Query 010360
Match_columns 512
No_of_seqs 219 out of 1618
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 05:07:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010360.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010360hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1un8_A Dihydroxyacetone kinase 100.0 2E-141 6E-146 1143.8 44.2 469 1-506 73-551 (552)
2 3ct4_A PTS-dependent dihydroxy 100.0 1E-102 3E-107 793.4 27.0 261 1-266 70-332 (332)
3 1oi2_A Hypothetical protein YC 100.0 1E-102 3E-107 796.8 24.8 267 1-268 78-365 (366)
4 2iu4_A DHA-DHAQ, dihydroxyacet 100.0 9E-103 3E-107 793.8 23.4 262 1-267 66-330 (336)
5 3pnl_B PTS-dependent dihydroxy 100.0 6.9E-52 2.4E-56 401.8 20.4 201 302-506 4-210 (211)
6 3cr3_A PTS-dependent dihydroxy 100.0 1.5E-48 5.2E-53 373.1 19.2 188 303-505 3-191 (192)
7 3nyi_A FAT acid-binding protei 73.0 13 0.00045 36.9 9.3 94 13-120 67-165 (297)
8 3pl5_A SMU_165, putative uncha 71.2 13 0.00045 37.4 8.9 199 13-240 98-308 (320)
9 3fdj_A DEGV family protein; GU 71.0 18 0.00061 35.5 9.6 205 13-246 62-276 (278)
10 3jr7_A Uncharacterized EGV fam 69.4 14 0.00048 36.7 8.6 195 13-235 82-287 (298)
11 2dt8_A DEGV family protein; fa 54.2 38 0.0013 33.2 8.4 93 12-121 62-157 (280)
12 1pzx_A Hypothetical protein AP 53.0 46 0.0016 32.7 8.8 97 12-122 63-164 (289)
13 3ct6_A PTS-dependent dihydroxy 48.5 28 0.00096 30.4 5.7 79 15-119 45-125 (131)
14 2bz1_A GTP cyclohydrolase II; 47.0 9 0.00031 36.1 2.4 56 4-59 53-143 (196)
15 3b48_A Uncharacterized protein 41.7 51 0.0017 28.6 6.4 77 15-113 50-129 (135)
16 3djh_A Macrophage migration in 39.7 19 0.00064 30.2 3.1 40 190-229 57-96 (114)
17 3b64_A Macrophage migration in 38.1 24 0.0008 29.3 3.5 42 189-230 57-98 (112)
18 1uiz_A MIF, macrophage migrati 37.7 24 0.00082 29.3 3.5 41 189-229 57-97 (115)
19 3fwu_A Macrophage migration in 36.3 22 0.00076 31.0 3.1 41 190-230 79-119 (133)
20 4dh4_A MIF; trimer, isomerase; 36.3 19 0.00065 30.1 2.6 40 190-229 58-97 (114)
21 2os5_A Acemif; macrophage migr 35.8 30 0.001 29.0 3.8 42 188-229 56-97 (119)
22 1hfo_A Migration inhibitory fa 34.8 25 0.00084 29.1 3.0 40 190-229 57-96 (113)
23 1mgp_A Hypothetical protein TM 34.7 1.4E+02 0.0048 29.7 9.1 93 12-121 89-187 (313)
24 3fys_A Protein DEGV; fatty aci 34.2 1.6E+02 0.0056 29.2 9.5 93 12-120 96-192 (315)
25 2xcz_A Possible ATLS1-like lig 31.3 29 0.00098 28.8 2.9 41 189-229 57-97 (115)
26 3lup_A DEGV family protein; PS 30.7 1.3E+02 0.0044 29.4 8.0 93 12-120 65-161 (285)
27 3fwt_A Macrophage migration in 30.2 23 0.0008 30.8 2.2 41 190-230 79-119 (133)
28 3t5s_A Gilaa.00834.A, macropha 28.7 21 0.00073 31.1 1.7 40 190-229 79-118 (135)
29 2wkb_A Macrophage migration in 27.3 29 0.001 29.4 2.3 41 189-229 57-97 (125)
30 2lnd_A De novo designed protei 27.2 1E+02 0.0035 25.0 5.3 52 149-213 23-74 (112)
31 2yxd_A Probable cobalt-precorr 26.6 1.8E+02 0.0061 24.6 7.4 56 3-66 102-157 (183)
32 2aal_A Malonate semialdehyde d 24.0 56 0.0019 27.8 3.5 39 190-229 67-105 (131)
33 2id1_A Hypothetical protein; a 20.0 3.8E+02 0.013 23.2 8.0 95 162-260 2-110 (130)
No 1
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A*
Probab=100.00 E-value=1.7e-141 Score=1143.84 Aligned_cols=469 Identities=43% Similarity=0.650 Sum_probs=420.0
Q ss_pred CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCc
Q 010360 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (512)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gR 80 (512)
||||||||+||||||++||++|||++++++|||+|||||||||||||||+|+|+++||+|++|+|+||||++++ +||
T Consensus 73 ml~aav~G~vFaSPs~~~i~~ai~a~~~g~Gvl~ivkNYtGD~lnF~~A~e~a~~~gi~v~~v~v~DDva~~~~---~~R 149 (552)
T 1un8_A 73 MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDN---KHP 149 (552)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCTTCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCTTC---SSC
T ss_pred ccceeeecCcCCCCCHHHHHHHHHhhcCCCCEEEEecccHHHHhhHHHHHHHHHhcCCcEEEEEecCcccCCCC---CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 899
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCCCCCCC-CcCCCeeEEeccccCCCCccccc
Q 010360 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVAD 159 (512)
Q Consensus 81 RG~aG~v~v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~gval~~c~~P~~~~~~-~l~~~e~E~G~GiHgEpG~~~~~ 159 (512)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+++|+| +|++||||||||||||||++|.+
T Consensus 150 RGvaGtv~v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~s~gval~~ctvP~~~~~f~~l~~~e~E~G~GiHGEpG~~~~~ 229 (552)
T 1un8_A 150 RGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSLGVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVID 229 (552)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEEEEECCCCSSCCSSSCCBCTTCEEETCCTTCCCCSEEES
T ss_pred CchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhceEEEEEcCCccCCCCCCCcccCCCCceEeccccCCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec--ccccccC
Q 010360 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG--SFMTSLD 237 (512)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G--~~~TSl~ 237 (512)
++++++++++|+++|+++ ++++ |+|+|||||||+||.+|||++++++.++|+++ | +|+|+| +||||||
T Consensus 230 ~~~a~~~~~~l~~~ll~~----~~~~--~~v~~lvN~lG~t~~~El~i~~~~v~~~L~~~-g---~~~~vG~~~~~Tsld 299 (552)
T 1un8_A 230 TQNSAQVVNLMVDKLLAA----LPET--GRLAVMINNLGGVSVAEMAIITRELASSPLHS-R---IDWLIGPASLVTALD 299 (552)
T ss_dssp CCBHHHHHHHHHHHHHHH----SCSS--CCEEEEEEECBCSCHHHHHHHHHHHHTSTTGG-G---EEEEEEEECSSCCTT
T ss_pred CCCHHHHHHHHHHHHHhh----CCCc--CcEEEEEeCCCCCCHHHHHHHHHHHHHHHHHc-C---CeeeeCCccccCccC
Confidence 999999999999999986 7777 89999999999999999999999999999888 8 999999 9999999
Q ss_pred CCcceEEEeeccHHHHHhhcCcCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCcccCCCccccccHHHHHHHHHHHH
Q 010360 238 MAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIP--VPMPPSHSMKSDESLGRPLQLSQQGHVLEVTIEAAA 315 (512)
Q Consensus 238 m~GfSiTll~ld~~~~~~ldap~~a~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 315 (512)
|+|||||||++|+++++|||+||++|+||+... + ...+ .+... . . . .. ..+.. + ..+++||..++
T Consensus 300 m~G~SiTll~ld~el~~~ldap~~~~~~~~~~~---~-~~~~~~~~~~~-~-~-~-~~-~~~~~---~-~~l~~~l~~~a 366 (552)
T 1un8_A 300 MKGFSLTAIVLEESIEKALLTEVETSNWPTPVP---P-REITCVVSSHA-S-A-R-VE-FQPSA---N-ALVAGIVELVT 366 (552)
T ss_dssp BEEEEEEEEECCTTHHHHHHSCCCCSSCCCCBC---C-CCCCEECCCCC-C-C-S-CC-CCCBC---C-HHHHHHHHHHH
T ss_pred CCcceEEeecCCHHHHHHhcCCCCCCCCCCccC---c-ccccccccccc-c-c-c-CC-CCcch---h-HHHHHHHHHHH
Confidence 999999999999999999999999999997431 1 0001 00000 0 0 0 00 11111 3 56899999999
Q ss_pred HHHHHhHHHhhhccCCCCCCchhHHHHHHHHHHHHHhhhcC--CCCCHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHH
Q 010360 316 EAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYY--PLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYA 393 (512)
Q Consensus 316 ~~li~~e~~Ln~LD~~vGDGD~G~tm~~g~~ai~~~l~~~~--~~~~~~~~l~~i~~a~~~~~GGtSG~Ly~~~f~~~a~ 393 (512)
+.|++++++||+||++|||||||+||.+||+++.+.+++ . +..++.++|+.+++.+++.||||||+|||+||+++++
T Consensus 367 ~~l~~~~d~Ln~LD~~VGDGD~GtNM~~G~~av~~~l~~-~~~~~~~~~~~l~~i~~~ll~~~GG~SG~Lyg~~f~~~ak 445 (552)
T 1un8_A 367 ATLSDLETHLNALDAKVGDGDTGSTFAAAAREIASLLHR-QQLPLNNLATLFALIGERLTVVMGGSSGVLMSIFFTAAGQ 445 (552)
T ss_dssp HHHHHTHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHT-TCSBTTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHh-ccCCCCCHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999973 3 4668999999999999999999999999999999999
Q ss_pred HhhccCCCCCCHHH-HHHHHHHHhhCCCCCCcchhhcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccc-hhh
Q 010360 394 KLKASSKSGITSKQ-SSIAAVSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHM-QAQ 471 (512)
Q Consensus 394 ~l~~~~~~~~~~~~-~al~~i~~~g~A~~GDkTMlDaL~Pa~~al~~~~~~g~~~~~~l~~A~~aA~~gae~T~~m-~A~ 471 (512)
.++++ ++++... ++++++++||+++||||||||+|+|+++++++ +.++|++++++|++|+++|++| +|+
T Consensus 446 ~l~~~--~~l~~al~ag~~~i~~~g~AkpGdkTMLDaL~Paaeal~~-------~~~~l~~a~~AA~~gae~T~~m~~A~ 516 (552)
T 1un8_A 446 KLEQG--ANVVEALNTGLAQMKFYGGADEGDRTMIDALQPALTSLLA-------QPKNLQAAFDAAQAGAERTCLSSKAN 516 (552)
T ss_dssp HHHTT--CCHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HhcCC--chHHHHHHHHHHHHHHhcCCCCCCCchhhhHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhCcccchhh
Confidence 99876 4555333 99999999999999999999999999999965 3456899999999999999999 999
Q ss_pred hccccccCCccC-CCCCCchHHHHHHHHHHHHHHHH
Q 010360 472 AGRSTYISPEIL-ASVPDPGAMAAAAWYRAAALAVK 506 (512)
Q Consensus 472 ~GRAsY~gers~-g~vpDPGA~av~~il~al~~~~~ 506 (512)
+|||||+|||++ |++ ||||+++++||+++++.+.
T Consensus 517 ~GRAsYlgers~~Gvv-DpGA~~~~~il~al~~~l~ 551 (552)
T 1un8_A 517 AGRASYLSSESLLGNM-DPGAQRLAMVFKALAESEL 551 (552)
T ss_dssp C--------CCCGGGC-CHHHHHHHHHHHHHHTTC-
T ss_pred hhhhcccchhhcCCCC-CcCHHHHHHHHHHHHHHhc
Confidence 999999999998 775 9999999999999987654
No 2
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=100.00 E-value=9.5e-103 Score=793.42 Aligned_cols=261 Identities=36% Similarity=0.588 Sum_probs=247.6
Q ss_pred CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCc
Q 010360 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (512)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gR 80 (512)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 70 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 149 (332)
T 3ct4_A 70 MLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGR 149 (332)
T ss_dssp SBSEEEEEEETCCCCHHHHHHHHHHHCCSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSSSSCTTCSSS
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEeCCcccCCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCC-CCCCCCcCCCeeEEeccccCCCCccccc
Q 010360 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (512)
Q Consensus 81 RG~aG~v~v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~gval~~c~~P~-~~~~~~l~~~e~E~G~GiHgEpG~~~~~ 159 (512)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 150 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGval~~ctvP~~g~p~f~l~~~emE~G~GIHGEpG~~r~~ 229 (332)
T 3ct4_A 150 RGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPEVGKPGFVLDDNEIEYGVGIHSEPGYRREK 229 (332)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESSCCCCC----------CCEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeecccccccCCC
Q 010360 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239 (512)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G~~~TSl~m~ 239 (512)
++++++++++|+++|+++ ++++++|+|+|||||||+||.+|||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus 230 ~~~a~el~~~m~~~ll~~----~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSldM~ 304 (332)
T 3ct4_A 230 MKTSYELATELVGKLKEE----FKFEAGQKYGILVNGMGATPLMEQFIFMNDVAKLLTEE-NIEILFKKVGNYMTSIDMA 304 (332)
T ss_dssp CCCHHHHHHHHHHHHHHH----HTCCTTCEEEEEEEECBSSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEECSSCCTTBC
T ss_pred CCCHHHHHHHHHHHHHhh----cCcCCCCeEEEEEECCCCcCHHHHHHHHHHHHHHHHHC-CCeEEEEEeeccccccCCC
Confidence 999999999999999986 78889999999999999999999999999999999888 9999999999999999999
Q ss_pred cceEEEeeccH-HHHHhhcCcCCCCCCC
Q 010360 240 GFSISIMKADE-VILKHLDATTKAPHWP 266 (512)
Q Consensus 240 GfSiTll~ld~-~~~~~ldap~~a~~w~ 266 (512)
|||||||++|+ ||++|||+||++|+|+
T Consensus 305 G~SiTll~ldd~el~~lldaP~~tp~w~ 332 (332)
T 3ct4_A 305 GLSLTMIKLEDDQWLKNLNEDVKTISWG 332 (332)
T ss_dssp EEEEEEEECCSHHHHHHHTSCCBCSCC-
T ss_pred ccEEEEEECCHHHHHHHhCCCCCCCCCC
Confidence 99999999999 9999999999999994
No 3
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=100.00 E-value=9.5e-103 Score=796.81 Aligned_cols=267 Identities=39% Similarity=0.624 Sum_probs=251.2
Q ss_pred CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCc
Q 010360 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (512)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gR 80 (512)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 78 MLdaAv~G~VFaSPs~~qi~~ai~av~~g~GvL~ivkNYtGDvlNF~mA~E~a~~eGi~v~~Vvv~DDvAv~~~~~~~gR 157 (366)
T 1oi2_A 78 MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGR 157 (366)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCSSCEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSB
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCC-CCCCCCcCCCeeEEeccccCCCCccccc
Q 010360 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (512)
Q Consensus 81 RG~aG~v~v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~gval~~c~~P~-~~~~~~l~~~e~E~G~GiHgEpG~~~~~ 159 (512)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 158 RGvAGtvlv~KiaGAaAe~G~sL~ev~~~a~~~~~~~~SiGvaL~~ctvP~~g~p~F~l~~~emE~G~GIHGEPG~~r~~ 237 (366)
T 1oi2_A 158 RGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRP 237 (366)
T ss_dssp CCCTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEECC-----------CCTTEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--------------------ccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhh
Q 010360 160 LQPVDVVVSHVLKQILST--------------------ETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE 219 (512)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~--------------------~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~ 219 (512)
++|+++++++|+++|+++ +|.|++++++|+|+|||||||+||.+|||++++++.++|+++
T Consensus 238 ~~sa~elv~~m~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~vLVNgLG~T~~~El~iv~~~v~~~L~~~ 317 (366)
T 1oi2_A 238 FSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQA 317 (366)
T ss_dssp CCCHHHHHHHHHHHHHHSCCEEEEEEEEETTTTEEEEEEEEECCCCTTCEEEEEEEECBSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccccccccccccccccccccccccCCCCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC
Confidence 999999999999999986 155789999999999999999999999999999999999888
Q ss_pred cCCeEEEeeecccccccCCCcceEEEeeccHHHHHhhcCcCCCCCCCCC
Q 010360 220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG 268 (512)
Q Consensus 220 ~gi~v~r~~~G~~~TSl~m~GfSiTll~ld~~~~~~ldap~~a~~w~~~ 268 (512)
||+|+|+|+|+|||||||+|||||||++|+|+++|||+||++|+|||+
T Consensus 318 -gi~v~r~~vG~y~TSLdM~G~SiTLl~lddel~~lldaP~~tpa~~~g 365 (366)
T 1oi2_A 318 -GLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG 365 (366)
T ss_dssp -TCEEEEEEEECSSCCTTBEEEEEEEEEECHHHHHHHHSCEESSSCEEC
T ss_pred -CCeEEEEeeecccCCCCCCccEEEEEecCHHHHHHhCCCCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999974
No 4
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=100.00 E-value=8.7e-103 Score=793.83 Aligned_cols=262 Identities=32% Similarity=0.497 Sum_probs=257.0
Q ss_pred CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCc
Q 010360 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (512)
Q Consensus 1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gR 80 (512)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 66 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 145 (336)
T 2iu4_A 66 MLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRH 145 (336)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCSSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCHHHHHTCCSCC
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhCCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778999
Q ss_pred cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCCCCCCCCcCCCeeEEeccccCCCCcccccC
Q 010360 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADL 160 (512)
Q Consensus 81 RG~aG~v~v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~gval~~c~~P~~~~~~~l~~~e~E~G~GiHgEpG~~~~~~ 160 (512)
||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+.+|+|+|++||||||||||||||++|.++
T Consensus 146 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGvaL~~ctvP~~~p~F~l~~~emE~G~GIHGEpG~~r~~~ 225 (336)
T 2iu4_A 146 RGVAGTILLHKILGAFAKEGGSIDEIEQLALSLSPEIYTLGVALAPVHFPHQKTSFVLAEDEVSFGIGIXGEPGYRVEKF 225 (336)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEEEEECCEETTTEESSCCCTTEEEESCCCCCCCCSEEEEC
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCccCCCCCCCCccCCCceEecccccCCCCccccCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC--CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeecccccccCC
Q 010360 161 QPVDVVVSHVLKQILSTETNYVPIT--RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDM 238 (512)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~~~~~--~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G~~~TSl~m 238 (512)
+|+++++++|+++|+++ ++++ ++|+|+|||||||+||.+|||++++++.++|+++ ||+|+|+|+|+|||||||
T Consensus 226 ~~a~el~~~m~~~ll~~----l~~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSLdM 300 (336)
T 2iu4_A 226 EGSERIAIELVNKLKAE----INWQKKANKNYILLVNGLGSTTLMELYSFQYDVMRLLELE-GLSVKFCKVGNLMTSCDM 300 (336)
T ss_dssp CCHHHHHHHHHHHHHHH----HCGGGCSCCEEEEEEEECBSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCTTB
T ss_pred CCHHHHHHHHHHHHHhh----CccccCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC-CCeEEEEeeecccCccCC
Confidence 99999999999999986 7887 8999999999999999999999999999999888 999999999999999999
Q ss_pred CcceEEEeeccH-HHHHhhcCcCCCCCCCC
Q 010360 239 AGFSISIMKADE-VILKHLDATTKAPHWPV 267 (512)
Q Consensus 239 ~GfSiTll~ld~-~~~~~ldap~~a~~w~~ 267 (512)
+|||||||++|+ ||++|||+||++|+|+.
T Consensus 301 ~G~SiTll~ldd~el~~lldaP~~tpa~~~ 330 (336)
T 2iu4_A 301 SGISLTLCSVKDPKWLDYLNVPTGAFAWLE 330 (336)
T ss_dssp EEEEEEEEECCSTHHHHHHHSCCCCTTCCC
T ss_pred CccEEEEEECCHHHHHHHhcCCCCCcccch
Confidence 999999999999 99999999999999975
No 5
>3pnl_B PTS-dependent dihydroxyacetone kinase, ADP-bindin DHAL; structural genomics, montreal-kingston bacterial structural initiative, BSGI; HET: ADP; 2.20A {Escherichia coli} SCOP: a.208.1.0 PDB: 2btd_A*
Probab=100.00 E-value=6.9e-52 Score=401.79 Aligned_cols=201 Identities=25% Similarity=0.346 Sum_probs=188.9
Q ss_pred ccHHHHHHHHHHHHHHHHHhHHHhhhccCCCCCCchhHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhcCCchh
Q 010360 302 QQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSG 381 (512)
Q Consensus 302 ~~~~~~~~~l~~~~~~li~~e~~Ln~LD~~vGDGD~G~tm~~g~~ai~~~l~~~~~~~~~~~~l~~i~~a~~~~~GGtSG 381 (512)
.+...+++||..+|+.|++++++||+||++|||||||+||.+||+++.+.+++ .+..++.++|..+++.+++.||||||
T Consensus 4 ~~~~~~~~~l~~~~~~l~~~~~~L~~LD~~vGDGD~G~nm~~g~~av~~~l~~-~~~~~~~~~l~~~~~~~~~~~gG~SG 82 (211)
T 3pnl_B 4 LSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPA-IADKDIGFILKNTGMTLLSSVGGASG 82 (211)
T ss_dssp EEHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCSCHHHHHHHHHHHHHHHSGG-GTTSCHHHHHHHHHHHHHTTTCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHcCCCcHH
Confidence 46788999999999999999999999999999999999999999999999984 56678999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCHHH------HHHHHHHHhhCCCCCCcchhhcHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010360 382 ILYHIFCKAAYAKLKASSKSGITSKQ------SSIAAVSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSS 455 (512)
Q Consensus 382 ~Ly~~~f~~~a~~l~~~~~~~~~~~~------~al~~i~~~g~A~~GDkTMlDaL~Pa~~al~~~~~~g~~~~~~l~~A~ 455 (512)
||||+||+++++.++++ ++++..+ .+++.+++||+++||||||||+|+|+++++++..+++.++.++|++++
T Consensus 83 ~L~~~~f~~~a~~l~~~--~~~~~~~~~~al~~a~~~i~~~g~a~~GdkTmlD~l~pa~~a~~~~~~~~~~~~~~l~~a~ 160 (211)
T 3pnl_B 83 PLFGTFFIRAAQATQAR--QSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAAS 160 (211)
T ss_dssp HHHHHHHHHHHHHHCSC--SEEEHHHHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHhHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999999999876 5565555 888999999999999999999999999999998888999999999999
Q ss_pred HHHHHHHHhCccchhhhccccccCCccCCCCCCchHHHHHHHHHHHHHHHH
Q 010360 456 EAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVK 506 (512)
Q Consensus 456 ~aA~~gae~T~~m~A~~GRAsY~gers~g~vpDPGA~av~~il~al~~~~~ 506 (512)
++|++|+++|++|+|++|||||+|||++|++ ||||+++++||++|++.+.
T Consensus 161 ~aA~~g~e~T~~m~a~~GRAsylgers~G~~-DpGA~~~~~il~~l~~~l~ 210 (211)
T 3pnl_B 161 SIAESAAQSTITMQARKGRASYLGERSIGHQ-DPGATSVMFMMQMLALAAK 210 (211)
T ss_dssp HHHHHHHHHGGGSCCCSSGGGGGGGGGTTSC-CHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhchhhhHHhhhhhhccccccCCC-CCcHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999765 9999999999999998764
No 6
>3cr3_A PTS-dependent dihydroxyacetone kinase, ADP- binding subunit DHAL; transient protein-protein complex transferase complex PTS- dependent dihydroxyacetone kinase; HET: ADP; 2.10A {Lactococcus lactis subsp} SCOP: a.208.1.1
Probab=100.00 E-value=1.5e-48 Score=373.10 Aligned_cols=188 Identities=21% Similarity=0.296 Sum_probs=170.9
Q ss_pred cHHHHHHHHHHHHHHHHHhHHHhhhccCCCCCCchhHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhcCCchhh
Q 010360 303 QGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGI 382 (512)
Q Consensus 303 ~~~~~~~~l~~~~~~li~~e~~Ln~LD~~vGDGD~G~tm~~g~~ai~~~l~~~~~~~~~~~~l~~i~~a~~~~~GGtSG~ 382 (512)
+.+.+++||..+++.|++++++||+||++|||||||+||.+||+++.+.+++ .+..++.++|+.+++.+++.|||||||
T Consensus 3 ~~~~~~~~l~~~~~~l~~~~~~L~~LD~~vGDGD~G~nm~~g~~a~~~~l~~-~~~~~~~~~l~~~~~~~~~~~gG~SG~ 81 (192)
T 3cr3_A 3 TIDTTIEWLGKFNEKIQENKAYLSELDGPIGDGDHGANMARGMSETMKALEV-SNFGNVSEIFKKVAMTLMSKVGGASGP 81 (192)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHTTTTSCSCHHHHHHHHHHHHHHHHHH-CCCSSHHHHHHHHHHHHHHHCCSTHHH
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHhcCCCcHHH
Confidence 4677999999999999999999999999999999999999999999999984 566789999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCHHH-HHHHHHHHhhCCCCCCcchhhcHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 010360 383 LYHIFCKAAYAKLKASSKSGITSKQ-SSIAAVSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAG 461 (512)
Q Consensus 383 Ly~~~f~~~a~~l~~~~~~~~~~~~-~al~~i~~~g~A~~GDkTMlDaL~Pa~~al~~~~~~g~~~~~~l~~A~~aA~~g 461 (512)
|||+||+++++.+-+. ..+.... ++++.+++||+++||||||||+|+|+++++++. + +++++|++|
T Consensus 82 L~~~~f~~~a~~l~~~--~~~a~al~~~~~~i~~~g~a~~gdkTmlDal~pa~~a~~~~----------~-~a~~aA~~g 148 (192)
T 3cr3_A 82 LYGSAFLAMSKTAIET--LDTSELIYAGLEAIQKRGKAQVGEKTMVDIWSAFLNDLQTD----------S-ASKDNLEKV 148 (192)
T ss_dssp HHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHTT----------C-CCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHH----------H-HHHHHHHHH
Confidence 9999999999998222 3333333 999999999999999999999999999999653 1 689999999
Q ss_pred HHhCccchhhhccccccCCccCCCCCCchHHHHHHHHHHHHHHH
Q 010360 462 AESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAV 505 (512)
Q Consensus 462 ae~T~~m~A~~GRAsY~gers~g~vpDPGA~av~~il~al~~~~ 505 (512)
+++|++|+|++|||||+|||++|++ ||||+++++||+++.+.+
T Consensus 149 ~e~T~~m~a~~GRAsylgers~G~~-DpGA~~~~~il~~~~~~~ 191 (192)
T 3cr3_A 149 VKASAGLLATKGRASYLGERSIGHI-DPGTQSSAYLFETLLEVV 191 (192)
T ss_dssp HHHGGGSCCCSSGGGGGGGGGTTSC-CHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhHHHHhhhhhccccccCCC-CccHHHHHHHHHHHHHHh
Confidence 9999999999999999999999665 999999999999998865
No 7
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=72.98 E-value=13 Score=36.88 Aligned_cols=94 Identities=12% Similarity=0.102 Sum_probs=66.9
Q ss_pred CCCHHHHHHHHHhc-cCCCCeEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecCcccCCCCCCCCCccccchhh
Q 010360 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (512)
Q Consensus 13 SPs~~~i~~ai~~~-~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~--G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v 87 (512)
-||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++..++ +.+|.+| |- |.--.|.-
T Consensus 67 qps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~~~~~I~Vi---DS-----------~~~s~g~g 132 (297)
T 3nyi_A 67 LPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVI---DS-----------KQNTVTQA 132 (297)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHHHHHHHHCTTCCEEEE---EC-----------SCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEE---eC-----------CchHHHHH
Confidence 48999999999765 3456777775 45677777788888877554 4444433 21 22234444
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccc
Q 010360 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120 (512)
Q Consensus 88 ~v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~ 120 (512)
++..-|-.++++|.|++||.+..++..+++++.
T Consensus 133 ~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~ 165 (297)
T 3nyi_A 133 LLIDQFVRMLEDGLSFEQAMSKLDALMASARIF 165 (297)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEE
Confidence 555557889999999999999999999887765
No 8
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=71.20 E-value=13 Score=37.45 Aligned_cols=199 Identities=14% Similarity=0.103 Sum_probs=108.8
Q ss_pred CCCHHHHHHHHHhc-cCCCCeEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecCcccCCCCCCCCCccccchhh
Q 010360 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (512)
Q Consensus 13 SPs~~~i~~ai~~~-~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~--G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v 87 (512)
.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++...+ +.+|.+ |+- +.--.|.-
T Consensus 98 qPs~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~~~~~I~V--iDS------------~~~s~g~g 163 (320)
T 3pl5_A 98 QVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEI--VDT------------LAATGGEG 163 (320)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHHHHHHHCTTCCEEE--EEC------------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHHHHHhhCCCCeEEE--EcC------------CchHHHHH
Confidence 48999999998765 3456777765 45677767788888877654 344433 321 22334555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceecc--ccccCCC-CCCCCcCCCeeEEeccccCC-CCc--ccccCC
Q 010360 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VCTLPGQ-VTSDRLGPGKMELGLGIHGE-PGA--AVADLQ 161 (512)
Q Consensus 88 ~v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~gval~--~c~~P~~-~~~~~l~~~e~E~G~GiHgE-pG~--~~~~~~ 161 (512)
++..-|-.++++|.|++||.+..++..+++.+.=+-=+ .=.-=|+ .+.--+--+-+-|=-=+|=+ -|. -..+..
T Consensus 164 ~lv~~Aa~l~~~G~s~eeI~~~le~~~~~~~~~f~v~~L~yL~kGGRIs~~~a~iG~lL~IKPIl~~~~dG~l~~~~KvR 243 (320)
T 3pl5_A 164 YLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLSKTSAIVGSLVNIKPLLWLDASGKLVPIAKLR 243 (320)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEECSCSHHHHHHTCCC--------CTTEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECChHHHHhCCCccHHHHHHHhhhCceEEEEEccCCeEEEEeeec
Confidence 56666678999999999999999999998877633100 0000011 00000000001111112222 342 234566
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeecccccccCCCc
Q 010360 162 PVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTSLDMAG 240 (512)
Q Consensus 162 ~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi-~v~r~~~G~~~TSl~m~G 240 (512)
+.+..+++|++.+.+. .. ..+ +.+.+. + . .|. +.++.+.|+++++. .+.-..+|+-+.+==.+|
T Consensus 244 g~kka~~~lv~~~~~~----~~---~~~-v~I~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~ig~vIg~H~GpG 308 (320)
T 3pl5_A 244 GRKKGMKEMLKRATAD----VA---HDT-AVVAYA-N-D--SEA---AENLKEQLLANEKIKNVVTLPLGPVISTHVGPN 308 (320)
T ss_dssp SHHHHHHHHHHHHTSS----CC---SSE-EEEEES-S-C--HHH---HHHHHHHHHTSTTCCEEEEEECCHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHh----cC---CCE-EEEEeC-C-C--HHH---HHHHHHHHHhhcCCCcEEEEEeccEEEEEecCC
Confidence 7778889999888653 22 233 334443 1 1 233 35566777776654 333344565554433333
No 9
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=70.97 E-value=18 Score=35.54 Aligned_cols=205 Identities=10% Similarity=0.083 Sum_probs=108.7
Q ss_pred CCCHHHHHHHHHhccCCCCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCccccchhhhHH
Q 010360 13 SPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVN 90 (512)
Q Consensus 13 SPs~~~i~~ai~~~~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~v~ 90 (512)
.||+.++.++.+ ....||+|- ..-+|=.=+.-+|+++..++--+.++.+|+- |.--.|.-++.
T Consensus 62 qps~~~~~~~f~---~~~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~ViDS------------~~~s~g~g~~v 126 (278)
T 3fdj_A 62 CPGIDAWLEAFG---DDDEIFVVTITAGMSGTYNSAMAARAVYLEEHPQAKVRVIDS------------KSTGPQMRIIL 126 (278)
T ss_dssp CCCHHHHHHHHT---TCSEEEEEESCTTTCSHHHHHHHHHHHHHTTCTTCEEEEEEC------------SSCTHHHHHHH
T ss_pred CCCHHHHHHHHh---cCCcEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEEcC------------CchhHHHHHHH
Confidence 488888888886 345566664 4466766677888888765522233333332 22234555666
Q ss_pred HHHhHHHHcCCCHHHHHHHHHHHHhhhcccceec--cccccCCCCC-CCCcCCCeeEEeccccC-CCCc--ccccCCCHH
Q 010360 91 KIAGAAAAAGLSLADVAAEAKRASEMVGTMGVAL--SVCTLPGQVT-SDRLGPGKMELGLGIHG-EPGA--AVADLQPVD 164 (512)
Q Consensus 91 Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~gval--~~c~~P~~~~-~~~l~~~e~E~G~GiHg-EpG~--~~~~~~~a~ 164 (512)
.-|-.++++|.|++||.+..++..+++++.=+-= ..=.-=|+=. .--+-.+-+-|=-=+|= +-|. -..+..+.+
T Consensus 127 ~~A~~~~~~G~s~~eI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvRg~k 206 (278)
T 3fdj_A 127 EQLQQMIEEGKKFEEIDGAIDAYMQKTRLFCSLKSLHNLAQNGRVSKVVASAAEVLGISVIGTASSHGTLEAIGKCRGDK 206 (278)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESCCHHHHHTTSSCHHHHHGGGSTTEEEEEEECTTSSEEEEEEEESHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcceEEEEECChHHHHHCCcchHHHHHHHHhhCcEEEEEEccCCeEEEeeeecCHH
Confidence 6677899999999999999999998887763310 0000001100 00000000111111232 3342 234555666
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeeeccccc-ccCCCcce
Q 010360 165 VVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYTGSFMT-SLDMAGFS 242 (512)
Q Consensus 165 ~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~g-i~v~r~~~G~~~T-Sl~m~GfS 242 (512)
..+++|++.+.+. .. ...++. +.+. .. .|. +.++.+.|+++++ ..+.-..+|.-++ =.+-.|+.
T Consensus 207 ka~~~l~~~~~~~-----~~-~~~~v~-i~h~--~~--~e~---a~~l~~~l~~~~~~~~i~i~~~g~vi~~h~G~gal~ 272 (278)
T 3fdj_A 207 KLLVKLQALLDDA-----GY-EGGKLR-ICHV--EN--EAL---ADKIADMIKQAYGTTDVCVYKAGGLCSYYAERGGII 272 (278)
T ss_dssp HHHHHHHHHHHHH-----TC-CSCCEE-EEES--SC--HHH---HHHHHHHHHHHHCCCCEEEEECCHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHh-----CC-CCcEEE-EEec--CC--HHH---HHHHHHHHHHhCCCCcEEEEEeCcEEEEEECCCeEE
Confidence 7888888877653 11 223443 3332 12 232 3444555555544 3344445565554 44555566
Q ss_pred EEEe
Q 010360 243 ISIM 246 (512)
Q Consensus 243 iTll 246 (512)
|...
T Consensus 273 i~~~ 276 (278)
T 3fdj_A 273 LSCE 276 (278)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 10
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=69.45 E-value=14 Score=36.72 Aligned_cols=195 Identities=14% Similarity=0.163 Sum_probs=107.5
Q ss_pred CCCHHHHHHHHHhccCCCCeEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecCcccCCCCCCCCCccccchhhh
Q 010360 13 SPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (512)
Q Consensus 13 SPs~~~i~~ai~~~~~~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~--G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~ 88 (512)
.||+.++.++.+. ....||+|- ..-+|=.=+.-+|+++...+ +.+|. +|+- |.--.|.=+
T Consensus 82 qps~~~~~~~f~~--~~~~Ii~i~iSs~LSGTy~sA~~Aa~~~~e~~~~~~I~--ViDS------------~~~s~g~g~ 145 (298)
T 3jr7_A 82 CPSPERYMESYHC--DAERIYVVTLSAELSGSYNSAVLGKNLYEEEYGEKQIH--VFNS------------RSASVGETL 145 (298)
T ss_dssp CCCHHHHHHHHCS--SCSEEEEEESCTTTCSHHHHHHHHHHHHHHHHCCCEEE--EEEC------------SSCTHHHHH
T ss_pred CCCHHHHHHHHHh--cCCeEEEEECCcchhHHHHHHHHHHHHHHhhCCCCeEE--EECC------------CchhHHHHH
Confidence 4899999999884 445677664 44667666777888877654 33333 3322 222345555
Q ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHhhhccccee--ccccccCCC-CCCCCcCCCeeEEeccc-cCCCCc--ccccCCC
Q 010360 89 VNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVCTLPGQ-VTSDRLGPGKMELGLGI-HGEPGA--AVADLQP 162 (512)
Q Consensus 89 v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~gva--l~~c~~P~~-~~~~~l~~~e~E~G~Gi-HgEpG~--~~~~~~~ 162 (512)
+..-|-.++++|.|++||.+..++..+++++.=+- |..=.-=|+ .+.--+-.+-+-|=-=+ +.+-|. -..+..+
T Consensus 146 lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvRg 225 (298)
T 3jr7_A 146 IALKVQQCEKAGMTFEEVVESVECYIEEQHTYFVLENLDTLRKNGRLTGIKSLVAGALNIKPIMGSTPQGTICQKEKARG 225 (298)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCCEEEECSCCHHHHHTTCSTTCCC--CCCTTEEEEEEECTTSCEEEEEEEES
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhCeEEEEeCChHHHHhCCeehHHHHHHHhhcCcEEEEEEccCCeEEEeeecCC
Confidence 66667789999999999999999999988876331 111111111 01100111112222223 234553 2356667
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeecccccc
Q 010360 163 VDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTS 235 (512)
Q Consensus 163 a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi-~v~r~~~G~~~TS 235 (512)
.+..+++|++.+.+. .. +.....+.+.+. + . .|. +.++.+.|+++++. .+.-..+|+-+.+
T Consensus 226 ~kka~~~l~~~~~~~----~~-~~~~~~v~I~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~~g~vig~ 287 (298)
T 3jr7_A 226 MKKALVKMADCVAAD----VV-NAGDKILAIAHC-N-C--EER---AKEVQRLLKERFAVKSSFIVDTSGISTV 287 (298)
T ss_dssp HHHHHHHHHHHHHHH----CC-SGGGCEEEEEES-S-C--HHH---HHHHHHHHHHHCCCSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHHHH----hc-cCCCcEEEEEeC-C-C--HHH---HHHHHHHHHhhcCCCcEEEEEEccEEEE
Confidence 778888888888764 22 112233334432 2 1 232 33555666666553 3444456665543
No 11
>2dt8_A DEGV family protein; fatty acid binding, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: PLM; 1.48A {Thermus thermophilus}
Probab=54.21 E-value=38 Score=33.18 Aligned_cols=93 Identities=18% Similarity=0.118 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHhcc-CCCCeEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCccccchhhh
Q 010360 12 ASPPVDSILAGIHAVT-GPMGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (512)
Q Consensus 12 aSPs~~~i~~ai~~~~-~~~Gvl~iv~--NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~ 88 (512)
+.||+.++.++.+..- .+..||+|-- .-+|= |.- +.+|+.+ ++-++.+|+- +.--.|.=+
T Consensus 62 Sqps~~~~~~~f~~l~~~~~~ii~i~lSs~LSGT---y~s-A~~aa~~-~~~~I~ViDS------------~~~s~g~g~ 124 (280)
T 2dt8_A 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGT---VQS-AELAAQE-FPGRVTVVDT------------QAASLGVGM 124 (280)
T ss_dssp ECCCHHHHHHHHHHHTTSCSEEEEEESCTTTCTH---HHH-HHHHHTT-STTSEEEEEC------------SCCTHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCcHhHH---HHH-HHHHHHh-CCCCEEEECC------------chhHHHHHH
Confidence 3589999999997764 3355666532 22332 222 3333332 1112222221 223355556
Q ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccc
Q 010360 89 VNKIAGAAAAAGLSLADVAAEAKRASEMVGTMG 121 (512)
Q Consensus 89 v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~g 121 (512)
+..-|-.++++|.|++||.+..++..+++++.=
T Consensus 125 ~v~~a~~l~~~G~s~eei~~~l~~~~~~~~~~f 157 (280)
T 2dt8_A 125 MVLRAKELLEEGQSLEAVLAELERLRRDHFVRF 157 (280)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEE
Confidence 666777889999999999999999999887763
No 12
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=53.02 E-value=46 Score=32.71 Aligned_cols=97 Identities=12% Similarity=0.073 Sum_probs=65.2
Q ss_pred CCCCHHHHHHHHHhc-cCCCCeEEEee--ccccccccHHHHHHHHHhc--CCcEEEEEecCcccCCCCCCCCCccccchh
Q 010360 12 ASPPVDSILAGIHAV-TGPMGCLLIVT--NYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (512)
Q Consensus 12 aSPs~~~i~~ai~~~-~~~~Gvl~iv~--NYtGD~lnFg~A~e~a~~~--G~~v~~v~v~DDva~~~~~~~~gRRG~aG~ 86 (512)
+.||+.++.++.+.. ..+..||+|-- .-+|=.=+.-+|+++..++ +.+|. +|+- |..-.|.
T Consensus 63 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~--ViDS------------~~~s~g~ 128 (289)
T 1pzx_A 63 AQPSPLAMKELFLPYAKENRPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLT--IIDS------------KCASLGQ 128 (289)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEE--EEEC------------CCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCchhHHHHHHHHHHHhhHhhCCCCeEE--EEcC------------chhhHHH
Confidence 358999999999765 44456776642 3455555666777765432 43433 2221 2233555
Q ss_pred hhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccce
Q 010360 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (512)
Q Consensus 87 v~v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~gv 122 (512)
-++..-|-.++++|.|++||.+..++..+++++.=+
T Consensus 129 g~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~ 164 (289)
T 1pzx_A 129 GLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIFT 164 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCEEEEE
Confidence 566666778899999999999999999998887643
No 13
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=48.48 E-value=28 Score=30.36 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=53.1
Q ss_pred CHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCccccchhhhHHHHHh
Q 010360 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAG 94 (512)
Q Consensus 15 s~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~v~Ki~G 94 (512)
...+|.++|+.++ +.|||+++== -|=.+|-.++.+... -+|+++ ..| +|.-..-
T Consensus 45 ~~~~i~~ai~~~~-~dgVlvltDL-Ggsp~N~~~al~~~~---~~v~vi------NlP---------------mvega~~ 98 (131)
T 3ct6_A 45 SFDRVMNAIEENE-ADNLLTFFDL-GSARMNLDLVSEMTD---KELTIF------NVP---------------LIEGAYT 98 (131)
T ss_dssp CHHHHHHHHHHSS-CSEEEEEESS-GGGHHHHHHHHHTCS---SEEEEC------CSC---------------HHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCEEEEEeC-CCChHHHHHHHHhcC---CCEEEE------Ehh---------------HHHHHHH
Confidence 4789999999998 6899887754 777788777776532 256554 222 3433333
Q ss_pred H--HHHcCCCHHHHHHHHHHHHhhhcc
Q 010360 95 A--AAAAGLSLADVAAEAKRASEMVGT 119 (512)
Q Consensus 95 A--~A~~G~~l~~v~~~~~~~~~~~~t 119 (512)
| .+..|.+++|+.+.+.....+-||
T Consensus 99 aa~~~~~~~~l~el~~~~~~~~~~~~~ 125 (131)
T 3ct6_A 99 ASALLEAGATFEAIKEQLEKMLIEKRS 125 (131)
T ss_dssp HHHHHHTTCCHHHHHHHHGGGCCCCCC
T ss_pred HHHHhhcCCCHHHHHHHHHHHHhCccc
Confidence 2 346799999998888776555443
No 14
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=47.03 E-value=9 Score=36.11 Aligned_cols=56 Identities=23% Similarity=0.250 Sum_probs=41.6
Q ss_pred eeccCCCCCCCC---HHHHHHHHHhccC-CCCeEEEeecc-------------------------------ccccccHHH
Q 010360 4 AAICGDVFASPP---VDSILAGIHAVTG-PMGCLLIVTNY-------------------------------TGDRLNFGL 48 (512)
Q Consensus 4 aav~G~vFaSPs---~~~i~~ai~~~~~-~~Gvl~iv~NY-------------------------------tGD~lnFg~ 48 (512)
-+..||||-|.. -.|+-+|++.+.. +.|||+....= ..|-=+||+
T Consensus 53 ec~tgDvfgs~rcdcg~qL~~Al~~I~~~G~GVlvyLrqegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygi 132 (196)
T 2bz1_A 53 ECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTL 132 (196)
T ss_dssp CCHHHHTSCCSSCSHHHHHHHHHHHHHHHTSEEEEEECCHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHH
T ss_pred cCChHHHhCCCCCCChHHHHHHHHHHHHhCCEEEEEECCCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHH
Confidence 356799999984 5699999999874 66999887421 125567888
Q ss_pred HHHHHHhcCCc
Q 010360 49 AAEQAKSEGYK 59 (512)
Q Consensus 49 A~e~a~~~G~~ 59 (512)
+++..+.-|++
T Consensus 133 gAqIL~dLGV~ 143 (196)
T 2bz1_A 133 CADMFKLLGVN 143 (196)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 88888887765
No 15
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=41.73 E-value=51 Score=28.60 Aligned_cols=77 Identities=19% Similarity=0.170 Sum_probs=52.8
Q ss_pred CHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhc-CCcEEEEEecCcccCCCCCCCCCccccchhhhHHHHH
Q 010360 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSE-GYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIA 93 (512)
Q Consensus 15 s~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~-G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~v~Ki~ 93 (512)
...+|.++|+.++.+.|||+++== -|=.+|-.++.+....+ .-+|+++ .. -+|.+..
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggsp~N~~~~~~~~~~~~~~~v~vv------Nl---------------Pmv~~~l 107 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSAVLSSELAFDMLEEDQQKHYHLV------DA---------------PLVEGAF 107 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHHHHHHHHHHHHSCHHHHTTEEEC------CS---------------CHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCChhHHHHHHHHhcccccCCEEEE------EH---------------HHHHHHH
Confidence 588999999999999999998754 67778877887765432 2256653 22 2555554
Q ss_pred hH--HHHcCCCHHHHHHHHHHH
Q 010360 94 GA--AAAAGLSLADVAAEAKRA 113 (512)
Q Consensus 94 GA--~A~~G~~l~~v~~~~~~~ 113 (512)
-| .+..|.+++|+.+.+...
T Consensus 108 ~aa~~~~~~~~l~el~~~a~~~ 129 (135)
T 3b48_A 108 ASAITAGVSDDLTQILAEAQNA 129 (135)
T ss_dssp HHHHHHC-CCCHHHHHHHHHTC
T ss_pred HHHHHhhcCCCHHHHHHHHHHH
Confidence 43 345699999998877643
No 16
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=39.69 E-value=19 Score=30.21 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=35.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
..+-|..+|+++..+---++..+.+.|++.+||.+.|+|+
T Consensus 57 a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI 96 (114)
T 3djh_A 57 ALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYI 96 (114)
T ss_dssp EEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEccCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 4556889999999777889999999999999999999997
No 17
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=38.13 E-value=24 Score=29.30 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=36.7
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec
Q 010360 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (512)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G 230 (512)
-+.+=|...||.+..+.-.+++++.+.|++.+|+.+.|+|+=
T Consensus 57 ~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (112)
T 3b64_A 57 VACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 98 (112)
T ss_dssp CEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 355668899999988888999999999999999999999873
No 18
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=37.68 E-value=24 Score=29.33 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=36.1
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
-+.+-|..+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (115)
T 1uiz_A 57 CAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYI 97 (115)
T ss_dssp CEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred eEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 35556888999998888899999999999999999999887
No 19
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=36.34 E-value=22 Score=30.95 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=36.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec
Q 010360 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (512)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G 230 (512)
+.+-|..+|+.+..+--.+++.+.+.|++.+||.+.|+|+=
T Consensus 79 a~v~i~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 79 ACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp EEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 55568899999887778899999999999999999999983
No 20
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=36.33 E-value=19 Score=30.07 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=35.4
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
..+-|..+|+.+...--.+...+.+.|++.+|+.+.|+|+
T Consensus 58 a~v~i~~ig~~~~e~~~~l~~~i~~~l~~~Lgi~~~riyI 97 (114)
T 4dh4_A 58 AFIRVASIGGITSSTNCKIAAALSAACERHLGVPKNRIYT 97 (114)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEcCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 4556889999999777789999999999999999999997
No 21
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=35.75 E-value=30 Score=28.97 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=36.7
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 188 ~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
+-+.+=|.-+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 56 ~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (119)
T 2os5_A 56 PVAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVII 97 (119)
T ss_dssp SCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred CeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 335566888999998888899999999999999999999887
No 22
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=34.82 E-value=25 Score=29.11 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=35.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
+.+=|.-+||.+..+.-.+++++.+.|++.+|+.+.|+|+
T Consensus 57 ~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I 96 (113)
T 1hfo_A 57 AFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYI 96 (113)
T ss_dssp EEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEE
Confidence 4556888999998888899999999999999999999887
No 23
>1mgp_A Hypothetical protein TM841; two domain structure with mixed alpha/beta structures in BOTH domains, structural genomics; HET: PLM; 2.00A {Thermotoga maritima} SCOP: c.119.1.1 PDB: 1vpv_A*
Probab=34.71 E-value=1.4e+02 Score=29.68 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=57.5
Q ss_pred CCCCHHHHHHHHHhcc-CC-CCeEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCccccchhh
Q 010360 12 ASPPVDSILAGIHAVT-GP-MGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (512)
Q Consensus 12 aSPs~~~i~~ai~~~~-~~-~Gvl~iv~--NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v 87 (512)
+.||+.++.++.+..- .+ ..||+|-- .-+|=.=+.-+|+++. ..+ +.+|+- +.--.|.-
T Consensus 89 SqPs~~~~~e~f~~l~~~g~d~Ii~I~iSs~LSGTy~sA~~Aa~~~---~~~--I~ViDS------------~~~s~g~g 151 (313)
T 1mgp_A 89 SQPSVEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNSAVLASKEV---DIP--VYVVDT------------LLASGAIP 151 (313)
T ss_dssp ECCCHHHHHHHHHHHHHTTCSEEEEEESCTTTCSHHHHHHHHHHHS---SSC--EEEEEC------------SCCGGGTH
T ss_pred CCcCHHHHHHHHHHHHHcCCCeEEEEECCccHhHHHHHHHHHHhcC---CCe--EEEEeC------------CcchHHHH
Confidence 3589999999997653 33 25666642 2234333344444432 222 223322 22234445
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHh--hhcccc
Q 010360 88 LVNKIAGAAAAAGLSLADVAAEAKRASE--MVGTMG 121 (512)
Q Consensus 88 ~v~Ki~GA~A~~G~~l~~v~~~~~~~~~--~~~t~g 121 (512)
++..-|-.++++|.|++||.+..++..+ ++++.=
T Consensus 152 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~~~f 187 (313)
T 1mgp_A 152 LPARVAREMLENGATIEEVLKKLDERMKNKDFKAIF 187 (313)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhhCceEEEE
Confidence 5666677889999999999999999999 777663
No 24
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=34.25 E-value=1.6e+02 Score=29.20 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=58.2
Q ss_pred CCCCHHHHHHHHHhccC-CCCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCccccchhhh
Q 010360 12 ASPPVDSILAGIHAVTG-PMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (512)
Q Consensus 12 aSPs~~~i~~ai~~~~~-~~Gvl~iv--~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v~ 88 (512)
+-||+.++.++.+..-. ...||+|- ..-+|=.=+.-+|+++. .+. ++.+|+- |.--.|.-+
T Consensus 96 SqPs~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa~~~--~~~--~I~ViDS------------~~~s~g~g~ 159 (315)
T 3fys_A 96 SQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV--DNI--DVYPFDS------------EISCLAQGF 159 (315)
T ss_dssp ECCCHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGGGGC--SSC--EEEEEEC------------SSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHHHhC--CCC--CEEEECC------------chhHHHHHH
Confidence 35899999999977643 45566664 33344333333333221 122 2223221 233345556
Q ss_pred HHHHHhHHHHcCC-CHHHHHHHHHHHHhhhccc
Q 010360 89 VNKIAGAAAAAGL-SLADVAAEAKRASEMVGTM 120 (512)
Q Consensus 89 v~Ki~GA~A~~G~-~l~~v~~~~~~~~~~~~t~ 120 (512)
+..-|-.++++|. |++||.+..++..+++.+.
T Consensus 160 lv~~Aa~l~~~G~~s~eeI~~~l~~~~~~~~~~ 192 (315)
T 3fys_A 160 YALKAAELIKNGASSPEDIIKELEEMKKTVRAY 192 (315)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHhccEEE
Confidence 6667778999999 9999999999999887765
No 25
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=31.31 E-value=29 Score=28.85 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=36.0
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
-+.+=|..+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (115)
T 2xcz_A 57 TCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYI 97 (115)
T ss_dssp CEEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 34555788999999999999999999999999999999887
No 26
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=30.67 E-value=1.3e+02 Score=29.38 Aligned_cols=93 Identities=11% Similarity=0.088 Sum_probs=58.8
Q ss_pred CCCCHHHHHHHHHhccC-C-CCeEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecCcccCCCCCCCCCccccchhh
Q 010360 12 ASPPVDSILAGIHAVTG-P-MGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (512)
Q Consensus 12 aSPs~~~i~~ai~~~~~-~-~Gvl~iv--~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~gRRG~aG~v 87 (512)
+.||+.++.++.+.... + ..||+|- ..-+|=.=+.-+|+|+. .+.+| .|=| -|..-.|.-
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy~sA~~a~~~~--~~~~I---~ViD-----------S~~~s~g~g 128 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEH--PNLTI---AFPD-----------TKITSAPQG 128 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHHHHHTTHHHHC--TTSEE---ECCC-----------CCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHHHHHHHHHHhC--CCCCE---EEEc-----------CCchHHHHH
Confidence 45899999999976643 3 3566654 33444433333343321 22222 2222 233445666
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccc
Q 010360 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120 (512)
Q Consensus 88 ~v~Ki~GA~A~~G~~l~~v~~~~~~~~~~~~t~ 120 (512)
++..-|-.++++|.|++||.+..++..+++++.
T Consensus 129 ~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~ 161 (285)
T 3lup_A 129 NLVRNALMCSREGMDFDVIVNKIQSQIEKIEGF 161 (285)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEE
Confidence 666677789999999999999999999888765
No 27
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=30.19 E-value=23 Score=30.77 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=35.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec
Q 010360 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (512)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~G 230 (512)
+.+-|..+|+.+..+--.++.++.+.|++.+||.+.|+|+=
T Consensus 79 a~v~v~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~ 119 (133)
T 3fwt_A 79 AYVRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVF 119 (133)
T ss_dssp EEEEEEEEECCCTHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 45557778888887788899999999999999999999983
No 28
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=28.70 E-value=21 Score=31.13 Aligned_cols=40 Identities=15% Similarity=0.118 Sum_probs=31.4
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
+.+-|..+|+.+..+--.++..+.+.|++.+||.+.|+|+
T Consensus 79 a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lgi~~~riyI 118 (135)
T 3t5s_A 79 CFVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYI 118 (135)
T ss_dssp EEEEEECCC-----CCHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEEEEEEEeccCCchHHHHHHHHHHHhcccCccEEEE
Confidence 5566889999988888889999999999999999999998
No 29
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=27.28 E-value=29 Score=29.43 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=31.5
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 189 ~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
-+.+=|..+||.+..+.-.+++++.+.|.+.+|+.+.|+|+
T Consensus 57 ~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I 97 (125)
T 2wkb_A 57 YCFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYI 97 (125)
T ss_dssp CEEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred cEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEE
Confidence 35566889999999888999999999999999999999887
No 30
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=27.23 E-value=1e+02 Score=25.01 Aligned_cols=52 Identities=17% Similarity=0.324 Sum_probs=32.4
Q ss_pred ccCCCCcccccCCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHH
Q 010360 149 IHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAV 213 (512)
Q Consensus 149 iHgEpG~~~~~~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~ 213 (512)
-|+=||.......+..++ +.+++.+. +.|.+.+|+||+ .|+-..+-+-+++.
T Consensus 23 khnypgryirtatssqdi-rdiiksmk---------dngkplvvfvng---asqndvnefqneak 74 (112)
T 2lnd_A 23 KHNYPGRYIRTATSSQDI-RDIIKSMK---------DNGKPLVVFVNG---ASQNDVNEFQNEAK 74 (112)
T ss_dssp HHHSCTTTEEEECSHHHH-HHHHHHHT---------TCCSCEEEEECS---CCHHHHHHHHHHHH
T ss_pred hcCCCCceeeeccchhhH-HHHHHHHH---------hcCCeEEEEecC---cccccHHHHHHHHH
Confidence 388899765555555554 33343332 458899999998 56655555555543
No 31
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=26.63 E-value=1.8e+02 Score=24.59 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=39.6
Q ss_pred ceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEec
Q 010360 3 TAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVG 66 (512)
Q Consensus 3 ~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~ 66 (512)
|.+++..+ +...+++..++.+ +.|.|++......+ +.-..+..+..|.+++.+-+.
T Consensus 102 D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 102 NKAFIGGT---KNIEKIIEILDKK--KINHIVANTIVLEN---AAKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp SEEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCHHH---HHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEECCc---ccHHHHHHHHhhC--CCCEEEEEeccccc---HHHHHHHHHHcCCeEEEEEee
Confidence 45555555 6788899988888 88888887744333 444577778889988877543
No 32
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=23.99 E-value=56 Score=27.79 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=32.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee
Q 010360 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT 229 (512)
Q Consensus 190 v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~~ 229 (512)
+.+-|. ..|.+.-+.-.+++++.+.|.+.+|+.+.++|+
T Consensus 67 ~~I~i~-~~grt~eqK~~l~~~l~~~l~~~lg~~~~~v~I 105 (131)
T 2aal_A 67 VLLTVI-SRPRSEEQKVCFYKLLTGALERDCGISPDDVIV 105 (131)
T ss_dssp EEEEEE-ESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred EEEEEE-eCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 445577 777888888899999999999988999888776
No 33
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=20.01 E-value=3.8e+02 Score=23.25 Aligned_cols=95 Identities=8% Similarity=0.088 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHhcc-cC--CCC---CCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEee--ecccc
Q 010360 162 PVDVVVSHVLKQILSTE-TN--YVP---ITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVY--TGSFM 233 (512)
Q Consensus 162 ~a~~lv~~ml~~ll~~~-~~--~~~---~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~gi~v~r~~--~G~~~ 233 (512)
+..++++.+++.|-+.. .. -+. ...=-++.|+.++ +|.=-...+++++.+.|++. |+.+.++- -..-=
T Consensus 2 ~~~~l~~~i~~al~dkKa~DI~vlDv~~~s~~~DyfVIaTg---~S~rqv~Aiad~v~~~lk~~-g~~~~~~EG~~~~~W 77 (130)
T 2id1_A 2 EIQEISKLAIEALEDIKGKDIIELDTSKLTSLFQRMIVATG---DSNRQVKALANSVQVKLKEA-GVDIVGSEGHESGEW 77 (130)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEEGGGTCSSCSEEEEEEC---SSHHHHHHHHHHHHHHHHHT-TCCCCBCCSTTTSSE
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEcCCCCcccCEEEEEEc---CCHHHHHHHHHHHHHHHHHc-CCcCccccCCCCCCE
Confidence 35677777777765432 00 000 1112357777776 78888999999999999888 98876542 11122
Q ss_pred cccCCCcceEEEeeccH----HHHHhh--cCcC
Q 010360 234 TSLDMAGFSISIMKADE----VILKHL--DATT 260 (512)
Q Consensus 234 TSl~m~GfSiTll~ld~----~~~~~l--dap~ 260 (512)
.-+|..-+-+-++.=+. +|.+|| |+|.
T Consensus 78 vLlD~GdVvVHIf~~e~RefY~LE~LW~~da~~ 110 (130)
T 2id1_A 78 VLVDAGDVVVHVMLPAVRDYYDIEALWGGQKPS 110 (130)
T ss_dssp EEEEETTEEEEEECHHHHHHHCHHHHTTCCCCC
T ss_pred EEEecCCEEEEcCCHHHHhHcCHHHHhcCCCcc
Confidence 23455555555554332 488999 6664
Done!