Query         010346
Match_columns 512
No_of_seqs    182 out of 1925
Neff          11.2
Searched_HMMs 46136
Date          Thu Mar 28 23:27:37 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010346.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010346hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 8.3E-89 1.8E-93  647.4  49.4  459   39-512    25-487 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 6.9E-82 1.5E-86  623.3  49.6  470   37-512    25-498 (499)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 1.3E-81 2.8E-86  588.0  40.9  453   41-512    32-498 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 9.5E-81   2E-85  617.2  49.0  468   36-512    53-533 (543)
  5 PLN03112 cytochrome P450 famil 100.0 1.5E-80 3.2E-85  615.5  50.1  497   11-512     3-507 (514)
  6 PLN00110 flavonoid 3',5'-hydro 100.0   2E-80 4.3E-85  609.3  49.2  489   13-512     4-496 (504)
  7 PLN02687 flavonoid 3'-monooxyg 100.0 3.5E-80 7.5E-85  611.5  50.2  469   37-512    31-508 (517)
  8 PLN02183 ferulate 5-hydroxylas 100.0 3.1E-80 6.8E-85  611.6  48.2  464   38-512    34-511 (516)
  9 PLN02966 cytochrome P450 83A1  100.0   1E-79 2.2E-84  606.6  47.3  469   36-510    25-497 (502)
 10 PTZ00404 cytochrome P450; Prov 100.0 5.3E-79 1.2E-83  600.1  45.3  452   37-512    26-482 (482)
 11 PLN02394 trans-cinnamate 4-mon 100.0   1E-77 2.2E-82  594.2  47.9  465   37-512    27-501 (503)
 12 PLN00168 Cytochrome P450; Prov 100.0 3.8E-77 8.1E-82  590.2  49.5  466   37-512    32-516 (519)
 13 PLN02290 cytokinin trans-hydro 100.0 3.5E-77 7.6E-82  591.7  40.6  451   39-512    41-514 (516)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 2.1E-77 4.5E-82  582.4  36.3  453   38-512    33-495 (497)
 15 PLN03018 homomethionine N-hydr 100.0 6.1E-75 1.3E-79  571.0  49.2  465   40-512    40-523 (534)
 16 PLN02655 ent-kaurene oxidase   100.0 1.3E-75 2.9E-80  571.8  43.5  452   42-512     1-463 (466)
 17 PLN02500 cytochrome P450 90B1  100.0 2.1E-75 4.6E-80  574.7  42.6  420   34-481    32-467 (490)
 18 KOG0159 Cytochrome P450 CYP11/ 100.0 2.4E-74 5.2E-79  525.6  35.8  449   41-512    51-517 (519)
 19 PLN02169 fatty acid (omega-1)- 100.0 5.3E-74 1.1E-78  562.5  40.8  450   42-512    33-499 (500)
 20 PLN03195 fatty acid omega-hydr 100.0 7.1E-74 1.5E-78  567.6  40.3  452   42-512    32-515 (516)
 21 PF00067 p450:  Cytochrome P450 100.0   4E-75 8.7E-80  575.8  30.1  433   42-481     1-440 (463)
 22 PLN02774 brassinosteroid-6-oxi 100.0 3.2E-73 6.8E-78  554.7  40.0  432   37-511    28-462 (463)
 23 PLN02738 carotene beta-ring hy 100.0 1.8E-72   4E-77  558.9  41.1  441   52-512   143-594 (633)
 24 PLN02196 abscisic acid 8'-hydr 100.0 2.2E-72 4.7E-77  548.2  40.0  425   37-510    32-460 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 1.1E-71 2.3E-76  542.8  39.3  435   37-512     4-449 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-70 2.9E-75  543.5  45.4  436   38-512    40-487 (490)
 27 PLN02936 epsilon-ring hydroxyl 100.0 1.8E-71 3.8E-76  545.1  37.3  451   41-512    13-481 (489)
 28 PLN02426 cytochrome P450, fami 100.0 2.6E-69 5.6E-74  528.4  43.5  440   47-512    48-499 (502)
 29 PLN02987 Cytochrome P450, fami 100.0 1.7E-69 3.7E-74  525.5  41.5  431   39-512    29-468 (472)
 30 KOG0684 Cytochrome P450 [Secon 100.0 1.1E-68 2.3E-73  476.1  33.7  441   41-512    32-484 (486)
 31 PLN02648 allene oxide synthase 100.0 1.4E-60   3E-65  459.2  29.6  401   39-481    16-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.4E-55 7.3E-60  417.4  31.9  358   62-481    25-387 (411)
 33 PF05393 Hum_adeno_E3A:  Human   67.1       8 0.00017   27.1   3.0   37   12-52     35-71  (94)
 34 PF08492 SRP72:  SRP72 RNA-bind  54.7     8.5 0.00018   25.1   1.4    8  425-432    44-51  (59)
 35 PF05952 ComX:  Bacillus compet  51.7      15 0.00032   23.7   2.2   24  325-348     4-27  (57)
 36 PF12554 MOZART1:  Mitotic-spin  50.6      59  0.0013   20.2   4.7   42  303-344     6-47  (48)
 37 PRK06789 flagellar motor switc  49.5      16 0.00035   25.1   2.2   40  368-407    21-62  (74)
 38 COG1759 5-formaminoimidazole-4  40.2      46   0.001   30.3   4.2   70  365-467   275-351 (361)
 39 PF09201 SRX:  SRX;  InterPro:   39.6      23 0.00049   27.5   1.9   23  451-473    18-40  (148)
 40 KOG3506 40S ribosomal protein   36.6      16 0.00035   23.0   0.6   11  444-454    12-22  (56)
 41 PHA02902 putative IMV membrane  34.6      85  0.0018   20.6   3.6   21   13-33      5-25  (70)
 42 KOG3653 Transforming growth fa  33.9 1.4E+02  0.0031   29.2   6.5   36   71-106   222-257 (534)
 43 PF13625 Helicase_C_3:  Helicas  32.1 1.1E+02  0.0024   23.8   4.9   38   62-101    77-114 (129)
 44 PF08776 VASP_tetra:  VASP tetr  31.2      66  0.0014   18.9   2.4   29  333-374     9-37  (40)
 45 PF12508 DUF3714:  Protein of u  30.6      40 0.00086   28.7   2.2   43  361-406    51-94  (200)
 46 cd01324 cbb3_Oxidase_CcoQ Cyto  29.4 1.5E+02  0.0032   18.5   4.7   31    1-31      1-31  (48)
 47 PF14483 Cut8_M:  Cut8 dimerisa  29.3      86  0.0019   18.3   2.8   17  326-342    18-35  (38)
 48 COG0851 MinE Septum formation   28.7 1.2E+02  0.0026   21.7   3.8   18  333-350    35-52  (88)
 49 PF01102 Glycophorin_A:  Glycop  28.6      58  0.0013   25.1   2.6   11   28-38     84-94  (122)
 50 PF09926 DUF2158:  Uncharacteri  28.5      53  0.0012   20.9   2.0   17   73-89      4-20  (53)
 51 PF13893 RRM_5:  RNA recognitio  27.0 1.6E+02  0.0035   18.4   4.3   35   65-99      1-39  (56)
 52 PRK10597 DNA damage-inducible   25.9 1.8E+02  0.0038   20.6   4.3   38   62-99     23-68  (81)
 53 PF14129 DUF4296:  Domain of un  24.9 2.6E+02  0.0057   19.9   6.6   50  299-348    29-78  (87)
 54 PRK05933 type III secretion sy  24.1      68  0.0015   29.3   2.5   45  363-407   315-362 (372)
 55 PF10726 DUF2518:  Protein of f  23.6 1.9E+02  0.0041   23.0   4.5   35    1-35      1-35  (145)
 56 COG2101 SPT15 TATA-box binding  22.3      27 0.00059   28.4  -0.1   36  422-457    35-70  (185)
 57 PF11227 DUF3025:  Protein of u  22.1      45 0.00097   28.5   1.0   23  406-428   188-211 (212)
 58 PF14459 Prok-E2_C:  Prokaryoti  21.7      35 0.00075   25.1   0.3   18  439-456   103-120 (131)
 59 PF15330 SIT:  SHP2-interacting  21.1   3E+02  0.0065   20.7   5.1   11   47-57     45-55  (107)
 60 PF05545 FixQ:  Cbb3-type cytoc  20.5 2.2E+02  0.0049   17.5   4.5    7   25-31     24-30  (49)
 61 COG1886 FliN Flagellar motor s  20.3      85  0.0018   24.8   2.2   43  365-407    82-126 (136)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.3e-89  Score=647.43  Aligned_cols=459  Identities=45%  Similarity=0.829  Sum_probs=407.7

Q ss_pred             CCCCCCCCCCCcccccccCCCc-ccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCC-cchhh
Q 010346           39 KSLPPSPPKLPIIGNLHQLGLF-PHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKL-TPFVK  116 (512)
Q Consensus        39 ~~~ppgp~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~-~~~~~  116 (512)
                      .++||||+++|++||++++... +|+.+.+|.++||||+.+|+|..++|+|+|+++++|++.+++..|.+|+.. .....
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            7789999999999999999776 999999999999999999999999999999999999999999999999982 24455


Q ss_pred             hcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHH
Q 010346          117 LLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRI  196 (512)
Q Consensus       117 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  196 (512)
                      ...++.+.+++.+|+.|+.+||.....+++.+..+ ...+...++++.+++.+.+ ...+++||+...+..++.++|+++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~-~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGK-SFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhh-hhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHH
Confidence            55577888899899999999999999999999988 7777779999999999997 233379999999999999999999


Q ss_pred             HhccccCCCc-chHHHHHHHHHHHHHHhcccccchhhh-hhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 010346          197 ALGRKYSDQG-EVGSKFRKQFKDFIELMATFHVGDYIP-WLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNS  274 (512)
Q Consensus       197 ~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  274 (512)
                      +||.++...+ +...++.+.+.........+...+++| ++.++....+..++.+...+.+.++++..|++++++. . +
T Consensus       183 ~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~-~  260 (489)
T KOG0156|consen  183 LFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G-D  260 (489)
T ss_pred             HhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-c
Confidence            9999999754 344558889999999999999999999 5666654456777888888889999999999998876 2 1


Q ss_pred             CCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCCCCC
Q 010346          275 QVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQKSDI  354 (512)
Q Consensus       275 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  354 (512)
                        +++.|+++.++...+++..+. ++++++.+.+..+++||+|||++|+.|++.+|++|||+|+|+|+||++++|.++.+
T Consensus       261 --~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v  337 (489)
T KOG0156|consen  261 --EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLV  337 (489)
T ss_pred             --CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCC
Confidence              223899999999877543223 99999999999999999999999999999999999999999999999999999889


Q ss_pred             CccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccccCCCC
Q 010346          355 TEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLNSSI  434 (512)
Q Consensus       355 ~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  434 (512)
                      +.+|+.+||||+|||+||+|+||++|..+||.+.+|++++||.|||||.|+++.|++||||++|+||++|+||||++++ 
T Consensus       338 ~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-  416 (489)
T KOG0156|consen  338 SESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-  416 (489)
T ss_pred             ChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999975 


Q ss_pred             CCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeeccC
Q 010346          435 SFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAIPR  512 (512)
Q Consensus       435 ~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (512)
                      +.......++|||.|+|+|||..+|++|+.+++|.|+++|||+++++      .+++.... ++...+.|+.+...||
T Consensus       417 d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~------~~d~~e~~-~~~~~~~pl~~~~~~r  487 (489)
T KOG0156|consen  417 DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG------KVDMEEAG-LTLKKKKPLKAVPVPR  487 (489)
T ss_pred             cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC------CCCCcccc-cceecCCcceeeeecC
Confidence            22336788999999999999999999999999999999999998875      24555553 7888888988888776


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=6.9e-82  Score=623.32  Aligned_cols=470  Identities=37%  Similarity=0.682  Sum_probs=384.8

Q ss_pred             CCCCCCCCCCCCCcccccccCCC-cccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchh
Q 010346           37 SKKSLPPSPPKLPIIGNLHQLGL-FPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFV  115 (512)
Q Consensus        37 ~~~~~ppgp~~~p~lG~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~  115 (512)
                      +..+.||||.++|++||+..+.. +++.++.+++++||+++++++|+.++|+++||+++++|+.++...|.+++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            44567899999999999988854 68889999999999999999999999999999999999998877788777644332


Q ss_pred             hhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHH
Q 010346          116 KLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFR  195 (512)
Q Consensus       116 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  195 (512)
                      .....+....+...++.|+++|+.+..++|+.+.+. .+.+.+.++++++++++.+...+++++|+.+.+..+++|++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~-~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~  183 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVA-SFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCR  183 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHH-HhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHH
Confidence            222212233345567999999998657899999888 8999999999999999986555677899999999999999999


Q ss_pred             HHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 010346          196 IALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNSQ  275 (512)
Q Consensus       196 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (512)
                      ++||.+++....+...+.+.++.....+........+|++.++..+.+..++..++.+.+.+++.+.|+++++....   
T Consensus       184 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---  260 (499)
T PLN03234        184 QAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP---  260 (499)
T ss_pred             HHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc---
Confidence            99999987544334455555555443333333344556554443233444677888899999999999887654221   


Q ss_pred             CCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCCCCCC
Q 010346          276 VEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQKSDIT  355 (512)
Q Consensus       276 ~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  355 (512)
                      ....+|+++.+++...++..+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++++++.+.++
T Consensus       261 ~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~  340 (499)
T PLN03234        261 KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVS  340 (499)
T ss_pred             CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence            12356899999876543322236899999999999999999999999999999999999999999999999998877889


Q ss_pred             ccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCc-cCccCCCCccccCCCC
Q 010346          356 EEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASW-DQAEEFRPERFLNSSI  434 (512)
Q Consensus       356 ~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~  434 (512)
                      .+++.+|||++|||+||+|++|++|...+|.+.+|++++||.|||||.|++++|++||||++| |||++||||||++++.
T Consensus       341 ~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~  420 (499)
T PLN03234        341 EEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHK  420 (499)
T ss_pred             HHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCC
Confidence            999999999999999999999999987679999999999999999999999999999999999 8999999999997643


Q ss_pred             C--CCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeeccC
Q 010346          435 S--FQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAIPR  512 (512)
Q Consensus       435 ~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (512)
                      .  ....+..|+|||+|+|+|+|+++|++|+++++|.|+++|+|++.++ .++ ..+......++..++++++.+.++.|
T Consensus       421 ~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        421 GVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKG-IKP-EDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCC-CCC-CCCCcccccccccccCCCeEEEeecC
Confidence            2  1234568999999999999999999999999999999999999876 232 33455567788899999999988765


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-81  Score=588.03  Aligned_cols=453  Identities=24%  Similarity=0.360  Sum_probs=360.8

Q ss_pred             CCCCCCCCCcccccccCC--CcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCC--CCcchhh
Q 010346           41 LPPSPPKLPIIGNLHQLG--LFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRP--KLTPFVK  116 (512)
Q Consensus        41 ~ppgp~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~--~~~~~~~  116 (512)
                      -+|||+++|++||+..+.  +.+.....+...+||+++.++.+..+.++|+||+.+++|+.+.-+.|.++.  .......
T Consensus        32 Gi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~  111 (499)
T KOG0158|consen   32 GIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED  111 (499)
T ss_pred             CCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC
Confidence            468999999999998883  333444555555559999999999999999999999999999888888843  3222221


Q ss_pred             hcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHH
Q 010346          117 LLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRI  196 (512)
Q Consensus       117 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  196 (512)
                      .  -...+++...|+.||++|..+ +|.|+.+.++ .+.+.+.+.++++++.+.+....+..+++.+.+.+++.|||+++
T Consensus       112 ~--l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk-~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~  187 (499)
T KOG0158|consen  112 P--LSALNLFFLRGERWKRLRTKL-SPTFTSGKLK-KMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSC  187 (499)
T ss_pred             c--ccccCchhccCchHHHHHHhh-ccccchhhHH-HHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHh
Confidence            1  123567888999999999998 9999999999 99999999999999999975444467899999999999999999


Q ss_pred             HhccccCCCcchHHHHHHHHHHHHHH-hcccc----cchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010346          197 ALGRKYSDQGEVGSKFRKQFKDFIEL-MATFH----VGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMS  271 (512)
Q Consensus       197 ~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (512)
                      +||.+.+...+....+.......... ...+.    ....+|.+....   .......+..+.+.+.+...++.|    +
T Consensus       188 AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l---~~~~~~~~~~~~~~~~v~~~v~~R----~  260 (499)
T KOG0158|consen  188 AFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL---RVKLFPEDVTDFFRKLVNSRVEQR----E  260 (499)
T ss_pred             hcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh---hcccChHHHHHHHHHHHHHHHHHH----H
Confidence            99999998776556665543333333 11111    122233322210   111223333444455555555554    1


Q ss_pred             CCCCCCCCccHHHHHHHhhhc---ccCCC-CCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHH
Q 010346          272 NNSQVEDHKDFIDVLLWLQKE---NILDF-PIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRI  347 (512)
Q Consensus       272 ~~~~~~~~~d~l~~ll~~~~~---~~~~~-~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  347 (512)
                      .  ....+.|+++.+++++.+   +.... .++.+|++++|+.|++||.||||+++++++|+||+|||+|+|||+||+++
T Consensus       261 ~--~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~  338 (499)
T KOG0158|consen  261 K--ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEV  338 (499)
T ss_pred             h--cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence            1  124678999999998854   11112 59999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceec-CeecCCCCEEEeehhhhhcCCCCccCccCCCC
Q 010346          348 VGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKIN-GYDVAAGTQVYINYWAISRDPASWDQAEEFRP  426 (512)
Q Consensus       348 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P  426 (512)
                      ......+++|.+.+|+||++||+||||+||++|.. .|.|++|.+++ |+.||||+.|.+++|++||||++||||++|+|
T Consensus       339 ~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~P  417 (499)
T KOG0158|consen  339 LEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKP  417 (499)
T ss_pred             hcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCC
Confidence            77666699999999999999999999999999984 59999999999 99999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCee
Q 010346          427 ERFLNSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLH  506 (512)
Q Consensus       427 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (512)
                      |||.+++.. ..++.+|+|||.|||+|+|++||.+|+|+.|++||++|+++..+. ..   +.......+.++.|+++++
T Consensus       418 ERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~-t~---~~~~~~~~~~~l~pk~gi~  492 (499)
T KOG0158|consen  418 ERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT-TI---IPLEGDPKGFTLSPKGGIW  492 (499)
T ss_pred             ccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc-cc---CcccCCccceeeecCCceE
Confidence            999987643 346789999999999999999999999999999999999998774 22   1222233378899999999


Q ss_pred             EeeccC
Q 010346          507 ALAIPR  512 (512)
Q Consensus       507 ~~~~~~  512 (512)
                      +++++|
T Consensus       493 Lkl~~r  498 (499)
T KOG0158|consen  493 LKLEPR  498 (499)
T ss_pred             EEEEeC
Confidence            999887


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=9.5e-81  Score=617.18  Aligned_cols=468  Identities=24%  Similarity=0.488  Sum_probs=367.6

Q ss_pred             CCCCCCCCCCCCCCcccccccCCCc--ccHHHHHHHHhhC-CcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCc
Q 010346           36 SSKKSLPPSPPKLPIIGNLHQLGLF--PHRSLGALAQRYG-PLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLT  112 (512)
Q Consensus        36 ~~~~~~ppgp~~~p~lG~~~~~~~~--~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~  112 (512)
                      +++.++||||+++|++||++.+.++  .+.++.+|.++|| +|+++++|+.++|+|+||+.+++|+.++...|.+++...
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            3455679999999999999877432  3678899999999 899999999999999999999999998887788887644


Q ss_pred             chhhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHH
Q 010346          113 PFVKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNI  192 (512)
Q Consensus       113 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  192 (512)
                      .......+..+.++..+|+.|+++|+++..++++..... .+.+.+.++++.+++.+.+...+++++|+.+.+.++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~v  211 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHR-WLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNA  211 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHH
Confidence            332222222345788899999999999855666665555 7778888888888888765444566899999999999999


Q ss_pred             HHHHHhccccCCCc-----chHHHHHHHHHHHHHHhc---ccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 010346          193 VFRIALGRKYSDQG-----EVGSKFRKQFKDFIELMA---TFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQ  264 (512)
Q Consensus       193 i~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  264 (512)
                      +++++||.++....     +...+..+.++.......   ...+.+.+|++.++. ..+..+..++..+.+.+++...++
T Consensus       212 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~  290 (543)
T PLN02971        212 IKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIID  290 (543)
T ss_pred             HHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999874321     111223333333332221   112334556554431 122334556667778888888888


Q ss_pred             HHHhhhcCCCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHH
Q 010346          265 EHENRMSNNSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEV  344 (512)
Q Consensus       265 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  344 (512)
                      ++++..+.+. .....|+++.+++...+++ ...++++++.+++..+++||+|||+++++|++++|++|||+|+|+|+||
T Consensus       291 ~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI  368 (543)
T PLN02971        291 ERIKMWREGK-RTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEI  368 (543)
T ss_pred             HHHHHHhccC-CCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            8765433211 1234699999998653321 1248999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCC
Q 010346          345 RRIVGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEF  424 (512)
Q Consensus       345 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F  424 (512)
                      +++++.++.++.+++.+|||++|||+||||++|++|...+|.+.+|++++||.||||+.|+++.|++||||++|+||++|
T Consensus       369 ~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  448 (543)
T PLN02971        369 DRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSF  448 (543)
T ss_pred             HHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcccc
Confidence            99999888899999999999999999999999999987889999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCC--CCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecC
Q 010346          425 RPERFLNSSIS--FQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRK  502 (512)
Q Consensus       425 ~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (512)
                      +||||++++..  ....+..|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++ .   .++++....+ ++.-+
T Consensus       449 ~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~---~~~~~~~~~~-~~~~~  523 (543)
T PLN02971        449 KPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGS-E---TRVELMESSH-DMFLS  523 (543)
T ss_pred             CcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCC-C---CCcchhhhcC-ccccc
Confidence            99999975422  1124567999999999999999999999999999999999998765 1   2355555556 66555


Q ss_pred             CCeeEeeccC
Q 010346          503 FPLHALAIPR  512 (512)
Q Consensus       503 ~~~~~~~~~~  512 (512)
                      +++.+.++||
T Consensus       524 ~~~~~~~~~~  533 (543)
T PLN02971        524 KPLVMVGELR  533 (543)
T ss_pred             ccceeeeeec
Confidence            5888887776


No 5  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.5e-80  Score=615.53  Aligned_cols=497  Identities=35%  Similarity=0.654  Sum_probs=399.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcccccccCCCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcC
Q 010346           11 QTLFTIAACIFAVFALFKWFLVQPISSKKSLPPSPPKLPIIGNLHQLGLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSS   90 (512)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d   90 (512)
                      +.++.++++++++.+++.+++.++.++..+.||||+++|++||+..+..+++.++.+++++||+++++++|+.++++++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~d   82 (514)
T PLN03112          3 SFLLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDD   82 (514)
T ss_pred             hhHHHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECC
Confidence            35566777777777777777777777777889999999999999888777899999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCcccccCCCCcchhhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhh
Q 010346           91 ADAACEIVRTHDVIFANRPKLTPFVKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIK  170 (512)
Q Consensus        91 p~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~  170 (512)
                      |+.+++|+.++...|.+++..........+..+.++..+|+.|+++|+.+..++|+.+.++ .+.+.+.++++.+++.+.
T Consensus        83 pe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~-~~~~~~~~~~~~lv~~l~  161 (514)
T PLN03112         83 PELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLE-SFAKHRAEEARHLIQDVW  161 (514)
T ss_pred             HHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHH-HhhHHHHHHHHHHHHHHH
Confidence            9999999988777788776543322222333445677789999999999757789999998 888999999999999877


Q ss_pred             cccCCCCCcchHHHHHHHHHHHHHHHHhccccCCCc----chHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhH
Q 010346          171 PFASSSSPIDLSDILFTLTNNIVFRIALGRKYSDQG----EVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNA  246 (512)
Q Consensus       171 ~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~  246 (512)
                      +...+++++|+.+.+.++++++++.++||.++....    +....+.+.+...............+|++.++.. .+..+
T Consensus       162 ~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~  240 (514)
T PLN03112        162 EAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEK  240 (514)
T ss_pred             HhhccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHH
Confidence            544456789999999999999999999999874322    1223455555544433322223344565443311 12335


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHH
Q 010346          247 RLKKTAKEVDDFLEVVIQEHENRMSNNSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWA  326 (512)
Q Consensus       247 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~  326 (512)
                      +.+++.+.+.++++..++++++..+......+..|+++.++++..+++ +..++++++.+++..+++||+|||+++++|+
T Consensus       241 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~  319 (514)
T PLN03112        241 KMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWA  319 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHH
Confidence            667778888889999998877654321112234699999998654321 1358999999999999999999999999999


Q ss_pred             HHHHhhChhHHHHHHHHHHHHhcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEe
Q 010346          327 MTELLRHPEMMEAVQNEVRRIVGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYI  406 (512)
Q Consensus       327 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~  406 (512)
                      +++|++||++|+|+++||++++++++.++.+++.+|||++|||+||+|++|+++..++|.+.+|++++||.|||||.|.+
T Consensus       320 l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~  399 (514)
T PLN03112        320 MAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFI  399 (514)
T ss_pred             HHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEE
Confidence            99999999999999999999998878899999999999999999999999999987779999999999999999999999


Q ss_pred             ehhhhhcCCCCccCccCCCCccccCCCCC----CCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcc
Q 010346          407 NYWAISRDPASWDQAEEFRPERFLNSSIS----FQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQE  482 (512)
Q Consensus       407 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~----~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~  482 (512)
                      ++|++||||++||||++||||||.++...    .......|+|||+|+|.|+|++||++|++++++.|+++|||++.++ 
T Consensus       400 ~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-  478 (514)
T PLN03112        400 NTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDG-  478 (514)
T ss_pred             ehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCC-
Confidence            99999999999999999999998764211    0123457999999999999999999999999999999999998754 


Q ss_pred             cccCccCCCCCCCCceeecCCCeeEeeccC
Q 010346          483 AKGQQRLDVPESNGLTIHRKFPLHALAIPR  512 (512)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (512)
                      .+. .+++.....+++.+++++++++++||
T Consensus       479 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r  507 (514)
T PLN03112        479 LRP-EDIDTQEVYGMTMPKAKPLRAVATPR  507 (514)
T ss_pred             CCc-ccCCCccccCcccccCCCeEEEeecC
Confidence            211 23444555678888888999999987


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2e-80  Score=609.27  Aligned_cols=489  Identities=33%  Similarity=0.652  Sum_probs=388.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCcccccccCCCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHH
Q 010346           13 LFTIAACIFAVFALFKWFLVQPISSKKSLPPSPPKLPIIGNLHQLGLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSAD   92 (512)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~   92 (512)
                      ++-++++.++.++..+++......+..+.||||+++|++||+..+..+++.++.+++++||+|+++++|+.++|+|+||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe   83 (504)
T PLN00110          4 LLELAAATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPE   83 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHH
Confidence            34444444444443333322222344567899999999999988776788999999999999999999999999999999


Q ss_pred             HHHHHHHhcCcccccCCCCcchhhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcc
Q 010346           93 AACEIVRTHDVIFANRPKLTPFVKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPF  172 (512)
Q Consensus        93 ~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~  172 (512)
                      ++++++.++...|.+++..........+..+++++.+|+.|+++|+.+..++|+.+.++ .+.+.+.++++.+++.+.+.
T Consensus        84 ~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~-~~~~~i~~~~~~~~~~l~~~  162 (504)
T PLN00110         84 AARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALE-DWSQVRTVELGHMLRAMLEL  162 (504)
T ss_pred             HHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHH-HhhHHHHHHHHHHHHHHHHh
Confidence            99999998777788877644333333344567788889999999999844689998888 89999999999999998765


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHhccccC-CCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHH
Q 010346          173 ASSSSPIDLSDILFTLTNNIVFRIALGRKYS-DQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKT  251 (512)
Q Consensus       173 ~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~  251 (512)
                      ..+++++|+.+++..+++|+|+.++||.++. ....+..++.+.+...............+|++.++. ..+..++.++.
T Consensus       163 ~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~  241 (504)
T PLN00110        163 SQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERGMKHL  241 (504)
T ss_pred             ccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHHHHHH
Confidence            5567789999999999999999999999872 222233456666665554433333345566554431 12233556667


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHh
Q 010346          252 AKEVDDFLEVVIQEHENRMSNNSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELL  331 (512)
Q Consensus       252 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~  331 (512)
                      .+.+.+++...++++++....   .....|+++.+++...+. .+..++++++.+++..+++||+|||+++++|++++|+
T Consensus       242 ~~~~~~~~~~~i~~~~~~~~~---~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~  317 (504)
T PLN00110        242 HKKFDKLLTRMIEEHTASAHE---RKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEML  317 (504)
T ss_pred             HHHHHHHHHHHHHHHHhhccc---cccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHH
Confidence            778888888888877654322   123468999999754321 2346999999999999999999999999999999999


Q ss_pred             hChhHHHHHHHHHHHHhcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhh
Q 010346          332 RHPEMMEAVQNEVRRIVGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAI  411 (512)
Q Consensus       332 ~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~  411 (512)
                      +||++|+|+++|++++++.++.++.+++++|||++|||+||||++|+++..++|.+.+|++++||.||+|+.|+++.|++
T Consensus       318 ~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~  397 (504)
T PLN00110        318 KNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAI  397 (504)
T ss_pred             hCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHh
Confidence            99999999999999999877789999999999999999999999999998778999999999999999999999999999


Q ss_pred             hcCCCCccCccCCCCccccCCCCCCC---CCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCcc
Q 010346          412 SRDPASWDQAEEFRPERFLNSSISFQ---GHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQR  488 (512)
Q Consensus       412 ~~d~~~~~~p~~F~P~R~l~~~~~~~---~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~  488 (512)
                      ||||++||||++|+||||++++....   .....++|||+|+|.|+|++||++|+++++|+|+++|||++.++     .+
T Consensus       398 h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-----~~  472 (504)
T PLN00110        398 GRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG-----VE  472 (504)
T ss_pred             cCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC-----Cc
Confidence            99999999999999999997532111   12357999999999999999999999999999999999998665     22


Q ss_pred             CCCCCCCCceeecCCCeeEeeccC
Q 010346          489 LDVPESNGLTIHRKFPLHALAIPR  512 (512)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~~~  512 (512)
                      .+.....++++.++.++.+++++|
T Consensus       473 ~~~~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        473 LNMDEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             cCcccccccccccCCCceEeeccC
Confidence            333345678888988999999887


No 7  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.5e-80  Score=611.51  Aligned_cols=469  Identities=38%  Similarity=0.727  Sum_probs=381.6

Q ss_pred             CCCCCCCCCCCCCcccccccCCCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhh
Q 010346           37 SKKSLPPSPPKLPIIGNLHQLGLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVK  116 (512)
Q Consensus        37 ~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~  116 (512)
                      +..+.||||.++|++||+..+..+++.++.+|+++||++|++++|+.++++++||+.+++++.++...|.+++.......
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            34457899999999999988877789999999999999999999999999999999999999887777887765443333


Q ss_pred             hcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHH
Q 010346          117 LLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRI  196 (512)
Q Consensus       117 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  196 (512)
                      ....+.+.+++.+|+.|+++|+.+..++|+.+.++ .+.+.+.++++.+++.+.+. .+++++|+.++++.+++|+++.+
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~-~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~~  188 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALD-DFRHVREEEVALLVRELARQ-HGTAPVNLGQLVNVCTTNALGRA  188 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHH-HhHHHHHHHHHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHHH
Confidence            32223456777889999999999844899999888 99999999999999999753 24568999999999999999999


Q ss_pred             HhccccCCCc--chHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 010346          197 ALGRKYSDQG--EVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNS  274 (512)
Q Consensus       197 ~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  274 (512)
                      +||.++...+  .....+.+.+...............+|++.++. ..+..++..+..+.+.+++...++++++..+.+ 
T Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-  266 (517)
T PLN02687        189 MVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLD-LQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG-  266 (517)
T ss_pred             HhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhC-cccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence            9999875322  223455555555544333322334566554432 122235566777888899999999887654321 


Q ss_pred             CCCCCccHHHHHHHhhhcc---cCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCC
Q 010346          275 QVEDHKDFIDVLLWLQKEN---ILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQK  351 (512)
Q Consensus       275 ~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  351 (512)
                       .....|+++.+++...+.   ..+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++++.+
T Consensus       267 -~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  345 (517)
T PLN02687        267 -SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD  345 (517)
T ss_pred             -CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC
Confidence             123569999999865431   1224699999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccccC
Q 010346          352 SDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLN  431 (512)
Q Consensus       352 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  431 (512)
                      +.++.+++.+||||+|||+||||++|+++...+|.+.+|++++||.||+|+.|.++.|++||||++|+||++|+||||++
T Consensus       346 ~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~  425 (517)
T PLN02687        346 RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLP  425 (517)
T ss_pred             CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCC
Confidence            78999999999999999999999999999877899999999999999999999999999999999999999999999997


Q ss_pred             CCCCC----CCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeE
Q 010346          432 SSISF----QGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHA  507 (512)
Q Consensus       432 ~~~~~----~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (512)
                      ++...    ...+..++|||+|+|.|+|++||++|+++++|+|+++|++++.++ .++ .+++.....++++.+..++.+
T Consensus       426 ~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~  503 (517)
T PLN02687        426 GGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADG-QTP-DKLNMEEAYGLTLQRAVPLMV  503 (517)
T ss_pred             CCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCC-CCc-ccCCcccccceeeecCCCeEE
Confidence            53211    123457999999999999999999999999999999999998765 221 123333455677788889999


Q ss_pred             eeccC
Q 010346          508 LAIPR  512 (512)
Q Consensus       508 ~~~~~  512 (512)
                      +++||
T Consensus       504 ~~~~R  508 (517)
T PLN02687        504 HPRPR  508 (517)
T ss_pred             eeccC
Confidence            99987


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.1e-80  Score=611.65  Aligned_cols=464  Identities=37%  Similarity=0.723  Sum_probs=371.5

Q ss_pred             CCCCCCCCCCCCcccccccCCCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhhh
Q 010346           38 KKSLPPSPPKLPIIGNLHQLGLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVKL  117 (512)
Q Consensus        38 ~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~~  117 (512)
                      ..+.||||+++|++||+..+....+.++.+|+++||++|++++|+.++|+|+||+++++|+.++...|.+++........
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~  113 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYL  113 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhcc
Confidence            34678999999999999877666678899999999999999999999999999999999999877777777654333222


Q ss_pred             cCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHHH
Q 010346          118 LNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRIA  197 (512)
Q Consensus       118 ~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  197 (512)
                      ..+..+++++.+|+.|+++|+.+..++|+.+.++ .+.+. .++++.+++.+..  ..++++|+.+++..+++|++++++
T Consensus       114 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~-~~~~~-~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~~~~  189 (516)
T PLN02183        114 TYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAE-SWASV-RDEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITYRAA  189 (516)
T ss_pred             ccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHH-HHHHH-HHHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHHhHh
Confidence            2223456788899999999999657899998887 77775 4688999999864  346789999999999999999999


Q ss_pred             hccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCC---
Q 010346          198 LGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNS---  274 (512)
Q Consensus       198 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---  274 (512)
                      ||.+.+.   ....+.+.+..+...+........+|++.++. .....++..+..+.+.+++.+.++++.++...+.   
T Consensus       190 fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (516)
T PLN02183        190 FGSSSNE---GQDEFIKILQEFSKLFGAFNVADFIPWLGWID-PQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADN  265 (516)
T ss_pred             hcCcccc---hHHHHHHHHHHHHHHhCCccHHHhcchhHhcc-cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            9987763   23445555555544444333445666654431 1223456777788888888888887765433211   


Q ss_pred             -CCCCCccHHHHHHHhhhccc---------CCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHH
Q 010346          275 -QVEDHKDFIDVLLWLQKENI---------LDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEV  344 (512)
Q Consensus       275 -~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  344 (512)
                       ......|+++.++++..+..         .+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||
T Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei  345 (516)
T PLN02183        266 DSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQEL  345 (516)
T ss_pred             ccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence             11134689999998643211         11358999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCC
Q 010346          345 RRIVGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEF  424 (512)
Q Consensus       345 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F  424 (512)
                      +++++.++.++.+++.+||||+|||+||||++|++|... |.+.+|++++||.|||||.|.++.|++||||++|+||++|
T Consensus       346 ~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F  424 (516)
T PLN02183        346 ADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTF  424 (516)
T ss_pred             HHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCccccCCcccc
Confidence            999987677899999999999999999999999999875 9999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCC-CCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCC
Q 010346          425 RPERFLNSSIS-FQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKF  503 (512)
Q Consensus       425 ~P~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (512)
                      +||||++++.. ....+..|+|||+|+|+|+|++||++|+++++|+|+++|+++..++ .++ ...+.....+++.+...
T Consensus       425 ~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~-~~~-~~~~~~~~~~~~~~~~~  502 (516)
T PLN02183        425 KPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDG-MKP-SELDMNDVFGLTAPRAT  502 (516)
T ss_pred             CchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCC-CCC-CCCChhhccccccccCC
Confidence            99999975431 1224568999999999999999999999999999999999998765 221 12333344455556677


Q ss_pred             CeeEeeccC
Q 010346          504 PLHALAIPR  512 (512)
Q Consensus       504 ~~~~~~~~~  512 (512)
                      ++.+.+++|
T Consensus       503 ~~~~~~~~r  511 (516)
T PLN02183        503 RLVAVPTYR  511 (516)
T ss_pred             CcEEEeecC
Confidence            888888887


No 9  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1e-79  Score=606.61  Aligned_cols=469  Identities=35%  Similarity=0.661  Sum_probs=368.6

Q ss_pred             CCCCCCCCCCCCCCcccccccC-CCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcch
Q 010346           36 SSKKSLPPSPPKLPIIGNLHQL-GLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPF  114 (512)
Q Consensus        36 ~~~~~~ppgp~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~  114 (512)
                      ++..+.||||+++|++||++.+ ..+++.++.+|+++||++|++++|+.++|+++||+.+++|+.++...|.+++.....
T Consensus        25 ~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~  104 (502)
T PLN02966         25 TKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGH  104 (502)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccc
Confidence            3445678999999999999888 446889999999999999999999999999999999999998776667666543322


Q ss_pred             hhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHH
Q 010346          115 VKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVF  194 (512)
Q Consensus       115 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  194 (512)
                      .....+..+..+..+|+.|+++|+.+..++|+.+.+. .+.+.+.++++++++.|.+.+.+++++|+.+++..+++|+++
T Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~-~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~  183 (502)
T PLN02966        105 EFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVA-TFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVC  183 (502)
T ss_pred             eeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHH
Confidence            2222222334455679999999999558999999998 899999999999999998655556789999999999999999


Q ss_pred             HHHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 010346          195 RIALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNS  274 (512)
Q Consensus       195 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  274 (512)
                      .++||.+++...++...+.+.+...........+...+|++..+..+.+..+......+...+++.+.+++..+....  
T Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--  261 (502)
T PLN02966        184 RQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRV--  261 (502)
T ss_pred             HHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc--
Confidence            999999987544333445555444443433333444556443222122222334445566677777777765432111  


Q ss_pred             CCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCC--C
Q 010346          275 QVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQK--S  352 (512)
Q Consensus       275 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~--~  352 (512)
                       ..+..|+++.++++.++...+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++++.+  +
T Consensus       262 -~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~  340 (502)
T PLN02966        262 -KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGST  340 (502)
T ss_pred             -ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCC
Confidence             1234689999997765432234689999999999999999999999999999999999999999999999999753  3


Q ss_pred             CCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCc-cCccCCCCccccC
Q 010346          353 DITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASW-DQAEEFRPERFLN  431 (512)
Q Consensus       353 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~  431 (512)
                      .++.+++++||||+|||+||||++|++|...+|.+.+|++++||.||+||.|++++|++||||++| |||++|+||||++
T Consensus       341 ~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~  420 (502)
T PLN02966        341 FVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLE  420 (502)
T ss_pred             cCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcC
Confidence            579999999999999999999999999987779999999999999999999999999999999999 9999999999997


Q ss_pred             CCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeec
Q 010346          432 SSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAI  510 (512)
Q Consensus       432 ~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (512)
                      ++......+..|+|||+|+|+|+|++||++|+++++|.|+++|+|++.++ .++ +.++.....+++..++.++.++++
T Consensus       421 ~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~  497 (502)
T PLN02966        421 KEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNG-MKP-DDINMDVMTGLAMHKSQHLKLVPE  497 (502)
T ss_pred             CCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCC-CCc-ccCCcccccCeeeccCCCeEEEEE
Confidence            54322234567999999999999999999999999999999999998776 332 234444555666655556766553


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=5.3e-79  Score=600.09  Aligned_cols=452  Identities=25%  Similarity=0.420  Sum_probs=359.5

Q ss_pred             CCCCCCCCCCCCCcccccccCCCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhh
Q 010346           37 SKKSLPPSPPKLPIIGNLHQLGLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVK  116 (512)
Q Consensus        37 ~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~  116 (512)
                      .....+|||+++|++||+..+..+++..+.+++++||+||++++|+.++|+++||+++++|+.++...|.+++.......
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  105 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH  105 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence            33456899999999999988877889999999999999999999999999999999999999877666766665433322


Q ss_pred             hcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHH
Q 010346          117 LLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRI  196 (512)
Q Consensus       117 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  196 (512)
                      ...  ..++++.+|+.|+++|+.+ .+.|+.+.+. .+.+.+.+.++.+++.|.+..+.++.+|+.+++.++++|+++.+
T Consensus       106 ~~~--~~~l~~~~g~~w~~~Rk~~-~~~f~~~~l~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  181 (482)
T PTZ00404        106 GTF--YHGIVTSSGEYWKRNREIV-GKAMRKTNLK-HIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKY  181 (482)
T ss_pred             ecc--CCceeccChHHHHHHHHHH-HHHHhhhccc-cHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHH
Confidence            111  2346677899999999998 8999999998 89999999999999999765445677999999999999999999


Q ss_pred             HhccccCCCcc----hHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 010346          197 ALGRKYSDQGE----VGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSN  272 (512)
Q Consensus       197 ~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (512)
                      +||.+++..++    ....+.+.+...............++++..+  +....+...+..+.+.+++.+.+++++++.+.
T Consensus       182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  259 (482)
T PTZ00404        182 IFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL--YYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP  259 (482)
T ss_pred             HhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            99998864321    1234555555544433322222222222211  11111233455667777777777766543221


Q ss_pred             CCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCCC
Q 010346          273 NSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQKS  352 (512)
Q Consensus       273 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  352 (512)
                          +...|+++.++++..+.   .....+++++++..+++||+|||+++++|++++|++||++|+|+++||+++++++.
T Consensus       260 ----~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~  332 (482)
T PTZ00404        260 ----EVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRN  332 (482)
T ss_pred             ----CCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCC
Confidence                23568999999764321   12233458899999999999999999999999999999999999999999998777


Q ss_pred             CCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCcee-cCeecCCCCEEEeehhhhhcCCCCccCccCCCCccccC
Q 010346          353 DITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKI-NGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLN  431 (512)
Q Consensus       353 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  431 (512)
                      .++.+++++||||+|||+||||++|++|..++|.+.+|+++ +||.||+|+.|+++.+++||||++||||++||||||++
T Consensus       333 ~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~  412 (482)
T PTZ00404        333 KVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLN  412 (482)
T ss_pred             CCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCC
Confidence            78999999999999999999999999997678999999999 99999999999999999999999999999999999997


Q ss_pred             CCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeecc
Q 010346          432 SSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAIP  511 (512)
Q Consensus       432 ~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (512)
                      +.     .+..|+|||+|+|.|+|++||++|++++++.|+++|+++..++     ++.+.....++++. +.++.+++++
T Consensus       413 ~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-----~~~~~~~~~~~~~~-~~~~~v~~~~  481 (482)
T PTZ00404        413 PD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDG-----KKIDETEEYGLTLK-PNKFKVLLEK  481 (482)
T ss_pred             CC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCC-----CCCCcccccceeec-CCCceeeeec
Confidence            52     3467999999999999999999999999999999999988655     22322334566666 5578888887


Q ss_pred             C
Q 010346          512 R  512 (512)
Q Consensus       512 ~  512 (512)
                      |
T Consensus       482 R  482 (482)
T PTZ00404        482 R  482 (482)
T ss_pred             C
Confidence            7


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1e-77  Score=594.23  Aligned_cols=465  Identities=29%  Similarity=0.559  Sum_probs=355.7

Q ss_pred             CCCCCCCCCCCCCcccccccCCCc-ccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchh
Q 010346           37 SKKSLPPSPPKLPIIGNLHQLGLF-PHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFV  115 (512)
Q Consensus        37 ~~~~~ppgp~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~  115 (512)
                      ++.+.||||+++|++|++..+..+ .+..+.+|+++||+|+++++|+.++|+|+||+.+++|+.++...|.+++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            345678999999999999888654 5789999999999999999999999999999999999987766677665443333


Q ss_pred             hhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccC-CCCCcchHHHHHHHHHHHHH
Q 010346          116 KLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFAS-SSSPIDLSDILFTLTNNIVF  194 (512)
Q Consensus       116 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~~vi~  194 (512)
                      ...+.+.+.+++.+|+.|+++|+.+..++|+.+.+. .+.+.+.++++++++.+.+... .++.+|+.+.+..+++|+++
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~-~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~  185 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQ-QYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMY  185 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHH-HhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHH
Confidence            333334456778889999999999855999988887 8889999999999999975432 24569999999999999999


Q ss_pred             HHHhccccCCCcchH-HHHHHHHHHHHHHhcc--cccchhhhhhhhhhhccchhHHHHHHHHHHHH-HHHHHHHHHHhhh
Q 010346          195 RIALGRKYSDQGEVG-SKFRKQFKDFIELMAT--FHVGDYIPWLGWICYFSGLNARLKKTAKEVDD-FLEVVIQEHENRM  270 (512)
Q Consensus       195 ~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~  270 (512)
                      +++||.+++...+.. ..+.............  ..+...+|++...  +....+........... +....++++++..
T Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        186 RMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987532211 1222222222111111  1122334443321  11111222222222222 3334556554432


Q ss_pred             cCC-CCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhc
Q 010346          271 SNN-SQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVG  349 (512)
Q Consensus       271 ~~~-~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  349 (512)
                      +.. ...+...|+++.++++..+    ..++++++..++..+++||+||||++++|++++|++||++|+||++||+++++
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~  339 (503)
T PLN02394        264 SAKGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLG  339 (503)
T ss_pred             hhccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            211 1112346899999976543    25899999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccc
Q 010346          350 QKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERF  429 (512)
Q Consensus       350 ~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~  429 (512)
                      .++.++.+++++||||+|||+||||++|++|...+|.+.+|++++||.||+||.|.+++|++||||++||||++||||||
T Consensus       340 ~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRw  419 (503)
T PLN02394        340 PGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERF  419 (503)
T ss_pred             CCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCcccc
Confidence            77778999999999999999999999999999888999999999999999999999999999999999999999999999


Q ss_pred             cCCCCC--CCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCC-CceeecCCCee
Q 010346          430 LNSSIS--FQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESN-GLTIHRKFPLH  506 (512)
Q Consensus       430 l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  506 (512)
                      ++++..  .......|+|||+|+|+|+|++||++|+++++|.|+++|++++.++ .+   .++..... +.....+.++.
T Consensus       420 l~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~  495 (503)
T PLN02394        420 LEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPG-QS---KIDVSEKGGQFSLHIAKHST  495 (503)
T ss_pred             CCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCC-CC---cCccccccCceeeccCCCce
Confidence            975421  1223567999999999999999999999999999999999998765 21   23333223 35665666899


Q ss_pred             EeeccC
Q 010346          507 ALAIPR  512 (512)
Q Consensus       507 ~~~~~~  512 (512)
                      +++.||
T Consensus       496 ~~~~~r  501 (503)
T PLN02394        496 VVFKPR  501 (503)
T ss_pred             EEeecC
Confidence            988887


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=3.8e-77  Score=590.15  Aligned_cols=466  Identities=24%  Similarity=0.438  Sum_probs=364.1

Q ss_pred             CCCCCCCCCCCCCcccccccCC---CcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcc
Q 010346           37 SKKSLPPSPPKLPIIGNLHQLG---LFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTP  113 (512)
Q Consensus        37 ~~~~~ppgp~~~p~lG~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~  113 (512)
                      +..++||||+++|++||+..+.   .+++.++.+|+++||++|++++|+.++|+|+||+.+++++.++...|.+++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            3456789999999999987653   3467889999999999999999999999999999999999887777877765432


Q ss_pred             hhhhcCCCccee-eccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHH
Q 010346          114 FVKLLNGCIDVS-MAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNI  192 (512)
Q Consensus       114 ~~~~~~~~~~~~-~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  192 (512)
                      ..... ...+.+ +..+|+.|+++||.+..++|+.+.++ .+.+.+.++++.+++.+.+....++.+|+.+.+..++.++
T Consensus       112 ~~~~~-~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~-~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        112 SRLLG-ESDNTITRSSYGPVWRLLRRNLVAETLHPSRVR-LFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCL  189 (519)
T ss_pred             hhhhc-cCCCceeCCCCCHHHHHHHHHHHHhccCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence            22221 111222 23689999999986569999999998 9999999999999999986544455789999999999999


Q ss_pred             HHHHHhccccCCCcchHHHHHHHHHHHHHHh-cccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010346          193 VFRIALGRKYSDQGEVGSKFRKQFKDFIELM-ATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMS  271 (512)
Q Consensus       193 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (512)
                      ++.++||.+++..  ....+...+....... ....+...+|++.+.. .....++..++.+.+.+++...++++++..+
T Consensus       190 i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (519)
T PLN00168        190 LVLMCFGERLDEP--AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFVPLIDARREYKN  266 (519)
T ss_pred             HHHHHcCCCcChh--hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999988631  1122223332222111 1222334455433211 1122345566778889999999988766431


Q ss_pred             C----CCCC----CCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHH
Q 010346          272 N----NSQV----EDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNE  343 (512)
Q Consensus       272 ~----~~~~----~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  343 (512)
                      .    +...    ....|+++.|++.......+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       267 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~E  346 (519)
T PLN00168        267 HLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDE  346 (519)
T ss_pred             hccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            1    0000    1146899999976543222246999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCC-CCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCcc
Q 010346          344 VRRIVGQK-SDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAE  422 (512)
Q Consensus       344 i~~~~~~~-~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  422 (512)
                      |+++++++ +.++.+++.+||||+|||+||+|++|+++...+|.+.+|++++||.||||+.|.++++++||||++||||+
T Consensus       347 i~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~  426 (519)
T PLN00168        347 IKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPM  426 (519)
T ss_pred             HHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcc
Confidence            99999864 57899999999999999999999999999887899999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCC-----CCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCc
Q 010346          423 EFRPERFLNSSIS-----FQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGL  497 (512)
Q Consensus       423 ~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (512)
                      +|+||||++++..     ....+..|+|||+|+|+|+|++||++|+++++++|+++|+|++.++     ...+.....++
T Consensus       427 ~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-----~~~~~~~~~~~  501 (519)
T PLN00168        427 EFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPG-----DEVDFAEKREF  501 (519)
T ss_pred             ccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCC-----CcCChhhhcee
Confidence            9999999974311     1113457999999999999999999999999999999999998765     22333333455


Q ss_pred             eeecCCCeeEeeccC
Q 010346          498 TIHRKFPLHALAIPR  512 (512)
Q Consensus       498 ~~~~~~~~~~~~~~~  512 (512)
                      +..++.++.+++++|
T Consensus       502 ~~~~~~~~~~~~~~R  516 (519)
T PLN00168        502 TTVMAKPLRARLVPR  516 (519)
T ss_pred             EEeecCCcEEEEEec
Confidence            666777888888776


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.5e-77  Score=591.70  Aligned_cols=451  Identities=22%  Similarity=0.359  Sum_probs=354.7

Q ss_pred             CCCCCCCCCCCcccccccCCC-------------------cccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHH
Q 010346           39 KSLPPSPPKLPIIGNLHQLGL-------------------FPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVR   99 (512)
Q Consensus        39 ~~~ppgp~~~p~lG~~~~~~~-------------------~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~   99 (512)
                      ...||||+++|++||++.+..                   .....+.+|+++||+++++++|+.+.|+++||+.+++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            345899999999999877632                   2223578899999999999999999999999999999998


Q ss_pred             hcCcccccCCCCcchh-hhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCC-C
Q 010346          100 THDVIFANRPKLTPFV-KLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSS-S  177 (512)
Q Consensus       100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~  177 (512)
                      ++.. +..++...... ....|  ++++..+|+.|+++|+.+ .+.|+.+.++ .+.+.+.++++.+++.+.+..+.+ +
T Consensus       121 ~~~~-~~~r~~~~~~~~~~~~g--~~l~~~~g~~Wk~~Rk~~-~~~f~~~~l~-~~~~~i~~~~~~l~~~l~~~~~~~~~  195 (516)
T PLN02290        121 KYNT-VTGKSWLQQQGTKHFIG--RGLLMANGADWYHQRHIA-APAFMGDRLK-GYAGHMVECTKQMLQSLQKAVESGQT  195 (516)
T ss_pred             cCCC-CCCCcchhhhHHHHHhc--CCccccCchHHHHHHhhc-ccccCHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            7633 44444322111 11112  345667899999999998 8999999988 899999999999999998644333 5


Q ss_pred             CcchHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHH
Q 010346          178 PIDLSDILFTLTNNIVFRIALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDD  257 (512)
Q Consensus       178 ~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  257 (512)
                      ++|+.+++..+++|++++++||.++...    ..+.+.++..............+|++.+++  .+..+..++..+.+.+
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~~~~  269 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKG----KQIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGEVER  269 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccc----hHHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHHHHH
Confidence            7999999999999999999999987632    222233322222211111111234333221  2233556667788899


Q ss_pred             HHHHHHHHHHhhhcCCCCCCCCccHHHHHHHhhhcc-cCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhH
Q 010346          258 FLEVVIQEHENRMSNNSQVEDHKDFIDVLLWLQKEN-ILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEM  336 (512)
Q Consensus       258 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~  336 (512)
                      ++.+.++++++..+.+.......|+++.+++...+. ..+..++++++.+++..+++||+|||+++++|++++|++||++
T Consensus       270 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~v  349 (516)
T PLN02290        270 LLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTW  349 (516)
T ss_pred             HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHH
Confidence            999999988765433221223579999999764322 1223588999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCC
Q 010346          337 MEAVQNEVRRIVGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPA  416 (512)
Q Consensus       337 ~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~  416 (512)
                      |+|+|+||+++++.+ .++.+++++||||+|||+||||++|+++. .+|.+.+|++++||.||+||.|.++.|++||||+
T Consensus       350 q~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~  427 (516)
T PLN02290        350 QDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEE  427 (516)
T ss_pred             HHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChh
Confidence            999999999999875 78999999999999999999999999996 5799999999999999999999999999999999


Q ss_pred             Cc-cCccCCCCccccCCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCC
Q 010346          417 SW-DQAEEFRPERFLNSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESN  495 (512)
Q Consensus       417 ~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  495 (512)
                      +| +||++||||||++++.   .....|+|||+|+|.|+|++||++|+++++++|+++|++++.++ .+      .....
T Consensus       428 ~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~-~~------~~~~~  497 (516)
T PLN02290        428 LWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDN-YR------HAPVV  497 (516)
T ss_pred             hhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCC-cc------cCccc
Confidence            99 8999999999996431   13357999999999999999999999999999999999998765 21      12223


Q ss_pred             CceeecCCCeeEeeccC
Q 010346          496 GLTIHRKFPLHALAIPR  512 (512)
Q Consensus       496 ~~~~~~~~~~~~~~~~~  512 (512)
                      +++..|+.++.+++++|
T Consensus       498 ~~~~~p~~~~~~~~~~~  514 (516)
T PLN02290        498 VLTIKPKYGVQVCLKPL  514 (516)
T ss_pred             eeeecCCCCCeEEEEeC
Confidence            68888999999988776


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.1e-77  Score=582.41  Aligned_cols=453  Identities=32%  Similarity=0.549  Sum_probs=362.3

Q ss_pred             CCCCCCCCCCCCcccccccCCC---cccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcch
Q 010346           38 KKSLPPSPPKLPIIGNLHQLGL---FPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPF  114 (512)
Q Consensus        38 ~~~~ppgp~~~p~lG~~~~~~~---~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~  114 (512)
                      ....||||.++|++|++..+.+   ....++.++..+||++++.|+||.++|+++||+.+++|+.++.....+.+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            3456799999999999998843   4567889999999999999999999999999999999997555545555555533


Q ss_pred             hhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHH
Q 010346          115 VKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVF  194 (512)
Q Consensus       115 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  194 (512)
                      .....|. +.+++ +|+.|+++|+++ .++|+...++ .+...+.+.+..++..+..... ++.+|+.+.++++++|+|+
T Consensus       113 ~~~~lG~-gll~~-~g~~W~~~Rk~~-~~~f~~~~L~-~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPWLGD-GLLFS-DGEKWHKHRKLL-TPAFHFEILK-SFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHhcC-ccccC-CchHHHHHHhhc-cHhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHH
Confidence            3333332 44444 499999999997 9999999998 8888888888887877775332 3339999999999999999


Q ss_pred             HHHhcccc-CCCcchHHHHHHHHHHHHHHhcccccchhhh-hhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 010346          195 RIALGRKY-SDQGEVGSKFRKQFKDFIELMATFHVGDYIP-WLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSN  272 (512)
Q Consensus       195 ~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (512)
                      .++||... +...+...++.++++.....+...   ...| +..++.... ..++.+++.+.+++++++.|+++++..++
T Consensus       188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~-~~~~~~~a~~~~~~~~~~iI~~rr~~~~~  263 (497)
T KOG0157|consen  188 KTAMGPESLDAEGPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLK-SERKLKKARKILHDFLEKIIRERREELEK  263 (497)
T ss_pred             HHhcCCccccccCCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999222 222233345556665544443322   2334 333332222 66889999999999999999999877654


Q ss_pred             CCCC--CCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcC
Q 010346          273 NSQV--EDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQ  350 (512)
Q Consensus       273 ~~~~--~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  350 (512)
                      ....  ....|+++.+.....     ..++++++++++.+|++||+||||++++|++++|+.||++|+|+++|++++++.
T Consensus       264 ~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~  338 (497)
T KOG0157|consen  264 EGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGN  338 (497)
T ss_pred             cCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC
Confidence            3222  345788886332221     479999999999999999999999999999999999999999999999999985


Q ss_pred             CCC-CCccccccChhHHHHHHhhcCCCCCCCCCCccccccCcee-cCeecCCCCEEEeehhhhhcCCCCcc-CccCCCCc
Q 010346          351 KSD-ITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKI-NGYDVAAGTQVYINYWAISRDPASWD-QAEEFRPE  427 (512)
Q Consensus       351 ~~~-~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~P~  427 (512)
                      +.. .+..+..+|+||++||+||||||||+|... |.+.+|+++ +||.||||+.|.++++++|||+++|+ ||++||||
T Consensus       339 ~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~Pe  417 (497)
T KOG0157|consen  339 RDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPE  417 (497)
T ss_pred             CCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-cccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCcc
Confidence            433 233333369999999999999999999776 999999999 58999999999999999999999995 99999999


Q ss_pred             cccCCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeE
Q 010346          428 RFLNSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHA  507 (512)
Q Consensus       428 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (512)
                      ||++++.....++++|+|||+|+|.|+|++||++|+|+++++++++|+|++..+     ..  ......+++++++++.+
T Consensus       418 Rf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~-----~~--~~~~~~~~l~~~~gl~v  490 (497)
T KOG0157|consen  418 RFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGG-----DK--PKPVPELTLRPKNGLKV  490 (497)
T ss_pred             ccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCC-----CC--ceeeeEEEEEecCCeEE
Confidence            999764333446789999999999999999999999999999999999998776     11  45667899999999999


Q ss_pred             eeccC
Q 010346          508 LAIPR  512 (512)
Q Consensus       508 ~~~~~  512 (512)
                      ++++|
T Consensus       491 ~~~~r  495 (497)
T KOG0157|consen  491 KLRPR  495 (497)
T ss_pred             EEEeC
Confidence            99887


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=6.1e-75  Score=570.96  Aligned_cols=465  Identities=23%  Similarity=0.439  Sum_probs=350.2

Q ss_pred             CCCCCCCCCCcccccccCC-Cccc-HHHHHHHHhh-CCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhh
Q 010346           40 SLPPSPPKLPIIGNLHQLG-LFPH-RSLGALAQRY-GPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVK  116 (512)
Q Consensus        40 ~~ppgp~~~p~lG~~~~~~-~~~~-~~~~~~~~ky-G~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~  116 (512)
                      ..||||+++|++||++.+. ..+. .++.++.++| |+||++++|+.++|+|+||+.+++++.++...|.+++.......
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~  119 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET  119 (534)
T ss_pred             CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence            3689999999999998873 2332 4566667766 79999999999999999999999999987777888776544333


Q ss_pred             hcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHH
Q 010346          117 LLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRI  196 (512)
Q Consensus       117 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  196 (512)
                      ...+..+..+..+|+.|+++|+++ .+.|........+.....++++.+++.+.+....++++|+.+.+.++++|+++++
T Consensus       120 l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        120 IGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            322223455556799999999998 6665444433255566667788999998754445567999999999999999999


Q ss_pred             HhccccCCCcc---hHHH----HHHHHHHHHHHhc---ccccchhhh-hhhhhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 010346          197 ALGRKYSDQGE---VGSK----FRKQFKDFIELMA---TFHVGDYIP-WLGWICYFSGLNARLKKTAKEVDDFLEVVIQE  265 (512)
Q Consensus       197 ~fG~~~~~~~~---~~~~----~~~~~~~~~~~~~---~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  265 (512)
                      +||.++.....   ....    +...+........   .....+.+| ++.++. ..+...+.....+.+.+++.+.+++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  277 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYNNPIIDE  277 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence            99998753211   0011    1112222222111   111222333 332111 1122344555567788888888888


Q ss_pred             HHhhhcCCCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHH
Q 010346          266 HENRMSNNSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVR  345 (512)
Q Consensus       266 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  345 (512)
                      +++...+........|+++.++....+.+ +..++++++++++..+++||+|||+++++|++++|+.||++|+|+++||+
T Consensus       278 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  356 (534)
T PLN03018        278 RVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELD  356 (534)
T ss_pred             HHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            76543221111124689999997654321 11489999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCC
Q 010346          346 RIVGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFR  425 (512)
Q Consensus       346 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  425 (512)
                      ++++.++.++.+++.+|||++|||+||||++|++|...+|.+.+|++++||.||||+.|+++.|++||||++|+||++|+
T Consensus       357 ~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~  436 (534)
T PLN03018        357 EVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYE  436 (534)
T ss_pred             HHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccC
Confidence            99987778999999999999999999999999999877799999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCC-----CCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceee
Q 010346          426 PERFLNSSISF-----QGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIH  500 (512)
Q Consensus       426 P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (512)
                      ||||++++...     ...+..++|||+|+|.|+|++||++|+++++++|+++|+|++.++ .   .++++....+++..
T Consensus       437 PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~---~~~~~~~~~~~~~~  512 (534)
T PLN03018        437 PERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQD-F---GPLSLEEDDASLLM  512 (534)
T ss_pred             CccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCC-C---CCCCccccccceec
Confidence            99999754211     123467999999999999999999999999999999999997654 1   12333333344444


Q ss_pred             cCCCeeEeeccC
Q 010346          501 RKFPLHALAIPR  512 (512)
Q Consensus       501 ~~~~~~~~~~~~  512 (512)
                       +.++.++++||
T Consensus       513 -p~~~~v~~~~R  523 (534)
T PLN03018        513 -AKPLLLSVEPR  523 (534)
T ss_pred             -CCCeEEEEEec
Confidence             46888888887


No 16 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.3e-75  Score=571.82  Aligned_cols=452  Identities=29%  Similarity=0.508  Sum_probs=357.9

Q ss_pred             CCCCCCCCcccccccCC-CcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhhhcCC
Q 010346           42 PPSPPKLPIIGNLHQLG-LFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVKLLNG  120 (512)
Q Consensus        42 ppgp~~~p~lG~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~~~~~  120 (512)
                      ||||+++|++||++.+. .+++.++.+|+++||+||++++|+.++|+|+||+.+++|+.++...|.+++.........++
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998885 45889999999999999999999999999999999999998877777777654333323222


Q ss_pred             CcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccC--CCCCcchHHHHHHHHHHHHHHHHh
Q 010346          121 CIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFAS--SSSPIDLSDILFTLTNNIVFRIAL  198 (512)
Q Consensus       121 ~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~~~f  198 (512)
                      +.......+|+.|+++||.+..++|+....+ .+.+.+.+.++.+++.+.+...  .+++||+.+.++++++|+++.++|
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  159 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQK-RFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQAL  159 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHH-HhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHh
Confidence            2223333468999999998767888877776 8888888888888888865432  457899999999999999999999


Q ss_pred             ccccCCCcchH--------HHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 010346          199 GRKYSDQGEVG--------SKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRM  270 (512)
Q Consensus       199 G~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  270 (512)
                      |.+++......        ..+...+...........+...+|.+.++.. ....+...+....+.++++..+++++++.
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  238 (466)
T PLN02655        160 GEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRI  238 (466)
T ss_pred             ccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99876532111        1122223333333222233346675554421 11223333344455677788888776653


Q ss_pred             cCCCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcC
Q 010346          271 SNNSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQ  350 (512)
Q Consensus       271 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  350 (512)
                      ..+   .+..|+++.++...      ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||++++++
T Consensus       239 ~~~---~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~  309 (466)
T PLN02655        239 ARG---EERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD  309 (466)
T ss_pred             cCC---CCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC
Confidence            331   23458999999653      258999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCcccc
Q 010346          351 KSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFL  430 (512)
Q Consensus       351 ~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  430 (512)
                      +. ++.+++.++||++|||+||||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+
T Consensus       310 ~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~  388 (466)
T PLN02655        310 ER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFL  388 (466)
T ss_pred             CC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccC
Confidence            55 89999999999999999999999999988789999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeec
Q 010346          431 NSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAI  510 (512)
Q Consensus       431 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (512)
                      +++... .....++|||+|+|.|||++||++|+++++++|+++|+|++.++ ..     ......+++..+++++.++++
T Consensus       389 ~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~  461 (466)
T PLN02655        389 GEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREG-DE-----EKEDTVQLTTQKLHPLHAHLK  461 (466)
T ss_pred             CCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCC-Cc-----cccchhheeEeecCCcEEEEe
Confidence            764221 23467999999999999999999999999999999999998765 11     112345778888889999887


Q ss_pred             cC
Q 010346          511 PR  512 (512)
Q Consensus       511 ~~  512 (512)
                      +|
T Consensus       462 ~r  463 (466)
T PLN02655        462 PR  463 (466)
T ss_pred             ec
Confidence            76


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.1e-75  Score=574.69  Aligned_cols=420  Identities=20%  Similarity=0.318  Sum_probs=329.3

Q ss_pred             cCCCCCCCCCCCCCCCcccccccCC-----CcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccC
Q 010346           34 PISSKKSLPPSPPKLPIIGNLHQLG-----LFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANR  108 (512)
Q Consensus        34 ~~~~~~~~ppgp~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~  108 (512)
                      ..++..+.||||+++|++||++.+.     +.++.++.+++++||+++++++|+.++|+++||+++++|+.++...|.++
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            3344556799999999999976442     34567889999999999999999999999999999999998776656443


Q ss_pred             CCCcchhhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHH
Q 010346          109 PKLTPFVKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTL  188 (512)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  188 (512)
                      .... ..... +. ..++..+|+.|+++|+++ .+.|+...++..+.+.+.+.+..+++.+.    .++.+|+.+.++++
T Consensus       112 ~~~~-~~~~~-g~-~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~  183 (490)
T PLN02500        112 YPRS-IGGIL-GK-WSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKF  183 (490)
T ss_pred             CchH-HHHHh-Cc-ccccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHH
Confidence            2211 11122 22 235556899999999998 79999888872256677777777777765    24579999999999


Q ss_pred             HHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 010346          189 TNNIVFRIALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHEN  268 (512)
Q Consensus       189 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  268 (512)
                      ++|++++++||.+.+..  ....+.+.+.........  ....+|..        ..++..++.+.+.+++.+.++++++
T Consensus       184 ~~~vi~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~~~~  251 (490)
T PLN02500        184 TFNLMAKHIMSMDPGEE--ETEQLKKEYVTFMKGVVS--APLNFPGT--------AYRKALKSRATILKFIERKMEERIE  251 (490)
T ss_pred             HHHHHHHHHhCCCCCch--HHHHHHHHHHHHHhhhhc--chhcCCCc--------ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876531  223333333333222111  00112211        1245556778888889999888766


Q ss_pred             hhcCCCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHh
Q 010346          269 RMSNNSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIV  348 (512)
Q Consensus       269 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  348 (512)
                      ....+.......|+++.+++.       ..++++++++++..+++||+|||+++++|++++|++|||+|+|+++|++++.
T Consensus       252 ~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~  324 (490)
T PLN02500        252 KLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIA  324 (490)
T ss_pred             hhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Confidence            443222112346899998863       2589999999999999999999999999999999999999999999999987


Q ss_pred             c-----CCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccC
Q 010346          349 G-----QKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEE  423 (512)
Q Consensus       349 ~-----~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  423 (512)
                      +     .+..++.+|+.+|||++|||+||||++|++|.. +|.+.+|++++||.||||+.|+++.|++||||++|+||++
T Consensus       325 ~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~  403 (490)
T PLN02500        325 RAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQL  403 (490)
T ss_pred             hccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccc
Confidence            4     234689999999999999999999999999975 6999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCCCCC------CCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCc
Q 010346          424 FRPERFLNSSISFQ------GHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQ  481 (512)
Q Consensus       424 F~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~  481 (512)
                      ||||||++++....      ..+..|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++
T Consensus       404 F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~  467 (490)
T PLN02500        404 FNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEA  467 (490)
T ss_pred             cChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCC
Confidence            99999997542111      13567999999999999999999999999999999999998665


No 18 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.4e-74  Score=525.64  Aligned_cols=449  Identities=25%  Similarity=0.394  Sum_probs=374.4

Q ss_pred             CCCCCCCCCcccccccC----CCcccHHHHHHHHhhCCcEEEe-eCCeeEEEEcCHHHHHHHHHhcCcccccCC-CCcch
Q 010346           41 LPPSPPKLPIIGNLHQL----GLFPHRSLGALAQRYGPLMLLH-LGKVPVLVVSSADAACEIVRTHDVIFANRP-KLTPF  114 (512)
Q Consensus        41 ~ppgp~~~p~lG~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~-~~~~~  114 (512)
                      .+|||+++|++|..+.+    ..+.|+.....+++|||||+.. +|+...|+|.||+.++.+|+++.. +..++ .....
T Consensus        51 ~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~w  129 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEPW  129 (519)
T ss_pred             hcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccchh
Confidence            47999999999998844    2467899999999999999999 889999999999999999987653 55564 21111


Q ss_pred             --hhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccC---CCCCcchHHHHHHHH
Q 010346          115 --VKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFAS---SSSPIDLSDILFTLT  189 (512)
Q Consensus       115 --~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~~  189 (512)
                        ..-..++..+++..+|+.|++.|..+....++++.++ .|.+.+++.+++++..+....+   ...+.|+.+.+.+++
T Consensus       130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~-~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws  208 (519)
T KOG0159|consen  130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVR-RYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS  208 (519)
T ss_pred             hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHH-HHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence              1122345566788899999999999988889999999 9999999999999999997655   334789999999999


Q ss_pred             HHHHHHHHhccccCCCcc----hHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 010346          190 NNIVFRIALGRKYSDQGE----VGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQE  265 (512)
Q Consensus       190 ~~vi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  265 (512)
                      ++.|+.++||.+++....    +...+.++++.++.....+.+..  ++++++  .++.++++.++.+.+.+++...|++
T Consensus       209 lEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p--~l~r~~--~t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  209 LESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMP--SLWRYF--PTKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcc--hHHHhC--CChHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987543    33456666666665544433221  333333  4566789999999999999999999


Q ss_pred             HHhhhcCCCCC-CCCc-cHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHH
Q 010346          266 HENRMSNNSQV-EDHK-DFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNE  343 (512)
Q Consensus       266 ~~~~~~~~~~~-~~~~-d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  343 (512)
                      ..+..+.+... .+.. .+...|..        ..++.+++..+++.++.||.||||+++.|+||+|++||++|++|++|
T Consensus       285 ~l~~l~~~~~~~~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~E  356 (519)
T KOG0159|consen  285 ALEELEKQDSAGSEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREE  356 (519)
T ss_pred             HHHHHHhccccccchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHH
Confidence            88877653321 1222 33333332        25889999999999999999999999999999999999999999999


Q ss_pred             HHHHhcC-CCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCcc
Q 010346          344 VRRIVGQ-KSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAE  422 (512)
Q Consensus       344 i~~~~~~-~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  422 (512)
                      +.++.++ +..++.+++.++|||.||||||+||||.+|+.. |...+|..++||.|||||.|.++.+.+.+||++|++|+
T Consensus       357 i~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~  435 (519)
T KOG0159|consen  357 ILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPE  435 (519)
T ss_pred             HHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCCcc
Confidence            9999988 678999999999999999999999999999876 99999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecC
Q 010346          423 EFRPERFLNSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRK  502 (512)
Q Consensus       423 ~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (512)
                      +|+|||||+++. ...++..++|||.|+|+|+|+++|.+|+.++||+++++|+++..++       .++......++.|.
T Consensus       436 ~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~-------~pv~~~~~~il~P~  507 (519)
T KOG0159|consen  436 EFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE-------EPVEYVYRFILVPN  507 (519)
T ss_pred             ccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC-------CCccceeEEEEcCC
Confidence            999999999863 3457899999999999999999999999999999999999998775       24456677888899


Q ss_pred             CCeeEeeccC
Q 010346          503 FPLHALAIPR  512 (512)
Q Consensus       503 ~~~~~~~~~~  512 (512)
                      .++.+++++|
T Consensus       508 ~~l~f~f~~r  517 (519)
T KOG0159|consen  508 RPLRFKFRPR  517 (519)
T ss_pred             CCcceeeeeC
Confidence            9999999886


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=5.3e-74  Score=562.55  Aligned_cols=450  Identities=16%  Similarity=0.282  Sum_probs=340.4

Q ss_pred             CCCCCCCCcccccccCCCcc---cHHHHHHHHhhCCcEE---EeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchh
Q 010346           42 PPSPPKLPIIGNLHQLGLFP---HRSLGALAQRYGPLML---LHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFV  115 (512)
Q Consensus        42 ppgp~~~p~lG~~~~~~~~~---~~~~~~~~~kyG~v~~---~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~  115 (512)
                      .|||+++|++||+..+.++.   ++++.+...+||..++   +|+|+.++|+|+||+.+++|+.++...|.+++......
T Consensus        33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~  112 (500)
T PLN02169         33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIF  112 (500)
T ss_pred             CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHH
Confidence            58999999999997663332   2334444445886655   68899999999999999999987766566554322222


Q ss_pred             hhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhh-hHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHH
Q 010346          116 KLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYS-FRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVF  194 (512)
Q Consensus       116 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  194 (512)
                      .. . + ++++..+|+.|+++|+++ .++|+...+... +.+.+.+.++.+++.+.+.+.+++++|+.+.+.++++|+|+
T Consensus       113 ~~-~-g-~gl~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~  188 (500)
T PLN02169        113 DV-L-G-EGILTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSS  188 (500)
T ss_pred             Hh-h-c-CcccccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHH
Confidence            21 1 2 456677899999999998 899998866521 22556677788888887654566789999999999999999


Q ss_pred             HHHhccccCCCcch--HHHHHHHHHHHHHHhcccccchhhhhhhh-h-hhc-cchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 010346          195 RIALGRKYSDQGEV--GSKFRKQFKDFIELMATFHVGDYIPWLGW-I-CYF-SGLNARLKKTAKEVDDFLEVVIQEHENR  269 (512)
Q Consensus       195 ~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~  269 (512)
                      +++||.+.+.....  ...+.+.++........   ...+|++.+ + .++ .+..++..++.+.+++++.+.|+++++.
T Consensus       189 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~  265 (500)
T PLN02169        189 ILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKE  265 (500)
T ss_pred             hheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987643211  13444444333322111   112233221 1 111 3345778888999999999999988764


Q ss_pred             hcCC-CCCCCCccHHHHHHHhhhcc-cCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHH
Q 010346          270 MSNN-SQVEDHKDFIDVLLWLQKEN-ILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRI  347 (512)
Q Consensus       270 ~~~~-~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  347 (512)
                      ..+. ...+..+|+++.+++..... ..+..++++++.+++.++++||+|||+++++|++++|++|||+|+|+++||+++
T Consensus       266 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v  345 (500)
T PLN02169        266 EISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK  345 (500)
T ss_pred             hhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh
Confidence            2211 11112468999998764321 111247889999999999999999999999999999999999999999999987


Q ss_pred             hcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCce-ecCeecCCCCEEEeehhhhhcCCCCc-cCccCCC
Q 010346          348 VGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVK-INGYDVAAGTQVYINYWAISRDPASW-DQAEEFR  425 (512)
Q Consensus       348 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~-~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~  425 (512)
                      +      +.+++.+||||+|||+||||+||++|... |.+.+|.+ ++||.||||+.|++++|++||||++| |||++||
T Consensus       346 ~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~  418 (500)
T PLN02169        346 F------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFK  418 (500)
T ss_pred             C------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcC
Confidence            4      57899999999999999999999999886 66666655 59999999999999999999999999 8999999


Q ss_pred             CccccCCCCCCC-CCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCC
Q 010346          426 PERFLNSSISFQ-GHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFP  504 (512)
Q Consensus       426 P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (512)
                      ||||++++.... ..+..|+|||+|+|+|+|++||++|+++++++|+++|++++.++     .++  ....++++.++++
T Consensus       419 PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~-----~~~--~~~~~~~l~~~~g  491 (500)
T PLN02169        419 PERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEG-----HKI--EAIPSILLRMKHG  491 (500)
T ss_pred             ccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCC-----CCc--ccccceEEecCCC
Confidence            999997643221 23678999999999999999999999999999999999988654     222  3455688899999


Q ss_pred             eeEeeccC
Q 010346          505 LHALAIPR  512 (512)
Q Consensus       505 ~~~~~~~~  512 (512)
                      +.+++++|
T Consensus       492 l~l~l~~~  499 (500)
T PLN02169        492 LKVTVTKK  499 (500)
T ss_pred             EEEEEEeC
Confidence            99998876


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=7.1e-74  Score=567.56  Aligned_cols=452  Identities=20%  Similarity=0.292  Sum_probs=343.1

Q ss_pred             CCCCCCCCcccccccCCCcccHHHHHHHHhh---CCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhhhc
Q 010346           42 PPSPPKLPIIGNLHQLGLFPHRSLGALAQRY---GPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVKLL  118 (512)
Q Consensus        42 ppgp~~~p~lG~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~~~  118 (512)
                      +|||+++|++||++.+..+ +..+.+|.++|   |++|++++|+.+.|+++||+.+++|+.++...|.+...+.......
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  110 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL  110 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH
Confidence            5999999999998765333 44567888888   8999999999999999999999999987644455443221111111


Q ss_pred             CCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHH-HHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHHH
Q 010346          119 NGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVR-VEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRIA  197 (512)
Q Consensus       119 ~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  197 (512)
                      . + +++++.+|+.|+++|+.+ +++|+.+.++ .+.+.+ .+.++.+++.+.+...+++++|+.+++..+++|+++.++
T Consensus       111 ~-g-~~l~~~~g~~w~~~Rr~l-~~~fs~~~l~-~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        111 L-G-DGIFNVDGELWRKQRKTA-SFEFASKNLR-DFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             h-c-CeeeccCcHHHHHHHHhc-chhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence            1 2 346667899999999998 8999998888 787765 566777777776533446689999999999999999999


Q ss_pred             hccccCCCcch--HHHHHHHHHHHHHHhcccccchhhhhh--hhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 010346          198 LGRKYSDQGEV--GSKFRKQFKDFIELMATFHVGDYIPWL--GWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNN  273 (512)
Q Consensus       198 fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  273 (512)
                      ||.+++..+++  ...+.+.++......... .  ..|..  ..+. .....+...+..+.+.+++.+.+++++++....
T Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        187 FGVEIGTLSPSLPENPFAQAFDTANIIVTLR-F--IDPLWKLKKFL-NIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             hCCCccccccCCCccHHHHHHHHHHHHHHHH-H--hcchhhHHHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99998754321  123444443332211100 0  11211  1110 111224456677788889999998877654321


Q ss_pred             C--CCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcC-
Q 010346          274 S--QVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQ-  350 (512)
Q Consensus       274 ~--~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-  350 (512)
                      +  ......|+++.+++...+.  +..++++++++++..+++||+|||+++++|++++|++||++|+||++||++++++ 
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        263 RKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             ccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence            1  1123568999999754332  2468999999999999999999999999999999999999999999999998743 


Q ss_pred             -------------------CCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCcee-cCeecCCCCEEEeehhh
Q 010346          351 -------------------KSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKI-NGYDVAAGTQVYINYWA  410 (512)
Q Consensus       351 -------------------~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~  410 (512)
                                         ++.++++++.+||||+|||+||||++|++|... |.+.+|..+ +||.||||+.|.++.|+
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             cccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHh
Confidence                               245889999999999999999999999999875 667666665 99999999999999999


Q ss_pred             hhcCCCCc-cCccCCCCccccCCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccC
Q 010346          411 ISRDPASW-DQAEEFRPERFLNSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRL  489 (512)
Q Consensus       411 ~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~  489 (512)
                      +||||++| |||++|+||||++++......+..|+|||+|+|+|+|++||++|++++++.|+++|++++.++     .+.
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~-----~~~  494 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPG-----HPV  494 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCC-----Ccc
Confidence            99999999 999999999999643211234567999999999999999999999999999999999998654     112


Q ss_pred             CCCCCCCceeecCCCeeEeeccC
Q 010346          490 DVPESNGLTIHRKFPLHALAIPR  512 (512)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~  512 (512)
                        ......+..|+.++.+++++|
T Consensus       495 --~~~~~~~~~~~~~~~v~~~~r  515 (516)
T PLN03195        495 --KYRMMTILSMANGLKVTVSRR  515 (516)
T ss_pred             --eeeeeeEEecCCCEEEEEEeC
Confidence              223345677888999998876


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4e-75  Score=575.81  Aligned_cols=433  Identities=32%  Similarity=0.577  Sum_probs=358.2

Q ss_pred             CCCCCCCCcccccccCC--CcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhh-hc
Q 010346           42 PPSPPKLPIIGNLHQLG--LFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVK-LL  118 (512)
Q Consensus        42 ppgp~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~-~~  118 (512)
                      ||||+++|++||++.+.  ++++.++.+++++||+||++++++.++++|+||+.+++|+.++...+..++....... ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999985  6788999999999999999999999999999999999999887655555433222222 11


Q ss_pred             CCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHHHh
Q 010346          119 NGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRIAL  198 (512)
Q Consensus       119 ~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~f  198 (512)
                      ......++..+|+.|+.+|+.+ .+.|+..... .+.+.+.+.++.+++.+.+....++.+|+.++++.+++|+++.++|
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f  158 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF  158 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence            1122446667789999999998 7888877334 7889999999999999998666556899999999999999999999


Q ss_pred             ccccCCCcch-HHHHHHHHHHHHHHhccc--ccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 010346          199 GRKYSDQGEV-GSKFRKQFKDFIELMATF--HVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNSQ  275 (512)
Q Consensus       199 G~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (512)
                      |.+++..++. ...+.+.++.....+...  .....+|++.++  .....+...++.+.+.+++...++++++....+  
T Consensus       159 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--  234 (463)
T PF00067_consen  159 GKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL--PTPLFRRFKRARDRLRKYIKEIIEERREELDDG--  234 (463)
T ss_dssp             SSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS--
T ss_pred             cceeeeccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccc--
Confidence            9998744333 345666666665544221  233455544433  233456777788899999999999988877653  


Q ss_pred             CCCCccHHHHHHHhh-hcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCCCCC
Q 010346          276 VEDHKDFIDVLLWLQ-KENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQKSDI  354 (512)
Q Consensus       276 ~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  354 (512)
                      .....|+++.++... ...+ +..++.+++.+++..+++||+|||+++++|++++|++||++|+++++||+++.++++.+
T Consensus       235 ~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  313 (463)
T PF00067_consen  235 DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREI  313 (463)
T ss_dssp             SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSH
T ss_pred             cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            235689999999886 2221 14799999999999999999999999999999999999999999999999999777789


Q ss_pred             CccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccccCCCC
Q 010346          355 TEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLNSSI  434 (512)
Q Consensus       355 ~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  434 (512)
                      +.+++++||||+|||+||+|++|+++..++|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++++.
T Consensus       314 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~  393 (463)
T PF00067_consen  314 TFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG  393 (463)
T ss_dssp             HHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999777799999999999999999999999999999999999999999999999865


Q ss_pred             CCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCc
Q 010346          435 SFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQ  481 (512)
Q Consensus       435 ~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~  481 (512)
                      .....+..|+|||.|+|.|+|++||++|+++++|+||++|||++.++
T Consensus       394 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~  440 (463)
T PF00067_consen  394 ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPG  440 (463)
T ss_dssp             TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTT
T ss_pred             ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCC
Confidence            22346778999999999999999999999999999999999999654


No 22 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=3.2e-73  Score=554.67  Aligned_cols=432  Identities=21%  Similarity=0.301  Sum_probs=339.2

Q ss_pred             CCCCCCCCCCCCCcccccccCCCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhh
Q 010346           37 SKKSLPPSPPKLPIIGNLHQLGLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVK  116 (512)
Q Consensus        37 ~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~  116 (512)
                      +..+.||||+++|++||++.+.++++.++++++++||+++++++|+.++++++||+.+++++.++...+..+.. .....
T Consensus        28 ~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~~~~  106 (463)
T PLN02774         28 SKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QSMLD  106 (463)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HHHHH
Confidence            34467899999999999988877778899999999999999999999999999999999999876655543322 11212


Q ss_pred             hcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHH
Q 010346          117 LLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRI  196 (512)
Q Consensus       117 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  196 (512)
                      .. |. ++++..+|+.|+++|+.+ .++|+...++..+.+.+.+.+++++++|.    .++++|+.+.+..+++++++.+
T Consensus       107 ~l-g~-~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~  179 (463)
T PLN02774        107 IL-GT-CNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALKQ  179 (463)
T ss_pred             Hh-Cc-cchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHHH
Confidence            22 22 345566899999999998 78999888762367888888888888775    2357999999999999999999


Q ss_pred             HhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 010346          197 ALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNSQV  276 (512)
Q Consensus       197 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  276 (512)
                      +||.+...   ....+.+.+.....  ....+...+|.        ...++..++.+.+.+++.+.++++++..      
T Consensus       180 ~~g~~~~~---~~~~~~~~~~~~~~--~~~~~~~~lp~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~~------  240 (463)
T PLN02774        180 IAGTLSKP---ISEEFKTEFFKLVL--GTLSLPIDLPG--------TNYRSGVQARKNIVRMLRQLIQERRASG------  240 (463)
T ss_pred             HcCCCChH---HHHHHHHHHHHHhc--ccccCCcCCCC--------hhhhHHHHHHHHHHHHHHHHHHHHHhcC------
Confidence            99976542   11223322222211  01111111111        1124556677888889998888876431      


Q ss_pred             CCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcC---CCC
Q 010346          277 EDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQ---KSD  353 (512)
Q Consensus       277 ~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~  353 (512)
                      ...+|+++.++....+   +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.   ++.
T Consensus       241 ~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~  317 (463)
T PLN02774        241 ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDP  317 (463)
T ss_pred             CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCC
Confidence            2346999999874322   2358999999999999999999999999999999999999999999999999864   356


Q ss_pred             CCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccccCCC
Q 010346          354 ITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLNSS  433 (512)
Q Consensus       354 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  433 (512)
                      ++++++.+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++++.+||||++|+||++|+||||++++
T Consensus       318 ~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~  396 (463)
T PLN02774        318 IDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKS  396 (463)
T ss_pred             CCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCC
Confidence            89999999999999999999999999855 59999999999999999999999999999999999999999999999754


Q ss_pred             CCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeecc
Q 010346          434 ISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAIP  511 (512)
Q Consensus       434 ~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (512)
                      ..   ....|+|||+|+|.|||++||++|++++++.|+++|++++.++     .+.  ..  ..++.|++++.++++|
T Consensus       397 ~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~-----~~~--~~--~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        397 LE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGG-----DKL--MK--FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             cC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCC-----Ccc--cc--CCCCCCCCCceEEeee
Confidence            21   1235999999999999999999999999999999999998765     111  11  1123367888888765


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.8e-72  Score=558.85  Aligned_cols=441  Identities=23%  Similarity=0.363  Sum_probs=337.6

Q ss_pred             cccccC-CCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhhhcCCCcceeeccCC
Q 010346           52 GNLHQL-GLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVKLLNGCIDVSMAPYG  130 (512)
Q Consensus        52 G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  130 (512)
                      ||+..+ ++..+..+.++|++|||||++++|+.++|+|+||+.+++||..+...|.+++..... .... + ..++..+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~-~~~~-g-~~l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEIL-EFVM-G-KGLIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHH-hhcc-C-CceecCCc
Confidence            443344 455778899999999999999999999999999999999998766556655332111 1111 2 24566789


Q ss_pred             hhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHHHhccccCCCcchHH
Q 010346          131 EYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRIALGRKYSDQGEVGS  210 (512)
Q Consensus       131 ~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~  210 (512)
                      +.|+++|+.+ .++|+.+.+. .+.+.+.+.++.+++++.+...+++++|+...+..+++|+|+.++||.+++...+. .
T Consensus       220 e~wr~rRr~l-~p~Fs~~~v~-~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~-~  296 (633)
T PLN02738        220 EIWRVRRRAI-VPALHQKYVA-AMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND-T  296 (633)
T ss_pred             HHHHHHHHhc-cHhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc-h
Confidence            9999999998 8999999888 89999999999999999876566789999999999999999999999998754322 2


Q ss_pred             HHHHHHHHHHHHhcccccchhhhhhhhh-hhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-------CCCCCCccH
Q 010346          211 KFRKQFKDFIELMATFHVGDYIPWLGWI-CYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNN-------SQVEDHKDF  282 (512)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~d~  282 (512)
                      .+.+.+................+|...+ ..+.+..++..++.+.+.++....++.+++..++.       .......|+
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~di  376 (633)
T PLN02738        297 GIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSI  376 (633)
T ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchH
Confidence            2333333322221111111111221111 11112224455555666666666665543322110       001234589


Q ss_pred             HHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCCCCCCccccccC
Q 010346          283 IDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQKSDITEEDLNDM  362 (512)
Q Consensus       283 l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l  362 (512)
                      ++.|+...      ..++++++.+++..+++||+|||+++++|++++|++||++|+|||+||++++++ +.++++++++|
T Consensus       377 l~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kL  449 (633)
T PLN02738        377 LHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKL  449 (633)
T ss_pred             HHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccC
Confidence            99988642      258899999999999999999999999999999999999999999999999984 67899999999


Q ss_pred             hhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccccCCCC--CCCCCc
Q 010346          363 HYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLNSSI--SFQGHD  440 (512)
Q Consensus       363 p~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~--~~~~~~  440 (512)
                      |||+|||+|+||++|+++... |.+.+|.+++||.||+||.|+++.|.+||||++||||++|+||||+++..  ......
T Consensus       450 PYL~AVIkEtLRL~p~~p~~~-R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~  528 (633)
T PLN02738        450 KYTTRVINESLRLYPQPPVLI-RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQN  528 (633)
T ss_pred             HHHHHHHHHHHhcCCCccccc-eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCC
Confidence            999999999999999999865 88999999999999999999999999999999999999999999985321  112245


Q ss_pred             ceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeeccC
Q 010346          441 VQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAIPR  512 (512)
Q Consensus       441 ~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (512)
                      ..|+|||.|+|.|+|++||++|+++++|+|+++|+|++.++ .     .++....+.++.++.++.+++++|
T Consensus       529 ~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~-~-----~~~~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        529 FSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPG-A-----PPVKMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             CceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCC-C-----CCcccccceEEeeCCCcEEEEEEC
Confidence            67999999999999999999999999999999999998765 1     122333456777888888888766


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.2e-72  Score=548.22  Aligned_cols=425  Identities=21%  Similarity=0.323  Sum_probs=340.7

Q ss_pred             CCCCCCCCCCCCCcccccccC-CCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchh
Q 010346           37 SKKSLPPSPPKLPIIGNLHQL-GLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFV  115 (512)
Q Consensus        37 ~~~~~ppgp~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~  115 (512)
                      +....||||+++|++||+..+ .++++.++.+++++||+++++++++.++|+++||+.+++|+.++...|.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            344668899899999998865 5688999999999999999999999999999999999999987765552  3322222


Q ss_pred             hhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHH
Q 010346          116 KLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFR  195 (512)
Q Consensus       116 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  195 (512)
                      ....| ..+++..+|+.|+++|+++ .+.|+.+.++ .+.+.+.+.++++++.|.     ++++|+.++++.+++++++.
T Consensus       110 ~~~~g-~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~-~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~  181 (463)
T PLN02196        110 ERMLG-KQAIFFHQGDYHAKLRKLV-LRAFMPDAIR-NMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALL  181 (463)
T ss_pred             HHHcC-cccccccCcHHHHHHHHHH-HHhcChHHHH-HHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHH
Confidence            22222 2356667899999999998 7899999988 899999999999998774     34699999999999999999


Q ss_pred             HHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 010346          196 IALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNSQ  275 (512)
Q Consensus       196 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  275 (512)
                      ++||.+....   ...+.+.+..+....      ..+|+.  +  .....++..++.+.+.+++.+.++++++..     
T Consensus       182 ~~fG~~~~~~---~~~~~~~~~~~~~~~------~~~~~~--~--p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----  243 (463)
T PLN02196        182 SIFGKDEVLY---REDLKRCYYILEKGY------NSMPIN--L--PGTLFHKSMKARKELAQILAKILSKRRQNG-----  243 (463)
T ss_pred             HHcCCCCchH---HHHHHHHHHHHhcch------hccccc--C--CCccchHHHHHHHHHHHHHHHHHHHHhhcC-----
Confidence            9999875421   122222222211111      112221  1  011225566778888899988888776431     


Q ss_pred             CCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcC---CC
Q 010346          276 VEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQ---KS  352 (512)
Q Consensus       276 ~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~  352 (512)
                       .+..|+++.+++.   +   ..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++.+.   ++
T Consensus       244 -~~~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~  316 (463)
T PLN02196        244 -SSHNDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGE  316 (463)
T ss_pred             -CCcccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCC
Confidence             2346899988752   1   368999999999999999999999999999999999999999999999999864   35


Q ss_pred             CCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccccCC
Q 010346          353 DITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLNS  432 (512)
Q Consensus       353 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  432 (512)
                      .++.++++++||++|||+||+|++|+++... |.+.+|++++||.||||+.|+++++++||||++|+||++|+||||+++
T Consensus       317 ~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~  395 (463)
T PLN02196        317 SLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVA  395 (463)
T ss_pred             CCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCC
Confidence            7899999999999999999999999999875 999999999999999999999999999999999999999999999964


Q ss_pred             CCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeec
Q 010346          433 SISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAI  510 (512)
Q Consensus       433 ~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (512)
                      .     .+..++|||+|+|.|+|+++|++|++++++.|+++|++++.++      +.+  .....+..|+.++.++++
T Consensus       396 ~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~------~~~--~~~~~~~~p~~~~~~~~~  460 (463)
T PLN02196        396 P-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGT------SNG--IQYGPFALPQNGLPIALS  460 (463)
T ss_pred             C-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCC------CCc--eEEcccccCCCCceEEEe
Confidence            2     3467999999999999999999999999999999999998654      112  223334457777777664


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.1e-71  Score=542.78  Aligned_cols=435  Identities=21%  Similarity=0.315  Sum_probs=340.3

Q ss_pred             CCCCCCCCCCCCCcccccccC-----CCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCC
Q 010346           37 SKKSLPPSPPKLPIIGNLHQL-----GLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKL  111 (512)
Q Consensus        37 ~~~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~  111 (512)
                      ++.+.||||.++|++||++.+     ..+++.++.+++++||+||++++|+.++|+++||++++++|.++...|..+.. 
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~-   82 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP-   82 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc-
Confidence            456678999999999999876     24688999999999999999999999999999999999999887766654421 


Q ss_pred             cchhhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHH
Q 010346          112 TPFVKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNN  191 (512)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  191 (512)
                      ....... | .+.++..+|+.|+++|+++ .+.|+...+.....+.+.+.++++++.+.    .++++|+.+.+..++++
T Consensus        83 ~~~~~l~-g-~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  155 (452)
T PLN03141         83 KSLTELM-G-KSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAFE  155 (452)
T ss_pred             hhHHHHh-C-cccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHHH
Confidence            1122222 2 2346667899999999997 78887776652345566666666666553    35679999999999999


Q ss_pred             HHHHHHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 010346          192 IVFRIALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMS  271 (512)
Q Consensus       192 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (512)
                      ++++++||.+.+.   +...+.+.+..+.......  ...+|..        ...+..++.+.+.+++...|+++++..+
T Consensus       156 vi~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~~~~~  222 (452)
T PLN03141        156 VLVKALISLEPGE---EMEFLKKEFQEFIKGLMSL--PIKLPGT--------RLYRSLQAKKRMVKLVKKIIEEKRRAMK  222 (452)
T ss_pred             HHHHHHcCCCchH---HHHHHHHHHHHHhhhHHhC--ccCCCch--------HhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999986642   2233333333332221111  1111211        1134456788899999999988876543


Q ss_pred             CCCCC--CCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhc
Q 010346          272 NNSQV--EDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVG  349 (512)
Q Consensus       272 ~~~~~--~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  349 (512)
                      .+...  ....|+++.+++..     +..+++++++.++..+++||+|||+++++|++++|+.||++|+++++|++++.+
T Consensus       223 ~~~~~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~  297 (452)
T PLN03141        223 NKEEDETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKR  297 (452)
T ss_pred             ccCccccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHh
Confidence            21100  12468999988653     135899999999999999999999999999999999999999999999998864


Q ss_pred             ----CCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCC
Q 010346          350 ----QKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFR  425 (512)
Q Consensus       350 ----~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  425 (512)
                          .+..++.+++.+||||+|||+|++|++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+
T Consensus       298 ~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~  376 (452)
T PLN03141        298 LKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFN  376 (452)
T ss_pred             ccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccC
Confidence                23457899999999999999999999999984 5699999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCe
Q 010346          426 PERFLNSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPL  505 (512)
Q Consensus       426 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (512)
                      ||||++++.    .+..|+|||+|+|.|+|++||++|+++++|.|+++|+++..++     ...     ...++.|+.++
T Consensus       377 PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~-----~~~-----~~~~~~~~~~~  442 (452)
T PLN03141        377 PWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEED-----TIV-----NFPTVRMKRKL  442 (452)
T ss_pred             cccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCC-----Cee-----ecccccCCCCc
Confidence            999997632    3567999999999999999999999999999999999987655     111     12477788888


Q ss_pred             eEeeccC
Q 010346          506 HALAIPR  512 (512)
Q Consensus       506 ~~~~~~~  512 (512)
                      .+++++|
T Consensus       443 ~~~~~~~  449 (452)
T PLN03141        443 PIWVTRI  449 (452)
T ss_pred             eEEEEeC
Confidence            8888776


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.3e-70  Score=543.48  Aligned_cols=436  Identities=23%  Similarity=0.338  Sum_probs=339.5

Q ss_pred             CCCCCCCCCCCCcccccccC-----CCcccHHHHHHHHhhCC--cEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCC
Q 010346           38 KKSLPPSPPKLPIIGNLHQL-----GLFPHRSLGALAQRYGP--LMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPK  110 (512)
Q Consensus        38 ~~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~  110 (512)
                      ..+.||||+++|++||++.+     ..++++++.+++++||+  ++++++++.+.++++||+.+++|+.++ ..|.++..
T Consensus        40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~  118 (490)
T PLN02302         40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP  118 (490)
T ss_pred             CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence            34578999999999998876     34678899999999997  799999999999999999999999865 44544322


Q ss_pred             CcchhhhcCCCcceeeccCChhHHHHHHHHHHhhcC-chhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHH
Q 010346          111 LTPFVKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLS-NKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLT  189 (512)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  189 (512)
                      .....  ..| .+.+...+|+.|+++|+.+ .+.|+ .+.++ .+.+.+.+.++++++.+..    ++.+|+.+.+..++
T Consensus       119 ~~~~~--~~g-~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~-~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~  189 (490)
T PLN02302        119 ESTVE--LIG-RKSFVGITGEEHKRLRRLT-AAPVNGPEALS-TYIPYIEENVKSCLEKWSK----MGEIEFLTELRKLT  189 (490)
T ss_pred             hhHHH--Hhc-cccccccCcHHHHHHHHHH-HhccCCHHHHH-HHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHHH
Confidence            21111  122 2334556899999999998 77774 66777 8999999999999998863    34699999999999


Q ss_pred             HHHHHHHHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 010346          190 NNIVFRIALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENR  269 (512)
Q Consensus       190 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  269 (512)
                      ++++++++||.+.+.   ....+.+.+......+...  ...+|..        ..++..++.+.+.+++.+.++++++.
T Consensus       190 ~~vi~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~~~  256 (490)
T PLN02302        190 FKIIMYIFLSSESEL---VMEALEREYTTLNYGVRAM--AINLPGF--------AYHRALKARKKLVALFQSIVDERRNS  256 (490)
T ss_pred             HHHHHHHHcCCCChH---HHHHHHHHHHHHHHHhhhC--CcCCCch--------hhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999987653   1222222222221111111  0112211        11344556678888888888887655


Q ss_pred             hcCCCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhc
Q 010346          270 MSNNSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVG  349 (512)
Q Consensus       270 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  349 (512)
                      .+.+. ..+..|+++.+++...++  +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       257 ~~~~~-~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~  333 (490)
T PLN02302        257 RKQNI-SPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAK  333 (490)
T ss_pred             hhccC-CCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHh
Confidence            43211 124579999999865432  235899999999999999999999999999999999999999999999999986


Q ss_pred             CCC----CCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCC
Q 010346          350 QKS----DITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFR  425 (512)
Q Consensus       350 ~~~----~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  425 (512)
                      ...    .++++++++||||+|||+|++|++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+
T Consensus       334 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~  412 (490)
T PLN02302        334 KRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFD  412 (490)
T ss_pred             cCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccC
Confidence            422    378999999999999999999999999976 599999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCe
Q 010346          426 PERFLNSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPL  505 (512)
Q Consensus       426 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (512)
                      ||||++++    ..+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++ .     .++..  .....|..++
T Consensus       413 PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~-----~~~~~--~~~~~p~~~~  480 (490)
T PLN02302        413 PSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP-G-----CKVMY--LPHPRPKDNC  480 (490)
T ss_pred             hhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC-C-----Cccee--CCCCCCCCCc
Confidence            99999753    23467999999999999999999999999999999999998754 1     11222  2235666677


Q ss_pred             eEeeccC
Q 010346          506 HALAIPR  512 (512)
Q Consensus       506 ~~~~~~~  512 (512)
                      .+++++|
T Consensus       481 ~~~~~~~  487 (490)
T PLN02302        481 LARITKV  487 (490)
T ss_pred             eEEEEec
Confidence            7766554


No 27 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.8e-71  Score=545.08  Aligned_cols=451  Identities=23%  Similarity=0.356  Sum_probs=353.2

Q ss_pred             CCCCCCCCCcccccccC-----CCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchh
Q 010346           41 LPPSPPKLPIIGNLHQL-----GLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFV  115 (512)
Q Consensus        41 ~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~  115 (512)
                      +=.|..+||++|+.+.+     ++.++..+.+|+++||||+++++|+.+.++++||+++++|+.+....|.+++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            33677899999999877     4667899999999999999999999999999999999999987656676654322211


Q ss_pred             hhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhH-HHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHH
Q 010346          116 KLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFR-DVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVF  194 (512)
Q Consensus       116 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  194 (512)
                       ...+  +.++..+|+.|+++|+.+ .+.|+.+.+. .+. +++.++++.+++.+.+...+++++|+.+++.++++|+++
T Consensus        93 -~~~~--~~i~~~~g~~wk~~Rk~l-~~~f~~~~l~-~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         93 -FLFG--SGFAIAEGELWTARRRAV-VPSLHRRYLS-VMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             -HHhc--CccccCCchHHHHHHHhh-cCccCHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence             1112  345667899999999998 8999887776 554 477888999999998765566789999999999999999


Q ss_pred             HHHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhh--hhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 010346          195 RIALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGW--ICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSN  272 (512)
Q Consensus       195 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (512)
                      .++||.+++....+ .++.+.+......... .....+|++.+  +....+..++..++.+.+.+++.+.++++++..++
T Consensus       168 ~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~  245 (489)
T PLN02936        168 LSVFNYNFDSLTTD-SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEA  245 (489)
T ss_pred             HHHcCCCccccccC-cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999864322 2333333332222111 11123343221  11112233566777788888888888877654332


Q ss_pred             CCC--------CCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHH
Q 010346          273 NSQ--------VEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEV  344 (512)
Q Consensus       273 ~~~--------~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  344 (512)
                      ...        .....|+++.|+...      ..++.+++.++++.+++||+|||+++++|++++|++||++|+|+|+|+
T Consensus       246 ~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei  319 (489)
T PLN02936        246 EGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEEL  319 (489)
T ss_pred             cccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            110        012467899888643      247899999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCC
Q 010346          345 RRIVGQKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEF  424 (512)
Q Consensus       345 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F  424 (512)
                      +++++. +.++.+++.+||||+|||+||||++||++...+|.+.+|+.++||.||+|+.|+++.+++||||++||||++|
T Consensus       320 ~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F  398 (489)
T PLN02936        320 DRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEF  398 (489)
T ss_pred             HHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCcccc
Confidence            999885 4578999999999999999999999999988877777888889999999999999999999999999999999


Q ss_pred             CCccccCCCCC--CCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecC
Q 010346          425 RPERFLNSSIS--FQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRK  502 (512)
Q Consensus       425 ~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (512)
                      +||||++++..  ....+..|+|||.|+|.|+|++||++|+++++++|+++|++++.++     +++  ....+++..++
T Consensus       399 ~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~-----~~~--~~~~~~~~~~~  471 (489)
T PLN02936        399 VPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPD-----QDI--VMTTGATIHTT  471 (489)
T ss_pred             CccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCC-----Ccc--ceecceEEeeC
Confidence            99999975321  1123457999999999999999999999999999999999998765     222  22345677788


Q ss_pred             CCeeEeeccC
Q 010346          503 FPLHALAIPR  512 (512)
Q Consensus       503 ~~~~~~~~~~  512 (512)
                      .++.+++++|
T Consensus       472 ~~~~v~~~~R  481 (489)
T PLN02936        472 NGLYMTVSRR  481 (489)
T ss_pred             CCeEEEEEee
Confidence            8999998876


No 28 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.6e-69  Score=528.41  Aligned_cols=440  Identities=20%  Similarity=0.262  Sum_probs=337.6

Q ss_pred             CCCcccccccCCCcccHHHHHHHHhhC-CcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhhhcCCCccee
Q 010346           47 KLPIIGNLHQLGLFPHRSLGALAQRYG-PLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVKLLNGCIDVS  125 (512)
Q Consensus        47 ~~p~lG~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (512)
                      ..++.|++.....+.++++..+.++++ .+++++..+.  ++++||+.+++|+..+...|.+...+........|  +++
T Consensus        48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g--~gi  123 (502)
T PLN02426         48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG--RGI  123 (502)
T ss_pred             CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC--Cce
Confidence            355778876644445677777888887 5778776654  89999999999998775556655433222111122  346


Q ss_pred             eccCChhHHHHHHHHHHhhcCchhhhhhhH--HHHHHHHHHHHHHhhcccC--CCCCcchHHHHHHHHHHHHHHHHhccc
Q 010346          126 MAPYGEYLRKVKSLFVVQLLSNKMIHYSFR--DVRVEEVALMIQKIKPFAS--SSSPIDLSDILFTLTNNIVFRIALGRK  201 (512)
Q Consensus       126 ~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~~~fG~~  201 (512)
                      ++.+|+.|+++||.+ ++.|+...++ .+.  ..+.+.++.+++.+.+.++  +++++|+.++++++++|+|+.++||.+
T Consensus       124 ~~~~g~~wk~~Rk~l-~~~fs~~~l~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  201 (502)
T PLN02426        124 FNVDGDSWRFQRKMA-SLELGSVSIR-SYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD  201 (502)
T ss_pred             eecCcHHHHHHHHHh-HhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence            778899999999998 8999988887 553  5667777788888775432  246799999999999999999999999


Q ss_pred             cCCCcc--hHHHHHHHHHHHHHHhcccccchhhhhhhhhh-hc-cchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 010346          202 YSDQGE--VGSKFRKQFKDFIELMATFHVGDYIPWLGWIC-YF-SGLNARLKKTAKEVDDFLEVVIQEHENRMSNNSQVE  277 (512)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  277 (512)
                      ++..+.  ...++.+.++......... ....+|++.++. .+ .+..++..++.+.+.+++.+.|+++++...     +
T Consensus       202 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-----~  275 (502)
T PLN02426        202 PGCLELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-----S  275 (502)
T ss_pred             CcccCCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc-----C
Confidence            875432  2234555554433221110 111223222111 11 233466778888999999999998865421     1


Q ss_pred             CCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCC-CCCCc
Q 010346          278 DHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQK-SDITE  356 (512)
Q Consensus       278 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~  356 (512)
                      ...|+++.+++..        .+++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++.+.+ ..+++
T Consensus       276 ~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~  347 (502)
T PLN02426        276 ASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASF  347 (502)
T ss_pred             CcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCH
Confidence            3569999998642        26789999999999999999999999999999999999999999999998764 36899


Q ss_pred             cccccChhHHHHHHhhcCCCCCCCCCCccccccCcee-cCeecCCCCEEEeehhhhhcCCCCc-cCccCCCCccccCCCC
Q 010346          357 EDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKI-NGYDVAAGTQVYINYWAISRDPASW-DQAEEFRPERFLNSSI  434 (512)
Q Consensus       357 ~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~  434 (512)
                      +++.+||||+|||+||||++||+|... |.+.+|.++ +||.||+||.|.++.|++||||++| |||++|+||||++++.
T Consensus       348 ~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~  426 (502)
T PLN02426        348 EEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV  426 (502)
T ss_pred             HHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC
Confidence            999999999999999999999999775 999988887 9999999999999999999999999 9999999999997532


Q ss_pred             CCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEeeccC
Q 010346          435 SFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALAIPR  512 (512)
Q Consensus       435 ~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (512)
                      .....+..++|||+|+|.|+|++||++|++++++.|+++|+++..++ .    ........+++..+++++.+++++|
T Consensus       427 ~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~-~----~~~~~~~~~~~~~~~~gl~v~~~~r  499 (502)
T PLN02426        427 FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGR-S----NRAPRFAPGLTATVRGGLPVRVRER  499 (502)
T ss_pred             cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecC-C----CCCCcccceeEEecCCCEEEEEEEc
Confidence            11224567999999999999999999999999999999999998543 1    1112334568899999999998876


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.7e-69  Score=525.54  Aligned_cols=431  Identities=21%  Similarity=0.309  Sum_probs=332.7

Q ss_pred             CCCCCCCCCCCcccccccCC-----CcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcc
Q 010346           39 KSLPPSPPKLPIIGNLHQLG-----LFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTP  113 (512)
Q Consensus        39 ~~~ppgp~~~p~lG~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~  113 (512)
                      ..+||||.++|++||++.+.     .+++.++.+++++||+++++++++.++|+|+||+.+++++.++...|.++... .
T Consensus        29 ~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~-~  107 (472)
T PLN02987         29 MRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPG-S  107 (472)
T ss_pred             CCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcH-H
Confidence            34689999999999998762     45788899999999999999999999999999999999998877666554321 1


Q ss_pred             hhhhcCCCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhH-HHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHH
Q 010346          114 FVKLLNGCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFR-DVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNI  192 (512)
Q Consensus       114 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  192 (512)
                      ..... |+ ++++..+|+.|+++|+++ .++++.+.+. .+. ..+.+.++..++.|.      +++|+.+.++++++++
T Consensus       108 ~~~~l-g~-~~l~~~~g~~wr~~R~~~-~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~t~~v  177 (472)
T PLN02987        108 ISNLL-GK-HSLLLMKGNLHKKMHSLT-MSFANSSIIK-DHLLLDIDRLIRFNLDSWS------SRVLLMEEAKKITFEL  177 (472)
T ss_pred             HHHHh-Cc-ccccccCcHHHHHHHHHH-HHhcChHHHH-HHHHHHHHHHHHHHHHhhc------cceehHHHHHHHHHHH
Confidence            12222 32 345556899999999997 5544444444 322 112233333344331      3699999999999999


Q ss_pred             HHHHHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 010346          193 VFRIALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSN  272 (512)
Q Consensus       193 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  272 (512)
                      +++++||.+...   ....+.+.+.......    ....+|++      .+..++..++.+.+.+++.+.++++++..+.
T Consensus       178 i~~~~fg~~~~~---~~~~~~~~~~~~~~~~----~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  244 (472)
T PLN02987        178 TVKQLMSFDPGE---WTESLRKEYVLVIEGF----FSVPLPLF------STTYRRAIQARTKVAEALTLVVMKRRKEEEE  244 (472)
T ss_pred             HHHHHcCCCChH---HHHHHHHHHHHHHhhh----hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            999999976642   1222323332222111    11123432      1234667788899999999999988765432


Q ss_pred             CCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhc---
Q 010346          273 NSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVG---  349 (512)
Q Consensus       273 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~---  349 (512)
                      +  ....+|+++.++...      .+++++++++++..+++||+|||+++++|++++|++||++|+++++|++++.+   
T Consensus       245 ~--~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~  316 (472)
T PLN02987        245 G--AEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKS  316 (472)
T ss_pred             c--CcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccC
Confidence            1  123569999998652      25899999999999999999999999999999999999999999999999875   


Q ss_pred             CCCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccc
Q 010346          350 QKSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERF  429 (512)
Q Consensus       350 ~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~  429 (512)
                      ++..++.+++.++||++||++||+|++|+++.. +|.+.+|++++||.||+|+.|+++.+.+|+||++|+||++||||||
T Consensus       317 ~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRf  395 (472)
T PLN02987        317 DSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRW  395 (472)
T ss_pred             CCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccC
Confidence            334678899999999999999999999999854 5999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEee
Q 010346          430 LNSSISFQGHDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHALA  509 (512)
Q Consensus       430 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (512)
                      ++++.. ...+..++|||+|+|.|+|++||++|++++++.|+++|++++.++     .+.    ....++.|..++.+++
T Consensus       396 l~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-----~~~----~~~~~~~p~~~~~~~~  465 (472)
T PLN02987        396 QSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQ-----DKL----VFFPTTRTQKRYPINV  465 (472)
T ss_pred             CCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCC-----Cce----eecccccCCCCceEEE
Confidence            976422 123457999999999999999999999999999999999998665     211    1234778888888888


Q ss_pred             ccC
Q 010346          510 IPR  512 (512)
Q Consensus       510 ~~~  512 (512)
                      ++|
T Consensus       466 ~~r  468 (472)
T PLN02987        466 KRR  468 (472)
T ss_pred             Eec
Confidence            776


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-68  Score=476.09  Aligned_cols=441  Identities=22%  Similarity=0.354  Sum_probs=348.3

Q ss_pred             CCCCCC-CCCcccccccCCCcccHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccccCCCCcchhhhcC
Q 010346           41 LPPSPP-KLPIIGNLHQLGLFPHRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFANRPKLTPFVKLLN  119 (512)
Q Consensus        41 ~ppgp~-~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~~~~~~  119 (512)
                      .||.-+ ++||+|+...++++|.+++++.++|||+||++.++|+.+.++.||+....|+++.....+............+
T Consensus        32 ~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vF  111 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVF  111 (486)
T ss_pred             CCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhc
Confidence            456444 5999999999999999999999999999999999999999999999999999876433332222222222222


Q ss_pred             CCcceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHH-hhcccCCCCCcchHHHHHHHHHHHHHHHHh
Q 010346          120 GCIDVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQK-IKPFASSSSPIDLSDILFTLTNNIVFRIAL  198 (512)
Q Consensus       120 ~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~~vdl~~~~~~~~~~vi~~~~f  198 (512)
                       +.+.+..........+.+.+ ..++....++ .+.+.|.+++++.+.. +.   ++|....+......+++.+.-.+++
T Consensus       112 -g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk-~~~e~m~~el~~~f~~~~~---~s~~~d~l~~~~~~ii~tAs~~ll~  185 (486)
T KOG0684|consen  112 -GKGVVYDVPNHVMMEQKKFF-KSALGGVALK-SLVELMLEELHAYFETSLG---ESGETDGLYTFCRLIIFTASRLLLG  185 (486)
T ss_pred             -CCCccccCCCchHHHHHHHH-HHHhchhhHH-HHHHHHHHHHHHHHhcccc---cccchhHhhhhhHHHhhhhHHHhhh
Confidence             33455555566777777776 7888888898 9999999999888877 43   2555566777777777777777777


Q ss_pred             ccccCCCcchHHHHHHHHHHHHHHhcccccchhhh-hhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 010346          199 GRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIP-WLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNSQVE  277 (512)
Q Consensus       199 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  277 (512)
                      |......+.+   ....+.+....+..  +...|| ++.     ....++..++.+.+.+.+...+.++++..+.     
T Consensus       186 ~e~r~~~d~~---~a~l~~dLd~~F~~--~d~~FP~~LP-----~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~-----  250 (486)
T KOG0684|consen  186 GEVRDQLDAD---VAKLYHDLDQGFQP--FDFLFPYNLP-----IPLLRRRDRARKKISKIFSKIILDRRASISK-----  250 (486)
T ss_pred             hhhhhhhcch---HHHHHHHHhccccc--hHhhcccCCC-----cchhhhHHHHHHHHHHHHHHHHHHHHhcccc-----
Confidence            7655543322   22333333333332  233566 333     2234666689999999999999998876543     


Q ss_pred             CCccHHHHHHHhhhcccCCCCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCCCC-CCc
Q 010346          278 DHKDFIDVLLWLQKENILDFPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQKSD-ITE  356 (512)
Q Consensus       278 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~~~  356 (512)
                      ...|+++.+++-.++   +.+.+++|+....+.++|||+.||+.|.+|++++|++|||+++.+++|+++++|++.. ++.
T Consensus       251 ~~~dmlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~  327 (486)
T KOG0684|consen  251 WDNDMLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY  327 (486)
T ss_pred             ccHHHHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence            456899988873333   3589999999999999999999999999999999999999999999999999998765 999


Q ss_pred             cccccChhHHHHHHhhcCCCCCCCCCCccccccCceecC----eecCCCCEEEeehhhhhcCCCCccCccCCCCccccCC
Q 010346          357 EDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKING----YDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLNS  432 (512)
Q Consensus       357 ~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  432 (512)
                      +++++||.|++||+|||||+||.+..+ |.+.+|+++.+    |.||+|..|.++++.+|+||++||||++|+||||+++
T Consensus       328 d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~  406 (486)
T KOG0684|consen  328 DQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD  406 (486)
T ss_pred             HHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence            999999999999999999999998776 99999999976    9999999999999999999999999999999999976


Q ss_pred             CCCC--CC--CcceeecCCCCCCCCcchHHHHHHHHHHHHHhhhcccccCCCcccccCccCCCCCCCCceeecCCCeeEe
Q 010346          433 SISF--QG--HDVQFIPFGAGRRGCPGTDFAMRMIELALASLLREFDWSFPDQEAKGQQRLDVPESNGLTIHRKFPLHAL  508 (512)
Q Consensus       433 ~~~~--~~--~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (512)
                      +.+.  .+  -.+.++|||+|.|.|||++||.+|+|+++..+|++||+++.+++      .+-......++.|.++++++
T Consensus       407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~------~P~~d~s~~v~~P~g~v~ir  480 (486)
T KOG0684|consen  407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGP------FPEVDYSRMVMQPEGDVRIR  480 (486)
T ss_pred             CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCC------CCCCCHHHhhcCCCCCceEE
Confidence            5432  12  23456999999999999999999999999999999999999861      22223344588888888777


Q ss_pred             eccC
Q 010346          509 AIPR  512 (512)
Q Consensus       509 ~~~~  512 (512)
                      -|-|
T Consensus       481 YK~R  484 (486)
T KOG0684|consen  481 YKRR  484 (486)
T ss_pred             Eeec
Confidence            6543


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.4e-60  Score=459.18  Aligned_cols=401  Identities=18%  Similarity=0.263  Sum_probs=292.7

Q ss_pred             CCCCCCCCCCCcccccccC-----CCcccHHHHHHHHhhCC-cEEEeeCCeeE-------EEEcCHHHHHHHHHh----c
Q 010346           39 KSLPPSPPKLPIIGNLHQL-----GLFPHRSLGALAQRYGP-LMLLHLGKVPV-------LVVSSADAACEIVRT----H  101 (512)
Q Consensus        39 ~~~ppgp~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~v~dp~~i~~v~~~----~  101 (512)
                      .+.|||+.++|++|++.++     ..++..++.+.++|||+ ||+++++|.++       |+++||++++.||.+    +
T Consensus        16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~   95 (480)
T PLN02648         16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK   95 (480)
T ss_pred             CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence            3458999999999999865     34557999999999999 99999998665       999999999999974    3


Q ss_pred             CcccccCCCCcchhhhcCCCc--ceeeccCChhHHHHHHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCc
Q 010346          102 DVIFANRPKLTPFVKLLNGCI--DVSMAPYGEYLRKVKSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPI  179 (512)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v  179 (512)
                      ...+... +.... .. .|+.  .+++..+|+.|+++|+++ .++|+ ..++ .+.+.+.+.++.++++|......++++
T Consensus        96 ~~~~~~~-~~~~~-~l-~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~-~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         96 RDVFTGT-YMPST-AF-TGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHR-RFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             cccceee-eccCc-cc-cCCceeeeecCCCCchHHHHHHHH-HHHHH-Hhhh-hhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence            3323321 11222 22 2222  156667899999999998 89998 4667 899999999999999996432345579


Q ss_pred             chHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhh-----hhh----ccchhH-HHH
Q 010346          180 DLSDILFTLTNNIVFRIALGRKYSDQGEVGSKFRKQFKDFIELMATFHVGDYIPWLGW-----ICY----FSGLNA-RLK  249 (512)
Q Consensus       180 dl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-----~~~----~~~~~~-~~~  249 (512)
                      |+.+.++++++|++++++||.+.+. ..-...+...+..+...       ..+|....     +..    ..+... ...
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~-~~l~~~~~~~~~~~~~~-------~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~  241 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSE-TALGSDGPALIQKWLAL-------QLAPLASTGLPHVLEELLLHTFPLPFFLVK  241 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcch-hhhccchhHHHHHHHHH-------HhhHHHHcCchHHHHHHhhcccCCchhhhh
Confidence            9999999999999999999987663 10001111111111100       00111000     000    000000 000


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCccHHHHHHHhhhcccCCCCCCHHHHHHHHHH-HhccCccchHHHHHHHHH
Q 010346          250 KTAKEVDDFLEVVIQEHENRMSNNSQVEDHKDFIDVLLWLQKENILDFPIDKATIKALLQD-VFGPGTDSTHTVLEWAMT  328 (512)
Q Consensus       250 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~Ag~~tt~~~l~~~l~  328 (512)
                      +..+.+.+++++                    .++.++....+    .++++++++++++. ..+++++|++++++|+++
T Consensus       242 ~~~~~~~~~~~~--------------------~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~  297 (480)
T PLN02648        242 SDYDKLYDFFRA--------------------SATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPALLK  297 (480)
T ss_pred             ccHHHHHHHHHH--------------------HHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            011111111111                    11233332222    25899999998875 446778888899999999


Q ss_pred             HHhhChh-HHHHHHHHHHHHhcC-CCCCCccccccChhHHHHHHhhcCCCCCCCCCCccccccCceec----CeecCCCC
Q 010346          329 ELLRHPE-MMEAVQNEVRRIVGQ-KSDITEEDLNDMHYLKAVIKETLRFHPPVPLLVPRQSTQQVKIN----GYDVAAGT  402 (512)
Q Consensus       329 ~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~----g~~ip~g~  402 (512)
                      +|++||+ +|++|++||+++++. ++.++.+++.+||||++||+||||++|+++... |.+.+|++++    ||.||||+
T Consensus       298 ~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~  376 (480)
T PLN02648        298 WVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGE  376 (480)
T ss_pred             HHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCC
Confidence            9999995 999999999999873 457899999999999999999999999999876 8889999996    79999999


Q ss_pred             EEEeehhhhhcCCCCccCccCCCCccccCCCCCCCCCcceeecC---------CCCCCCCcchHHHHHHHHHHHHHhhhc
Q 010346          403 QVYINYWAISRDPASWDQAEEFRPERFLNSSISFQGHDVQFIPF---------GAGRRGCPGTDFAMRMIELALASLLRE  473 (512)
Q Consensus       403 ~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~lA~~e~~~~l~~ll~~  473 (512)
                      .|+++.+.+||||++|+||++|||+||++++..   ....+++|         |+|+|.|+|++||++|++++++.|+++
T Consensus       377 ~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~  453 (480)
T PLN02648        377 MLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLR  453 (480)
T ss_pred             EEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999975321   11234444         677899999999999999999999999


Q ss_pred             cc-ccCCCc
Q 010346          474 FD-WSFPDQ  481 (512)
Q Consensus       474 ~~-~~~~~~  481 (512)
                      |+ |++.++
T Consensus       454 f~~~~l~~~  462 (480)
T PLN02648        454 YDSFEIEVD  462 (480)
T ss_pred             hCEEeecCC
Confidence            98 998776


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.4e-55  Score=417.39  Aligned_cols=358  Identities=26%  Similarity=0.403  Sum_probs=293.4

Q ss_pred             cHHHHHHHHhhCCcEEEeeCCee--EEEEcCHHHHHHHHHhcCcccccCCCCcch---hhhcCCCcceeeccCChhHHHH
Q 010346           62 HRSLGALAQRYGPLMLLHLGKVP--VLVVSSADAACEIVRTHDVIFANRPKLTPF---VKLLNGCIDVSMAPYGEYLRKV  136 (512)
Q Consensus        62 ~~~~~~~~~kyG~v~~~~~~~~~--~v~v~dp~~i~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~  136 (512)
                      ......+.+.||.+..+...+.-  .+++++++.+++++.++. .+.+.......   ..... +...++..+|+.|+++
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~ll~~dg~~H~r~  102 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVL-GDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhc-cccceeecCCHHHHHH
Confidence            44556778888988888776665  799999999999998764 12222211111   11111 2333777899999999


Q ss_pred             HHHHHHhhcCchhhhhhhHHHHHHHHHHHHHHhhcccCCCCCcchHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHH
Q 010346          137 KSLFVVQLLSNKMIHYSFRDVRVEEVALMIQKIKPFASSSSPIDLSDILFTLTNNIVFRIALGRKYSDQGEVGSKFRKQF  216 (512)
Q Consensus       137 R~~~~~~~f~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~  216 (512)
                      |+++ .++|+++.++ .+.+.+.+.++++++.+ .  .+ +.+++.+....+++++|+ .+||.+..+    ...+....
T Consensus       103 Rkl~-~~~F~~~~~~-~~~~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~----~~~~~~~~  171 (411)
T COG2124         103 RKLL-APAFTPRALR-GYRPLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLED----RPQLLRWS  171 (411)
T ss_pred             HHHh-ccccCHHHHH-HHHHHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHH----HHHHHHHH
Confidence            9998 9999999999 99999999999999998 3  22 678899999999999999 999998873    22333332


Q ss_pred             HHHHHHhcccccchhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCccHHHHHHHhhhcccCC
Q 010346          217 KDFIELMATFHVGDYIPWLGWICYFSGLNARLKKTAKEVDDFLEVVIQEHENRMSNNSQVEDHKDFIDVLLWLQKENILD  296 (512)
Q Consensus       217 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  296 (512)
                      ........        |...    ......+..++.+.+.+++..+|++++.        .+.+|+++.|+.+..+++  
T Consensus       172 ~~~~~~~~--------~~~~----~~~~~~~~~~a~~~~~~~~~~li~~rR~--------~~~~dlls~l~~a~~~~~--  229 (411)
T COG2124         172 DALLLRLD--------PDLG----PEEPWRRARAARRELDAYLRALIAERRA--------APRDDLLSLLLSAEDDGG--  229 (411)
T ss_pred             HHHHhccC--------cccC----CcccHHHHHHHHHHHHHHHHHHHHHhcc--------CCcccHHHHHHHHhhCCC--
Confidence            22222200        1111    1112367788889999999999999983        367899999998877763  


Q ss_pred             CCCCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHhcCCCCCCccccccChhHHHHHHhhcCCC
Q 010346          297 FPIDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIVGQKSDITEEDLNDMHYLKAVIKETLRFH  376 (512)
Q Consensus       297 ~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~  376 (512)
                      ..++++|+.++++++++||+|||+++++|+++.|++||++++++++|.+.                ||++++++|+||++
T Consensus       230 ~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~  293 (411)
T COG2124         230 GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLY  293 (411)
T ss_pred             CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhC
Confidence            26999999999999999999999999999999999999999999998764                89999999999999


Q ss_pred             CCCCCCCccccccCceecCeecCCCCEEEeehhhhhcCCCCccCccCCCCccccCCCCCCCCCcceeecCCCCCCCCcch
Q 010346          377 PPVPLLVPRQSTQQVKINGYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLNSSISFQGHDVQFIPFGAGRRGCPGT  456 (512)
Q Consensus       377 p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~  456 (512)
                      ||++. .+|.+.+|++++|+.||+|+.|+++++++||||++|+||++|||+||.          ..++|||+|+|.|+|+
T Consensus       294 ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~  362 (411)
T COG2124         294 PPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGA  362 (411)
T ss_pred             Cchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCH
Confidence            99998 669999999999999999999999999999999999999999999998          2489999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcccccCCCc
Q 010346          457 DFAMRMIELALASLLREFDWSFPDQ  481 (512)
Q Consensus       457 ~lA~~e~~~~l~~ll~~~~~~~~~~  481 (512)
                      +||++|++++++.++++|++....+
T Consensus       363 ~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         363 ALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             HHHHHHHHHHHHHHHHhCchhhcCC
Confidence            9999999999999999999876553


No 33 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=67.13  E-value=8  Score=27.06  Aligned_cols=37  Identities=19%  Similarity=0.381  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCccc
Q 010346           12 TLFTIAACIFAVFALFKWFLVQPISSKKSLPPSPPKLPIIG   52 (512)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG   52 (512)
                      +++++.++.+++++++.+..-...++.    .-|.+-|++|
T Consensus        35 m~~lvI~~iFil~VilwfvCC~kRkrs----RrPIYrPvI~   71 (94)
T PF05393_consen   35 MWFLVICGIFILLVILWFVCCKKRKRS----RRPIYRPVIG   71 (94)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhc----cCCccccccc
Confidence            445555555455444443322221222    2334677777


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=54.67  E-value=8.5  Score=25.05  Aligned_cols=8  Identities=50%  Similarity=0.933  Sum_probs=6.1

Q ss_pred             CCccccCC
Q 010346          425 RPERFLNS  432 (512)
Q Consensus       425 ~P~R~l~~  432 (512)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78888864


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=51.72  E-value=15  Score=23.70  Aligned_cols=24  Identities=17%  Similarity=0.393  Sum_probs=18.4

Q ss_pred             HHHHHHhhChhHHHHHHHHHHHHh
Q 010346          325 WAMTELLRHPEMMEAVQNEVRRIV  348 (512)
Q Consensus       325 ~~l~~L~~~p~~~~~l~~Ei~~~~  348 (512)
                      -++.||.+||++.+++.+.=.+.+
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEe
Confidence            457899999999999988443333


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=50.55  E-value=59  Score=20.18  Aligned_cols=42  Identities=21%  Similarity=0.284  Sum_probs=32.6

Q ss_pred             HHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHH
Q 010346          303 TIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEV  344 (512)
Q Consensus       303 ~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  344 (512)
                      ++..++..++-.|.|..+-.++-.|....-||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455666677777888888888888888888999888887776


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=49.49  E-value=16  Score=25.09  Aligned_cols=40  Identities=13%  Similarity=0.238  Sum_probs=32.1

Q ss_pred             HHHhhcCCCCCCCCCCccccccCce--ecCeecCCCCEEEee
Q 010346          368 VIKETLRFHPPVPLLVPRQSTQQVK--INGYDVAAGTQVYIN  407 (512)
Q Consensus       368 ~i~EtlRl~p~~~~~~~R~~~~~~~--~~g~~ip~g~~v~~~  407 (512)
                      -++|-+.+.+..-...-|.+.+++.  ++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            3688899999887667677766655  599999999999875


No 38 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=40.17  E-value=46  Score=30.31  Aligned_cols=70  Identities=21%  Similarity=0.342  Sum_probs=47.0

Q ss_pred             HHHHHHhhcCCCCCC---CCCCccccccCceec----CeecCCCCEEEeehhhhhcCCCCccCccCCCCccccCCCCCCC
Q 010346          365 LKAVIKETLRFHPPV---PLLVPRQSTQQVKIN----GYDVAAGTQVYINYWAISRDPASWDQAEEFRPERFLNSSISFQ  437 (512)
Q Consensus       365 l~a~i~EtlRl~p~~---~~~~~R~~~~~~~~~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~  437 (512)
                      -+.+++.|..+.||.   |+.+.-.++.|.++=    .-+|..||.|.++                              
T Consensus       275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------  324 (361)
T COG1759         275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------  324 (361)
T ss_pred             HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------
Confidence            456788888899975   445545556665542    2367888877664                              


Q ss_pred             CCcceeecCCCCCCCCcchHHHHHHHHHHH
Q 010346          438 GHDVQFIPFGAGRRGCPGTDFAMRMIELAL  467 (512)
Q Consensus       438 ~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l  467 (512)
                      +++++++-||-+  +-.|+++|. |+|.++
T Consensus       325 GspYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         325 GSPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence            234566666655  678999998 887765


No 39 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=39.62  E-value=23  Score=27.54  Aligned_cols=23  Identities=22%  Similarity=0.462  Sum_probs=16.8

Q ss_pred             CCCcchHHHHHHHHHHHHHhhhc
Q 010346          451 RGCPGTDFAMRMIELALASLLRE  473 (512)
Q Consensus       451 r~C~G~~lA~~e~~~~l~~ll~~  473 (512)
                      -.|.|++||+.++-.++..|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            37999999999999999999864


No 40 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=36.56  E-value=16  Score=23.02  Aligned_cols=11  Identities=45%  Similarity=0.984  Sum_probs=9.3

Q ss_pred             ecCCCCCCCCc
Q 010346          444 IPFGAGRRGCP  454 (512)
Q Consensus       444 ~~Fg~G~r~C~  454 (512)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999885


No 41 
>PHA02902 putative IMV membrane protein; Provisional
Probab=34.56  E-value=85  Score=20.62  Aligned_cols=21  Identities=29%  Similarity=0.472  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc
Q 010346           13 LFTIAACIFAVFALFKWFLVQ   33 (512)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~   33 (512)
                      ++.+.++.++++|++.+..++
T Consensus         5 tfvi~~v~v~Ivclliya~Yr   25 (70)
T PHA02902          5 TFVILAVIVIIFCLLIYAAYK   25 (70)
T ss_pred             hHHHHHHHHHHHHHHHHHHHH
Confidence            344555555555555544433


No 42 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=33.88  E-value=1.4e+02  Score=29.15  Aligned_cols=36  Identities=17%  Similarity=0.213  Sum_probs=18.6

Q ss_pred             hhCCcEEEeeCCeeEEEEcCHHHHHHHHHhcCcccc
Q 010346           71 RYGPLMLLHLGKVPVLVVSSADAACEIVRTHDVIFA  106 (512)
Q Consensus        71 kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~~~~~~  106 (512)
                      +||.|+.-.+-++.+-|=.=|..-++=+.++..+|+
T Consensus       222 rfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             ccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            678887776666554333333333333434444443


No 43 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=32.10  E-value=1.1e+02  Score=23.84  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=30.2

Q ss_pred             cHHHHHHHHhhCCcEEEeeCCeeEEEEcCHHHHHHHHHhc
Q 010346           62 HRSLGALAQRYGPLMLLHLGKVPVLVVSSADAACEIVRTH  101 (512)
Q Consensus        62 ~~~~~~~~~kyG~v~~~~~~~~~~v~v~dp~~i~~v~~~~  101 (512)
                      ...+++|.++||.+--.  .+...+.+.|++.++++....
T Consensus        77 ~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   77 EQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            56799999999995442  256788899999999998654


No 44 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=31.24  E-value=66  Score=18.93  Aligned_cols=29  Identities=24%  Similarity=0.495  Sum_probs=19.8

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCCccccccChhHHHHHHhhcC
Q 010346          333 HPEMMEAVQNEVRRIVGQKSDITEEDLNDMHYLKAVIKETLR  374 (512)
Q Consensus       333 ~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR  374 (512)
                      ..|+.+.+|.|++.+             +-..++|+..|--|
T Consensus         9 KqEIL~EvrkEl~K~-------------K~EIIeA~~~eL~r   37 (40)
T PF08776_consen    9 KQEILEEVRKELQKV-------------KEEIIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHhc
Confidence            457778888888775             33567777777554


No 45 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=30.59  E-value=40  Score=28.69  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=32.0

Q ss_pred             cChhHHHHHHhhcCCCCCCCCCCcccc-ccCceecCeecCCCCEEEe
Q 010346          361 DMHYLKAVIKETLRFHPPVPLLVPRQS-TQQVKINGYDVAAGTQVYI  406 (512)
Q Consensus       361 ~lp~l~a~i~EtlRl~p~~~~~~~R~~-~~~~~~~g~~ip~g~~v~~  406 (512)
                      .-..+.|||.|+.-+....   .-|.. .+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs---~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS---RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC---EEEEEEcCceEECCEEeCCCCEEEE
Confidence            4467889999997765533   22533 5899999999999997755


No 46 
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ.  Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane.  Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I.  Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center.  ccoQ, the fourth subunit, is a single transmembrane helix protein.  It has been shown to protect the core complex from proteolytic degradation by serine proteases.  See cd00919, cd01322
Probab=29.36  E-value=1.5e+02  Score=18.47  Aligned_cols=31  Identities=13%  Similarity=0.263  Sum_probs=12.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010346            1 MSVFQQLLNLQTLFTIAACIFAVFALFKWFL   31 (512)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   31 (512)
                      |.+.+.+......+.++...++.+.++.|.+
T Consensus         1 Md~~~~lr~~a~~~~l~~~~~~Figiv~wa~   31 (48)
T cd01324           1 MDIGETLRGLADSWGLLYLALFFLGVVVWAF   31 (48)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3344344444444443333333334444443


No 47 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=29.33  E-value=86  Score=18.34  Aligned_cols=17  Identities=29%  Similarity=0.684  Sum_probs=11.6

Q ss_pred             HHHHHh-hChhHHHHHHH
Q 010346          326 AMTELL-RHPEMMEAVQN  342 (512)
Q Consensus       326 ~l~~L~-~~p~~~~~l~~  342 (512)
                      .+..++ +|||+++.++.
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            333444 79999988765


No 48 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=28.69  E-value=1.2e+02  Score=21.67  Aligned_cols=18  Identities=17%  Similarity=0.641  Sum_probs=15.4

Q ss_pred             ChhHHHHHHHHHHHHhcC
Q 010346          333 HPEMMEAVQNEVRRIVGQ  350 (512)
Q Consensus       333 ~p~~~~~l~~Ei~~~~~~  350 (512)
                      .|++.+.+|+||-+|+..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            489999999999998753


No 49 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=28.63  E-value=58  Score=25.10  Aligned_cols=11  Identities=9%  Similarity=0.238  Sum_probs=3.9

Q ss_pred             HHHhhccCCCC
Q 010346           28 KWFLVQPISSK   38 (512)
Q Consensus        28 ~~~~~~~~~~~   38 (512)
                      .+|+.+|++|+
T Consensus        84 i~y~irR~~Kk   94 (122)
T PF01102_consen   84 ISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHS--
T ss_pred             HHHHHHHHhcc
Confidence            33444444444


No 50 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=28.49  E-value=53  Score=20.91  Aligned_cols=17  Identities=24%  Similarity=0.333  Sum_probs=15.3

Q ss_pred             CCcEEEeeCCeeEEEEc
Q 010346           73 GPLMLLHLGKVPVLVVS   89 (512)
Q Consensus        73 G~v~~~~~~~~~~v~v~   89 (512)
                      |+||+++.||+.++|..
T Consensus         4 GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    4 GDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCEEEEccCCCCeEEEE
Confidence            89999999999998873


No 51 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=27.01  E-value=1.6e+02  Score=18.42  Aligned_cols=35  Identities=17%  Similarity=0.269  Sum_probs=24.7

Q ss_pred             HHHHHHhhCCcEEEeeCC----eeEEEEcCHHHHHHHHH
Q 010346           65 LGALAQRYGPLMLLHLGK----VPVLVVSSADAACEIVR   99 (512)
Q Consensus        65 ~~~~~~kyG~v~~~~~~~----~~~v~v~dp~~i~~v~~   99 (512)
                      +.+..++||+|..+.+..    .-+|-..+++.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            356778999998877643    34666778888888775


No 52 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=25.93  E-value=1.8e+02  Score=20.59  Aligned_cols=38  Identities=16%  Similarity=0.125  Sum_probs=29.9

Q ss_pred             cHHHHHHHHhhCCc---EEEeeCCeeEEEEcCH-----HHHHHHHH
Q 010346           62 HRSLGALAQRYGPL---MLLHLGKVPVLVVSSA-----DAACEIVR   99 (512)
Q Consensus        62 ~~~~~~~~~kyG~v---~~~~~~~~~~v~v~dp-----~~i~~v~~   99 (512)
                      .+.-++++++|.++   +++..++.+.+.|.+.     +.+.+++.
T Consensus        23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq   68 (81)
T PRK10597         23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ   68 (81)
T ss_pred             HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence            46678899999887   9999999999888544     56666664


No 53 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=24.85  E-value=2.6e+02  Score=19.91  Aligned_cols=50  Identities=12%  Similarity=0.026  Sum_probs=40.8

Q ss_pred             CCHHHHHHHHHHHhccCccchHHHHHHHHHHHhhChhHHHHHHHHHHHHh
Q 010346          299 IDKATIKALLQDVFGPGTDSTHTVLEWAMTELLRHPEMMEAVQNEVRRIV  348 (512)
Q Consensus       299 l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  348 (512)
                      .+.+.........++-=++.++....-.+.+-++||+..+++.+++..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34445556666777888999999999999999999999999999887654


No 54 
>PRK05933 type III secretion system protein; Validated
Probab=24.13  E-value=68  Score=29.30  Aligned_cols=45  Identities=20%  Similarity=0.252  Sum_probs=35.2

Q ss_pred             hhHHHHHHhhcCCCCCCCCCCcccc-cc--CceecCeecCCCCEEEee
Q 010346          363 HYLKAVIKETLRFHPPVPLLVPRQS-TQ--QVKINGYDVAAGTQVYIN  407 (512)
Q Consensus       363 p~l~a~i~EtlRl~p~~~~~~~R~~-~~--~~~~~g~~ip~g~~v~~~  407 (512)
                      =...--|+|.++|.+..-+-+-|.+ .+  |+.++|..|.+|.+|.++
T Consensus       315 GRT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        315 ARYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            3466778999999998876665554 34  556799999999999886


No 55 
>PF10726 DUF2518:  Protein of function (DUF2518);  InterPro: IPR019664  This entry contains the Ycf51 protein family, which is conserved in Cyanobacteria. The function is not known. 
Probab=23.58  E-value=1.9e+02  Score=22.96  Aligned_cols=35  Identities=23%  Similarity=0.325  Sum_probs=23.0

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 010346            1 MSVFQQLLNLQTLFTIAACIFAVFALFKWFLVQPI   35 (512)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   35 (512)
                      |+..+.++...-|..++.+.++++.++.+.+.+..
T Consensus         1 M~~~~~~~~~~~W~~~~ti~~~~lTilaFi~~WG~   35 (145)
T PF10726_consen    1 MSTPELFLTYTQWLGIATIALAVLTILAFIFKWGI   35 (145)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            66666777777777777666666666666655443


No 56 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=22.31  E-value=27  Score=28.43  Aligned_cols=36  Identities=22%  Similarity=0.493  Sum_probs=26.3

Q ss_pred             cCCCCccccCCCCCCCCCcceeecCCCCCCCCcchH
Q 010346          422 EEFRPERFLNSSISFQGHDVQFIPFGAGRRGCPGTD  457 (512)
Q Consensus       422 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~  457 (512)
                      -+|||++|-.=--+...+..+.+=|..|+=.|-|..
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            479999987532222234567899999999999975


No 57 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=22.06  E-value=45  Score=28.45  Aligned_cols=23  Identities=43%  Similarity=0.791  Sum_probs=19.2

Q ss_pred             eehhhh-hcCCCCccCccCCCCcc
Q 010346          406 INYWAI-SRDPASWDQAEEFRPER  428 (512)
Q Consensus       406 ~~~~~~-~~d~~~~~~p~~F~P~R  428 (512)
                      ++-|.- |.|+.+|.|...|+|-|
T Consensus       188 iPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  188 IPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCCCcccccCccccCCCC
Confidence            344554 89999999999999988


No 58 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=21.71  E-value=35  Score=25.13  Aligned_cols=18  Identities=33%  Similarity=0.564  Sum_probs=14.7

Q ss_pred             CcceeecCCCCCCCCcch
Q 010346          439 HDVQFIPFGAGRRGCPGT  456 (512)
Q Consensus       439 ~~~~~~~Fg~G~r~C~G~  456 (512)
                      .....+|||.|.-.|+|.
T Consensus       103 ~gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAA  120 (131)
T ss_pred             cCcccCCcCccHHHHHHH
Confidence            345689999999999875


No 59 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=21.07  E-value=3e+02  Score=20.74  Aligned_cols=11  Identities=36%  Similarity=0.422  Sum_probs=7.1

Q ss_pred             CCCcccccccC
Q 010346           47 KLPIIGNLHQL   57 (512)
Q Consensus        47 ~~p~lG~~~~~   57 (512)
                      .-|+.||+-..
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            46777886543


No 60 
>PF05545 FixQ:  Cbb3-type cytochrome oxidase component FixQ;  InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.54  E-value=2.2e+02  Score=17.54  Aligned_cols=7  Identities=14%  Similarity=0.629  Sum_probs=2.7

Q ss_pred             HHHHHHh
Q 010346           25 ALFKWFL   31 (512)
Q Consensus        25 ~~~~~~~   31 (512)
                      .++.|.+
T Consensus        24 gi~~w~~   30 (49)
T PF05545_consen   24 GIVIWAY   30 (49)
T ss_pred             HHHHHHH
Confidence            3333433


No 61 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=20.33  E-value=85  Score=24.84  Aligned_cols=43  Identities=19%  Similarity=0.260  Sum_probs=34.3

Q ss_pred             HHHHHHhhcCCCCCCCCCCccccccCce--ecCeecCCCCEEEee
Q 010346          365 LKAVIKETLRFHPPVPLLVPRQSTQQVK--INGYDVAAGTQVYIN  407 (512)
Q Consensus       365 l~a~i~EtlRl~p~~~~~~~R~~~~~~~--~~g~~ip~g~~v~~~  407 (512)
                      ..--++|-+++.+..-+...+.+.+++.  ++|+.|-+|..|.+.
T Consensus        82 ~~~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          82 TKMPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeeeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            4455788999999887777777777666  499999999999874


Done!