T PTZ00342 715 NYLTPTFKVKRFYVFKDYAFFIDQV 739 (746)
T ss_pred CccChhhhhhHHHHHHHHHHHHHHH
Confidence 289999999999999999766653
No 44
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.4e-61 Score=497.71 Aligned_cols=485 Identities=17% Similarity=0.191 Sum_probs=380.7
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++++++.++.+++.+++++++++++++++..... +.
T Consensus 54 ~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~ 132 (558)
T PRK12583 54 AVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTS-DY 132 (558)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEecccccc-ch
Confidence 478999999999 9999999999999999999999999999999999999999999999999999999998642110 00
Q ss_pred ccchhhHHhc-------------CCCceEEeeccCCcccccccccCccHHHHhhccCCCCC-CCCCCCCCCCCCCeEEEE
Q 010344 81 FPLYSKVAEA-------------GPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPG-PKYYPPVYRPVDSVINIL 146 (512)
Q Consensus 81 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ 146 (512)
...+...... .+....++..... .......|+++......... ..........++++++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 207 (558)
T PRK12583 133 HAMLQELLPGLAEGQPGALACERLPELRGVVSLAPA-----PPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQ 207 (558)
T ss_pred hHHHHHHhhhhccccccccccccCCcceEEEEecCC-----CCccccchHhhhhcccccccccccccccccCCCCcEEEE
Confidence 1111111111 0011111111110 01123345555433322000 001112234567899999
Q ss_pred ecCCCCCCCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHH
Q 010344 147 FSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFV 225 (512)
Q Consensus 147 ~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l 225 (512)
|||||||.||+|+++|.++.+++......+++.++|++++..|++|.+++.. ++.++..|+++++.....++..+++.+
T Consensus 208 ~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i 287 (558)
T PRK12583 208 YTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAV 287 (558)
T ss_pred ECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHH
Confidence 9999999999999999999888887777788899999999999999999865 788899999998866667788999999
Q ss_pred HhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-
Q 010344 226 QDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ- 304 (512)
Q Consensus 226 ~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~- 304 (512)
+++++|+++++|+++..++........+++++|.+++||+++++++.+++.+.++...+.+.||+||++.+...+....
T Consensus 288 ~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~ 367 (558)
T PRK12583 288 EEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD 367 (558)
T ss_pred HHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc
Confidence 9999999999999999888765555667899999999999999999999998886678999999999998665443221
Q ss_pred -CCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEE
Q 010344 305 -PQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIK 382 (512)
Q Consensus 305 -~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~ 382 (512)
.....++|.|.+++.++|+|+++.+++.|+ .|||++ ++....+| +.+++.+...+ ..++||+|||+|+
T Consensus 368 ~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~gy--~~~~~~~~~~~------~~~~~~~TGDl~~ 437 (558)
T PRK12583 368 LERRVETVGRTQPHLEVKVVDPDGATVPRGE--IGELCTRGYSVMKGY--WNNPEATAESI------DEDGWMHTGDLAT 437 (558)
T ss_pred cccccCCCCccCCCCeEEEECCCCCCCCCCC--eeEEEEEeCccchhh--cCChHHHHhhc------CCCCCeeccceEE
Confidence 234578999999999999998899999999 699999 44443321 22222222222 2457999999999
Q ss_pred EeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHH
Q 010344 383 RTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIF 462 (512)
Q Consensus 383 ~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~ 462 (512)
+++||++++.||.+|+++.+|.+|+|.+||++|. .+|.|.+++|++.++...+ +.+++++++.++.. .+.+++.+
T Consensus 438 ~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~i~~-- 512 (558)
T PRK12583 438 MDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLF-THPAVADVQVFGVPDEKYG-EEIVAWVRLHPGHA-ASEEELRE-- 512 (558)
T ss_pred ECCCccEEEEecccceeEECCEEeCHHHHHHHHH-hCCCeeEEEEEeeecCCCC-cEEEEEEEECCCCC-CCHHHHHH--
Confidence 9999999999999999999999999999999998 8999999999999988777 88999999876544 45555444
Q ss_pred HHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhhcc
Q 010344 463 SKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVR 509 (512)
Q Consensus 463 ~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~ 509 (512)
+++++|++|++|..++++++||+|++||++|+.|++++.+++..+
T Consensus 513 --~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~~~~~~~ 557 (558)
T PRK12583 513 --FCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISIEELALP 557 (558)
T ss_pred --HHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHHhhcCCC
Confidence 455788899999999999999999999999999999988776543
No 45
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.7e-61 Score=484.68 Aligned_cols=419 Identities=16% Similarity=0.133 Sum_probs=337.9
Q ss_pred HHHHHHHHhcc-C-CCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 3 YRLVANALDTM-F-SKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 3 ~~~~a~~L~~~-i-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
++++|++|++. + ++|++|+++++|+++++++++||+++|++++|+||.++.+++.+++++++++++++++....
T Consensus 29 ~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---- 104 (452)
T PRK07445 29 AQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGLDQLKL---- 104 (452)
T ss_pred HHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEecCcccc----
Confidence 67999999998 6 67999999999999999999999999999999999999999999999999999998763210
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
. .. .. ... ......++++++++|||||||.||+|++
T Consensus 105 --~-------------~~------------~~----------~~~-------~~~~~~~~~~~~i~~TSGTTG~PKgV~~ 140 (452)
T PRK07445 105 --S-------------HP------------PP----------LPS-------QGILPNLETGWIMIPTGGSSGQIRFAIH 140 (452)
T ss_pred --c-------------cC------------CC----------CCc-------cccCCCCCCcEEEEeCCCCCCCCcEEEe
Confidence 0 00 00 000 0011245789999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
||+++..++......+++.+ ++.++.+|++|.+++..++.+++.|+++++.+.. ..........++++|++.++|+++
T Consensus 141 t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~-~~~~~~~~~~~~~~t~~~~vP~~l 218 (452)
T PRK07445 141 TWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYK-RLKSGQELPPNPSDFFLSLVPTQL 218 (452)
T ss_pred chHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChH-hccchhhhhhhcCceEEEehHHHH
Confidence 99999888777666666654 4578889999999998888999999999987632 222223444578999999999999
Q ss_pred HHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-CCcccccccccCCcc
Q 010344 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ-PQAFGAFSTATMTTG 319 (512)
Q Consensus 241 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~p~~~~~ 319 (512)
..+++.. ..+++++|.+++||+++++++.+.+.. + +.++++.||+||++..+....... ....+++|+|.++++
T Consensus 219 ~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~ 293 (452)
T PRK07445 219 QRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQ 293 (452)
T ss_pred HHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCe
Confidence 9987632 345789999999999999998887764 3 788999999999986543322111 123568999999999
Q ss_pred EEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCce
Q 010344 320 FVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDT 398 (512)
Q Consensus 320 ~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~ 398 (512)
++|+ .|+ .|||++ ++..+.+ |+.+ ....++||+|||+|++|+||++++.||.||+
T Consensus 294 v~i~--------~g~--~Gel~v~g~~~~~g------------Y~~~--~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ 349 (452)
T PRK07445 294 ITIP--------ANQ--TGNITIQAQSLALG------------YYPQ--ILDSQGIFETDDLGYLDAQGYLHILGRNSQK 349 (452)
T ss_pred EEEc--------CCC--cceEEEeCCccchh------------hcCC--ccCCCCEEECCCEEEEcCCCCEEEEeecCCE
Confidence 9997 344 599999 5444433 2211 1134579999999999999999999999999
Q ss_pred eeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceee
Q 010344 399 MNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSL 478 (512)
Q Consensus 399 i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~ 478 (512)
|+++|++|+|.+||++|. +||+|.+++|++.+++..| +.++++++..++. .+.+++. +++.++|++|++|+.
T Consensus 350 I~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~~~~~~g-~~~~a~vv~~~~~--~~~~~l~----~~~~~~L~~~~~P~~ 421 (452)
T PRK07445 350 IITGGENVYPAEVEAAIL-ATGLVQDVCVLGLPDPHWG-EVVTAIYVPKDPS--ISLEELK----TAIKDQLSPFKQPKH 421 (452)
T ss_pred EEECCEEECHHHHHHHHH-hCCCcceEEEEeccCcCCC-cEEEEEEEeCCCC--CCHHHHH----HHHHHhCCcccCCeE
Confidence 999999999999999998 8999999999999998888 8899999987552 4444444 455578899999999
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHHhhhhc
Q 010344 479 VKIVLEFPRTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 479 i~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
++++++||+|++||++|++|++++.++++.
T Consensus 422 i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 451 (452)
T PRK07445 422 WIPVPQLPRNPQGKINRQQLQQIAVQRLGL 451 (452)
T ss_pred EEEecCCCCCCCcccCHHHHHHHHHHhhCC
Confidence 999999999999999999999999988764
No 46
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=3.9e-61 Score=496.31 Aligned_cols=467 Identities=19% Similarity=0.197 Sum_probs=369.0
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++++...
T Consensus 64 ~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~----- 138 (546)
T PLN02330 64 DTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNY----- 138 (546)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchh-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999997532
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
..+. . .....+++.... ......|.+++...... ..........++++++++|||||||.||+|++
T Consensus 139 -~~~~---~-~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~ 204 (546)
T PLN02330 139 -GKVK---G-LGLPVIVLGEEK-------IEGAVNWKELLEAADRA--GDTSDNEEILQTDLCALPFSSGTTGISKGVML 204 (546)
T ss_pred -hhHh---h-cCCcEEEecCCC-------CCCcccHHHHHhhcccc--CcccccccCCcccEEEEEeCCCCcCCCcEEEE
Confidence 1111 1 111222222110 12345577776544321 11112223456789999999999999999999
Q ss_pred cCchhHHHHHHhhcccc--ccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 161 TQLSPIRCAAEAWGHID--MKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
+|.++..++.......+ ....++.+...|++|.+++.. ++.++..|+++++.+ ..++..+++.++++++|.+.++|
T Consensus 205 s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P 283 (546)
T PLN02330 205 THRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMS-RFELRTFLNALITQEVSFAPIVP 283 (546)
T ss_pred ehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEec-ccCHHHHHHHHHHcCCeeeecCC
Confidence 99998876654321111 223467888999999988864 778899999988875 56788999999999999999999
Q ss_pred HHHHHHHccCCCCCCCcC--ceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC----CCccccc
Q 010344 238 SLVKAWKNTNCLQGLDWT--KIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ----PQAFGAF 311 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~--~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~----~~~~~~~ 311 (512)
+++..|+........++. ++|.++++|+++++++.+++.+.+++.++++.||+||++++........ ....+++
T Consensus 284 ~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~v 363 (546)
T PLN02330 284 PIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSV 363 (546)
T ss_pred HHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCcc
Confidence 999999876544444444 4789999999999999999999988899999999999986544332111 1234689
Q ss_pred ccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeE
Q 010344 312 STATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYI 389 (512)
Q Consensus 312 G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l 389 (512)
|.|+++++++|+| +++++++.|+ .|||++ ++....+| +.+++.+...+ +.++||+|||+|++++||++
T Consensus 364 G~~~~~~~v~i~d~~~~~~~p~g~--~Gel~v~g~~~~~gy--~~~~~~~~~~~------~~~g~~~TGD~~~~~~dG~l 433 (546)
T PLN02330 364 GFILPNLEVKFIDPDTGRSLPKNT--PGELCVRSQCVMQGY--YNNKEETDRTI------DEDGWLHTGDIGYIDDDGDI 433 (546)
T ss_pred ccccCCcEEEEEeCCCCccCCCCC--ceEEEEecchhhhhh--ccCccchhhhc------cCCCceecccEEEEeCCCcE
Confidence 9999999999999 6788999999 699999 44443322 22333333222 35689999999999999999
Q ss_pred EEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhc
Q 010344 390 IVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRN 469 (512)
Q Consensus 390 ~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~ 469 (512)
++.||.+|+|+++|++|+|.+||+++. .+|.|.+++|++++++..+ +.+.++|++.++.. .+.+++ +++++++
T Consensus 434 ~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~a~v~~~~~~~-~~~~~l----~~~~~~~ 506 (546)
T PLN02330 434 FIVDRIKELIKYKGFQVAPAELEAILL-THPSVEDAAVVPLPDEEAG-EIPAACVVINPKAK-ESEEDI----LNFVAAN 506 (546)
T ss_pred EEEechHHhhhcCCEEECHHHHHHHHH-hCCchheEEEEeccccccC-ceeEEEEEECCCCC-CCHHHH----HHHHHHh
Confidence 999999999999999999999999998 8999999999999988888 88999999876544 454444 4455578
Q ss_pred cCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 470 LNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 470 l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
|++|+.|+.|+++++||+|++||++|++|++++...
T Consensus 507 l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 507 VAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred cccccCceEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 889999999999999999999999999999999755
No 47
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.2e-61 Score=494.36 Aligned_cols=474 Identities=21% Similarity=0.205 Sum_probs=377.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++++++++++++....
T Consensus 51 ~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~----- 125 (542)
T PRK07786 51 RVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA----- 125 (542)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH-----
Confidence 368899999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
+.+.......+....++...+. ...+..+++++...... .........+++++++|||||||.||+|++
T Consensus 126 -~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~ 194 (542)
T PRK07786 126 -PVATAVRDIVPLLSTVVVAGGS-----SDDSVLGYEDLLAEAGP-----AHAPVDIPNDSPALIMYTSGTTGRPKGAVL 194 (542)
T ss_pred -HHHHHhhhccCccceEEEecCC-----CcccccCHHHHhhccCC-----CCCCCCCCCCCeEEEEeCCCCCccchhhhh
Confidence 2222222222221122211111 01123456666543322 112223456789999999999999999999
Q ss_pred cCchhHHHHHHhhccccc-cCCcEEEecCCccchhhhHHHHhhhccCceEEEecC-CCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDM-KVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG-SPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|.++...+......+++ ..++++++..|++|.+++..++.++..|+++++.+. ..++..+++.++++++|.++++|+
T Consensus 195 s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~ 274 (542)
T PRK07786 195 THANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPA 274 (542)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHH
Confidence 999998888776666666 578899999999999998888999999999998652 457889999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC-CCCcccccccccCC
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML-QPQAFGAFSTATMT 317 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~ 317 (512)
++..|+........+ .++|.+++||+++++++.+.+.+.+++.++++.||+||++.+.+..... .....+++|.|+++
T Consensus 275 ~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~ 353 (542)
T PRK07786 275 QWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPT 353 (542)
T ss_pred HHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCC
Confidence 999998765433333 3799999999999999999999999889999999999998765433221 22345789999999
Q ss_pred ccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccC
Q 010344 318 TGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD 396 (512)
Q Consensus 318 ~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~ 396 (512)
+.++|+|+++++++.|+ .|||++ ++....+| +.+++.+...|. ++||+|||+++++++|+++++||.+
T Consensus 354 ~~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~gy--~~~~~~~~~~f~-------~~~~~TGDl~~~~~~g~~~i~GR~~ 422 (542)
T PRK07786 354 VAARVVDENMNDVPVGE--VGEIVYRAPTLMSGY--WNNPEATAEAFA-------GGWFHSGDLVRQDEEGYVWVVDRKK 422 (542)
T ss_pred ceEEEECCCCCCCcCCC--ceEEEEEChhhhhhh--cCCHHHHHHHhh-------CCcccccceEEEcCCceEEEEeccc
Confidence 99999999999999998 699999 55444332 223333333331 4699999999999999999999999
Q ss_pred ceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce
Q 010344 397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV 476 (512)
Q Consensus 397 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 476 (512)
|+|+++|.+|+|.+||++|. ++|.|.+++|++.++...+ +.+.+++++.++......+ .+.+.+.+++++|+.|
T Consensus 423 d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~----~l~~~l~~~l~~~~~P 496 (542)
T PRK07786 423 DMIISGGENIYCAEVENVLA-SHPDIVEVAVIGRADEKWG-EVPVAVAAVRNDDAALTLE----DLAEFLTDRLARYKHP 496 (542)
T ss_pred ceEEeCCEEECHHHHHHHHH-hCCCccEEEEEeccCcccC-ceEEEEEEECCCCCCCCHH----HHHHHHHhhccCCCCC
Confidence 99999999999999999998 8999999999998887777 7888888877643223333 4555566788999999
Q ss_pred eeEEEecCCCCCCCchHHHHHHHHHHHhhhhcc
Q 010344 477 SLVKIVLEFPRTASNKLLRRVLKDQLKHELSVR 509 (512)
Q Consensus 477 ~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~ 509 (512)
..|+++++||+|++||++|++|++++.+.....
T Consensus 497 ~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~~ 529 (542)
T PRK07786 497 KALEIVDALPRNPAGKVLKTELRERYGACVNVE 529 (542)
T ss_pred CEEEEeccCCCCCcccccHHHHHHHHHhhhchh
Confidence 999999999999999999999999998765543
No 48
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.2e-60 Score=494.90 Aligned_cols=487 Identities=18% Similarity=0.194 Sum_probs=383.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|..+.+++..++++++++++++++..... ..
T Consensus 52 ~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~ 130 (559)
T PRK08315 52 EVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDS-DY 130 (559)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEecccccc-ch
Confidence 368999999999 9999999999999999999999999999999999999999999999999999999998743110 00
Q ss_pred ccchhhHHhcC-------------CCceEEeeccCCcccccccccCccHHHHhhccCCCCCCC-CCCCCCCCCCCeEEEE
Q 010344 81 FPLYSKVAEAG-------------PLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPK-YYPPVYRPVDSVINIL 146 (512)
Q Consensus 81 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~ 146 (512)
.+.+....... +....++..... ...+...|.++........... .........+++++++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 205 (559)
T PRK08315 131 VAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE-----KHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQ 205 (559)
T ss_pred HHHHHHhhhhhhcccccccccccCCCceeEEeeccc-----CCcccccHHHHHhhccccccccccchhccCCCCCcEEEE
Confidence 01111111110 000011110100 0122345666554332100000 1112234567899999
Q ss_pred ecCCCCCCCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHH
Q 010344 147 FSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFV 225 (512)
Q Consensus 147 ~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l 225 (512)
|||||||.||+|.+||.++..++......+++.++|+++...|++|..++.. ++.++..|+++++.....++..+++.+
T Consensus 206 ~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l 285 (559)
T PRK08315 206 YTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAV 285 (559)
T ss_pred EcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHH
Confidence 9999999999999999999988888777788999999999999999998865 888999999999766667889999999
Q ss_pred HhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-
Q 010344 226 QDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ- 304 (512)
Q Consensus 226 ~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~- 304 (512)
+++++|+++++|+++..++........+++++|.++++|++++.++.+.+.+.++..++++.||+||++...+......
T Consensus 286 ~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~ 365 (559)
T PRK08315 286 EEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP 365 (559)
T ss_pred HHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc
Confidence 9999999999999999888766555667889999999999999999999998886667999999999987655433222
Q ss_pred -CCcccccccccCCccEEEeCCC-CCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceE
Q 010344 305 -PQAFGAFSTATMTTGFVILDEL-GVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDII 381 (512)
Q Consensus 305 -~~~~~~~G~p~~~~~~~i~d~~-~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~ 381 (512)
.....++|.|++++.++|+|++ +++++.|+ .|||++ ++....+| +.+++.+...+ ..++||+|||+|
T Consensus 366 ~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~--~GEl~v~g~~~~~gy--~~~~~~~~~~~------~~~~~~~TGD~~ 435 (559)
T PRK08315 366 LEKRVTTVGRALPHLEVKIVDPETGETVPRGE--QGELCTRGYSVMKGY--WNDPEKTAEAI------DADGWMHTGDLA 435 (559)
T ss_pred hhhccCCCCccCCCcEEEEEcCccCCcCCCCC--ceEEEEECchhhhhh--cCChhHHhhcC------CCCCCEEccceE
Confidence 2346789999999999999977 99999999 699999 54444332 22222222222 245799999999
Q ss_pred EEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHH
Q 010344 382 KRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMI 461 (512)
Q Consensus 382 ~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~ 461 (512)
+++++|+++++||.+|+++.+|.+|+|.+||++|. .+|+|.+++|++..++..+ +.++++|+..++.. .+..++.++
T Consensus 436 ~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~ 512 (559)
T PRK08315 436 VMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLY-THPKIQDVQVVGVPDEKYG-EEVCAWIILRPGAT-LTEEDVRDF 512 (559)
T ss_pred EEcCCceEEEEeeccceEEECCEEEcHHHHHHHHH-hCCCceEEEEEecCCCCCC-eEEEEEEEeCCCCC-CCHHHHHHH
Confidence 99999999999999999999999999999999998 8999999999999988777 78889998876544 555555554
Q ss_pred HHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhhcccC
Q 010344 462 FSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVRSR 511 (512)
Q Consensus 462 ~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~~~ 511 (512)
+.++|+.|++|..|+++++||+|++||++|.+|++++.+....+++
T Consensus 513 ----l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~~~~~~~~ 558 (559)
T PRK08315 513 ----CRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREMMIEELGLQAA 558 (559)
T ss_pred ----HHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHHHHhhhchhhc
Confidence 4567889999999999999999999999999999999988777653
No 49
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-61 Score=505.10 Aligned_cols=467 Identities=19% Similarity=0.161 Sum_probs=354.4
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeec-CCCcC--HHHHHHHHHhcCccEEEeccchhccC
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSI-ADSFA--AREIATRLRVSKAKGIFTQDFILRGG 78 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~iv~~~~~~~~~ 78 (512)
.++++|++|.+.+++||+|+++++|++++++++|||+++|++++|+ ++..+ .+++.+++++++++++|+++...
T Consensus 64 ~v~~lA~~L~~~~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~--- 140 (631)
T PRK07769 64 RNRAVGARLQQVTKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSA--- 140 (631)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHH---
Confidence 3678999997669999999999999999999999999999999999 45554 68899999999999999987532
Q ss_pred ccccchhhHHhcCCC--ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCc
Q 010344 79 RKFPLYSKVAEAGPL--KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPK 156 (512)
Q Consensus 79 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 156 (512)
+.+.......+. ...++.... +.+.. . .........++++++++|||||||.||
T Consensus 141 ---~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~---~-----~~~~~~~~~~~d~a~i~~TSGTTG~PK 196 (631)
T PRK07769 141 ---EGVRKFFRARPAKERPRVIAVDA-------------VPDEV---G-----ATWVPPEANEDTIAYLQYTSGSTRIPA 196 (631)
T ss_pred ---HHHHHHHhhccccccceEEEccc-------------ccccc---c-----cccCCCCCCCCCeEEEEeCCCCCCCCc
Confidence 112222111110 011111000 00000 0 001112345688999999999999999
Q ss_pred eEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC-C--chhhHHHHHHhcCc---
Q 010344 157 AIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS-P--LERSFGKFVQDSGV--- 230 (512)
Q Consensus 157 ~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~-~--~~~~~~~~l~~~~~--- 230 (512)
||++||+++.+.+......+++.+++++++.+|++|.+++..++.+++.|+++++.++. + ++..+++.++++++
T Consensus 197 gV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 276 (631)
T PRK07769 197 GVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTG 276 (631)
T ss_pred EEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccC
Confidence 99999999998877777777888999999999999999998777778889999887542 2 67889999999886
Q ss_pred eEEecchHHHHHHHcc---CC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhC-----CCCeeeecCCccccceeccc
Q 010344 231 SVLGTVPSLVKAWKNT---NC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAY-----YKPIIECCGGTELASSYIQG 300 (512)
Q Consensus 231 t~l~~~P~~~~~l~~~---~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-----~~~i~~~yG~tE~~~~~~~~ 300 (512)
+++.++|.++..++.. .. ....+++++|.+++||+++++++.+.+.+.+. ...+++.||+||++...+..
T Consensus 277 ~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~ 356 (631)
T PRK07769 277 GTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTT 356 (631)
T ss_pred ceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEecc
Confidence 7899999988776542 11 12457889999999999999999999988763 23599999999987654433
Q ss_pred CCCCC--------------------------CcccccccccCCccEEEeC-CCCCCCCCCCCccccccc-cccccccccc
Q 010344 301 SMLQP--------------------------QAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDR 352 (512)
Q Consensus 301 ~~~~~--------------------------~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~ 352 (512)
..... ....++|+|.++++++|+| +++++++.|+ .|||++ ++..+.+|
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge--~GEl~v~gp~v~~GY-- 432 (631)
T PRK07769 357 PMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQ--IGEIWLHGNNIGTGY-- 432 (631)
T ss_pred CCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCC--EEEEEecCCCccccc--
Confidence 21110 0124789999999999999 5789999999 799999 56555432
Q ss_pred ccccCcceeEEecCC-----------cccCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcc
Q 010344 353 LLNADHEEVYFSGMP-----------IYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADES 421 (512)
Q Consensus 353 ~~~~~~~~~~~~~~~-----------~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~ 421 (512)
+.+++.+...|...+ ...+++||+|||+|+++ ||+++|+||.||+||++|++|+|.|||++|.+.||.
T Consensus 433 ~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~ 511 (631)
T PRK07769 433 WGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKA 511 (631)
T ss_pred cCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhcccc
Confidence 334444444443211 01345899999999995 999999999999999999999999999999833899
Q ss_pred eee--eeEEeeCC-------------------CCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcc-ceeeE
Q 010344 422 ILE--TAAISVSP-------------------AGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLF-KVSLV 479 (512)
Q Consensus 422 v~~--~~v~~~~~-------------------~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~p~~i 479 (512)
|.+ ++|+++++ +..+ +.++++|++.++....+.++|.+++++++.. .|+ .|+.+
T Consensus 512 v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~g-e~~~a~v~~~~~~~~~~~~~l~~~~~~~l~~---~~~~~p~~~ 587 (631)
T PRK07769 512 LRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTS-EQLVIVAERAPGAHKLDPQPIADDIRAAIAV---RHGVTVRDV 587 (631)
T ss_pred ccCCcEEEEEecccccccccccccccccccccCCCC-ccEEEEEEecCccccccHHHHHHHHHHHHHH---HcCCCccEE
Confidence 998 89999888 4466 8899999998763225677777777766543 245 46788
Q ss_pred EEec--CCCCCCCchHHHHHHHHHHHh
Q 010344 480 KIVL--EFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 480 ~~~~--~iP~t~~GKi~r~~l~~~~~~ 504 (512)
++++ +||+|++|||+|++|++++.+
T Consensus 588 ~~v~~~~lP~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 588 LLVPAGSIPRTSSGKIARRACRAAYLD 614 (631)
T ss_pred EEECCCccccCCCcHHHHHHHHHHHHc
Confidence 8886 799999999999999998764
No 50
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-60 Score=486.90 Aligned_cols=449 Identities=20% Similarity=0.234 Sum_probs=359.9
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++.....
T Consensus 31 ~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~--- 107 (488)
T PRK09088 31 LVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAG--- 107 (488)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhcc---
Confidence 478999999998 9999999999999999999999999999999999999999999999999999999998743100
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
. .....++++...... . ..........+++++++|||||||.||+|++
T Consensus 108 -------------~----------------~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~ 155 (488)
T PRK09088 108 -------------R----------------TDVEDLAAFIASADA--L-EPADTPSIPPERVSLILFTSGTSGQPKGVML 155 (488)
T ss_pred -------------c----------------ccccchhhhhhhccc--c-ccccCCCCCCCCceEEEeCCCCCCCCcEEEE
Confidence 0 001122222221111 0 0111122356789999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHH--hcCceEEecch
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQ--DSGVSVLGTVP 237 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~--~~~~t~l~~~P 237 (512)
+|+++...............+|++++..|++|.+++.. ++.++..|+++++.+ ...+..++..+. ++++|+++++|
T Consensus 156 s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~P 234 (488)
T PRK09088 156 SERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSN-GFEPKRTLGRLGDPALGITHYFCVP 234 (488)
T ss_pred ehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcC-CCCHHHHHHHHHhhccCCcEEeeHH
Confidence 99999877766665667788999999999999999875 777888899988865 566778888875 48999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC--CCCccccccccc
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML--QPQAFGAFSTAT 315 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~--~~~~~~~~G~p~ 315 (512)
.++..+.........+++++|.+++||++++....+.+.+. ++++++.||+||++.++...... .....+++|.|.
T Consensus 235 ~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~ 312 (488)
T PRK09088 235 QMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPT 312 (488)
T ss_pred HHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCccccCC
Confidence 99999887654445567899999999999998887777654 68899999999998754322111 123457899999
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEec
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGR 394 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR 394 (512)
++++++|+|+++++++.|+ .|||++ ++....+| +.+++.+...+ .+++||+|||+|+++++|++++.||
T Consensus 313 ~~~~~~i~d~~~~~~~~g~--~Gel~v~~~~~~~gY--~~~~~~~~~~~------~~~g~~~TGDl~~~~~~g~l~i~GR 382 (488)
T PRK09088 313 PTVQTRVVDDQGNDCPAGV--PGELLLRGPNLSPGY--WRRPQATARAF------TGDGWFRTGDIARRDADGFFWVVDR 382 (488)
T ss_pred CCcEEEEECCCCCCCcCCC--ceEEEEECCccchhh--cCChhhhhhhh------cCCCCeeecceEEEcCCCcEEEecc
Confidence 9999999999999999998 699999 55443321 11222222222 3468999999999999999999999
Q ss_pred cCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcc
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLF 474 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 474 (512)
.+|+|+.+|.+|+|.+||++|. .+|.|.+++|++.+++..+ +..+++|+++++.. .+.+++. +++++++++|+
T Consensus 383 ~~d~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~-~~~~~l~----~~~~~~l~~~~ 455 (488)
T PRK09088 383 KKDMFISGGENVYPAEIEAVLA-DHPGIRECAVVGMADAQWG-EVGYLAIVPADGAP-LDLERIR----SHLSTRLAKYK 455 (488)
T ss_pred ccceEEeCCEEECHHHHHHHHH-hCCCcceEEEEeCCCccCC-ceeEEEEEECCCCC-CCHHHHH----HHHHhhCcCCC
Confidence 9999999999999999999998 8999999999999987777 78889998876544 4544444 44556788999
Q ss_pred ceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 475 KVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 475 ~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
+|..|.++++||+|++||++|++|++++.+.
T Consensus 456 ~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 456 VPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred CCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 9999999999999999999999999998764
No 51
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-60 Score=489.77 Aligned_cols=471 Identities=19% Similarity=0.208 Sum_probs=371.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++.+++++++++....
T Consensus 48 ~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~----- 122 (542)
T PRK06018 48 RALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFV----- 122 (542)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCC-c-eEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVAEAGPL-K-AVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
+.+..+....+. . .+++. ..........+....|.++...... .........+++++++|||||||.||+|
T Consensus 123 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PKgv 195 (542)
T PRK06018 123 -PILEKIADKLPSVERYVVLT-DAAHMPQTTLKNAVAYEEWIAEADG-----DFAWKTFDENTAAGMCYTSGTTGDPKGV 195 (542)
T ss_pred -HHHHHHHhhCCCccEEEEec-ccccccccCccccccHHHHhccCCc-----ccCcccCCccceeeEEecCCCCCCCcEE
Confidence 333333332221 1 22221 1111111111233456666554322 1112234567899999999999999999
Q ss_pred EecCchhH-HHH-HHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 159 PWTQLSPI-RCA-AEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 159 ~~s~~~~~-~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
++||++.+ ... ......+++..+|+++...|++|.+++...+.++..|+++++.....++..+++.++++++|++.++
T Consensus 196 ~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~ 275 (542)
T PRK06018 196 LYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGV 275 (542)
T ss_pred EEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecC
Confidence 99999743 222 2233456788999999999999999887777889999999886555677899999999999999999
Q ss_pred hHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCC----------C
Q 010344 237 PSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQP----------Q 306 (512)
Q Consensus 237 P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~----------~ 306 (512)
|+++..|.+.......+++++|.++++|+++++++.+.+++ + +.++++.||+||++.+.+.+..... .
T Consensus 276 p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~ 353 (542)
T PRK06018 276 PTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLD 353 (542)
T ss_pred cHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCCeEeeecccccCcccccccCccccccCCchhhhh
Confidence 99999998776555667889999999999999999999988 5 7899999999999876544321111 1
Q ss_pred cccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeC
Q 010344 307 AFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTV 385 (512)
Q Consensus 307 ~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~ 385 (512)
...++|.|.++++++|+|+++.+++.+....|||++ ++....+ |.+.+ ... .+.++||+|||++++++
T Consensus 354 ~~~~~G~~~~g~~i~v~d~~~~~~~~~~~~~Gel~i~g~~~~~g---y~~~~--~~~------~~~~~~~~TGDl~~~~~ 422 (542)
T PRK06018 354 VLQKQGYPPFGVEMKITDDAGKELPWDGKTFGRLKVRGPAVAAA---YYRVD--GEI------LDDDGFFDTGDVATIDA 422 (542)
T ss_pred ccccCCCCCCCcEEEEECCCCCCCCCCCCceeEEEEecCCcchh---hhcCc--ccE------ecCCcEEEcCCEEEEcC
Confidence 135789999999999999999988764222699999 4444332 22211 111 24568999999999999
Q ss_pred CCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHH
Q 010344 386 GGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKA 465 (512)
Q Consensus 386 ~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~ 465 (512)
+|++++.||.+|+++.+|++|+|.+||+++. ++|+|.+++|++.+++..+ +.+.++|++.++.. .+.+++.++++
T Consensus 423 ~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~~~-- 497 (542)
T PRK06018 423 YGYMRITDRSKDVIKSGGEWISSIDLENLAV-GHPKVAEAAVIGVYHPKWD-ERPLLIVQLKPGET-ATREEILKYMD-- 497 (542)
T ss_pred CccEEEEecCCCeEEECCEEECHHHHHHHHH-hCCcceeEEEEeccCCCcC-ceeEEEEEeCCCCC-CCHHHHHHHHH--
Confidence 9999999999999999999999999999998 8999999999999988777 78899998877654 55555555554
Q ss_pred HHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 466 IQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 466 ~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+++++|+.|..|+++++||+|++||++|++|++++.+
T Consensus 498 --~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 498 --GKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKD 534 (542)
T ss_pred --hhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 6788899999999999999999999999999999976
No 52
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-60 Score=495.51 Aligned_cols=483 Identities=16% Similarity=0.148 Sum_probs=375.0
Q ss_pred cHHHHHHHHhc-c-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCc
Q 010344 2 SYRLVANALDT-M-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 79 (512)
Q Consensus 2 ~~~~~a~~L~~-~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~ 79 (512)
.++++|++|.+ . +++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++|+++..
T Consensus 47 ~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~----- 121 (576)
T PRK05620 47 RAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRL----- 121 (576)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhh-----
Confidence 36889999986 6 9999999999999999999999999999999999999999999999999999999998742
Q ss_pred cccchhhHHhcCCCceEEeeccCCcc-----cccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 80 KFPLYSKVAEAGPLKAVVLPVIGDDV-----GIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
...+..+....+....++....... .........+|.++.+.... ........++++++++|||||||.
T Consensus 122 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~ 195 (576)
T PRK05620 122 -AEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGRST-----VYDWPELDETTAAAICYSTGTTGA 195 (576)
T ss_pred -HHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhcCCC-----cCCCCCCCccceeEEEECCCCCCC
Confidence 2333333333322211211111100 00111234467777753221 112233467889999999999999
Q ss_pred CceEEecCchhHHHHHHh--hccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceE
Q 010344 155 PKAIPWTQLSPIRCAAEA--WGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSV 232 (512)
Q Consensus 155 pK~v~~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~ 232 (512)
||+|+++|+++..+.... ...+++..++++++.+|++|.+++...+.++..|+++++.+...++..+++.++++++|+
T Consensus 196 PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~ 275 (576)
T PRK05620 196 PKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRV 275 (576)
T ss_pred CceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCce
Confidence 999999999986554432 234678899999999999999998888899999999998776678899999999999999
Q ss_pred EecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-------C
Q 010344 233 LGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ-------P 305 (512)
Q Consensus 233 l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~-------~ 305 (512)
++++|+++..++........+..++|.+++||+++++.+.+.+.+.+ ++++++.||+||++.......... .
T Consensus 276 ~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 354 (576)
T PRK05620 276 AHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY-GVDVVHVWGMTETSPVGTVARPPSGVSGEARW 354 (576)
T ss_pred eeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-CCceeeeccccccccceeeeccCCcccccccc
Confidence 99999999988765433334456899999999999999999998877 688999999999987544322211 0
Q ss_pred CcccccccccCCccEEEeCCCCCCCC--CCCCccccccc-ccccccccccccccCcc----eeEEecCCc------ccCc
Q 010344 306 QAFGAFSTATMTTGFVILDELGVPYP--DDQPCVGEVGL-FPLYLGATDRLLNADHE----EVYFSGMPI------YKGM 372 (512)
Q Consensus 306 ~~~~~~G~p~~~~~~~i~d~~~~~~~--~g~~~~Gel~v-~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~ 372 (512)
....++|++.++++++++|+ +.+++ .+. .|||++ ++....+| +.+++.+ ...|..+++ ...+
T Consensus 355 ~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~~--~Gel~v~g~~~~~gY--~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~ 429 (576)
T PRK05620 355 AYRVSQGRFPASLEYRIVND-GQVMESTDRN--EGEIQVRGNWVTASY--YHSPTEEGGGAASTFRGEDVEDANDRFTAD 429 (576)
T ss_pred ccccccCCcCCceeEEEecC-CccccCCCCC--ceEEEEEcCcccccc--cCCccccccccccccccccchhhhcccccC
Confidence 12347899999999999997 76664 344 699999 44444332 2233333 333433221 2346
Q ss_pred eeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCC
Q 010344 373 HLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTS 452 (512)
Q Consensus 373 ~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~ 452 (512)
+||+|||++++++||.+++.||.+|+|+.+|++|+|.+||++|. +||.|.+++|++.+++..+ +.+++++++.++..
T Consensus 430 g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~-~~p~v~~~~vv~~~~~~~g-~~~~a~v~~~~~~~- 506 (576)
T PRK05620 430 GWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIM-AAPEVVECAVIGYPDDKWG-ERPLAVTVLAPGIE- 506 (576)
T ss_pred CcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHh-cCCCceEEEEEeccCCCcC-ceeEEEEEecCCCC-
Confidence 79999999999999999999999999999999999999999998 8999999999999998888 78899998876543
Q ss_pred CcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 453 QPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 453 ~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
.+ +...+.++++++++|++|+.|+.|+++++||+|.+||++|++|++++++.
T Consensus 507 ~~-~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 507 PT-RETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHLADG 558 (576)
T ss_pred cc-cccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHHHHHhcC
Confidence 21 12245666677789999999999999999999999999999999999853
No 53
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.5e-61 Score=548.94 Aligned_cols=482 Identities=16% Similarity=0.121 Sum_probs=368.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++++++++++++.... ..
T Consensus 279 ~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~---~~ 355 (1389)
T TIGR03443 279 ASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAG---TL 355 (1389)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEecccc---cc
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999876321 00
Q ss_pred ccchhhHHhcCC-----CceEEeeccCCcccccccccCc--cHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010344 81 FPLYSKVAEAGP-----LKAVVLPVIGDDVGIQLRQQDV--SWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTG 153 (512)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 153 (512)
...+........ .....+..... ...+.. ...++...... ...........++++++++|||||||
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ii~TSGSTG 428 (1389)
T TIGR03443 356 DQLVRDYIDKELELRTEIPALALQDDGS-----LVGGSLEGGETDVLAPYQA--LKDTPTGVVVGPDSNPTLSFTSGSEG 428 (1389)
T ss_pred chhhhhhhhcccccccccceEEeccccc-----ccccccccccccccccccc--cccCCCCCcCCCCCceEEEECCCCCC
Confidence 011111111000 00011110000 000000 00011100000 00011112245788999999999999
Q ss_pred CCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCC--chhhHHHHHHhcCce
Q 010344 154 EPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSP--LERSFGKFVQDSGVS 231 (512)
Q Consensus 154 ~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~--~~~~~~~~l~~~~~t 231 (512)
.||||+++|+++.+.+.+....+++.++|+++...|++|..++..++.+|+.|+++++.+... ++..+++.|+++++|
T Consensus 429 ~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt 508 (1389)
T TIGR03443 429 IPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGAT 508 (1389)
T ss_pred CCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCe
Confidence 999999999999998888877888999999999999999999888999999999999976432 467899999999999
Q ss_pred EEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-------
Q 010344 232 VLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ------- 304 (512)
Q Consensus 232 ~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~------- 304 (512)
+++++|+++..|.... ...++++|.+++|||++++...+.+.+..+++++++.||+||++...+......
T Consensus 509 ~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~ 585 (1389)
T TIGR03443 509 VTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTF 585 (1389)
T ss_pred EEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccch
Confidence 9999999999887542 345789999999999999999998888777889999999999986544322110
Q ss_pred ---CCcccccccccCCccEEEeCCC--CCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCc----------
Q 010344 305 ---PQAFGAFSTATMTTGFVILDEL--GVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPI---------- 368 (512)
Q Consensus 305 ---~~~~~~~G~p~~~~~~~i~d~~--~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 368 (512)
.....++|.|+++++++|+|++ +++++.|+ .|||+| ++....+| +.+++.+...|..+++
T Consensus 586 ~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~--~GEL~i~G~~v~~GY--~~~p~~t~~~f~~~~~~~~~~~~~~~ 661 (1389)
T TIGR03443 586 LKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGE--VGEIYVRAGGLAEGY--LGLPELNAEKFVNNWFVDPSHWIDLD 661 (1389)
T ss_pred hhcccCcCcCCCccCCCEEEEECCccCCCcCCCCC--ceEEEecccccchhc--CCChhHhhhhccCCcccCcccccccc
Confidence 0123578999999999999954 57899999 699999 66655432 3355555555543321
Q ss_pred ------------ccCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCC
Q 010344 369 ------------YKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGG 436 (512)
Q Consensus 369 ------------~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~ 436 (512)
..+++||+|||+|++++||+++|+||.||+||++|++|+|.|||++|. +||.|.+++|+..++...+
T Consensus 662 ~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~-~~p~V~~a~v~~~~~~~~~ 740 (1389)
T TIGR03443 662 KENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLS-QHPLVRENVTLVRRDKDEE 740 (1389)
T ss_pred cccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHH-hCcchheeEEEEeeCCCCC
Confidence 134689999999999999999999999999999999999999999998 8999999999988877666
Q ss_pred CceEEEEEEecCCCCCCc---------------------HHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHH
Q 010344 437 PEVLVICVVLKKGFTSQP---------------------VDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLR 495 (512)
Q Consensus 437 ~~~~~a~v~~~~~~~~~~---------------------~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r 495 (512)
+.+++++++..+..... ..+..+.++++++++|+.|++|..|+++++||+|++||++|
T Consensus 741 -~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr 819 (1389)
T TIGR03443 741 -PTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDK 819 (1389)
T ss_pred -eEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccH
Confidence 78999999763211000 11235677888889999999999999999999999999999
Q ss_pred HHHHHHH
Q 010344 496 RVLKDQL 502 (512)
Q Consensus 496 ~~l~~~~ 502 (512)
++|++.+
T Consensus 820 ~~L~~~~ 826 (1389)
T TIGR03443 820 PALPFPD 826 (1389)
T ss_pred hhcCCCc
Confidence 9997543
No 54
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.6e-61 Score=506.99 Aligned_cols=483 Identities=16% Similarity=0.124 Sum_probs=357.5
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
++++|++|.+. +++||+|+|+++|++||+++++||+++|++++|+++.++.+++.++|++++++++|++....
T Consensus 116 v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~------ 189 (696)
T PLN02387 116 VCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL------ 189 (696)
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH------
Confidence 68999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred cchhhHHhcCCCceEEeeccCCcccc------cccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGI------QLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~p 155 (512)
..+..+....+....++......... .......+|.++...+... . .......++|+++|+|||||||.|
T Consensus 190 ~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~dd~a~I~yTSGTTG~P 265 (696)
T PLN02387 190 KKLIDISSQLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKEN--P--VDPDLPSPNDIAVIMYTSGSTGLP 265 (696)
T ss_pred HHHHHHhhccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccC--C--CCCCCCCccceEEEEecCCCCCCC
Confidence 23333333333222222211111000 0011224577766544321 1 112234578999999999999999
Q ss_pred ceEEecCchhHHHHHHhhccc-cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCc-------hhhHHHHHHh
Q 010344 156 KAIPWTQLSPIRCAAEAWGHI-DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPL-------ERSFGKFVQD 227 (512)
Q Consensus 156 K~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~-------~~~~~~~l~~ 227 (512)
|||++||+++.+++......+ ++.++|++++++|++|.+++...+..+..|+++.+...... +..++..+++
T Consensus 266 KGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~ 345 (696)
T PLN02387 266 KGVMMTHGNIVATVAGVMTVVPKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASA 345 (696)
T ss_pred CEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHH
Confidence 999999999998877665443 57889999999999999998776666777877766332111 2345678999
Q ss_pred cCceEEecchHHHHHHHccCCCC-------------------------------C----------------CCcCceeEE
Q 010344 228 SGVSVLGTVPSLVKAWKNTNCLQ-------------------------------G----------------LDWTKIRSF 260 (512)
Q Consensus 228 ~~~t~l~~~P~~~~~l~~~~~~~-------------------------------~----------------~~l~~l~~i 260 (512)
++||++.++|.++..+.+..... . ...+++|.+
T Consensus 346 ~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i 425 (696)
T PLN02387 346 LKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFM 425 (696)
T ss_pred hCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEE
Confidence 99999999999999886421000 0 001589999
Q ss_pred EeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeC-CCCCCC---CCCCCc
Q 010344 261 ASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILD-ELGVPY---PDDQPC 336 (512)
Q Consensus 261 ~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~---~~g~~~ 336 (512)
++||+++++++.+.+...+ +++++++||+||+++..+.... .....+++|.|+++++++|+| +++... .++.
T Consensus 426 ~~GGapl~~~~~~~~~~~~-g~~v~~~YG~TEt~~~~~~~~~-~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p-- 501 (696)
T PLN02387 426 LSGGAPLSGDTQRFINICL-GAPIGQGYGLTETCAGATFSEW-DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMP-- 501 (696)
T ss_pred EEcCCCCCHHHHHHHHHHc-CCCeeEeechhhcccceeecCc-ccCCCCccCCCCCceEEEEeeccccCcccCCCCCC--
Confidence 9999999999988877666 7899999999999865544333 234568999999999999998 544322 2223
Q ss_pred cccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceeee-cceecchHHHHHh
Q 010344 337 VGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERV 414 (512)
Q Consensus 337 ~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~-~G~~v~~~~iE~~ 414 (512)
.|||++ ++..+.+| +.+++.+...|..+ .+|.+||+|||+|++|+||+++|+||.||+||. +|++|+|.+||++
T Consensus 502 ~GEi~vrGp~v~~GY--~~~pe~T~~~f~~d--~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~ 577 (696)
T PLN02387 502 RGEIVIGGPSVTLGY--FKNQEKTDEVYKVD--ERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAA 577 (696)
T ss_pred CceEEeccCcccchh--cCCHHHHhhhhccc--cCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHH
Confidence 499999 56555432 33555555544321 134469999999999999999999999999996 7999999999999
Q ss_pred hhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCC----------C--C----CcHHHHHHHHHHHH-----HhccCCc
Q 010344 415 CDGADESILETAAISVSPAGGGPEVLVICVVLKKGF----------T--S----QPVDKLKMIFSKAI-----QRNLNPL 473 (512)
Q Consensus 415 l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~----------~--~----~~~~~l~~~~~~~~-----~~~l~~~ 473 (512)
|. +||.|.+++|++.+.. ..++|+|++.++. . . .+..++.+.+.+.+ +++|..|
T Consensus 578 l~-~~p~V~~~~V~g~~~~----~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 652 (696)
T PLN02387 578 LS-VSPYVDNIMVHADPFH----SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKF 652 (696)
T ss_pred Hh-cCCCeeEEEEEecCCc----ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCc
Confidence 98 8999999999987632 5788899886421 0 0 01223344444443 3479999
Q ss_pred cceeeEEEecCCC------CCCCchHHHHHHHHHHHhhhhc
Q 010344 474 FKVSLVKIVLEFP------RTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 474 ~~p~~i~~~~~iP------~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
.+|+.|.++++-. .|++.|+.|+.+++.|++++++
T Consensus 653 e~~~~i~l~~~~~t~~~g~lT~t~K~~R~~i~~~y~~~i~~ 693 (696)
T PLN02387 653 EIPAKIKLLPEPWTPESGLVTAALKLKREQIRKKFKDDLKK 693 (696)
T ss_pred ceeeEEEEECCCCCCCCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 9999999987633 6888899999999999999875
No 55
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-60 Score=491.22 Aligned_cols=470 Identities=19% Similarity=0.199 Sum_probs=384.5
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++.+++++++++....
T Consensus 40 ~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~----- 114 (521)
T PRK06187 40 RVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFV----- 114 (521)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999998532
Q ss_pred ccchhhHHhcCCC--ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVAEAGPL--KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
..+..+.+..+. +.+++..... . ........+.+++..... .........+++++++|||||||.||+|
T Consensus 115 -~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~PK~v 185 (521)
T PRK06187 115 -PLLAAILPQLPTVRTVIVEGDGPA--A-PLAPEVGEYEELLAAASD-----TFDFPDIDENDAAAMLYTSGTTGHPKGV 185 (521)
T ss_pred -HHHHHHhhccCCccEEEEecCccc--c-ccccccccHHHHhhcCCc-----cCCCCCCCccceEEEEECCCCCCCCceE
Confidence 333444433332 2222221110 0 122344567776654332 1122334567899999999999999999
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
.+||.++..........+++.++|++++..|++|.+++...+.++..|+++++.+.. ++..+++.++++++|.++++|+
T Consensus 186 ~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~p~ 264 (521)
T PRK06187 186 VLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFAVPT 264 (521)
T ss_pred EeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEchHH
Confidence 999999998888877788999999999999999999988766799999999998754 8899999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCC-----Cccccccc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQP-----QAFGAFST 313 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~-----~~~~~~G~ 313 (512)
++..|.+.......+++++|.+++|||++++++.+++.+.+ ++++++.||+||++++......... ....++|.
T Consensus 265 ~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~ 343 (521)
T PRK06187 265 IWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGR 343 (521)
T ss_pred HHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-CcchheeeccCccCcccccCCcccccccccccCCcccc
Confidence 99999988766667889999999999999999999999888 8899999999999876554433222 25678999
Q ss_pred ccCCccEEEeCCCCCCCCC--CCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEE
Q 010344 314 ATMTTGFVILDELGVPYPD--DQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYII 390 (512)
Q Consensus 314 p~~~~~~~i~d~~~~~~~~--g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~ 390 (512)
|.+++.++|+|+++.+++. |+ .|||++ ++....++ +.+++.+...|. ++||+|||+++++++|+++
T Consensus 344 ~~~~~~~~i~~~~~~~~~~~~g~--~Gel~v~~~~~~~~y--~~~~~~~~~~~~-------~~~~~tGD~~~~~~~g~~~ 412 (521)
T PRK06187 344 PLPGVEARIVDDDGDELPPDGGE--VGEIIVRGPWLMQGY--WNRPEATAETID-------GGWLHTGDVGYIDEDGYLY 412 (521)
T ss_pred ccCCeEEEEECCCCCCCCCCCCC--eeEEEEECcchhhhh--cCCHHHHHHHhh-------CCceeccceEEEcCCCCEE
Confidence 9999999999999999998 87 699999 44333221 222222222221 2499999999999999999
Q ss_pred EEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhcc
Q 010344 391 VQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNL 470 (512)
Q Consensus 391 i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l 470 (512)
+.||.+|+++.+|.+++|.+||++|. .+++|.+++|++.+++..+ +.+.+++++.++.. .+.+++.+++ +++|
T Consensus 413 ~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~l----~~~l 485 (521)
T PRK06187 413 ITDRIKDVIISGGENIYPRELEDALY-GHPAVAEVAVIGVPDEKWG-ERPVAVVVLKPGAT-LDAKELRAFL----RGRL 485 (521)
T ss_pred EeecccceEEcCCeEECHHHHHHHHH-hCCCceEEEEEeccCCCcC-ceEEEEEEECCCCC-CCHHHHHHHH----HHhc
Confidence 99999999999999999999999998 8999999999999887777 89999999877654 5555555554 5678
Q ss_pred CCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 471 NPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 471 ~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
+++++|..|+++++||+|++||++|+.|++++++.
T Consensus 486 ~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 486 AKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred cCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 88999999999999999999999999999998763
No 56
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-60 Score=490.85 Aligned_cols=468 Identities=19% Similarity=0.200 Sum_probs=360.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++......
T Consensus 52 ~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~--- 128 (534)
T PRK05852 52 LVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHD--- 128 (534)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcch---
Confidence 368999999999 9999999999999999999999999999999999999999999999999999999998632100
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
......... .....+...... ....... ........ ...........+++++++|||||||.||+|++
T Consensus 129 --~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~ 196 (534)
T PRK05852 129 --RAEPTTRWW-PLTVNVGGDSGP-----SGGTLSV-HLDAATEP---TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPW 196 (534)
T ss_pred --hcccccccc-ceeeeecccccc-----ccccccc-ccccccCC---CccccccCCCCCCceEEEeCCCCCCCCcEEEe
Confidence 000000000 011111100000 0000000 00000000 00001111224678999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecC-CCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHG-SPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|.++...+......+++..+|++++..|++|.+++.. ++.+++.|+++++... ..++..+++.++++++|.++++|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~ 276 (534)
T PRK05852 197 THANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPT 276 (534)
T ss_pred cHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChH
Confidence 99999988888777788899999999999999999865 7888888988887442 346789999999999999999999
Q ss_pred HHHHHHccCCCC--CCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC----CC---Cccc
Q 010344 239 LVKAWKNTNCLQ--GLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML----QP---QAFG 309 (512)
Q Consensus 239 ~~~~l~~~~~~~--~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~----~~---~~~~ 309 (512)
++..|.+..... ..+.+++|.+.++|+++++.+.+.+.+.+ +.++++.||+||++......... .. ...+
T Consensus 277 ~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g 355 (534)
T PRK05852 277 IHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTG 355 (534)
T ss_pred HHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCccccccccCcccccc
Confidence 999998764322 34567999999999999999999999888 68899999999998765433221 11 1223
Q ss_pred ccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCe
Q 010344 310 AFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGY 388 (512)
Q Consensus 310 ~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 388 (512)
..|. .++++++|+|++|++++.|+ .|||++ ++..+.+| +.+++.+...| .++||+|||+|++|+||+
T Consensus 356 ~~g~-~~g~~~~i~d~~g~~~~~g~--~Gel~v~g~~v~~gY--~~~~~~t~~~~-------~~g~~~TGD~~~~d~dG~ 423 (534)
T PRK05852 356 LVGR-STGAQIRIVGSDGLPLPAGA--VGEVWLRGTTVVRGY--LGDPTITAANF-------TDGWLRTGDLGSLSAAGD 423 (534)
T ss_pred cCCC-CCCCeEEEECCCCCCCCCCC--ceEEEEecCcccchh--cCCcccchhhh-------cCCCcccCceEEEeCCCc
Confidence 3444 68999999999999999999 699999 55444332 22333333222 246999999999999999
Q ss_pred EEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHh
Q 010344 389 IIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQR 468 (512)
Q Consensus 389 l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~ 468 (512)
+++.||.+|+|+.+|.+|+|.+||+++. ++|+|.+++|++.+++..+ +.+.++|+..++.. .+.+++.+++ ++
T Consensus 424 l~~~gR~~d~i~~~G~~v~~~~iE~~l~-~~~~V~~~~v~g~~~~~~g-~~~~~~vv~~~~~~-~~~~~i~~~~----~~ 496 (534)
T PRK05852 424 LSIRGRIKELINRGGEKISPERVEGVLA-SHPNVMEAAVFGVPDQLYG-EAVAAVIVPRESAP-PTAEELVQFC----RE 496 (534)
T ss_pred EEEEecchhhEEECCEEECHHHHHHHHH-hCCCeeeEEEEecCCcCcC-ceEEEEEEECCCCC-CCHHHHHHHH----HH
Confidence 9999999999999999999999999998 8999999999999988877 88999998866543 5555555555 56
Q ss_pred ccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 469 NLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 469 ~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+|++|++|..|+++++||+|++||++|++|++++..
T Consensus 497 ~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 497 RLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred hcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 788999999999999999999999999999998864
No 57
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.4e-60 Score=488.22 Aligned_cols=459 Identities=17% Similarity=0.175 Sum_probs=370.9
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.+.++|+.|.+. +++||+|+++++|+.++++++|||+++|++++|+++.++.+++.++++..++++++++.....
T Consensus 34 ~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~---- 109 (502)
T TIGR01734 34 QSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSI---- 109 (502)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccc----
Confidence 368899999999 999999999999999999999999999999999999999999999999999999999874210
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
... ....+.+. ...++...... ........++++++++|||||||.||+|++
T Consensus 110 --~~~------~~~~~~~~---------------~~~~~~~~~~~-----~~~~~~~~~~~~~~il~TSGTTG~PK~v~~ 161 (502)
T TIGR01734 110 --DAV------GTQIITLS---------------ALEQAETSGGP-----VSFDHAVKGDDNYYIIYTSGSTGNPKGVQI 161 (502)
T ss_pred --ccc------CCceEEch---------------HhhhhhhhcCC-----ccccccCCCCCeEEEEECCCCCCCCCEEEE
Confidence 000 00011110 01111111110 011122356789999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC--CchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS--PLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|.++.....+....++...++++++..|++|..++..++.++..|+++++.+.. .++..+++.++++++|.+.++|+
T Consensus 162 s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~ 241 (502)
T TIGR01734 162 SHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPS 241 (502)
T ss_pred ecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChh
Confidence 9999998888877778888999999999999999998899999999999998753 35788999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC----CCCCcccccccc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM----LQPQAFGAFSTA 314 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~----~~~~~~~~~G~p 314 (512)
++..++........++++++.++++|+++++++.+.+.+.++++++++.||+||++..+..... .......++|.|
T Consensus 242 ~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~ 321 (502)
T TIGR01734 242 FVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFA 321 (502)
T ss_pred HHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccc
Confidence 9987766544455677899999999999999999999999888999999999999865443221 112234579999
Q ss_pred cCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEe
Q 010344 315 TMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQG 393 (512)
Q Consensus 315 ~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~g 393 (512)
.++++++|+|+++.+++.|+ .|||++ ++..+.+|. .+++.+...|.. ..+.+||+|||+|+++++ +++++|
T Consensus 322 ~~~~~~~i~~~~~~~~~~g~--~Gel~v~g~~~~~gy~--~~~~~~~~~~~~---~~~~~~~~TGDlg~~~~~-~l~i~G 393 (502)
T TIGR01734 322 KPDMNLFIMDEEGEPLPEGE--KGEIVIVGPSVSKGYL--NNPEKTAEAFFS---HEGQPAYRTGDAGTITDG-QLFYQG 393 (502)
T ss_pred cCCCEEEEECCCCCCCCCCC--eeEEEEcccccccccc--CCcccchHhhee---CCCcEEEECCCEEEEECC-EEEEec
Confidence 99999999999999999998 799999 554444322 233333222211 245679999999999977 999999
Q ss_pred ccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeC-CCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCC
Q 010344 394 RADDTMNLGGIKTSSVEIERVCDGADESILETAAISVS-PAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNP 472 (512)
Q Consensus 394 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~-~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 472 (512)
|.+|+|+++|++|+|.+||+.+. ++|.|.++++++.. +...+ +.++++|+..+... ....++.+.+++.++++|++
T Consensus 394 R~~d~i~~~G~~v~~~~IE~~l~-~~~~v~~~~vv~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~~~~~i~~~~~~~l~~ 470 (502)
T TIGR01734 394 RLDFQIKLHGYRIELEDIEFNLR-QSSYIESAVVVPKYNKDHKV-EYLIAAIVPETEDF-EKEFQLTKAIKKELKKSLPA 470 (502)
T ss_pred cccCeEEECcEEeCHHHHHHHHH-cCCCccEEEEEEEEcCCCCc-eEEEEEEEeccccc-ccchhhHHHHHHHHhhhChh
Confidence 99999999999999999999998 89999999999865 33344 78999998876543 44556767888888899999
Q ss_pred ccceeeEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 473 LFKVSLVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 473 ~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
|++|..+++++++|+|++||++|++|++++.
T Consensus 471 ~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 471 YMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred hcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 9999999999999999999999999999875
No 58
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2.2e-60 Score=489.34 Aligned_cols=464 Identities=18% Similarity=0.189 Sum_probs=364.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++++++++++++....
T Consensus 55 ~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~----- 129 (542)
T PRK06155 55 AAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALL----- 129 (542)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhH-----
Confidence 378999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcC-C-CceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVAEAG-P-LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
+.+....... . ...+.++.... .. ....|.... .... ..........++++++++|||||||.||+|
T Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~-~~~~---~~~~~~~~~~~~~~a~il~TSGTTG~PK~V 198 (542)
T PRK06155 130 -AALEAADPGDLPLPAVWLLDAPAS---VS---VPAGWSTAP-LPPL---DAPAPAAAVQPGDTAAILYTSGTTGPSKGV 198 (542)
T ss_pred -HHHHHhcccccCcceEEEecCccc---cc---cccccchhh-hccc---CCCCCCCCCCCCCeEEEEECCCCCCCCcEE
Confidence 1222211111 1 11222211100 00 001111100 0000 011112234568899999999999999999
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+++|.++..........+++.+++++++..|++|..++..++.+++.|+++++.+ ..++..+++.|+++++|+++++|+
T Consensus 199 ~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 277 (542)
T PRK06155 199 CCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP-RFSASGFWPAVRRHGATVTYLLGA 277 (542)
T ss_pred EEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC-CCCHHHHHHHHHHhCCcEEEchHH
Confidence 9999999887777777788999999999999999999888899999999999865 567899999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
++..|.+.........++++.++.+| +++.+.+.+++.+ +.++++.||+||++..+.... .....+.+|.|.+++
T Consensus 278 ~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~--~~~~~~~vG~~~~~~ 352 (542)
T PRK06155 278 MVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTETNFVIAVTH--GSQRPGSMGRLAPGF 352 (542)
T ss_pred HHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccccCccccCCC--CCCCCCCcCccCCCc
Confidence 99999887655556677899887666 4678888888777 789999999999987654432 234567899999999
Q ss_pred cEEEeCCCCCCCCCCCCcccccccccc-cccccccccc-cCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccC
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGLFPL-YLGATDRLLN-ADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD 396 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~ 396 (512)
+++|+|+++++++.|+ .|||+++.. ......+|.+ ++.+...| .++||+|||+|++++||+++++||.+
T Consensus 353 ~~~i~d~~~~~~~~g~--~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-------~~~~~~TGD~~~~~~dG~l~i~GR~~ 423 (542)
T PRK06155 353 EARVVDEHDQELPDGE--PGELLLRADEPFAFATGYFGMPEKTVEAW-------RNLWFHTGDRVVRDADGWFRFVDRIK 423 (542)
T ss_pred eEEEECCCCCCCCCCC--ceEEEEecCCccccchhhcCCHHHHHHhh-------cCCcEeccceEEEcCCceEEEEecCC
Confidence 9999999999999998 699999432 1111112222 22222222 25799999999999999999999999
Q ss_pred ceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce
Q 010344 397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV 476 (512)
Q Consensus 397 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 476 (512)
|+|+++|.+|+|.+||+++. ++|+|.+++|++++++..+ +.+.+++++.++.. .+..++.+++ .++|++|++|
T Consensus 424 d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~v~~~~~~-~~~~~~v~~~~~~~-~~~~~~~~~~----~~~l~~~~~P 496 (542)
T PRK06155 424 DAIRRRGENISSFEVEQVLL-SHPAVAAAAVFPVPSELGE-DEVMAAVVLRDGTA-LEPVALVRHC----EPRLAYFAVP 496 (542)
T ss_pred CEEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeecccccC-ceEEEEEEECCCCC-CCHHHHHHHH----HhhCcCccCC
Confidence 99999999999999999998 8999999999999987777 78888888876554 5665555555 5678899999
Q ss_pred eeEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 477 SLVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 477 ~~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
..|+++++||+|++||++|++|++++-
T Consensus 497 ~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 497 RYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred cEEEEeccCCCCcccceeHHHHHhhcc
Confidence 999999999999999999999998764
No 59
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-60 Score=490.39 Aligned_cols=467 Identities=19% Similarity=0.171 Sum_probs=367.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|++. +++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++++...
T Consensus 41 ~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 115 (528)
T PRK07470 41 RVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFP----- 115 (528)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhH-----
Confidence 368899999999 99999999999999999999999999999999999999999999999999999999997532
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.....+.+.......++..... ....++.+++..... .........++++++++|||||||.||+|++
T Consensus 116 -~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~ 183 (528)
T PRK07470 116 -EHAAAVRAASPDLTHVVAIGGA-------RAGLDYEALVARHLG----ARVANAAVDHDDPCWFFFTSGTTGRPKAAVL 183 (528)
T ss_pred -HHHHHHHhhCCcCceEEEeCCC-------cccccHHHHHhcCCC----CCCCcccCCCCCeEEEEeCCCCCCCCcEEEE
Confidence 2222222222221112211111 112356666543221 1112233456889999999999999999999
Q ss_pred cCchhHHHHHHhhcc--ccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC-CCchhhHHHHHHhcCceEEecch
Q 010344 161 TQLSPIRCAAEAWGH--IDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG-SPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 161 s~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
+|.++...+...... .+..++|+++..+|++|..++..++ .++.|+++++.+. ..+++.+++.++++++|++.++|
T Consensus 184 s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 262 (528)
T PRK07470 184 THGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVP 262 (528)
T ss_pred ehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechH
Confidence 999987654433222 2467889999999999999986654 5667777776653 45788999999999999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC-------CCCcccc
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML-------QPQAFGA 310 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-------~~~~~~~ 310 (512)
+++..+.+.......+++++|.+++||+++++...+.+.+.+ +.++++.||+||++..+...... .....++
T Consensus 263 ~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (528)
T PRK07470 263 TILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGT 341 (528)
T ss_pred HHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCcccCCceeecchhhccccccccceeec
Confidence 999999887655667788999999999999999988888777 67899999999998654432211 1224578
Q ss_pred cccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeE
Q 010344 311 FSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYI 389 (512)
Q Consensus 311 ~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l 389 (512)
+|.|+++++++++|+++++++.|+ .|||++ ++....+| +.+++.+...| .++||+|||+|+++++|++
T Consensus 342 ~G~~~~g~~~~i~d~~~~~~~~g~--~Gel~i~~~~~~~gy--~~~~~~~~~~~-------~~~~~~TGDl~~~~~~g~l 410 (528)
T PRK07470 342 CGFERTGMEVQIQDDEGRELPPGE--TGEICVIGPAVFAGY--YNNPEANAKAF-------RDGWFRTGDLGHLDARGFL 410 (528)
T ss_pred cCcccCCcEEEEECCCCCCCCCCC--ceEEEEeCCccchhh--cCCHHHHHhhh-------cCCcEecceeEEEccCCeE
Confidence 999999999999999999999999 699999 44433321 22222222222 2469999999999999999
Q ss_pred EEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhc
Q 010344 390 IVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRN 469 (512)
Q Consensus 390 ~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~ 469 (512)
++.||.||+++++|++|+|.+||+.+. .++.|.+++|++.+++..+ +.+.++++..++.. .+.+++.++ +.++
T Consensus 411 ~~~GR~dd~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~----l~~~ 483 (528)
T PRK07470 411 YITGRASDMYISGGSNVYPREIEEKLL-THPAVSEVAVLGVPDPVWG-EVGVAVCVARDGAP-VDEAELLAW----LDGK 483 (528)
T ss_pred EEeCCccceEEeCCEEECHHHHHHHHH-hCCCceEEEEEeccCcccC-ceeEEEEEECCCCC-CCHHHHHHH----HHHh
Confidence 999999999999999999999999998 8999999999999998777 78888888876544 555555554 5567
Q ss_pred cCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 470 LNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 470 l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
|++|++|..++++++||+|++||++|+.|++++.+.
T Consensus 484 l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 484 VARYKLPKRFFFWDALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred hhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhc
Confidence 789999999999999999999999999999988763
No 60
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.3e-60 Score=487.02 Aligned_cols=462 Identities=20% Similarity=0.215 Sum_probs=372.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|+++++++++||+++|++++|+++.++..++..+++.++++++++++...
T Consensus 37 ~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~----- 111 (504)
T PRK07514 37 ASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANF----- 111 (504)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchh-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCCc-eEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 81 FPLYSKVAEAGPLK-AVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
..+..+....... ...++.. ....+.+...... .........++++++++|||||||.||+|+
T Consensus 112 -~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~ 175 (504)
T PRK07514 112 -AWLSKIAAAAGAPHVETLDAD----------GTGSLLEAAAAAP-----DDFETVPRGADDLAAILYTSGTTGRSKGAM 175 (504)
T ss_pred -HHHHHhhhccCCceEEEecCC----------CcccHHHhhhhcC-----cccCcccCCCCCeEEEEECCCCCCCCcEEE
Confidence 2222222222211 1111110 1112222221111 111223345788999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
++|.++...+......+++.++|++++..|++|..++.. ++.+++.|+++++.+ ..++..+++.+. ++|++.++|.
T Consensus 176 ~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~--~~t~~~~~P~ 252 (504)
T PRK07514 176 LSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLP-KFDPDAVLALMP--RATVMMGVPT 252 (504)
T ss_pred EecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECC-CCCHHHHHHHHH--hheeeecHHH
Confidence 999999988877777788899999999999999998864 778999999999876 467888888884 7999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
++..++.........++++|.+++||+++++++.+.+.+.+ +.++++.||+||++..... .........++|.|++++
T Consensus 253 ~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~G~~~~~~ 330 (504)
T PRK07514 253 FYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMNTSN-PYDGERRAGTVGFPLPGV 330 (504)
T ss_pred HHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecccccccccccC-CccccccCcccccCCCCc
Confidence 99999887655666788999999999999999999999887 6789999999999865432 222233457899999999
Q ss_pred cEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccC
Q 010344 319 GFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD 396 (512)
Q Consensus 319 ~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~ 396 (512)
+++|+| +++++++.|+ .|||++ ++....++ +.+++.+...|. .++||+|||+++++++|++++.||.+
T Consensus 331 ~v~i~d~~~~~~~~~g~--~Gel~i~~~~~~~gy--~~~~~~~~~~~~------~~~~~~TGDl~~~~~~g~~~~~GR~~ 400 (504)
T PRK07514 331 SLRVTDPETGAELPPGE--IGMIEVKGPNVFKGY--WRMPEKTAEEFR------ADGFFITGDLGKIDERGYVHIVGRGK 400 (504)
T ss_pred EEEEEECCCCCCCCCCC--ceEEEEecCCccccc--cCCchhhhhhcc------cCCCeeecceEEEcCCccEEEecccc
Confidence 999999 8899999999 699999 55444322 223333333342 35699999999999999999999999
Q ss_pred ceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce
Q 010344 397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV 476 (512)
Q Consensus 397 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 476 (512)
|+|+++|.+|+|.+||+++. .+++|.+++|++.+++..+ +.++++++..++.. .+.+++.+ .++++|++|++|
T Consensus 401 ~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~l~~----~~~~~l~~~~~p 473 (504)
T PRK07514 401 DLIISGGYNVYPKEVEGEID-ELPGVVESAVIGVPHPDFG-EGVTAVVVPKPGAA-LDEAAILA----ALKGRLARFKQP 473 (504)
T ss_pred ceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEeCCCCCcC-ceEEEEEEECCCCC-CCHHHHHH----HHHhhcccCCCC
Confidence 99999999999999999998 8999999999999888777 78999999876544 45555544 455678899999
Q ss_pred eeEEEecCCCCCCCchHHHHHHHHHHHhhh
Q 010344 477 SLVKIVLEFPRTASNKLLRRVLKDQLKHEL 506 (512)
Q Consensus 477 ~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~ 506 (512)
..|++++++|+|++||++|++|++++++.+
T Consensus 474 ~~i~~v~~~p~t~~gK~~r~~l~~~~~~~~ 503 (504)
T PRK07514 474 KRVFFVDELPRNTMGKVQKNLLREQYADLF 503 (504)
T ss_pred cEEEEeccCCCCCCcceeHHHHHHHHHhhc
Confidence 999999999999999999999999988654
No 61
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.6e-60 Score=490.80 Aligned_cols=478 Identities=20% Similarity=0.233 Sum_probs=376.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|+++++++++||+++|++++|++|.++.+++..+++.++++++++++.... ...
T Consensus 58 ~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~-~~~ 136 (547)
T PRK06087 58 AASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQ-TRP 136 (547)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEeccccc-ccH
Confidence 378999999999 999999999999999999999999999999999999999999999999999999999864210 011
Q ss_pred ccchhhHHhcCCC--ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVAEAGPL--KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
.+.+..+...... ..+.+..... ......+.+++..... . ........+++++++|||||||.||+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~---~~~~~~~~~d~a~i~~TSGTTG~PK~v 205 (547)
T PRK06087 137 VDLILPLQNQLPQLQQIVGVDKLAP------ATSSLSLSQIIADYEP--L---TTAITTHGDELAAVLFTSGTEGLPKGV 205 (547)
T ss_pred HHHHHHHHhhCCCCcEEEEeCCcCC------CcCccCHHHHhccCCc--c---cCCCCCCCCCeEEEEeCCCCCCCCcEE
Confidence 1122222222222 1222211110 0122345555543221 0 112234578899999999999999999
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
+++|.++..+.......+++.+++++++..|++|.++++. ++.+++.|+++++.+ ..++..+++.++++++|+++++|
T Consensus 206 ~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~~ 284 (547)
T PRK06087 206 MLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD-IFTPDACLALLEQQRCTCMLGAT 284 (547)
T ss_pred EEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCCEEeccH
Confidence 9999999888877777778899999999999999999764 788889999999975 56789999999999999999988
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC-CCcccccccccC
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ-PQAFGAFSTATM 316 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~-~~~~~~~G~p~~ 316 (512)
+++..++........+++++|.+++||+++++++.+.+.+. ++++++.||+||++.......... ....+++|.|++
T Consensus 285 ~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~ 362 (547)
T PRK06087 285 PFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAA 362 (547)
T ss_pred HHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEEEecccccCCccccCCCcchhhcCCcCCccCC
Confidence 88887877655556678899999999999999998887653 789999999999987654432211 123457899999
Q ss_pred CccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEecc
Q 010344 317 TTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRA 395 (512)
Q Consensus 317 ~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~ 395 (512)
++.++++|+++.+++.|+ .||+++ ++..+.+| +.+++.+...+ ..++||+|||+++++++|+++++||.
T Consensus 363 ~~~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~gy--~~~~~~~~~~~------~~~g~~~TGDl~~~~~~g~l~i~GR~ 432 (547)
T PRK06087 363 GVEIKVVDEARKTLPPGC--EGEEASRGPNVFMGY--LDEPELTARAL------DEEGWYYSGDLCRMDEAGYIKITGRK 432 (547)
T ss_pred CceEEEEcCCCCCCcCCC--cceEEEecccccccc--cCCHHHHHHHh------CCCCCcCcCceEEECCCCCEEEEecc
Confidence 999999999999999998 699999 44443321 11222222222 34579999999999999999999999
Q ss_pred CceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccc
Q 010344 396 DDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFK 475 (512)
Q Consensus 396 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 475 (512)
+|+|+.+|++|+|.+||++|. .+|+|.++++++.+++..+ +.++++++..+.....+.+++.+++. .+.++++++
T Consensus 433 ~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~l~~~~~ 507 (547)
T PRK06087 433 KDIIVRGGENISSREVEDILL-QHPKIHDACVVAMPDERLG-ERSCAYVVLKAPHHSLTLEEVVAFFS---RKRVAKYKY 507 (547)
T ss_pred hhhhhcCCEEECHHHHHHHHH-hCCCeeEEEEEecCCCCcC-ceEEEEEEECCCCCCCCHHHHHHHHH---hccccccCC
Confidence 999999999999999999998 8999999999999988888 89999999876322245555554443 357899999
Q ss_pred eeeEEEecCCCCCCCchHHHHHHHHHHHhhhhcc
Q 010344 476 VSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVR 509 (512)
Q Consensus 476 p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~ 509 (512)
|..|.++++||+|.+||++|+.|++++.+++...
T Consensus 508 P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~~~~ 541 (547)
T PRK06087 508 PEHIVVIDKLPRTASGKIQKFLLRKDIMRRLTQD 541 (547)
T ss_pred CeEEEEeccCCCCCCCcCcHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999998876543
No 62
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2.1e-60 Score=488.99 Aligned_cols=465 Identities=17% Similarity=0.190 Sum_probs=366.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++++++..+.+++.++++++++++++++..... ...
T Consensus 57 ~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~-~~~ 135 (527)
T TIGR02275 57 RADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSL-FDY 135 (527)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccc-cch
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999864210 000
Q ss_pred ccchhhHHhcCCC-ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 81 FPLYSKVAEAGPL-KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
.+....+....+. ...++.. ... ........+..... ..+.....++++++++|||||||.||+|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~ 202 (527)
T TIGR02275 136 DAFARQLQSKLPTLRNIIVAG-QTR-------VEAELFLWLESPAE-----PVKFPPTKSDEVAFFQLSGGSTGTPKLIP 202 (527)
T ss_pred HHHHHHHHhhCCcceEEEEec-CCC-------CcchhhHHhhCcCc-----cccCCCCCCCccEEEEeCCCCCCCCceee
Confidence 0111222222221 1112211 000 00011111111111 11122345788999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH--HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII--LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
+||.++..++......+.+..+|++++.+|++|.+++.. ++.++..|+++++.+ ..++..+++.++++++|++.++|
T Consensus 203 ~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p 281 (527)
T TIGR02275 203 RTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAP-DPSPTDCFPLIERHKVTVTALVP 281 (527)
T ss_pred eehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECC-CCCHHHHHHHHHHhCCeEEEecH
Confidence 999999988887777788899999999999999998763 788899999998854 56788999999999999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCccccccccc-C
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTAT-M 316 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~-~ 316 (512)
+++..|++.......+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++..............+++|.|+ +
T Consensus 282 ~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~ 360 (527)
T TIGR02275 282 PAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSP 360 (527)
T ss_pred HHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEeeeccCccCccccCCCCccccccccCCCCCCC
Confidence 999999877666667788999999999999999999998887 78999999999975433322222233456889999 4
Q ss_pred CccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEecc
Q 010344 317 TTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRA 395 (512)
Q Consensus 317 ~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~ 395 (512)
+..++|+|++|++++.|+ .|||++ ++..+.+| +.+++.+...+ +.++||+|||+|+++++|++++.||.
T Consensus 361 ~~~v~i~d~~g~~~~~g~--~Gei~v~g~~~~~gY--~~~~~~~~~~~------~~dg~~~TGDl~~~~~~g~l~~~gR~ 430 (527)
T TIGR02275 361 DDEVRVVDDHGNPVAPGE--TGMLLTRGPYTFRGY--YKAPEHNAAAF------DAEGFYYTGDLVRLTPEGYIVVVGRA 430 (527)
T ss_pred CceEEEECCCCCCCCCCC--ceEEEecCCccchhh--cCChhHhHhhc------CcCCCEEcCceEEEcCCccEEEEecc
Confidence 889999999999999999 699999 55544332 22333333333 34579999999999999999999999
Q ss_pred CceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccc
Q 010344 396 DDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFK 475 (512)
Q Consensus 396 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 475 (512)
+|+|+.+|++|+|.+||++|. .||+|.+++|++.++...+ +.++++|+++++. .+..++.+++++ .++++|+.
T Consensus 431 ~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~vv~~~~~--~~~~~l~~~l~~---~~l~~~~~ 503 (527)
T TIGR02275 431 KDQINRGGEKIAAEEIENLLL-AHPAVHDAALVSMPDELLG-EKSCAFIVVRDPA--LKAAQLRRFLRE---RGLAEYKL 503 (527)
T ss_pred cceeecCCEEECHHHHHHHHH-hCCCceEEEEEecCCcccc-cEEEEEEEECCCC--CCHHHHHHHHHh---CCCccccC
Confidence 999999999999999999998 9999999999999998888 8899999987642 455555555542 25999999
Q ss_pred eeeEEEecCCCCCCCchHHHHHHH
Q 010344 476 VSLVKIVLEFPRTASNKLLRRVLK 499 (512)
Q Consensus 476 p~~i~~~~~iP~t~~GKi~r~~l~ 499 (512)
|..|.++++||+|++||++|+.|+
T Consensus 504 P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 504 PDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred CCEEEEeccCCCCCccceeHHhcC
Confidence 999999999999999999999874
No 63
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.9e-60 Score=491.70 Aligned_cols=478 Identities=20% Similarity=0.190 Sum_probs=355.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|... +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++...
T Consensus 48 ~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~----- 122 (579)
T PLN03102 48 RCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFE----- 122 (579)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcC-------CCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010344 81 FPLYSKVAEAG-------PLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTG 153 (512)
Q Consensus 81 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 153 (512)
+.+..+.... ....+.++...... .......+|.++...................++++++++|||||||
T Consensus 123 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG 199 (579)
T PLN03102 123 -PLAREVLHLLSSEDSNLNLPVIFIHEIDFPK--RPSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTA 199 (579)
T ss_pred -HHHHHHHhhccccccccCceEEEeccccccc--CCcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCC
Confidence 2223222221 11223322111100 0011234566666543321111000111235678999999999999
Q ss_pred CCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEE
Q 010344 154 EPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVL 233 (512)
Q Consensus 154 ~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l 233 (512)
.||+|+++|.++............+...+++++..|++|..++...+.++..|+++++.+ ..++..+++.|+++++|++
T Consensus 200 ~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~ 278 (579)
T PLN03102 200 DPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMR-HVTAPEIYKNIEMHNVTHM 278 (579)
T ss_pred CCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhHHHHHHHhcCcEEeec-cCChHHHHHHHHHcCCeEE
Confidence 999999999997555444333445667788999999999999877778888999998876 4567889999999999999
Q ss_pred ecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC---------
Q 010344 234 GTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ--------- 304 (512)
Q Consensus 234 ~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~--------- 304 (512)
.++|+++..|++.........++++.+++||+++++.+.+++.. + +.++++.||+||+++.++.+....
T Consensus 279 ~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 356 (579)
T PLN03102 279 CCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQ 356 (579)
T ss_pred EeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-CCeEEeecCccccCccccccccccccccCCccc
Confidence 99999999998765444444567888999999999998888764 4 688999999999986443221100
Q ss_pred ----CCcccccccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeec
Q 010344 305 ----PQAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHG 378 (512)
Q Consensus 305 ----~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TG 378 (512)
....+..+.+.+ .+++.| +.+++++.+....|||++ ++..+.+| +.+++.+...| .++||+||
T Consensus 357 ~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY--~~~~~~t~~~f-------~~gw~~TG 425 (579)
T PLN03102 357 QMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSIMKGY--LKNPKATSEAF-------KHGWLNTG 425 (579)
T ss_pred ccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcchhhhh--cCChhhhHhhh-------ccCceecC
Confidence 001222233333 456666 456677653111699999 54444322 22333333333 24699999
Q ss_pred ceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHH--
Q 010344 379 DIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVD-- 456 (512)
Q Consensus 379 D~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~-- 456 (512)
|+|++|+||++++.||.+|+|+.+|++|+|.+||++|. +||.|.+++|++++++..+ +.++++|++.++.. .+..
T Consensus 426 Dlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~a~vv~~~~~~~~-~~~~a~v~~~~~~~-~~~~~~ 502 (579)
T PLN03102 426 DVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLY-KYPKVLETAVVAMPHPTWG-ETPCAFVVLEKGET-TKEDRV 502 (579)
T ss_pred ceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHH-hCCCcceeEEEeccCcccc-ceeEEEEEecCccc-cccccc
Confidence 99999999999999999999999999999999999998 8999999999999998888 89999999876543 2110
Q ss_pred ----HHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 457 ----KLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 457 ----~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
.-...+++.+.++|++|++|..|+++++||+|++||++|++|++++++
T Consensus 503 ~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 503 DKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred ccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 013456667778899999999999999999999999999999998865
No 64
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=7.2e-60 Score=488.33 Aligned_cols=470 Identities=21% Similarity=0.217 Sum_probs=363.1
Q ss_pred HHHHHHHHhc-c-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 3 YRLVANALDT-M-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 3 ~~~~a~~L~~-~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++...
T Consensus 59 ~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~----- 133 (562)
T PRK12492 59 SAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFG----- 133 (562)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccc-----
Confidence 6889999987 4 99999999999999999999999999999999999999999999999999999999976421
Q ss_pred ccchhhHHhcCCCceEEeeccC---------------C----cccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIG---------------D----DVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDS 141 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (512)
.....+............... . .......+...+|+++...... ..........++
T Consensus 134 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 208 (562)
T PRK12492 134 -KLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRG----LSLKPVPVGLDD 208 (562)
T ss_pred -hHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCCcccccHHHHHhccCC----CCCCCCCCCcCC
Confidence 111111111100000000000 0 0000001122455555443221 111122345678
Q ss_pred eEEEEecCCCCCCCceEEecCchhHHHHHHhhcccc---------ccC-CcEEEecCCccchhhhHH-HHhhhccCceEE
Q 010344 142 VINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHID---------MKV-GDVYCWPTNLGWVMGPII-LFSSFLSGAALA 210 (512)
Q Consensus 142 ~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~ 210 (512)
+++++|||||||.||+|+++|+++..++......+. +.. .+++++.+|++|.+++.. ++..+..|+.++
T Consensus 209 ~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~ 288 (562)
T PRK12492 209 IAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNV 288 (562)
T ss_pred eEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEE
Confidence 999999999999999999999999877655443322 223 356788899999999865 667778888877
Q ss_pred EecCCCchhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCC
Q 010344 211 LYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGG 290 (512)
Q Consensus 211 ~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~ 290 (512)
+.....++..+++.++++++|++.++|+++..|++.......+++++|.+++||+++++++.+.+.+.+ ++++++.||+
T Consensus 289 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~ 367 (562)
T PRK12492 289 LITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSGGTALVKATAERWEQLT-GCTIVEGYGL 367 (562)
T ss_pred EecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEeccccCCHHHHHHHHHHh-CCceeeccCc
Confidence 766556778999999999999999999999999887655667788999999999999999999988776 7899999999
Q ss_pred ccccceecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcc
Q 010344 291 TELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIY 369 (512)
Q Consensus 291 tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (512)
||++.+.+..........+++|.|+++++++|+|+++++++.|+ .|||++ ++..+.+ ++.+++.+...|
T Consensus 368 tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~--~Gel~v~g~~~~~g--Y~~~~~~t~~~~------ 437 (562)
T PRK12492 368 TETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELPLGE--RGELCIKGPQVMKG--YWQQPEATAEAL------ 437 (562)
T ss_pred cccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCCCCC--ceEEEEeCCccccc--cccCchhhhhcc------
Confidence 99987665544333344578999999999999999999999999 699999 5444432 222344343333
Q ss_pred cCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCC
Q 010344 370 KGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKG 449 (512)
Q Consensus 370 ~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~ 449 (512)
+.++||+|||+|+++++|++++.||.+|+++++|++|+|.+||+.|. +||.|.+++|++.++...+ +.+.++++..+.
T Consensus 438 ~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~ 515 (562)
T PRK12492 438 DAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVM-AHPKVANCAAIGVPDERSG-EAVKLFVVARDP 515 (562)
T ss_pred cCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCCC
Confidence 23579999999999999999999999999999999999999999998 8999999999999888777 788888887643
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHH
Q 010344 450 FTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQ 501 (512)
Q Consensus 450 ~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~ 501 (512)
. .+.++ +++++.++|++|++|..|.++++||+|++||++|++|+++
T Consensus 516 ~--~~~~~----i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 516 G--LSVEE----LKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred C--CCHHH----HHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHHhh
Confidence 2 34444 4445557888999999999999999999999999999875
No 65
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3e-61 Score=580.20 Aligned_cols=457 Identities=16% Similarity=0.167 Sum_probs=378.7
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++.....
T Consensus 3129 ~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~--- 3205 (3956)
T PRK12467 3129 RANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQ--- 3205 (3956)
T ss_pred HHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhh---
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999998743211
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
+..........++ +...... ....+.....++++++++|||||||+||||++
T Consensus 3206 ------~~~~~~~~~~~~~------------------~~~~~~~----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~ 3257 (3956)
T PRK12467 3206 ------LPAPAGDTALTLD------------------RLDLNGY----SENNPSTRVMGENLAYVIYTSGSTGKPKGVGV 3257 (3956)
T ss_pred ------cccccCCceeeec------------------chhhccc----CCCCCcccCCCCceEEEEEccCCCCCcceeee
Confidence 0000011111111 0000000 01112233467889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC-CchhhHHHHHHhcCceEEecchHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS-PLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
+|+++.+.+.+....+++.++|+++.+.|++|..+.+.++.+|+.|+++++.+.. .++..+++.|+++++|++.++|++
T Consensus 3258 ~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~ 3337 (3956)
T PRK12467 3258 RHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAY 3337 (3956)
T ss_pred hhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHH
Confidence 9999999998888889999999999999999999988899999999999998732 578899999999999999999999
Q ss_pred HHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCC----Cccccccccc
Q 010344 240 VKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQP----QAFGAFSTAT 315 (512)
Q Consensus 240 ~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~----~~~~~~G~p~ 315 (512)
+..|++.. ...++++||.+++|||++++++.+.+.+.+++.++++.||+||++...+....... ....++|+|+
T Consensus 3338 l~~l~~~~--~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~ 3415 (3956)
T PRK12467 3338 LQQFAEDA--GGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPV 3415 (3956)
T ss_pred HHHHHhcc--cccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCcccc
Confidence 99997653 24467899999999999999999999888878889999999999876554332211 2346899999
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCc-ccCceeeeecceEEEeCCCeEEEEe
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPI-YKGMHLRRHGDIIKRTVGGYIIVQG 393 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~TGD~~~~~~~g~l~i~g 393 (512)
+|++++|+|++++++|.|+ .|||+| ++++..+| +.+++.+...|..++. ..+.+||+|||+|++++||+++++|
T Consensus 3416 ~~~~~~v~d~~~~~vp~G~--~GEL~i~G~~v~~GY--~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~G 3491 (3956)
T PRK12467 3416 AGRSIYVLDGQLNPVPVGV--AGELYIGGVGLARGY--HQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLG 3491 (3956)
T ss_pred CCCEEEEECCCCCCCCCCC--CceEEEcchhhhhhc--cCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEec
Confidence 9999999999999999999 699999 66665543 3456677777777776 5678999999999999999999999
Q ss_pred ccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCc
Q 010344 394 RADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPL 473 (512)
Q Consensus 394 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 473 (512)
|+||+||++|++|+|.|||++|. ++|+|.+++|+..++ ..+ +.++++|+..++.. .. .+.++++++++|+.|
T Consensus 3492 R~d~~iki~G~rIe~~EIE~~l~-~~p~V~~a~v~~~~~-~~~-~~lva~v~~~~~~~-~~----~~~l~~~l~~~Lp~y 3563 (3956)
T PRK12467 3492 RIDHQVKIRGFRIELGEIEARLL-QHPSVREAVVLARDG-AGG-KQLVAYVVPADPQG-DW----RETLRDHLAASLPDY 3563 (3956)
T ss_pred cccceEeeceEeecHHHHHHHHh-hCcccceEEEEEecC-CCC-cEEEEEEeCCCCCc-cc----HHHHHHHHhccCChh
Confidence 99999999999999999999998 899999999998754 445 79999999876432 33 345666667899999
Q ss_pred cceeeEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 474 FKVSLVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 474 ~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
++|..|+++++||+|++||++|++|++...
T Consensus 3564 ~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 3593 (3956)
T PRK12467 3564 MVPAQLLVLAAMPLGPNGKVDRKALPDPDA 3593 (3956)
T ss_pred hCCCeeeeeccCCCCCCCccchhhcCCCCc
Confidence 999999999999999999999999987544
No 66
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-60 Score=493.83 Aligned_cols=475 Identities=17% Similarity=0.127 Sum_probs=357.0
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++...
T Consensus 71 ~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~----- 145 (600)
T PRK08279 71 RANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELV----- 145 (600)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999997432
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
+.+..+.........++....... .....|.++.......+............+++++++|||||||.||+|++
T Consensus 146 -~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~ 219 (600)
T PRK08279 146 -EAFEEARADLARPPRLWVAGGDTL-----DDPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVM 219 (600)
T ss_pred -HHHHHHhhhhcccceEEEecCccc-----cccccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEE
Confidence 222333222222111111111000 01234555544333211111112233456889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
||+++.+++.+....+++.++|++++.+|++|.+++.. ++.++..|+++++.+ ..++..+++.++++++|++.++|++
T Consensus 220 sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~l 298 (600)
T PRK08279 220 SHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRR-KFSASRFWDDVRRYRATAFQYIGEL 298 (600)
T ss_pred eHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcC-CCCHHHHHHHHHHhcceEEeehHHH
Confidence 99999999888877788999999999999999999876 556677777777754 6778899999999999999999999
Q ss_pred HHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccC---
Q 010344 240 VKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATM--- 316 (512)
Q Consensus 240 ~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~--- 316 (512)
+..++...........+++.+ +|+.+++++.+.+.+.++...+++.||+||++..++.. ....+++|.+.+
T Consensus 299 ~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~ 372 (600)
T PRK08279 299 CRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV----FNFDGTVGRVPLWLA 372 (600)
T ss_pred HHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc----CCCCccccccccccc
Confidence 999887654444445677764 47789999999999888655799999999988643321 123356666555
Q ss_pred -Cc---------cEEEeCCCC--CCCCCCCCccccccc---ccccccccccccccCcceeEEecCCcccCceeeeecceE
Q 010344 317 -TT---------GFVILDELG--VPYPDDQPCVGEVGL---FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDII 381 (512)
Q Consensus 317 -~~---------~~~i~d~~~--~~~~~g~~~~Gel~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~ 381 (512)
+. ...+.+.++ .+++.|+ .||+++ ++..+. +|.++..+...|..+...++++||+|||+|
T Consensus 373 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~--~Gel~~~i~~~~~~~---GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg 447 (600)
T PRK08279 373 HPYAIVKYDVDTGEPVRDADGRCIKVKPGE--VGLLIGRITDRGPFD---GYTDPEASEKKILRDVFKKGDAWFNTGDLM 447 (600)
T ss_pred ccceeeeeccCcCceeeCCCCccccCCCCC--ceeEEEEecCccccc---ccCCchhhHHHHhhcccCCCCceEeecceE
Confidence 22 223334333 3577888 699984 344333 344555544444333344567899999999
Q ss_pred EEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHH
Q 010344 382 KRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMI 461 (512)
Q Consensus 382 ~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~ 461 (512)
++++||++++.||.||+||++|++|+|.+||++|. ++|+|.+++|++++++..+....++++++.++.. .+.+++.+
T Consensus 448 ~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~-~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~-~~~~~l~~- 524 (600)
T PRK08279 448 RDDGFGHAQFVDRLGDTFRWKGENVATTEVENALS-GFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAE-FDLAALAA- 524 (600)
T ss_pred EEcCCccEEEecccCCeEEECCcccCHHHHHHHHh-cCCCcceEEEEEeecCCCCCccceeEEEecCCcc-CCHHHHHH-
Confidence 99999999999999999999999999999999998 8999999999998876533245666666665433 55555555
Q ss_pred HHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 462 FSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 462 ~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
+++++|++|++|..|+++++||+|.+||++|+.|++++.+.
T Consensus 525 ---~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 525 ---HLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred ---HHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 45578899999999999999999999999999999877654
No 67
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-60 Score=497.53 Aligned_cols=463 Identities=20% Similarity=0.183 Sum_probs=349.6
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeec-CCCcC--HHHHHHHHHhcCccEEEeccchhccC
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSI-ADSFA--AREIATRLRVSKAKGIFTQDFILRGG 78 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~iv~~~~~~~~~ 78 (512)
.++++|++|.+.+++||+|+++++|+++|++++|||+++|++++|+ ++.++ .+++.+++++++++++|+++...
T Consensus 77 ~~~~lA~~L~~~~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~--- 153 (612)
T PRK12476 77 RLRAVGARLQQVAGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAA--- 153 (612)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHH---
Confidence 3688999997669999999999999999999999999999999999 57766 78999999999999999987432
Q ss_pred ccccchhhHHhcCC----CceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 79 RKFPLYSKVAEAGP----LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 79 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
+.+..+..... ...+.++ . +..... .........++++++++|||||||.
T Consensus 154 ---~~~~~~~~~~~~~~~~~~i~~~--~----------------~~~~~~-----~~~~~~~~~~~d~a~i~yTSGTTG~ 207 (612)
T PRK12476 154 ---EAVEGFLRNLPRLRRPRVIAID--A----------------IPDSAG-----ESFVPVELDTDDVSHLQYTSGSTRP 207 (612)
T ss_pred ---HHHHHHHhhcccccCceEEEec--c----------------cccccc-----ccccCCCCCCCceEEEEeCCCCCCC
Confidence 12222222111 1111111 0 000000 0111122356889999999999999
Q ss_pred CceEEecCchhHHHHHHhhcccc-ccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC-CC--chhhHHHHHH--hc
Q 010344 155 PKAIPWTQLSPIRCAAEAWGHID-MKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG-SP--LERSFGKFVQ--DS 228 (512)
Q Consensus 155 pK~v~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~--~~~~~~~~l~--~~ 228 (512)
||||+++|+++.+++......++ +.+++++++.+|++|..++..++.+++.|+++++..+ .+ ++..+++.++ ++
T Consensus 208 PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~ 287 (612)
T PRK12476 208 PVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSR 287 (612)
T ss_pred CceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhcc
Confidence 99999999999887776665666 6888999999999999998776666556666666543 22 6788999995 58
Q ss_pred CceEEecchHHHHHHHccCC----CCCCCcCceeEEEeecCCCCchhhHHHHHhhC-----CCCeeeecCCccccceecc
Q 010344 229 GVSVLGTVPSLVKAWKNTNC----LQGLDWTKIRSFASTGETSNVDDDLWLASKAY-----YKPIIECCGGTELASSYIQ 299 (512)
Q Consensus 229 ~~t~l~~~P~~~~~l~~~~~----~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-----~~~i~~~yG~tE~~~~~~~ 299 (512)
++|+++.+|+++..++.... ....+++++| +++||+++++++.+.+.+.+. ..++++.||+||++...+.
T Consensus 288 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~ 366 (612)
T PRK12476 288 TGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVAT 366 (612)
T ss_pred CCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeec
Confidence 99999999999887765321 1345688999 999999999999999988762 2359999999998765432
Q ss_pred cCCCC--------------------------CCcccccccccCCccEEEeCCC-CCCCCCCCCccccccc-ccccccccc
Q 010344 300 GSMLQ--------------------------PQAFGAFSTATMTTGFVILDEL-GVPYPDDQPCVGEVGL-FPLYLGATD 351 (512)
Q Consensus 300 ~~~~~--------------------------~~~~~~~G~p~~~~~~~i~d~~-~~~~~~g~~~~Gel~v-~~~~~~~~~ 351 (512)
..... ....+++|+|+++++++|+|++ |++++.|+ .|||++ ++..+.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~--~GEl~v~g~~v~~G-- 442 (612)
T PRK12476 367 IAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGE--VGEIWLHGDNIGRG-- 442 (612)
T ss_pred cCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCC--EEEEEEcCCccccc--
Confidence 21110 0012578999999999999977 99999999 699999 5444432
Q ss_pred cccccCcceeEEecCC------------cccCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCC
Q 010344 352 RLLNADHEEVYFSGMP------------IYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGAD 419 (512)
Q Consensus 352 ~~~~~~~~~~~~~~~~------------~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~ 419 (512)
|+.+++.+...|.... ..++++||+|||+|++ +||+++|+||+||+||++|++|+|.+||++|.+.|
T Consensus 443 Y~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~ 521 (612)
T PRK12476 443 YWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-LDGELYITGRIADLIVIDGRNHYPQDIEATVAEAS 521 (612)
T ss_pred ccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee-ECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhc
Confidence 2334444444443100 0123579999999998 49999999999999999999999999999997348
Q ss_pred cceee--eeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccc-eeeEEEec--CCCCCCCchHH
Q 010344 420 ESILE--TAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFK-VSLVKIVL--EFPRTASNKLL 494 (512)
Q Consensus 420 ~~v~~--~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-p~~i~~~~--~iP~t~~GKi~ 494 (512)
|.|.+ ++|++++++. + +.++++++++++....+.+++.+++++++..+ |+. |..+.+++ +||+|++||++
T Consensus 522 p~V~~~~v~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~---~~~~p~~v~~v~~~~lP~t~~GKi~ 596 (612)
T PRK12476 522 PMVRRGYVTAFTVPAED-N-ERLVIVAERAAGTSRADPAPAIDAIRAAVSRR---HGLAVADVRLVPAGAIPRTTSGKLA 596 (612)
T ss_pred ccccCCcEEEEEecCCC-c-ceEEEEEEecCCcccccHHHHHHHHHHHHHHh---hCCcceEEEEECCCCcCcCCchHHH
Confidence 99999 6778887766 6 78999999887643256778888888777643 456 57888886 69999999999
Q ss_pred HHHHHHHHHh
Q 010344 495 RRVLKDQLKH 504 (512)
Q Consensus 495 r~~l~~~~~~ 504 (512)
|++|++++.+
T Consensus 597 r~~L~~~~~~ 606 (612)
T PRK12476 597 RRACRAQYLD 606 (612)
T ss_pred HHHHHHHHHc
Confidence 9999998864
No 68
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.2e-59 Score=483.96 Aligned_cols=471 Identities=18% Similarity=0.185 Sum_probs=372.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++++.+.....++..++++++++++++++... ....
T Consensus 57 ~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~-~~~~ 135 (536)
T PRK10946 57 ASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHA-LFSD 135 (536)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEecccc-ccch
Confidence 378999999999 99999999999999999999999999999988877777888999999999999999986421 0000
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
......+....+....++.... .....+.+++..... ........++++++++|||||||.||+|++
T Consensus 136 ~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~ 202 (536)
T PRK10946 136 DDFLNTLVAEHSSLRVVLLLND--------DGEHSLDDAINHPAE-----DFTATPSPADEVAFFQLSGGSTGTPKLIPR 202 (536)
T ss_pred HHHHHHHHhhCCCceEEEEecC--------CCCccHHHHhhCccc-----ccccCCCCCCCeEEEEeCCCCCCCCcEEEE
Confidence 1112223232222222221111 122345554433221 111233457889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhH--HHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPI--ILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
||.++...+......+++.++|++++.+|++|.+++. .++.++..|+++++.+ ..++..+++.++++++|++.++|.
T Consensus 203 s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 281 (536)
T PRK10946 203 THNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP-DPSATLCFPLIEKHQVNVTALVPP 281 (536)
T ss_pred ehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-CCCHHHHHHHHHHhCCcEEEeChH
Confidence 9999999988887788899999999999999998875 3788899999998864 567788999999999999999999
Q ss_pred HHHHHHccC--CCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCccccccccc-
Q 010344 239 LVKAWKNTN--CLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTAT- 315 (512)
Q Consensus 239 ~~~~l~~~~--~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~- 315 (512)
++..|++.. ......++++|.+++||+++++++.+.+.+.+ ++++++.||+||++..............+++|.|+
T Consensus 282 ~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~ 360 (536)
T PRK10946 282 AVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMS 360 (536)
T ss_pred HHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEeecccccceeeecCCCccccccccCCcccC
Confidence 999987752 23345568999999999999999999998877 78999999999976443322222233457899998
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEec
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGR 394 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR 394 (512)
+++.++|+|+++++++.|+ .|||++ ++..+.+| +.+++.+...| ..++||+|||+|++|++|++++.||
T Consensus 361 ~~~~v~i~d~~~~~~~~g~--~Gel~v~g~~~~~GY--~~~~~~t~~~~------~~d~~~~TGDl~~~d~~G~l~~~gR 430 (536)
T PRK10946 361 PDDEVWVADADGNPLPQGE--VGRLMTRGPYTFRGY--YKSPQHNASAF------DANGFYCSGDLVSIDPDGYITVVGR 430 (536)
T ss_pred CCceEEEECCCCCCCCCCC--ccEEEEecCccchhh--cCCcccchhhc------ccCCceecCceEEECCCCcEEEecc
Confidence 7999999999999999999 699999 55554432 22333333334 3457999999999999999999999
Q ss_pred cCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcc
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLF 474 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 474 (512)
.+|+++++|++|+|.+||+.|. .+|+|.++++++.++...+ +.++++++++++ .+.+++.+++++ ..+++|+
T Consensus 431 ~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~a~vv~~~~---~~~~~l~~~~~~---~~l~~~~ 502 (536)
T PRK10946 431 EKDQINRGGEKIAAEEIENLLL-RHPAVIHAALVSMEDELMG-EKSCAFLVVKEP---LKAVQLRRFLRE---QGIAEFK 502 (536)
T ss_pred ccceeecCCEEEcHHHHHHHHH-hCCCcceEEEEcCCCcccC-ceEEEEEEeCCC---CCHHHHHHHHHh---CCccccc
Confidence 9999999999999999999998 8999999999999998878 788999988764 455566655542 2488999
Q ss_pred ceeeEEEecCCCCCCCchHHHHHHHHHHHhhh
Q 010344 475 KVSLVKIVLEFPRTASNKLLRRVLKDQLKHEL 506 (512)
Q Consensus 475 ~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~ 506 (512)
+|..+.+++++|+|++||++|++|++++++..
T Consensus 503 ~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 503 LPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred cCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 99999999999999999999999999887653
No 69
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-59 Score=480.71 Aligned_cols=457 Identities=19% Similarity=0.173 Sum_probs=366.3
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++|++|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++++++....
T Consensus 36 ~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~---- 111 (497)
T PRK06145 36 RILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDA---- 111 (497)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhh----
Confidence 368899999999 999999999999999999999999999999999999999999999999999999999874321
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
. .. .......++... ...+..+.. ... .........++++++++|||||||.||+|++
T Consensus 112 --~----~~-~~~~~~~~~~~~----------~~~~~~~~~-~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~ 169 (497)
T PRK06145 112 --I----VA-LETPKIVIDAAA----------QADSRRLAQ-GGL----EIPPQAAVAPTDLVRLMYTSGTTDRPKGVMH 169 (497)
T ss_pred --h----hh-cccceEEecCcc----------cchhHHHhc-cCC----CCCCCCCCCccceEEEEeCCCCCCCCcEEEE
Confidence 0 00 011111111100 001111111 000 0111123456889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
+|.++..........+++..+++++...|++|.+++.. .+.+++.|+++++.+ ..++..+++.++++++|++.++|++
T Consensus 170 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 248 (497)
T PRK06145 170 SYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHR-EFDPEAVLAAIERHRLTCAWMAPVM 248 (497)
T ss_pred ecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECC-cCCHHHHHHHHHHhCCeEEEehHHH
Confidence 99998876666666678899999999999999988854 577889999998865 5678999999999999999999999
Q ss_pred HHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC-CCCcccccccccCCc
Q 010344 240 VKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML-QPQAFGAFSTATMTT 318 (512)
Q Consensus 240 ~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~~ 318 (512)
+..++........+++++|.+++||+++++++.+.+.+.+++.++++.||+||++...+..... .....+++|.|++++
T Consensus 249 ~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~ 328 (497)
T PRK06145 249 LSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHV 328 (497)
T ss_pred HHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCc
Confidence 9999877655566778999999999999999999999988788999999999998754432221 123456899999999
Q ss_pred cEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCc
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADD 397 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d 397 (512)
+++++|+++++++.|+ .|||++ ++..+.+| +.+++.+...| .++||+|||+|+++++|+++++||.+|
T Consensus 329 ~~~i~~~~~~~~~~~~--~Gel~v~g~~~~~Gy--~~~~~~~~~~~-------~~~~~~TGDl~~~~~~g~l~~~GR~~~ 397 (497)
T PRK06145 329 EIRIADGAGRWLPPNM--KGEICMRGPKVTKGY--WKDPEKTAEAF-------YGDWFRSGDVGYLDEEGFLYLTDRKKD 397 (497)
T ss_pred eEEEECCCCCCCCCCC--ceEEEEECcchhhhh--cCChHHHHHHH-------hCCCeeccceEEEcCCCcEEEeccccc
Confidence 9999999999999998 699999 54443321 11222222222 136999999999999999999999999
Q ss_pred eeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcccee
Q 010344 398 TMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVS 477 (512)
Q Consensus 398 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~ 477 (512)
+|+.+|++++|.+||+.|. .+|+|.+++|++..++..+ +.+.+++++.+... .+.+++.++ ++++|++|+.|.
T Consensus 398 ~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~----~~~~l~~~~~p~ 470 (497)
T PRK06145 398 MIISGGENIASSEVERVIY-ELPEVAEAAVIGVHDDRWG-ERITAVVVLNPGAT-LTLEALDRH----CRQRLASFKVPR 470 (497)
T ss_pred eEEeCCeEECHHHHHHHHH-hCCCeeEEEEEecCCCccC-ceEEEEEEECCCCC-CCHHHHHHH----HHHhhhcCCCCC
Confidence 9999999999999999998 8999999999999988777 78999999876544 455555554 456788999999
Q ss_pred eEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 478 LVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 478 ~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
.|+++++||+|++||++|++|+++++
T Consensus 471 ~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 471 QLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEeccCCCCCcccccHHHHHHHhc
Confidence 99999999999999999999998765
No 70
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-60 Score=465.47 Aligned_cols=480 Identities=16% Similarity=0.141 Sum_probs=366.9
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
+..++.+|+.. +++++.|+|+..|++||+++.+||...|.++|||..+++++.+++++++++..++|++++ +..
T Consensus 118 ~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~-----~k~ 192 (691)
T KOG1256|consen 118 AENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNA-----KKA 192 (691)
T ss_pred HHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCH-----HHH
Confidence 67899999988 999999999999999999999999999999999999999999999999999999999965 122
Q ss_pred cchhhHHhc--CC-CceEEeecc-CCcc---cccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 82 PLYSKVAEA--GP-LKAVVLPVI-GDDV---GIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 82 ~~~~~~~~~--~~-~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
..+.+.... .+ .+.++.-.. .... ........++|+++.+.+.. ....+. .+..++|.|.|+|||||||.
T Consensus 193 ~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~--~~~~~~-~~p~p~d~atI~yTSGTTG~ 269 (691)
T KOG1256|consen 193 EKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDEFEELGKK--NQRKPR-VPPKPDDLATICYTSGTTGN 269 (691)
T ss_pred HHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHHHHhhccc--ccCCCC-CCCCccceEEEEEcCCCCCC
Confidence 233333322 22 232322211 1111 11112347899999998875 222222 56788999999999999999
Q ss_pred CceEEecCchhHHHHHHhhc---cc---cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhc
Q 010344 155 PKAIPWTQLSPIRCAAEAWG---HI---DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDS 228 (512)
Q Consensus 155 pK~v~~s~~~~~~~~~~~~~---~~---~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~ 228 (512)
|||||+||+|+.+.+..... .. .....|++++++|+.|++....-...++.|+++.++.+ ++..+.+.|++.
T Consensus 270 PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~g--D~~~l~~dlk~l 347 (691)
T KOG1256|consen 270 PKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARG--DILKLTDDLKEL 347 (691)
T ss_pred CceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecC--ChHHHHHHHHHh
Confidence 99999999999986553221 11 12236999999999999999886677799999999874 456778889999
Q ss_pred CceEEecchHHHHHHHcc-----------------------C---CCCCCC-------------------cCceeEEEee
Q 010344 229 GVSVLGTVPSLVKAWKNT-----------------------N---CLQGLD-------------------WTKIRSFAST 263 (512)
Q Consensus 229 ~~t~l~~~P~~~~~l~~~-----------------------~---~~~~~~-------------------l~~l~~i~~~ 263 (512)
+||++.++|..|+++.+. . -..+.. ...+|.+++|
T Consensus 348 kPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sG 427 (691)
T KOG1256|consen 348 KPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISG 427 (691)
T ss_pred CCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEec
Confidence 999999999998887543 0 000000 2468999999
Q ss_pred cCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeC-CCCCCCCCCCCccccccc
Q 010344 264 GETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGL 342 (512)
Q Consensus 264 G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v 342 (512)
++|+++++.+.++..+ ++++.++||+||+++..+....... ..+++|.|+|+++++++| ++.+-.+.|. .|||++
T Consensus 428 aAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~~--~GEIci 503 (691)
T KOG1256|consen 428 AAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTLPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADGS--KGEICV 503 (691)
T ss_pred CCCCCHHHHHHHHHhc-CceeeecccccccCCceEeccCCCC-CCCCcCCcccCceEEEechHHhCcCcCCC--cceEEE
Confidence 9999999999999887 7999999999999855544444344 789999999999999998 4444455555 499999
Q ss_pred -ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceee-ecceecchHHHHHhhhcCCc
Q 010344 343 -FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDGADE 420 (512)
Q Consensus 343 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~-~~G~~v~~~~iE~~l~~~~~ 420 (512)
++.++.+ ||.+++.+.+.+ +.+||+||||+|+|+++|.+.|.||+++++| .+|++|.|+.||++.. ..+
T Consensus 504 rG~~Vf~G--YyK~p~~T~e~i------deDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~-~~~ 574 (691)
T KOG1256|consen 504 RGPNVFMG--YYKDPEKTAEAI------DEDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYK-RSL 574 (691)
T ss_pred ecchhcee--ccCChHHHhhhh------ccccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHh-cCC
Confidence 7777764 344666666655 6789999999999999999999999999999 5999999999999998 788
Q ss_pred ceeeeeEEeeCCCCCCCceEEEEEEecCCCCC-------C--cHHH----------HHHHHHHHH-HhccCCccceeeEE
Q 010344 421 SILETAAISVSPAGGGPEVLVICVVLKKGFTS-------Q--PVDK----------LKMIFSKAI-QRNLNPLFKVSLVK 480 (512)
Q Consensus 421 ~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~-------~--~~~~----------l~~~~~~~~-~~~l~~~~~p~~i~ 480 (512)
.|.+.+|.+.... ..++|+|+++++... . +.++ +..++.+.. .+.|..+.....|.
T Consensus 575 ~V~qi~V~g~s~~----~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~ 650 (691)
T KOG1256|consen 575 PVQQIFVLGDSLR----SFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVH 650 (691)
T ss_pred ceEEEEEECCcch----hcEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEE
Confidence 8999999887653 689999999764321 0 1111 111221111 34667777787777
Q ss_pred EecC------CCCCCCchHHHHHHHHHHHhhhhcc
Q 010344 481 IVLE------FPRTASNKLLRRVLKDQLKHELSVR 509 (512)
Q Consensus 481 ~~~~------iP~t~~GKi~r~~l~~~~~~~~~~~ 509 (512)
+... =-.||+-|++|..+.+.|+++|+.-
T Consensus 651 l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~m 685 (691)
T KOG1256|consen 651 LLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDEL 685 (691)
T ss_pred EecccccccCCccchhhhhhhHHHHHHHHHHHHHH
Confidence 7532 2368999999999999999999863
No 71
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3.3e-60 Score=486.53 Aligned_cols=447 Identities=17% Similarity=0.125 Sum_probs=338.3
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCC--------cCHHHHHHHHHhcCccEEEeccc
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADS--------FAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--------~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
.++++|++|.+. ++||+|+++++|++++++++|||+++|+++++ ++. ...+++.+++.+++++++|++..
T Consensus 40 ~~~~lA~~L~~~-~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~ 117 (525)
T PRK05851 40 RAENVAARLLDR-DRPGAVGLVGEPTVELVAAIQGAWLAGAAVSI-LPGPVRGADDGRWADATLTRFAGIGVRTVLSHGS 117 (525)
T ss_pred HHHHHHHHHHhc-CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCcC-CCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHH
Confidence 478899999888 99999999999999999999999999998654 332 22355667899999999999874
Q ss_pred hhccCccccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010344 74 ILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTG 153 (512)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 153 (512)
.. ..+..... .. .+. .+...... . ... ......++++++++|||||||
T Consensus 118 ~~---------~~~~~~~~-~~-~~~---------------~~~~~~~~--~--~~~--~~~~~~~~d~a~i~~TSGTTG 165 (525)
T PRK05851 118 HL---------ERLRAVDS-SV-TVH---------------DLATAAHT--N--RSA--SLTPPDSGGPAVLQGTAGSTG 165 (525)
T ss_pred HH---------HHHHHhhc-cc-ccc---------------cccccccc--c--ccc--cCCCCCCCCeEEEEeCCCCCC
Confidence 21 11111100 00 000 00000000 0 000 001235688999999999999
Q ss_pred CCceEEecCchhHHHHHHhhcccccc-CCcEEEecCCccchhhhHHHHhhhccCceEEEecCC-C--chhhHHHHHHhcC
Q 010344 154 EPKAIPWTQLSPIRCAAEAWGHIDMK-VGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS-P--LERSFGKFVQDSG 229 (512)
Q Consensus 154 ~pK~v~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~-~--~~~~~~~~l~~~~ 229 (512)
.||||+++|.++.+++......+++. ++|+++++.|++|.+++..++.+++.|+++++.+.. + ++..+++.+++++
T Consensus 166 ~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~ 245 (525)
T PRK05851 166 TPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSR 245 (525)
T ss_pred CCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhC
Confidence 99999999999999888877778888 899999999999999998888999999999997531 2 4678999999999
Q ss_pred ceEEecchHHHHHHHccC-CCCCCCcCceeEEEeecCCCCchhhHHHHHhh--CC---CCeeeecCCccccceecccCCC
Q 010344 230 VSVLGTVPSLVKAWKNTN-CLQGLDWTKIRSFASTGETSNVDDDLWLASKA--YY---KPIIECCGGTELASSYIQGSML 303 (512)
Q Consensus 230 ~t~l~~~P~~~~~l~~~~-~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~--~~---~~i~~~yG~tE~~~~~~~~~~~ 303 (512)
+|.+...|.++..+.+.. .....+++++|.+++||+++++++.+.+.+.+ .+ .++++.||+||++..+......
T Consensus 246 ~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~ 325 (525)
T PRK05851 246 ATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPG 325 (525)
T ss_pred CeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCC
Confidence 998866555555443322 12345678999999999999999988887642 12 3599999999998655432111
Q ss_pred --------------CCCcccccccccCCccEEEeCCCC-CCCCCCCCccccccc-ccccccccccccccCcceeEEecCC
Q 010344 304 --------------QPQAFGAFSTATMTTGFVILDELG-VPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMP 367 (512)
Q Consensus 304 --------------~~~~~~~~G~p~~~~~~~i~d~~~-~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (512)
.....+++|+|+++++++|+|+++ .+++.|+ .|||++ ++..+.+ |+++ +
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~--~GEl~v~g~~~~~G------------Y~~~-~ 390 (525)
T PRK05851 326 IGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGRE--IGEIEIRGASMMSG------------YLGQ-A 390 (525)
T ss_pred CCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCC--eEEEEEecCchhhc------------cccC-C
Confidence 012346899999999999999776 4688898 699999 5544432 3322 2
Q ss_pred cccCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEec
Q 010344 368 IYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLK 447 (512)
Q Consensus 368 ~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~ 447 (512)
..+.++||+|||+|+++ +|+++++||.||+||++|++|+|.+||++|. .||+|.+++|++.+++..+ +.+.++|+..
T Consensus 391 ~~~~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~-~~p~V~~~~vv~~~~~~~~-~~~~~~v~~~ 467 (525)
T PRK05851 391 PIDPDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAA-QVRGVREGAVVAVGTGEGS-ARPGLVIAAE 467 (525)
T ss_pred ccCCCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHH-hCCCcccceEEEEEecCCC-CceeEEEEEE
Confidence 23446799999999996 7999999999999999999999999999998 8999999999999887777 6777766654
Q ss_pred CCCCCCcHHHHHHHHHHHHHhccCCccceeeEEEec--CCCCCCCchHHHHHHHHHHHh
Q 010344 448 KGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVL--EFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 448 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~--~iP~t~~GKi~r~~l~~~~~~ 504 (512)
.. . .+.+++.+++++++...+ ++.|..+++++ +||+|++||++|+.|++.+++
T Consensus 468 ~~-~-~~~~~~~~~~~~~l~~~l--~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 468 FR-G-PDEAGARSEVVQRVASEC--GVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred ec-C-cchHHHHHHHHHHHHHHh--CCCccEEEEECCCCcCcCcchHHHHHHHHHHHHh
Confidence 21 1 455667777777776554 28899999998 899999999999999998864
No 72
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2.2e-59 Score=480.97 Aligned_cols=464 Identities=17% Similarity=0.203 Sum_probs=363.4
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+.++++++|||+++|++++++++.++.+++.+++++++++.++++...
T Consensus 46 ~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~------ 119 (517)
T PRK08008 46 EINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQF------ 119 (517)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecch------
Confidence 478999999999 9999999999999999999999999999999999999999999999999999999999743
Q ss_pred ccchhhHHhcCC--CceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVAEAGP--LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
.+.+..+..... .+...+..... . ......+++++...... . ........++++++++|||||||.||+|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v 191 (517)
T PRK08008 120 YPMYRQIQQEDATPLRHICLTRVAL-P---ADDGVSSFTQLKAQQPA---T-LCYAPPLSTDDTAEILFTSGTTSRPKGV 191 (517)
T ss_pred hHHHHHHHhhccccCcEEEEecCCC-c---ccccccCHHHHhccCCc---c-ccccCCCCCCCeEEEEECCCCCCCCcEE
Confidence 233333333221 11222211110 0 11233445554433221 0 0112234568899999999999999999
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
+++|.++............+..++++++.+|++|..+.. .++.++..|+++++.+ ..+++.+++.++++++|++.++|
T Consensus 192 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 270 (517)
T PRK08008 192 VITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLE-KYSARAFWGQVCKYRATITECIP 270 (517)
T ss_pred EEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEcc-ccCHHHHHHHHHHcCCcEEechH
Confidence 999999976544333334567899999999999986654 4788999999999976 56789999999999999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCC
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMT 317 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~ 317 (512)
.+++.++............++.+.+++ +++++....+.+.+ +.++++.||+||++..++..........+++|.|+++
T Consensus 271 ~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g 348 (517)
T PRK08008 271 MMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERF-GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFC 348 (517)
T ss_pred HHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHh-CCeEEeeccccccccccccCCccccccCCccccCCCC
Confidence 999998866544334456788777654 77888888888776 7899999999999875554444344456789999999
Q ss_pred ccEEEeCCCCCCCCCCCCccccccccc----ccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEe
Q 010344 318 TGFVILDELGVPYPDDQPCVGEVGLFP----LYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQG 393 (512)
Q Consensus 318 ~~~~i~d~~~~~~~~g~~~~Gel~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~g 393 (512)
++++|+|+++++++.|+ .|||+++. .+..+ ++.+++.+...+ ..++||+|||+|+++++|+++++|
T Consensus 349 ~~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~~~~g--y~~~~~~~~~~~------~~~g~~~TGDl~~~~~~g~~~~~G 418 (517)
T PRK08008 349 YEAEIRDDHNRPLPAGE--IGEICIKGVPGKTIFKE--YYLDPKATAKVL------EADGWLHTGDTGYVDEEGFFYFVD 418 (517)
T ss_pred cEEEEECCCCCCCCCCC--cceEEEeCCCCcchhhh--HhCChHHHhhcc------cCCCCeeccceEEECCCCcEEEee
Confidence 99999999999999999 69999942 33322 222344444444 235799999999999999999999
Q ss_pred ccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCc
Q 010344 394 RADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPL 473 (512)
Q Consensus 394 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 473 (512)
|.+|+|+.+|++|+|.+||+++. .++.|.+++|++.+++..+ +.+.++|+++++.. .+.+++.++++ +++++|
T Consensus 419 R~~d~i~~~G~~i~p~~iE~~l~-~~~~v~~~~v~g~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~~~----~~l~~~ 491 (517)
T PRK08008 419 RRCNMIKRGGENVSCVELENIIA-THPKIQDIVVVGIKDSIRD-EAIKAFVVLNEGET-LSEEEFFAFCE----QNMAKF 491 (517)
T ss_pred cccceEEeCCEEECHHHHHHHHH-hCCceeeEEEEccCCCCCC-ceEEEEEEECCCCC-CCHHHHHHHHH----hhcccc
Confidence 99999999999999999999998 8999999999999988777 78999999987654 55555555554 678899
Q ss_pred cceeeEEEecCCCCCCCchHHHHHHH
Q 010344 474 FKVSLVKIVLEFPRTASNKLLRRVLK 499 (512)
Q Consensus 474 ~~p~~i~~~~~iP~t~~GKi~r~~l~ 499 (512)
++|..++++++||+|++||++|+.|+
T Consensus 492 ~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 492 KVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred cCCcEEEEeccCCCCCccceehhhcC
Confidence 99999999999999999999999864
No 73
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=5.6e-60 Score=534.49 Aligned_cols=456 Identities=21% Similarity=0.240 Sum_probs=369.9
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++++++++++++.......
T Consensus 492 ~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~-- 569 (1296)
T PRK10252 492 QVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRF-- 569 (1296)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhc--
Confidence 378999999999 99999999999999999999999999999999999999999999999999999999987432111
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.. .. ..... .+........ ..+.....++++++++|||||||.||||++
T Consensus 570 ----~~----~~-~~~~~----------------~~~~~~~~~~------~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~ 618 (1296)
T PRK10252 570 ----AD----VP-DLTSL----------------CYNAPLAPQG------AAPLQLSQPHHTAYIIFTSGSTGRPKGVMV 618 (1296)
T ss_pred ----cc----CC-Cceee----------------eccccccccc------CCCCCCCCCCCeEEEEECCCCCCCCCEEEe
Confidence 00 00 00000 0000000000 001112356789999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC--CchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS--PLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|+++.+.+.+....+++.++|++++..|++|..+++.++.+|..|+++++.+.. .++..+++.++++++|++.++|+
T Consensus 619 ~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps 698 (1296)
T PRK10252 619 GQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPS 698 (1296)
T ss_pred ccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHH
Confidence 9999999998888889999999999999999999988899999999999997643 36788999999999999999999
Q ss_pred HHHHHHccCCCC--CCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC------CCcccc
Q 010344 239 LVKAWKNTNCLQ--GLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ------PQAFGA 310 (512)
Q Consensus 239 ~~~~l~~~~~~~--~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~------~~~~~~ 310 (512)
++..+++..... ...++++|.+++|||++++++.+.+.+.+ ++++++.||+||++...+...... .....+
T Consensus 699 ~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1296)
T PRK10252 699 MLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVP 777 (1296)
T ss_pred HHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCC
Confidence 999887653222 23467899999999999999999998766 788999999999987554433221 223467
Q ss_pred cccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeE
Q 010344 311 FSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYI 389 (512)
Q Consensus 311 ~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l 389 (512)
+|.|++++.++|+|+++++++.|. .|||+| +++...+ |+.+++.+...|..+++..+.+||+|||+|++++||++
T Consensus 778 iG~p~~~~~~~i~d~~~~~~~~g~--~Gel~i~g~~~~~G--Y~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l 853 (1296)
T PRK10252 778 IGYPVWNTGLRILDARMRPVPPGV--AGDLYLTGIQLAQG--YLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAV 853 (1296)
T ss_pred cccccCCCEEEEECCCCCCCCCCC--ceEEEecccccchh--hCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcE
Confidence 999999999999999999999999 699999 5555543 23456667777777777778899999999999999999
Q ss_pred EEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeC----CCCCC-CceEEEEEEecCCCCCCcHHHHHHHHHH
Q 010344 390 IVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVS----PAGGG-PEVLVICVVLKKGFTSQPVDKLKMIFSK 464 (512)
Q Consensus 390 ~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~----~~~~~-~~~~~a~v~~~~~~~~~~~~~l~~~~~~ 464 (512)
+++||.||+||++|++|+|.|||++|. .||+|.+++|+... +...+ ...++++|+..++.. .+.+++. +
T Consensus 854 ~~~GR~d~~ik~~G~ri~~~eIE~~l~-~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~-~~~~~l~----~ 927 (1296)
T PRK10252 854 EYLGRSDDQLKIRGQRIELGEIDRAMQ-ALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLP-LDTSALQ----A 927 (1296)
T ss_pred EEecccCCeEEEeeEEecHHHHHHHHH-hCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCC-CCHHHHH----H
Confidence 999999999999999999999999998 89999999877542 11122 147999999876543 4555554 4
Q ss_pred HHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHH
Q 010344 465 AIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQ 501 (512)
Q Consensus 465 ~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~ 501 (512)
+++++|+.|++|..++.+++||+|++||++|++|++.
T Consensus 928 ~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 928 QLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred HHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 5557899999999999999999999999999999763
No 74
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-59 Score=478.32 Aligned_cols=455 Identities=20% Similarity=0.195 Sum_probs=358.6
Q ss_pred cHHHHHHHHhcc--CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCc
Q 010344 2 SYRLVANALDTM--FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 79 (512)
Q Consensus 2 ~~~~~a~~L~~~--i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~ 79 (512)
.++++|++|++. ++++++|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++++...
T Consensus 37 ~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---- 112 (529)
T PRK07867 37 GSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHA---- 112 (529)
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHH----
Confidence 478999999996 89999999999999999999999999999999999999999999999999999999997532
Q ss_pred cccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 80 KFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
..+..+. ....++.. ....|.+++..... .........++++++++|||||||.||+|+
T Consensus 113 --~~~~~~~----~~~~~~~~-----------~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~ 171 (529)
T PRK07867 113 --ELLDGLD----PGVRVINV-----------DSPAWADELAAHRD----AEPPFRVADPDDLFMLIFTSGTSGDPKAVR 171 (529)
T ss_pred --HHHHhhc----cCceEEEe-----------ccccHHHHhcccCC----CCCCcccCCccceEEEEECCCCCCCCcEEE
Confidence 1111111 11122211 11135554432221 111223346788999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+||+++..+.......+++..+|++++..|++|..++.. ++.++..|+++++.+ ..++..+++.++++++|++.++|+
T Consensus 172 ~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~p~ 250 (529)
T PRK07867 172 CTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRR-KFSASGFLPDVRRYGATYANYVGK 250 (529)
T ss_pred ecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecC-CCCHHHHHHHHHHhCCeEEeccHH
Confidence 999999888888777888899999999999999999865 667888999988865 567899999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
.+..++..........+++|. ++||+.+++.. ..+.+.+ +.++++.||+||++....... ....+++|.|.++
T Consensus 251 ~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~~---~~~~~~~g~~~~~- 323 (529)
T PRK07867 251 PLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRTP---DTPPGALGPLPPG- 323 (529)
T ss_pred HHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccCC---CCCCCCcCCCCCC-
Confidence 999887655433333457874 56888887664 5566666 788999999999986543222 2234678999998
Q ss_pred cEEEeC-CCCCCCCCCC----------Cccccccc-c-cccccccccccccCcceeEEecCCcccCceeeeecceEEEeC
Q 010344 319 GFVILD-ELGVPYPDDQ----------PCVGEVGL-F-PLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTV 385 (512)
Q Consensus 319 ~~~i~d-~~~~~~~~g~----------~~~Gel~v-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~ 385 (512)
++++| +++.+++.|+ ...|||++ + +..+.+ ++.+++.+...| .++||+|||+|++++
T Consensus 324 -~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~g--y~~~~~~~~~~~-------~~g~~~TGD~~~~~~ 393 (529)
T PRK07867 324 -VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEG--YYNDPEADAERM-------RGGVYWSGDLAYRDA 393 (529)
T ss_pred -EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCccccc--ccCChHhhhhhh-------cCCeEeeccEEEEeC
Confidence 67777 5688888876 01399988 4 333322 112222222222 247999999999999
Q ss_pred CCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHH
Q 010344 386 GGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKA 465 (512)
Q Consensus 386 ~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~ 465 (512)
+|++++.||.||+|+++|++|+|.+||++|. ++|+|.+++|++.+++..+ +.+.+++++.++.. .+.+++.+++++
T Consensus 394 ~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~V~g~~~~~~g-~~~~a~vv~~~~~~-~~~~~l~~~~~~- 469 (529)
T PRK07867 394 DGYAYFAGRLGDWMRVDGENLGTAPIERILL-RYPDATEVAVYAVPDPVVG-DQVMAALVLAPGAK-FDPDAFAEFLAA- 469 (529)
T ss_pred CCcEEEeccccCeEEECCEEeCHHHHHHHHH-hCCCeeEEEEEeccCCCCC-eeEEEEEEECCCCC-CCHHHHHHHHHh-
Confidence 9999999999999999999999999999998 8999999999999998888 89999999987765 777788777754
Q ss_pred HHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 466 IQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 466 ~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+..|++|+.|..|+++++||+|++||++|++|+++...
T Consensus 470 -~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 470 -QPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVD 507 (529)
T ss_pred -hccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCC
Confidence 24699999999999999999999999999999998754
No 75
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-59 Score=478.07 Aligned_cols=444 Identities=22% Similarity=0.218 Sum_probs=360.5
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++..+.+++..+++.++++.+++++....
T Consensus 36 ~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~---- 111 (483)
T PRK03640 36 AVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEA---- 111 (483)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhH----
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999874311
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
..... ....+.++...... ..........+++++++|||||||.||+|++
T Consensus 112 -----~~~~~---------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~ 161 (483)
T PRK03640 112 -----KLIPG---------------------ISVKFAELMNGPKE----EAEIQEEFDLDEVATIMYTSGTTGKPKGVIQ 161 (483)
T ss_pred -----HHhhh---------------------ccccHHHHhhcccc----cCCCCCCCCCCCeEEEEeCCCcCCCCcEEEE
Confidence 00000 00123333332111 1112223456789999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
||.++...+......+++.++|++++.+|++|..++..++.++..|+++++.+ ..++..+++.++++++|++.++|+++
T Consensus 162 s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~ 240 (483)
T PRK03640 162 TYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISVVSTML 240 (483)
T ss_pred ecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHH
Confidence 99999887777666788899999999999999999888889999999999976 56789999999999999999999999
Q ss_pred HHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC-CCCCcccccccccCCcc
Q 010344 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM-LQPQAFGAFSTATMTTG 319 (512)
Q Consensus 241 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~~~~~~~~~G~p~~~~~ 319 (512)
..|++..... ....++|.+++||+++++.+.+.+.+. ++++++.||+||++........ ......+++|.|+++++
T Consensus 241 ~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~ 317 (483)
T PRK03640 241 QRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCE 317 (483)
T ss_pred HHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccccccCCCcccccCCcE
Confidence 9998664332 234689999999999999999888763 7889999999998764333222 23345688999999999
Q ss_pred EEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCce
Q 010344 320 FVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDT 398 (512)
Q Consensus 320 ~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~ 398 (512)
++|.|+ +++++.|+ .|||++ ++..+.+|. .+++.+...| .++||+|||++++++||++++.||.+|+
T Consensus 318 ~~i~~~-~~~~~~g~--~Gel~v~g~~~~~gy~--~~~~~~~~~~-------~~~~~~tGDl~~~~~~g~l~~~GR~~~~ 385 (483)
T PRK03640 318 LKIEKD-GVVVPPFE--EGEIVVKGPNVTKGYL--NREDATRETF-------QDGWFKTGDIGYLDEEGFLYVLDRRSDL 385 (483)
T ss_pred EEEecC-CCcCCCCC--ceEEEEECcchhhhhc--CCHHHHHHHH-------hcCCeeccceEEEcCCCCEEEeecccCe
Confidence 999986 48899999 699999 555443321 1222222212 2469999999999999999999999999
Q ss_pred eeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceee
Q 010344 399 MNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSL 478 (512)
Q Consensus 399 i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~ 478 (512)
+|.+|.+|+|.+||+.+. .+++|.++++++.+++..+ +.+.++++..+. .+.+++.+ +++++|++|++|..
T Consensus 386 i~~~G~~v~~~~ie~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~~~~~~~~---~~~~~l~~----~~~~~l~~~~~p~~ 456 (483)
T PRK03640 386 IISGGENIYPAEIEEVLL-SHPGVAEAGVVGVPDDKWG-QVPVAFVVKSGE---VTEEELRH----FCEEKLAKYKVPKR 456 (483)
T ss_pred EEeCCEEECHHHHHHHHH-hCCCeeEEEEEeCCCcccC-CceEEEEEeCCC---CCHHHHHH----HHHHhccCCCCCcE
Confidence 999999999999999998 8999999999999887777 778887875443 45555554 45577889999999
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 479 VKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 479 i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
|+++++||+|++||++|+.|++++++
T Consensus 457 i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 457 FYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EEEeCCCCCCCccceeHHHHHHHHhh
Confidence 99999999999999999999999875
No 76
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-59 Score=479.76 Aligned_cols=459 Identities=18% Similarity=0.151 Sum_probs=352.4
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++.+++++++++++...
T Consensus 33 ~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 107 (501)
T PRK13390 33 DSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALD----- 107 (501)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhh-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999986421
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
......... ....+.. ... ......+++....... .....+++++++|||||||.||+|++
T Consensus 108 -~~~~~~~~~--~~~~~~~-~~~------~~~~~~~~~~~~~~~~---------~~~~~~~~a~i~~TSGTTG~PKgV~~ 168 (501)
T PRK13390 108 -GLAAKVGAD--LPLRLSF-GGE------IDGFGSFEAALAGAGP---------RLTEQPCGAVMLYSSGTTGFPKGIQP 168 (501)
T ss_pred -hHHHHhhhc--cceEEEe-cCc------ccccccHHHHhcccCC---------CCCCCcccEEEEeCCCCCCCCCEEEe
Confidence 011111000 0111110 000 0111234333221110 01122347999999999999999996
Q ss_pred --cCchhHHHH----HHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 161 --TQLSPIRCA----AEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 161 --s~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
+|.++.... ......+.+..++++++.+|++|.+++...+..+..|+++++.+ ..++..+++.|+++++|++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 247 (501)
T PRK13390 169 DLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAK-RFDAQATLGHVERYRITVTQ 247 (501)
T ss_pred eccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcC-CcCHHHHHHHHHHcCCeEEE
Confidence 455554321 11123467788999999999999988765555667899988865 56789999999999999999
Q ss_pred cchHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccc
Q 010344 235 TVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFS 312 (512)
Q Consensus 235 ~~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G 312 (512)
++|+++..|+.... ....+++++|.++.+|+++++++.+.+.+.+ +.++++.||+||++++............+++|
T Consensus 248 ~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G 326 (501)
T PRK13390 248 MVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVG 326 (501)
T ss_pred ecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEecchhhccCCCCcC
Confidence 99999999886542 2345678999999999999999999988876 67899999999998654332222223457899
Q ss_pred cccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEE
Q 010344 313 TATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIV 391 (512)
Q Consensus 313 ~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i 391 (512)
+|+++ .++|+|+++++++.|+ .|||++ ++..+.+ ++.+++.+...+. ..+++||+|||+|++|++|++++
T Consensus 327 ~~~~g-~~~i~d~~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~t~~~~~----~~~~~w~~tGDl~~~~~dg~l~~ 397 (501)
T PRK13390 327 RSVLG-DLHICDDDGNELPAGR--IGTVYFERDRLPFR--YLNDPEKTAAAQH----PAHPFWTTVGDLGSVDEDGYLYL 397 (501)
T ss_pred Ccccc-eEEEECCCCCCCCCCC--ceEEEEecCCcccc--ccCChhhhHHhhc----cCCCceEEcCceEEECCCCeEEE
Confidence 99999 6999999999999999 699999 4444332 2223333332221 12357999999999999999999
Q ss_pred EeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccC
Q 010344 392 QGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLN 471 (512)
Q Consensus 392 ~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~ 471 (512)
.||.||+|+++|++|+|.+||++|. .||.|.++++++.+++..+ +.+++++++.++.. .+ +++.+.+.+++.++|+
T Consensus 398 ~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~~~-e~~~~~v~~~~~~~-~~-~~~~~~l~~~~~~~l~ 473 (501)
T PRK13390 398 ADRKSFMIISGGVNIYPQETENALT-MHPAVHDVAVIGVPDPEMG-EQVKAVIQLVEGIR-GS-DELARELIDYTRSRIA 473 (501)
T ss_pred eeccccceeECCeeeCHHHHHHHHH-hCCCeeEEEEEeccCcccC-ceeEEEEEecCCCC-cc-hhhHHHHHHHHHHhcc
Confidence 9999999999999999999999998 8999999999999998888 89999999876543 22 2344567777778899
Q ss_pred CccceeeEEEecCCCCCCCchHHHHHHH
Q 010344 472 PLFKVSLVKIVLEFPRTASNKLLRRVLK 499 (512)
Q Consensus 472 ~~~~p~~i~~~~~iP~t~~GKi~r~~l~ 499 (512)
.|+.|..++++++||+|++||++|++|+
T Consensus 474 ~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 474 HYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred cCCCCcEEEEeccCCCCCccceehhhcC
Confidence 9999999999999999999999999874
No 77
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=7.3e-60 Score=493.07 Aligned_cols=479 Identities=18% Similarity=0.166 Sum_probs=354.0
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+|+++|++||++++|||+++|++++|+++.++.+++.+++++++++++|+++...
T Consensus 85 ~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~----- 159 (660)
T PLN02430 85 EVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKI----- 159 (660)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHH-----
Confidence 368999999999 99999999999999999999999999999999999999999999999999999999986421
Q ss_pred ccchhhHHhcCCCceEEeeccCCccc-----ccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVG-----IQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~p 155 (512)
...+.......+....++........ ........+|++++..+... .. ......++++++++|||||||.|
T Consensus 160 ~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~d~a~iiyTSGTTG~P 235 (660)
T PLN02430 160 KELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKEN--PS--ETNPPKPLDICTIMYTSGTSGDP 235 (660)
T ss_pred HHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccC--CC--CCCCcCcCceEEEEECCCCCCCC
Confidence 01111111111111112211110000 00011235678877654421 11 11223578999999999999999
Q ss_pred ceEEecCchhHHHHHHhhc---c--ccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCc
Q 010344 156 KAIPWTQLSPIRCAAEAWG---H--IDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGV 230 (512)
Q Consensus 156 K~v~~s~~~~~~~~~~~~~---~--~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~ 230 (512)
|||++||+++...+..... . .++.++|++++++|++|.++....+.++..|+++++... ++..+++.|++++|
T Consensus 236 KGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~--~~~~l~~~l~~~~p 313 (660)
T PLN02430 236 KGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHG--DLNALRDDLMELKP 313 (660)
T ss_pred CEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCC--ChhhHHHHHHHhCC
Confidence 9999999999887765432 1 246789999999999999998776667899999988753 45789999999999
Q ss_pred eEEecchHHHHHHHccCC-------------------------------C--CC-CC-----------cCceeEEEeecC
Q 010344 231 SVLGTVPSLVKAWKNTNC-------------------------------L--QG-LD-----------WTKIRSFASTGE 265 (512)
Q Consensus 231 t~l~~~P~~~~~l~~~~~-------------------------------~--~~-~~-----------l~~l~~i~~~G~ 265 (512)
|++.++|.+++.+.+... . .. .+ .+++|.+++||+
T Consensus 314 t~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga 393 (660)
T PLN02430 314 TLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGA 393 (660)
T ss_pred cEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCC
Confidence 999999999988764210 0 00 00 158999999999
Q ss_pred CCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeC--CCC-CCCCCCCCccccccc
Q 010344 266 TSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILD--ELG-VPYPDDQPCVGEVGL 342 (512)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d--~~~-~~~~~g~~~~Gel~v 342 (512)
++++++.++++ .+++.++++.||+||+++..+..........+++|.|.+++++++.| +.| .+++.+. .|||++
T Consensus 394 ~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~--~GEi~v 470 (660)
T PLN02430 394 PLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPP--RGEICV 470 (660)
T ss_pred CCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCC--cceEEe
Confidence 99999876655 44457899999999998765544333334568999999999999986 333 3455554 599999
Q ss_pred -ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceeee-cceecchHHHHHhhhcCCc
Q 010344 343 -FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDGADE 420 (512)
Q Consensus 343 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~ 420 (512)
++..+.+| +.+++.+...| .+|||+|||+|++|+||+++|.||.||+||. +|++|+|.+||+++. .||
T Consensus 471 rg~~v~~GY--~~~~e~t~~~~-------~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~-~~p 540 (660)
T PLN02430 471 RGKCLFSGY--YKNPELTEEVM-------KDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYG-QNP 540 (660)
T ss_pred cCCCccccc--cCChHHhhhhh-------hccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHh-cCC
Confidence 55555432 22343333333 2579999999999999999999999999995 799999999999998 899
Q ss_pred ceeeeeEEeeCCCCCCCceEEEEEEecCCC----------C-C----CcHHHHHHHHHHHH-----HhccCCccceeeEE
Q 010344 421 SILETAAISVSPAGGGPEVLVICVVLKKGF----------T-S----QPVDKLKMIFSKAI-----QRNLNPLFKVSLVK 480 (512)
Q Consensus 421 ~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~----------~-~----~~~~~l~~~~~~~~-----~~~l~~~~~p~~i~ 480 (512)
.|.+++|++.. .+ +.++|+|+++++. . . .+..++++.+.+.+ +++|+.|.+++.|.
T Consensus 541 ~V~~~~V~G~~---~~-~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~ 616 (660)
T PLN02430 541 IVEDIWVYGDS---FK-SMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVI 616 (660)
T ss_pred CeeEEEEEecC---Cc-ceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEE
Confidence 99999999843 23 6899999986421 0 0 11223444444433 24699999999999
Q ss_pred EecC-C-----CCCCCchHHHHHHHHHHHhhhhc
Q 010344 481 IVLE-F-----PRTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 481 ~~~~-i-----P~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
+.++ + .+|+++|++|+.+.+.|++++++
T Consensus 617 l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ 650 (660)
T PLN02430 617 LETKPFDVERDLVTATLKKRRNNLLKYYQVEIDE 650 (660)
T ss_pred EECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 8764 2 48999999999999999988875
No 78
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-59 Score=480.29 Aligned_cols=441 Identities=17% Similarity=0.133 Sum_probs=350.7
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++...
T Consensus 69 ~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~----- 143 (516)
T PRK13383 69 ATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFA----- 143 (516)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHH-----
Confidence 378999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
..+... ......++. .. ..... . ...+...++.++++|||||||.||+|++
T Consensus 144 -~~~~~~----~~~~~~~~~-----------~~---~~~~~---~-------~~~p~~~~~~~~il~TSGTTG~PK~v~~ 194 (516)
T PRK13383 144 -ERIAGA----DDAVAVIDP-----------AT---AGAEE---S-------GGRPAVAAPGRIVLLTSGTTGKPKGVPR 194 (516)
T ss_pred -HHHHhh----hcceEEecc-----------ch---hhhhc---C-------CCCCCCCCCCcEEEECCCCCCCCCeeee
Confidence 111111 111112110 00 00000 0 0001123456799999999999999999
Q ss_pred cCchhH--HHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPI--RCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|.... .........+++.++|+++...|++|.+++..++.++..|+++++.. ..+++.+++.++++++|.+.++|+
T Consensus 195 s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 273 (516)
T PRK13383 195 APQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHR-HFDAEAALAQASLHRADAFTAVPV 273 (516)
T ss_pred cchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECC-CCCHHHHHHHHHHhCCcEEEecHH
Confidence 997432 11222233467889999999999999999988888999999998754 567899999999999999999999
Q ss_pred HHHHHHccCCC--CCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccC
Q 010344 239 LVKAWKNTNCL--QGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATM 316 (512)
Q Consensus 239 ~~~~l~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~ 316 (512)
++..|...... ...+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++..............+++|.|++
T Consensus 274 ~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~ 352 (516)
T PRK13383 274 VLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALATPADLRDAPETVGKPVA 352 (516)
T ss_pred HHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-CchhhhcccccccccceeccccccccCCCcccCCCC
Confidence 99998765431 234578999999999999999999999888 678999999999987554443333345678999999
Q ss_pred CccEEEeCCCCCCCCCCCCcccccccc-cccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEecc
Q 010344 317 TTGFVILDELGVPYPDDQPCVGEVGLF-PLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRA 395 (512)
Q Consensus 317 ~~~~~i~d~~~~~~~~g~~~~Gel~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~ 395 (512)
+++++|+|+++++++.|+ .|||+++ +....+ |.+.. .....+|||+|||+|++|++|++++.||.
T Consensus 353 ~~~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~~---Y~~~~---------~~~~~~g~~~TGDl~~~d~~G~l~i~GR~ 418 (516)
T PRK13383 353 GCPVRILDRNNRPVGPRV--TGRIFVGGELAGTR---YTDGG---------GKAVVDGMTSTGDMGYLDNAGRLFIVGRE 418 (516)
T ss_pred CcEEEEECCCCCCCCCCC--ceEEEEecCccccc---ccCCc---------hhheecCceecceeEEEcCCccEEEeccc
Confidence 999999999999999998 6999994 333322 22221 11123579999999999999999999999
Q ss_pred CceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccc
Q 010344 396 DDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFK 475 (512)
Q Consensus 396 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 475 (512)
+|+|+++|++|+|.+||++|. ++|.|.++++++.++...+ +.+.++|+++++.. .+.+++.++ +.+++++|+.
T Consensus 419 ~~~i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~g-~~~~~~v~~~~~~~-~~~~~l~~~----~~~~l~~~~~ 491 (516)
T PRK13383 419 DDMIISGGENVYPRAVENALA-AHPAVADNAVIGVPDERFG-HRLAAFVVLHPGSG-VDAAQLRDY----LKDRVSRFEQ 491 (516)
T ss_pred cceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-ceEEEEEEECCCCC-CCHHHHHHH----HHHhcccCCC
Confidence 999999999999999999998 8999999999999988878 89999999876544 455555444 4567788999
Q ss_pred eeeEEEecCCCCCCCchHHHHHHH
Q 010344 476 VSLVKIVLEFPRTASNKLLRRVLK 499 (512)
Q Consensus 476 p~~i~~~~~iP~t~~GKi~r~~l~ 499 (512)
|..|.++++||+|++||++|+.|+
T Consensus 492 p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 492 PRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred CcEEEEeCCCCCCCCCcCcHHHhC
Confidence 999999999999999999999874
No 79
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-59 Score=483.82 Aligned_cols=471 Identities=22% Similarity=0.246 Sum_probs=364.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++++++...
T Consensus 57 ~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~----- 131 (557)
T PRK07059 57 LSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFA----- 131 (557)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCCceEEeeccCCc------------------ccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDD------------------VGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSV 142 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (512)
..+..+..........+...... ......++...+.+++..... .........++++
T Consensus 132 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 206 (557)
T PRK07059 132 -TTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGAR----QTFKPVKLGPDDV 206 (557)
T ss_pred -HHHHHhhcccCCceeEEecccccccccccccccccccccccccccCCCCcccHHHHhhccCC----CCCCCCCCCcCce
Confidence 12222222111111111100000 000011223445555443321 1112233567889
Q ss_pred EEEEecCCCCCCCceEEecCchhHHHHHHhhccc----cc---cCCcEEEecCCccchhhhHH-HHhhhccCceEEEecC
Q 010344 143 INILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHI----DM---KVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHG 214 (512)
Q Consensus 143 ~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~----~~---~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~ 214 (512)
++++|||||||.||+|+++|.++..++......+ .. .....+++.+|++|.+++.. .+.++..|++.++.+.
T Consensus 207 a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~ 286 (557)
T PRK07059 207 AFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPN 286 (557)
T ss_pred EEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecC
Confidence 9999999999999999999999887654332221 11 12346788899999988754 6678888998888775
Q ss_pred CCchhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCcccc
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELA 294 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~ 294 (512)
..++..+++.++++++|.+.++|.++..++........+++++|.++.||+++++.+.+.+.+.+ ++++++.||+||++
T Consensus 287 ~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~ 365 (557)
T PRK07059 287 PRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETS 365 (557)
T ss_pred CcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCeeecccccccc
Confidence 56778899999999999999999999999887655566788999999999999999999888877 78999999999998
Q ss_pred ceecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCce
Q 010344 295 SSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMH 373 (512)
Q Consensus 295 ~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (512)
.++...........+++|.|+++++++|+|+++++++.|+ .|||++ ++..+.+| +.+++.+...+ ..++
T Consensus 366 ~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~--~Gel~v~g~~~~~gY--~~~~~~~~~~~------~~~g 435 (557)
T PRK07059 366 PVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLGE--PGEICIRGPQVMAGY--WNRPDETAKVM------TADG 435 (557)
T ss_pred chhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCCC--ceEEEEeCCccchhh--hcCHHHHhhhc------ccCC
Confidence 8765544333344678999999999999999999999999 699999 44433321 12223332222 2457
Q ss_pred eeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCC
Q 010344 374 LRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQ 453 (512)
Q Consensus 374 ~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~ 453 (512)
||+|||+++++++|+++++||.+|+++++|++|+|.+||+++. .+|+|.+++|++.++...+ +.++++++..+.. .
T Consensus 436 ~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~-~~~~V~~~~v~~~~~~~~g-e~~~~~v~~~~~~--~ 511 (557)
T PRK07059 436 FFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVA-SHPGVLEVAAVGVPDEHSG-EAVKLFVVKKDPA--L 511 (557)
T ss_pred ceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHH-hCCceeEEEEEecccCCCC-eeEEEEEEeCCCC--C
Confidence 9999999999999999999999999999999999999999998 8999999999999988878 7888888865432 4
Q ss_pred cHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHH
Q 010344 454 PVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQ 501 (512)
Q Consensus 454 ~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~ 501 (512)
+.+++. +.+.++|++++.|..+.+++++|+|++||++|+.|+++
T Consensus 512 ~~~~l~----~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 512 TEEDVK----AFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred CHHHHH----HHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 444444 44556788999999999999999999999999999865
No 80
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-59 Score=481.69 Aligned_cols=456 Identities=20% Similarity=0.193 Sum_probs=352.2
Q ss_pred cHHHHHHHHhcc-C-CCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCc
Q 010344 2 SYRLVANALDTM-F-SKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 79 (512)
Q Consensus 2 ~~~~~a~~L~~~-i-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~ 79 (512)
.++++|++|.+. + ++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++++...
T Consensus 35 ~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~---- 110 (540)
T PRK13388 35 EAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHR---- 110 (540)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhh----
Confidence 368899999999 8 8999999999999999999999999999999999999999999999999999999987432
Q ss_pred cccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 80 KFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
..+..+. ......+.+. ...|.+++..... ..+.....++++++++|||||||.||+|+
T Consensus 111 --~~~~~~~-~~~~~~i~~~-------------~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~ 169 (540)
T PRK13388 111 --PLLDGLD-LPGVRVLDVD-------------TPAYAELVAAAGA-----LTPHREVDAMDPFMLIFTSGTTGAPKAVR 169 (540)
T ss_pred --HHHHhhc-ccCceEEEcc-------------chhhhhhhccccC-----cCCCCCCCCCCeEEEEECCCCCCCCCEEE
Confidence 1111110 0011111111 0123343321111 11112245789999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
++|.++..........+++..+|++++.+|++|..++.. ++.++..|+++++.+ ..++..+++.++++++|++..+|.
T Consensus 170 ~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~p~ 248 (540)
T PRK13388 170 CSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPA-KFSASGFLDDVRRYGATYFNYVGK 248 (540)
T ss_pred ecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECC-CCCHHHHHHHHHHhCCeEEEehHH
Confidence 999999888877777888999999999999999998865 556888999998854 567889999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
.+..++...........+++. .+ |+.++++....+.+.+ +.++++.||+||++.++.... ....+++|.|++++
T Consensus 249 ~l~~l~~~~~~~~~~~~~l~~-~~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~---~~~~~~vG~p~~g~ 322 (540)
T PRK13388 249 PLAYILATPERPDDADNPLRV-AF-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVREP---GTPPGSIGRGAPGV 322 (540)
T ss_pred HHHHHHhCCCCccccccceEE-EE-CCCCCHHHHHHHHHHh-CCceecccccccccceeecCC---CCCCCCCCCCCCCc
Confidence 999888654332222345664 33 5566778888888777 688999999999987654332 22357899999987
Q ss_pred cEE-----------EeCCCCCCCC-CCCCcccccccc--cccccccccccccCcceeEEecCCcccCceeeeecceEEEe
Q 010344 319 GFV-----------ILDELGVPYP-DDQPCVGEVGLF--PLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRT 384 (512)
Q Consensus 319 ~~~-----------i~d~~~~~~~-~g~~~~Gel~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~ 384 (512)
++. ++|++|+++. .+. .|||+++ +..+.+ ++.+++.+...| .++||+|||+|+++
T Consensus 323 ~i~~~~~~~~~~~~~~d~~g~~~~~~~~--~GEl~v~~g~~~~~g--Y~~~~~~t~~~~-------~~g~~~TGD~~~~~ 391 (540)
T PRK13388 323 AIYNPETLTECAVARFDAHGALLNADEA--IGELVNTAGAGFFEG--YYNNPEATAERM-------RHGMYWSGDLAYRD 391 (540)
T ss_pred EEEcCCCCccccceeccCccccccCCCc--ceEEEEecCCccccc--ccCChHHHHHHh-------hcCceeccceEEEc
Confidence 642 4455565553 344 6999994 333322 222233322222 24699999999999
Q ss_pred CCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHH
Q 010344 385 VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSK 464 (512)
Q Consensus 385 ~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~ 464 (512)
++|+++++||.+|+|+++|++|+|.+||++|. .+|+|.+++|++.+++..| +.+++++++.++.. .+.+++.++++.
T Consensus 392 ~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~g~~~~~~g-~~~~~~v~~~~~~~-~~~~~l~~~l~~ 468 (540)
T PRK13388 392 ADGWIYFAGRTADWMRVDGENLSAAPIERILL-RHPAINRVAVYAVPDERVG-DQVMAALVLRDGAT-FDPDAFAAFLAA 468 (540)
T ss_pred CCCcEEEeccCCceEEECCEEeCHHHHHHHHH-hCCCceEEEEEEccCCCCC-ceeEEEEEECCCCc-CCHHHHHHHHHh
Confidence 99999999999999999999999999999998 8999999999999988888 78888888877655 666777766643
Q ss_pred HHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 465 AIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 465 ~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
++.|++|+.|..++++++||+|++||++|++|+++....
T Consensus 469 --~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 469 --QPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred --hccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 246999999999999999999999999999999987554
No 81
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=7.6e-59 Score=475.83 Aligned_cols=467 Identities=20% Similarity=0.187 Sum_probs=365.3
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.+++++++++....
T Consensus 20 ~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~----- 94 (509)
T PRK12406 20 RAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAHADLL----- 94 (509)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEccchh-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCCceEEeeccCC----------cccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGD----------DVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSG 150 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 150 (512)
..+.+..+....++..... ...........+|+++...... ......+++++++||||
T Consensus 95 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 95 ----HGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP--------YDGPPVPQPQSMIYTSG 162 (509)
T ss_pred ----hhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCc--------cCCCCCCCceEEEECCC
Confidence 1111111111111100000 0000011233456655432111 11234678999999999
Q ss_pred CCCCCceEEecCchhH---HHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHh
Q 010344 151 TTGEPKAIPWTQLSPI---RCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQD 227 (512)
Q Consensus 151 tTG~pK~v~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~ 227 (512)
|||.||+|+++|.++. .........+++.+++++++..|++|..+....+.++..|+++++.+ ..+++.+++.+++
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~ 241 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQP-RFDPEELLQLIER 241 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEcc-CCCHHHHHHHHHH
Confidence 9999999999876543 33333344677889999999999999988766667788999998865 5678999999999
Q ss_pred cCceEEecchHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCC
Q 010344 228 SGVSVLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQP 305 (512)
Q Consensus 228 ~~~t~l~~~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~ 305 (512)
+++|++.++|+++..|++... ....+++++|.+++||+++++++.+.+.+.+ +..+++.||+||++.+.+.+.....
T Consensus 242 ~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~ 320 (509)
T PRK12406 242 HRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVTFATSEDAL 320 (509)
T ss_pred cCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceEecCccccc
Confidence 999999999999999887543 2345678999999999999999999998877 6889999999999986554433333
Q ss_pred CcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEe
Q 010344 306 QAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRT 384 (512)
Q Consensus 306 ~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~ 384 (512)
...+++|.|.++++++++|+++++++.|+ .||+++ ++.+.. ..++.+++.+... ..++||+|||+++++
T Consensus 321 ~~~~~~G~~~~~~~~~i~d~~~~~~~~g~--~Gel~v~~~~~~~-~~y~~~~~~~~~~-------~~~~~~~TGD~~~~~ 390 (509)
T PRK12406 321 SHPGTVGKAAPGAELRFVDEDGRPLPQGE--IGEIYSRIAGNPD-FTYHNKPEKRAEI-------DRGGFITSGDVGYLD 390 (509)
T ss_pred ccCCCcCccCCCcEEEEECCCCCCCCCCC--ceEEEEECCcccc-ccccCCchhcccc-------cCCCCeEEccEEEEc
Confidence 45678999999999999999999999998 699999 433321 1122222222221 245799999999999
Q ss_pred CCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHH
Q 010344 385 VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSK 464 (512)
Q Consensus 385 ~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~ 464 (512)
++|++++.||.+|++|++|.+|+|.+||+.|. .+|+|.++++++.++...+ +.+.+++++.+... .+.+++.+.
T Consensus 391 ~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~--- 464 (509)
T PRK12406 391 ADGYLFLCDRKRDMVISGGVNIYPAEIEAVLH-AVPGVHDCAVFGIPDAEFG-EALMAVVEPQPGAT-LDEADIRAQ--- 464 (509)
T ss_pred CCceEEEeecccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeeeccccC-ceeEEEEEECCCCC-CCHHHHHHH---
Confidence 99999999999999999999999999999998 8999999999999888777 78889998876543 455555444
Q ss_pred HHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 465 AIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 465 ~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+.+++++|++|..++++++||+|++||++|++|++.+..
T Consensus 465 -l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 465 -LKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred -HHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHh
Confidence 457788999999999999999999999999999987764
No 82
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=3.5e-59 Score=483.76 Aligned_cols=471 Identities=20% Similarity=0.243 Sum_probs=364.1
Q ss_pred HHHHHHHHh-cc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 3 YRLVANALD-TM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 3 ~~~~a~~L~-~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
++++|++|+ +. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++++++...
T Consensus 60 ~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~----- 134 (560)
T PRK08751 60 VEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFG----- 134 (560)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhH-----
Confidence 678999997 56 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCCCceEEeeccCCc-------------------ccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDD-------------------VGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDS 141 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (512)
..+.......+....+....... ......++...|.+....... ...+.....+++
T Consensus 135 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 209 (560)
T PRK08751 135 -TTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGRK----HSMPTLQIEPDD 209 (560)
T ss_pred -HHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCCCccccHHHHHhccCC----CCCCCCCCCccc
Confidence 12222222222111111100000 000001122334444432221 111223356788
Q ss_pred eEEEEecCCCCCCCceEEecCchhHHHHHHhhcccc----ccCC-cEEEecCCccchhhhHH-HHhhhccCceEEEecCC
Q 010344 142 VINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHID----MKVG-DVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGS 215 (512)
Q Consensus 142 ~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~ 215 (512)
+++++|||||||.||+|+++|.++..++......++ +.++ +++++..|++|.+++.. .+.++..|++.++....
T Consensus 210 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 289 (560)
T PRK08751 210 IAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNP 289 (560)
T ss_pred EEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCc
Confidence 999999999999999999999999887766554443 3333 56778899999998754 56677788888777656
Q ss_pred CchhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccc
Q 010344 216 PLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELAS 295 (512)
Q Consensus 216 ~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 295 (512)
..+..+++.++++++|++.++|.++..+++.......+++++|.+++||+++++.+.+.+++.+ ++++++.||+||++.
T Consensus 290 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~ 368 (560)
T PRK08751 290 RDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSP 368 (560)
T ss_pred CCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCC
Confidence 6788999999999999999999999999887655566788999999999999999999998876 688999999999987
Q ss_pred eecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCcee
Q 010344 296 SYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHL 374 (512)
Q Consensus 296 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (512)
....+........+++|.|.+++.++++|+++.+++.|+ .|||++ ++..+.+ ++.+++.+...+ +.++|
T Consensus 369 ~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~------~~~g~ 438 (560)
T PRK08751 369 AACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIGE--IGELCIKGPQVMKG--YWKRPEETAKVM------DADGW 438 (560)
T ss_pred ceecccccccccCCCcCccCCCceEEEECCCCCCCCCCC--ceEEEEecCccchh--hcCChhhhhhcc------ccCCC
Confidence 655444333345578999999999999999999999998 699999 5444332 222333444444 24579
Q ss_pred eeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCc
Q 010344 375 RRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQP 454 (512)
Q Consensus 375 ~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~ 454 (512)
|+|||+|+++++|++++.||.+|+|+++|++|+|.+||++|. .+|+|.+++|+++++...+ +.+.++++... .. .+
T Consensus 439 ~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~g-e~~~~~v~~~~-~~-~~ 514 (560)
T PRK08751 439 LHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA-MMPGVLEVAAVGVPDEKSG-EIVKVVIVKKD-PA-LT 514 (560)
T ss_pred ccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHH-hCcCeeeeEEEecCCCCCC-ceEEEEEEcCC-CC-CC
Confidence 999999999999999999999999999999999999999998 8999999999999988777 77877777543 22 45
Q ss_pred HHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHH
Q 010344 455 VDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQL 502 (512)
Q Consensus 455 ~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~ 502 (512)
.+++.++ +.+++++|+.|..|+++++||+|++||++|+.|++..
T Consensus 515 ~~~l~~~----~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~~ 558 (560)
T PRK08751 515 AEDVKAH----ARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDAA 558 (560)
T ss_pred HHHHHHH----HHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHhh
Confidence 5555544 4567888999999999999999999999999998763
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=7.9e-60 Score=528.25 Aligned_cols=477 Identities=18% Similarity=0.183 Sum_probs=372.4
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
.++++|++|.+.+++||+|+++++|+++++++++||+++|++++|++|..+.+++.+++++++++++++++.........
T Consensus 650 ~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 729 (1146)
T PRK08633 650 GALALARLLKRELKDEENVGILLPPSVAGALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNK 729 (1146)
T ss_pred HHHHHHHHHHHhCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhcc
Confidence 46789999975599999999999999999999999999999999999999999999999999999999987543111100
Q ss_pred cchhhHHhcCC--CceEEeeccCCcccccccccCccHHHHhhccCCCCCC--CCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 82 PLYSKVAEAGP--LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGP--KYYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 82 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
. .....+ ............ . .....+.+....... +.. .........++|+++++|||||||.||+
T Consensus 730 ~----~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKg 799 (1146)
T PRK08633 730 G----FDLELPENVKVIYLEDLKAK----I-SKVDKLTALLAARLL-PARLLKRLYGPTFKPDDTATIIFSSGSEGEPKG 799 (1146)
T ss_pred C----CchhcccCceEEEeehhccc----c-chhHHHHHHHHhccC-CHHHHHhhccCCCCCCCEEEEEECCCCCCCCce
Confidence 0 000011 111111110000 0 001112222111100 000 0000123457899999999999999999
Q ss_pred EEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 158 IPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
|++||+++..+.......++..++|++++.+|++|.+++.. ++.++..|+++++.+...+++.+++.++++++|++.++
T Consensus 800 v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~ 879 (1146)
T PRK08633 800 VMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGT 879 (1146)
T ss_pred EEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEec
Confidence 99999999988888777788899999999999999999876 78899999999997766788999999999999999999
Q ss_pred hHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC---------CCCc
Q 010344 237 PSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML---------QPQA 307 (512)
Q Consensus 237 P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~---------~~~~ 307 (512)
|++++.+.+.......+++++|.+++||+++++++.+.+++.+ +.++++.||+||+++..+..... ....
T Consensus 880 P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1146)
T PRK08633 880 PTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRILEGYGATETSPVASVNLPDVLAADFKRQTGSK 958 (1146)
T ss_pred HHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCeecccccccCcceEEEecCcccccccccccCCC
Confidence 9999999876555667789999999999999999999999888 78999999999998765433211 1124
Q ss_pred ccccccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeC
Q 010344 308 FGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTV 385 (512)
Q Consensus 308 ~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~ 385 (512)
.+++|+|+|+++++|+| +++++++.|+ .|||++ ++..+.+| +.+++.+...+.+ .++++||+|||+|++|+
T Consensus 959 ~~~vG~p~~~~~v~i~d~~~~~~~~~g~--~Gel~v~g~~~~~gY--~~~~~~t~~~~~~---~~~~~~~~TGD~~~~~~ 1031 (1146)
T PRK08633 959 EGSVGMPLPGVAVRIVDPETFEELPPGE--DGLILIGGPQVMKGY--LGDPEKTAEVIKD---IDGIGWYVTGDKGHLDE 1031 (1146)
T ss_pred CCCccccCCCCEEEEEcCCCCccCCCCC--ceEEEEcCCCccccc--cCCccchHHHhhc---CCCCCeEECCCEEEEcC
Confidence 57899999999999999 5689999999 699999 55544332 2344444444432 23568999999999999
Q ss_pred CCeEEEEeccCceeeecceecchHHHHHhhhcCCc--ceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHH
Q 010344 386 GGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADE--SILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFS 463 (512)
Q Consensus 386 ~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~--~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~ 463 (512)
||+++++||.||+||++|++|+|.|||++|. +|| .+.+++|++++++..+ +.++++++..+ .+.+++.++++
T Consensus 1032 ~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~~~~~~~~v~~~~~~~~g-~~~~~~v~~~~----~~~~~l~~~~~ 1105 (1146)
T PRK08633 1032 DGFLTITDRYSRFAKIGGEMVPLGAVEEELA-KALGGEEVVFAVTAVPDEKKG-EKLVVLHTCGA----EDVEELKRAIK 1105 (1146)
T ss_pred CceEEEEecccchhhhCcEEECHHHHHHHHH-hccCCCCceEEEEeccCCCCC-cEEEEEEecCc----cCHHHHHHHHH
Confidence 9999999999999999999999999999998 898 4678999999998888 88888888621 45555555554
Q ss_pred HHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 464 KAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 464 ~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
+ +++++|++|..+++++++|+|++||++|+.|+++.++.
T Consensus 1106 ~---~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1106 E---SGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred h---cCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 2 47999999999999999999999999999999987654
No 84
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-59 Score=477.89 Aligned_cols=466 Identities=17% Similarity=0.166 Sum_probs=368.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|.+. +++||+|+++++|+++++++++||+++|++++|++|..+.+++..+++.++++.+++++.. .
T Consensus 46 ~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~ 120 (524)
T PRK06188 46 RISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAP-----F 120 (524)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecch-----h
Confidence 368899999999 9999999999999999999999999999999999999999999999999999999998741 1
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
................++...... .+.++....... ...... ....++++++++|||||||.||+|++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~~~~~~-~~~~~~~~a~i~~TSGtTG~pk~v~~ 188 (524)
T PRK06188 121 VERALALLARVPSLKHVLTLGPVP----------DGVDLLAAAAKF-GPAPLV-AAALPPDIAGLAYTGGTTGKPKGVMG 188 (524)
T ss_pred hHHHHHHhhhcCCceEEEEeCCcc----------chhhHHHhhhcc-Cccccc-ccCCCCCeEEEEeCCCCCCCCceeee
Confidence 111111111111111122111100 011111111110 001111 12234569999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
+|.++...+......+++..++++++..|++|..++. ++.+++.|+++++.+ ..++..+++.++++++|+++++|+++
T Consensus 189 s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~l 266 (524)
T PRK06188 189 THRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLVPTMI 266 (524)
T ss_pred ehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEehHHHH
Confidence 9999999888888888899999999999999998874 578899999999976 56789999999999999999999999
Q ss_pred HHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC-----CCCccccccccc
Q 010344 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML-----QPQAFGAFSTAT 315 (512)
Q Consensus 241 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-----~~~~~~~~G~p~ 315 (512)
..+++.......+++++|.+++||++++++....+.+.+ +..+++.||+||++..+...... ......++|.|+
T Consensus 267 ~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~ 345 (524)
T PRK06188 267 YALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPT 345 (524)
T ss_pred HHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCceeecCchhccccccccCCcccccc
Confidence 999988766667889999999999999999888887777 57799999999997654433221 123457899999
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEec
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGR 394 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR 394 (512)
++++++|+|+++++++.|+ .|||++ ++....+| +.+++.+...+ .++||+|||+|+++++|++++.||
T Consensus 346 ~g~~v~i~~~~~~~~~~g~--~Gel~v~~~~~~~gy--~~~~~~~~~~~-------~~g~~~TGDl~~~~~~g~~~~~GR 414 (524)
T PRK06188 346 PGLRVALLDEDGREVAQGE--VGEICVRGPLVMDGY--WNRPEETAEAF-------RDGWLHTGDVAREDEDGFYYIVDR 414 (524)
T ss_pred CCcEEEEEcCCCCCCCCCC--eeEEEEECcchhhhh--cCChHHhhhhh-------cCCceeecceEEEcCCccEEEEec
Confidence 9999999999999999999 699999 44333221 11222222112 247999999999999999999999
Q ss_pred cCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcc
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLF 474 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 474 (512)
.+|+++++|++|+|.+||++|. .+++|.+++|++.+++..+ +.+.+++++++... .+.+++. +++.+.+++|+
T Consensus 415 ~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~----~~~~~~l~~~~ 487 (524)
T PRK06188 415 KKDMIVTGGFNVFPREVEDVLA-EHPAVAQVAVIGVPDEKWG-EAVTAVVVLRPGAA-VDAAELQ----AHVKERKGSVH 487 (524)
T ss_pred cccceecCCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCcC-ceEEEEEEECCCCC-CCHHHHH----HHHHHhcccCC
Confidence 9999999999999999999998 8999999999999888777 89999999876544 4544554 44556788899
Q ss_pred ceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 475 KVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 475 ~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
.|..|+++++||+|++||++|++|++++.+.
T Consensus 488 ~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~ 518 (524)
T PRK06188 488 APKQVDFVDSLPLTALGKPDKKALRARYWEG 518 (524)
T ss_pred CCcEEEEecCCCCCccccccHHHHHHHHHhh
Confidence 9999999999999999999999999998654
No 85
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=6.2e-60 Score=468.90 Aligned_cols=468 Identities=20% Similarity=0.171 Sum_probs=347.3
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
+.++|++|+.. +++||+|+|++.|+++|+++.+||+.+|++.||+.++++++++.++|+++++++||++... ..
T Consensus 55 v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~-----~~ 129 (613)
T COG1022 55 VRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQE-----LL 129 (613)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchH-----HH
Confidence 57899999999 9779999999999999999999999999999999999999999999999999999999852 22
Q ss_pred cchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCC----CCCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDY----HPGPKYYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
+.+..+...++.......... ............++.+...... ..........+..++|+|.|+|||||||.|||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKG 208 (613)
T COG1022 130 DLVLPVLEDCPKVVDLIVIID-LVREAVEAKALVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKG 208 (613)
T ss_pred HHHHhhhccccchhhhhhhhh-hhhhccchhhccccccccccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCce
Confidence 333333333222000000000 0000000000011110000000 00011112245678999999999999999999
Q ss_pred EEecCchhHHHHHHhhcccc-ccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 158 IPWTQLSPIRCAAEAWGHID-MKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
||+||.|+.+++........ ..++|++++++|+.|.+.+.. ....+..|+++.+ ..+++.+++.+++++||++++
T Consensus 209 VmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~---~~~~~~~~~dl~~~rPt~m~~ 285 (613)
T COG1022 209 VMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF---KEDPRTLLEDLKEVRPTVMIG 285 (613)
T ss_pred EEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe---cCCHHHHHHHHHHhCCeEEee
Confidence 99999999999999998886 899999999999999999976 5455555555555 445689999999999999999
Q ss_pred chHHHHHHHccC-------C-----------------------C------------------CCCCcCceeEEEeecCCC
Q 010344 236 VPSLVKAWKNTN-------C-----------------------L------------------QGLDWTKIRSFASTGETS 267 (512)
Q Consensus 236 ~P~~~~~l~~~~-------~-----------------------~------------------~~~~l~~l~~i~~~G~~l 267 (512)
+|..|+.+.+.. . . ...-...+|++++||+++
T Consensus 286 VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l 365 (613)
T COG1022 286 VPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPL 365 (613)
T ss_pred chHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcC
Confidence 999998874330 0 0 001114899999999999
Q ss_pred CchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-cccc
Q 010344 268 NVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLY 346 (512)
Q Consensus 268 ~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~ 346 (512)
++++..+++.. ++++.++||+||+++..+.++. .....+++|.|+|+++++|.|+ |||++ ++.+
T Consensus 366 ~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~~-~~~~~gtvG~p~p~~evKI~d~------------GEilVRG~~V 430 (613)
T COG1022 366 SPELLHFFRSL--GIPILEGYGLTETSAVVSVNPP-DRFVLGTVGKPLPGIEVKIADD------------GEILVRGPNV 430 (613)
T ss_pred CHHHHHHHHHc--CCCeEEEecccccccceEEccc-cCcccCCcCCcCCCceEEEccC------------ceEEEecchh
Confidence 99999999876 6999999999999987766544 4556789999999999999983 99999 6777
Q ss_pred ccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceee-ecceecchHHHHHhhhcCCcceeee
Q 010344 347 LGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDGADESILET 425 (512)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~-~~G~~v~~~~iE~~l~~~~~~v~~~ 425 (512)
+.+ ||.+++.|.+.| +.+|||+|||+|.+|++|+|+|+||++|+|+ .+|++|.|+.||+.+. .+|.|.++
T Consensus 431 m~G--Yyk~pe~Taeaf------~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~-~~~~I~qi 501 (613)
T COG1022 431 MKG--YYKNPEATAEAF------TEDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLA-KSPLIEQI 501 (613)
T ss_pred cch--hcCChHHHhhhc------cccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHh-cCCCeeEE
Confidence 765 344666666666 5689999999999999999999999999999 5999999999999998 99999999
Q ss_pred eEEeeCCCCCCCceEEEEEEecCCCCC-----------CcH------HHHHHHHHHHHH---hccCCccceeeEEEec-C
Q 010344 426 AAISVSPAGGGPEVLVICVVLKKGFTS-----------QPV------DKLKMIFSKAIQ---RNLNPLFKVSLVKIVL-E 484 (512)
Q Consensus 426 ~v~~~~~~~~~~~~~~a~v~~~~~~~~-----------~~~------~~l~~~~~~~~~---~~l~~~~~p~~i~~~~-~ 484 (512)
+|++... ..+.|.|++..+.-. .+. ..+.+.+...+. ..+..+..+..+.+.. +
T Consensus 502 ~vvg~~k-----~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~ 576 (613)
T COG1022 502 CVVGDDK-----KFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKE 576 (613)
T ss_pred EEEecCC-----cceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccc
Confidence 9998332 678899998643110 111 223333333332 2334455565565553 2
Q ss_pred C-----CCCCCchHHHHHHHHHHHhhhhc
Q 010344 485 F-----PRTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 485 i-----P~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
+ -.|++-|++|..+.+.++.+++.
T Consensus 577 ~t~~~~~~t~t~klkR~~i~~~~~~~i~~ 605 (613)
T COG1022 577 FTPENGELTPTLKLKRHVILDRYKDEIEA 605 (613)
T ss_pred cccccCccccchhhhHHHHHHhhhhHHHH
Confidence 2 36889999999999999987764
No 86
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=5.7e-59 Score=476.76 Aligned_cols=459 Identities=18% Similarity=0.193 Sum_probs=371.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|.+|.+. +++||+|+++++|+.++++++|||+++|++++|+++.++.+++..+++..+++++++++...
T Consensus 36 ~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 110 (503)
T PRK04813 36 DSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELP----- 110 (503)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEeccccc-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987420
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
. . ...... ..++++...... ...........++++++++|||||||.||+|.+
T Consensus 111 --~-----~--~~~~~~----------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~ 163 (503)
T PRK04813 111 --L-----E--ILGIPV----------------ITLDELKDIFAT--GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQI 163 (503)
T ss_pred --c-----c--ccCCcE----------------EehHHhhhhhhc--cccccccccCCCCCcEEEEECCCCCCCCcEEEe
Confidence 0 0 000000 112222111100 001111223456789999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC--CchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS--PLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|+++.....+....+++..+++++...|++|..+...++.++..|+++++.+.. .++..+++.++++++|++..+|+
T Consensus 164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~ 243 (503)
T PRK04813 164 SHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPS 243 (503)
T ss_pred ehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChH
Confidence 9999998888777778888999999999999999888888999999999998753 35788999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC----CCCcccccccc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML----QPQAFGAFSTA 314 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~----~~~~~~~~G~p 314 (512)
++..+.........+++++|.++++|+++++.+.+.+.+.+++.++++.||+||++..+...... ......++|.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~ 323 (503)
T PRK04813 244 FADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYA 323 (503)
T ss_pred HHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCccccc
Confidence 99887655444556778999999999999999999999998888999999999997654432221 12345579999
Q ss_pred cCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEe
Q 010344 315 TMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQG 393 (512)
Q Consensus 315 ~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~g 393 (512)
.++++++|+|++|.+++.|+ .|||++ ++....+| +.+++.+...|.. .++.+||+|||+|++ ++|++++.|
T Consensus 324 ~~~~~~~i~d~~~~~~~~g~--~Gel~v~~~~~~~gy--~~~~~~~~~~~~~---~~g~~~~~tGD~~~~-~~g~~~~~G 395 (503)
T PRK04813 324 KPDSPLLIIDEEGTKLPDGE--QGEIVISGPSVSKGY--LNNPEKTAEAFFT---FDGQPAYHTGDAGYL-EDGLLFYQG 395 (503)
T ss_pred CCCCEEEEECCCCCCCCCCC--ceEEEEecccccccc--CCChhHhHHhhcc---CCCceeEECCceEEe-eCCeEEEec
Confidence 99999999999999999998 699999 44433322 2233333222211 145579999999999 999999999
Q ss_pred ccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCc
Q 010344 394 RADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPL 473 (512)
Q Consensus 394 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 473 (512)
|.+|+|+++|++|+|.+||+.+. .+|+|.+++|++.++...+ +.++++++..++.. ....++.+.+++++.++++++
T Consensus 396 R~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~~~~~l~~~~~~~l~~~ 472 (503)
T PRK04813 396 RIDFQIKLNGYRIELEEIEQNLR-QSSYVESAVVVPYNKDHKV-QYLIAYVVPKEEDF-EREFELTKAIKKELKERLMEY 472 (503)
T ss_pred cccceEEECcEEeCHHHHHHHHH-hCCCcceEEEEEeeCCCCc-cEEEEEEEeccccc-cccchhHHHHHHHHHhhCccc
Confidence 99999999999999999999998 8999999999997766556 78889988876432 334467778888888999999
Q ss_pred cceeeEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 474 FKVSLVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 474 ~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
++|..|++++++|+|++||++|++|++++.
T Consensus 473 ~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 473 MIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred cCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 999999999999999999999999999875
No 87
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=5.4e-59 Score=476.81 Aligned_cols=466 Identities=22% Similarity=0.247 Sum_probs=369.9
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|+++|+++++||+++|++++|+++.++.+++.++++.+++++++++....
T Consensus 39 ~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~----- 113 (508)
T TIGR02262 39 QVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL----- 113 (508)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH-----
Confidence 368999999988 99999999999999999999999999999999999999999999999999999999987422
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
+.+..+....+....++..... ......+.++...... ...+....++++++++|||||||.||+|++
T Consensus 114 -~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~ 181 (508)
T TIGR02262 114 -PVIKAALGKSPHLEHRVVVGRP------EAGEVQLAELLATESE-----QFKPAATQADDPAFWLYSSGSTGMPKGVVH 181 (508)
T ss_pred -HHHHHHHhcCCCccEEEEeCCC------CcccccHHHHhhcCCC-----ccCCCCCCCCCcEEEEeCCCCCCCCcEEEE
Confidence 2222222222221111111110 0112234444332221 112223456889999999999999999999
Q ss_pred cCchhHHHHHH-hhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAE-AWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|+++...+.. ....+++.++|+++..+|++|.+++.. ++.++..|+++++.+....+..+++.|+++++|++.++|.
T Consensus 182 s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~ 261 (508)
T TIGR02262 182 THSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPT 261 (508)
T ss_pred echhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchH
Confidence 99999877655 334568899999999999999998855 7778999999999876677899999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
++..++...........++|.++++|+++++++.+.|.+.+ ++++++.||+||++.+...+.. .....+++|.|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~G~~~~g~ 339 (508)
T TIGR02262 262 LYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHIFLSNLP-GDVRYGTSGKPVPGY 339 (508)
T ss_pred HHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCceeecCCc-cCCCCCCcCCCCCCc
Confidence 99888765443344567899999999999999999999888 6899999999999876554322 233457899999999
Q ss_pred cEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCc
Q 010344 319 GFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADD 397 (512)
Q Consensus 319 ~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d 397 (512)
.++|+|+++.+++.|+ .|||++ ++....+ ++.+++.+...| .++||+|||+++++++|.++++||.+|
T Consensus 340 ~v~i~d~~~~~~~~g~--~Gel~i~~~~~~~g--Y~~~~~~~~~~~-------~~~~~~TGD~~~~~~~g~~~~~gR~~d 408 (508)
T TIGR02262 340 RLRLVGDGGQDVAAGE--PGELLISGPSSATM--YWNNRAKTRDTF-------QGEWTRSGDKYVRNDDGSYTYAGRTDD 408 (508)
T ss_pred EEEEECCCCCCCCCCC--eeEEEEecCccccc--cCCCHHHhHhhh-------hcCceeccceEEEcCCccEEEeccccc
Confidence 9999999999999999 699999 4333322 222233222222 246999999999999999999999999
Q ss_pred eeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCcccee
Q 010344 398 TMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVS 477 (512)
Q Consensus 398 ~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~ 477 (512)
+++.+|.+|+|.+||+.|. .+++|.++++++.++...+ +.+.+++++.++.. . .+.+.+.+++.++++|++|+.|.
T Consensus 409 ~i~~~G~~v~~~~ie~~l~-~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~-~~~~~~~i~~~~~~~l~~~~~p~ 484 (508)
T TIGR02262 409 MLKVSGIYVSPFEIESALI-QHPAVLEAAVVGVEDEDGL-IKPKAFIVLRPGQD-I-DTALETELKEHVKDRLAPYKYPR 484 (508)
T ss_pred eeeeCCEEECHHHHHHHHH-hCCCeeEEEEEeccccCCC-ceeEEEEEeCCCCc-c-ccccHHHHHHHHHHhcccCCCCc
Confidence 9999999999999999998 8999999999998877666 78889998876543 1 23445667777778899999999
Q ss_pred eEEEecCCCCCCCchHHHHHHHHH
Q 010344 478 LVKIVLEFPRTASNKLLRRVLKDQ 501 (512)
Q Consensus 478 ~i~~~~~iP~t~~GKi~r~~l~~~ 501 (512)
.+.++++||+|++||++|+.|+++
T Consensus 485 ~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 485 WIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred eEEEecCCCCCCCCcEehhhccCC
Confidence 999999999999999999998753
No 88
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=9.4e-60 Score=575.67 Aligned_cols=456 Identities=21% Similarity=0.208 Sum_probs=376.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++++++++++++.....
T Consensus 545 ~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~---- 620 (5163)
T PRK12316 545 RANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGR---- 620 (5163)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhh----
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999874321
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.+ ........+.++.. ..+ .... ....+.....++++++++|||||||.||||++
T Consensus 621 --~~---~~~~~~~~~~~~~~------------~~~---~~~~-----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~ 675 (5163)
T PRK12316 621 --KL---PLAAGVQVLDLDRP------------AAW---LEGY-----SEENPGTELNPENLAYVIYTSGSTGKPKGAGN 675 (5163)
T ss_pred --hC---CcccCceEEEecCc------------chh---hccC-----CCCCCCCCCCCCCeEEEEECCCcCCCCCEeeE
Confidence 00 00001111111100 000 0000 01112223457889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC--CCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG--SPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|+++.+.+.+....+++.+++++++..|++|..+++.++.+|+.|+++++.+. ..++..+++.++++++|++.++|+
T Consensus 676 ~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps 755 (5163)
T PRK12316 676 RHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPS 755 (5163)
T ss_pred cCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHH
Confidence 999999999988888999999999999999999999889999999999999864 356889999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC-CCCCcccccccccCC
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM-LQPQAFGAFSTATMT 317 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~~~~~~~~~G~p~~~ 317 (512)
+++.|++... ..+++++|.+++|||++++++.+.+.+.+++.++++.||+||++..++.... .......++|+|++|
T Consensus 756 ~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~ 833 (5163)
T PRK12316 756 MLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIAN 833 (5163)
T ss_pred HHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCC
Confidence 9999986532 3457899999999999999999999888878899999999999854332221 222345689999999
Q ss_pred ccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccC
Q 010344 318 TGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD 396 (512)
Q Consensus 318 ~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~ 396 (512)
++++|+|++++++|.|+ .|||+| +++...+| +.+++.+...|..+++.++++||+|||+|++++||+++++||.|
T Consensus 834 ~~~~i~d~~~~~~p~G~--~GEl~i~G~~v~~GY--l~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d 909 (5163)
T PRK12316 834 LACYILDANLEPVPVGV--LGELYLAGRGLARGY--HGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRID 909 (5163)
T ss_pred CEEEEECCCCCCCCCCC--ceEEEecccccChhh--CCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccC
Confidence 99999999999999999 699999 66655432 33566666677777766788999999999999999999999999
Q ss_pred ceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce
Q 010344 397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV 476 (512)
Q Consensus 397 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p 476 (512)
|+||++|++|+|.|||++|. +||+|.+++|++.+ + +.++|+|++.++.. ...++ +++++.++|++|++|
T Consensus 910 ~~ik~~G~rI~~~EIE~~l~-~~p~V~~a~V~~~~----~-~~lva~vv~~~~~~-~~~~~----l~~~l~~~Lp~y~vP 978 (5163)
T PRK12316 910 HQVKLRGLRIELGEIEARLL-EHPWVREAAVLAVD----G-KQLVGYVVLESEGG-DWREA----LKAHLAASLPEYMVP 978 (5163)
T ss_pred CEEEEceEEcChHHHHHHHH-hCCCcceEEEEEcC----C-CeEEEEEEccCCCC-CCHHH----HHHHHHhhCCCccCC
Confidence 99999999999999999998 89999999999886 4 79999999876543 44444 455556789999999
Q ss_pred eeEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 477 SLVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 477 ~~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
..|+++++||+|++||++|++|++...
T Consensus 979 ~~i~~v~~lP~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 979 AQWLALERLPLTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred CeEEEHhhCCCCCCCChhHHhhcCccc
Confidence 999999999999999999999987543
No 89
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-58 Score=475.41 Aligned_cols=475 Identities=19% Similarity=0.153 Sum_probs=363.4
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++++++++++++....
T Consensus 37 ~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~----- 111 (533)
T PRK07798 37 RANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFA----- 111 (533)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987421
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
..+..+....+....++..... .......+..++++++..... ..... ...++.++++|||||||.||+|++
T Consensus 112 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~i~~TSGTTG~PK~v~~ 183 (533)
T PRK07798 112 -PRVAEVLPRLPKLRTLVVVEDG-SGNDLLPGAVDYEDALAAGSP-----ERDFG-ERSPDDLYLLYTGGTTGMPKGVMW 183 (533)
T ss_pred -HHHHHHhccCCCccEEEEecCC-cccccCCccccHHHHHhccCC-----cCCCC-CCCCCceEEEECCCCCCCCcEEEE
Confidence 2222332222222122221111 111111234567777654332 11111 122345799999999999999999
Q ss_pred cCchhHHHHHHhhcc---------ccc------cCCcEEEecCCccchhhhHHHHhhhccCceEEEecC-CCchhhHHHH
Q 010344 161 TQLSPIRCAAEAWGH---------IDM------KVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG-SPLERSFGKF 224 (512)
Q Consensus 161 s~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~ 224 (512)
+|.++..+....... ..+ ..+++++..+|++|..+++.++.+++.|+++++.+. ..++..+++.
T Consensus 184 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~ 263 (533)
T PRK07798 184 RQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRT 263 (533)
T ss_pred ecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHH
Confidence 999987654432211 111 567889999999999999889999999999999863 4568899999
Q ss_pred HHhcCceEEecchHHHHH-HHccCC-CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC
Q 010344 225 VQDSGVSVLGTVPSLVKA-WKNTNC-LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM 302 (512)
Q Consensus 225 l~~~~~t~l~~~P~~~~~-l~~~~~-~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 302 (512)
++++++|++.++|..+.. +..... ....+++++|.+++||+++++++.+++.+.+++.++++.||+||++........
T Consensus 264 i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~ 343 (533)
T PRK07798 264 IEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVA 343 (533)
T ss_pred HHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCC
Confidence 999999999999876543 333222 234567899999999999999999999988878899999999999765443322
Q ss_pred CCCCcccccc--cccCCccEEEeCCCCCCCCCCCCcccccccccccccccccccccCcceeEEecCCcccCceeeeecce
Q 010344 303 LQPQAFGAFS--TATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDI 380 (512)
Q Consensus 303 ~~~~~~~~~G--~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~ 380 (512)
... ...| .+.++..++|+|+++++++.|+.+.|+++.++....+ ++.++..+...|.. .++.+||+|||+
T Consensus 344 ~~~---~~~g~~~~~~~~~~~i~~~~~~~~~~g~~~~g~l~~~~~~~~g--y~~~~~~t~~~f~~---~~~~~~~~TGD~ 415 (533)
T PRK07798 344 KGA---VHTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWIARRGHIPLG--YYKDPEKTAETFPT---IDGVRYAIPGDR 415 (533)
T ss_pred CCC---ccCCCCccCCCceEEEECCCCCCCCCCCCCeeEEEeecCcccc--ccCChhhhHHhhcc---CCCCceEEcCcE
Confidence 111 2233 6788999999999999999998433777766543332 22333333333321 245679999999
Q ss_pred EEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHH
Q 010344 381 IKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKM 460 (512)
Q Consensus 381 ~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~ 460 (512)
+++|++|++++.||.+|+++.+|++|+|.+||+++. ++|.|.++++++.++...+ +.+.++++++++.. .+.+++.+
T Consensus 416 ~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~ 492 (533)
T PRK07798 416 ARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALK-AHPDVADALVVGVPDERWG-QEVVAVVQLREGAR-PDLAELRA 492 (533)
T ss_pred EEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHH-hCccceeEEEEeccCcccC-ceEEEEEEECCCCC-CCHHHHHH
Confidence 999999999999999999999999999999999998 8999999999999887777 78999998876654 55555555
Q ss_pred HHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 461 IFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 461 ~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
++ +++|++|++|..++++++||+|++||++|+.|++++++
T Consensus 493 ~l----~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 493 HC----RSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred HH----hhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhcc
Confidence 55 46778899999999999999999999999999999875
No 90
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-58 Score=479.22 Aligned_cols=476 Identities=20% Similarity=0.197 Sum_probs=362.4
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++++++...
T Consensus 67 ~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~----- 141 (567)
T PRK06178 67 LSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA----- 141 (567)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH-----
Confidence 368899999999 99999999999999999999999999999999999999999999999999999999987532
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccc----ccc-------ccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGI----QLR-------QQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSS 149 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 149 (512)
+.+..+........+++......... ... .....+.++.+.... ...........++++++++|||
T Consensus 142 -~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TS 218 (567)
T PRK06178 142 -PVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRA--CTAPVPLPPPALDALAALNYTG 218 (567)
T ss_pred -HHHHHhhccCCcceEEEeccccccccccccccccccccccccccccccHHHHhhc--cccccccCCCCCCCeEEEEeCC
Confidence 22333322222222222111100000 000 001123333332211 0111112234578899999999
Q ss_pred CCCCCCceEEecCchhHHHHHHhhc-cccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCCCchhhHHHHHHh
Q 010344 150 GTTGEPKAIPWTQLSPIRCAAEAWG-HIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQD 227 (512)
Q Consensus 150 GtTG~pK~v~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~ 227 (512)
||||.||+|++||.++..+...... ......++++++.+|++|.+++. .++.+++.|+++++.+ ..++..++..+++
T Consensus 219 GTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~-~~~~~~~~~~i~~ 297 (567)
T PRK06178 219 GTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA-RWDAVAFMAAVER 297 (567)
T ss_pred CCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC-CCCHHHHHHHHHH
Confidence 9999999999999998876554432 35678899999999999999985 4788899999999976 5678999999999
Q ss_pred cCceEEecchHHHHHHHccCCCCCCCcCceeEEEe--ecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC--
Q 010344 228 SGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFAS--TGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML-- 303 (512)
Q Consensus 228 ~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~--~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-- 303 (512)
+++|.+.++|..+..++........++++++.+.. .++.+++++.+.+++.++...+.+.||+||++.........
T Consensus 298 ~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~ 377 (567)
T PRK06178 298 YRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQD 377 (567)
T ss_pred hCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceecccccc
Confidence 99999999999999988765555566778888654 45889999999998887433344579999987653322111
Q ss_pred C----CCcccccccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeee
Q 010344 304 Q----PQAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRH 377 (512)
Q Consensus 304 ~----~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T 377 (512)
. ....+++|.|++|++++|+| +++.+++.|+ .|||++ ++.++.+| +.+++.+...|. +|||+|
T Consensus 378 ~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~--~Gel~v~g~~v~~gY--~~~~~~~~~~~~-------dg~~~T 446 (567)
T PRK06178 378 DDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGA--EGEIVVRTPSLLKGY--WNKPEATAEALR-------DGWLHT 446 (567)
T ss_pred CccccccCCcccccccCCcEEEEEcCCCCCcCCCCC--ceEEEEECCcccccc--cCChhhhhhccc-------CCceee
Confidence 1 12346799999999999999 6789999998 699999 55444322 223333333231 469999
Q ss_pred cceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHH
Q 010344 378 GDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDK 457 (512)
Q Consensus 378 GD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~ 457 (512)
||+|+++++|+++++||.+|+|+.+|++|+|.+||+++. .+++|.++++++.+++..+ +.++++|++.++.. .+.++
T Consensus 447 GDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~-~~~~~ 523 (567)
T PRK06178 447 GDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLG-QHPAVLGSAVVGRPDPDKG-QVPVAFVQLKPGAD-LTAAA 523 (567)
T ss_pred cceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHH-hCCCeeEEEEEcCcCcccC-cceEEEEEeCCCCc-CCHHH
Confidence 999999999999999999999999999999999999998 8999999999999888777 88999999876554 55555
Q ss_pred HHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344 458 LKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE 505 (512)
Q Consensus 458 l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 505 (512)
+.+ .+++++++|++|. +.++++||+|++||++|++|++++++.
T Consensus 524 l~~----~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 524 LQA----WCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred HHH----HHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 554 4456788999996 888999999999999999999998753
No 91
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.3e-59 Score=488.40 Aligned_cols=470 Identities=14% Similarity=0.086 Sum_probs=348.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcC-----HHHHHHHHHhcCccEEEeccchh
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFA-----AREIATRLRVSKAKGIFTQDFIL 75 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~iv~~~~~~ 75 (512)
.++++|++|.+. +++||+|+++++|+++|++++|||+++|++++|++|.++ .+++.+++++++++++|+++...
T Consensus 78 ~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~ 157 (614)
T PRK08180 78 RVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA 157 (614)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH
Confidence 478999999999 999999999999999999999999999999999999998 79999999999999999985310
Q ss_pred ccCccccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010344 76 RGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~p 155 (512)
....+.... ......++.. ... .......|.++...... ...........++++++|+|||||||.|
T Consensus 158 ----~~~~~~~~~-~~~~~~i~~~--~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ilyTSGTTG~P 224 (614)
T PRK08180 158 ----FARALAAVV-PADVEVVAVR--GAV----PGRAATPFAALLATPPT--AAVDAAHAAVGPDTIAKFLFTSGSTGLP 224 (614)
T ss_pred ----HHHHHhhhc-cCCceEEEec--CCC----CCcccccHHHHhccccc--cchhhhccCCCcCceEEEEECCCCCCCC
Confidence 000011100 0111111111 100 00112456666543221 0001111233568899999999999999
Q ss_pred ceEEecCchhHHHHHHhhcccccc--CCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCch---hhHHHHHHhcC
Q 010344 156 KAIPWTQLSPIRCAAEAWGHIDMK--VGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLE---RSFGKFVQDSG 229 (512)
Q Consensus 156 K~v~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~---~~~~~~l~~~~ 229 (512)
|||++||+++..+.......++.. .++++++.+|++|.+++.. ++.+++.|+++++.+...++ ..+++.+++++
T Consensus 225 KgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~ 304 (614)
T PRK08180 225 KAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREIS 304 (614)
T ss_pred CEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhC
Confidence 999999999998877766655553 5689999999999998754 77899999999997643333 46788899999
Q ss_pred ceEEecchHHHHHHHccCC----CCCCCcCceeEEEeecCCCCchhhHHHHHhh----C-CCCeeeecCCccccceeccc
Q 010344 230 VSVLGTVPSLVKAWKNTNC----LQGLDWTKIRSFASTGETSNVDDDLWLASKA----Y-YKPIIECCGGTELASSYIQG 300 (512)
Q Consensus 230 ~t~l~~~P~~~~~l~~~~~----~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~----~-~~~i~~~yG~tE~~~~~~~~ 300 (512)
+|+++++|.++..|++... ....+++++|.+++||+++++++.+.+.+.+ + ++++++.||+||++.+.+..
T Consensus 305 ~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~ 384 (614)
T PRK08180 305 PTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFT 384 (614)
T ss_pred CcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEec
Confidence 9999999999998876432 1234578999999999999999999888642 1 36799999999998755443
Q ss_pred CCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecc
Q 010344 301 SMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGD 379 (512)
Q Consensus 301 ~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD 379 (512)
.. .....+++|+|+++++++|+|+. . .|||++ ++..+.+ |+.+++.+...| +.+|||+|||
T Consensus 385 ~~-~~~~~~svG~p~pg~~v~i~d~~-------~--~GEi~vrg~~v~~G--Y~~~p~~t~~~~------~~dgw~~TGD 446 (614)
T PRK08180 385 TG-PLSRAGNIGLPAPGCEVKLVPVG-------G--KLEVRVKGPNVTPG--YWRAPELTAEAF------DEEGYYRSGD 446 (614)
T ss_pred cc-ccCCCCcccCccCCcEEEEecCC-------C--CcEEEEecCccchh--hcCChhHhHhhc------ccCCceeccc
Confidence 32 23456899999999999999752 2 499999 5554432 222334333333 3468999999
Q ss_pred eEEE----eCCCeEEEEeccCceee-ecceecc--hHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCC-
Q 010344 380 IIKR----TVGGYIIVQGRADDTMN-LGGIKTS--SVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFT- 451 (512)
Q Consensus 380 ~~~~----~~~g~l~i~gR~~d~i~-~~G~~v~--~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~- 451 (512)
+|++ |++|+++|+||++|+|+ .+|++|+ |.|+|.++. .||.|.+++|++.++ +.+.|+|+++++..
T Consensus 447 lg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~-~~p~V~~a~V~g~~~-----~~~~a~V~~~~~~~~ 520 (614)
T PRK08180 447 AVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSA-GAPLVQDVVITGHDR-----DEIGLLVFPNLDACR 520 (614)
T ss_pred eEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhh-cCchhheEEEEcCCC-----CceEEEEEcCHHHHH
Confidence 9999 46899999999999888 5898766 778889987 899999999999887 56778998875410
Q ss_pred -------------CCcHHHHHHHHHHHHHhc----cCCccceeeEEEecCCCCC------CCchHHHHHHHHHHHhhhhc
Q 010344 452 -------------SQPVDKLKMIFSKAIQRN----LNPLFKVSLVKIVLEFPRT------ASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 452 -------------~~~~~~l~~~~~~~~~~~----l~~~~~p~~i~~~~~iP~t------~~GKi~r~~l~~~~~~~~~~ 508 (512)
..+.+++.+++++.+.+. ...+.+|+.|++++++|++ ++||+.|+++.+.|++++++
T Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~ 600 (614)
T PRK08180 521 RLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEA 600 (614)
T ss_pred HHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHH
Confidence 024456777776665431 1122389999999999875 46799999999999998875
No 92
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-58 Score=476.52 Aligned_cols=480 Identities=19% Similarity=0.185 Sum_probs=362.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.... ...
T Consensus 44 ~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~-~~~ 122 (540)
T PRK06164 44 LVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKG-IDF 122 (540)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEcccccc-ccH
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999875310 000
Q ss_pred ccchhhHHhc-CC-C-ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 81 FPLYSKVAEA-GP-L-KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 81 ~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
...+..+... .. . ...++........ ......+..+....... ............+++++++|||||||.||+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 198 (540)
T PRK06164 123 AAILAAVPPDALPPLRAIAVVDDAADATP---APAPGARVQLFALPDPA-PPAAAGERAADPDAGALLFTTSGTTSGPKL 198 (540)
T ss_pred HHHhhcccccccCCcceEEEeccCcccCC---CCCcccccccccccccC-CcccccccCCCCCceEEEEECCCCCCCCcE
Confidence 0011111100 00 1 1122210000000 00001111111111100 000001122346789999999999999999
Q ss_pred EEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 158 IPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
|+++|.++...+......+++.+++++++.+|++|.+++..++.++..|+++++.+ ..++..+++.|+++++|+++++|
T Consensus 199 v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p 277 (540)
T PRK06164 199 VLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEP-VFDAARTARALRRHRVTHTFGND 277 (540)
T ss_pred EEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCH
Confidence 99999999988888777888899999999999999999988999999999998865 56788999999999999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeec-CCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCC--Ccccccccc
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTG-ETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQP--QAFGAFSTA 314 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G-~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~--~~~~~~G~p 314 (512)
+++..|.+.. ....++++++.+..+| ......+.+++... ++++++.||+||++..+........ ......|.|
T Consensus 278 ~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~ 354 (540)
T PRK06164 278 EMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR--GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRP 354 (540)
T ss_pred HHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--CCceecceeeccccceeeccCCCCCCcceeccCccc
Confidence 9999998762 3456788999887766 44445556666544 6889999999999876554433221 223456777
Q ss_pred c-CCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEE
Q 010344 315 T-MTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIV 391 (512)
Q Consensus 315 ~-~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i 391 (512)
. +++.++|+| +++.+++.|+ .|||++ ++..+.+| +.+++.+...| ..++||+|||+|+++++|++++
T Consensus 355 ~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~g~~~~~gY--~~~~~~t~~~~------~~~~~~~TGDl~~~~~~g~l~~ 424 (540)
T PRK06164 355 ASPEARVRARDPQDGALLPDGE--SGEIEIRAPSLMRGY--LDNPDATARAL------TDDGYFRTGDLGYTRGDGQFVY 424 (540)
T ss_pred cCCCeEEEEecCCCCcCCCCCC--eeEEEEecccccccc--cCCchhhhhcc------cCCCceecCCeEEEcCCceEEE
Confidence 5 789999999 6788999999 799999 55555432 23344333333 3457999999999999999999
Q ss_pred EeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccC
Q 010344 392 QGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLN 471 (512)
Q Consensus 392 ~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~ 471 (512)
.||.+|+|+++|++|+|.+||+.|. .+|+|.+++|++.+. ..+ +.++++++++++.. .+.+++.+++ .++|+
T Consensus 425 ~GR~~~~i~~~G~~i~p~eIE~~l~-~~~~v~~~~v~~~~~-~~~-~~~~~~vv~~~~~~-~~~~~l~~~~----~~~l~ 496 (540)
T PRK06164 425 QTRMGDSLRLGGFLVNPAEIEHALE-ALPGVAAAQVVGATR-DGK-TVPVAFVIPTDGAS-PDEAGLMAAC----REALA 496 (540)
T ss_pred EeecCCeEEECCEEcCHHHHHHHHH-hCCCceeEEEEecCC-CCc-eeEEEEEEeCCCCC-CCHHHHHHHH----Hhhcc
Confidence 9999999999999999999999998 899999999999874 344 68999999877654 5655555554 56788
Q ss_pred CccceeeEEEecCCCCCCCc---hHHHHHHHHHHHhhhhc
Q 010344 472 PLFKVSLVKIVLEFPRTASN---KLLRRVLKDQLKHELSV 508 (512)
Q Consensus 472 ~~~~p~~i~~~~~iP~t~~G---Ki~r~~l~~~~~~~~~~ 508 (512)
+|++|..|++++++|+|++| |++|++|++++++....
T Consensus 497 ~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~~ 536 (540)
T PRK06164 497 GFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLAA 536 (540)
T ss_pred cCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhhh
Confidence 99999999999999999999 99999999998865543
No 93
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-59 Score=566.70 Aligned_cols=464 Identities=20% Similarity=0.220 Sum_probs=377.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++++....
T Consensus 546 ~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lail~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~---- 621 (3956)
T PRK12467 546 QANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLAVLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLA---- 621 (3956)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhh----
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999974221
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.+ ..........+... .+...... ...+.....++++++++|||||||.||||++
T Consensus 622 --~~---~~~~~~~~~~~~~~---------------~~~~~~~~-----~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~ 676 (3956)
T PRK12467 622 --QL---PVPAGLRSLCLDEP---------------ADLLCGYS-----GHNPEVALDPDNLAYVIYTSGSTGQPKGVAI 676 (3956)
T ss_pred --hc---ccccCccEEEeccc---------------cccccccC-----CCCCCCCCCCCCeEEEEECCCCCCCcCEEEE
Confidence 00 00000111111100 00000000 1111233467899999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC--CchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS--PLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|+++.+.+.+....+++.++|+++...|++|..+.+.++.+++.|+++++.+.. .++..+++.|+++++|++.++|+
T Consensus 677 th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps 756 (3956)
T PRK12467 677 SHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPS 756 (3956)
T ss_pred ecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHH
Confidence 9999999998888888999999999999999999999999999999999998754 46789999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCC---ccccccccc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQ---AFGAFSTAT 315 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~---~~~~~G~p~ 315 (512)
++..|++... .....++|.+++|||++++++.+.+.+.++++++++.||+||++..++........ ...++|+|+
T Consensus 757 ~~~~l~~~~~--~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~ 834 (3956)
T PRK12467 757 HLQALLQASR--VALPRPQRALVCGGEALQVDLLARVRALGPGARLINHYGPTETTVGVSTYELSDEERDFGNVPIGQPL 834 (3956)
T ss_pred HHHHHHhhhc--cccCCcccEEEEEeecCCHHHHHHHHHhCCCCEEEeCcCCChhhhheeeEecccccccCCCCcccCCc
Confidence 9999987532 22346789999999999999999999887788999999999998765543332211 235799999
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcc-cCceeeeecceEEEeCCCeEEEEe
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIY-KGMHLRRHGDIIKRTVGGYIIVQG 393 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~i~g 393 (512)
++++++|+|++++++|.|+ .|||+| +++...+| +.+++.+...|..+++. ++.+||+|||+|++++||.++++|
T Consensus 835 ~~~~~~i~d~~~~~vp~G~--~GEL~i~G~~v~~GY--l~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~G 910 (3956)
T PRK12467 835 ANLGLYILDHYLNPVPVGV--VGELYIGGAGLARGY--HRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLG 910 (3956)
T ss_pred CCCEEEEECCCCCCCCCCC--ceEEEecccccchhh--cCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEec
Confidence 9999999999999999999 699999 66555433 33566677777777654 677899999999999999999999
Q ss_pred ccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCc
Q 010344 394 RADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPL 473 (512)
Q Consensus 394 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 473 (512)
|.||+||++|++|+|.|||++|. ++|+|.+++|++.++. .+ +.++++++..............+.+++++++.|+.|
T Consensus 911 R~d~~vki~G~rI~~~eIE~~L~-~~p~V~~a~v~~~~~~-~~-~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y 987 (3956)
T PRK12467 911 RMDHQVKIRGFRIELGEIEARLL-AQPGVREAVVLAQPGD-AG-LQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDY 987 (3956)
T ss_pred cccCeEEECCEecCHHHHHHHHH-hCCCcceEEEEEEcCC-CC-cEEEEEEEecccccccccccCHHHHHHHHHhhCchh
Confidence 99999999999999999999998 8999999999986543 44 689999986543221222334556777777899999
Q ss_pred cceeeEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 474 FKVSLVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 474 ~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
++|..|+++++||+|++||++|++|++...
T Consensus 988 ~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 1017 (3956)
T PRK12467 988 MVPAHLLLLDSLPLTPNGKLDRKALPKPDA 1017 (3956)
T ss_pred cCCceEeeecccCCCCCCCcCHhhcCCccc
Confidence 999999999999999999999999987653
No 94
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-58 Score=480.33 Aligned_cols=474 Identities=22% Similarity=0.255 Sum_probs=362.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+.++++++|||+++|++++|++|.++.+++.++++.++++++++++....
T Consensus 58 ~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~---- 133 (563)
T PRK06710 58 KVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFP---- 133 (563)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchh----
Confidence 367899999998 999999999999999999999999999999999999999999999999999999999874321
Q ss_pred ccchhhHHhcCCCceEEeeccCCccccc--------------------ccccCccHHHHhhccCCCCCCCCCCCCCCCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQ--------------------LRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVD 140 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (512)
.+..+.+.......++.......... .......|.++..... ..........+
T Consensus 134 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 206 (563)
T PRK06710 134 --RVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSESETIHLWNSVEKEVN-----TGVEVPCDPEN 206 (563)
T ss_pred --hhhccchhhccceeEEeccccccccccccccchhhcccccccccccccchhhhhhhhhhccc-----cccccccCCCC
Confidence 11111111111111111000000000 0000001222211100 01111122357
Q ss_pred CeEEEEecCCCCCCCceEEecCchhHHHHHHhhc-ccccc-CCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCc
Q 010344 141 SVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG-HIDMK-VGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPL 217 (512)
Q Consensus 141 ~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~-~~~~~-~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~ 217 (512)
++++++|||||||.||+|+++|.++..+...... .++.. .++++++..|++|.+++.. ++.+++.|+++++.+ ..+
T Consensus 207 ~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~ 285 (563)
T PRK06710 207 DLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIP-KFD 285 (563)
T ss_pred CEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcC-CCC
Confidence 8999999999999999999999998765433322 23343 3457889999999988754 667888999999865 567
Q ss_pred hhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCcccccee
Q 010344 218 ERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSY 297 (512)
Q Consensus 218 ~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 297 (512)
+..+++.|+++++|++.++|+++..++........+++++|.+++||+++++++.+++.+.+ +.++++.||+||++...
T Consensus 286 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 364 (563)
T PRK06710 286 MKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQEKFETVT-GGKLVEGYGLTESSPVT 364 (563)
T ss_pred HHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHHHHHHHHhh-CCCEecccccccCcccc
Confidence 78999999999999999999999999876555556778999999999999999999998877 78899999999998765
Q ss_pred cccCCCCCCcccccccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceee
Q 010344 298 IQGSMLQPQAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLR 375 (512)
Q Consensus 298 ~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (512)
...........+++|.|.+++.++++| +++.+++.|+ .|||++ ++..+.+| +.+++.+...+ .++||
T Consensus 365 ~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~--~Gel~v~g~~~~~gY--~~~~~~~~~~~-------~~g~~ 433 (563)
T PRK06710 365 HSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGE--IGEIVVKGPQIMKGY--WNKPEETAAVL-------QDGWL 433 (563)
T ss_pred ccCcccccccCCccCCCCCCCeEEEEECCCCccCCCCC--ceEEEEecCccchhh--hCChHHHhhhc-------ccCcc
Confidence 443332333457899999999999998 6788999998 699999 54444322 22333333333 24699
Q ss_pred eecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcH
Q 010344 376 RHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPV 455 (512)
Q Consensus 376 ~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~ 455 (512)
+|||+++++++|+++++||.+|+|+++|.+|+|.+||++|. .+|.|.+++|++.++...+ +.++++++..++.. .+.
T Consensus 434 ~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~-~~~ 510 (563)
T PRK06710 434 HTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLY-EHEKVQEVVTIGVPDPYRG-ETVKAFVVLKEGTE-CSE 510 (563)
T ss_pred cccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHH-hCcceeeEEEEccccCCcC-ceeEEEEEECCCCC-CCH
Confidence 99999999999999999999999999999999999999998 8999999999999988878 88999999887654 555
Q ss_pred HHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhh
Q 010344 456 DKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHEL 506 (512)
Q Consensus 456 ~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~ 506 (512)
+++.++ +.+++++|+.|..|+++++||+|++||++|+.|++++..+-
T Consensus 511 ~~l~~~----~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~ 557 (563)
T PRK06710 511 EELNQF----ARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKN 557 (563)
T ss_pred HHHHHH----HHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcC
Confidence 555554 45678899999999999999999999999999999887543
No 95
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-58 Score=469.70 Aligned_cols=425 Identities=20% Similarity=0.195 Sum_probs=343.0
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccccchhhHHhcCCC
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPL 93 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 93 (512)
++++|+|+++++|++++++++|||+++|++++|+++..+.+++..+++++++++++++.... . ...+.
T Consensus 42 L~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~-----~-------~~~~~ 109 (471)
T PRK07787 42 VAGARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDD-----P-------AGLPH 109 (471)
T ss_pred hccCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCcc-----c-------ccccc
Confidence 45789999999999999999999999999999999999999999999999999999986210 0 00000
Q ss_pred ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh
Q 010344 94 KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW 173 (512)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~ 173 (512)
..... ....|. ......++++++++|||||||.||+|+++|.++..++....
T Consensus 110 ~~~~~-------------~~~~~~---------------~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~ 161 (471)
T PRK07787 110 VPVRL-------------HARSWH---------------RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALA 161 (471)
T ss_pred eeeec-------------cccccc---------------cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHH
Confidence 00000 000000 01123568899999999999999999999999999888777
Q ss_pred ccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHHHHHHccCCCCCC
Q 010344 174 GHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGL 252 (512)
Q Consensus 174 ~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~ 252 (512)
..+++..++++++.+|++|.+++.. ++.++..|+++++.+ ..++..+++.++ +++|++.++|+++..|++... ...
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~ 238 (471)
T PRK07787 162 EAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-AAR 238 (471)
T ss_pred HhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-ccc
Confidence 7788899999999999999999875 889999999998865 567899999999 999999999999999887532 234
Q ss_pred CcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeCCCCCCCCC
Q 010344 253 DWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPD 332 (512)
Q Consensus 253 ~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~ 332 (512)
+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++....... ......+++|.|++++.++|+|+++.+++.
T Consensus 239 ~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~ 316 (471)
T PRK07787 239 ALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTRA-DGERRPGWVGLPLAGVETRLVDEDGGPVPH 316 (471)
T ss_pred cccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecCC-CCcccCCcccccCCCcEEEEECCCCCCCCC
Confidence 678999999999999999999998877 688999999999986543332 233446789999999999999998988873
Q ss_pred -CCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEecc-CceeeecceecchH
Q 010344 333 -DQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRA-DDTMNLGGIKTSSV 409 (512)
Q Consensus 333 -g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~-~d~i~~~G~~v~~~ 409 (512)
|+ .+|||++ ++..+.+ ++.+++.+...| ..++||+|||+|++++||+++++||. +|+++.+|++|+|.
T Consensus 317 ~~~-~~Gei~v~g~~~~~g--y~~~~~~t~~~~------~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~ 387 (471)
T PRK07787 317 DGE-TVGELQVRGPTLFDG--YLNRPDATAAAF------TADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAG 387 (471)
T ss_pred CCC-CceEEEEECcccchh--hcCChhhchhcc------cCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHH
Confidence 42 1599999 4443332 222333333333 23579999999999999999999996 89999999999999
Q ss_pred HHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCC
Q 010344 410 EIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTA 489 (512)
Q Consensus 410 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~ 489 (512)
+||++|. .++.|.+++|++.++...+ +.++++|+..++ .+.+++. ++++++|++|+.|..|+++++||+|.
T Consensus 388 eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~v~~~~~---~~~~~l~----~~l~~~l~~~~~P~~i~~~~~iP~~~ 458 (471)
T PRK07787 388 EIETALL-GHPGVREAAVVGVPDDDLG-QRIVAYVVGADD---VAADELI----DFVAQQLSVHKRPREVRFVDALPRNA 458 (471)
T ss_pred HHHHHHH-hCCCcceEEEEcccccccC-eEEEEEEEeCCC---CCHHHHH----HHHHhhcccccCCcEEEEeccCCCCC
Confidence 9999998 8999999999999888777 899999998432 4454554 44557788999999999999999999
Q ss_pred CchHHHHHHHHH
Q 010344 490 SNKLLRRVLKDQ 501 (512)
Q Consensus 490 ~GKi~r~~l~~~ 501 (512)
+||++|+.|+++
T Consensus 459 ~GKi~r~~L~~~ 470 (471)
T PRK07787 459 MGKVLKKQLLSE 470 (471)
T ss_pred CccccHHHhccC
Confidence 999999999753
No 96
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.5e-58 Score=470.25 Aligned_cols=468 Identities=19% Similarity=0.135 Sum_probs=369.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++...
T Consensus 20 ~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~~~~~----- 94 (502)
T PRK08276 20 RSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSAALA----- 94 (502)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEccchh-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987432
Q ss_pred ccchhhHHhcCC--CceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVAEAGP--LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
.......+... ...+.+.. .. ......|++....... ......++.++++|||||||.||+|
T Consensus 95 -~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TSGtTG~PK~v 158 (502)
T PRK08276 95 -DTAAELAAELPAGVPLLLVVA-GP------VPGFRSYEEALAAQPD--------TPIADETAGADMLYSSGTTGRPKGI 158 (502)
T ss_pred -hHHHHHhhhccccccEEEEeC-CC------CCccccHHHHHhcCCC--------CCCCCCCcceEEEECCCCCCCCceE
Confidence 22222222221 11121111 10 0122345554432111 1112446689999999999999999
Q ss_pred EecCchhHHHH------HHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceE
Q 010344 159 PWTQLSPIRCA------AEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSV 232 (512)
Q Consensus 159 ~~s~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~ 232 (512)
+++|.++.... ...........++++++..|++|..++...+.++..|+++++.+ ..++..+++.++++++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~ 237 (502)
T PRK08276 159 KRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME-KFDAEEALALIERYRVTH 237 (502)
T ss_pred EEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC-CCCHHHHHHHHHHhCCeE
Confidence 99988764322 11111222357788999999999999887778999999998865 567899999999999999
Q ss_pred EecchHHHHHHHccCCC--CCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccc
Q 010344 233 LGTVPSLVKAWKNTNCL--QGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGA 310 (512)
Q Consensus 233 l~~~P~~~~~l~~~~~~--~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~ 310 (512)
+.++|+++..+++.... ...+++++|.++++|++++.++.+++.+.+ +.++++.||+||++.+.+..........++
T Consensus 238 ~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 316 (502)
T PRK08276 238 SQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITSEDWLAHPGS 316 (502)
T ss_pred EEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecCccccccCCC
Confidence 99999999999876432 345688999999999999999999999877 677999999999987554433322344578
Q ss_pred cccccCCccEEEeCCCCCCCCCCCCcccccccc-cccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeE
Q 010344 311 FSTATMTTGFVILDELGVPYPDDQPCVGEVGLF-PLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYI 389 (512)
Q Consensus 311 ~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l 389 (512)
+|.|+ ++.++|+|+++.+++.|+ .||++++ +....+ ++.+++.+...+ ..++||+|||+++++++|.+
T Consensus 317 ~G~~~-~~~~~i~d~~~~~~~~g~--~Gel~v~~~~~~~g--y~~~~~~~~~~~------~~~~~~~TGD~~~~~~~g~~ 385 (502)
T PRK08276 317 VGKAV-LGEVRILDEDGNELPPGE--IGTVYFEMDGYPFE--YHNDPEKTAAAR------NPHGWVTVGDVGYLDEDGYL 385 (502)
T ss_pred cceec-ccEEEEECCCCCCCcCCC--ceEEEEECCCccch--hcCCHHHHHHHh------cCCCceeecceEEEcCCcCE
Confidence 99999 889999999999999998 6999994 544432 222333333333 23379999999999999999
Q ss_pred EEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhc
Q 010344 390 IVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRN 469 (512)
Q Consensus 390 ~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~ 469 (512)
++.||.+|+++.+|.+|+|.+||.+|. ++|+|.++++++..++..+ +.++++|+++++.. ..+++.+.+++.++++
T Consensus 386 ~~~GR~~~~i~~~G~~v~~~~iE~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~--~~~~~~~~i~~~~~~~ 461 (502)
T PRK08276 386 YLTDRKSDMIISGGVNIYPQEIENLLV-THPKVADVAVFGVPDEEMG-ERVKAVVQPADGAD--AGDALAAELIAWLRGR 461 (502)
T ss_pred EEeccCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeCCCcccC-ceEEEEEEECCCCC--CChhhHHHHHHHHHhh
Confidence 999999999999999999999999998 8999999999999988777 89999999987643 2344556777788889
Q ss_pred cCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhh
Q 010344 470 LNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELS 507 (512)
Q Consensus 470 l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 507 (512)
|++++.|..+++++++|+|++||++|+.|++.+.+.-+
T Consensus 462 l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~~ 499 (502)
T PRK08276 462 LAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGRQ 499 (502)
T ss_pred ccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999876543
No 97
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.1e-59 Score=572.61 Aligned_cols=458 Identities=19% Similarity=0.195 Sum_probs=373.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++++.....
T Consensus 2037 ~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~--- 2113 (5163)
T PRK12316 2037 RANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLER--- 2113 (5163)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhh---
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999998753210
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
+........+.+. . ...+.+ . ....+.....++++++++|||||||.||||++
T Consensus 2114 ------~~~~~~~~~~~~~--~----------~~~~~~---~------~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~ 2166 (5163)
T PRK12316 2114 ------LPLPAGVARLPLD--R----------DAEWAD---Y------PDTAPAVQLAGENLAYVIYTSGSTGLPKGVAV 2166 (5163)
T ss_pred ------cccccccceEecc--c----------hhhhhc---c------CccCCCCCCCCCCeEEEEeCccCCCCCCEeEE
Confidence 0000000111110 0 000100 0 01112233467899999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC-CCchhhHHHHHHhcCceEEecchHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG-SPLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
+|+++.+.+.+....+++.++|+++.+.|++|..+.+.++.+|+.|+++++.+. ..++..+++.++++++|++.++|++
T Consensus 2167 ~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~ 2246 (5163)
T PRK12316 2167 SHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVY 2246 (5163)
T ss_pred ccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHH
Confidence 999999999888888899999999999999999998889999999999977553 3467899999999999999999999
Q ss_pred HHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCC----ccccccccc
Q 010344 240 VKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQ----AFGAFSTAT 315 (512)
Q Consensus 240 ~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~----~~~~~G~p~ 315 (512)
+..|........ ...+||.+++|||++++++.+.|.+.+++.++++.||+||++...+........ ...++|+|+
T Consensus 2247 ~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~ 2325 (5163)
T PRK12316 2247 LQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRAL 2325 (5163)
T ss_pred HHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeecccccccCCCcCCccccc
Confidence 999877543222 234899999999999999999998888788899999999998755433221111 225799999
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCccc-CceeeeecceEEEeCCCeEEEEe
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYK-GMHLRRHGDIIKRTVGGYIIVQG 393 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~g 393 (512)
++++++|+|++++++|.|. +|||+| +++...+| +.+++.+...|..++... +++||+|||+|++++||.++++|
T Consensus 2326 ~~~~~~i~d~~~~~vp~g~--~GEl~i~G~~v~~GY--~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~G 2401 (5163)
T PRK12316 2326 GNRRAYILDADLNLLAPGM--AGELYLGGEGLARGY--LNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLG 2401 (5163)
T ss_pred CCCEEEEECCCCCCCCCCC--eeEEEecchhhcccc--cCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEec
Confidence 9999999999999999999 799999 66555432 335566777776666543 67899999999999999999999
Q ss_pred ccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCc
Q 010344 394 RADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPL 473 (512)
Q Consensus 394 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 473 (512)
|+||+||++|++|+|.|||++|. ++|+|.+++|++.++. .+ +.++++|+..++.. .+.++ +++++.++|+.|
T Consensus 2402 R~d~~iki~G~rie~~eIE~~l~-~~~~v~~a~v~~~~~~-~~-~~l~a~v~~~~~~~-~~~~~----l~~~l~~~Lp~~ 2473 (5163)
T PRK12316 2402 RIDHQVKIRGFRIELGEIEARLQ-AHPAVREAVVVAQDGA-SG-KQLVAYVVPDDAAE-DLLAE----LRAWLAARLPAY 2473 (5163)
T ss_pred CCCCeEEEcCccCChHHHHHHHh-hCcccceEEEEEEecC-CC-eEEEEEEEecCCCc-cCHHH----HHHHHHhhCchh
Confidence 99999999999999999999998 8999999999988765 55 79999999877543 44444 555556789999
Q ss_pred cceeeEEEecCCCCCCCchHHHHHHHHHH
Q 010344 474 FKVSLVKIVLEFPRTASNKLLRRVLKDQL 502 (512)
Q Consensus 474 ~~p~~i~~~~~iP~t~~GKi~r~~l~~~~ 502 (512)
++|..|+++++||+|++||++|++|++..
T Consensus 2474 ~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2474 MVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred cCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 99999999999999999999999998654
No 98
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-58 Score=499.71 Aligned_cols=457 Identities=15% Similarity=0.107 Sum_probs=341.4
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|++. +++||+|+|+++|+++++++++||+++|++++|++|. .++.+++++++++++|+++...
T Consensus 481 ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~----- 552 (994)
T PRK07868 481 RINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNL----- 552 (994)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHH-----
Confidence 478999999999 9999999999999999999999999999999999985 6899999999999999986432
Q ss_pred ccchhhHHhcCCCceEEeeccCCccccccc--ccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLR--QQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
..+.. ....++++.. ......... .....++++...... ...........++++++|+|| ||||.||++
T Consensus 553 ----~~~~~-~~~~iiv~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk 623 (994)
T PRK07868 553 ----EAARQ-LPGRVLVLGG-GESRDLDLPDDADVIDMEKIDPDAVE--LPGWYRPNPGLARDLAFIAFS-TAGGELVAK 623 (994)
T ss_pred ----HHHHh-cCceEEEecC-CccccccCCcchhhhhhhhcCccccc--CCcccCCCCCCCCccEEEEEe-CCCCCcCcE
Confidence 11211 1222333221 100000000 011112211110000 000001112235789999998 578888888
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
.++|.++..+.......+++.++|++++..|++|.+++...+.+++.|++.+++....+++.+++.|+++++|+++++|+
T Consensus 624 ~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps 703 (994)
T PRK07868 624 QITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWA 703 (994)
T ss_pred EEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHH
Confidence 88887765554444456678899999999999999999775544445555444455678899999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCc
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTT 318 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~ 318 (512)
++..|++.......+++++|.++. +.+++++.+.+.+.++.+++++.||+||++..... . .....+++|+|++++
T Consensus 704 ~l~~L~~~~~~~~~~~~slr~~~g--~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~-~--~~~~~~svG~p~pg~ 778 (994)
T PRK07868 704 MLREVVDDPAFVLHGNHPVRLFIG--SGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLAN-V--SGAKIGSKGRPLPGA 778 (994)
T ss_pred HHHHHHhCcCCccCCCCceEEEec--CCCCHHHHHHHHHHhCchheeeeeecccccccccc-c--CCCCCcccCCccCCC
Confidence 999998765444456789998763 34899999999998877889999999998764322 1 223567999999998
Q ss_pred -cEEEe-----------CCCC--CCCCCCCCcccccccc-cccccccccccccCc--ceeEEecCCcccCceeeeecceE
Q 010344 319 -GFVIL-----------DELG--VPYPDDQPCVGEVGLF-PLYLGATDRLLNADH--EEVYFSGMPIYKGMHLRRHGDII 381 (512)
Q Consensus 319 -~~~i~-----------d~~~--~~~~~g~~~~Gel~v~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~TGD~~ 381 (512)
+++|. |++| ++++.|+ .|||+++ +.++ +++. +..+|. +++|||+|||+|
T Consensus 779 ~~v~i~~~d~~~g~li~d~~G~~~~~~~ge--~Gel~~~~~~~~-------~p~~t~~~~~~~-----~~dgw~~TGDlg 844 (994)
T PRK07868 779 GRVELAAYDPEHDLILEDDRGFVRRAEVNE--VGVLLARARGPI-------DPTASVKRGVFA-----PADTWISTEYLF 844 (994)
T ss_pred CceeEEEecCcCCceeecCCceEEEcCCCC--ceEEEEecCCCC-------ChhhhhHhcccc-----cCCEEEeccceE
Confidence 66653 4556 5678888 6999994 3332 2211 122332 357999999999
Q ss_pred EEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHH
Q 010344 382 KRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMI 461 (512)
Q Consensus 382 ~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~ 461 (512)
++|+||+++|+||.||+||++|.+|+|.|||++|. +||.|.+++|++++++. + +.++++|+++++.. .+.++|.++
T Consensus 845 ~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~-~hp~V~~aaVvg~~d~~-~-~~~~a~Vv~~~~~~-~~~~~L~~~ 920 (994)
T PRK07868 845 RRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALG-RIGGVDLAVTYGVEVGG-R-QLAVAAVTLRPGAA-ITAADLTEA 920 (994)
T ss_pred EEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHh-cCCCeeEEEEEeecCCC-C-ceEEEEEEeCCCCc-CCHHHHHHH
Confidence 99999999999999999999999999999999998 99999999999998865 5 78999999987655 666666666
Q ss_pred HHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHH
Q 010344 462 FSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 462 ~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~ 503 (512)
++ + +++|++|..|+++++||+|++||++|++|++...
T Consensus 921 l~----~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 921 LA----S-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred HH----h-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCC
Confidence 64 3 7899999999999999999999999999987644
No 99
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=7.8e-58 Score=473.34 Aligned_cols=485 Identities=20% Similarity=0.212 Sum_probs=364.3
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++++...
T Consensus 54 ~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~----- 128 (567)
T PLN02479 54 RCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFF----- 128 (567)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhh-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987532
Q ss_pred ccchhhHHhc---------CCCceEEeeccCCcc---cccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEec
Q 010344 81 FPLYSKVAEA---------GPLKAVVLPVIGDDV---GIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFS 148 (512)
Q Consensus 81 ~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 148 (512)
+....+... .....+++....... ......+...|.+++..... . .. .......+++++++||
T Consensus 129 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~~~~~~~i~yT 203 (567)
T PLN02479 129 -TLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKFLETGDP--E-FA-WKPPADEWQSIALGYT 203 (567)
T ss_pred -hHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHHHHHhcccc--c-cc-cCCCCCcccceEEEEC
Confidence 222222111 011222221110000 00011234457776654321 0 00 1112233567889999
Q ss_pred CCCCCCCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHH-hhhccCceEEEecCCCchhhHHHHHHh
Q 010344 149 SGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILF-SSFLSGAALALYHGSPLERSFGKFVQD 227 (512)
Q Consensus 149 SGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~l~~G~~~~~~~~~~~~~~~~~~l~~ 227 (512)
|||||.||+|++||.++..........+++..++++++..|++|..++...+ ..+..|.++++ . ..++..+++.+++
T Consensus 204 SGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~l~~ 281 (567)
T PLN02479 204 SGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICL-R-QVTAKAIYSAIAN 281 (567)
T ss_pred CCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhHHHHHHHHhhcCceEec-c-CCCHHHHHHHHHH
Confidence 9999999999999999876665555566788899999999999999876544 34555555544 3 5678999999999
Q ss_pred cCceEEecchHHHHHHHccCCCCC-CCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC----
Q 010344 228 SGVSVLGTVPSLVKAWKNTNCLQG-LDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM---- 302 (512)
Q Consensus 228 ~~~t~l~~~P~~~~~l~~~~~~~~-~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~---- 302 (512)
+++|++.++|+++..|++...... .++++++.++++|+++++.+.+.+.+. +.++++.||+||+++..+.+..
T Consensus 282 ~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~ 359 (567)
T PLN02479 282 YGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSEK--GFRVTHTYGLSETYGPSTVCAWKPEW 359 (567)
T ss_pred cCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHhc--CCceecccccccccccccceeccccc
Confidence 999999999999999887643322 357899999999999999999888764 6789999999998653332210
Q ss_pred -----CC-CCcccccccccCCcc-EEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCce
Q 010344 303 -----LQ-PQAFGAFSTATMTTG-FVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMH 373 (512)
Q Consensus 303 -----~~-~~~~~~~G~p~~~~~-~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (512)
.. .......|.+.+++. ++|+| +++++++.+....|||++ ++..+.+ ++.+++.+...|. ++
T Consensus 360 ~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~G--Y~~~~~~t~~~~~-------~g 430 (567)
T PLN02479 360 DSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKG--YLKNPKANEEAFA-------NG 430 (567)
T ss_pred cccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhh--hhcCcccccchhc-------CC
Confidence 00 011235677888876 88998 567888764212699999 5444332 2334444444332 46
Q ss_pred eeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCC
Q 010344 374 LRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQ 453 (512)
Q Consensus 374 ~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~ 453 (512)
||+|||+|+++++|+++++||.+|+|+.+|++|+|.+||.+|. .||.|.+++|++.++...+ +.+++++++.++....
T Consensus 431 ~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~ 508 (567)
T PLN02479 431 WFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVY-THPAVLEASVVARPDERWG-ESPCAFVTLKPGVDKS 508 (567)
T ss_pred ceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHH-hCcccceeeEEeccchhcC-ceeEEEEEecCccccc
Confidence 9999999999999999999999999999999999999999998 8999999999999887777 8999999988764322
Q ss_pred cHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh-hhhcccCC
Q 010344 454 PVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH-ELSVRSRI 512 (512)
Q Consensus 454 ~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~-~~~~~~~~ 512 (512)
+.+.+.+.+.+++.++|++|+.|..+.+ ++||+|++||++|+.|++.+.. +...++||
T Consensus 509 ~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~~~~~~~~~ 567 (567)
T PLN02479 509 DEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEMGPVKKSRL 567 (567)
T ss_pred chhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhhCCcccccC
Confidence 3345566778888889999999988876 6799999999999999998886 66667775
No 100
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.1e-59 Score=489.34 Aligned_cols=477 Identities=15% Similarity=0.126 Sum_probs=346.5
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++....
T Consensus 130 ~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~----- 204 (700)
T PTZ00216 130 RIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV----- 204 (700)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH-----
Confidence 378999999999 99999999999999999999999999999999999999999999999999999999987421
Q ss_pred ccchhhHHhc--CCCceEEeeccCCccc-ccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 81 FPLYSKVAEA--GPLKAVVLPVIGDDVG-IQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 81 ~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
..+...... .+...++.. ...... ........+|.++...+..... .........++++++++|||||||.|||
T Consensus 205 -~~l~~~~~~~~~~~~~ii~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~iiyTSGTTG~PKG 281 (700)
T PTZ00216 205 -PNLLRLMKSGGMPNTTIIYL-DSLPASVDTEGCRLVAWTDVVAKGHSAGS-HHPLNIPENNDDLALIMYTSGTTGDPKG 281 (700)
T ss_pred -HHHHHhhhhccCCceEEEEE-CCCccccccCCceEEEHHHHHHhCCcccc-ccccCCCCCcccEEEEEEeCCCCCcCcE
Confidence 111111111 111112211 111000 0011234578888765521001 1111233467899999999999999999
Q ss_pred EEecCchhHHHHHHhhccc----c-ccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHH-------HH
Q 010344 158 IPWTQLSPIRCAAEAWGHI----D-MKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGK-------FV 225 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~----~-~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-------~l 225 (512)
|++||+++.+.+......+ + +.++|++++++|++|.+++......+..|+++++.+ +..+++ .+
T Consensus 282 V~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~----~~~l~~~~~~~~~~l 357 (700)
T PTZ00216 282 VMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFGS----PRTLTDTFARPHGDL 357 (700)
T ss_pred EEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEECC----HHHhhhhhccccchH
Confidence 9999999998876654333 2 367899999999999999866556677888776632 334433 68
Q ss_pred HhcCceEEecchHHHHHHHccCCC-------------------------CCC----------------CcCceeEEEeec
Q 010344 226 QDSGVSVLGTVPSLVKAWKNTNCL-------------------------QGL----------------DWTKIRSFASTG 264 (512)
Q Consensus 226 ~~~~~t~l~~~P~~~~~l~~~~~~-------------------------~~~----------------~l~~l~~i~~~G 264 (512)
++++||++.++|.+++.+.+.... .+. ..+++|.+++||
T Consensus 358 ~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GG 437 (700)
T PTZ00216 358 TEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGG 437 (700)
T ss_pred HHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECC
Confidence 999999999999999887542100 000 015799999999
Q ss_pred CCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeCCCCC--CCCCCCCccccccc
Q 010344 265 ETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGV--PYPDDQPCVGEVGL 342 (512)
Q Consensus 265 ~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~--~~~~g~~~~Gel~v 342 (512)
+++++++.++++..+ + +++++||+||+++..+.... .....+++|.|+++++++|+|+++. ..+++. .|||+|
T Consensus 438 a~l~~~~~~~~~~~~-~-~l~~~YG~TEt~~~~~~~~~-~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~--~GEL~v 512 (700)
T PTZ00216 438 GPLSAATQEFVNVVF-G-MVIQGWGLTETVCCGGIQRT-GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEP--RGEILL 512 (700)
T ss_pred CCCCHHHHHHHHHHh-h-hHhhccCcccccccccccCC-CCCCCCCcCCcCCCeEEEEeechhhccCCCCCC--CceEEE
Confidence 999999998887666 5 89999999999865443322 3345689999999999999996542 234444 599999
Q ss_pred -ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceee-ecceecchHHHHHhhhcCCc
Q 010344 343 -FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDGADE 420 (512)
Q Consensus 343 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~-~~G~~v~~~~iE~~l~~~~~ 420 (512)
++.++.+| +.+++.+...| ..+|||+|||+|++|+||+++|+||.||+|| .+|++|+|.+||+++. .||
T Consensus 513 rG~~v~~GY--~~~pe~T~~~f------~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~-~~p 583 (700)
T PTZ00216 513 RGPFLFKGY--YKQEELTREVL------DEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYG-QNE 583 (700)
T ss_pred cCCcccchh--cCChhHhhhhc------cccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHh-cCc
Confidence 56555432 33444444444 2357999999999999999999999999999 8999999999999998 899
Q ss_pred ceeee--eEEeeCCCCCCCceEEEEEEecCCC----------C-C----CcHHHHHHHHHHHH-----HhccCCccceee
Q 010344 421 SILET--AAISVSPAGGGPEVLVICVVLKKGF----------T-S----QPVDKLKMIFSKAI-----QRNLNPLFKVSL 478 (512)
Q Consensus 421 ~v~~~--~v~~~~~~~~~~~~~~a~v~~~~~~----------~-~----~~~~~l~~~~~~~~-----~~~l~~~~~p~~ 478 (512)
.|.++ +|+..++. ..++|+|++..+. . . .+..++.+.+.+.+ ++++..|.+++.
T Consensus 584 ~V~~~~~~v~~~~~~----~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~ 659 (700)
T PTZ00216 584 LVVPNGVCVLVHPAR----SYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRH 659 (700)
T ss_pred CcccceEEEEEecCC----ceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeE
Confidence 99973 44443321 5788888875321 0 0 11223334444433 247888999999
Q ss_pred EEEecC------CCCCCCchHHHHHHHHHHHhhhhc
Q 010344 479 VKIVLE------FPRTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 479 i~~~~~------iP~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
|.++.+ =..|+++|++|+.+.+.|++.+++
T Consensus 660 ~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~~i~~ 695 (700)
T PTZ00216 660 VRVLSDEWTPENGVLTAAMKLKRRVIDERYADLIKE 695 (700)
T ss_pred EEEECCCCCCCCCCCChhhccchHHHHHHHHHHHHH
Confidence 998753 236999999999999999998875
No 101
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-57 Score=471.02 Aligned_cols=477 Identities=21% Similarity=0.223 Sum_probs=365.5
Q ss_pred cHHHHHHHHhc-c-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCc
Q 010344 2 SYRLVANALDT-M-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 79 (512)
Q Consensus 2 ~~~~~a~~L~~-~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~ 79 (512)
.++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++++++...
T Consensus 57 ~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---- 132 (560)
T PRK08974 57 RSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFA---- 132 (560)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEecccc----
Confidence 37899999985 6 99999999999999999999999999999999999999999999999999999999986422
Q ss_pred cccchhhHHhcCCCceEEeeccCCcccc-------------------cccccCccHHHHhhccCCCCCCCCCCCCCCCCC
Q 010344 80 KFPLYSKVAEAGPLKAVVLPVIGDDVGI-------------------QLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVD 140 (512)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (512)
..+..+........+++......... ...+...++.+....... .........++
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 206 (560)
T PRK08974 133 --HTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRR----MQYVKPELVPE 206 (560)
T ss_pred --HHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccCCCcccHHHHhhccCC----CCCCCCCCCCC
Confidence 22223222222222111110000000 000111222222222111 01111224578
Q ss_pred CeEEEEecCCCCCCCceEEecCchhHHHHHHhhccc---cccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCC
Q 010344 141 SVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHI---DMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSP 216 (512)
Q Consensus 141 ~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~ 216 (512)
++++++|||||||.||+|+++|.++..++......+ ....++.++..+|++|.+++.. .+.++..|+++++.....
T Consensus 207 ~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~ 286 (560)
T PRK08974 207 DLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPR 286 (560)
T ss_pred CeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCcc
Confidence 899999999999999999999999987665443222 2345667888899999988754 667788999888766555
Q ss_pred chhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccce
Q 010344 217 LERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASS 296 (512)
Q Consensus 217 ~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 296 (512)
++..+++.++++++|.+.++|+++..|+........+++++|.+++||+++++.+.+.+++.+ +.++++.||+||++..
T Consensus 287 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~ 365 (560)
T PRK08974 287 DIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLTECSPL 365 (560)
T ss_pred CHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCHHHHHHHHHHh-CCcEEeeecccccCce
Confidence 678899999999999999999999999877655556778999999999999999999988776 7899999999999887
Q ss_pred ecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceee
Q 010344 297 YIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLR 375 (512)
Q Consensus 297 ~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (512)
+..+........+++|.|++++.++|+|+++++++.|+ .|||++ ++....+ ++.+++.+...| .++||
T Consensus 366 ~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~--~Gel~v~g~~~~~g--y~~~~~~~~~~~-------~~g~~ 434 (560)
T PRK08974 366 VSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGE--PGELWVKGPQVMLG--YWQRPEATDEVI-------KDGWL 434 (560)
T ss_pred eeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCC--ceEEEEecCCcchh--hcCChhhhhhhh-------hcCCc
Confidence 66554433344678999999999999999999999999 699999 4443332 222333333222 24799
Q ss_pred eecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcH
Q 010344 376 RHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPV 455 (512)
Q Consensus 376 ~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~ 455 (512)
+|||+++++++|+++++||.+|+|+++|.+++|.+||++|. .+|+|.+++|++.++...+ +.+.++++..+. . .+.
T Consensus 435 ~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~-~-~~~ 510 (560)
T PRK08974 435 ATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVM-LHPKVLEVAAVGVPSEVSG-EAVKIFVVKKDP-S-LTE 510 (560)
T ss_pred ccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeeecCCcc-eEEEEEEECCCC-C-CCH
Confidence 99999999999999999999999999999999999999998 8999999999999888777 677777765432 2 344
Q ss_pred HHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhhc
Q 010344 456 DKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 456 ~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
++ +++++.++|++|+.|..+.+++++|+|++||++|+.|+++...+.++
T Consensus 511 ~~----l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~~~ 559 (560)
T PRK08974 511 EE----LITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAKVDN 559 (560)
T ss_pred HH----HHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhhhcc
Confidence 44 44455577889999999999999999999999999999998877654
No 102
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.4e-57 Score=469.60 Aligned_cols=470 Identities=20% Similarity=0.178 Sum_probs=358.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++++.. ..
T Consensus 55 ~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~----~~ 130 (541)
T TIGR03205 55 MAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLA----AL 130 (541)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCch----hh
Confidence 378999999999 9999999999999999999999999999999999999999999999999999999998631 01
Q ss_pred ccchhhHHhcC-CCceEEeeccCCc-c-----cccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010344 81 FPLYSKVAEAG-PLKAVVLPVIGDD-V-----GIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTG 153 (512)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 153 (512)
.+......... ....++....... . .........++++++..... ........++++++++|||||||
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG 205 (541)
T TIGR03205 131 LPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVKGAAA-----PAEWPAVTPDDVALLQYTGGTTG 205 (541)
T ss_pred hHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHhcCCC-----CCCCCCCCccCeEEEEECCCCCC
Confidence 11111111111 1112222211000 0 00111234556666543221 11112345678999999999999
Q ss_pred CCceEEecCchhHHHHHHhhc-----cccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHh
Q 010344 154 EPKAIPWTQLSPIRCAAEAWG-----HIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQD 227 (512)
Q Consensus 154 ~pK~v~~s~~~~~~~~~~~~~-----~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~ 227 (512)
.||+|+++|.++......... .......+++++..|++|.+++.. ++.++..|+++++.. ..+++.+++.|++
T Consensus 206 ~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~ 284 (541)
T TIGR03205 206 LPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQ-RFDVAAVFRDIEE 284 (541)
T ss_pred CCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHH
Confidence 999999999998765432111 112234578899999999988765 778899999888764 5678999999999
Q ss_pred cCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCc
Q 010344 228 SGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQA 307 (512)
Q Consensus 228 ~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~ 307 (512)
+++|++.++|+++..|++.......+++++|.++.||+++++++.+++.+.+ +.++++.||+||++...+.........
T Consensus 285 ~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~ 363 (541)
T TIGR03205 285 KRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERKT-GLKLKSGWGMTETCSPGTGHPPEGPDK 363 (541)
T ss_pred cCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHHh-CCCeecccccccCCcccccCCCCCCCC
Confidence 9999999999999998876544455678999999999999999999888776 688999999999987665544333345
Q ss_pred ccccccccCCccEEEe--CCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEe
Q 010344 308 FGAFSTATMTTGFVIL--DELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRT 384 (512)
Q Consensus 308 ~~~~G~p~~~~~~~i~--d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~ 384 (512)
.+++|.|++++.++|. |+++++++.|+ .|||++ ++..+.+| +.+++.+...|. .+||+|||+++++
T Consensus 364 ~~~~G~~~~~~~~~v~~~d~~~~~~~~g~--~Gel~v~~~~~~~gy--~~~~~~~~~~~~-------~~~~~TGD~~~~~ 432 (541)
T TIGR03205 364 PGSIGLMLPGIELDVVSLDDPTKVLPPGE--VGELRIRGPNVTRGY--WNRPEESAEAFV-------GDRFLTGDIGYMD 432 (541)
T ss_pred CCCcceeccCceeEEEecCCCCccCCCCC--eeEEEEecCCccccc--cCChhhhHhhhc-------cCCcccCceEEEc
Confidence 5789999999998875 57788999998 699999 44433321 112222222231 3589999999999
Q ss_pred CCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHH
Q 010344 385 VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSK 464 (512)
Q Consensus 385 ~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~ 464 (512)
++|+++++||.+|+||++|++|+|.+||+++. +++.|.+++|++.+++..+ +.++++++++++....+.+++ ++
T Consensus 433 ~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l----~~ 506 (541)
T TIGR03205 433 TDGYFFLVDRKKDMIISGGFNVYPQMIEQAIY-EHPGVQEVIVIGIPDQYRG-EAAKAFVKLRPGAKPFSLDEL----RA 506 (541)
T ss_pred CCceEEEEccccCeEEECCEEECHHHHHHHHH-hCCCeeeEEEEecCCcccC-ceEEEEEEECCCCCcCCHHHH----HH
Confidence 99999999999999999999999999999998 8999999999999988777 789999998765432344444 44
Q ss_pred HHHhccCCccceeeEEEecCCCCCCCchHHHHHHH
Q 010344 465 AIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLK 499 (512)
Q Consensus 465 ~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~ 499 (512)
+++++|++|++|..|+++++||+|++||++|++|+
T Consensus 507 ~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 507 FLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred HHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 55678889999999999999999999999999874
No 103
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-57 Score=464.13 Aligned_cols=469 Identities=18% Similarity=0.138 Sum_probs=363.0
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++....
T Consensus 33 ~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~----- 107 (511)
T PRK13391 33 RSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKL----- 107 (511)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhH-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999997421
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.....+..........+...... .......+.+....... ....+.++.++++|||||||.||+|++
T Consensus 108 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~il~TSGtTG~PKgv~~ 174 (511)
T PRK13391 108 -DVARALLKQCPGVRHRLVLDGDG----ELEGFVGYAEAVAGLPA--------TPIADESLGTDMLYSSGTTGRPKGIKR 174 (511)
T ss_pred -HHHHHHHhcCCCceEEEEecCCC----CCcccccHHHHhcCCCC--------CCCCCcccccEEEECCCCCCCCCEEEE
Confidence 12222222222111111111000 00122234433321111 111234467899999999999999996
Q ss_pred c--CchhHHH---HHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 161 T--QLSPIRC---AAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 161 s--~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
+ |.++... .......+++..++++++..|++|..++...+.++..|+++++.+ ..++..+++.++++++|++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 253 (511)
T PRK13391 175 PLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVME-HFDAEQYLALIEEYGVTHTQL 253 (511)
T ss_pred ccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECC-CCCHHHHHHHHHHhCCeEEEe
Confidence 4 5554322 223334566788999999999999988877788899999999875 567899999999999999999
Q ss_pred chHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCccccccc
Q 010344 236 VPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFST 313 (512)
Q Consensus 236 ~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~ 313 (512)
+|+++..+++... ....+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++.+............+++|.
T Consensus 254 ~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~ 332 (511)
T PRK13391 254 VPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGFTACDSEEWLAHPGTVGR 332 (511)
T ss_pred hHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccceEEecCccccccCCCcCC
Confidence 9999998876432 2344678999999999999999999998876 678999999999987644332222345578999
Q ss_pred ccCCccEEEeCCCCCCCCCCCCcccccccccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEe
Q 010344 314 ATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQG 393 (512)
Q Consensus 314 p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~g 393 (512)
|+++ .++|+|+++.+++.|+ .|||+++...+. .++.+++.+...+. ..++||+|||+|+++++|.+++.|
T Consensus 333 ~~~g-~~~i~d~~~~~~~~g~--~Gel~~~g~~~~--gy~~~~~~~~~~~~-----~~~~w~~TGD~g~~~~~g~l~~~g 402 (511)
T PRK13391 333 AMFG-DLHILDDDGAELPPGE--PGTIWFEGGRPF--EYLNDPAKTAEARH-----PDGTWSTVGDIGYVDEDGYLYLTD 402 (511)
T ss_pred cccc-eEEEECCCCCCCCCCC--ceEEEEecCcce--EEcCChhHhHHhhc-----cCCCEEecCCEEEECCCccEEEec
Confidence 9999 5999999999999998 699999433332 23333333333222 124899999999999999999999
Q ss_pred ccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCc
Q 010344 394 RADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPL 473 (512)
Q Consensus 394 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 473 (512)
|.+|+++.+|.+|+|.+||+++. +||.|.+++|++.+++..+ +.++++++..++.. ..+.+.+.++++++++|++|
T Consensus 403 R~~~~i~~~G~~v~~~eie~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~ 478 (511)
T PRK13391 403 RAAFMIISGGVNIYPQEAENLLI-THPKVADAAVFGVPNEDLG-EEVKAVVQPVDGVD--PGPALAAELIAFCRQRLSRQ 478 (511)
T ss_pred cCCCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEecCCcccC-ceeEEEEEECCCCC--cccchHHHHHHHHHhhcccC
Confidence 99999999999999999999998 8999999999999988888 78888888776432 22334566777777899999
Q ss_pred cceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 474 FKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 474 ~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+.|..|.+++++|+|++||++|+.|++.+.+
T Consensus 479 ~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 479 KCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred cCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 9999999999999999999999999998864
No 104
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3.2e-58 Score=558.80 Aligned_cols=461 Identities=16% Similarity=0.176 Sum_probs=379.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|.+. +++|++|++++++++++++++||++++|++++|++|.++.+++.+++++++++++++++...
T Consensus 3754 ~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~----- 3828 (4334)
T PRK05691 3754 AANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACR----- 3828 (4334)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCccc-----
Confidence 368999999999 99999999999999999999999999999999999999999999999999999999997532
Q ss_pred ccchhhHHhcCC---CceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 81 FPLYSKVAEAGP---LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 81 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
.....+..... ....++ +++...... ....+.....+++++|++|||||||+|||
T Consensus 3829 -~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~----~~~~~~~~~~~~~~ayvi~TSGSTG~PKG 3886 (4334)
T PRK05691 3829 -EQARALLDELGCANRPRLLV-----------------WEEVQAGEV----ASHNPGIYSGPDNLAYVIYTSGSTGLPKG 3886 (4334)
T ss_pred -chhhhhhcccccccccceee-----------------ecccccccc----cccCCCCCCCCCceEEEEECCCCCCCCCE
Confidence 11111211111 001111 011000000 01112233467889999999999999999
Q ss_pred EEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC--CchhhHHHHHHhcCceEEec
Q 010344 158 IPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS--PLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~l~~~~~t~l~~ 235 (512)
|+++|+++.+.+.+....++++++|+++...+++|..+.+.++.++..|+++++.+.. .++..+++.++++++|++.+
T Consensus 3887 V~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~ 3966 (4334)
T PRK05691 3887 VMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLES 3966 (4334)
T ss_pred EEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEe
Confidence 9999999999998888889999999999999999999999999999999999998753 35788999999999999999
Q ss_pred chHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCC---CCCcccccc
Q 010344 236 VPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML---QPQAFGAFS 312 (512)
Q Consensus 236 ~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~---~~~~~~~~G 312 (512)
+|+++..++... ...+++||.+++|||++++++.+.|.+.++++++++.||+||++..++..... ......++|
T Consensus 3967 ~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG 4043 (4334)
T PRK05691 3967 VPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIG 4043 (4334)
T ss_pred CHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCC
Confidence 999999887542 33567999999999999999999998888889999999999998765433221 112335799
Q ss_pred cccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcc-cCceeeeecceEEEeCCCeEE
Q 010344 313 TATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIY-KGMHLRRHGDIIKRTVGGYII 390 (512)
Q Consensus 313 ~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~ 390 (512)
+|+++++++|+|+.++++|.|. .|||+| ++....+| +.+++.+...|..+|.. .+++||+|||+|++++||.++
T Consensus 4044 ~p~~~~~~~v~d~~~~~~p~g~--~GEL~i~G~~v~~GY--~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~ 4119 (4334)
T PRK05691 4044 SPTDNNRLYLLDEALELVPLGA--VGELCVAGTGVGRGY--VGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLE 4119 (4334)
T ss_pred CccCCCEEEEECCCCCCCCCCC--ceEEEEecccccccc--cCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEE
Confidence 9999999999999999999999 799999 66665543 34566777777777663 578999999999999999999
Q ss_pred EEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhcc
Q 010344 391 VQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNL 470 (512)
Q Consensus 391 i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l 470 (512)
++||.|++||++|++|.+.|||++|. .+|+|.+++|+... ...+ +.++++++..++. ....++.+.++++++++|
T Consensus 4120 ~~GR~d~qvki~G~riel~eIE~~l~-~~~~v~~a~v~~~~-~~~~-~~l~a~~~~~~~~--~~~~~~~~~l~~~l~~~L 4194 (4334)
T PRK05691 4120 YVGRIDHQVKIRGYRIELGEIEARLH-EQAEVREAAVAVQE-GVNG-KHLVGYLVPHQTV--LAQGALLERIKQRLRAEL 4194 (4334)
T ss_pred EecccCCcEEeceEEecHHHHHHHHH-hCCCccEEEEEEec-CCCC-cEEEEEEeCCccc--ccchHHHHHHHHHHHhhC
Confidence 99999999999999999999999998 89999998876553 3445 7899999886653 234456677888899999
Q ss_pred CCccceeeEEEecCCCCCCCchHHHHHHHHH
Q 010344 471 NPLFKVSLVKIVLEFPRTASNKLLRRVLKDQ 501 (512)
Q Consensus 471 ~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~ 501 (512)
+.|++|..|+.+++||+|++||+||++|++.
T Consensus 4195 p~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4195 PDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred ChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 9999999999999999999999999999865
No 105
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.8e-57 Score=507.08 Aligned_cols=470 Identities=17% Similarity=0.148 Sum_probs=361.8
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
.++++|+.|++.+++||+|+++++|+++++++++||+++|++++|+||.++.+++.+++++++++++++++......+
T Consensus 667 ~~~~lA~~L~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~-- 744 (1140)
T PRK06814 667 GAFVLGRKLKKNTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKAR-- 744 (1140)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhc--
Confidence 368889888633999999999999999999999999999999999999999999999999999999999975431111
Q ss_pred cchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWT 161 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s 161 (512)
.....+..+....++...... .....++++...... ...........++|+++++|||||||.||+|++|
T Consensus 745 --~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s 814 (1140)
T PRK06814 745 --LGPLIEALEFGIRIIYLEDVR------AQIGLADKIKGLLAG--RFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLS 814 (1140)
T ss_pred --chhHHHHhccCceEEEehHhh------ccCChHHHHHHHhhc--cCCccccCCCCCCCcEEEEECCCccCCCcEEEec
Confidence 111111111111111111100 001111111111110 0000011134678999999999999999999999
Q ss_pred CchhHHHHHHhhccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 162 QLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
|+++.++.......+++.++|++++.+|++|.+++. .++.++..|+++++.+.....+.+.+.++++++|++.++|+++
T Consensus 815 h~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l 894 (1140)
T PRK06814 815 HRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFL 894 (1140)
T ss_pred HHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHH
Confidence 999998888877788899999999999999999984 4888999999999987555667788999999999999999999
Q ss_pred HHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccE
Q 010344 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGF 320 (512)
Q Consensus 241 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 320 (512)
..+.+.. ...+++++|.+++||+++++++.+.+.+.+ +.++++.||+||++........ .....+++|+|.+++++
T Consensus 895 ~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~g~~~ 970 (1140)
T PRK06814 895 NGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYGVTETAPVIALNTP-MHNKAGTVGRLLPGIEY 970 (1140)
T ss_pred HHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEeccccccccceEEecCC-CCCCCCcCCccCCCCeE
Confidence 9887653 346778999999999999999999998887 7899999999999876544322 23456799999999999
Q ss_pred EEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCcee
Q 010344 321 VILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTM 399 (512)
Q Consensus 321 ~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i 399 (512)
++.+.++ .|+ .|||++ ++..+.+ |.+.+.. ..+. ...+|||+|||+|++|+||+++++||.||+|
T Consensus 971 ~~~~~~~----~~~--~Gel~v~g~~~~~g---Y~~~~~~-~~~~----~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i 1036 (1140)
T PRK06814 971 RLEPVPG----IDE--GGRLFVRGPNVMLG---YLRAENP-GVLE----PPADGWYDTGDIVTIDEEGFITIKGRAKRFA 1036 (1140)
T ss_pred EEeecCC----CCC--ceEEEEeCCCcchh---hcCCCCC-Cccc----cCCCCeEecCCEEEECCCCeEEEEecccCee
Confidence 9987543 244 599999 5544433 2222211 1111 1256899999999999999999999999999
Q ss_pred eecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeE
Q 010344 400 NLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLV 479 (512)
Q Consensus 400 ~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i 479 (512)
|++|++|+|.|||+++. +|+.+.+++|++++++..+ +.+++++.. .+ .+.+++.+++++ .++++|++|..|
T Consensus 1037 ~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~~~~~g-~~~~~~~~~---~~-~~~~~l~~~~~~---~~l~~~~~P~~i 1107 (1140)
T PRK06814 1037 KIAGEMISLAAVEELAA-ELWPDALHAAVSIPDARKG-ERIILLTTA---SD-ATRAAFLAHAKA---AGASELMVPAEI 1107 (1140)
T ss_pred eeCCEEECHHHHHHHHH-hcCCcccEEEEEcccCCCC-ceEEEEEcC---CC-cCHHHHHHHHHH---cCCCcccCCcEE
Confidence 99999999999999998 8999999999999998888 777766542 22 455666665543 358899999999
Q ss_pred EEecCCCCCCCchHHHHHHHHHHHhhhhccc
Q 010344 480 KIVLEFPRTASNKLLRRVLKDQLKHELSVRS 510 (512)
Q Consensus 480 ~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~~ 510 (512)
++++++|+|++||++|++|++++.+.....+
T Consensus 1108 ~~v~~lP~t~~GKi~r~~L~~~~~~~~~~~~ 1138 (1140)
T PRK06814 1108 ITIDEIPLLGTGKIDYVAVTKLAEEAAAKPE 1138 (1140)
T ss_pred EEecCcCCCCCCCCcHHHHHHHHHHhhcccc
Confidence 9999999999999999999999988766543
No 106
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.7e-57 Score=552.36 Aligned_cols=455 Identities=19% Similarity=0.188 Sum_probs=372.5
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|++. +++|++|+++++|++++++++||++++|++++|++|.++.+++.+++++++++++++++....
T Consensus 1165 ~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~---- 1240 (4334)
T PRK05691 1165 QANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLE---- 1240 (4334)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhh----
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999874321
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.+... .. ...+.... ..... . ....+.....++++++++|||||||.||||++
T Consensus 1241 --~~~~~---~~--~~~~~~~~-----------~~~~~-----~----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~ 1293 (4334)
T PRK05691 1241 --RLPQA---EG--VSAIALDS-----------LHLDS-----W----PSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGN 1293 (4334)
T ss_pred --hcccc---cC--ceEEeecc-----------ccccc-----c----CCCCCCCCCCCCCeEEEEEcCCCCCCCceeEe
Confidence 11000 00 01110000 00000 0 00111123457889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC--CCchhhHHHHHHhcCceEEecchH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG--SPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
+|+++.+.+.+....+++.++|++++..|++|..+++.++.+|..|+++++.+. ..++..+++.++++++|++.++|+
T Consensus 1294 ~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps 1373 (4334)
T PRK05691 1294 THAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPP 1373 (4334)
T ss_pred ecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHH
Confidence 999999988888888899999999999999999999889999999999999764 346789999999999999999999
Q ss_pred HHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCC-CCCCcccccccccCC
Q 010344 239 LVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSM-LQPQAFGAFSTATMT 317 (512)
Q Consensus 239 ~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~~~~~~~~~G~p~~~ 317 (512)
++..|..... ..+++++|.+++|||++++++.+.+.+.+++.++++.||+||++..++.... .......++|+|+++
T Consensus 1374 ~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~ 1451 (4334)
T PRK05691 1374 LLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGN 1451 (4334)
T ss_pred HHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCC
Confidence 9999876532 3467899999999999999999999988888899999999999875543222 222345689999999
Q ss_pred ccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcc-cCceeeeecceEEEeCCCeEEEEecc
Q 010344 318 TGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIY-KGMHLRRHGDIIKRTVGGYIIVQGRA 395 (512)
Q Consensus 318 ~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~i~gR~ 395 (512)
+.++|+|++++++|.|. .|||+| +++...+| +.+++.+...|..+|.. .+.+||+|||+|++++||+++++||+
T Consensus 1452 ~~~~i~d~~~~~vp~G~--~GEL~i~G~~v~~GY--l~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~ 1527 (4334)
T PRK05691 1452 VLCRVLDAELNLLPPGV--AGELCIGGAGLARGY--LGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRL 1527 (4334)
T ss_pred CEEEEECCCCCCCCCCC--ceEEEecCcccchhh--cCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEeccc
Confidence 99999999999999999 699999 66555433 33556666667666654 36689999999999999999999999
Q ss_pred CceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccc
Q 010344 396 DDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFK 475 (512)
Q Consensus 396 ~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 475 (512)
||+||++|++|+|.|||++|. ++|+|.+++|+...+ ..+ +.++++++..++.. .+.+ .+++++.++|+.|++
T Consensus 1528 d~qiki~G~rie~~eIE~~l~-~~~~V~~a~v~~~~~-~~~-~~lva~~~~~~~~~-~~~~----~l~~~l~~~Lp~y~v 1599 (4334)
T PRK05691 1528 DQQVKLRGFRVEPEEIQARLL-AQPGVAQAAVLVREG-AAG-AQLVGYYTGEAGQE-AEAE----RLKAALAAELPEYMV 1599 (4334)
T ss_pred CcEEEECCEEcCHHHHHHHHH-hCCCcceEEEEEeeC-CCC-CEEEEEEEeCCCCC-CCHH----HHHHHHHHhCccccC
Confidence 999999999999999999998 899999999986654 344 68999998876543 4444 455556688999999
Q ss_pred eeeEEEecCCCCCCCchHHHHHHHHH
Q 010344 476 VSLVKIVLEFPRTASNKLLRRVLKDQ 501 (512)
Q Consensus 476 p~~i~~~~~iP~t~~GKi~r~~l~~~ 501 (512)
|..|+.+++||+|++||++|++|++.
T Consensus 1600 P~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1600 PAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred CcEEEEccccCCCCCCCcChhhcCcc
Confidence 99999999999999999999999764
No 107
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-56 Score=453.37 Aligned_cols=418 Identities=17% Similarity=0.147 Sum_probs=339.5
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++|+++..+.+++..++++++++++++++...
T Consensus 37 ~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 111 (458)
T PRK09029 37 RIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGEN----- 111 (458)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCccc-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999987421
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
....+ . . ..+.. . .........++++++++|||||||.||+|++
T Consensus 112 --~~~~~----~--~------------------~~~~~-----~-----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~ 155 (458)
T PRK09029 112 --TFSAL----T--S------------------LHLQL-----V-----EGAHAVAWQPQRLATMTLTSGSTGLPKAAVH 155 (458)
T ss_pred --chhhc----c--c------------------ccccc-----c-----cccCcccCCCCCeEEEEECCCCCCCCCEEEE
Confidence 00000 0 0 00000 0 0011223457889999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
||+++..........+++.++|+++...|++|.+++..++.++..|+++++.+. ..+++.++ ++|.+..+|+++
T Consensus 156 s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~----~~~~~~i~--~~t~~~~~P~~~ 229 (458)
T PRK09029 156 TAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK----QPLEQALA--GCTHASLVPTQL 229 (458)
T ss_pred eHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh----HHHHHHHh--hceeeecChHHH
Confidence 999999988888878889999999999999999998777888999999998663 45677774 799999999999
Q ss_pred HHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccE
Q 010344 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGF 320 (512)
Q Consensus 241 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 320 (512)
..++..... ..++|.+++||+++++.+.+.+.. + +.++++.||+||++...+.... ....++|.|++++++
T Consensus 230 ~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~-~-g~~~~~~YG~tE~~~~~~~~~~---~~~~~~G~~~~~~~~ 300 (458)
T PRK09029 230 WRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQ-Q-GIRCWCGYGLTEMASTVCAKRA---DGLAGVGSPLPGREV 300 (458)
T ss_pred HHHHhcccc----CCcceEEEECCCCCCHHHHHHHHH-c-CCcEeccccccccCcceeccCC---CCCCCCCCCCCCCEE
Confidence 998865432 347999999999999999888875 3 7889999999999875443222 123569999999999
Q ss_pred EEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCcee
Q 010344 321 VILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTM 399 (512)
Q Consensus 321 ~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i 399 (512)
+|.+ |||++ ++....+|. .+++.+ +...+++||+|||+|++| ||++++.||.+|+|
T Consensus 301 ~i~~-------------gel~v~g~~~~~gY~--~~~~~~-------~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i 357 (458)
T PRK09029 301 KLVD-------------GEIWLRGASLALGYW--RQGQLV-------PLVNDEGWFATRDRGEWQ-NGELTILGRLDNLF 357 (458)
T ss_pred EEeC-------------CEEEEecCceeeeee--cCcccc-------ccccCCCccCCCCcEEEe-CCEEEEecccccce
Confidence 9975 88888 444433221 122211 112356899999999999 99999999999999
Q ss_pred eecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeE
Q 010344 400 NLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLV 479 (512)
Q Consensus 400 ~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i 479 (512)
+.+|.+|+|.+||++|. ++|.|.+++|++.+++..+ +.++++|+++.. .+.+++ +++++++|++|++|..+
T Consensus 358 ~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~v~~~~~---~~~~~l----~~~~~~~l~~~~~P~~~ 428 (458)
T PRK09029 358 FSGGEGIQPEEIERVIN-QHPLVQQVFVVPVADAEFG-QRPVAVVESDSE---AAVVNL----AEWLQDKLARFQQPVAY 428 (458)
T ss_pred eeCCEEeCHHHHHHHHh-cCCCcceEEEEccCCcccC-ceEEEEEEcCcc---cCHHHH----HHHHHhhchhccCCeEE
Confidence 99999999999999998 8999999999999998888 889999987632 344444 44555788899999999
Q ss_pred EEecCCCCCCCchHHHHHHHHHHHhhhh
Q 010344 480 KIVLEFPRTASNKLLRRVLKDQLKHELS 507 (512)
Q Consensus 480 ~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 507 (512)
++++++|+|.+||++|+.|++++++..+
T Consensus 429 ~~~~~~p~t~~gKi~r~~L~~~~~~~~~ 456 (458)
T PRK09029 429 YLLPPELKNGGIKISRQALKEWVAQQLG 456 (458)
T ss_pred EEecccccCcCCCcCHHHHHHHHHhccC
Confidence 9999999999999999999999987654
No 108
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-56 Score=444.99 Aligned_cols=389 Identities=14% Similarity=0.124 Sum_probs=328.8
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
++++|++|. . +++|++|+++++|+++++++++|++++|++++|+++..+.+++..++++++++++++++...
T Consensus 18 ~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 90 (414)
T PRK08308 18 LQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYGESDF------ 90 (414)
T ss_pred HHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEecCccc------
Confidence 578888875 5 99999999999999999999999999999999999999999999999999999999876200
Q ss_pred cchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWT 161 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s 161 (512)
.. .. .....++++++++|||||||.||+|++|
T Consensus 91 ---------------~~------------------~~---------------~~~~~~~~~~~i~~TSGtTG~PKgv~~s 122 (414)
T PRK08308 91 ---------------TK------------------LE---------------AVNYLAEEPSLLQYSSGTTGEPKLIRRS 122 (414)
T ss_pred ---------------cc------------------cc---------------CCCCCCCCceEEEECCCCCCCCcEEEEe
Confidence 00 00 0012456799999999999999999999
Q ss_pred CchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 162 QLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
|+++.+++......+.+..+|+++...|++|.+++.. ++.++..|+++++.+ ..++..+++.++++++|+++++|+++
T Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~ 201 (414)
T PRK08308 123 WTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHILYAVPLML 201 (414)
T ss_pred hHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEEEcCHHHH
Confidence 9999988887777778889999999999999999854 889999999999875 56788999999999999999999999
Q ss_pred HHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccE
Q 010344 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGF 320 (512)
Q Consensus 241 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 320 (512)
..+.+.... ..+++.++++|+++++++.+.+++. ..++++.||+||+++...... ....+++|+|++++++
T Consensus 202 ~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~---~~~~~~~G~p~~~~~~ 272 (414)
T PRK08308 202 HILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICPD---MKSHLDLGNPLPHVSV 272 (414)
T ss_pred HHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecCC---CCCCCccCccCCCeEE
Confidence 998875422 1368899999999999999988876 468999999999987543221 2244689999999999
Q ss_pred EEeCCCCCCCCCCCCcccccccccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceee
Q 010344 321 VILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMN 400 (512)
Q Consensus 321 ~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~ 400 (512)
++.++. ++ .||+++.. +++||+|||+|++++||+++++||.+|+||
T Consensus 273 ~~~~~~------~~--~gel~v~~--------------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik 318 (414)
T PRK08308 273 SAGSDE------NA--PEEIVVKM--------------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVIN 318 (414)
T ss_pred EEecCC------CC--CceEEEEc--------------------------CCceEECCceEEECCCccEEEecccCCeEE
Confidence 987532 34 48987731 235899999999999999999999999999
Q ss_pred ecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEE
Q 010344 401 LGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVK 480 (512)
Q Consensus 401 ~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~ 480 (512)
++|++|+|.+||+++. .+|+|.+++|++.+++..+ +.+.++++..++ .+..++.+++ .++|++|++|..++
T Consensus 319 ~~G~~v~p~eIE~~l~-~~~~v~~a~v~~~~~~~~~-~~~~~~v~~~~~---~~~~~l~~~l----~~~l~~~~~P~~i~ 389 (414)
T PRK08308 319 VSGLNVYPIEVEDVML-RLPGVQEAVVYRGKDPVAG-ERVKAKVISHEE---IDPVQLREWC----IQHLAPYQVPHEIE 389 (414)
T ss_pred ECCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCCC---CCHHHHHHHH----HHhCccccCCcEEE
Confidence 9999999999999998 8999999999999988888 888888887643 5555555544 56788899999999
Q ss_pred EecCCCCCCCchHHHHHHH
Q 010344 481 IVLEFPRTASNKLLRRVLK 499 (512)
Q Consensus 481 ~~~~iP~t~~GKi~r~~l~ 499 (512)
++++||+|++||++|+.|+
T Consensus 390 ~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 390 SVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred EeccCCCCCCcCeehhhhh
Confidence 9999999999999999544
No 109
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.6e-57 Score=471.30 Aligned_cols=470 Identities=16% Similarity=0.125 Sum_probs=343.4
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCH-----HHHHHHHHhcCccEEEeccchh
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAA-----REIATRLRVSKAKGIFTQDFIL 75 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~iv~~~~~~ 75 (512)
.++++|++|++. +++||+|+++++|+++|++++|||+++|++++|++|.++. +++.+++++++++++|+++...
T Consensus 89 ~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 168 (624)
T PRK12582 89 AVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP 168 (624)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH
Confidence 478999999999 9999999999999999999999999999999999999885 8999999999999999986310
Q ss_pred ccCccccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010344 76 RGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~p 155 (512)
...............+.+..... ......+.++...... ...........++++++++|||||||.|
T Consensus 169 -----~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~i~yTSGTTG~P 235 (624)
T PRK12582 169 -----FARALAALDLLDVTVVHVTGPGE------GIASIAFADLAATPPT--AAVAAAIAAITPDTVAKYLFTSGSTGMP 235 (624)
T ss_pred -----HHHHHHhhhhcCceEEEEcCCCc------ccccccHHHHhhcCCc--chhhhhhccCCCCceEEEEEcCCCCCCC
Confidence 00000111111112222211100 0122345665543221 0000111223568899999999999999
Q ss_pred ceEEecCchhHHHHHHhhccccccC---CcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCch---hhHHHHHHhc
Q 010344 156 KAIPWTQLSPIRCAAEAWGHIDMKV---GDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLE---RSFGKFVQDS 228 (512)
Q Consensus 156 K~v~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~---~~~~~~l~~~ 228 (512)
|||++||+++..+............ ++++++++|++|.+++.. ++.++..|+++++.+....+ ..+++.++++
T Consensus 236 KgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~ 315 (624)
T PRK12582 236 KAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREI 315 (624)
T ss_pred ceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhc
Confidence 9999999999887665544444333 579999999999999865 66788999999986544333 3567778999
Q ss_pred CceEEecchHHHHHHHccCCCC----CCCcCceeEEEeecCCCCchhhHHHHHhh----C-CCCeeeecCCccccceecc
Q 010344 229 GVSVLGTVPSLVKAWKNTNCLQ----GLDWTKIRSFASTGETSNVDDDLWLASKA----Y-YKPIIECCGGTELASSYIQ 299 (512)
Q Consensus 229 ~~t~l~~~P~~~~~l~~~~~~~----~~~l~~l~~i~~~G~~l~~~~~~~~~~~~----~-~~~i~~~yG~tE~~~~~~~ 299 (512)
++|+++++|.++..|++..... ..++++||.+++||+++++++.+.+.+.+ + ++++++.||+||++.+...
T Consensus 316 ~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~ 395 (624)
T PRK12582 316 SPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTG 395 (624)
T ss_pred CCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeec
Confidence 9999999999999887543211 23468999999999999999999988753 1 3579999999999876542
Q ss_pred cCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeec
Q 010344 300 GSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHG 378 (512)
Q Consensus 300 ~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TG 378 (512)
.. ......+++|+|++|++++|+ +.|+ .|||++ ++..+.+ |+.+++.+...| +.+|||+||
T Consensus 396 ~~-~~~~~~~svG~p~pg~~v~i~-------~~G~--~GEl~vrg~~v~~G--Y~~~p~~t~~~f------~~dgw~~TG 457 (624)
T PRK12582 396 TH-WDTERVGLIGLPLPGVELKLA-------PVGD--KYEVRVKGPNVTPG--YHKDPELTAAAF------DEEGFYRLG 457 (624)
T ss_pred cc-CCCCCCCCCCcCCCCcEEEEc-------cCCC--ceEEEEECCccccc--ccCCccchhhhc------CccCCcccc
Confidence 22 223456799999999999986 3466 599999 5554433 223444444444 346899999
Q ss_pred ceEEE-e---CCCeEEEEeccCceee-ecceecchHHHH--HhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCC--
Q 010344 379 DIIKR-T---VGGYIIVQGRADDTMN-LGGIKTSSVEIE--RVCDGADESILETAAISVSPAGGGPEVLVICVVLKKG-- 449 (512)
Q Consensus 379 D~~~~-~---~~g~l~i~gR~~d~i~-~~G~~v~~~~iE--~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~-- 449 (512)
|+|++ | ++|+++|+||.||+|+ .+|++|+|.+|| .++. .||.|.+++|++++++ .+.+.|++...
T Consensus 458 Dlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~-~~p~V~~a~VvG~~~~-----~~g~lv~p~~~~~ 531 (624)
T PRK12582 458 DAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAA-CSPVIHDAVVAGQDRA-----FIGLLAWPNPAAC 531 (624)
T ss_pred ceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHh-cCcchheEEEEcCCCC-----cEEEEEecCHHHH
Confidence 99998 4 4699999999999999 589999999885 6776 8999999999998774 44455543221
Q ss_pred --------CC---CCcHHHHHHHHHHHHH---hccCCcc-ceeeEEEecCCC------CCCCchHHHHHHHHHHHhhhhc
Q 010344 450 --------FT---SQPVDKLKMIFSKAIQ---RNLNPLF-KVSLVKIVLEFP------RTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 450 --------~~---~~~~~~l~~~~~~~~~---~~l~~~~-~p~~i~~~~~iP------~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
.. ..+.+++.+++++.+. +.++.+. +|+.+.+++++| +|++||+.|+.+.+.|+++|++
T Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ 611 (624)
T PRK12582 532 RQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVER 611 (624)
T ss_pred HHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHH
Confidence 00 0234567777766653 3566666 999999999877 5677899999999999999876
No 110
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.9e-56 Score=449.58 Aligned_cols=427 Identities=20% Similarity=0.198 Sum_probs=341.6
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|+.|.+. +++||+|+++++|+++++++++||+++|++++|+++.++.+++..++++++++++++++....
T Consensus 8 ~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---- 83 (436)
T TIGR01923 8 EAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSLLEE---- 83 (436)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCcccc----
Confidence 478999999999 999999999999999999999999999999999999999999999999999999999874210
Q ss_pred ccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPW 160 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 160 (512)
.. .. ...+.++...... ..........+++++++|||||||.||+|++
T Consensus 84 -----~~-------~~----------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~ 131 (436)
T TIGR01923 84 -----KD-------FQ----------------ADSLDRIEAAGRY----ETSLSASFNMDQIATLMFTSGTTGKPKAVPH 131 (436)
T ss_pred -----cc-------ee----------------ecchHhhhhcccc----cccccccCCcCceEEEEeCCCCCCCCcEEEE
Confidence 00 00 0011111111110 0011223456789999999999999999999
Q ss_pred cCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHH
Q 010344 161 TQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240 (512)
Q Consensus 161 s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~ 240 (512)
+|.++...+......+++.++|++++..|++|..++..++.++..|+++++.+.. ..+++.++++++|++.++|+++
T Consensus 132 s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~~~P~~l 208 (436)
T TIGR01923 132 TFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHISLVPTQL 208 (436)
T ss_pred ehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEEeHHHHH
Confidence 9999999888888888999999999999999999988889999999999997543 4899999999999999999999
Q ss_pred HHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccE
Q 010344 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGF 320 (512)
Q Consensus 241 ~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~ 320 (512)
..|++.... .+++|.++++|+++++++.+++.. . +.++++.||+||++...+...........++|.|++++++
T Consensus 209 ~~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 282 (436)
T TIGR01923 209 NRLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQ-Y-GLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREI 282 (436)
T ss_pred HHHHhCcCC----CCceEEEEECCCCCCHHHHHHHHH-h-CCceeeEecCCccchhccCcCccccccccCCCccCCCcEE
Confidence 999876432 168999999999999999888765 3 7889999999999876554433222222348999999999
Q ss_pred EEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCcee
Q 010344 321 VILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTM 399 (512)
Q Consensus 321 ~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i 399 (512)
++.+++. ++ .|||++ ++....+|. .+++.+... ..++||+|||++++++||++++.||.+|++
T Consensus 283 ~i~~~~~-----~~--~Gel~v~~~~~~~gy~--~~~~~~~~~-------~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i 346 (436)
T TIGR01923 283 KIKVDNK-----EG--HGEIMVKGANLMKGYL--YQGELTPAF-------EQQGWFNTGDIGELDGEGFLYVLGRRDDLI 346 (436)
T ss_pred EEEeCCC-----CC--ceEEEEECCccchhhC--CChhhhhhh-------hcCCCeeccceEEEcCCCCEEEeccccCeE
Confidence 9944322 13 599999 444433221 122221111 235799999999999999999999999999
Q ss_pred eecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeE
Q 010344 400 NLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLV 479 (512)
Q Consensus 400 ~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i 479 (512)
|++|.+|+|.+||++|. .++.|.++++++.++...+ ..+.+++++.++ .+..++.+++ .+.|++|++|..|
T Consensus 347 ~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~---~~~~~l~~~l----~~~l~~~~~p~~i 417 (436)
T TIGR01923 347 ISGGENIYPEEIETVLY-QHPGIQEAVVVPKPDAEWG-QVPVAYIVSESD---ISQAKLIAYL----TEKLAKYKVPIAF 417 (436)
T ss_pred EeCCEeeCHHHHHHHHH-hCCCeeEEEEeCCcchhcC-CeeEEEEEECCC---CCHHHHHHHH----HHhhhCCCCCeEE
Confidence 99999999999999998 8999999999998877666 788888888754 4555555555 4677889999999
Q ss_pred EEecCCCCCCCchHHHHHH
Q 010344 480 KIVLEFPRTASNKLLRRVL 498 (512)
Q Consensus 480 ~~~~~iP~t~~GKi~r~~l 498 (512)
+++++||+|++||++|++|
T Consensus 418 ~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 418 EKLDELPYNASGKILRNQL 436 (436)
T ss_pred EEecCCCCCCCCceecccC
Confidence 9999999999999999864
No 111
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-56 Score=463.29 Aligned_cols=456 Identities=18% Similarity=0.183 Sum_probs=349.2
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcC-------HHHHHHHHHhcCccEEEeccc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFA-------AREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~iv~~~~ 73 (512)
.++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++..+ .+++.++++.++++++++++.
T Consensus 58 ~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~ 137 (579)
T PRK09192 58 RAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDE 137 (579)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChH
Confidence 368899999999 999999999999999999999999999999999987543 589999999999999999874
Q ss_pred hhccCccccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010344 74 ILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTG 153 (512)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 153 (512)
.. +.+........ ... ..++.++...... ........++++++++|||||||
T Consensus 138 ~~------~~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG 189 (579)
T PRK09192 138 LL------PWVNEATHGNP-LLH----------------VLSHAWFKALPEA-----DVALPRPTPDDIAYLQYSSGSTR 189 (579)
T ss_pred HH------HHHHHhhcccc-ccc----------------eeehhhhcccCCC-----ccccCCCCCCCeEEEEecCCCCC
Confidence 32 11121111110 001 1123333322111 11112345688999999999999
Q ss_pred CCceEEecCchhHHHHHHhhc-cccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCC---CchhhHHHHHHhc
Q 010344 154 EPKAIPWTQLSPIRCAAEAWG-HIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGS---PLERSFGKFVQDS 228 (512)
Q Consensus 154 ~pK~v~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~ 228 (512)
.||+|+++|+++..++..... .+++.++|+++.+.|++|.+++.. ++.++..|+++++.+.. ..+..+++.++++
T Consensus 190 ~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~ 269 (579)
T PRK09192 190 FPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRN 269 (579)
T ss_pred CCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhc
Confidence 999999999999988877776 788899999999999999999875 66778889988775421 2467899999999
Q ss_pred CceEEecchHHHHHHHccC---CCCCCCcCceeEEEeecCCCCchhhHHHHHhhCC-----CCeeeecCCccccceeccc
Q 010344 229 GVSVLGTVPSLVKAWKNTN---CLQGLDWTKIRSFASTGETSNVDDDLWLASKAYY-----KPIIECCGGTELASSYIQG 300 (512)
Q Consensus 229 ~~t~l~~~P~~~~~l~~~~---~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~-----~~i~~~yG~tE~~~~~~~~ 300 (512)
++|.++..|..+..+.... .....+++++|.+++||+++++.+.+.+.+.+.. ..+++.||+||++...+..
T Consensus 270 ~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~ 349 (579)
T PRK09192 270 RGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFS 349 (579)
T ss_pred CcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEecc
Confidence 9998877666555443221 1233578899999999999999999988877631 3489999999997655432
Q ss_pred CCCCC---------------------------CcccccccccCCccEEEeCCCCCCCCCCCCccccccc-cccccccccc
Q 010344 301 SMLQP---------------------------QAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDR 352 (512)
Q Consensus 301 ~~~~~---------------------------~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~ 352 (512)
..... ...+++|.|.++++++|+|+++++++.|+ .|||++ ++..+.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~~~~~~~~g~--~Gel~i~g~~~~~g--- 424 (579)
T PRK09192 350 PLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRNEAGMPLPERV--VGHICVRGPSLMSG--- 424 (579)
T ss_pred CCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEECCCCCCCCCCC--EEEEEecCCchhhh---
Confidence 22100 11357899999999999999999999998 799999 5444432
Q ss_pred ccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCccee--eeeEEee
Q 010344 353 LLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESIL--ETAAISV 430 (512)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~--~~~v~~~ 430 (512)
|.+...+...+ ..++||+|||+|++ ++|+++++||.+|+|+++|++|+|.+||++|. .||+|. +++|+++
T Consensus 425 Y~~~~~~~~~~------~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~-~~p~V~~~~~~v~~~ 496 (579)
T PRK09192 425 YFRDEESQDVL------AADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAE-QEPELRSGDAAAFSI 496 (579)
T ss_pred hcCCccccccc------cCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHH-hcCCccCCcEEEEEe
Confidence 22223322222 34579999999999 99999999999999999999999999999998 899998 8999998
Q ss_pred CCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEEEec--CCCCCCCchHHHHHHHHHHHh
Q 010344 431 SPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVL--EFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 431 ~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~--~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+++. + +.++++++..++.. .+.+++.+++++.+.. .++.|..++++. +||+|++||++|++|++++..
T Consensus 497 ~~~~-~-~~~~~~v~~~~~~~-~~~~~l~~~~~~~l~~---~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~ 566 (579)
T PRK09192 497 AQEN-G-EKIVLLVQCRISDE-ERRGQLIHALAALVRS---EFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLS 566 (579)
T ss_pred ccCC-C-eeEEEEEEecCCCh-HHHHHHHHHHHHHHHH---HhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHc
Confidence 8864 5 57888888765443 4566777777766533 356777777775 899999999999999999875
No 112
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-55 Score=454.33 Aligned_cols=476 Identities=20% Similarity=0.197 Sum_probs=351.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++..++++++++.++++....
T Consensus 52 ~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~----- 126 (545)
T PRK08162 52 RCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFA----- 126 (545)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchh-----
Confidence 478999999999 99999999999999999999999999999999999999999999999999999999997532
Q ss_pred ccchhhHHhcCCC-ceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 81 FPLYSKVAEAGPL-KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
..+.......+. ...++.............+..++..++..... ..........+++++++|||||||.||+|+
T Consensus 127 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~ 201 (545)
T PRK08162 127 -EVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP----DFAWTLPADEWDAIALNYTSGTTGNPKGVV 201 (545)
T ss_pred -hHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCc----cccccCCCCCCCeEEEEeCCCCCCCCcEEE
Confidence 222222222222 13333321111000001123356666543221 011112234457899999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHH
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
++|+++..+.......+.+..++++++..|++|..++...+...+.|++.++.. ..++..+++.++++++|++.++|++
T Consensus 202 ~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~ 280 (545)
T PRK08162 202 YHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAGTNVCLR-KVDPKLIFDLIREHGVTHYCGAPIV 280 (545)
T ss_pred EecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHHccEEEEeC-CCCHHHHHHHHHHcCCeEEEechHH
Confidence 999988766655555567788899999999999988866444444555555544 5678999999999999999999999
Q ss_pred HHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCC----------CCccc
Q 010344 240 VKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ----------PQAFG 309 (512)
Q Consensus 240 ~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~----------~~~~~ 309 (512)
+..|++........+.+.+.++++|+.+++.+.+.+++ + +.++++.||+||++..+..+.... ....+
T Consensus 281 ~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (545)
T PRK08162 281 LSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEE-I-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKA 358 (545)
T ss_pred HHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHH-h-CCceeecccccccCcceeecccccccccCCccchhhccC
Confidence 99998765443344556677789999999998888765 4 788999999999865433321110 01124
Q ss_pred ccccccC-CccEEEeC-CCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCC
Q 010344 310 AFSTATM-TTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVG 386 (512)
Q Consensus 310 ~~G~p~~-~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 386 (512)
+.|.+.+ +..++|+| +++.+++.+....|||++ ++..+.+ ++.+++.+...| .++||+|||+|++|++
T Consensus 359 ~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~g--Y~~~~~~~~~~~-------~~g~~~TGDl~~~d~d 429 (545)
T PRK08162 359 RQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKG--YLKNPKATEEAF-------AGGWFHTGDLAVLHPD 429 (545)
T ss_pred CCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhh--hcCChhhhHHHh-------hCCCcccCceEEEcCC
Confidence 5566654 34578888 467888763212599999 4443332 222333333333 2469999999999999
Q ss_pred CeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHH
Q 010344 387 GYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAI 466 (512)
Q Consensus 387 g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~ 466 (512)
|+++++||.+|+++.+|++|+|.+||+.|. .+|+|.+++|++.+++..+ +.+.+++++.++.. .+.+++.+ ++
T Consensus 430 g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~----~~ 502 (545)
T PRK08162 430 GYIKIKDRSKDIIISGGENISSIEVEDVLY-RHPAVLVAAVVAKPDPKWG-EVPCAFVELKDGAS-ATEEEIIA----HC 502 (545)
T ss_pred ccEEEEecccceEEeCCEEECHHHHHHHHH-hCCcccEEEEEeeeccccC-ceEEEEEEeCCCCC-CCHHHHHH----HH
Confidence 999999999999999999999999999998 8999999999999887777 78999999887654 45555544 44
Q ss_pred HhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhh
Q 010344 467 QRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELS 507 (512)
Q Consensus 467 ~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 507 (512)
++.|++|++|..+++ ++||+|++||++|+.|++++.+...
T Consensus 503 ~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l~~ 542 (545)
T PRK08162 503 REHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSLKA 542 (545)
T ss_pred HHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhhhh
Confidence 567889999998875 6799999999999999998775443
No 113
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-55 Score=411.36 Aligned_cols=485 Identities=16% Similarity=0.155 Sum_probs=369.9
Q ss_pred HHHHHHHHhcc-CCCCCE-EEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 3 YRLVANALDTM-FSKGDA-IAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~-V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
+..+|++|... ++++++ ++|+++.+.+|+++++||++.+...|.+..++.++.+.+-|++++++.|+|+.+..
T Consensus 99 ~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL----- 173 (678)
T KOG1180|consen 99 VHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELL----- 173 (678)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHH-----
Confidence 67899999999 997666 99999999999999999999999999999999999999999999999999999543
Q ss_pred ccchhhHHhcCCCceEEeeccC---Ccc--ccc----ccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVIG---DDV--GIQ----LRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGT 151 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 151 (512)
+.+.......+....++..+. ... +.. ..-...++++++..+.... .++.+..++|+|+|+|||||
T Consensus 174 -~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~----~~~~~P~p~Dia~IMYTSGS 248 (678)
T KOG1180|consen 174 -PKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE----IPPHPPKPSDIACIMYTSGS 248 (678)
T ss_pred -HHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC----CCCCCCCCCceEEEEEcCCC
Confidence 444444444443333333221 111 111 1234578999999888732 22333377999999999999
Q ss_pred CCCCceEEecCchhHHHHHHhhccc-cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhh---H----HH
Q 010344 152 TGEPKAIPWTQLSPIRCAAEAWGHI-DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERS---F----GK 223 (512)
Q Consensus 152 TG~pK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~---~----~~ 223 (512)
||.|||||++|.|+++.+....... .+.+.|+++..+|+.|.+.+..-+.+++.|+.+-..+.....+. + -.
T Consensus 249 TG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kG 328 (678)
T KOG1180|consen 249 TGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKG 328 (678)
T ss_pred CCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcC
Confidence 9999999999999999988777654 67899999999999999999888899999999988764332111 1 12
Q ss_pred HHHhcCceEEecchHHHHHHHcc--------------------------CCCCC----------------CCcCceeEEE
Q 010344 224 FVQDSGVSVLGTVPSLVKAWKNT--------------------------NCLQG----------------LDWTKIRSFA 261 (512)
Q Consensus 224 ~l~~~~~t~l~~~P~~~~~l~~~--------------------------~~~~~----------------~~l~~l~~i~ 261 (512)
.+..++||.+.++|..+.++.+. .+... .-...||+++
T Consensus 329 D~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~L 408 (678)
T KOG1180|consen 329 DLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYIL 408 (678)
T ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEE
Confidence 46789999999999988876433 00000 1124799999
Q ss_pred eecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeC-CCCCCCCCCCCccccc
Q 010344 262 STGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEV 340 (512)
Q Consensus 262 ~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel 340 (512)
+||++++++.++.+--.+ .+++.++||.||++...+..... +...+.+|.|++.++++++| ++|.=.+.+.|..|||
T Consensus 409 sGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~e~~-d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI 486 (678)
T KOG1180|consen 409 SGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVLEPE-DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEI 486 (678)
T ss_pred eCCCCCCHHHHHHHHHhc-cccccccccccchhcccEecChh-hcccccccCCccceEEEEEEhhhcCccCCCCCCCceE
Confidence 999999999999887766 67999999999998866654443 34457999999999999999 5544333333335999
Q ss_pred cc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceee-ecceecchHHHHHhhhcC
Q 010344 341 GL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDGA 418 (512)
Q Consensus 341 ~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~-~~G~~v~~~~iE~~l~~~ 418 (512)
+| ++++-.+ ||.+++.+..-|.. .+|.+||+|||+|++.+||.|.|.+|++|++| .+|+.|+++-+|+++. .
T Consensus 487 ~i~G~~vt~g--Y~kn~ekT~e~ft~---~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~-s 560 (678)
T KOG1180|consen 487 LIGGPNVTMG--YYKNEEKTKEDFTV---EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALR-S 560 (678)
T ss_pred EecCCccChh--hhCChhhhhhhcee---cCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHh-c
Confidence 99 5554443 34566666666643 46778999999999999999999999999999 5999999999999998 9
Q ss_pred CcceeeeeEEeeCCCCCCCceEEEEEEecCCCCC-------C---cH----------HHHHHHHHHHH-HhccCCcccee
Q 010344 419 DESILETAAISVSPAGGGPEVLVICVVLKKGFTS-------Q---PV----------DKLKMIFSKAI-QRNLNPLFKVS 477 (512)
Q Consensus 419 ~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~-------~---~~----------~~l~~~~~~~~-~~~l~~~~~p~ 477 (512)
.|.|...+|++.... ..++++||++.+.-. . +. .++.+.+.+.- ..+|..+.+|.
T Consensus 561 ~p~V~NICvyAd~~~----s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~ 636 (678)
T KOG1180|consen 561 SPYVDNICVYADSNK----SKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPA 636 (678)
T ss_pred CcchhheEEeccccc----ceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccc
Confidence 999999999876553 689999999754210 1 11 11222222222 46888999999
Q ss_pred eEEEecCC--C----CCCCchHHHHHHHHHHHhhhhcc
Q 010344 478 LVKIVLEF--P----RTASNKLLRRVLKDQLKHELSVR 509 (512)
Q Consensus 478 ~i~~~~~i--P----~t~~GKi~r~~l~~~~~~~~~~~ 509 (512)
.|++.++. | .|+.-|+.|+.+++.|++++++-
T Consensus 637 ~I~l~~e~WTPenGlvT~A~KLKRk~I~~~~k~ei~~~ 674 (678)
T KOG1180|consen 637 KIVLSPEPWTPENGLVTAALKLKRKEILAAYKKEIDRL 674 (678)
T ss_pred eeEecCCCcCCCccccHHHHHhhHHHHHHHHHHHHHHH
Confidence 99998761 2 34556999999999999998864
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-54 Score=443.88 Aligned_cols=455 Identities=17% Similarity=0.137 Sum_probs=338.8
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHH-------HHHHHhcCccEEEeccc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREI-------ATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l-------~~~l~~~~~~~iv~~~~ 73 (512)
.++++|++|.+. +++||+|+++++|+++++++++||+++|++++++++..+.+++ ..+++.++++.+++++.
T Consensus 38 ~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 117 (545)
T PRK07768 38 RARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEP 117 (545)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecch
Confidence 378999999999 9999999999999999999999999999999999988776544 55677789999999874
Q ss_pred hhccCccccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010344 74 ILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTG 153 (512)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG 153 (512)
... ....+ .... .....++++...... ......++++++++|||||||
T Consensus 118 ~~~------~~~~~-~~~~------------------~~~~~~~~l~~~~~~-------~~~~~~~~~~a~i~~TSGtTG 165 (545)
T PRK07768 118 FLA------AAPVL-EEKG------------------IRVLTVADLLAADPI-------DPVETGEDDLALMQLTSGSTG 165 (545)
T ss_pred hhh------hhhhh-cccC------------------CceeehhhhcccCCC-------CcCCCCCCCEEEEEeCCCCCC
Confidence 321 11100 0000 112234454432111 122345788999999999999
Q ss_pred CCceEEecCchhHHHHHHhhccccccCC-cEEEecCCccchhhhHH-HHhhhccCceEEEecCC---CchhhHHHHHHhc
Q 010344 154 EPKAIPWTQLSPIRCAAEAWGHIDMKVG-DVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGS---PLERSFGKFVQDS 228 (512)
Q Consensus 154 ~pK~v~~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~ 228 (512)
.||+|+++|+++...+......+++..+ |++++.+|++|..++.. ++.++..|+++++++.. .++..+++.++++
T Consensus 166 ~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~ 245 (545)
T PRK07768 166 SPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKY 245 (545)
T ss_pred CCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHh
Confidence 9999999999999888777777777776 89999999999999875 66789999999887542 2467788999999
Q ss_pred CceEEecchHHHHHHHccC----CCCCCCcCceeEEEeecCCCCchhhHHHHHh---hC--CCCeeeecCCccccceecc
Q 010344 229 GVSVLGTVPSLVKAWKNTN----CLQGLDWTKIRSFASTGETSNVDDDLWLASK---AY--YKPIIECCGGTELASSYIQ 299 (512)
Q Consensus 229 ~~t~l~~~P~~~~~l~~~~----~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~---~~--~~~i~~~yG~tE~~~~~~~ 299 (512)
++|++..+|..+..+.... .....+++++|.++++|+++++.+.+.+.+. +. ...+++.||+||++..+..
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~ 325 (545)
T PRK07768 246 RGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSF 325 (545)
T ss_pred CCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEc
Confidence 9999988888776655422 1224678899999999999999998888764 31 1249999999999875443
Q ss_pred cCCCC-------------------------CCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccc
Q 010344 300 GSMLQ-------------------------PQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRL 353 (512)
Q Consensus 300 ~~~~~-------------------------~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~ 353 (512)
..... ....+++|.|+++++++|+|+++++++.|+ .|||++ ++....+|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~g~--~Gel~v~~~~~~~gy--- 400 (545)
T PRK07768 326 SPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVDEDGQVLPPRG--VGVIELRGESVTPGY--- 400 (545)
T ss_pred cCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEECCCCCCCCCCC--EEEEEEccCcccccc---
Confidence 22110 113468999999999999999999999998 699999 43333322
Q ss_pred cccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCC-
Q 010344 354 LNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSP- 432 (512)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~- 432 (512)
.+...... ....++||+|||+++++++|+++++||.+|+|+.+|++|+|.+||+.|. .+|+|.+++|+++..
T Consensus 401 ~~~~~~~~------~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~ 473 (545)
T PRK07768 401 LTMDGFIP------AQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAA-RVEGVRPGNAVAVRLD 473 (545)
T ss_pred cCCCCCcc------cccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHH-hCcccccceEEEEEec
Confidence 22221111 1234579999999999999999999999999999999999999999998 899999988776543
Q ss_pred -CCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEEEec--CCCCCCCchHHHHHHHHHHH
Q 010344 433 -AGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVL--EFPRTASNKLLRRVLKDQLK 503 (512)
Q Consensus 433 -~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~--~iP~t~~GKi~r~~l~~~~~ 503 (512)
...+ +...++++..+........++.+.+++.+.+.+. ..|..+.+++ +||+|++||++|+.|+++|.
T Consensus 474 ~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~--~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 474 AGHSR-EGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVG--VRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CCCCc-eEEEEEEEecccccHHHHHHHHHHHHHHHHHHhC--CCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 3333 4555555443322111223455555555444332 4677788886 89999999999999999875
No 115
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-54 Score=445.86 Aligned_cols=465 Identities=18% Similarity=0.170 Sum_probs=330.7
Q ss_pred cHHHHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCC---CcCHHHHHHHHHhcCccEEEeccchhccC
Q 010344 2 SYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIAD---SFAAREIATRLRVSKAKGIFTQDFILRGG 78 (512)
Q Consensus 2 ~~~~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~iv~~~~~~~~~ 78 (512)
.++++|++|++.-.+||+|+++++|++++++++|||+++|++++|+++ .++.+++.+++++++++++++++...
T Consensus 44 ~v~~~A~~L~~~g~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~--- 120 (578)
T PRK05850 44 RTLNVAEELRRHGSTGDRAVILAPQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVV--- 120 (578)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHH---
Confidence 367899999988347999999999999999999999999999999997 45788999999999999999987532
Q ss_pred ccccchhhHHhcCC--CceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCc
Q 010344 79 RKFPLYSKVAEAGP--LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPK 156 (512)
Q Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 156 (512)
+.+........ ....++... .. ++. .. .........++++++++|||||||.||
T Consensus 121 ---~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~---~~----~~~~~~~~~~~d~a~i~~TSGTTG~PK 176 (578)
T PRK05850 121 ---DDVTEYVAPQPGQSAPPVIEVD-----------LL---DLD---SP----RGSDARPRDLPSTAYLQYTSGSTRTPA 176 (578)
T ss_pred ---HHHHHHHhhcccccccceEeec-----------cc---ccc---cC----CccccCCCCCCCeEEEEeCCCCCCCCc
Confidence 11111111110 000011000 00 000 00 000112235688999999999999999
Q ss_pred eEEecCchhHHHHHHhhcc-cc-----ccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCC---CchhhHHHHHH
Q 010344 157 AIPWTQLSPIRCAAEAWGH-ID-----MKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGS---PLERSFGKFVQ 226 (512)
Q Consensus 157 ~v~~s~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~l~ 226 (512)
+|+++|+++.+++...... +. ...++++++.+|++|..++.. ++.+++.|+++++.+.. .++..+++.++
T Consensus 177 gV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~ 256 (578)
T PRK05850 177 GVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLA 256 (578)
T ss_pred eEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHH
Confidence 9999999998876554332 22 356789999999999999865 88999999999997642 25788999999
Q ss_pred hcCceEEecchHHHH-HHHccC---CCCCCCcCceeEEEeecCCCCchhhHHHHHhhC-----CCCeeeecCCcccccee
Q 010344 227 DSGVSVLGTVPSLVK-AWKNTN---CLQGLDWTKIRSFASTGETSNVDDDLWLASKAY-----YKPIIECCGGTELASSY 297 (512)
Q Consensus 227 ~~~~t~l~~~P~~~~-~l~~~~---~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-----~~~i~~~yG~tE~~~~~ 297 (512)
+++++.+ .+|.++. .+.... .....+++++|.+++||+++++++.+++.+.+. +..+.+.||+||++...
T Consensus 257 ~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 335 (578)
T PRK05850 257 SNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYV 335 (578)
T ss_pred HcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhhe
Confidence 9999865 5555543 333221 122456789999999999999999999888763 24689999999987543
Q ss_pred cccCCCCC------------------------CcccccccccCCccEEEeC-CCCCCCCCCCCccccccc-ccccccccc
Q 010344 298 IQGSMLQP------------------------QAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGL-FPLYLGATD 351 (512)
Q Consensus 298 ~~~~~~~~------------------------~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v-~~~~~~~~~ 351 (512)
........ .....+|.|. +.+++|+| +++.+++.|+ .|||++ ++..+.+|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~--~Gel~v~g~~~~~gY- 411 (578)
T PRK05850 336 ATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGT--VGEIWVHGDNVAAGY- 411 (578)
T ss_pred eccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCC--EEEEEEecCcccccc-
Confidence 32211100 0011344443 57899999 4578899998 699999 55554432
Q ss_pred cccccCcceeEEec---CC--cccCceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeee
Q 010344 352 RLLNADHEEVYFSG---MP--IYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETA 426 (512)
Q Consensus 352 ~~~~~~~~~~~~~~---~~--~~~~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~ 426 (512)
+.+++.+...|.. ++ ....++||+|||+|+++ +|+++++||.+|+||++|++|+|.+||++|. +||.+ +++
T Consensus 412 -~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~-~~~~~-~~~ 487 (578)
T PRK05850 412 -WQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQ-EITGG-RVA 487 (578)
T ss_pred -cCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCeecCHHHHHHHHH-HhcCC-cEE
Confidence 3345555444421 11 01134799999999997 9999999999999999999999999999998 89985 578
Q ss_pred EEeeCCCCCCCceEEEEEEecCCCCCCcHHH--HHHHHHHHHHhccCCc--cceeeEEEe--cCCCCCCCchHHHHHHHH
Q 010344 427 AISVSPAGGGPEVLVICVVLKKGFTSQPVDK--LKMIFSKAIQRNLNPL--FKVSLVKIV--LEFPRTASNKLLRRVLKD 500 (512)
Q Consensus 427 v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~--l~~~~~~~~~~~l~~~--~~p~~i~~~--~~iP~t~~GKi~r~~l~~ 500 (512)
+++++++ .+ +.++++|++++... .+.++ ....+++++.+.+..+ ..|..+.++ ++||+|++||++|++|++
T Consensus 488 v~~v~~~-~~-~~~~a~v~~~~~~~-~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~ 564 (578)
T PRK05850 488 AISVPDD-GT-EKLVAIIELKKRGD-SDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVE 564 (578)
T ss_pred EEEecCC-Cc-eEEEEEEEeccccC-cchhhhhhHHHHHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHH
Confidence 8888876 55 78999999887643 33222 3345555544434321 245666666 489999999999999999
Q ss_pred HHHhh
Q 010344 501 QLKHE 505 (512)
Q Consensus 501 ~~~~~ 505 (512)
++.+.
T Consensus 565 ~~~~~ 569 (578)
T PRK05850 565 QYRQD 569 (578)
T ss_pred HHHcC
Confidence 98753
No 116
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=6.5e-51 Score=405.93 Aligned_cols=390 Identities=19% Similarity=0.179 Sum_probs=314.6
Q ss_pred cHHHHHHHHhc-c-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCc
Q 010344 2 SYRLVANALDT-M-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 79 (512)
Q Consensus 2 ~~~~~a~~L~~-~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~ 79 (512)
.++++|++|.+ . +++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++++.......
T Consensus 8 ~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~ 87 (408)
T TIGR01733 8 RANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRLA 87 (408)
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhcc
Confidence 47899999998 7 999999999999999999999999999999999999999999999999999999999975321111
Q ss_pred cccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEE
Q 010344 80 KFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIP 159 (512)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~ 159 (512)
. . ......+.. .+......... ..........+++++++|||||||.||+|.
T Consensus 88 ~---------~-~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~ 139 (408)
T TIGR01733 88 G---------L-VLPIILVDP--------------LELAALDDAPA----PPPPDAPSGPDDLAYVIYTSGSTGRPKGVV 139 (408)
T ss_pred c---------c-CCceEEech--------------hhhhhcccccc----cccccCCCCCCCcEEEEEcCCCCCCCCEEE
Confidence 1 0 101111110 01111110000 001111135688999999999999999999
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCc--hhhHHHHHHhcCceEEecch
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPL--ERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~--~~~~~~~l~~~~~t~l~~~P 237 (512)
+||+++..........+.+.++|++++..|++|.+++..++.++..|+++++.+.... +..+.+.++++++|.+.++|
T Consensus 140 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p 219 (408)
T TIGR01733 140 VTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTP 219 (408)
T ss_pred eccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCH
Confidence 9999999988888888888899999999999999999889999999999999876554 67889999999999999999
Q ss_pred HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCC----ccccccc
Q 010344 238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQ----AFGAFST 313 (512)
Q Consensus 238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~----~~~~~G~ 313 (512)
.+++.|++... ..++++|.++++|+++++++.+.+.+.+++..+++.||+||++.++......... ...++|.
T Consensus 220 ~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~ 296 (408)
T TIGR01733 220 SLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGR 296 (408)
T ss_pred HHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCc
Confidence 99999988653 5678999999999999999999999998668899999999999866422221111 2678999
Q ss_pred ccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCce--eeeecceEEEeCCCeEE
Q 010344 314 ATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMH--LRRHGDIIKRTVGGYII 390 (512)
Q Consensus 314 p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~TGD~~~~~~~g~l~ 390 (512)
|+++++++|+|+++++++.|+ .|||++ ++..+.+| +.+++.+...|...+....++ ||+|||+|++|++|+++
T Consensus 297 ~~~~~~~~i~~~~~~~~~~g~--~Gel~v~~~~~~~gy--~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~ 372 (408)
T TIGR01733 297 PLANTRLYVLDDDLRPVPVGV--VGELYIGGPGVARGY--LNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLE 372 (408)
T ss_pred ccCCceEEEECCCCCCCCCCC--ceEEEecCccccccc--cCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEE
Confidence 999999999999899999998 699999 54444432 334555555555544444444 99999999999999999
Q ss_pred EEeccCceeeecceecchHHHHHhhhcCCcceeeeeE
Q 010344 391 VQGRADDTMNLGGIKTSSVEIERVCDGADESILETAA 427 (512)
Q Consensus 391 i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v 427 (512)
+.||.+|+++.+|++++|.+||+++. .++.|.+++|
T Consensus 373 ~~gR~~~~i~~~G~~v~~~~ie~~l~-~~~~v~~~~v 408 (408)
T TIGR01733 373 FLGRIDDQVKIRGYRIELGEIEAALL-RHPGVREAVV 408 (408)
T ss_pred EeeccCCEEEeCeEEechHHHHHHHh-cCcchhhhcC
Confidence 99999999999999999999999998 8999998864
No 117
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=6.4e-51 Score=382.12 Aligned_cols=468 Identities=21% Similarity=0.195 Sum_probs=358.9
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
++++|+.|..+ ++.||.|+++|+|.+|++.++|+++++|++...||+++..+.|.|.+..++++++|++.+..
T Consensus 114 s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~------ 187 (649)
T KOG1179|consen 114 SNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELL------ 187 (649)
T ss_pred HHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHH------
Confidence 57899999999 99999999999999999999999999999999999999999999999999999999998643
Q ss_pred cchhhHHhcCCC----ceEEeeccCCcccccccccCccHHHHhhccCCCCCCC-C-CCCCCCCCCCeEEEEecCCCCCCC
Q 010344 82 PLYSKVAEAGPL----KAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPK-Y-YPPVYRPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 82 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~~TSGtTG~p 155 (512)
..+.+..+. .+.++..... ......+++....+..+..+ + .........++++.+|||||||.|
T Consensus 188 ---~~~~e~~~~l~~~~i~~~~~~~~-------~~~~g~~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLP 257 (649)
T KOG1179|consen 188 ---NALEEILPLLIKNGIHVFSLGPT-------SVPDGIESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLP 257 (649)
T ss_pred ---HHHHhcchhhhhccceEEecCCC-------CCCchHHHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCC
Confidence 222222111 1122211111 12223445555555422222 1 223334566899999999999999
Q ss_pred ceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 156 KAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 156 K~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
|..+++|..+..-.......++++++|+++..+|++|+.+... +.+++..|+|+++-. .+++..||+.+.+|++|++.
T Consensus 258 KaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~Vlrk-KFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 258 KAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRK-KFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEec-ccchhhhHHHHHHhCCeeee
Confidence 9999999998777666677889999999999999999998866 999999999999955 78889999999999999999
Q ss_pred cchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCccccccc-
Q 010344 235 TVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFST- 313 (512)
Q Consensus 235 ~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~- 313 (512)
-..-+.+.|+..+......-..+|..+-.| +.+++.+.|.++|...+|.+.||+||.....+. . +.+.|.+|+
T Consensus 337 YIGElcRYLl~~p~~~~er~HkVRla~GNG--LR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N-~---d~~vGA~G~~ 410 (649)
T KOG1179|consen 337 YIGELCRYLLNQPPSPEERQHKVRLAYGNG--LRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVN-Y---DGRVGACGFM 410 (649)
T ss_pred hHHHHHHHHHcCCCChhhcCceEEEEecCC--CCchHHHHHHHHcCCCeEEEEeccccCcceeee-e---cCccccccch
Confidence 999999999998877666667888887777 558999999999966679999999998764433 2 233344442
Q ss_pred --------ccC------CccEEEeCCCCC--CCCCCCCccccccc---ccccccccccccc-cCcceeEEecCCcccCce
Q 010344 314 --------ATM------TTGFVILDELGV--PYPDDQPCVGEVGL---FPLYLGATDRLLN-ADHEEVYFSGMPIYKGMH 373 (512)
Q Consensus 314 --------p~~------~~~~~i~d~~~~--~~~~g~~~~Gel~v---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 373 (512)
|.. ...=-|.|++|- +|++||+ |.++- .........+|.+ ...+++-...|-+..|+-
T Consensus 411 ~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEp--GlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~ 488 (649)
T KOG1179|consen 411 SRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEP--GLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDV 488 (649)
T ss_pred hhhhhhccceEEEEecCCCCceeecCCceEEECCCCCC--ceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcE
Confidence 111 111112334442 6788884 85543 1222222445656 445555555577789999
Q ss_pred eeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCC
Q 010344 374 LRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQ 453 (512)
Q Consensus 374 ~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~ 453 (512)
||.|||+-.+|+.|++||.+|..|.++.+|+||+..|||.+|. ....+.|+.|+++.-+......=.|.|+.++... .
T Consensus 489 ~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~-~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~-~ 566 (649)
T KOG1179|consen 489 YFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLS-ALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTE-K 566 (649)
T ss_pred EEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHh-hhccccceeEEEEecCCccCccceEEEEecCccc-c
Confidence 9999999999999999999999999999999999999999998 8999999999998665443134456666665544 4
Q ss_pred cHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHH
Q 010344 454 PVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQ 501 (512)
Q Consensus 454 ~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~ 501 (512)
+.+ .+-+++++.|++|.+|..+.+.++|++|.+=|..+..|.+.
T Consensus 567 d~~----~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 567 DLE----KLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKE 610 (649)
T ss_pred hHH----HHHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHc
Confidence 544 44555668999999999999999999999999999888764
No 118
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.9e-49 Score=395.14 Aligned_cols=370 Identities=24% Similarity=0.258 Sum_probs=277.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|..|.+. +++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++|+ .+.. +.
T Consensus 30 ~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~-~~~~---d~ 105 (417)
T PF00501_consen 30 RVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIIT-SEAV---DS 105 (417)
T ss_dssp HHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEE-CHHH---SC
T ss_pred HHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccccccccccccccccccceeEEEE-eccc---cc
Confidence 478999999988 999999999999999999999999999999999999999999999999999999997 1000 01
Q ss_pred cc--chhhHHhcCCCc--eEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCC-CCCCCeEEEEecCCCCCCC
Q 010344 81 FP--LYSKVAEAGPLK--AVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVY-RPVDSVINILFSSGTTGEP 155 (512)
Q Consensus 81 ~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~TSGtTG~p 155 (512)
.. .+.......... ...++.... .....+...... . . .... ..++++++++|||||||.|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~--~--~-~~~~~~~~~~~~~i~~TSGTTG~p 170 (417)
T PF00501_consen 106 EPLKKLKSIFKQEDPSSSIIILDRDDL----------PKKEALKSASLS--D--E-PQSPEDSPDDPAFILFTSGTTGKP 170 (417)
T ss_dssp HHHHHHHHHHTTSTTTEEEEEESHSSC----------TTCHHHHHHHHC--H--C-SHSTTHTTTSEEEEEEESSSSSSE
T ss_pred cccccchhhhccccccccccccccccc----------cccccccccccc--c--c-cccCCCCccceeEeeccccccccc
Confidence 11 112222222222 222221111 001111111100 0 0 0000 0568899999999999999
Q ss_pred ceEEecCchhHHHHHHhh--ccccccCCcEEEecCCccchhhh-HHHHhhhccCceEEEecCCCc--hhhHHHHHHhcCc
Q 010344 156 KAIPWTQLSPIRCAAEAW--GHIDMKVGDVYCWPTNLGWVMGP-IILFSSFLSGAALALYHGSPL--ERSFGKFVQDSGV 230 (512)
Q Consensus 156 K~v~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~--~~~~~~~l~~~~~ 230 (512)
|+|.++|+++.+.+.... ..+++. |++++..|++|.+++ ..++.+++.|+++++.+.... ++.+++.++++++
T Consensus 171 K~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~ 248 (417)
T PF00501_consen 171 KGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLELISRYKP 248 (417)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTE
T ss_pred cccccccccccccccccccccccccC--ceEEeeccccccccccccccccccccccccccccccccccccchhccccccc
Confidence 999999999998877754 122223 699999999999999 679999999999999875433 4678999999999
Q ss_pred eEEecchHHHHHHHccCCC----CCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccC-CCCC
Q 010344 231 SVLGTVPSLVKAWKNTNCL----QGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGS-MLQP 305 (512)
Q Consensus 231 t~l~~~P~~~~~l~~~~~~----~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~-~~~~ 305 (512)
|+++++|+++..|++..+. ...+++++|.++++|+++++++.+.+++.++..++++.||+||++.+++... ....
T Consensus 249 t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~ 328 (417)
T PF00501_consen 249 TILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDI 328 (417)
T ss_dssp SEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceecccccccceeeecccccccc
Confidence 9999999999999873222 2457889999999999999999999999986558999999999999876543 2223
Q ss_pred CcccccccccCCccEEEeCCC-CCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEE
Q 010344 306 QAFGAFSTATMTTGFVILDEL-GVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKR 383 (512)
Q Consensus 306 ~~~~~~G~p~~~~~~~i~d~~-~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~ 383 (512)
...+++|.|+++++++|+|++ +++++.|+ .|||++ ++..+.+|. .+++.+...|. .++||+|||+|++
T Consensus 329 ~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~--~Gei~i~~~~~~~gy~--~~~~~~~~~~~------~~~~~~TGD~g~~ 398 (417)
T PF00501_consen 329 EKPGSVGKPLPGVEVKIVDPNTGEPLPPGE--PGEIVIRGPNVFSGYY--NDPELTAEAFI------DDGWYRTGDLGRL 398 (417)
T ss_dssp SSTTSEBEESTTEEEEEECTTTSSBESTTS--EEEEEEESTTSBSEET--TBHHHHHHHEE------TTSEEEEEEEEEE
T ss_pred cccccccccccccccccccccccccccccc--cccccccCCccceeee--ccccccccccc------cccceecceEEEE
Confidence 456789999999999999977 99999999 699999 554443322 12223333332 2469999999999
Q ss_pred eCCCeEEEEeccCceeeec
Q 010344 384 TVGGYIIVQGRADDTMNLG 402 (512)
Q Consensus 384 ~~~g~l~i~gR~~d~i~~~ 402 (512)
|+||+++++||.||+||++
T Consensus 399 d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 399 DEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp ETTSEEEEEEEGSCEEEET
T ss_pred CCCCeEEEEEeeCCEEEeC
Confidence 9999999999999999974
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-46 Score=368.12 Aligned_cols=321 Identities=18% Similarity=0.175 Sum_probs=260.5
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEE--ecC
Q 010344 137 RPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALAL--YHG 214 (512)
Q Consensus 137 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~--~~~ 214 (512)
..++++++++|||||||.||+|+++|.++..........+ ...++++...|++|..++..++.++..|+++++ .+.
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 3467899999999999999999999999988776655433 355678889999999998888889999999888 344
Q ss_pred CCchhhHHHHHHhcC--ceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCcc
Q 010344 215 SPLERSFGKFVQDSG--VSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTE 292 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~--~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE 292 (512)
..++..+++.+++++ .++...+|..+..++.... ...+++++|.+++||+++++++.+.+.+ + ++++++.||+||
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~-~-~~~v~~~YG~TE 186 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAA-A-GINVVRTYGMSE 186 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHh-c-CCcEEecccCCc
Confidence 567889999999998 5667778888887765432 2346789999999999999999988875 3 788999999999
Q ss_pred ccceecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccC
Q 010344 293 LASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKG 371 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (512)
++... ...|.|++++++++.| ||+++ ++....+| .+..... .+ ..
T Consensus 187 ~~~~~-----------~~~G~~~~g~~v~i~~-------------Gei~v~g~~~~~gY---~~~~~~~-~~------~~ 232 (358)
T PRK07824 187 TSGGC-----------VYDGVPLDGVRVRVED-------------GRIALGGPTLAKGY---RNPVDPD-PF------AE 232 (358)
T ss_pred cCCCc-----------CcCceeCCCCEEEecC-------------CEEEEecCcccccc---CCCcccc-cc------cC
Confidence 87532 2357899999999842 88888 44444332 2222211 11 23
Q ss_pred ceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCC
Q 010344 372 MHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFT 451 (512)
Q Consensus 372 ~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~ 451 (512)
++||+|||+|++ ++|+++++||.||+||.+|++|+|.+||++|. .||+|.+++|++.+++..+ +.++++++..++..
T Consensus 233 ~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~vv~~~~~~~g-~~~~a~v~~~~~~~ 309 (358)
T PRK07824 233 PGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALA-THPAVADCAVFGLPDDRLG-QRVVAAVVGDGGPA 309 (358)
T ss_pred CCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCcceEEEEecCCCCCc-eEEEEEEEeCCCCC
Confidence 469999999999 89999999999999999999999999999998 8999999999999998888 88999998765443
Q ss_pred CCcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 452 SQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 452 ~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
.+.+++ +++++++|+.|++|..|+++++||+|++||++|++|++++.+
T Consensus 310 -~~~~~i----~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 310 -PTLEAL----RAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred -cCHHHH----HHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 455444 445557888999999999999999999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.8e-44 Score=389.33 Aligned_cols=446 Identities=13% Similarity=0.060 Sum_probs=312.1
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK 80 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~ 80 (512)
.++++|++|.+. +++||+|+|+++|+++|+++++||+++|++.+|+++ +.+++.+++++++++++|++....
T Consensus 466 ~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l----- 538 (1452)
T PTZ00297 466 RARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSV----- 538 (1452)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHH-----
Confidence 368999999999 999999999999999999999999999999999975 467999999999999999987432
Q ss_pred ccchhhHHhcCCCceEEeecc-C-Ccccc--cccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEe---cCCCCC
Q 010344 81 FPLYSKVAEAGPLKAVVLPVI-G-DDVGI--QLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILF---SSGTTG 153 (512)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---TSGtTG 153 (512)
+.+..+....-..+++++.. . ..... .......+|+++++.+... . ........++|++.++| ||||||
T Consensus 539 -~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~~~--~-~~~~~~~~~dDlatIiYtSyTSGTTG 614 (1452)
T PTZ00297 539 -AAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGRLC--P-VPLKEHVTTDTVFTYVVDNTTSASGD 614 (1452)
T ss_pred -HHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCccc--C-ccccCCCCcccEEEEEecCCCCCCCc
Confidence 22222222111222332210 0 00000 0011246799998876421 1 11122336788999996 999999
Q ss_pred CCceEEecCchhHHHHHHhhccc---cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCc
Q 010344 154 EPKAIPWTQLSPIRCAAEAWGHI---DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGV 230 (512)
Q Consensus 154 ~pK~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~ 230 (512)
.||||++||+|+++++....... ...++|++++++|++|.++....+.+++.|+++.+. +++.+++.|++++|
T Consensus 615 ~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~~----d~~~lledL~~~rP 690 (1452)
T PTZ00297 615 GLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRVFVLGLFAHGSAVATV----DAAHLQRAFVKFQP 690 (1452)
T ss_pred CCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHHHHHHHHHcCCEEEeC----CHHHHHHHHHHHCC
Confidence 99999999999999888765422 346789999999999999977778889999998653 46899999999999
Q ss_pred eEEecchHHHHHHHccCC----C----------------------CCC----------------CcCceeEEEeecCCCC
Q 010344 231 SVLGTVPSLVKAWKNTNC----L----------------------QGL----------------DWTKIRSFASTGETSN 268 (512)
Q Consensus 231 t~l~~~P~~~~~l~~~~~----~----------------------~~~----------------~l~~l~~i~~~G~~l~ 268 (512)
|+++++|.+|+.+.+... . ... -...+|.+++||.
T Consensus 691 Tv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga--- 767 (1452)
T PTZ00297 691 TILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVS--- 767 (1452)
T ss_pred EEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCC---
Confidence 999999999997753310 0 000 0146889998873
Q ss_pred chhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCccccccccccccc
Q 010344 269 VDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLG 348 (512)
Q Consensus 269 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~ 348 (512)
++........ +++++.+||.||+.. .+.. ... ...|.|+|+++++|.+....-.... .|||+++. .+
T Consensus 768 ~~~l~~~l~~--~i~i~~g~glTE~~~---~~~~-~~~--~~~G~PlpgvEvKI~~~~E~~~~~~---~GEIlvr~--~k 834 (1452)
T PTZ00297 768 EESTSFSLLE--HISVCYVPCLREVFF---LPSE-GVF--CVDGTPAPSLQVDLEPFDEPSDGAG---IGQLVLAK--KG 834 (1452)
T ss_pred ccccChHHhC--CceEEEecceEEeee---ecCC-CCc--ccCCeecCceEEEEcccccccCCCC---CCeEEEEE--CC
Confidence 1222222222 567899999999532 2222 222 2349999999999987321111122 49998841 11
Q ss_pred ccccccccCcceeEEecCCcccCceeeeecce-EEEeCCCeEEEEeccCceee-ecceecchHHHHHhhhcCCcceeeee
Q 010344 349 ATDRLLNADHEEVYFSGMPIYKGMHLRRHGDI-IKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDGADESILETA 426 (512)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~-~~~~~~g~l~i~gR~~d~i~-~~G~~v~~~~iE~~l~~~~~~v~~~~ 426 (512)
+++ .|++. +.|++||+|.|+||+||+|| .+|++|.|+.||+.+. .+|.|.+++
T Consensus 835 ------dpe------------------~T~e~~~gW~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~-~sp~I~qi~ 889 (1452)
T PTZ00297 835 ------EPR------------------RTLPIAAQWKRDRTLRLLGPPLGILLPVAYEYVIAAELERIFS-QSRYVNDIF 889 (1452)
T ss_pred ------ChH------------------HHHHhhCcCccCCeEEEEeccccceECCCCcEEcHHHHHHHHh-cCCCccEEE
Confidence 222 23332 23457999999999999999 5999999999999998 899999999
Q ss_pred EEeeCCCCCCCceEEEEEEecCCCCC------------------CcHHHHHH----HHHHH---HH--hccCCccceeeE
Q 010344 427 AISVSPAGGGPEVLVICVVLKKGFTS------------------QPVDKLKM----IFSKA---IQ--RNLNPLFKVSLV 479 (512)
Q Consensus 427 v~~~~~~~~~~~~~~a~v~~~~~~~~------------------~~~~~l~~----~~~~~---~~--~~l~~~~~p~~i 479 (512)
|++... ..++|+|+++.+.-. .+..++.+ .+.+. +. +.+..+.+++.|
T Consensus 890 V~Gd~~-----k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~ 964 (1452)
T PTZ00297 890 LYADPS-----RPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYV 964 (1452)
T ss_pred EEecCC-----CceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEE
Confidence 998765 458899988642110 12233322 12222 21 345667788877
Q ss_pred EEec-CC-----CCCCCchHHHHHHHHHHHhhhhc
Q 010344 480 KIVL-EF-----PRTASNKLLRRVLKDQLKHELSV 508 (512)
Q Consensus 480 ~~~~-~i-----P~t~~GKi~r~~l~~~~~~~~~~ 508 (512)
.+++ ++ -.|++.|+.|+.+.+.|+++|++
T Consensus 965 ~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~ 999 (1452)
T PTZ00297 965 HLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIER 999 (1452)
T ss_pred EEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 7764 44 37999999999999999998875
No 121
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=2e-41 Score=328.48 Aligned_cols=289 Identities=14% Similarity=0.122 Sum_probs=227.2
Q ss_pred CCeEEEEecCCCCCCCceEEecCchhHHHHHHhhccccccC--CcEEEecCCccchhhhHH-HHhhhccCceEEEecCCC
Q 010344 140 DSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKV--GDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSP 216 (512)
Q Consensus 140 ~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~ 216 (512)
+..++++|||||||.||+|++||+++.+.+......+++.. .+++++.+|++|.+++.. ++.++..|+++++.+ ..
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CC
Confidence 44789999999999999999999999988877766666643 468999999999988754 778888999998875 45
Q ss_pred chhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccce
Q 010344 217 LERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASS 296 (512)
Q Consensus 217 ~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 296 (512)
++..+++.++.+ |++.++|++++.|.+.. .++++++. ++||+++++++.+.+++. +..++++.||+||++++
T Consensus 174 ~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 667777777643 89999999999987642 35677876 678999999999998764 23469999999999875
Q ss_pred ecccCCCCCCcccccccccCCccEEEeCCCCCCCCCCCCcccccccccccccccccccccCcceeEEecCCcccCceeee
Q 010344 297 YIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRR 376 (512)
Q Consensus 297 ~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (512)
..... .+..|.+.|++++.+ + ++ . +. + ...|++
T Consensus 246 ~~~~~------~~~~~~~~p~~~~~~-~-~~------~----~~--g---------------------------~~~~~~ 278 (386)
T TIGR02372 246 GLREA------PDDPFRLLPDLACFA-D-TL------S----SA--G---------------------------LARRLD 278 (386)
T ss_pred ccccC------CCCCcccCCCccccC-C-Cc------c----CC--C---------------------------ccceee
Confidence 43221 123456666655432 1 11 0 00 0 012579
Q ss_pred ecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHH
Q 010344 377 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVD 456 (512)
Q Consensus 377 TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~ 456 (512)
|||++++|++|+++|+||+||+||++|++|+|.+||++|. .||+|.+++|.. .+ +.+.++|+++++. +..
T Consensus 279 tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~-~~p~V~~~~v~~-----~g-~~~~a~vv~~~~~---~~~ 348 (386)
T TIGR02372 279 LQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILE-RNPRVRAAAVRL-----DG-RRLKAFIVVAEDA---DEA 348 (386)
T ss_pred cCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHH-cCCCceEEEEEc-----CC-ceEEEEEEECCCC---ChH
Confidence 9999999999999999999999999999999999999998 899999998853 24 6889999987643 234
Q ss_pred HHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHH
Q 010344 457 KLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLL 494 (512)
Q Consensus 457 ~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~ 494 (512)
.+.+.+++++.++|++|++|..|.++++||+|++||++
T Consensus 349 ~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 349 ELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 45567777778899999999999999999999999984
No 122
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=9.2e-38 Score=310.99 Aligned_cols=327 Identities=18% Similarity=0.152 Sum_probs=238.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHH---hhccccccCCcEEEecCCccchhh-hHHHHhhhccCceEEEec
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAE---AWGHIDMKVGDVYCWPTNLGWVMG-PIILFSSFLSGAALALYH 213 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~l~~G~~~~~~~ 213 (512)
+.++++.+++||||||.||+|+++|.++...... ....+++.++|++++..+..+..+ +...+.++..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 4567899999999999999999999988654332 233468889999988766554333 333566778899988765
Q ss_pred CCCchhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCC--cCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCc
Q 010344 214 GSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLD--WTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGT 291 (512)
Q Consensus 214 ~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~--l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~t 291 (512)
. ..++.+++.|++++||+++++|+++..|++.....+.+ ..++|.++++||++++++.+.+++.+ ++++++.||+|
T Consensus 153 ~-~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~t 230 (422)
T TIGR02155 153 G-GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLS 230 (422)
T ss_pred C-CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccch
Confidence 3 34688999999999999999999999987654333322 35899999999999999999998888 68999999999
Q ss_pred cccc--eecccCCCCCCcccccccccCCccEEEeC-CCCCCCCCCCCcccccccccccccccccccccCcceeEEecCCc
Q 010344 292 ELAS--SYIQGSMLQPQAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPI 368 (512)
Q Consensus 292 E~~~--~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (512)
|+++ +...+.. ...+. ..+.+++.++|+| ++|+++++|+ .|||+++..... .+
T Consensus 231 E~~~~~~~~~~~~---~~~g~-~~~~~~~~~eivd~~~g~~v~~Ge--~Gelvvt~~~~~-------------~~----- 286 (422)
T TIGR02155 231 EVIGPGVAMECVE---TQDGL-HIWEDHFYPEIIDPHTGEVLPDGE--EGELVFTTLTKE-------------AL----- 286 (422)
T ss_pred hhcCCceeecccc---cCCCc-eEecCeeEEEEECCCCCCCCCCCC--eeEEEEecCCcc-------------cc-----
Confidence 9852 2222211 11111 1122357788999 5799999999 699999532111 11
Q ss_pred ccCceeeeecceEEEeCC-C-----eEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEE
Q 010344 369 YKGMHLRRHGDIIKRTVG-G-----YIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVI 442 (512)
Q Consensus 369 ~~~~~~~~TGD~~~~~~~-g-----~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a 442 (512)
..+||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|. .||+|...+++........ +.+.+
T Consensus 287 --p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~-~~~~v~~~~q~~~~~~~~~-~~~~~ 362 (422)
T TIGR02155 287 --PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVIL-KMDELSPHYQLELTRNGHM-DELTL 362 (422)
T ss_pred --ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHH-hCcCcCCCEEEEEEcCCCc-cEEEE
Confidence 1358999999999876 4 46899999999999999999999999998 8999984454544444333 57778
Q ss_pred EEEecCCCC----CCcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHH
Q 010344 443 CVVLKKGFT----SQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRR 496 (512)
Q Consensus 443 ~v~~~~~~~----~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~ 496 (512)
.|+..++.. ..+...+.+.+++.++++++.+.. ..|+.+++||+|+ ||+.|.
T Consensus 363 ~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 363 KVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 777765431 012344567787888777766421 2333346999988 999763
No 123
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.1e-35 Score=307.93 Aligned_cols=373 Identities=21% Similarity=0.207 Sum_probs=292.5
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
++++|+.|.+. +++++.|+++++.+.+++++++|++++|+.++|++|.++.+.+..++++++++.+++...........
T Consensus 262 a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~ 341 (642)
T COG1020 262 ANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGL 341 (642)
T ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccC
Confidence 45689999999 99999999999999999999999999999999999999999999999999999999984321000000
Q ss_pred cchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWT 161 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s 161 (512)
+. + ........ . ...........+++.+|++|||||||+||||+.+
T Consensus 342 ~~--------------~----------------~~~~~~~~-~---~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~ 387 (642)
T COG1020 342 PG--------------L----------------ALDDALSE-I---PDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIE 387 (642)
T ss_pred Cc--------------c----------------cccccccc-C---CccCcccccCCCCCeEEEEEccCCCCCCCCceec
Confidence 00 0 00000000 0 0000111234557899999999999999999999
Q ss_pred CchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC--CchhhHHHHHHhcCceEEecchHH
Q 010344 162 QLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS--PLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
|+++.+.+.+....+.+..+|+++...++.+....+.+|.++..|+++++.+.. .++..+.+.++++++|++..+|.+
T Consensus 388 h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~ 467 (642)
T COG1020 388 HRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLL 467 (642)
T ss_pred CHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHH
Confidence 999998777777778899999999999998888888999999999999998754 357889999999999999999999
Q ss_pred HHHHHccCCCC--CCCcCceeEEEeecCCCCchhhHHHHHhhC-CCCeeeecCCccccceecccCCCCCCc-cccccccc
Q 010344 240 VKAWKNTNCLQ--GLDWTKIRSFASTGETSNVDDDLWLASKAY-YKPIIECCGGTELASSYIQGSMLQPQA-FGAFSTAT 315 (512)
Q Consensus 240 ~~~l~~~~~~~--~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~-~~~~G~p~ 315 (512)
+..++...... ......+|.+++||+.++..+...+..... ...+.+.||.||+.............. ..++|.|+
T Consensus 468 ~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~ 547 (642)
T COG1020 468 LRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPV 547 (642)
T ss_pred HHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceee
Confidence 99888762211 122235999999999999999887776554 467999999999655433322221111 46899999
Q ss_pred CCccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEec
Q 010344 316 MTTGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGR 394 (512)
Q Consensus 316 ~~~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR 394 (512)
++..+.|+|+.++++|.|. .||+++ +.++..+ +..+++.+...|..+ ++|+|||++++..||.+.++||
T Consensus 548 ~n~~~~ild~~~~~~p~gv--~gel~i~g~~~a~g--y~~~p~lt~~~f~~~------~~y~tgD~~r~~~dg~~e~lgr 617 (642)
T COG1020 548 ANTQLYILDQGLRPLPLGV--PGELYIAGLGLALG--YLNRPDLTAERFIAL------RLYRTGDLARPLADGALEYLGR 617 (642)
T ss_pred CCCeEEEECCCCCcCCCCC--CeeeEECCcchhhh--hcCChhhhHHHhhhc------cCccCCCeeeECCCCeEEEecc
Confidence 9999999998899999999 599999 4444433 334555555555433 3899999999999999999999
Q ss_pred cCceeeecceecchHHHHHhhhcCCc
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGADE 420 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~~~ 420 (512)
.|+++|++|++|.+.+||..+. .+|
T Consensus 618 ~D~qvki~g~Riel~eie~~l~-~~~ 642 (642)
T COG1020 618 KDSQVKIRGFRIELGEIEAALA-EQP 642 (642)
T ss_pred ccceeEeceEecCcHHHHHHHh-cCC
Confidence 9999999999999999999997 664
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=100.00 E-value=8.9e-31 Score=260.76 Aligned_cols=329 Identities=14% Similarity=0.089 Sum_probs=222.1
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEe
Q 010344 137 RPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALY 212 (512)
Q Consensus 137 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~ 212 (512)
.+.++++.+++||||||.||+|.+||.++........ ...++.++|+++...++.+..+... .++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 3556889999999999999999999999876554433 2358899999999888877655543 56677788877653
Q ss_pred cCCCchhhHHHHHHhcCceEEecchHHHHHHHccCCCCCC--CcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCC
Q 010344 213 HGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGL--DWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGG 290 (512)
Q Consensus 213 ~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~--~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~ 290 (512)
. . ....++.|+++++|.+.++|+.+..|++.....+. ...++|.+++|||++++++.+.+++.+ ++++++.||+
T Consensus 163 ~-~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~ 238 (445)
T TIGR03335 163 G-K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGS 238 (445)
T ss_pred C-c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCCh
Confidence 3 2 24568999999999999999998887764333232 246899999999999999999988877 7899999999
Q ss_pred ccccceecccCCCCCCcccccccccCCccEEEeCCC-CCCCCCCCCcccccccccccccccccccccCcceeEEecCCcc
Q 010344 291 TELASSYIQGSMLQPQAFGAFSTATMTTGFVILDEL-GVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIY 369 (512)
Q Consensus 291 tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~-~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (512)
||++.. ..+... .....+.+.+.++|+|++ +.++++|+ .|||+++....... ....-.++
T Consensus 239 TE~~~~-~~c~~~-----~g~h~~~d~~~vEIvDp~~~~~vp~Ge--~GELvvT~L~~~~~------r~~~PliR----- 299 (445)
T TIGR03335 239 TEGTMC-GECQAV-----AGLHVPEDLVHLDVYDPRHQRFLPDGE--CGRIVLTTLLKPGE------RCGSLLIN----- 299 (445)
T ss_pred hhhhhe-EEecCC-----CCccccCCceEEEEEcCCCCCCCcCCC--ceEEEEEecCCCCc------cCCceEEE-----
Confidence 998632 222211 112234456789999976 46789999 69999954322100 00000232
Q ss_pred cCceeeeecceEEEeC-C----C----eEEEEeccCceeeecceecchHHHHHhhhcCC---cceeeeeEEeeCCCCCCC
Q 010344 370 KGMHLRRHGDIIKRTV-G----G----YIIVQGRADDTMNLGGIKTSSVEIERVCDGAD---ESILETAAISVSPAGGGP 437 (512)
Q Consensus 370 ~~~~~~~TGD~~~~~~-~----g----~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~---~~v~~~~v~~~~~~~~~~ 437 (512)
|+|||++++.. + | .+...||.||+++++|.+|+|.+||++|. .+ +++...+-+.......+.
T Consensus 300 -----YrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~-~~~~~~~~~~~~~~~~~~~~~~~ 373 (445)
T TIGR03335 300 -----YDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVF-QRENMDSLTGEYEAFLYGEEEGE 373 (445)
T ss_pred -----eecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHh-ccCCCCCCCccEEEEEecCCCCC
Confidence 89999999732 2 2 24456999999999999999999999998 74 554333323222222222
Q ss_pred ceEEEEEEecCCCCCCcHHHHHHHHHHH----H---HhccCCccceeeEEEe--cCCCCCC-CchHHH
Q 010344 438 EVLVICVVLKKGFTSQPVDKLKMIFSKA----I---QRNLNPLFKVSLVKIV--LEFPRTA-SNKLLR 495 (512)
Q Consensus 438 ~~~~a~v~~~~~~~~~~~~~l~~~~~~~----~---~~~l~~~~~p~~i~~~--~~iP~t~-~GKi~r 495 (512)
..+.+.|+..+... .+.+++.+.+.+. + ...+....+...+.++ ..+|+++ .||..|
T Consensus 374 ~~~~v~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 374 ITLRVSLECEDKDN-CSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred ceEEEEEEecCccc-chHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 46666677765433 3445555555544 2 1111111222344454 4799983 688766
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.98 E-value=2.7e-31 Score=274.19 Aligned_cols=467 Identities=16% Similarity=0.099 Sum_probs=296.8
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
.+.+++.|... ..+|+.|++++..+.++++..++++++|..+++++|.++.-++...+...-.-..-....+. ...
T Consensus 79 ~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~---~~l 155 (1032)
T KOG1178|consen 79 SNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIV---RRL 155 (1032)
T ss_pred cchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceeh---hhh
Confidence 35677778777 88999999999999999999999999999999999999811111111111111000000000 000
Q ss_pred cchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEec
Q 010344 82 PLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWT 161 (512)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s 161 (512)
+.+.........+..+. .....+..+..... .......-++..+.+.||||+||.||+|.-+
T Consensus 156 ~i~~~~~~~~~~~~sv~------------~~~~~f~~~~~~~~------~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~ 217 (1032)
T KOG1178|consen 156 NIIDILLNSLFPKLSVE------------TIADSFQMVLHNED------TREIRVGGNDSTALLSFTSGSTGVPKGVAGT 217 (1032)
T ss_pred hhHHHHhhccccccchh------------hccchhhhhhccCC------CcceeeecccccceEeecccccccccccchh
Confidence 00000000000000000 00011111111111 1111223456789999999999999999999
Q ss_pred CchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCC--chhhHHHHHHhcCceEEecchH
Q 010344 162 QLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSP--LERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~--~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
|..+.....+....+..+..+++-.....+..-.... +...+..|+.+..+.... .+.++.+.++++++++++.+|+
T Consensus 218 ~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a 297 (1032)
T KOG1178|consen 218 HFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPA 297 (1032)
T ss_pred HHHHHhhhhhccccCCcCccchhhhhheeecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechh
Confidence 9999999988888888888887633333333322233 444455555555543322 2689999999999999999999
Q ss_pred HHHHHHccCCCC-------------CCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCC
Q 010344 239 LVKAWKNTNCLQ-------------GLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQP 305 (512)
Q Consensus 239 ~~~~l~~~~~~~-------------~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~ 305 (512)
+.+.++...... ....+.|+....+||+...++...+...+.-.-...-|+.++.............
T Consensus 298 ~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s 377 (1032)
T KOG1178|consen 298 MCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPS 377 (1032)
T ss_pred hhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcc
Confidence 988876654321 1112379999999999988887755444322223344888876654432221111
Q ss_pred C---cccccccccC-------CccEEEeCCCCCCCCCCCCccccccccccccccc---ccccccCcc--eeEEecCCccc
Q 010344 306 Q---AFGAFSTATM-------TTGFVILDELGVPYPDDQPCVGEVGLFPLYLGAT---DRLLNADHE--EVYFSGMPIYK 370 (512)
Q Consensus 306 ~---~~~~~G~p~~-------~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~ 370 (512)
. ....+..+.. ....++....+.+.+.++ |-.+++...+... .++..++.. +.++.. ..
T Consensus 378 ~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~d---~~ 451 (1032)
T KOG1178|consen 378 KVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGV---GKGCLGAEQNLSSWVVDGYSTPENFLPNFLTVD---GV 451 (1032)
T ss_pred cceecceeEEeccchhhccCCCcceeeeeccCcccCCcc---cceeecccccccceeeccccchhhcCCcccccc---cc
Confidence 1 0111111111 123334444444444443 3333322211100 111122211 111110 13
Q ss_pred CceeeeecceEEEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCC
Q 010344 371 GMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGF 450 (512)
Q Consensus 371 ~~~~~~TGD~~~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~ 450 (512)
.+++|+|||+|+...+|.+.+.||.|++||.+|.++.+.+|+.++. .||.|.++.+....+...+ +.+.+||+...+.
T Consensus 452 ~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~-~~p~v~~~itl~~~~~~~~-~~l~aFvv~~~~~ 529 (1032)
T KOG1178|consen 452 KARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVE-VHPDVKEAITLARENSTVG-QTLLAFVVERGGS 529 (1032)
T ss_pred hhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhc-cCcchhhhheeeeeccccC-ceEEEEEeccCCC
Confidence 4568999999999999999999999999999999999999999998 8999999999999988777 8999999998865
Q ss_pred CCCcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHH
Q 010344 451 TSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQL 502 (512)
Q Consensus 451 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~ 502 (512)
. ..+...|++++.++|+.|++|..++.++++|+|++||||+++|.+..
T Consensus 530 ~----~~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~~~ 577 (1032)
T KOG1178|consen 530 K----SVLIRDIRNYLKKELASYMLPSLVVPLAKVPLNPNGKVDKKALLEYN 577 (1032)
T ss_pred C----chhHHHHHHhhcccccceecceEEEEhhhCCcCCCCCcChhhhhhhh
Confidence 4 22367788888899999999999999999999999999999999833
No 126
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=1.6e-27 Score=224.71 Aligned_cols=325 Identities=21% Similarity=0.181 Sum_probs=234.1
Q ss_pred CCCCCeEEEEecCCCCCCCceEEecCchhHHHHHHh---hccccccCCcEEEecCCcc-chhhhHHHHhhhccCceEEEe
Q 010344 137 RPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEA---WGHIDMKVGDVYCWPTNLG-WVMGPIILFSSFLSGAALALY 212 (512)
Q Consensus 137 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~l~~G~~~~~~ 212 (512)
.+.++...+-.||||||+|+.+.+++..+......+ +...+...+|++..+.... +..++...+++--.|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 445667778889999999999999998765544433 3455788999987766543 444455566777788887776
Q ss_pred cCCCchhhHHHHHHhcCceEEecchHHHHHHHccCCCCC--CCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCC
Q 010344 213 HGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQG--LDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGG 290 (512)
Q Consensus 213 ~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~--~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~ 290 (512)
.+ -..+..+.+++++++|++.++|+.+..|++.....+ .+-.++|.+++|+|++++++++.++.++ ++..++.||+
T Consensus 167 ~~-g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGl 244 (438)
T COG1541 167 SG-GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGL 244 (438)
T ss_pred CC-ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeecccc
Confidence 54 344788999999999999999999999988876553 3335899999999999999999999999 8999999999
Q ss_pred cccccee-cccCCCCCCcccccccccCCccEEEeC-CCCCCCCCCCCcccccccccccccccccccccCcceeEEecCCc
Q 010344 291 TELASSY-IQGSMLQPQAFGAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPI 368 (512)
Q Consensus 291 tE~~~~~-~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (512)
||..+.. ..|.... -.-..-+...++|+| ++|++++.|+ .|||+++...-.+. -..+
T Consensus 245 tE~~g~g~~eC~~~~-----glhi~eD~~~~Ei~dP~t~e~l~dge--~GelV~T~L~~~~~----------PlIR---- 303 (438)
T COG1541 245 TEGFGPGAGECTERN-----GLHIWEDHFIFEIVDPETGEQLPDGE--RGELVITTLTKEGM----------PLIR---- 303 (438)
T ss_pred ccccCCccccccccc-----CCCcchhhceeeeecCCcCccCCCCC--eeEEEEEeccccCc----------ceEE----
Confidence 9997652 3332211 111344678899999 6789999999 69999953321110 0232
Q ss_pred ccCceeeeecceEEEeCC----Ce-----EEEEeccCceeeecceecchHHHHHhhhcCCccee-eeeEEeeCCCCCCCc
Q 010344 369 YKGMHLRRHGDIIKRTVG----GY-----IIVQGRADDTMNLGGIKTSSVEIERVCDGADESIL-ETAAISVSPAGGGPE 438 (512)
Q Consensus 369 ~~~~~~~~TGD~~~~~~~----g~-----l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~-~~~v~~~~~~~~~~~ 438 (512)
|+|||+..+.++ |+ ..|.||.+|+++++|.+|+|..||++|. +.+.+. +..++... .... +
T Consensus 304 ------YrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~-~~~~~~~~yqi~~~~-~~~~-d 374 (438)
T COG1541 304 ------YRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLL-QIPEVTPHYQIILTR-NGGL-D 374 (438)
T ss_pred ------EEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHh-cccCCCceEEEEEec-CCCC-c
Confidence 899999998763 32 3589999999999999999999999999 889888 66666655 3333 7
Q ss_pred eEEEEEEecCCCCC-CcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHH
Q 010344 439 VLVICVVLKKGFTS-QPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLR 495 (512)
Q Consensus 439 ~~~a~v~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r 495 (512)
.+.+.|++.++... .+...+.+.+...+...+.- ..--.++.+.++|++.. |..|
T Consensus 375 ~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 375 ELTVRVELENEAEELEDERRLAKKLIKNIKSELGV-RVEVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred eEEEEEEecCcccchHHHHHHHHHHHHHHHhhcCC-ceEEEEEeccceecccC-ceeE
Confidence 89999999875220 12223334555555443321 11134444568999864 6543
No 127
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.96 E-value=3.5e-26 Score=229.35 Aligned_cols=473 Identities=15% Similarity=0.121 Sum_probs=309.9
Q ss_pred HHHHHHHHhcc--CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCc------CHHHHHHHHHhcCccEEEeccch
Q 010344 3 YRLVANALDTM--FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSF------AAREIATRLRVSKAKGIFTQDFI 74 (512)
Q Consensus 3 ~~~~a~~L~~~--i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~------~~~~l~~~l~~~~~~~iv~~~~~ 74 (512)
|.+++..|+.+ +++||.|++++++++|++++++||+.+|.+++|+.|.- ....+..+++.+++++|++++..
T Consensus 811 va~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v 890 (1363)
T KOG3628|consen 811 VARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKV 890 (1363)
T ss_pred HHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHH
Confidence 57888999888 99999999999999999999999999999999998754 23578899999999999999865
Q ss_pred hccCccccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 010344 75 LRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGE 154 (512)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 154 (512)
....+..+....+.....+...+++..- .+|..-...... .....++....++.+|++-+.--++|.
T Consensus 891 ~~lLrsr~~s~~~~~s~~p~i~~~~~~~-----------~t~~k~~~~~~k--~~~~~~~g~~~k~~~a~v~~~~~~dg~ 957 (1363)
T KOG3628|consen 891 LKLLRSREASAHVDQSAIPLILVLPKLP-----------ETIRKRKKNIKK--LNTPTPPGLNNKETPALVWFNVSTDGM 957 (1363)
T ss_pred HHHHhhhhHHHHhhhhcchhhhcccccc-----------hhhhhhhhhhhc--cCCCCCccccCCCceEEEEEEecCCcc
Confidence 4333333333333333333333322110 012211111111 112223344567789999998889999
Q ss_pred CceEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhH-HHHhhhccCceEEEecCCC---chhhHHHHHHhcCc
Q 010344 155 PKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSP---LERSFGKFVQDSGV 230 (512)
Q Consensus 155 pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~---~~~~~~~~l~~~~~ 230 (512)
-.++.+||.++++.++......-+.+...++.+.+.+...|+. +++...+.|...++.++.. ++..++..|+++++
T Consensus 958 l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kv 1037 (1363)
T KOG3628|consen 958 LIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKV 1037 (1363)
T ss_pred eeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccc
Confidence 9999999999999999888777777766666667666666664 5888999999988876533 47789999999999
Q ss_pred eEEecchHHHHHHHccCCCCCCCcCce------eEEEeecCCCCchhhHHHHHhhCC----C-Ce-------------ee
Q 010344 231 SVLGTVPSLVKAWKNTNCLQGLDWTKI------RSFASTGETSNVDDDLWLASKAYY----K-PI-------------IE 286 (512)
Q Consensus 231 t~l~~~P~~~~~l~~~~~~~~~~l~~l------~~i~~~G~~l~~~~~~~~~~~~~~----~-~i-------------~~ 286 (512)
.-++.+-..+..+....+....+++.. ..++..-++....+...+.+.+.. . .+ .+
T Consensus 1038 kDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r 1117 (1363)
T KOG3628|consen 1038 KDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLR 1117 (1363)
T ss_pred cccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhc
Confidence 999999888887765544333332211 223333444334444444433311 0 12 23
Q ss_pred ecCCccccceecccCCCCCCcc-------------cccccccCCccEEEeC-CCCCCCCCCCCccccccccccccc--cc
Q 010344 287 CCGGTELASSYIQGSMLQPQAF-------------GAFSTATMTTGFVILD-ELGVPYPDDQPCVGEVGLFPLYLG--AT 350 (512)
Q Consensus 287 ~yG~tE~~~~~~~~~~~~~~~~-------------~~~G~p~~~~~~~i~d-~~~~~~~~g~~~~Gel~v~~~~~~--~~ 350 (512)
.|...|-.....-......... --.|...+++++.|++ |+..+|..|+ .||||+.+..-. .+
T Consensus 1118 ~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge--~GEIW~~S~hnA~~~~ 1195 (1363)
T KOG3628|consen 1118 SYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGE--LGEIWVNSAHNASCSF 1195 (1363)
T ss_pred cccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccccccccCC--cceEEecccccccccc
Confidence 3333333222211111111111 1236677899999999 4567999999 799999322111 11
Q ss_pred ccccc--cCcceeEEecCCcccCceeeeecceEEEe------CCC----eEEEEeccCceeeecceecchHHHHHhhhcC
Q 010344 351 DRLLN--ADHEEVYFSGMPIYKGMHLRRHGDIIKRT------VGG----YIIVQGRADDTMNLGGIKTSSVEIERVCDGA 418 (512)
Q Consensus 351 ~~~~~--~~~~~~~~~~~~~~~~~~~~~TGD~~~~~------~~g----~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~ 418 (512)
..+.. .+....... .....+..|-||||+|+.. +.+ -+|++|-.++.+.++|.+.+|.+||.-+...
T Consensus 1196 ~~~d~~~~~~fn~rl~-~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~v 1274 (1363)
T KOG3628|consen 1196 TIGDELRSNHFNARLS-SGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERV 1274 (1363)
T ss_pred ccCchhhhhhhhhhcc-ccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHh
Confidence 11000 000011110 1223466799999999963 222 4899999999999999999999999999888
Q ss_pred CcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce-eeEEEec--CCCCCCCchHHH
Q 010344 419 DESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV-SLVKIVL--EFPRTASNKLLR 495 (512)
Q Consensus 419 ~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p-~~i~~~~--~iP~t~~GKi~r 495 (512)
||.|-+|+|+... ..+++.+++..+ ....+|.-.+.. .-|..+.+. ..+.+++ .+|+++.|--.|
T Consensus 1275 H~~I~~cavF~~~------glvVvviE~~gq---~~~~~LvPlIv~---~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R 1342 (1363)
T KOG3628|consen 1275 HPSIGGCAVFQAT------GLVVVVIECHGQ---QELADLVPLIVN---VVLEEHYIILDVVAFVDKGVFPRNSRGEKQR 1342 (1363)
T ss_pred cccccceeeEeeC------CeEEEEEEecCc---hhHhhhhHHHHH---HHHhhcceEEEEEEEecCCccccCCchhhHH
Confidence 9999999998664 477777777652 334445444443 334444555 5666776 599999999999
Q ss_pred HHHHHHHH
Q 010344 496 RVLKDQLK 503 (512)
Q Consensus 496 ~~l~~~~~ 503 (512)
..+++.+-
T Consensus 1343 ~~I~~~w~ 1350 (1363)
T KOG3628|consen 1343 AHILDSWL 1350 (1363)
T ss_pred HHHHHHHH
Confidence 99888654
No 128
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=5.3e-22 Score=188.42 Aligned_cols=122 Identities=14% Similarity=0.126 Sum_probs=106.2
Q ss_pred cCceeeeecceEEE-eCCCeEEEEeccCceeeecc---eecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEE
Q 010344 370 KGMHLRRHGDIIKR-TVGGYIIVQGRADDTMNLGG---IKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVV 445 (512)
Q Consensus 370 ~~~~~~~TGD~~~~-~~~g~l~i~gR~~d~i~~~G---~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~ 445 (512)
..+|||+|||+|++ |++|+++|+||.+ +| ++|+|. ||++|. +||+|.+++|++++++..| +.++|+|+
T Consensus 206 ~~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~-~hp~V~eaaVvgvpd~~~g-e~v~A~Vv 277 (365)
T PRK09188 206 PSRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALK-SDPAVSDVAIALFSLPAKG-VGLYAFVE 277 (365)
T ss_pred ccCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHH-hCCCccEEEEEEEEcCCCC-eEEEEEEE
Confidence 35579999999998 6999999999987 78 899999 999998 8999999999999999999 89999999
Q ss_pred ecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhhh
Q 010344 446 LKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELS 507 (512)
Q Consensus 446 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 507 (512)
+... .+.+++.++++ ++|++ ++|+.|.++++||+|++||++|+.|++...+..+
T Consensus 278 ~~~~---~~~~el~~~l~----~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~~ 331 (365)
T PRK09188 278 AELP---ADEKSLRARLA----GAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQID 331 (365)
T ss_pred ECCC---CCHHHHHHHHH----hhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhcccc
Confidence 8742 55556655554 67888 9999999999999999999999999998755443
No 129
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.85 E-value=3.9e-20 Score=166.39 Aligned_cols=187 Identities=17% Similarity=0.137 Sum_probs=134.8
Q ss_pred cHHHHHHHHhc-c-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCc
Q 010344 2 SYRLVANALDT-M-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGR 79 (512)
Q Consensus 2 ~~~~~a~~L~~-~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~ 79 (512)
.++++|++|++ . +++||+|+|+++|+++++++++|++++|++++|+| +++++++|++++....
T Consensus 36 ~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~-- 100 (227)
T TIGR03089 36 WVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAA-- 100 (227)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhh--
Confidence 36899999997 7 99999999999999999999999999999999995 6899999999854321
Q ss_pred cccchhhHHhcCCCceEEeec--cCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344 80 KFPLYSKVAEAGPLKAVVLPV--IGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKA 157 (512)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 157 (512)
.. .......+.. ...........+..+|.+.+..... ... +.....++|++.++||||+
T Consensus 101 ----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~D~a~l~yTsg~------ 161 (227)
T TIGR03089 101 ----AA-----GSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD---QFA-PYEPPDATAPALVAGGGEW------ 161 (227)
T ss_pred ----cc-----cCCceEEEeccccccCCCCCCCCcccchhhhhhccCC---CCC-CCCCCCCCcceeeeccccc------
Confidence 11 1112222210 0000000011232456665543221 111 1112356899999999986
Q ss_pred EEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCce
Q 010344 158 IPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVS 231 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t 231 (512)
+|.++..+. ...+++++|+++ ..|++|..|+.. ++.+++.|+++++.+ .++++.+++.|+++|+|
T Consensus 162 ---~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~-rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 162 ---TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVT-HPDPARLDQIAETERVT 227 (227)
T ss_pred ---cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEec-CCCHHHHHHHHHhhcCC
Confidence 566655544 456789999999 999999999865 899999999999985 78999999999999987
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.83 E-value=1e-18 Score=170.04 Aligned_cols=258 Identities=16% Similarity=0.057 Sum_probs=167.8
Q ss_pred eEEEEecCCCCCCCceEEecCchhHHHHH---HhhccccccCCcEEEecCCccchhhhHHHHhhhccC-ceEEEecCCCc
Q 010344 142 VINILFSSGTTGEPKAIPWTQLSPIRCAA---EAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSG-AALALYHGSPL 217 (512)
Q Consensus 142 ~~~i~~TSGtTG~pK~v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G-~~~~~~~~~~~ 217 (512)
-..+..||||||+|-.+..+......... ....+.++..++++.... +..+ .++.++... ..+.+++-...
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~--~ly~~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADN--NLYQSVNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccCh--hHHHHHHhccceeeecCCCcC
Confidence 46677899999999999999876533222 222233566777665542 1111 112222221 11333333345
Q ss_pred hhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCcccccee
Q 010344 218 ERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSY 297 (512)
Q Consensus 218 ~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 297 (512)
.+..++.|++++|+++.++|+.+..|++.....+.+ ..++.++++||.++++..+.+++.| ++++++.||+|| |.++
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GFLA 252 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hheE
Confidence 688999999999999999999999998865444434 4799999999999999999999988 799999999999 6554
Q ss_pred cccCCCCCCcccccccccCCccEE--EeCCCCCCCCCCCCcccccccccccccccccccccCcceeEEecCCcccCceee
Q 010344 298 IQGSMLQPQAFGAFSTATMTTGFV--ILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLR 375 (512)
Q Consensus 298 ~~~~~~~~~~~~~~G~p~~~~~~~--i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (512)
..|... .+-.-.+.+-++ ++|+++++ ..+++.-.... .-.++ |
T Consensus 253 ~eC~~g------~lHl~ed~~~vE~~ivD~~~~~---------~~ViT~L~n~~----------~PlIR----------Y 297 (430)
T TIGR02304 253 STCRCG------TLHLNEDLVHIEKQYLDEHKRF---------VPIITDFTRTT----------QPIVR----------Y 297 (430)
T ss_pred EecCCC------CEEEccccEEEEeeEECCCCce---------EEEEecCCCcc----------ceEEe----------e
Confidence 444321 111122334455 78876532 22333211110 01232 8
Q ss_pred eecceEEEeCC----Ce----E-EEEeccCceeee---cc--eecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEE
Q 010344 376 RHGDIIKRTVG----GY----I-IVQGRADDTMNL---GG--IKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLV 441 (512)
Q Consensus 376 ~TGD~~~~~~~----g~----l-~i~gR~~d~i~~---~G--~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~ 441 (512)
+|||++...++ |. + .|.||.+|+++. +| .+++|..++.++....+.|.+..++.... +.+.
T Consensus 298 rtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~~-----~~l~ 372 (430)
T TIGR02304 298 RLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTGS-----AQLE 372 (430)
T ss_pred eCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEccC-----CeEE
Confidence 99999987543 32 3 378999999985 44 44599999988553678899988876432 5666
Q ss_pred EEEEec
Q 010344 442 ICVVLK 447 (512)
Q Consensus 442 a~v~~~ 447 (512)
+.++..
T Consensus 373 v~~~~~ 378 (430)
T TIGR02304 373 LIADCE 378 (430)
T ss_pred EEEEeC
Confidence 666653
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.60 E-value=1.5e-13 Score=139.62 Aligned_cols=461 Identities=14% Similarity=0.081 Sum_probs=274.9
Q ss_pred HHHHHHHHhcc--CCCCCEEEEEcCCC--HHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccC
Q 010344 3 YRLVANALDTM--FSKGDAIAIDMPMT--VHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGG 78 (512)
Q Consensus 3 ~~~~a~~L~~~--i~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~ 78 (512)
+.++|+.-+.+ +.++|+|.++...+ .++++..++|...|.+.+|+++..+.+++..+++....+++++....++.+
T Consensus 134 A~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~ 213 (1363)
T KOG3628|consen 134 AEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAF 213 (1363)
T ss_pred HHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHh
Confidence 56778855555 99999999998876 799999999999999999999999999999999999999999887543221
Q ss_pred ccccchhhHHhcCCCceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010344 79 RKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAI 158 (512)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v 158 (512)
.... . ..+ .+....|....+........ ....+..... ..+|-||++++|.--|+
T Consensus 214 ~~~~---------~-----------~~s---~~k~v~~w~t~~~k~~~~~~-k~~~P~~~~~-~~~i~~t~s~l~~~~g~ 268 (1363)
T KOG3628|consen 214 INDN---------S-----------PVS---LAKAVAWWKTNDFKGNYTKD-KIKKPRMQLP-YGYIEFTRSPLGNLIGV 268 (1363)
T ss_pred hhcc---------C-----------ccc---HHHHHHhhhcccccceeehh-hccCCceeee-eEEEEEeccchhceeee
Confidence 1100 0 000 01111122222111110000 0111111222 78999999999999999
Q ss_pred EecCchhHHHHHHhhc--------------------cccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCCC-
Q 010344 159 PWTQLSPIRCAAEAWG--------------------HIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGSP- 216 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~- 216 (512)
+.+|. +...++.... .++....+.++.........|+.. ++.+++.|.|.+..+...
T Consensus 269 V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l 347 (1363)
T KOG3628|consen 269 VYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVL 347 (1363)
T ss_pred Eeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhc
Confidence 99997 4443322211 123345666676666676777765 899999999999988643
Q ss_pred -chhhHHHHHHhcCceEEecchHHHHHHHc-c----------CCCCCCCcCceeEEEeecCCCCchhhHHHHHhhC----
Q 010344 217 -LERSFGKFVQDSGVSVLGTVPSLVKAWKN-T----------NCLQGLDWTKIRSFASTGETSNVDDDLWLASKAY---- 280 (512)
Q Consensus 217 -~~~~~~~~l~~~~~t~l~~~P~~~~~l~~-~----------~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~---- 280 (512)
.+..+...+-++|+++++.--..+..... + .+....+++++|.+.+.-+.+..+..+....++.
T Consensus 348 ~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg 427 (1363)
T KOG3628|consen 348 KPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLG 427 (1363)
T ss_pred CCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhccccc
Confidence 35678888999999998776554443321 1 1122357899999999999988876554433331
Q ss_pred -----------------CCCeeeecCCccccceecccCCCC-----------------------------CCcccccccc
Q 010344 281 -----------------YKPIIECCGGTELASSYIQGSMLQ-----------------------------PQAFGAFSTA 314 (512)
Q Consensus 281 -----------------~~~i~~~yG~tE~~~~~~~~~~~~-----------------------------~~~~~~~G~p 314 (512)
|.-.+..=+++|.+......+... ......+|..
T Consensus 428 ~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i 507 (1363)
T KOG3628|consen 428 ETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCI 507 (1363)
T ss_pred CcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCcccccee
Confidence 111222333355544332222100 0001123333
Q ss_pred cCC-ccEEEeC-CCCCCCCCCCCcccccccccccccccccccccCccee-----EEecCCcccCceeeeecceEEEeCCC
Q 010344 315 TMT-TGFVILD-ELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEV-----YFSGMPIYKGMHLRRHGDIIKRTVGG 387 (512)
Q Consensus 315 ~~~-~~~~i~d-~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~TGD~~~~~~~g 387 (512)
.+| ..+.+++ +..+.|..++ +|||||.+...+...+..+...... ++..........+.|||=+|++ .+|
T Consensus 508 ~~g~~t~~vv~~~t~~LC~~~e--VGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv-~~g 584 (1363)
T KOG3628|consen 508 MPGDATLAVVNPDTNQLCKTDE--VGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFV-HNG 584 (1363)
T ss_pred cccceEEEEeCCCcccccccCc--ceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeee-eCC
Confidence 333 4455555 5577899999 7999995444432222222222111 1111222233346799999999 566
Q ss_pred eEEEEeccCceee-ecceecchH----------HHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHH
Q 010344 388 YIIVQGRADDTMN-LGGIKTSSV----------EIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVD 456 (512)
Q Consensus 388 ~l~i~gR~~d~i~-~~G~~v~~~----------~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~ 456 (512)
.++++|-++|++. ..|...+.. .++.+.+ .-+.|.++.++- + ++..+.++-++.. .++
T Consensus 585 ki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R-~v~~VF~~saf~--~-----E~~~Vv~~esP~a---~e~ 653 (1363)
T KOG3628|consen 585 KIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMR-GVIAVFDVSAFE--D-----EHIVVVVLESPDA---TEE 653 (1363)
T ss_pred eEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHh-ccceEEEEeeee--c-----ceEEEEEEeCcch---hhh
Confidence 6777777777766 566655443 3444454 567788887774 1 5555554444432 222
Q ss_pred HHHHHHHHHHHhccCCcccee----eEEEecCCCCCCCchHHHHHHHHHHHh
Q 010344 457 KLKMIFSKAIQRNLNPLFKVS----LVKIVLEFPRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 457 ~l~~~~~~~~~~~l~~~~~p~----~i~~~~~iP~t~~GKi~r~~l~~~~~~ 504 (512)
+-.++..+-++. +...++.. .++.-+.+|||+-|-|.-.+++++|.+
T Consensus 654 ~~~q~~~~v~q~-l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~~F~~ 704 (1363)
T KOG3628|consen 654 NSFQWMSRVFQA-LDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQAFLE 704 (1363)
T ss_pred hhhhHHHHHHHH-HHHHhcccceEEEEeccccCCCccccccccHHHHHHHHc
Confidence 223333333322 22223222 334447899999888999999999875
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.27 E-value=1.2e-11 Score=89.66 Aligned_cols=70 Identities=31% Similarity=0.344 Sum_probs=57.7
Q ss_pred HHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce--eeEEEecC-CC
Q 010344 410 EIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV--SLVKIVLE-FP 486 (512)
Q Consensus 410 ~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p--~~i~~~~~-iP 486 (512)
|||++|. +||+|.+++|++.+++..| +.++|++++ +. +.++++++++|++|+.| ..++.+++ ||
T Consensus 1 EIE~~l~-~~~~V~~~~V~~~~d~~~g-~~l~a~vv~-------~~----~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP 67 (73)
T PF13193_consen 1 EIESVLR-QHPGVAEAAVVGVPDEDWG-ERLVAFVVL-------DE----EEIRDHLRDKLPPYMVPRRIRFVRLDEELP 67 (73)
T ss_dssp HHHHHHH-TSTTEEEEEEEEEEETTTE-EEEEEEEEE-------HH----HHHHHHHHHHS-GGGS-SEEEEEEESSSEE
T ss_pred CHHHHHh-cCCCccEEEEEEEEccccc-ccceeEEEe-------ee----cccccchhhhCCCcceeeEEEEccccCcCC
Confidence 7999998 9999999999999999888 899999998 12 55556666789999999 56666677 99
Q ss_pred CCCCch
Q 010344 487 RTASNK 492 (512)
Q Consensus 487 ~t~~GK 492 (512)
+|++||
T Consensus 68 ~t~~GK 73 (73)
T PF13193_consen 68 RTPSGK 73 (73)
T ss_dssp BETTSS
T ss_pred CCCCCC
Confidence 999998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.02 E-value=1.6e-08 Score=96.71 Aligned_cols=235 Identities=17% Similarity=0.054 Sum_probs=132.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---cccc-ccC-CcEEEecCCccch-hhh----HHHHhhhccCc
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHID-MKV-GDVYCWPTNLGWV-MGP----IILFSSFLSGA 207 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~-~~~-~~~~~~~~p~~~~-~~~----~~~~~~l~~G~ 207 (512)
+.+++...+.||||||.|--+.+.+..+........ ..+. ... .-.++...|-... ... ......+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 455678889999999998767776655544432222 2222 221 1223333333211 111 12333444555
Q ss_pred eEEEecCCCchhhHHHHH----HhcCceEEecchHHHHHHHccCCCCCC--CcC-ceeEEEeecCC------CC-chhhH
Q 010344 208 ALALYHGSPLERSFGKFV----QDSGVSVLGTVPSLVKAWKNTNCLQGL--DWT-KIRSFASTGET------SN-VDDDL 273 (512)
Q Consensus 208 ~~~~~~~~~~~~~~~~~l----~~~~~t~l~~~P~~~~~l~~~~~~~~~--~l~-~l~~i~~~G~~------l~-~~~~~ 273 (512)
...+-....+.+.+++.+ .+.++..+++.|.++..++...+..+. .++ ..+.+-.||-+ ++ +++.+
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 533322334555555544 467788999999988777654433333 333 45666677644 44 34455
Q ss_pred HHHHhhCCC----CeeeecCCccccceecccCCCCCCcccccccccCCccEEEeCC-CCCCCCCCCCccccccccccccc
Q 010344 274 WLASKAYYK----PIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDE-LGVPYPDDQPCVGEVGLFPLYLG 348 (512)
Q Consensus 274 ~~~~~~~~~----~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~~~Gel~v~~~~~~ 348 (512)
.+.+.+ ++ .+++.||+||.......+..... ...++ +.|.|+ +.++++.|+ .|-|.+-.....
T Consensus 247 ~l~~~~-Gv~~~~~i~~~ygmtEl~s~~~~~~~~~~-------~~p~w--V~iRDp~tl~~~~~Ge--~Gli~vidl~~~ 314 (365)
T PF04443_consen 247 RLQEVF-GVIPIENIYDMYGMTELNSQAYECGHGHF-------HVPPW--VIIRDPETLEPLPPGE--TGLIQVIDLANT 314 (365)
T ss_pred HHHHHH-CCCCHHHeeeeeeccccchhheeCCCCcc-------cCCCe--EEEECCCCCcCCCCCC--eeEEEEEccccc
Confidence 666667 44 59999999998765544422111 11233 666684 468999999 698888322222
Q ss_pred ccccccccCcceeEEecCCcccCceeeeecceEEEeCC--------CeEEEEeccCceeeecceec
Q 010344 349 ATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVG--------GYIIVQGRADDTMNLGGIKT 406 (512)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~--------g~l~i~gR~~d~i~~~G~~v 406 (512)
.+. +..-|.|+|.+..+ .++.++||.+.. .++|-..
T Consensus 315 s~p---------------------~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~a-e~RGCs~ 358 (365)
T PF04443_consen 315 SYP---------------------GFILTEDLGVLHGDDDCGCRKGKYFEVLGRADGA-EIRGCSL 358 (365)
T ss_pred CCC---------------------cEEEEcceeeecCCCCCCCccCCEEEEEeCCCCC-ccCCcHH
Confidence 111 12469999987554 268899997742 3345433
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.64 E-value=6e-07 Score=91.12 Aligned_cols=164 Identities=16% Similarity=0.092 Sum_probs=86.9
Q ss_pred cCceeEEEeecCCCCchhhHHHHHhhCCCC-eeeecCCccccceecccCCCCCCcccccccccCCccEEEeCCC--C---
Q 010344 254 WTKIRSFASTGETSNVDDDLWLASKAYYKP-IIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDEL--G--- 327 (512)
Q Consensus 254 l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~-i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~--~--- 327 (512)
++.|+++.+.+..-...-...+++.+++.+ +...|++||+.. .+... +...+.+-.|-.+ -.+.++.+ +
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i-~i~~~---~~~~~~~l~~~~~-ffEFip~~~~~~~~ 340 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFI-GIPLD---PEDPGYVLAPDSG-FFEFIPVDEDEQNP 340 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEE-EEES----CCC--EEE-TTSS-EEEEEE-STT----
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEE-EEecC---CCCCceEeecCCe-EEEEEeccCCcccc
Confidence 578896655554444566777888887755 578999999643 22221 1111111122222 45555422 1
Q ss_pred ----C-----CCCCCCCcccccccccccccccccccccCcceeEEecCCcccCceeeeecceEEEeC--CC--eEEEEec
Q 010344 328 ----V-----PYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTV--GG--YIIVQGR 394 (512)
Q Consensus 328 ----~-----~~~~g~~~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~--~g--~l~i~gR 394 (512)
+ .+..|+ ..||+++.. . ++|+ |+.||+.+... ++ .+.|+||
T Consensus 341 ~~~~~~l~~~ele~G~--~YelviTt~-~-------------GLyR----------Y~iGDvVrv~gf~~~~P~i~F~~R 394 (528)
T PF03321_consen 341 SEQPKTLLLHELEVGE--EYELVITTN-S-------------GLYR----------YRIGDVVRVTGFYNQTPRIEFVGR 394 (528)
T ss_dssp ---SSSEEGGG--TT---EEEEEEEST-T-------------S-SS----------EEECEEEEEEEEETTEEEEEEEEE
T ss_pred cCCCceecHHHhcCCC--eEEEEEecc-c-------------ceee----------eecCCEEEEeeccCCCcEEEEecc
Confidence 1 123333 244444211 0 1222 89999999743 33 7999999
Q ss_pred cCceeeecceecchHHHHHhhhcC----CcceeeeeEEeeCCCCCCCceEEEEEEecCC
Q 010344 395 ADDTMNLGGIKTSSVEIERVCDGA----DESILETAAISVSPAGGGPEVLVICVVLKKG 449 (512)
Q Consensus 395 ~~d~i~~~G~~v~~~~iE~~l~~~----~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~ 449 (512)
.+.++.+.|++++-.+|++++... .-.+.+..+......... ..-+.++++...
T Consensus 395 ~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~-~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 395 RGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNP-PHYVLFWELEGE 452 (528)
T ss_dssp TTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSS-BEEEEEEEECS-
T ss_pred CCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCC-CceEEEEEeCCC
Confidence 999999999999999999998743 133667666655322222 466667777654
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.35 E-value=3.2e-05 Score=78.88 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=37.9
Q ss_pred eeecceEEEeC----CCeEEEEeccCceeeecceecchHHHHHhhhc
Q 010344 375 RRHGDIIKRTV----GGYIIVQGRADDTMNLGGIKTSSVEIERVCDG 417 (512)
Q Consensus 375 ~~TGD~~~~~~----~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~ 417 (512)
|+.||+.+... --.+.|+||.+.++.+.|++++-.+++.++..
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 89999999853 34789999999999999999999999998873
No 136
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.99 E-value=2.4e-05 Score=59.73 Aligned_cols=87 Identities=24% Similarity=0.370 Sum_probs=57.5
Q ss_pred ceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCC--CcHHHHHHHHHHHHHhccCCccceeeEE
Q 010344 403 GIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTS--QPVDKLKMIFSKAIQRNLNPLFKVSLVK 480 (512)
Q Consensus 403 G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~--~~~~~l~~~~~~~~~~~l~~~~~p~~i~ 480 (512)
|.+|+|.+||++|. ++|++...+.+.+...... +.+.+.|++.++... .+.+++.+.+.+.+++.+.- .| .+.
T Consensus 1 GvnvfP~~Ie~vl~-~~~~~~~~y~i~v~~~~~~-D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv--~~-~V~ 75 (96)
T PF14535_consen 1 GVNVFPSQIEEVLR-EFPEVSPEYQIVVTREGGL-DELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV--RP-EVE 75 (96)
T ss_dssp TEEE-HHHHHHHHC-TSTTEEEEEEEEEEEETTE-EEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEE
T ss_pred CcEECHHHHHHHHH-hCcCCCCcEEEEEEcCCCC-cEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc--eE-EEE
Confidence 78999999999998 8999984444444444444 789999999886531 13567888888888877652 23 555
Q ss_pred Ee--cCCCCCCCchHHH
Q 010344 481 IV--LEFPRTASNKLLR 495 (512)
Q Consensus 481 ~~--~~iP~t~~GKi~r 495 (512)
++ .+||++ .||..|
T Consensus 76 lv~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 76 LVPPGTLPRS-EGKAKR 91 (96)
T ss_dssp EE-TT-S----SSSS-S
T ss_pred EECCCCccCC-CCcceE
Confidence 55 579998 678665
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.91 E-value=0.00096 Score=67.74 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=36.7
Q ss_pred eeecceEEEe----CCCeEEEEeccCceeeecceecchHHHHHhhh
Q 010344 375 RRHGDIIKRT----VGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 416 (512)
Q Consensus 375 ~~TGD~~~~~----~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~ 416 (512)
||.||+.+.. ....+.|++|.+.+..+.|+|++-.++.+++.
T Consensus 417 YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~ 462 (606)
T PLN02247 417 YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVT 462 (606)
T ss_pred EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHH
Confidence 8999999873 44679999999999999999999999888876
No 138
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.88 E-value=0.0015 Score=66.21 Aligned_cols=42 Identities=19% Similarity=0.287 Sum_probs=36.3
Q ss_pred eeecceEEEe----CCCeEEEEeccCceeeecceecchHHHHHhhh
Q 010344 375 RRHGDIIKRT----VGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 416 (512)
Q Consensus 375 ~~TGD~~~~~----~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~ 416 (512)
||.||+.+.. ....+.|++|.+-+..+.|+|++-.++..++.
T Consensus 423 YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~ 468 (612)
T PLN02620 423 YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVK 468 (612)
T ss_pred EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHH
Confidence 8999999874 34679999999999999999999998887776
No 139
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=78.97 E-value=9.7 Score=37.73 Aligned_cols=89 Identities=16% Similarity=0.072 Sum_probs=65.1
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.+|.+|++. -..-.+|...+...+..... ..++..++++....+-. ......+++++..|+..+.+++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~-~~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNS-IEFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSS-HHHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcc-ceeeeeeccccccccccccccc
Confidence 456677766 12335677777665554443 45788999888777664 2334458899999999999998
Q ss_pred CCchhhHHHHHHhcCceEEec
Q 010344 215 SPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~ 235 (512)
....+.+...+++.++..++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 888899999999999999996
No 140
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=78.67 E-value=8.6 Score=37.91 Aligned_cols=71 Identities=15% Similarity=0.102 Sum_probs=57.1
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCH--HHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccch
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTV--HAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFI 74 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~ 74 (512)
+..+|+.|... ..+||+|.....-+. .-+-..+|+.++|+.++|+.+.. -+....++++.++.+|.+....
T Consensus 119 a~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI~~tps~ 192 (438)
T COG1541 119 AELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVIAATPSY 192 (438)
T ss_pred HHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEEEEChHH
Confidence 56789999999 999999988776221 12667889999999999998843 4566788999999999999863
No 141
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=77.65 E-value=21 Score=33.36 Aligned_cols=58 Identities=17% Similarity=0.226 Sum_probs=42.8
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
+++|+.|.=-.. +---+...+.|...|.-++.+=|..-+.+...+|+..++++++++.
T Consensus 59 l~pG~tIVE~TS-GNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEATS-GNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEEEcCC-ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 999995544433 3444445555555688887777777778889999999999999997
No 142
>PLN02736 long-chain acyl-CoA synthetase
Probab=76.46 E-value=30 Score=36.87 Aligned_cols=100 Identities=8% Similarity=-0.136 Sum_probs=71.3
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|.+.+...+..+. ...++.++|++...++-..- .....++++..|+.++.+.....++++...+++.++..++.
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~ 156 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPE-WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFC 156 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEE
Confidence 467777766554443 34689999999877665443 22347788899999998887778899999999999999999
Q ss_pred chHHHHHHHccCCCCCCCcCceeEEEee
Q 010344 236 VPSLVKAWKNTNCLQGLDWTKIRSFAST 263 (512)
Q Consensus 236 ~P~~~~~l~~~~~~~~~~l~~l~~i~~~ 263 (512)
.+..+..+..... .++.++.++..
T Consensus 157 ~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 157 VPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred CHHHHHHHHHHhh----cCCCceEEEEE
Confidence 9887766544321 23455665543
No 143
>PLN03052 acetate--CoA ligase; Provisional
Probab=68.62 E-value=35 Score=36.98 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=70.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.+|++.-..+..|.+ ...+|...+...+..+. ...++.++|++...+|-.-- ....+++++..|+..+.+.+
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e-~via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH-AVIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCCEEEeeCC
Confidence 346676654433221222 23478877765554443 34688999999988876432 33447899999999999988
Q ss_pred CCchhhHHHHHHhcCceEEecchHH
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
...++.+...+++.++.+++.....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCcc
Confidence 8888999999999999999886643
No 144
>PRK09274 peptide synthase; Provisional
Probab=68.28 E-value=30 Score=35.90 Aligned_cols=98 Identities=9% Similarity=-0.034 Sum_probs=65.9
Q ss_pred CCCeEEEEecCCCC-CCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 139 VDSVINILFSSGTT-GEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 139 ~~~~~~i~~TSGtT-G~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
++.++++....++. +..+...+|...+...+..... ..++.++|++....+-+.. ....+++++..|+..+.++.
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEEEEcCC
Confidence 34555554322221 1223335778777665544433 4578999999887765432 23347889999999998887
Q ss_pred CCchhhHHHHHHhcCceEEecch
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
....+++...+++.++..++..+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 77778899999999999888754
No 145
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=64.41 E-value=43 Score=36.03 Aligned_cols=102 Identities=8% Similarity=-0.061 Sum_probs=73.0
Q ss_pred EEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 158 IPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
..+|...+...+..+.. ..++.++|++...++-..- .+...++++..|+..+.+.....++++...+++.++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 44677777665554443 4588999998877765432 2334778899999999888888889999999999999999
Q ss_pred cchHHHHHHHccCCCCCCCcCceeEEEeec
Q 010344 235 TVPSLVKAWKNTNCLQGLDWTKIRSFASTG 264 (512)
Q Consensus 235 ~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G 264 (512)
+....+..+.+... .++.++.++.-+
T Consensus 184 ~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 98888777654321 234455555443
No 146
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=63.62 E-value=32 Score=34.25 Aligned_cols=109 Identities=11% Similarity=0.024 Sum_probs=75.2
Q ss_pred eEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEE
Q 010344 157 AIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVL 233 (512)
Q Consensus 157 ~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l 233 (512)
++.+|...+...+.++.. .+|+..||++..+.|-+.. .....+++-..|..++...+....+++.=.|++.++-.+
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~-w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l 153 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYE-WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKAL 153 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHH-HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEE
Confidence 445667777665555443 5699999999887776533 223366777888888887766666778888999999999
Q ss_pred ecchHHHHH-----HHcc---------CCCCCCCcCceeEEEeecCC
Q 010344 234 GTVPSLVKA-----WKNT---------NCLQGLDWTKIRSFASTGET 266 (512)
Q Consensus 234 ~~~P~~~~~-----l~~~---------~~~~~~~l~~l~~i~~~G~~ 266 (512)
+..|.+-.. |.+. ...+...++.++.++..+|.
T Consensus 154 ~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed 200 (596)
T KOG1177|consen 154 FAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADED 200 (596)
T ss_pred EccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCC
Confidence 999875332 3222 12334567889998888843
No 147
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=63.49 E-value=46 Score=35.41 Aligned_cols=79 Identities=13% Similarity=-0.033 Sum_probs=62.0
Q ss_pred EEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 158 IPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
..+|.+.+...+..+. ...|+.+||++...+|..--. ...+++++..|+..+.+.....++.+...+++.++.+++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 4678888765554444 346899999999888765432 234788999999999988888889999999999999998
Q ss_pred cch
Q 010344 235 TVP 237 (512)
Q Consensus 235 ~~P 237 (512)
+..
T Consensus 170 ~~~ 172 (647)
T PTZ00237 170 TTN 172 (647)
T ss_pred Ecc
Confidence 764
No 148
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=63.24 E-value=36 Score=35.23 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=66.9
Q ss_pred CCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC
Q 010344 139 VDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS 215 (512)
Q Consensus 139 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 215 (512)
++.++++..-. +.++.-.+|...+...+..... ..++.+++++...++-.... ...+++++..|+..+.....
T Consensus 38 p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~~ 113 (547)
T PRK13295 38 PDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMPI 113 (547)
T ss_pred CCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccccc
Confidence 45566654322 2233346788777655444433 45888999998877755433 34478899999999888777
Q ss_pred CchhhHHHHHHhcCceEEecchH
Q 010344 216 PLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 216 ~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
...+.+...++..+++.++....
T Consensus 114 ~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 114 FRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred cCHHHHHHHHHhcCceEEEEecc
Confidence 77889999999999999887553
No 149
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=62.70 E-value=44 Score=36.24 Aligned_cols=117 Identities=10% Similarity=0.023 Sum_probs=78.0
Q ss_pred CCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---c---ccccCC-----------cEEEecCCccchhhhHHHHh
Q 010344 139 VDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---H---IDMKVG-----------DVYCWPTNLGWVMGPIILFS 201 (512)
Q Consensus 139 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~---~~~~~~-----------~~~~~~~p~~~~~~~~~~~~ 201 (512)
++.++++.... |.+ ...+|...+...+..+.. . .|+.++ |++...++-+ .-.+...++
T Consensus 75 p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~-~ew~~~~lA 149 (746)
T PTZ00342 75 NNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNS-INWLVADLA 149 (746)
T ss_pred CCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCC-HHHHHHHHH
Confidence 45566653322 211 134677776655544333 2 367777 7777666543 223345789
Q ss_pred hhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeec
Q 010344 202 SFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTG 264 (512)
Q Consensus 202 ~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G 264 (512)
++..|+..+.+.....++++...+++-++.++++.+..+..+.+.. ..++.++.++.-+
T Consensus 150 ~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 150 CMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 9999999999888888999999999999999999888887776532 1245666665543
No 150
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=62.14 E-value=50 Score=35.17 Aligned_cols=95 Identities=13% Similarity=-0.096 Sum_probs=67.5
Q ss_pred CCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC
Q 010344 139 VDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS 215 (512)
Q Consensus 139 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 215 (512)
++.+|++.... .|. ...+|.+.+...+..+. ...++.++|++...+|-... ....+++++..|+..+.+...
T Consensus 98 ~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPE-TVVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCcEEEeeCCC
Confidence 45666654322 221 34578877766554443 34588999999988875432 334488999999999998888
Q ss_pred CchhhHHHHHHhcCceEEecchH
Q 010344 216 PLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 216 ~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
..++.+...+++.++..+++...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 88899999999999999887653
No 151
>PLN02246 4-coumarate--CoA ligase
Probab=62.14 E-value=36 Score=35.11 Aligned_cols=83 Identities=13% Similarity=0.019 Sum_probs=61.2
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|+..+......... ..++.++|++....+-+. -....+++++..|+..+.++......++...++..++..++.
T Consensus 50 ~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 128 (537)
T PLN02246 50 VYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIIT 128 (537)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEE
Confidence 4788877655444433 357889999887776543 233347888899999998887777889999999999999887
Q ss_pred chHHHHH
Q 010344 236 VPSLVKA 242 (512)
Q Consensus 236 ~P~~~~~ 242 (512)
.......
T Consensus 129 ~~~~~~~ 135 (537)
T PLN02246 129 QSCYVDK 135 (537)
T ss_pred ccchHHH
Confidence 7655443
No 152
>PLN02654 acetate-CoA ligase
Probab=62.08 E-value=50 Score=35.29 Aligned_cols=96 Identities=15% Similarity=0.065 Sum_probs=68.3
Q ss_pred CCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC
Q 010344 139 VDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS 215 (512)
Q Consensus 139 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 215 (512)
++.+|++.... ..| ....+|.+.+...+..+. ...++.++|++...+|-..- ....+++++..|+..+.+...
T Consensus 103 ~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e-~v~a~lA~~~~Gav~vpv~~~ 178 (666)
T PLN02654 103 GDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME-LPIAMLACARIGAVHSVVFAG 178 (666)
T ss_pred CCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecCCC
Confidence 45566653221 111 134578888766555444 35689999999888776432 233478899999999998888
Q ss_pred CchhhHHHHHHhcCceEEecchH
Q 010344 216 PLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 216 ~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
..++.+...+++.++.++++...
T Consensus 179 ~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 179 FSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCHHHHHHHHHhcCceEEEEcCc
Confidence 88899999999999999987654
No 153
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=59.88 E-value=50 Score=33.71 Aligned_cols=83 Identities=13% Similarity=-0.083 Sum_probs=61.8
Q ss_pred ecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 160 WTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 160 ~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
+|...+...+.... ...++..++++....|-+.. ....+++++..|+..+..+.....+.+...+++.++..++..
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~ 110 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHE-YLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVD 110 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEc
Confidence 77777655443333 23578899998887766542 334478999999999998877778889999999999999888
Q ss_pred hHHHHHH
Q 010344 237 PSLVKAW 243 (512)
Q Consensus 237 P~~~~~l 243 (512)
......+
T Consensus 111 ~~~~~~~ 117 (521)
T PRK06187 111 SEFVPLL 117 (521)
T ss_pred chHHHHH
Confidence 7765544
No 154
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=59.47 E-value=53 Score=34.74 Aligned_cols=97 Identities=18% Similarity=0.102 Sum_probs=68.7
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.+|++.... .+|. .-.+|...+...+..+. ...++.++|++...+|-... ....+++++..|+..+.+..
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPE-AAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEeccCC
Confidence 456677664322 1222 34578877765544443 34688999999988875532 33447889999999998887
Q ss_pred CCchhhHHHHHHhcCceEEecchH
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
...++.+...+++.++..++....
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 888899999999999999987654
No 155
>PRK06839 acyl-CoA synthetase; Validated
Probab=59.31 E-value=62 Score=32.84 Aligned_cols=85 Identities=13% Similarity=0.003 Sum_probs=63.4
Q ss_pred EEecCchhHHHHHHhhcc----ccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEE
Q 010344 158 IPWTQLSPIRCAAEAWGH----IDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVL 233 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l 233 (512)
..+|+..+.......... .++.+++++...++-+.. ....+++++..|+..+..+....++++...+++.+++.+
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i 104 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVL 104 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEE
Confidence 357787776655544432 468899998877766533 333478889999999988877778888999999999999
Q ss_pred ecchHHHHHH
Q 010344 234 GTVPSLVKAW 243 (512)
Q Consensus 234 ~~~P~~~~~l 243 (512)
+..+.....+
T Consensus 105 ~~~~~~~~~~ 114 (496)
T PRK06839 105 FVEKTFQNMA 114 (496)
T ss_pred EEcHHHHHHH
Confidence 9888766543
No 156
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=58.53 E-value=42 Score=34.99 Aligned_cols=84 Identities=17% Similarity=0.080 Sum_probs=63.8
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++.++|++...++-+.. ....+++++..|+.++.......++++...+++.+++.++.
T Consensus 73 ~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 151 (570)
T PRK04319 73 KYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPE-LYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLIT 151 (570)
T ss_pred eecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEE
Confidence 567777765544433 34578899999877765443 23347889999999998887788899999999999999999
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.+..+..+
T Consensus 152 ~~~~~~~~ 159 (570)
T PRK04319 152 TPALLERK 159 (570)
T ss_pred Chhhhhcc
Confidence 88876544
No 157
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=58.18 E-value=55 Score=34.74 Aligned_cols=97 Identities=14% Similarity=0.052 Sum_probs=68.4
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.+|++.... . + .....+|.+.+...+..+.. ..++.++|++...++-... ....+++++..|+..+.+..
T Consensus 80 ~p~~~Al~~~~~-~-~-~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-D-P-GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-C-C-CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecCC
Confidence 356677664321 1 1 12456788887666554443 4578899999887765433 23347789999999999888
Q ss_pred CCchhhHHHHHHhcCceEEecchH
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
...++.+...+++.++..++....
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 888899999999999999987543
No 158
>PRK07788 acyl-CoA synthetase; Validated
Probab=57.81 E-value=45 Score=34.58 Aligned_cols=84 Identities=12% Similarity=-0.004 Sum_probs=62.9
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+. ...++.++|++....+-.- -....+++++..|+..+.++.....+++...+++.+++.++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 467777765544433 3457889999887765432 233447899999999999988888899999999999999998
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.+.+...+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 87766554
No 159
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=57.67 E-value=78 Score=29.10 Aligned_cols=69 Identities=12% Similarity=0.151 Sum_probs=49.2
Q ss_pred HHHHHHHhcc--CCCCCEEEEEcCCCHHHHHHHHHHHHh--------cceEeecCCCc---CHHHHHHHHHhcCccEEEe
Q 010344 4 RLVANALDTM--FSKGDAIAIDMPMTVHAVIIYLAIILA--------GYVVVSIADSF---AAREIATRLRVSKAKGIFT 70 (512)
Q Consensus 4 ~~~a~~L~~~--i~~gd~V~i~~~n~~~~~~~~lA~~~~--------G~~~v~l~~~~---~~~~l~~~l~~~~~~~iv~ 70 (512)
+++.+++.+. +.+||+|++.++-+.|.++++..+... ...++-+++.. ..+.+..+.+..+..+.+.
T Consensus 14 ~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v~ 93 (258)
T PRK10696 14 RQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHIE 93 (258)
T ss_pred HHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEEE
Confidence 4667777776 999999999999999999887666442 23555566543 3455667777777777666
Q ss_pred cc
Q 010344 71 QD 72 (512)
Q Consensus 71 ~~ 72 (512)
+.
T Consensus 94 ~~ 95 (258)
T PRK10696 94 EQ 95 (258)
T ss_pred Ee
Confidence 53
No 160
>PLN03102 acyl-activating enzyme; Provisional
Probab=57.54 E-value=37 Score=35.52 Aligned_cols=82 Identities=12% Similarity=0.007 Sum_probs=62.1
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+.. ..++.++|++...+|-.-. ....+++++..|+.++.++.....+++...+++.+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e-~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPA-MYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 4677777665554443 4578999999887775432 22347889999999999888888899999999999999998
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
.+....
T Consensus 118 ~~~~~~ 123 (579)
T PLN03102 118 DRSFEP 123 (579)
T ss_pred ChhhHH
Confidence 776543
No 161
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=57.41 E-value=1e+02 Score=25.05 Aligned_cols=47 Identities=9% Similarity=-0.050 Sum_probs=36.2
Q ss_pred cchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 191 GWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 191 ~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
.|..|... ....-..|-.++.......++++.+.+.+++|..+..+-
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 37777654 334446788899888778889999999999999876653
No 162
>PRK08315 AMP-binding domain protein; Validated
Probab=57.31 E-value=44 Score=34.64 Aligned_cols=79 Identities=14% Similarity=-0.010 Sum_probs=59.8
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|+..+......... ..++.+++++....+-... ....+++++..|+..+.++.......+...+++.+++.++.
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 121 (559)
T PRK08315 43 RWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPE-WVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIA 121 (559)
T ss_pred EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH-HHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEE
Confidence 3688877655444433 4578899998877665532 24458899999999999888778889999999999999887
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
...
T Consensus 122 ~~~ 124 (559)
T PRK08315 122 ADG 124 (559)
T ss_pred ecc
Confidence 653
No 163
>PLN02565 cysteine synthase
Probab=57.06 E-value=67 Score=30.70 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=51.0
Q ss_pred HHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 6 VANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 6 ~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
+.....+. +.+|....+....+-.-....+++..+|.-+..+-|...+..-...++..++++++++.
T Consensus 54 l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 54 ITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred HHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 33334444 67886655666666667777778888999888877877888889999999999999875
No 164
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=56.76 E-value=34 Score=35.42 Aligned_cols=83 Identities=13% Similarity=-0.004 Sum_probs=63.9
Q ss_pred ecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHH
Q 010344 160 WTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSL 239 (512)
Q Consensus 160 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~ 239 (512)
+|...+...+......+.-.++|++...+|-+.. ....+++++..|+..+.++.....+++...+++.+++.++....+
T Consensus 46 ~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~ 124 (539)
T PRK06334 46 LSYNQVRKAVIALATKVSKYPDQHIGIMMPASAG-AYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQL 124 (539)
T ss_pred ccHHHHHHHHHHHHHHHhhccCCeEEEEcCCchH-HHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHH
Confidence 6888887777666655544689998887776543 233478999999999988877778899999999999999988766
Q ss_pred HHHH
Q 010344 240 VKAW 243 (512)
Q Consensus 240 ~~~l 243 (512)
+..+
T Consensus 125 ~~~~ 128 (539)
T PRK06334 125 MQHL 128 (539)
T ss_pred HHHH
Confidence 5544
No 165
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=56.74 E-value=46 Score=35.22 Aligned_cols=96 Identities=13% Similarity=0.029 Sum_probs=67.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.+|++.. +..+|. .-.+|...+...+..+. ...++.++|++...+|-..- ....+++++..|+..+.+..
T Consensus 65 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e-~v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE-AVFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEEecCC
Confidence 3455666543 222332 23578877765554443 34689999999988876532 23447889999999998887
Q ss_pred CCchhhHHHHHHhcCceEEecch
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
...++.+...+++.++.+++...
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 88889999999999999988754
No 166
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=56.66 E-value=36 Score=33.42 Aligned_cols=67 Identities=15% Similarity=0.090 Sum_probs=54.0
Q ss_pred ccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHHHHH
Q 010344 176 IDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAW 243 (512)
Q Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l 243 (512)
.++..+|++....|-... .+..+++++..|+.++..+.....+.+...+++.+++.++..+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~-~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAE-LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 568899998887776632 3344788889999999888777788999999999999999988766544
No 167
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=56.61 E-value=51 Score=34.15 Aligned_cols=85 Identities=19% Similarity=0.173 Sum_probs=64.8
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..... ..++.+++++....+-...+ ...+++++..|+..+.++.....+++...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 4677766555544433 45788999988877665443 3448899999999999888888899999999999999999
Q ss_pred chHHHHHHH
Q 010344 236 VPSLVKAWK 244 (512)
Q Consensus 236 ~P~~~~~l~ 244 (512)
.+.....+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 887766553
No 168
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=56.39 E-value=66 Score=34.30 Aligned_cols=94 Identities=16% Similarity=-0.016 Sum_probs=67.1
Q ss_pred CCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCC
Q 010344 140 DSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSP 216 (512)
Q Consensus 140 ~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~ 216 (512)
++++.+... .+|. ...+|.+.+...+..+.. ..++.++|++...+|-..- ....+++++..|+..+.+....
T Consensus 99 ~~~a~~~~~--~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e-~~~~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVD--ETHE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQ-AVVAMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEEC--CCCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCeEEEecCCCC
Confidence 455555532 2232 235788877665544443 4588999999988876533 2334788999999999988888
Q ss_pred chhhHHHHHHhcCceEEecchH
Q 010344 217 LERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 217 ~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
.++.+...+++.++.++++...
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~~ 195 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVDG 195 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEccc
Confidence 8899999999999999987643
No 169
>PRK05857 acyl-CoA synthetase; Validated
Probab=56.24 E-value=47 Score=34.37 Aligned_cols=80 Identities=10% Similarity=-0.006 Sum_probs=60.6
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..... ..++.+++++...++-+.. .+..+++++..|+..+.++.....+.+.+.++..++..++.
T Consensus 41 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e-~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~ 119 (540)
T PRK05857 41 ALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE-TYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALV 119 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEE
Confidence 4788877655554443 4578899999887765543 23347889999999999887778889999999999998888
Q ss_pred chHH
Q 010344 236 VPSL 239 (512)
Q Consensus 236 ~P~~ 239 (512)
.+..
T Consensus 120 ~~~~ 123 (540)
T PRK05857 120 APGS 123 (540)
T ss_pred eccc
Confidence 7754
No 170
>PRK13388 acyl-CoA synthetase; Provisional
Probab=54.98 E-value=74 Score=32.90 Aligned_cols=83 Identities=12% Similarity=-0.068 Sum_probs=61.4
Q ss_pred EecCchhHHHHHHhhc---cccc-cCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 159 PWTQLSPIRCAAEAWG---HIDM-KVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~-~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
.+|...+......+.. ..++ .+++++...++-+.. ....+++++..|+..+.+++....+++...+++.++..++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 5688777665555443 3467 688988877765443 2334788999999999988777788999999999999998
Q ss_pred cchHHHHH
Q 010344 235 TVPSLVKA 242 (512)
Q Consensus 235 ~~P~~~~~ 242 (512)
........
T Consensus 105 ~~~~~~~~ 112 (540)
T PRK13388 105 TDAEHRPL 112 (540)
T ss_pred EChhhhHH
Confidence 87655443
No 171
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=54.87 E-value=29 Score=35.69 Aligned_cols=88 Identities=13% Similarity=0.007 Sum_probs=69.5
Q ss_pred eEEecCchhHHHHHHhhccc-----cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCce
Q 010344 157 AIPWTQLSPIRCAAEAWGHI-----DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVS 231 (512)
Q Consensus 157 ~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t 231 (512)
+..+|+..+...+......+ ++..+|++....|-+..+.. ..++++..|+.+.-..+..+..++...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~-~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE-LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 66888888776666555433 36889999988887654333 3678889999999988888899999999999999
Q ss_pred EEecchHHHHHHHc
Q 010344 232 VLGTVPSLVKAWKN 245 (512)
Q Consensus 232 ~l~~~P~~~~~l~~ 245 (512)
.++.....+..+..
T Consensus 122 iif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 122 LIFVDEDFYDKISE 135 (537)
T ss_pred EEEEcCchHHHHHH
Confidence 99998888777643
No 172
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=54.19 E-value=71 Score=32.72 Aligned_cols=100 Identities=16% Similarity=0.059 Sum_probs=67.9
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.++++.... .+..+ .+|...+...+..... ..++.++|++....+-+...- ..+++++..|+.++....
T Consensus 20 ~p~~~a~~~~~~--~~~~~--~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVVR--RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCccc--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCc
Confidence 355566554221 12222 3566666555444433 457889999887766554322 347788999999998887
Q ss_pred CCchhhHHHHHHhcCceEEecchHHHHH
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVPSLVKA 242 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P~~~~~ 242 (512)
....+.+...+++.+++.++..+.....
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPM 122 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHH
Confidence 7788999999999999999988865543
No 173
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=54.02 E-value=54 Score=35.01 Aligned_cols=86 Identities=10% Similarity=-0.106 Sum_probs=65.0
Q ss_pred EEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 158 IPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
..+|...+...+..+.. ..++.++|++...++-+.- .....++++..|+..+.+......+++...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 34788777665554443 4578999998877765433 3344789999999999988888889999999999999999
Q ss_pred cchHHHHHHH
Q 010344 235 TVPSLVKAWK 244 (512)
Q Consensus 235 ~~P~~~~~l~ 244 (512)
+....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8777665543
No 174
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=53.92 E-value=94 Score=27.17 Aligned_cols=87 Identities=11% Similarity=-0.057 Sum_probs=53.0
Q ss_pred EEEecCCc--cchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH------HHHHHHccCCCCCCC
Q 010344 183 VYCWPTNL--GWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS------LVKAWKNTNCLQGLD 253 (512)
Q Consensus 183 ~~~~~~p~--~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~------~~~~l~~~~~~~~~~ 253 (512)
+++...+. .|..|... ....-..|-.++....+..++++.+.+++.+|..+..+-+ .+..+++.......
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~- 164 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY- 164 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC-
Confidence 44444444 47777754 3333357888888887888899999999999998765532 22333332211111
Q ss_pred cCceeEEEeecCCCCchh
Q 010344 254 WTKIRSFASTGETSNVDD 271 (512)
Q Consensus 254 l~~l~~i~~~G~~l~~~~ 271 (512)
.+.+ .+++||.+++++.
T Consensus 165 ~~~v-~i~vGG~~~~~~~ 181 (197)
T TIGR02370 165 RDSV-KFMVGGAPVTQDW 181 (197)
T ss_pred CCCC-EEEEEChhcCHHH
Confidence 1123 3788888887653
No 175
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=53.77 E-value=8.4 Score=26.12 Aligned_cols=11 Identities=36% Similarity=0.528 Sum_probs=9.1
Q ss_pred ccCceeeeecc
Q 010344 369 YKGMHLRRHGD 379 (512)
Q Consensus 369 ~~~~~~~~TGD 379 (512)
.+++-||.|||
T Consensus 69 dngkhwydtgd 79 (80)
T PF05452_consen 69 DNGKHWYDTGD 79 (80)
T ss_pred cCCcccccCCC
Confidence 36778999998
No 176
>PRK13383 acyl-CoA synthetase; Provisional
Probab=53.45 E-value=53 Score=33.69 Aligned_cols=84 Identities=10% Similarity=-0.045 Sum_probs=61.6
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++.+++++...++-.-. ....+++++..|+..+..+.....+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 366666654444333 34578899998877764432 23347788899999999888888899999999999999998
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.+.+...+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 87766544
No 177
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.90 E-value=45 Score=34.47 Aligned_cols=84 Identities=15% Similarity=0.070 Sum_probs=62.4
Q ss_pred EecCchhHHHHHHhhc---cc-cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 159 PWTQLSPIRCAAEAWG---HI-DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
.+|...+...+..... .. ++.+++++...++-.. -.+..+++++..|+..+..+.....+++...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 3677776555443332 33 8889999887776543 33345888999999999988777888999999999999999
Q ss_pred cchHHHHHH
Q 010344 235 TVPSLVKAW 243 (512)
Q Consensus 235 ~~P~~~~~l 243 (512)
..+.....+
T Consensus 114 ~~~~~~~~~ 122 (546)
T PRK08314 114 VGSELAPKV 122 (546)
T ss_pred EccchhhhH
Confidence 887765544
No 178
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=52.83 E-value=68 Score=27.39 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=39.6
Q ss_pred chHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccC
Q 010344 407 SSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLN 471 (512)
Q Consensus 407 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~ 471 (512)
-...|++.+. ..++|.++.|+...+ .+++-|.++.. . ...+++++.+.+.+.+..+
T Consensus 76 ~a~~i~~~v~-~~~~V~~A~vvv~~~------~a~Vav~~~~~-~-~~~~~i~~~V~~~v~~~~p 131 (177)
T PF09580_consen 76 LADRIANRVK-KVPGVEDATVVVTDD------NAYVAVDLDFN-R-FNTKKIKKKVEKAVKSADP 131 (177)
T ss_pred HHHHHHHHHh-cCCCceEEEEEEECC------EEEEEEEeccc-c-cchhHHHHHHHHHHHHhCC
Confidence 3467888888 899999999998864 44444444432 2 5677888888888766444
No 179
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=52.71 E-value=73 Score=31.11 Aligned_cols=68 Identities=15% Similarity=0.237 Sum_probs=52.6
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
.+..++.+. +++|....+....+-.-....++|...|.-+..+-|...+.+-..+++..++++++++.
T Consensus 97 ~l~~a~~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 97 MIEDAEKKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HHHHHHHcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344445555 78886555556777777788888899999988887877777788999999999999874
No 180
>PRK07798 acyl-CoA synthetase; Validated
Probab=52.21 E-value=84 Score=32.22 Aligned_cols=84 Identities=12% Similarity=-0.084 Sum_probs=60.4
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+. ...++..+|++....+-... .+..+++++..|+..+..+.....+.+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 106 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIE-YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVY 106 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEE
Confidence 467777655444333 34578889988776644322 23347888899999998887777889999999999999988
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.......+
T Consensus 107 ~~~~~~~~ 114 (533)
T PRK07798 107 EREFAPRV 114 (533)
T ss_pred chhhHHHH
Confidence 77655444
No 181
>PLN02574 4-coumarate--CoA ligase-like
Probab=52.14 E-value=53 Score=34.14 Aligned_cols=83 Identities=18% Similarity=0.103 Sum_probs=61.4
Q ss_pred ecCchhHHHHHHhh---cc-ccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 160 WTQLSPIRCAAEAW---GH-IDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 160 ~s~~~~~~~~~~~~---~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
+|...+........ .. .++.++|++....+-.. -.+..+++++..|+..+..++....+++...+++.++..++.
T Consensus 67 ~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~ 145 (560)
T PLN02574 67 ISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFT 145 (560)
T ss_pred ccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEE
Confidence 56776654443333 33 67889999988876543 233447899999999998887777889999999999999988
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.+..+..+
T Consensus 146 ~~~~~~~~ 153 (560)
T PLN02574 146 SPENVEKL 153 (560)
T ss_pred CHHHHHHH
Confidence 87766554
No 182
>PLN03013 cysteine synthase
Probab=51.43 E-value=84 Score=31.32 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=51.9
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
.+.....+. +++|....+....+-.-+.+.+++...|.-++.+-|...+.+....++..++++++++..
T Consensus 161 ~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 161 MVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 344444444 788866566667777777777788888988877777777888889999999999998753
No 183
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=51.12 E-value=54 Score=33.92 Aligned_cols=82 Identities=15% Similarity=0.094 Sum_probs=59.9
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+.. ..++.+++++...++-...+- ..+++++..|+..+.++.....+++...+++.++..++.
T Consensus 55 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~ 133 (546)
T PLN02330 55 AVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG-IVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVT 133 (546)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEE
Confidence 4778777655544433 457889999888776554322 347888999999888776667788999999999999887
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
.+..+.
T Consensus 134 ~~~~~~ 139 (546)
T PLN02330 134 NDTNYG 139 (546)
T ss_pred ccchhh
Confidence 665544
No 184
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.64 E-value=62 Score=33.75 Aligned_cols=84 Identities=11% Similarity=-0.032 Sum_probs=63.1
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++..+|++....+-... ....+++++..|+..+........+.+...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 367777755544443 34578899999887766543 33447889999999999888888899999999999999998
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77665443
No 185
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=50.25 E-value=1.6e+02 Score=25.70 Aligned_cols=86 Identities=15% Similarity=0.059 Sum_probs=50.2
Q ss_pred EEEecCCc--cchhhhHHH-HhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch---HH---HHHHHccCCCCCCC
Q 010344 183 VYCWPTNL--GWVMGPIIL-FSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP---SL---VKAWKNTNCLQGLD 253 (512)
Q Consensus 183 ~~~~~~p~--~~~~~~~~~-~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P---~~---~~~l~~~~~~~~~~ 253 (512)
+++...+. .|..|...+ ...-..|-.++....+..++++.+.+.+.+|.++..+- .. +..+++.......
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~- 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL- 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC-
Confidence 44444433 477777542 23335788887777677789999999999999865543 22 2222222211111
Q ss_pred cCceeEEEeecCCCCch
Q 010344 254 WTKIRSFASTGETSNVD 270 (512)
Q Consensus 254 l~~l~~i~~~G~~l~~~ 270 (512)
...+ .++.||..++++
T Consensus 163 ~~~~-~i~vGG~~~~~~ 178 (201)
T cd02070 163 RDKV-KVMVGGAPVNQE 178 (201)
T ss_pred CcCC-eEEEECCcCCHH
Confidence 0122 367888887754
No 186
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=50.20 E-value=1.1e+02 Score=32.81 Aligned_cols=85 Identities=5% Similarity=-0.209 Sum_probs=63.1
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+.. ..++.++|++...++-..- .....++++..|+..+.+.....++++...+++.++++++.
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~ 154 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ-WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFV 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEE
Confidence 3577776665544443 4588999998877765433 22347889999999998887888899999999999999998
Q ss_pred chHHHHHHH
Q 010344 236 VPSLVKAWK 244 (512)
Q Consensus 236 ~P~~~~~l~ 244 (512)
....+..++
T Consensus 155 ~~~~~~~~~ 163 (660)
T PLN02430 155 QDKKIKELL 163 (660)
T ss_pred CHHHHHHHH
Confidence 876554444
No 187
>PRK11761 cysM cysteine synthase B; Provisional
Probab=49.99 E-value=95 Score=29.23 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=48.7
Q ss_pred HHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 6 VANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 6 ~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
+...+.+. +.+|+.|.. ...+-.-..+.++|...|.-+..+-|...+.+....++..++++++++.
T Consensus 51 ~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 51 IVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34444444 677776654 5556666777778888999887777776667788899999999999985
No 188
>PRK09088 acyl-CoA synthetase; Validated
Probab=49.75 E-value=86 Score=31.78 Aligned_cols=92 Identities=11% Similarity=-0.013 Sum_probs=64.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.+++.....| ..+|...+...+.... ...++..++++....+-... .+..+++++..|+..+..+.
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCc
Confidence 3555665543333 2467777765554433 34578889998877765544 33347889999999998887
Q ss_pred CCchhhHHHHHHhcCceEEecch
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
...++.+...+++.+++.++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcc
Confidence 77788999999999999987755
No 189
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=49.51 E-value=98 Score=29.12 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=48.0
Q ss_pred HHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 6 VANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 6 ~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
+...+.+. +.+|+.| +....+-.-..+.+++.+.|.-+..+-|...+......++..++++++++..
T Consensus 45 l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 45 IWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 44444444 6777776 5555566666667777888998877777665566688899999999999863
No 190
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.40 E-value=61 Score=33.06 Aligned_cols=83 Identities=16% Similarity=0.008 Sum_probs=60.6
Q ss_pred ecCchhHHHHHHh---hccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 160 WTQLSPIRCAAEA---WGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 160 ~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
+|...+...+... ....++.+++++....+-+.. ....+++++..|+..+..+.......+...+++.+++.++..
T Consensus 12 ~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 12 VTYGELEARSNRLAHGLRALGLREGDVVAILLENNPE-FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 5566554444333 334578899998887765533 334488999999999998877777889999999999999888
Q ss_pred hHHHHHH
Q 010344 237 PSLVKAW 243 (512)
Q Consensus 237 P~~~~~l 243 (512)
+.....+
T Consensus 91 ~~~~~~~ 97 (502)
T PRK08276 91 AALADTA 97 (502)
T ss_pred cchhhHH
Confidence 7666544
No 191
>PRK07514 malonyl-CoA synthase; Validated
Probab=49.26 E-value=66 Score=32.78 Aligned_cols=84 Identities=12% Similarity=0.047 Sum_probs=61.8
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++.++|++....+-.. -....+++++..|+..+..+......++...+++.+++.++.
T Consensus 28 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 106 (504)
T PRK07514 28 RYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVC 106 (504)
T ss_pred EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEE
Confidence 567776655444333 3457889999887776553 233447889999999998887777889999999999999988
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.+.....+
T Consensus 107 ~~~~~~~~ 114 (504)
T PRK07514 107 DPANFAWL 114 (504)
T ss_pred ccchhHHH
Confidence 87665443
No 192
>PLN02614 long-chain acyl-CoA synthetase
Probab=49.05 E-value=78 Score=33.89 Aligned_cols=85 Identities=8% Similarity=-0.187 Sum_probs=64.2
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+. ...|+.++|++...++-+.- .....++++..|+..+.+.....++++...+++.++.+++.
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~ 157 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE-WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFV 157 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEE
Confidence 467777665554443 34588999998877765532 23347889999999999888888899999999999999998
Q ss_pred chHHHHHHH
Q 010344 236 VPSLVKAWK 244 (512)
Q Consensus 236 ~P~~~~~l~ 244 (512)
....+..+.
T Consensus 158 ~~~~~~~~~ 166 (666)
T PLN02614 158 EEKKISELF 166 (666)
T ss_pred CHHHHHHHH
Confidence 877665553
No 193
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=48.97 E-value=65 Score=32.88 Aligned_cols=84 Identities=11% Similarity=0.046 Sum_probs=61.5
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|.+.+...+.... ...++.+++++....+-+.. ....+++++..|+..+..+.....+.+...+++.+++.++.
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 103 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLE-TVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVT 103 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEE
Confidence 467777655443333 34577889998877765443 33447789999999998887778899999999999999988
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.+..+..+
T Consensus 104 ~~~~~~~~ 111 (515)
T TIGR03098 104 SSERLDLL 111 (515)
T ss_pred ccchhhhh
Confidence 77655443
No 194
>PRK07529 AMP-binding domain protein; Validated
Probab=48.80 E-value=86 Score=33.24 Aligned_cols=95 Identities=13% Similarity=0.092 Sum_probs=63.1
Q ss_pred CCCCeEEEEecC-CCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEec
Q 010344 138 PVDSVINILFSS-GTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYH 213 (512)
Q Consensus 138 ~~~~~~~i~~TS-GtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~ 213 (512)
.++.++.+.+.. +..+ +...+|...+...+.... ...++.++|++...+|-..-+ ...+++++..|. ++.+.
T Consensus 38 ~p~~~Al~~~~~~~~~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi~ 113 (632)
T PRK07529 38 HPDAPALSFLLDADPLD--RPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPIN 113 (632)
T ss_pred CCCCceEEeecccCCCC--CCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeCC
Confidence 445566665533 2222 334578877765554443 345889999998888765432 334667777774 45555
Q ss_pred CCCchhhHHHHHHhcCceEEecc
Q 010344 214 GSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 214 ~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
....++.+...+++.++.+++..
T Consensus 114 ~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 114 PLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CcCCHHHHHHHHHhcCCcEEEEe
Confidence 56678899999999999998875
No 195
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=48.28 E-value=74 Score=28.54 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=43.2
Q ss_pred hcc-CCCCCEEEEEcCCCH--HHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCcc
Q 010344 11 DTM-FSKGDAIAIDMPMTV--HAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAK 66 (512)
Q Consensus 11 ~~~-i~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 66 (512)
... ++++|++. .+|=.- .....+++++..|+..+.+ +.++++.+-+.+++.+++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERVT 227 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcCC
Confidence 444 89999999 888543 3445689999999998887 799999999999887753
No 196
>PRK10717 cysteine synthase A; Provisional
Probab=48.20 E-value=1e+02 Score=29.60 Aligned_cols=67 Identities=16% Similarity=0.144 Sum_probs=49.5
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
.+..++.+. +++|+.|.. ...+-.-..+.+++.+.|.-+..+-|...+......++..++++++++.
T Consensus 51 ~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~ 118 (330)
T PRK10717 51 IIWDAEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPA 118 (330)
T ss_pred HHHHHHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 344444444 677776544 6666677777788888898887776766677788899999999999885
No 197
>PRK08316 acyl-CoA synthetase; Validated
Probab=47.68 E-value=66 Score=32.89 Aligned_cols=85 Identities=13% Similarity=0.056 Sum_probs=62.6
Q ss_pred EEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 158 IPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
..+|...+...+.... ...++.+++++....+-... .+..+++++..|+..+.++.....+.+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 3467777655444333 33578899998887765543 3345789999999999888777788899999999999998
Q ss_pred cchHHHHHH
Q 010344 235 TVPSLVKAW 243 (512)
Q Consensus 235 ~~P~~~~~l 243 (512)
........+
T Consensus 114 ~~~~~~~~~ 122 (523)
T PRK08316 114 VDPALAPTA 122 (523)
T ss_pred EccchHHHH
Confidence 887766554
No 198
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=47.62 E-value=1e+02 Score=32.67 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=67.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.+|++.. +..+|. .-.+|.+.+...+..+. ...++.++|++...+|-..- ....+++++..|+..+.+.+
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCC
Confidence 3566666543 222232 23567777765544333 34588999999988766433 23347889999999988887
Q ss_pred CCchhhHHHHHHhcCceEEecch
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
...++.+...+++.++.+++...
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 88889999999999999988754
No 199
>PRK13391 acyl-CoA synthetase; Provisional
Probab=47.28 E-value=97 Score=31.69 Aligned_cols=97 Identities=16% Similarity=0.040 Sum_probs=67.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.++.+...+| + .+|...+...+..... ..++.+++++....+-... .+..+++++..|+..+..+.
T Consensus 10 ~p~~~a~~~~~~~-----~--~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~-~~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-----E--VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLR-YLEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-----C--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhccEEecccc
Confidence 4566666654432 2 3677776555444433 3478889998877665443 23347788999999998887
Q ss_pred CCchhhHHHHHHhcCceEEecchHHHHH
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVPSLVKA 242 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P~~~~~ 242 (512)
......+...+++.++..++..+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 7778899999999999999888766543
No 200
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=46.66 E-value=96 Score=31.98 Aligned_cols=79 Identities=13% Similarity=0.075 Sum_probs=57.5
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+........ ...++.+++++...++-... ....+++++..|+.++..+.....+++...+++.+++.++.
T Consensus 53 ~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 131 (538)
T TIGR03208 53 RFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWE-FTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVV 131 (538)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEE
Confidence 567777655444333 34578899998877765432 33447788999999888877777788999999999999887
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
.+.
T Consensus 132 ~~~ 134 (538)
T TIGR03208 132 PSV 134 (538)
T ss_pred ccc
Confidence 653
No 201
>PLN02479 acetate-CoA ligase
Probab=46.35 E-value=91 Score=32.48 Aligned_cols=82 Identities=9% Similarity=-0.065 Sum_probs=61.3
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+........ ...++.++|++....+-... ....+++++..|+..+.++.....+++...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPA-MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 467776655544443 34588999999887775432 23347789999999999888778899999999999999998
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
.+.++.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 776643
No 202
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=45.74 E-value=1.2e+02 Score=28.59 Aligned_cols=67 Identities=19% Similarity=0.237 Sum_probs=48.5
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
.+...+.+. +.+|+.| +....+-.-..+.+++...|.-+..+-|...+..-...++..++++++++.
T Consensus 45 ~~~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 112 (299)
T TIGR01136 45 MIEDAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPA 112 (299)
T ss_pred HHHHHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 344444444 6777766 456666666677778888898887777766666677889999999999875
No 203
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=45.37 E-value=77 Score=37.38 Aligned_cols=99 Identities=12% Similarity=0.021 Sum_probs=66.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.++++...+...+......+|++.+...+..... ..++.+++++...++-+..+ ...+++++..|+..+.+++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 4566776543221101111235788877665554443 34788999988877665332 3448899999999999887
Q ss_pred CCchhhHHHHHHhcCceEEecch
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
...++++...+++.++..++...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 77788888999999998877643
No 204
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=45.34 E-value=97 Score=30.82 Aligned_cols=67 Identities=16% Similarity=0.073 Sum_probs=49.3
Q ss_pred HHHHHhcc-CCCCCEEEEEcCCCH--HHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 6 VANALDTM-FSKGDAIAIDMPMTV--HAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 6 ~a~~L~~~-i~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
+++.+... +++||++....+.+. ..+...++....|+..+++++.. .+.+...++..++++++....
T Consensus 107 ~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~~~Ps 176 (422)
T TIGR02155 107 VARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIMVTPS 176 (422)
T ss_pred HHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEEEcHH
Confidence 34455556 899999887665442 22334667888999999887654 577889999999999988874
No 205
>PRK05850 acyl-CoA synthetase; Validated
Probab=44.33 E-value=1.8e+02 Score=30.26 Aligned_cols=84 Identities=13% Similarity=0.058 Sum_probs=59.0
Q ss_pred EEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC---CchhhHHHHHHhcCce
Q 010344 158 IPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS---PLERSFGKFVQDSGVS 231 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~~t 231 (512)
..+|+..+...+..+.. ..+ .++|++...++-.. -....+++++..|+.++..+.. ...+.+...+++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 45788777554444333 335 57899888777553 2334478889999999988642 2457888999999999
Q ss_pred EEecchHHHHHH
Q 010344 232 VLGTVPSLVKAW 243 (512)
Q Consensus 232 ~l~~~P~~~~~l 243 (512)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999988766554
No 206
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=44.12 E-value=1e+02 Score=32.43 Aligned_cols=84 Identities=14% Similarity=-0.032 Sum_probs=61.9
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++.+++++....+-...+ ...+++++..|+..+..+.....+.+...+++.+++.++.
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 140 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIV 140 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 367777765544433 345788999988877655432 3457889999999998887777788999999999999988
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.......+
T Consensus 141 ~~~~~~~~ 148 (600)
T PRK08279 141 GEELVEAF 148 (600)
T ss_pred ChHHHHHH
Confidence 77665543
No 207
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=44.08 E-value=29 Score=31.35 Aligned_cols=71 Identities=25% Similarity=0.237 Sum_probs=56.8
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcC--HHHHHHHHHh-cCccEEEeccc
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFA--AREIATRLRV-SKAKGIFTQDF 73 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~-~~~~~iv~~~~ 73 (512)
++.+-..+.+. .-||.-=.+.||.+..+++..-++.-++.+-+|++|+++ .+.+..+++. +.+|+++..+.
T Consensus 95 sDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSP 169 (375)
T KOG0633|consen 95 SDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSP 169 (375)
T ss_pred cHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCC
Confidence 34556667777 889966678899999999999999999999999999874 4677777765 48998887763
No 208
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.01 E-value=1.2e+02 Score=31.35 Aligned_cols=93 Identities=19% Similarity=0.109 Sum_probs=66.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG 214 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 214 (512)
.++.++.+...-+. .+|++.+...+..... ..++.++|++...++-+.- .+..+++++..|+..+.+.+
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e-~~~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPE-FLIAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeecCc
Confidence 34555666543332 7788887766655543 3357789998877765533 22347888899999999987
Q ss_pred CCchhhHHHHHHhcCceEEecchH
Q 010344 215 SPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 215 ~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
...+.++...++..++..++....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 777888888999999988888765
No 209
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.68 E-value=97 Score=31.57 Aligned_cols=82 Identities=10% Similarity=-0.051 Sum_probs=60.3
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++.+++++....+-... ....+++++..|+..+..+.......+.+.+++.++..++.
T Consensus 30 ~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 108 (513)
T PRK07656 30 RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPH-WVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFV 108 (513)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH-HHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEE
Confidence 367777655443333 34578889998877765432 33447788999999998887777889999999999999988
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
.+....
T Consensus 109 ~~~~~~ 114 (513)
T PRK07656 109 LGLFLG 114 (513)
T ss_pred chhhHH
Confidence 776544
No 210
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=43.48 E-value=1.5e+02 Score=27.86 Aligned_cols=67 Identities=15% Similarity=0.192 Sum_probs=48.8
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
.+...+.+. +.+|+.|+. ...+-.-..+.++|...|.-+..+-|...+..-...++..++++++++.
T Consensus 46 ~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 46 MIVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 344444444 677776655 5666666777778888899887777776667777889999999998875
No 211
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.91 E-value=70 Score=33.28 Aligned_cols=82 Identities=16% Similarity=0.124 Sum_probs=61.1
Q ss_pred EecCchhHHHHHHhhcc----ccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 159 PWTQLSPIRCAAEAWGH----IDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
.+|...+...+..+... .++.++|++...++-... ....+++++..|+..+..+.....+++...+++.++..++
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~-~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii 127 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQ-YPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALV 127 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEE
Confidence 46888776655554432 378899999887766443 2334778999999999988777788999999999999998
Q ss_pred cchHHHH
Q 010344 235 TVPSLVK 241 (512)
Q Consensus 235 ~~P~~~~ 241 (512)
.......
T Consensus 128 ~~~~~~~ 134 (562)
T PRK05677 128 CLANMAH 134 (562)
T ss_pred Eecchhh
Confidence 7665443
No 212
>PRK13382 acyl-CoA synthetase; Provisional
Probab=42.85 E-value=1e+02 Score=31.83 Aligned_cols=82 Identities=12% Similarity=-0.065 Sum_probs=60.2
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+.. ..++.+++++...++-+.. .+..+++.+..|+..+..+......++...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 4677666554444333 4578899999887765443 33458889999999999887777789999999999999887
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 655443
No 213
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=41.61 E-value=1.3e+02 Score=30.35 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=46.3
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHH--HHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVH--AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
..++.+... +.+||++.+..+-+.. .....+++..+|+..+|... ......++++.++.+++...
T Consensus 117 ~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~~~p 184 (445)
T TIGR03335 117 KYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIVASV 184 (445)
T ss_pred HHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEEECH
Confidence 344556666 9999999998875542 23456788899998877643 23456788999999887765
No 214
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=41.14 E-value=89 Score=31.01 Aligned_cols=65 Identities=17% Similarity=0.129 Sum_probs=51.4
Q ss_pred hccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchH
Q 010344 173 WGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPS 238 (512)
Q Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~ 238 (512)
....++..+|++...++-... ....+++.+..|+..+.++.....+.+...+++.++..++..+.
T Consensus 16 l~~~g~~~gd~v~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 16 LKAQGIRSGSRVALVGQNSIE-MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 334678899999887776632 33458899999999999887777888999999999998877654
No 215
>PRK13390 acyl-CoA synthetase; Provisional
Probab=40.71 E-value=1.2e+02 Score=30.97 Aligned_cols=79 Identities=16% Similarity=0.118 Sum_probs=58.3
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+.. ..++.++|++....+-+.. .+..+++.+..|+..+.+.....++.+...+++.++..+..
T Consensus 24 ~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~-~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~ 102 (501)
T PRK13390 24 QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPE-ALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVA 102 (501)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEE
Confidence 4788877665554443 4578899998877665443 23447889999999988887777888889999999888876
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
...
T Consensus 103 ~~~ 105 (501)
T PRK13390 103 SAA 105 (501)
T ss_pred cch
Confidence 543
No 216
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=40.70 E-value=1.4e+02 Score=30.12 Aligned_cols=67 Identities=16% Similarity=0.171 Sum_probs=50.4
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
.+..++.+. +.+|+.|.- ...+-.-..+.++|.+.|.-+..+-|...+.+-...++..++++++++.
T Consensus 49 ~l~~a~~~g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 49 MIEDAEASGRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HHHHHHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 344555555 678877544 4667777778888889999887777766667778889999999999875
No 217
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=40.38 E-value=82 Score=32.67 Aligned_cols=83 Identities=18% Similarity=0.126 Sum_probs=61.3
Q ss_pred EecCchhHHHHHHhhc----cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 159 PWTQLSPIRCAAEAWG----HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
.+|+..+......... ..++.+++++...++-... ....+++++..|+..+.+++....+++...+++.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 3677777655544443 3578899998887766533 2234788899999999888777788999999999999998
Q ss_pred cchHHHHH
Q 010344 235 TVPSLVKA 242 (512)
Q Consensus 235 ~~P~~~~~ 242 (512)
........
T Consensus 129 ~~~~~~~~ 136 (560)
T PRK08751 129 VIDNFGTT 136 (560)
T ss_pred EcchhHHH
Confidence 87655443
No 218
>PLN00011 cysteine synthase
Probab=40.25 E-value=1.6e+02 Score=28.04 Aligned_cols=67 Identities=18% Similarity=0.138 Sum_probs=49.7
Q ss_pred HHHHHhcc-CCCC-CEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 6 VANALDTM-FSKG-DAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 6 ~a~~L~~~-i~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
+..++.+. +.+| +.|+ ....+-.-....+++..+|.-+..+-|...+.....+++..++++++++..
T Consensus 56 l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 56 IKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 44444444 7777 5554 466677777778888889998877767666678888999999999998863
No 219
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=40.18 E-value=84 Score=32.69 Aligned_cols=79 Identities=11% Similarity=-0.098 Sum_probs=59.1
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+.. ..++.++|++...++-... ....+++++..|+..+.++.....+++...+++.+++.++.
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~-~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDL-YLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 4677776655544433 4588999999887765433 22347888999999999887778899999999999999887
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 653
No 220
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=39.99 E-value=1.7e+02 Score=29.31 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=32.3
Q ss_pred CCCCCEEEEEcCCCHHHHHHHH--HHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYL--AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~l--A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
+++||.|.+- ++.......++ .+.+.|+.+..++...+.+++...++. +.++|+...
T Consensus 97 l~~GD~VI~~-~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~ 155 (432)
T PRK06702 97 CSSGDHLLCS-STVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAES 155 (432)
T ss_pred cCCCCEEEEC-CCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEc
Confidence 6777776553 33333222222 245667777777666666667776654 556666543
No 221
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=39.61 E-value=3.1e+02 Score=26.22 Aligned_cols=63 Identities=17% Similarity=0.138 Sum_probs=52.0
Q ss_pred hcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 11 DTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 11 ~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
++- |++|..+.|=--.+---+...+.|..-|+-++..=|..-+.|-..+|+..++++|.++.+
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 444 899988888777777777777777888998888878887888899999999999999975
No 222
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=39.55 E-value=93 Score=23.53 Aligned_cols=40 Identities=13% Similarity=-0.045 Sum_probs=31.8
Q ss_pred HHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcce
Q 010344 4 RLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYV 43 (512)
Q Consensus 4 ~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 43 (512)
+.|...+... +.+++.|.++|.++.....+...+..+|.-
T Consensus 52 ~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 52 EEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred HHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4566666666 778999999999998877777888888874
No 223
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=39.38 E-value=2.5e+02 Score=29.56 Aligned_cols=101 Identities=14% Similarity=0.032 Sum_probs=65.3
Q ss_pred CCCeEEEEec--CCCCCCCceEEecCchhHHHHHHhhccc--cccCCcEEEecCCccchhhhHHHHhhhccCceEEEe-c
Q 010344 139 VDSVINILFS--SGTTGEPKAIPWTQLSPIRCAAEAWGHI--DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALY-H 213 (512)
Q Consensus 139 ~~~~~~i~~T--SGtTG~pK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~-~ 213 (512)
++.++++... .+++|. ...+|...+...+..+...+ .+.++|++...++-... .+..+++++..|+..+.+ +
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEecCC
Confidence 4556655432 112332 23578877766554444322 26889999888776643 334478899999988866 3
Q ss_pred CCCc--hhhHHHHHHhcCceEEecchHHHHH
Q 010344 214 GSPL--ERSFGKFVQDSGVSVLGTVPSLVKA 242 (512)
Q Consensus 214 ~~~~--~~~~~~~l~~~~~t~l~~~P~~~~~ 242 (512)
.... ++++...+++.++..++..+..+..
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 3332 5788899999999999988766544
No 224
>PRK07470 acyl-CoA synthetase; Validated
Probab=39.30 E-value=1.3e+02 Score=30.98 Aligned_cols=82 Identities=12% Similarity=0.027 Sum_probs=59.2
Q ss_pred EecCchhHHHHHHh---hccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEA---WGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+... ....++..++++....+-... ....+++++..|+..+..+.....+.+...+++.+++.++.
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 110 (528)
T PRK07470 32 SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQ-MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMIC 110 (528)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEE
Confidence 46777665444333 334578899998876655432 22347889999999998887777889999999999999988
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
.+.+..
T Consensus 111 ~~~~~~ 116 (528)
T PRK07470 111 HADFPE 116 (528)
T ss_pred cchhHH
Confidence 776543
No 225
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=38.32 E-value=95 Score=30.41 Aligned_cols=61 Identities=18% Similarity=0.178 Sum_probs=33.4
Q ss_pred HHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCC-----cCHHHHHHHHHhcCccEEEe
Q 010344 6 VANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFT 70 (512)
Q Consensus 6 ~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~iv~ 70 (512)
+...++.. +++||.|.+-.+. |.....++...|+.++.++.+ .+.+.+...++. +.++|+.
T Consensus 59 L~~~l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 59 LEMAALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHHHHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 33344445 7788877765443 333344555667776665432 345556665543 4555553
No 226
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=38.31 E-value=1.9e+02 Score=27.05 Aligned_cols=59 Identities=17% Similarity=0.166 Sum_probs=44.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
.++|+.|+. ...+-.-....++|.+.|.-+..+-|...+......++..++++++++..
T Consensus 50 ~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 50 LKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred CCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 445666544 66677777778888889998877767666667778899999999999864
No 227
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.01 E-value=1.8e+02 Score=30.35 Aligned_cols=85 Identities=12% Similarity=-0.042 Sum_probs=62.2
Q ss_pred EEecCchhHHHHHHhhc----cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEE
Q 010344 158 IPWTQLSPIRCAAEAWG----HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVL 233 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l 233 (512)
-.+|...+...+..... ..++.++|++...++-..-. ...+++.+..|+..+.++.....+.+...++..++..+
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEH-LEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVI 115 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHH-HHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEE
Confidence 35677776555444433 25788899988777654432 34478889999999988877778899999999999999
Q ss_pred ecchHHHHHH
Q 010344 234 GTVPSLVKAW 243 (512)
Q Consensus 234 ~~~P~~~~~l 243 (512)
+..+.....+
T Consensus 116 i~~~~~~~~~ 125 (576)
T PRK05620 116 VADPRLAEQL 125 (576)
T ss_pred EEChhhHHHH
Confidence 9887665544
No 228
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=37.49 E-value=1.4e+02 Score=20.65 Aligned_cols=48 Identities=10% Similarity=0.144 Sum_probs=34.7
Q ss_pred cchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHH
Q 010344 406 TSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAI 466 (512)
Q Consensus 406 v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~ 466 (512)
-...++.+.|. .+|.|.++..+... ....+.+.. .+.+++.+.+.+.+
T Consensus 10 ~~~~~~~~~l~-~~p~V~~~~~vtG~------~d~~~~v~~------~d~~~l~~~i~~~l 57 (74)
T PF01037_consen 10 DAYDEFAEALA-EIPEVVECYSVTGE------YDLILKVRA------RDMEELEEFIREKL 57 (74)
T ss_dssp THHHHHHHHHH-TSTTEEEEEEESSS------SSEEEEEEE------SSHHHHHHHHHHTH
T ss_pred chHHHHHHHHH-cCCCEEEEEEEeCC------CCEEEEEEE------CCHHHHHHHHHHHh
Confidence 45678899998 89999999877543 355566665 46677777777655
No 229
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=37.17 E-value=1.2e+02 Score=30.97 Aligned_cols=83 Identities=14% Similarity=0.071 Sum_probs=60.5
Q ss_pred ecCchhHHHHH---HhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 160 WTQLSPIRCAA---EAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 160 ~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
+|...+...+. ......++.+++++....+-... ....+++++..|+..+..+.....+.+...+++.+++.++..
T Consensus 12 ~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~ 90 (509)
T PRK12406 12 RSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAH 90 (509)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEc
Confidence 45555544433 33334578899998877766543 234477888999999988877788899999999999999987
Q ss_pred hHHHHHH
Q 010344 237 PSLVKAW 243 (512)
Q Consensus 237 P~~~~~l 243 (512)
......+
T Consensus 91 ~~~~~~~ 97 (509)
T PRK12406 91 ADLLHGL 97 (509)
T ss_pred cchhhhh
Confidence 7666544
No 230
>PRK08162 acyl-CoA synthetase; Validated
Probab=36.70 E-value=1.1e+02 Score=31.46 Aligned_cols=84 Identities=12% Similarity=-0.062 Sum_probs=63.1
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..... ..++..+|++....+-... ....+++.+..|+..+..+.....+.+...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 4788777665554443 3478899999887766543 22347788899999988887778899999999999999998
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87765543
No 231
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=36.67 E-value=1.1e+02 Score=29.84 Aligned_cols=53 Identities=19% Similarity=0.221 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCC-----cCHHHHHHHHHhcCccEEEe
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFT 70 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~iv~ 70 (512)
+++||.|.+-.+.... ..-++...|+.++.++.+ .+.+++...++. ++++|+.
T Consensus 68 ~~~Gd~Viv~~~t~~~---~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 68 IQPGDEVIMPSYTFVS---TANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred CCCCCEEEECCCCcHH---HHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 6777776665544333 234455566666555422 345666665544 4555543
No 232
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=36.55 E-value=1.3e+02 Score=23.44 Aligned_cols=47 Identities=11% Similarity=0.129 Sum_probs=34.6
Q ss_pred ccchhhhHHHHhhhcc-CceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 190 LGWVMGPIILFSSFLS-GAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 190 ~~~~~~~~~~~~~l~~-G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
..|..|+..+...+-. |..+.+.+.....+++.+.+++.+++.+..+
T Consensus 11 ~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS 58 (121)
T PF02310_consen 11 EVHPLGLLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGIS 58 (121)
T ss_dssp SSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEE
T ss_pred cchhHHHHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 3466777665555544 8888888777677899999999999987553
No 233
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=36.52 E-value=1.3e+02 Score=26.77 Aligned_cols=80 Identities=10% Similarity=-0.004 Sum_probs=51.1
Q ss_pred cchhhhHH-HHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHH------HHHHHccCCCCCCCcCceeEEEee
Q 010344 191 GWVMGPII-LFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSL------VKAWKNTNCLQGLDWTKIRSFAST 263 (512)
Q Consensus 191 ~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~------~~~l~~~~~~~~~~l~~l~~i~~~ 263 (512)
.|..|... ...--..|-.++....+..++++.+.+.+.+|.++.++-.+ ++.+++.....+. .++ ++.|
T Consensus 100 ~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~---~~~-i~vG 175 (213)
T cd02069 100 VHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGI---KIP-LLIG 175 (213)
T ss_pred hhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCC---CCe-EEEE
Confidence 37777644 33333578888888878888999999999999987655322 2222222211111 333 6788
Q ss_pred cCCCCchhhHH
Q 010344 264 GETSNVDDDLW 274 (512)
Q Consensus 264 G~~l~~~~~~~ 274 (512)
|.+++++..+.
T Consensus 176 G~~~~~~~~~~ 186 (213)
T cd02069 176 GAATSRKHTAV 186 (213)
T ss_pred ChhcCHHHHhh
Confidence 88888776654
No 234
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=36.38 E-value=1.6e+02 Score=27.39 Aligned_cols=61 Identities=15% Similarity=0.193 Sum_probs=44.4
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEe-ecCCCcCHHHHHHHHHhcCccEEEeccch
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVV-SIADSFAAREIATRLRVSKAKGIFTQDFI 74 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v-~l~~~~~~~~l~~~l~~~~~~~iv~~~~~ 74 (512)
+++||.|.=-..||.---+..-=|-..|.--+ .+-..-..+++...|+..+++.||++++.
T Consensus 158 L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel 219 (354)
T KOG0025|consen 158 LNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL 219 (354)
T ss_pred cCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh
Confidence 89999999888888644433333333354433 34456678999999999999999999864
No 235
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=36.21 E-value=1.3e+02 Score=31.22 Aligned_cols=82 Identities=10% Similarity=-0.000 Sum_probs=61.0
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+.. ..++.++|++...++-... ....+++++..|+..+.++.....+++...+++.+++.++.
T Consensus 48 ~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~ 126 (557)
T PRK07059 48 AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQ-YPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVV 126 (557)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEE
Confidence 5788877655544433 3578899998877665433 22346889999999998887777889999999999999988
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
...+..
T Consensus 127 ~~~~~~ 132 (557)
T PRK07059 127 LENFAT 132 (557)
T ss_pred chhhHH
Confidence 766543
No 236
>PRK06178 acyl-CoA synthetase; Validated
Probab=36.08 E-value=1.4e+02 Score=30.94 Aligned_cols=85 Identities=15% Similarity=-0.012 Sum_probs=63.0
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..... ..++.+++++....+-... ....+++++..|+..+..++......+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 4677776555444332 4578899998877766553 23447888899999988887777789999999999999999
Q ss_pred chHHHHHHH
Q 010344 236 VPSLVKAWK 244 (512)
Q Consensus 236 ~P~~~~~l~ 244 (512)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887766543
No 237
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=35.42 E-value=1.5e+02 Score=29.90 Aligned_cols=82 Identities=15% Similarity=0.044 Sum_probs=60.4
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|+..+...+.... ...++.+++++....+-... ....+++.+..|+..+.++.....+.+...+++.++..++.
T Consensus 27 ~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~ 105 (483)
T PRK03640 27 KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGME-MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLIT 105 (483)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEE
Confidence 467777765544443 34577899998887776544 24458899999999999987778888999999999998877
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
......
T Consensus 106 ~~~~~~ 111 (483)
T PRK03640 106 DDDFEA 111 (483)
T ss_pred cchhhH
Confidence 654443
No 238
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=35.27 E-value=91 Score=32.41 Aligned_cols=80 Identities=18% Similarity=0.101 Sum_probs=58.8
Q ss_pred EecCchhHHHHHHhhcc----ccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 159 PWTQLSPIRCAAEAWGH----IDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
.+|...+.......... .++.++|++...++-... ....+++++..|+..+.+......+++...+++.++..++
T Consensus 49 ~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i 127 (562)
T PRK12492 49 TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALV 127 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEE
Confidence 56777776555444432 378899998877665443 3344778899999998887777788999999999999988
Q ss_pred cchHH
Q 010344 235 TVPSL 239 (512)
Q Consensus 235 ~~P~~ 239 (512)
..+.+
T Consensus 128 ~~~~~ 132 (562)
T PRK12492 128 YLNMF 132 (562)
T ss_pred ecccc
Confidence 76543
No 239
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=35.26 E-value=1.3e+02 Score=28.71 Aligned_cols=56 Identities=9% Similarity=-0.009 Sum_probs=43.5
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 17 GDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 17 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
++.|... ..+-.-....++|...|.-++.+-|...+......++..++++++++..
T Consensus 51 ~~~vv~a-SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 51 CVHVVCS-SGGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred CCeEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 4555444 4566667777888899999888878777788889999999999998763
No 240
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=34.88 E-value=2.1e+02 Score=23.96 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=34.5
Q ss_pred hHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHh
Q 010344 408 SVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQR 468 (512)
Q Consensus 408 ~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~ 468 (512)
...|.+.+. +.|+|.++.++...+ ..++.|.++.+......++++..+.+.+++
T Consensus 56 A~~Ia~~v~-~v~~V~dA~vvVtg~------~A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 56 ADEIASEAA-KVKGVKDATVVITGN------YAYVGVDLTNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHHh-cCCCCceEEEEEECC------EEEEEEEcCCCcchhhHHHHHHHHHHHHHh
Confidence 356777787 899999999998875 333334444433213346677777666654
No 241
>PRK12582 acyl-CoA synthetase; Provisional
Probab=34.81 E-value=1.2e+02 Score=32.20 Aligned_cols=79 Identities=8% Similarity=-0.019 Sum_probs=56.0
Q ss_pred EEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCc-----hhhHHHHHHhcC
Q 010344 158 IPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPL-----ERSFGKFVQDSG 229 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~-----~~~~~~~l~~~~ 229 (512)
-.+|...+...+..... ..++.++|++...++-. .-....+++++..|+..+.++.... .+++...+++.+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 35788777665554443 45788999998877743 3333457889999999888765443 268888899999
Q ss_pred ceEEecch
Q 010344 230 VSVLGTVP 237 (512)
Q Consensus 230 ~t~l~~~P 237 (512)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 98887653
No 242
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=34.62 E-value=2.8e+02 Score=27.47 Aligned_cols=78 Identities=13% Similarity=0.036 Sum_probs=43.7
Q ss_pred CCCCCEEEEEcCCCHHHHH----HHH-----HHHHhcceEeecCC---CcCHHHHHHHHHhcCccEEEeccchhccCccc
Q 010344 14 FSKGDAIAIDMPMTVHAVI----IYL-----AIILAGYVVVSIAD---SFAAREIATRLRVSKAKGIFTQDFILRGGRKF 81 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~----~~l-----A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~ 81 (512)
+++||+|..+-..+=.++. .-. .-...-.+..++++ ...-+++..+++..+|++|++....+...-..
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~ 186 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDF 186 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---H
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCH
Confidence 8999999888766533321 111 22333456667773 34678999999999999999998766544444
Q ss_pred cchhhHHhcC
Q 010344 82 PLYSKVAEAG 91 (512)
Q Consensus 82 ~~~~~~~~~~ 91 (512)
..+.++.+..
T Consensus 187 ~~~reIad~v 196 (399)
T PF00464_consen 187 KRFREIADEV 196 (399)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 5555555554
No 243
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=34.58 E-value=1.8e+02 Score=29.70 Aligned_cols=84 Identities=11% Similarity=0.010 Sum_probs=59.1
Q ss_pred EecCchhHHHHHHh---hccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEA---WGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+... ....++..++++....+-.. -.+..+++++..|+..+..+.....+.+...+++.+++.++.
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~ 108 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGV-DFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFV 108 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEE
Confidence 35666665443333 23457888998876654432 222347889999999998887778899999999999999988
Q ss_pred chHHHHHH
Q 010344 236 VPSLVKAW 243 (512)
Q Consensus 236 ~P~~~~~l 243 (512)
.......+
T Consensus 109 ~~~~~~~~ 116 (508)
T TIGR02262 109 SGELLPVI 116 (508)
T ss_pred chhhHHHH
Confidence 77655443
No 244
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=34.14 E-value=1.3e+02 Score=24.54 Aligned_cols=43 Identities=19% Similarity=0.030 Sum_probs=34.3
Q ss_pred HHHHHHHHhcc-CCCCCEEEEEcCC---CHHHHHHHHHHHHhcceEe
Q 010344 3 YRLVANALDTM-FSKGDAIAIDMPM---TVHAVIIYLAIILAGYVVV 45 (512)
Q Consensus 3 ~~~~a~~L~~~-i~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~~v 45 (512)
.+.|++.|.+. |.+++.|.+++.. +.....+++++-.+|.--+
T Consensus 80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 35788899999 9999999999975 5666677788888886644
No 245
>PRK06381 threonine synthase; Validated
Probab=33.98 E-value=1.3e+02 Score=28.68 Aligned_cols=60 Identities=12% Similarity=-0.066 Sum_probs=45.2
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
.+.|....+....+-.-..+.++|...|.-+..+-|...+......++..++++++++..
T Consensus 59 ~~~g~~~lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~ 118 (319)
T PRK06381 59 MRLGYSGITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK 118 (319)
T ss_pred HHcCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 444544445566777777888888899998877666666666677899999999999864
No 246
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=33.23 E-value=1.8e+02 Score=28.49 Aligned_cols=65 Identities=18% Similarity=0.192 Sum_probs=47.5
Q ss_pred HHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCC-----cCHHHHHHHHHhcCccEEEecc
Q 010344 4 RLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 4 ~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
.++.-+|+.. |++||-|.+ .+.-|+...=+++..|+.+|.+|-+ .+.+.+...+... .|+|+.-.
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVh 130 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVH 130 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEeh
Confidence 3455566766 999996544 3566788888899999999887643 5778888888875 67776654
No 247
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=33.18 E-value=4.5e+02 Score=25.27 Aligned_cols=55 Identities=15% Similarity=0.198 Sum_probs=25.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecC--C--CcCHHHHHHHHHhcCccEEEec
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIA--D--SFAAREIATRLRVSKAKGIFTQ 71 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~--~~~~~~l~~~l~~~~~~~iv~~ 71 (512)
+.+||.|++-.|.-.. ...++...|+.+++++ + ..+.+.+...+...++++++..
T Consensus 102 ~~~gd~vlv~~P~y~~---~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 102 AKPGATVLAPEPGFVM---YRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred cCCCCEEEECCCCHHH---HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEc
Confidence 5566666655543322 2233444555444432 1 2334555555554455555443
No 248
>PLN02356 phosphateglycerate kinase
Probab=32.93 E-value=1.7e+02 Score=29.19 Aligned_cols=58 Identities=12% Similarity=-0.017 Sum_probs=42.4
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
+++|..|. ....+-.-....++|...|.-++.+-|...+.+-..+++..++++++++.
T Consensus 101 ~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 101 LFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred cCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 54665544 44555556777778888888887776776667778899999999998853
No 249
>PRK06164 acyl-CoA synthetase; Validated
Probab=32.70 E-value=1.3e+02 Score=30.88 Aligned_cols=79 Identities=9% Similarity=-0.002 Sum_probs=58.4
Q ss_pred EecCchhHHHHHHh---hccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEA---WGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+... ....++.+++++....+-+.. ....+++++..|+..+..+.....+.+...+++.+++.++.
T Consensus 35 ~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~ 113 (540)
T PRK06164 35 PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIE-WVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVV 113 (540)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHH-HHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEE
Confidence 46777765444333 334578899999877766543 23347888999999999887777889999999999999987
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
.+.
T Consensus 114 ~~~ 116 (540)
T PRK06164 114 WPG 116 (540)
T ss_pred ccc
Confidence 654
No 250
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=32.53 E-value=1.7e+02 Score=26.52 Aligned_cols=56 Identities=13% Similarity=0.015 Sum_probs=41.8
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 17 GDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 17 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
++.|.. ...+-.-..+.++|...|..++.+-|...+.....+++..+++++.++..
T Consensus 50 ~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 50 KGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred CCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 444444 44456666677777778988877777777788888899999999988864
No 251
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=32.50 E-value=1.7e+02 Score=31.54 Aligned_cols=87 Identities=7% Similarity=-0.049 Sum_probs=64.0
Q ss_pred eEEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEE
Q 010344 157 AIPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVL 233 (512)
Q Consensus 157 ~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l 233 (512)
...+|...+...+..+.. ..++.++|++...++-..- .....++++..|+..+.......++++...+++.++..+
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 197 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWE-WLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAI 197 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEE
Confidence 456788777665554443 4588999998877765432 223477888999988887767778899999999999999
Q ss_pred ecchHHHHHHH
Q 010344 234 GTVPSLVKAWK 244 (512)
Q Consensus 234 ~~~P~~~~~l~ 244 (512)
++....+..+.
T Consensus 198 v~~~~~~~~l~ 208 (700)
T PTZ00216 198 VCNGKNVPNLL 208 (700)
T ss_pred EECHHHHHHHH
Confidence 98877665554
No 252
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=32.49 E-value=1.2e+02 Score=31.23 Aligned_cols=77 Identities=13% Similarity=-0.037 Sum_probs=56.7
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++.++|++....|-.. -....+++++..|+..+..+.....+++...++..++.+++.
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 127 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFA 127 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEE
Confidence 467777655544333 3458889999987765543 233457899999999998887777788999999999998876
Q ss_pred c
Q 010344 236 V 236 (512)
Q Consensus 236 ~ 236 (512)
.
T Consensus 128 ~ 128 (547)
T PRK06087 128 P 128 (547)
T ss_pred e
Confidence 4
No 253
>PRK07867 acyl-CoA synthetase; Validated
Probab=32.35 E-value=1.9e+02 Score=29.72 Aligned_cols=82 Identities=11% Similarity=-0.064 Sum_probs=59.5
Q ss_pred EecCchhHHHHHHhhccc----cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 159 PWTQLSPIRCAAEAWGHI----DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
.+|...+...+..+...+ +..+++++....+-.. -....+++++..|+.++.++....++++...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 467777766555444332 4567787776665432 23334789999999999988788889999999999999999
Q ss_pred cchHHHH
Q 010344 235 TVPSLVK 241 (512)
Q Consensus 235 ~~P~~~~ 241 (512)
.......
T Consensus 107 ~~~~~~~ 113 (529)
T PRK07867 107 TESAHAE 113 (529)
T ss_pred ECHhHHH
Confidence 8876654
No 254
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.98 E-value=1.6e+02 Score=30.48 Aligned_cols=82 Identities=12% Similarity=-0.011 Sum_probs=59.5
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+........ ...++.++|++...++-... ....+++++..|+..+.......++++...+++.++..++.
T Consensus 39 ~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 117 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYR-HLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLF 117 (539)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEE
Confidence 367777755544433 34578899998887765532 22336788889999998887777888999999999999887
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
.+.+..
T Consensus 118 ~~~~~~ 123 (539)
T PRK07008 118 DLTFLP 123 (539)
T ss_pred cchhHH
Confidence 776543
No 255
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=31.82 E-value=1.3e+02 Score=30.98 Aligned_cols=83 Identities=13% Similarity=-0.021 Sum_probs=60.3
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+......... ..++.++|++...++-....- ..+++.+..|+..+.++.....+.+...+++.++..++.
T Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~ 117 (542)
T PRK06018 39 RTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHL-EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVIT 117 (542)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH-HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEE
Confidence 4677777655544443 457889999887766544322 236788889999998887777899999999999999987
Q ss_pred chHHHHH
Q 010344 236 VPSLVKA 242 (512)
Q Consensus 236 ~P~~~~~ 242 (512)
...+...
T Consensus 118 ~~~~~~~ 124 (542)
T PRK06018 118 DLTFVPI 124 (542)
T ss_pred ccccHHH
Confidence 7654433
No 256
>PRK12583 acyl-CoA synthetase; Provisional
Probab=31.57 E-value=1.4e+02 Score=30.78 Aligned_cols=79 Identities=13% Similarity=-0.048 Sum_probs=59.2
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++.+++++....+-... ....+++++..|+..+........+++...+++.+++.++.
T Consensus 45 ~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 123 (558)
T PRK12583 45 RYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAE-WLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVIC 123 (558)
T ss_pred EecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH-HHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 467877755544433 34578889998877655432 33448899999999999888888899999999999999887
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
.+.
T Consensus 124 ~~~ 126 (558)
T PRK12583 124 ADA 126 (558)
T ss_pred ecc
Confidence 663
No 257
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=30.61 E-value=1.1e+02 Score=23.75 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=30.7
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcce
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYV 43 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 43 (512)
.+...+... +.+++.|.++|.++.....+.+.+..+|.-
T Consensus 65 ~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 65 ELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 455666667 889999999999988777777777888863
No 258
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.39 E-value=1.9e+02 Score=29.83 Aligned_cols=82 Identities=16% Similarity=-0.046 Sum_probs=59.2
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+......+.. ..++.+++++...++-... ....+++++..|+..+.+.......++...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE-FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 4677776555444332 3478889998877664433 23447888899999998877777788999999999999888
Q ss_pred chHHHH
Q 010344 236 VPSLVK 241 (512)
Q Consensus 236 ~P~~~~ 241 (512)
.+....
T Consensus 121 ~~~~~~ 126 (542)
T PRK07786 121 EAALAP 126 (542)
T ss_pred ccchHH
Confidence 766544
No 259
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.35 E-value=1.3e+02 Score=31.26 Aligned_cols=81 Identities=17% Similarity=0.095 Sum_probs=58.2
Q ss_pred EecCchhHHHHHHhhc----cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEe
Q 010344 159 PWTQLSPIRCAAEAWG----HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLG 234 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~ 234 (512)
.+|...+......... ..++.+++++....+-... .+..+++++..|+..+.+++....+.+.+.+++.+++.++
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQ-YPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 4577666554443333 2477889998877654422 2334788999999999988777788999999999999998
Q ss_pred cchHHH
Q 010344 235 TVPSLV 240 (512)
Q Consensus 235 ~~P~~~ 240 (512)
..+...
T Consensus 127 ~~~~~~ 132 (560)
T PRK08974 127 IVSNFA 132 (560)
T ss_pred Eecccc
Confidence 766543
No 260
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=30.30 E-value=2.2e+02 Score=32.71 Aligned_cols=98 Identities=9% Similarity=0.028 Sum_probs=68.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEecCchhHHHHHHhhccc--cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCC
Q 010344 138 PVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHI--DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGS 215 (512)
Q Consensus 138 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 215 (512)
.++.++.+.. .| . .+|...+...+......+ ...++|++...+|-+.. ....+++++..|+..+..+..
T Consensus 628 ~p~~~a~~~~-~~---~----~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~~~ 698 (1146)
T PRK08633 628 NWSRLAVADS-TG---G----ELSYGKALTGALALARLLKRELKDEENVGILLPPSVA-GALANLALLLAGKVPVNLNYT 698 (1146)
T ss_pred cCCCcEEEcC-CC---C----cCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchH-HHHHHHHHHHcCCEEEEeCCC
Confidence 5666766532 12 1 367777665544443322 35789998887766543 223478899999998888877
Q ss_pred CchhhHHHHHHhcCceEEecchHHHHHHH
Q 010344 216 PLERSFGKFVQDSGVSVLGTVPSLVKAWK 244 (512)
Q Consensus 216 ~~~~~~~~~l~~~~~t~l~~~P~~~~~l~ 244 (512)
..++++...+++.+++.++..+.....+.
T Consensus 699 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 699 ASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred cCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 77889999999999999999887776654
No 261
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=30.20 E-value=1.6e+02 Score=30.39 Aligned_cols=78 Identities=21% Similarity=0.083 Sum_probs=56.6
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+........ ...++.+++++...++-... ....+++.+..|+.++..........+...+++.++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPD-HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH-HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 467776654443333 34578899999887775432 23347788889999998877777889999999999999876
Q ss_pred ch
Q 010344 236 VP 237 (512)
Q Consensus 236 ~P 237 (512)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 53
No 262
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=29.89 E-value=4.2e+02 Score=23.88 Aligned_cols=48 Identities=19% Similarity=0.221 Sum_probs=27.7
Q ss_pred cceEEEeCCCeEEEEeccCceeeecce---ecchHHHHHhhhcCCcceeeeeEEeeC
Q 010344 378 GDIIKRTVGGYIIVQGRADDTMNLGGI---KTSSVEIERVCDGADESILETAAISVS 431 (512)
Q Consensus 378 GD~~~~~~~g~l~i~gR~~d~i~~~G~---~v~~~~iE~~l~~~~~~v~~~~v~~~~ 431 (512)
|++.|.++||...|.|.. +..++. ++.-...+..+. ..+ .+.++++.+
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~-~l~--~~~i~~g~~ 105 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLN-ALE--KEMIVYKAP 105 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHH-hhh--hhcEEecCC
Confidence 568888999999998874 444332 443333344444 444 344555544
No 263
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=29.88 E-value=2.3e+02 Score=22.00 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=33.3
Q ss_pred HHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 34 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 34 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
...+-..|.-++-+.+..+.+++...+.+.+|++|..+..
T Consensus 20 ~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 20 ARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3344457888889999999999999999999999988764
No 264
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.87 E-value=1.5e+02 Score=30.76 Aligned_cols=81 Identities=15% Similarity=0.035 Sum_probs=59.0
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..+.. ..++..+|++...++-...+ +..+++++..|+..+.+++....+++...++..+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 3677776555444333 34778899988777664432 3447888999988888877777889999999999999988
Q ss_pred chHHH
Q 010344 236 VPSLV 240 (512)
Q Consensus 236 ~P~~~ 240 (512)
.+...
T Consensus 128 ~~~~~ 132 (563)
T PRK06710 128 LDLVF 132 (563)
T ss_pred eccch
Confidence 76543
No 265
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=29.84 E-value=1.2e+02 Score=30.76 Aligned_cols=78 Identities=6% Similarity=-0.110 Sum_probs=56.5
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...+..+++++....+-... .+..+++.+..|+..+.++.....+.+...++..++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 367777766554443 34567789998877764432 33457888899998888877777788888999999998887
Q ss_pred ch
Q 010344 236 VP 237 (512)
Q Consensus 236 ~P 237 (512)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 266
>PRK06060 acyl-CoA synthetase; Validated
Probab=28.65 E-value=2e+02 Score=31.06 Aligned_cols=80 Identities=13% Similarity=-0.027 Sum_probs=58.3
Q ss_pred ecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 160 WTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 160 ~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
+|...+......+. ...++.+++++...++-+..+ ...+++++..|+..+.+++.....++...+++.++..++..
T Consensus 31 ~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~ 109 (705)
T PRK06060 31 VTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTS 109 (705)
T ss_pred eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEc
Confidence 67877765544443 345788999998877665432 23477888999988888777777888888999999888876
Q ss_pred hHHH
Q 010344 237 PSLV 240 (512)
Q Consensus 237 P~~~ 240 (512)
....
T Consensus 110 ~~~~ 113 (705)
T PRK06060 110 DALR 113 (705)
T ss_pred hHHh
Confidence 5443
No 267
>PRK06188 acyl-CoA synthetase; Validated
Probab=28.38 E-value=1.9e+02 Score=29.64 Aligned_cols=79 Identities=14% Similarity=0.026 Sum_probs=58.3
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..... ..++.+++++....+-... .+..+++++..|+..+..+.....+.+...++..+++.++.
T Consensus 37 ~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~ 115 (524)
T PRK06188 37 RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPE-VLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIV 115 (524)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEE
Confidence 4677776655444333 3577889988877655432 33347789999999999887777788999999999999988
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
.+.
T Consensus 116 ~~~ 118 (524)
T PRK06188 116 DPA 118 (524)
T ss_pred ecc
Confidence 776
No 268
>PRK05852 acyl-CoA synthetase; Validated
Probab=28.30 E-value=1.9e+02 Score=29.78 Aligned_cols=76 Identities=9% Similarity=-0.077 Sum_probs=56.1
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+........ ...++.++|++...++-.. -....+++++..|+..+..+.......+...++..+++.++.
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNA-EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcH-HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEE
Confidence 356666655444333 3457889999887765543 233458899999999999887777888999999999999874
No 269
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=28.11 E-value=2.2e+02 Score=29.37 Aligned_cols=96 Identities=17% Similarity=-0.026 Sum_probs=66.5
Q ss_pred eEEEEecCCCCCCCceEEecCchhHHHHHHhhc----cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCc
Q 010344 142 VINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG----HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPL 217 (512)
Q Consensus 142 ~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 217 (512)
-..++|-+-.++. -.+|.+.+......... ..+. +||+++..+|...-.. ..++++...|+....+...+.
T Consensus 26 ~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~-~a~LA~~riGAI~~~vf~~f~ 100 (528)
T COG0365 26 DTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAV-IALLATARIGAIPAVVSPGLS 100 (528)
T ss_pred ceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHH-HHHHHHHHcCCEEeecccCCC
Confidence 3455554444444 45677766554443333 3456 9999999998765433 347788889998888777888
Q ss_pred hhhHHHHHHhcCceEEecchHHHHH
Q 010344 218 ERSFGKFVQDSGVSVLGTVPSLVKA 242 (512)
Q Consensus 218 ~~~~~~~l~~~~~t~l~~~P~~~~~ 242 (512)
++.+..-+++-++.++++....++.
T Consensus 101 ~~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 101 AEAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred HHHHHHHHHccCCCEEEEecccccc
Confidence 8999999999999998877655543
No 270
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=28.05 E-value=2.7e+02 Score=27.33 Aligned_cols=15 Identities=13% Similarity=0.299 Sum_probs=6.2
Q ss_pred HHHhcceEeecCCCc
Q 010344 37 IILAGYVVVSIADSF 51 (512)
Q Consensus 37 ~~~~G~~~v~l~~~~ 51 (512)
++..|-.++..+|.+
T Consensus 86 ll~~GD~Vl~~~p~y 100 (382)
T TIGR02080 86 LLGPDDLLVAPHDCY 100 (382)
T ss_pred HcCCCCEEEEcCCCc
Confidence 334444444334444
No 271
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=28.01 E-value=25 Score=16.53 Aligned_cols=9 Identities=33% Similarity=0.379 Sum_probs=6.5
Q ss_pred ecCCccccc
Q 010344 287 CCGGTELAS 295 (512)
Q Consensus 287 ~yG~tE~~~ 295 (512)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 272
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=27.52 E-value=2.4e+02 Score=23.58 Aligned_cols=59 Identities=12% Similarity=0.248 Sum_probs=42.9
Q ss_pred hhccCceEEEecCCCchhhHHHHHHhc-CceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCC
Q 010344 202 SFLSGAALALYHGSPLERSFGKFVQDS-GVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSN 268 (512)
Q Consensus 202 ~l~~G~~~~~~~~~~~~~~~~~~l~~~-~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~ 268 (512)
.+...+..++++.......+++.|.+. ++|++.-.......|.+. +.++.++.||+.-+
T Consensus 15 ~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~ 74 (161)
T PF00455_consen 15 SLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNP 74 (161)
T ss_pred HhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEc
Confidence 344445556667677778888888887 888888888888877654 26888999997644
No 273
>PRK15348 type III secretion system lipoprotein SsaJ; Provisional
Probab=26.85 E-value=4.7e+02 Score=23.90 Aligned_cols=72 Identities=13% Similarity=0.209 Sum_probs=42.8
Q ss_pred HHHHHhhhcCCcceeeeeEEee-CCCCCC--CceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEEEec
Q 010344 409 VEIERVCDGADESILETAAISV-SPAGGG--PEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVL 483 (512)
Q Consensus 409 ~~iE~~l~~~~~~v~~~~v~~~-~~~~~~--~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~ 483 (512)
.|+|+.|. ..++|.++-|... |+.... ...+.|-|.++-... .+.+...-.|+..+...++. ..|.+|-+++
T Consensus 110 gELarTI~-~idgV~~ArVhL~lP~~~~~~~~~~asASV~I~~~~~-~~~~~~~v~I~~LVA~SV~g-L~~enVTVvd 184 (249)
T PRK15348 110 QRIEGMLS-QMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQ-VNMEAFRVKIKDLIEMSIPG-LQYSKISILM 184 (249)
T ss_pred HHHHHHHH-hCCCeeEeEEEEECCCCCcccCCCCccEEEEEEeCCC-CChHHHHHHHHHHHHHhcCC-CCccceEEEe
Confidence 78999998 8999999988554 322211 123444444433222 33333332577767666655 6677777775
No 274
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.74 E-value=2.7e+02 Score=26.46 Aligned_cols=61 Identities=15% Similarity=0.103 Sum_probs=48.9
Q ss_pred HHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 9 ALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 9 ~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
.|++. +++|.+|+|..--+.-++...+|.+. |.-+..++...+ .-...++..++...+...
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~~--kkeea~~~LGAd~fv~~~ 234 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSSK--KKEEAIKSLGADVFVDST 234 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCch--hHHHHHHhcCcceeEEec
Confidence 47777 99999999999999999999999988 777677766542 234578888999877765
No 275
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=26.48 E-value=2.7e+02 Score=24.57 Aligned_cols=73 Identities=16% Similarity=0.166 Sum_probs=41.4
Q ss_pred chHHHHHhhhcCCcceeeeeEEeeCCCCC--C--CceEE--EEEEecCCCCCCcHHHHHHHHHHHHHhccCCccceeeEE
Q 010344 407 SSVEIERVCDGADESILETAAISVSPAGG--G--PEVLV--ICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVK 480 (512)
Q Consensus 407 ~~~~iE~~l~~~~~~v~~~~v~~~~~~~~--~--~~~~~--a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~ 480 (512)
--.++|+.|. ..++|..+-|...-++.. . .+.+. +++.++++.. .+ +-.+.|++.+..-.+. ..|..|.
T Consensus 116 le~eL~~tI~-~i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~-l~--~qv~~I~~LVa~sV~g-L~~enVt 190 (206)
T PF01514_consen 116 LEGELERTIE-SIDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSE-LS--EQVQGIQNLVASSVPG-LKPENVT 190 (206)
T ss_dssp HHHHHHHHHT-TSTTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS---G--GGHHHHHHHHHHHSTT---GGGEE
T ss_pred HHHHHHHHHH-cCCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCC-hH--HHHHHHHHHHHHhcCC-CCcccEE
Confidence 3468999998 899999998876544331 1 12244 4555555554 44 4455666666665554 6667888
Q ss_pred EecC
Q 010344 481 IVLE 484 (512)
Q Consensus 481 ~~~~ 484 (512)
++|.
T Consensus 191 VvD~ 194 (206)
T PF01514_consen 191 VVDQ 194 (206)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 8874
No 276
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=26.17 E-value=3.3e+02 Score=26.81 Aligned_cols=12 Identities=17% Similarity=0.307 Sum_probs=5.6
Q ss_pred CCCCCEEEEEcC
Q 010344 14 FSKGDAIAIDMP 25 (512)
Q Consensus 14 i~~gd~V~i~~~ 25 (512)
+++||.|.+..+
T Consensus 88 ~~~GD~Vl~~~~ 99 (386)
T PRK08045 88 LKPGDLLVAPHD 99 (386)
T ss_pred cCCCCEEEEcCC
Confidence 455555444433
No 277
>PRK07787 acyl-CoA synthetase; Validated
Probab=26.01 E-value=1.8e+02 Score=29.24 Aligned_cols=76 Identities=7% Similarity=-0.025 Sum_probs=55.8
Q ss_pred EecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344 159 PWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP 237 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P 237 (512)
.+|...+...+......+ .+++++....+-.- -....+++.+..|+..+..+.....+.+...+++.+++.++..+
T Consensus 25 ~~Ty~el~~~~~~~a~~L--~~~~~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~ 100 (471)
T PRK07787 25 VLSRSDLAGAATAVAERV--AGARRVAVLATPTL-ATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPA 100 (471)
T ss_pred EEEHHHHHHHHHHHHHHh--ccCCEEEEECCCCH-HHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecC
Confidence 367777776666655443 36687776655442 22334788999999999888777788999999999999988865
No 278
>KOG3055 consensus Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=25.95 E-value=3.8e+02 Score=23.05 Aligned_cols=93 Identities=13% Similarity=0.040 Sum_probs=61.1
Q ss_pred HHHHHHhccCCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCccccch
Q 010344 5 LVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 84 (512)
Q Consensus 5 ~~a~~L~~~i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~~~~~ 84 (512)
..|...+..=-.|..|.++.||+-+...-.|-.+- -..-+.-..+.+....-|+....++|+++--+.++--.++++
T Consensus 48 yYAklYK~~~l~G~HVImLGPn~~~AA~~ALh~~P---g~LQvGGGIN~~Nc~~wl~egASkVIVTSwlF~~g~fdL~RL 124 (263)
T KOG3055|consen 48 YYAKLYKEDGLTGGHVIMLGPNSQAAAIGALHAYP---GGLQVGGGINSENCMSWLEEGASKVIVTSWLFNNGKFDLERL 124 (263)
T ss_pred HHHHHHhhcCCCcceEEEECCCcHHHHHHHHHhCC---CceeecCccChHHHHHHHHhcCceEEEEEEeccCCcccHHHH
Confidence 34555555523455788889999876654443322 223345566778888999998889998886554444556777
Q ss_pred hhHHhcCCCceEEeec
Q 010344 85 SKVAEAGPLKAVVLPV 100 (512)
Q Consensus 85 ~~~~~~~~~~~~~~~~ 100 (512)
..+.+.......+++.
T Consensus 125 k~i~s~~GKdRlvvDl 140 (263)
T KOG3055|consen 125 KDIVSIVGKDRLVVDL 140 (263)
T ss_pred HHHHHHhCcceEEEEe
Confidence 7787777766666654
No 279
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=25.62 E-value=1.7e+02 Score=28.38 Aligned_cols=64 Identities=17% Similarity=0.186 Sum_probs=42.5
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCC-----cCHHHHHHHHHhcCccEEEecc
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
++--+|... +++||.|.+-..+ +....-|+...|+.++.++-+ .+.+.+...++.- .++|+...
T Consensus 52 Al~~al~~l~~~~gdeVi~p~~t---~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~-t~ai~~~h 121 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPAYT---FPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPK-TKAILVVH 121 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEESSS----THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTT-EEEEEEE-
T ss_pred HHHHHHHhcCCCcCceEecCCCc---chHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccC-ccEEEEec
Confidence 445556667 9999998886544 455667888999998887654 5778888887754 36666654
No 280
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=25.57 E-value=4.6e+02 Score=24.41 Aligned_cols=55 Identities=22% Similarity=0.248 Sum_probs=35.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCC----------CcCHHHHHHHHHh-cCccEEEec
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIAD----------SFAAREIATRLRV-SKAKGIFTQ 71 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~iv~~ 71 (512)
+++||.|.+.-+.+.-. .-++...|+.++.+.+ ..+.+++...++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s~---~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKSV---INGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHHH---HHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 88999888776544332 3345567877766644 2467788888765 457765554
No 281
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=25.43 E-value=2.1e+02 Score=30.18 Aligned_cols=79 Identities=4% Similarity=-0.092 Sum_probs=57.0
Q ss_pred EEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCc-----hhhHHHHHHhcC
Q 010344 158 IPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPL-----ERSFGKFVQDSG 229 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~-----~~~~~~~l~~~~ 229 (512)
..+|...+...+..... ..++.++|++...++-+.- ....+++++..|+.++.++.... ++++...+++.+
T Consensus 68 ~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~ 146 (614)
T PRK08180 68 RRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIE-HALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLT 146 (614)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCC
Confidence 45688777665554443 4578899998877765532 22347889999999998876544 578888899999
Q ss_pred ceEEecch
Q 010344 230 VSVLGTVP 237 (512)
Q Consensus 230 ~t~l~~~P 237 (512)
+..++...
T Consensus 147 ~~~li~~~ 154 (614)
T PRK08180 147 PGLVFADD 154 (614)
T ss_pred CcEEEEcC
Confidence 98888754
No 282
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=25.17 E-value=2e+02 Score=27.59 Aligned_cols=60 Identities=17% Similarity=0.133 Sum_probs=46.1
Q ss_pred HHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEecc
Q 010344 9 ALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 9 ~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
.|++. +++|++|+|..--+.-+++..+|-.. |+-++-++-+... .....+.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~~K---~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSEEK---LELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCChHH---HHHHHHhCCcEEEEcC
Confidence 46677 99999999999999999999998865 4777776554333 3456777888888764
No 283
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=25.16 E-value=2.9e+02 Score=27.08 Aligned_cols=60 Identities=18% Similarity=0.216 Sum_probs=31.5
Q ss_pred HHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCC-----cCHHHHHHHHHhcCccEEE
Q 010344 6 VANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIF 69 (512)
Q Consensus 6 ~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~iv 69 (512)
+...|... +++||.|.+-.+. |.....++...|+.++.++.+ .+.+.+...++. +.++|+
T Consensus 61 l~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 61 MHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34444555 6777776654433 222334455667766655432 345666665543 455554
No 284
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=25.04 E-value=4.6e+02 Score=24.29 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=40.3
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCc----CHHHHHHHHHhcCccEEEeccc
Q 010344 15 SKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSF----AAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 15 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
+.|..|.+++.+........ +...|..+..++-.. ..+++..++++.+++++|+|..
T Consensus 29 ~~g~~v~f~~~~~~~~~~~~--i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y 89 (279)
T TIGR03590 29 AQGAEVAFACKPLPGDLIDL--LLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHY 89 (279)
T ss_pred HCCCEEEEEeCCCCHHHHHH--HHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCC
Confidence 45777888887766654443 357777776664332 2457889999999999999974
No 285
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=25.03 E-value=2.9e+02 Score=27.20 Aligned_cols=12 Identities=25% Similarity=0.598 Sum_probs=5.9
Q ss_pred CCCCCEEEEEcC
Q 010344 14 FSKGDAIAIDMP 25 (512)
Q Consensus 14 i~~gd~V~i~~~ 25 (512)
+++||.|.+..+
T Consensus 89 l~~GD~Vlv~~~ 100 (385)
T PRK08574 89 LKAGDRVVLPME 100 (385)
T ss_pred hCCCCEEEEcCC
Confidence 455555544433
No 286
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=24.89 E-value=1.4e+02 Score=21.73 Aligned_cols=18 Identities=17% Similarity=0.036 Sum_probs=14.0
Q ss_pred ccccccCCccEEEeCCCC
Q 010344 310 AFSTATMTTGFVILDELG 327 (512)
Q Consensus 310 ~~G~p~~~~~~~i~d~~~ 327 (512)
.-|.|+++..++++|.+|
T Consensus 16 ~~G~Pv~gAyVRLLD~sg 33 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLDSSG 33 (85)
T ss_pred cCCcCCCCeEEEEEcCCC
Confidence 456788888899998764
No 287
>PRK05939 hypothetical protein; Provisional
Probab=24.63 E-value=2.9e+02 Score=27.37 Aligned_cols=56 Identities=13% Similarity=0.229 Sum_probs=24.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEec
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 71 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~ 71 (512)
+++||.|.+.-+.-......+-++.+.|+.+..++.. ..+++...++. +.++|++.
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 5666665553322112222222334456555555432 34445554432 34444443
No 288
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.60 E-value=6.6e+02 Score=26.49 Aligned_cols=82 Identities=12% Similarity=-0.013 Sum_probs=54.5
Q ss_pred EecCchhHHHHHHhhccc--cccCCcEEEecCCccchhhhHHHHhhhccCceEEEe-cCCCc--hhhHHHHHHhcCceEE
Q 010344 159 PWTQLSPIRCAAEAWGHI--DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALY-HGSPL--ERSFGKFVQDSGVSVL 233 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~--~~~~~~~l~~~~~t~l 233 (512)
.+|.+.+...+..+...+ .+.++|++...++-+.. ....+++++..|+..+.+ +.... .+++...+++.++..+
T Consensus 55 ~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~v 133 (631)
T PRK07769 55 DLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLD-YLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAI 133 (631)
T ss_pred EeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChH-HHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEE
Confidence 467777765554443322 15789998887765532 233477888899887765 22221 4668888999999999
Q ss_pred ecchHHHH
Q 010344 234 GTVPSLVK 241 (512)
Q Consensus 234 ~~~P~~~~ 241 (512)
+.......
T Consensus 134 i~~~~~~~ 141 (631)
T PRK07769 134 LTTTDSAE 141 (631)
T ss_pred EEChHHHH
Confidence 88876544
No 289
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=24.23 E-value=3.4e+02 Score=26.48 Aligned_cols=64 Identities=14% Similarity=0.072 Sum_probs=37.6
Q ss_pred HHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCC-----CcCHHHHHHHHHh---cCccEEEec
Q 010344 5 LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIAD-----SFAAREIATRLRV---SKAKGIFTQ 71 (512)
Q Consensus 5 ~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~iv~~ 71 (512)
.+...+... +++||.|.+-.+.. ....-++...|+.++.++. ..+.+.+...++. -++++|+..
T Consensus 56 al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 56 ALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 344444555 78888877765543 3334556667777665543 2466777777763 355666543
No 290
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=24.12 E-value=1.4e+02 Score=16.36 Aligned_cols=18 Identities=17% Similarity=0.259 Sum_probs=13.9
Q ss_pred EeCCCeEEEEeccCceee
Q 010344 383 RTVGGYIIVQGRADDTMN 400 (512)
Q Consensus 383 ~~~~g~l~i~gR~~d~i~ 400 (512)
.+++|.+++.++....|.
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 348999999988777665
No 291
>PRK09192 acyl-CoA synthetase; Validated
Probab=24.09 E-value=3.2e+02 Score=28.46 Aligned_cols=85 Identities=9% Similarity=-0.092 Sum_probs=58.9
Q ss_pred EEecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCc-------hhhHHHHHHh
Q 010344 158 IPWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPL-------ERSFGKFVQD 227 (512)
Q Consensus 158 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~-------~~~~~~~l~~ 227 (512)
-.+|...+...+..... ..++.++|++...++-+.. ....+++++..|+..+.++.... .+++...+++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGD-FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchh-HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 45777777654444333 4578899998887766332 33347788899999888753221 4678889999
Q ss_pred cCceEEecchHHHHHH
Q 010344 228 SGVSVLGTVPSLVKAW 243 (512)
Q Consensus 228 ~~~t~l~~~P~~~~~l 243 (512)
.++..++........+
T Consensus 127 ~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 127 AQPAAIITPDELLPWV 142 (579)
T ss_pred cCCCEEEeChHHHHHH
Confidence 9999998887655443
No 292
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=24.02 E-value=1.5e+02 Score=28.37 Aligned_cols=44 Identities=18% Similarity=0.142 Sum_probs=36.5
Q ss_pred cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEe
Q 010344 2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVV 45 (512)
Q Consensus 2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 45 (512)
+.+.|...+.+. +.+++.|.++|.++......++++-.+|.--+
T Consensus 253 ~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 253 PAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred CHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 346677778888 99999999999999988888999999997533
No 293
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=23.69 E-value=2.6e+02 Score=28.09 Aligned_cols=76 Identities=4% Similarity=-0.050 Sum_probs=52.1
Q ss_pred cCchhHHHHHHhhc---cccc-cCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 161 TQLSPIRCAAEAWG---HIDM-KVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 161 s~~~~~~~~~~~~~---~~~~-~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
..+.+...+..... ..+. ..+++++...+-+ .-....+++++..|+.++.++.....+++...+++.+++.++..
T Consensus 21 ~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~-~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 21 NSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDP-LQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCC-HHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 34445544444333 3344 4688877665533 22334478889999999999877788899999999999988764
Q ss_pred h
Q 010344 237 P 237 (512)
Q Consensus 237 P 237 (512)
.
T Consensus 100 ~ 100 (452)
T PRK07445 100 D 100 (452)
T ss_pred C
Confidence 4
No 294
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=23.33 E-value=4.4e+02 Score=21.93 Aligned_cols=112 Identities=9% Similarity=-0.014 Sum_probs=62.8
Q ss_pred eEEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhH---HHHHHhcCceEE
Q 010344 157 AIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSF---GKFVQDSGVSVL 233 (512)
Q Consensus 157 ~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~---~~~l~~~~~t~l 233 (512)
..++-+.+..+.+.... +. ..-.++|.... -......++.-|...++.+.++++++++.+ -.++++++.+.+
T Consensus 21 V~VvENp~Vf~~~~~~~---~~-~~~pLVCt~G~-p~~A~~~LL~~L~~~g~~l~y~GDfDp~Gl~IA~~l~~r~~~~~W 95 (152)
T PF09664_consen 21 VYVVENPAVFSALADEL---GA-SCPPLVCTSGQ-PSAAARRLLDRLAAAGARLYYSGDFDPEGLRIANRLIQRYGARPW 95 (152)
T ss_pred EEEEecHHHHHHHHHhc---CC-CCCeEEEcCCc-HHHHHHHHHHHHHhCCCEEEEecCCCHHHHHHHHHHHHHhCCccc
Confidence 55677777777665542 11 22233333322 222223345555544455555778887643 355678898889
Q ss_pred ecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHh
Q 010344 234 GTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASK 278 (512)
Q Consensus 234 ~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~ 278 (512)
.+.+..|.............+. +..+ .+..+++...+++.
T Consensus 96 rm~~~dY~~~~~~~~~~~~~l~-l~~v----~p~~~~L~~~m~~~ 135 (152)
T PF09664_consen 96 RMDAEDYLAALSAEPLSGRRLK-LPNV----APWLPELAEAMRER 135 (152)
T ss_pred cCCHHHHHHhccccCCCCCcCC-cccC----ChhcHHHHHHHHHh
Confidence 9999998766655443443333 3322 45556666666654
No 295
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=23.24 E-value=2.9e+02 Score=27.94 Aligned_cols=62 Identities=15% Similarity=0.265 Sum_probs=40.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCC-CcCHHHHHHHHHhcCccEEEeccchhc
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIAD-SFAAREIATRLRVSKAKGIFTQDFILR 76 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~iv~~~~~~~ 76 (512)
+++||+|++=-|.- ......+-...+..+.+|++. ....+.+...+++.++|++.+...+++
T Consensus 176 ~~pGd~v~vE~PtY-~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qN 238 (459)
T COG1167 176 LDPGDTVLVEDPTY-PGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQN 238 (459)
T ss_pred CCCCCEEEEcCCCc-HHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCC
Confidence 77899888766633 333344444444444445532 457788999998889999988877653
No 296
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=23.00 E-value=3.7e+02 Score=25.84 Aligned_cols=55 Identities=16% Similarity=0.242 Sum_probs=25.4
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCC----CcCHHHHHHHHHhcCccEEEec
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIAD----SFAAREIATRLRVSKAKGIFTQ 71 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----~~~~~~l~~~l~~~~~~~iv~~ 71 (512)
+++||.|++--|.-. ....++...|+..+.++. ....+++...++..++++++..
T Consensus 97 ~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 97 INKGDVVIYPHPSFA---MYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred cCCCCEEEEeCCChH---HHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEe
Confidence 566666665443222 222233445554444422 1334555555544455555443
No 297
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=22.99 E-value=2.1e+02 Score=29.09 Aligned_cols=79 Identities=10% Similarity=-0.033 Sum_probs=57.9
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+..... ..++..++++....+-+..+ ...+++++..|+..+.++.....+.+...+++.++..++.
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 103 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHM-LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIH 103 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHH-HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEe
Confidence 4777777665554443 34678888887766655332 3447889999998888887777788999999999999887
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
...
T Consensus 104 ~~~ 106 (502)
T TIGR01734 104 TAE 106 (502)
T ss_pred ccc
Confidence 654
No 298
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=22.91 E-value=3.4e+02 Score=26.63 Aligned_cols=56 Identities=18% Similarity=0.187 Sum_probs=35.2
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCC--C----cCHHHHHHHHHhc------CccEEEecc
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIAD--S----FAAREIATRLRVS------KAKGIFTQD 72 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~----~~~~~l~~~l~~~------~~~~iv~~~ 72 (512)
+++||.|.+.-+.+.. .+.++...|+.++.++. . .+.+.+...++.. ++++|+...
T Consensus 99 ~~~gd~Vlv~~~~h~s---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~ 166 (387)
T PRK09331 99 CKKGDYVVLDGLAHYT---SYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTH 166 (387)
T ss_pred cCCCCEEEECCCchHH---HHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEEC
Confidence 7889988775433333 33456677887776654 1 4577787777653 567666553
No 299
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=22.84 E-value=2.6e+02 Score=26.63 Aligned_cols=66 Identities=11% Similarity=-0.112 Sum_probs=43.0
Q ss_pred HHHHhcc-CCC-CCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 7 ANALDTM-FSK-GDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 7 a~~L~~~-i~~-gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
|.++... ... ++.|... ..+-.-....+++...|.-+..+-|...+..-...++..++++++++..
T Consensus 58 a~~~l~~a~~~g~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~ 125 (324)
T cd01563 58 MTVAVSKAKELGVKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGN 125 (324)
T ss_pred HHHHHHHHHHcCCCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3444444 333 4444443 4455555566788888888776666555666788899999999999863
No 300
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=22.84 E-value=2.7e+02 Score=26.17 Aligned_cols=63 Identities=8% Similarity=0.116 Sum_probs=36.7
Q ss_pred hHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCC
Q 010344 408 SVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNP 472 (512)
Q Consensus 408 ~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 472 (512)
..+|++.+. ++|+|.++--+-....... ..+.+.++.+++..-.+..++.+.++++++++.+.
T Consensus 215 ~~~I~~~i~-~~~~v~~v~~l~~~~~G~~-~~v~v~i~v~~~~~~~e~h~i~~~ie~~l~~~~~~ 277 (299)
T PRK09509 215 RQEIIDIVT-SWPGVSGAHDLRTRQSGPT-RFIQLHLEMEDNLPLVQAHMIADQVEQALLRRFPG 277 (299)
T ss_pred HHHHHHHHH-hCCCCcCceeeeeEeeCCe-EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 457888887 7888766543333322222 45566677765432123456777777777766543
No 301
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=22.68 E-value=5.1e+02 Score=27.98 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=40.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCc---------C-----HHHHHHHHHhc-Ccc----EEEeccch
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSF---------A-----AREIATRLRVS-KAK----GIFTQDFI 74 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~iv~~~~~ 74 (512)
+++||.|.+-=+++-. + +-|+...|+.++-+.|.. + .+.+...++.. +++ ++|+....
T Consensus 232 ~~~Gd~VLvdRN~HKS-v--~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTVLIDRNCHKS-L--THLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEEEeecccHHH-H--HHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 8999988765555544 3 239999999999998764 3 67788877664 334 66666543
No 302
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=22.11 E-value=3.1e+02 Score=26.89 Aligned_cols=54 Identities=17% Similarity=-0.016 Sum_probs=45.8
Q ss_pred EEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccch
Q 010344 21 AIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFI 74 (512)
Q Consensus 21 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~ 74 (512)
.|+++-+-....+.+|+.++|..+..+=|...+..-.+.+++.++.+++..+.+
T Consensus 117 ViasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 117 VIASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred eEEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 455555666777889999999999888899999999999999999999998754
No 303
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=21.69 E-value=5.2e+02 Score=24.69 Aligned_cols=12 Identities=17% Similarity=0.509 Sum_probs=5.7
Q ss_pred CCCCCEEEEEcC
Q 010344 14 FSKGDAIAIDMP 25 (512)
Q Consensus 14 i~~gd~V~i~~~ 25 (512)
+++||.|.+..+
T Consensus 71 ~~~g~~vl~~~~ 82 (356)
T cd06451 71 LEPGDKVLVGVN 82 (356)
T ss_pred CCCCCEEEEecC
Confidence 445555544433
No 304
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=21.64 E-value=49 Score=25.03 Aligned_cols=25 Identities=8% Similarity=0.089 Sum_probs=19.7
Q ss_pred ccccccCCccEEEeC-CCCCCCCCCC
Q 010344 310 AFSTATMTTGFVILD-ELGVPYPDDQ 334 (512)
Q Consensus 310 ~~G~p~~~~~~~i~d-~~~~~~~~g~ 334 (512)
+-|.|++|+++++.+ .+|+++..|.
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~~l~~g~ 48 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQVLASGK 48 (97)
T ss_pred CCCCccCCCEEEEEECCCCcEeeeee
Confidence 457899999999999 8877665543
No 305
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=21.46 E-value=2.3e+02 Score=30.69 Aligned_cols=82 Identities=7% Similarity=0.000 Sum_probs=58.2
Q ss_pred EecCchhHHHHHHhhccc--cccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecc
Q 010344 159 PWTQLSPIRCAAEAWGHI--DMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTV 236 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~ 236 (512)
.+|.+.+...+......+ ...++|++...++-+.. ....+++++..|+..+.+.....++++...+++.++..++..
T Consensus 231 ~~Ty~el~~~~~~lA~~L~~~~~~gd~Val~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~ 309 (718)
T PRK08043 231 PDSYRKLLKKTLFVGRILEKYSVEGERIGLMLPNATI-SAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTS 309 (718)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCcHH-HHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEc
Confidence 367777765554443322 14789998887766532 233477888899988887767677899999999999999887
Q ss_pred hHHHH
Q 010344 237 PSLVK 241 (512)
Q Consensus 237 P~~~~ 241 (512)
...+.
T Consensus 310 ~~~~~ 314 (718)
T PRK08043 310 RQFLD 314 (718)
T ss_pred HHHHh
Confidence 66543
No 306
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=21.23 E-value=2.4e+02 Score=27.76 Aligned_cols=59 Identities=14% Similarity=-0.072 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHH--HHHHhcc--eEeecCC-----CcCHHHHHHHHHhcCccEEEecc
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYL--AIILAGY--VVVSIAD-----SFAAREIATRLRVSKAKGIFTQD 72 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~l--A~~~~G~--~~v~l~~-----~~~~~~l~~~l~~~~~~~iv~~~ 72 (512)
+++||.|.+.-+....++.... ++...|+ ..++++. ....+++...+...++++++...
T Consensus 102 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~ 169 (402)
T cd00378 102 LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA 169 (402)
T ss_pred cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence 7888888877665432222111 1333454 3444432 33667777777666777777644
No 307
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=21.18 E-value=2.7e+02 Score=25.25 Aligned_cols=85 Identities=13% Similarity=0.093 Sum_probs=49.1
Q ss_pred hhhccCceEEEecCCCchhhHHHHHHhcCceEEecchHHHHHHHccCCCCCCCcCceeEEEeecCCCCch-------hhH
Q 010344 201 SSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVD-------DDL 273 (512)
Q Consensus 201 ~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~-------~~~ 273 (512)
..+..-+.+++++.+.....+++.|.+.+.|++...+.....|... +.++.++.||+.-+.. ..+
T Consensus 88 a~lI~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~ 159 (240)
T PRK10411 88 LAWIEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLIS 159 (240)
T ss_pred HHhCCCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHH
Confidence 3444444455555555556677777665778888778877776543 3477788888754322 233
Q ss_pred HHHHhhCCCCeeeecCCccc
Q 010344 274 WLASKAYYKPIIECCGGTEL 293 (512)
Q Consensus 274 ~~~~~~~~~~i~~~yG~tE~ 293 (512)
.+.......-++..-|.++.
T Consensus 160 ~l~~~~~d~afis~~gi~~~ 179 (240)
T PRK10411 160 QLKSLEIDLFIFSCEGIDSS 179 (240)
T ss_pred HHHhcCCCEEEEeceeECCC
Confidence 33332223336666666543
No 308
>PRK05934 type III secretion system protein; Validated
Probab=21.11 E-value=5.7e+02 Score=24.19 Aligned_cols=92 Identities=14% Similarity=0.094 Sum_probs=54.4
Q ss_pred HHHHHhhhcCCcceeeeeEEee-CCCCCCCceEEEEEEe--cCCCCCCcHHHHHHHHHHHHHhccCCccceeeEEEecCC
Q 010344 409 VEIERVCDGADESILETAAISV-SPAGGGPEVLVICVVL--KKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEF 485 (512)
Q Consensus 409 ~~iE~~l~~~~~~v~~~~v~~~-~~~~~~~~~~~a~v~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~i~~~~~i 485 (512)
+|+++.|. ..++|..+-|-.. +++......+.|-|++ +++.. ++.+.+ +.|...+...++. ..|..|.++|.-
T Consensus 74 GELaRTIe-sld~VesARVHLAlPe~s~~~~~pTASVvLtL~~G~t-Ls~~QV-~gIvnLVAsSVpG-LtpEnVTVVDq~ 149 (341)
T PRK05934 74 EQLEKDLT-MFHPVAQATVALSLETEDDPMSPAEISVILSLPKAET-LSPSLL-HSITDYLTSSVPG-LTKEHITLSDNL 149 (341)
T ss_pred HHHHHHHH-cccCcceeEEEEeCCCCCccCCCCceEEEEecCCCCc-CCHHHH-HHHHHHHHhcCCC-CCccCeEEECCC
Confidence 47888887 8999999987443 3332221334444444 55544 665554 4566666666655 788899999851
Q ss_pred ------CCCCCchHHHHHHHHHHHh
Q 010344 486 ------PRTASNKLLRRVLKDQLKH 504 (512)
Q Consensus 486 ------P~t~~GKi~r~~l~~~~~~ 504 (512)
+...+..+.-..+...+..
T Consensus 150 GnLLS~~~~~~~~l~~~~~e~~l~~ 174 (341)
T PRK05934 150 GNLYSPLFEQSNSLLTTSLERYLGK 174 (341)
T ss_pred CCCccCCCCCcchHHHHHHHHHHHh
Confidence 1223344555555554443
No 309
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=20.84 E-value=3.3e+02 Score=27.26 Aligned_cols=78 Identities=5% Similarity=-0.094 Sum_probs=57.1
Q ss_pred EecCchhHHHHHHhhc---cccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAWG---HIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|+..+......... ..++.+++++....+-... ....+++.+..|+..+..+.....+.+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPE-TLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALV 106 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 4677777665554443 3478899998877655432 33447888999999999887777788889999999988876
Q ss_pred ch
Q 010344 236 VP 237 (512)
Q Consensus 236 ~P 237 (512)
..
T Consensus 107 ~~ 108 (458)
T PRK09029 107 LE 108 (458)
T ss_pred cC
Confidence 54
No 310
>PRK06234 methionine gamma-lyase; Provisional
Probab=20.72 E-value=4.7e+02 Score=25.86 Aligned_cols=56 Identities=14% Similarity=0.222 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCCHHHHHH-HHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEec
Q 010344 14 FSKGDAIAIDMPMTVHAVII-YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 71 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~-~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~ 71 (512)
+++||.|.+..+........ ..++-..|+.+..++.. ..+++...++. +.++|++.
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-d~e~l~~~i~~-~tklI~ie 156 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-NLEEVRNALKA-NTKVVYLE 156 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-CHHHHHHHhcc-CCeEEEEE
Confidence 66677665554433222222 23344556666655443 34555555533 34555544
No 311
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=20.51 E-value=2.7e+02 Score=28.58 Aligned_cols=79 Identities=14% Similarity=0.011 Sum_probs=55.5
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ...++.+++++...++-... ....+++++..|+..+........+.+...+++.+++.+..
T Consensus 48 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~ 126 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAE-FYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYII 126 (527)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEE
Confidence 467777765544443 34578899998877654432 22337788888988777665666788999999999998887
Q ss_pred chH
Q 010344 236 VPS 238 (512)
Q Consensus 236 ~P~ 238 (512)
.+.
T Consensus 127 ~~~ 129 (527)
T TIGR02275 127 DRA 129 (527)
T ss_pred cCc
Confidence 643
No 312
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=20.49 E-value=5.1e+02 Score=25.81 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=38.5
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCC---------cC-----HHHHHHHHHhcC-cc----EEEeccch
Q 010344 14 FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADS---------FA-----AREIATRLRVSK-AK----GIFTQDFI 74 (512)
Q Consensus 14 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~---------~~-----~~~l~~~l~~~~-~~----~iv~~~~~ 74 (512)
+++||.|.+--+.+-..+ -|+...|+.++-++|. .+ .+.+...++... ++ ++|++...
T Consensus 103 ~~~gd~VLv~RN~HkSv~---~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 103 CRPGDKVLVDRNCHKSVY---NALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp TTTTCEEEEETT--HHHH---HHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred cCCCCEEEEcCCcHHHHH---HHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 899999877665554433 3999999999988774 22 378888887653 33 45666554
Q ss_pred h
Q 010344 75 L 75 (512)
Q Consensus 75 ~ 75 (512)
.
T Consensus 180 ~ 180 (417)
T PF01276_consen 180 Y 180 (417)
T ss_dssp T
T ss_pred C
Confidence 3
No 313
>PHA02553 6 baseplate wedge subunit; Provisional
Probab=20.46 E-value=2.9e+02 Score=28.97 Aligned_cols=73 Identities=14% Similarity=0.042 Sum_probs=45.8
Q ss_pred ccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCC-CceEEEEEEecCCCCCCcHHHHHHHHHHHHHh
Q 010344 394 RADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGG-PEVLVICVVLKKGFTSQPVDKLKMIFSKAIQR 468 (512)
Q Consensus 394 R~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~-~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~ 468 (512)
|.-......++-|.+++-|....+.+|+|..+........... ...+.+.|+++.+.. ++ ..+++.++++|.+
T Consensus 303 ~AP~~~rt~~RAVTa~DYE~lA~~~~p~V~rA~~~~~~~~spp~~G~V~VvVvP~~g~~-ls-~~l~~~I~~yL~~ 376 (611)
T PHA02553 303 LAPRMREAQRRAVTASDYEAFVSERFGSIVQAVQCGGDSLKPPVYGYVFIAVKPKSGLY-LT-DVQKEDIKNYLKK 376 (611)
T ss_pred hhhHhhhcccccccHHHHHHHHHhhCCccEEEEEccCCcCCCCCCceEEEEEecCCCCC-CC-HHHHHHHHHHHHh
Confidence 3334455677899999999999855899998887653332220 014555556655543 33 3666777766654
No 314
>PTZ00297 pantothenate kinase; Provisional
Probab=20.32 E-value=5.4e+02 Score=30.56 Aligned_cols=97 Identities=14% Similarity=-0.003 Sum_probs=67.1
Q ss_pred EecCchhHHHHHHhh---ccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEec
Q 010344 159 PWTQLSPIRCAAEAW---GHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGT 235 (512)
Q Consensus 159 ~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~ 235 (512)
.+|...+...+.... ..+|+.++|++...++-..- .....++++..|+..+.+. ...+++...+++.++.++++
T Consensus 457 ~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~E-wvia~lA~~~~GaV~VPly--~t~~eL~yIL~~S~akvVfv 533 (1452)
T PTZ00297 457 WLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRN-IVILEVACALYGFTTLPLV--GKGSTMRTLIDEHKIKVVFA 533 (1452)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEeCC--CCHHHHHHHHHhcCCcEEEE
Confidence 467777665554443 34689999998877765422 2334678888888888763 23568889999999999999
Q ss_pred chHHHHHHHccCCCCCCCcCceeEEEeec
Q 010344 236 VPSLVKAWKNTNCLQGLDWTKIRSFASTG 264 (512)
Q Consensus 236 ~P~~~~~l~~~~~~~~~~l~~l~~i~~~G 264 (512)
....+..+.+... ..++.+++-+
T Consensus 534 ~~~~l~kl~~i~~------~~Lr~IIv~d 556 (1452)
T PTZ00297 534 DRNSVAAILTCRS------RKLETVVYTH 556 (1452)
T ss_pred chhHHHHHHhhcc------cCCcEEEEEC
Confidence 9888877764321 2577776653
No 315
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=20.20 E-value=3.2e+02 Score=25.61 Aligned_cols=56 Identities=14% Similarity=0.050 Sum_probs=40.9
Q ss_pred CCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccc
Q 010344 17 GDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 73 (512)
Q Consensus 17 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~ 73 (512)
++.|+. ...+-.-..+.++|...|.-++.+-|...+.+....++..+++++.++..
T Consensus 65 ~~~iv~-~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~ 120 (304)
T cd01562 65 AKGVVA-ASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGED 120 (304)
T ss_pred CCcEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 344444 35566667777777888888776666666667788899999999998864
No 316
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=20.09 E-value=1.5e+02 Score=26.42 Aligned_cols=31 Identities=26% Similarity=0.088 Sum_probs=22.9
Q ss_pred HHHHHHhcceEeecCCCcCHHHHHHHHHhcC
Q 010344 34 YLAIILAGYVVVSIADSFAAREIATRLRVSK 64 (512)
Q Consensus 34 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 64 (512)
.=++..+|+.+++|++..+.+.+..+++.++
T Consensus 30 v~~i~~aG~~pv~ip~~~~~~~~~~~l~~id 60 (217)
T PF07722_consen 30 VKAIEAAGGRPVPIPYDADDEELDELLDRID 60 (217)
T ss_dssp HHHHHHTT-EEEEE-SS--HHHHHHHHHCSS
T ss_pred HHHHHHcCCEEEEEccCCCHHHHHHHHhhcC
Confidence 3467888999999999999999999999754
No 317
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=20.09 E-value=81 Score=21.03 Aligned_cols=19 Identities=26% Similarity=0.454 Sum_probs=14.7
Q ss_pred ecceEEEeCCCeEEEEecc
Q 010344 377 HGDIIKRTVGGYIIVQGRA 395 (512)
Q Consensus 377 TGD~~~~~~~g~l~i~gR~ 395 (512)
-|.+.|.++||..+|.|+.
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 4678888999998888874
Done!