Query 010361
Match_columns 512
No_of_seqs 186 out of 501
Neff 6.0
Searched_HMMs 46136
Date Thu Mar 28 23:38:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010361.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010361hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06963 FPN1: Ferroportin1 (F 100.0 1.2E-69 2.6E-74 576.6 36.1 361 147-512 2-374 (432)
2 KOG2601 Iron transporter [Inor 100.0 2.3E-42 5.1E-47 353.1 16.5 350 145-512 25-404 (503)
3 PF05977 MFS_3: Transmembrane 100.0 9.8E-33 2.1E-37 301.4 31.3 287 142-470 5-292 (524)
4 PRK11195 lysophospholipid tran 99.9 3E-19 6.4E-24 187.5 31.3 274 146-468 2-277 (393)
5 PRK06814 acylglycerophosphoeth 99.8 4.5E-18 9.7E-23 200.4 29.9 277 145-464 9-293 (1140)
6 TIGR00900 2A0121 H+ Antiporter 99.8 3.1E-16 6.8E-21 158.0 32.7 283 149-470 1-285 (365)
7 PRK10489 enterobactin exporter 99.8 5.6E-17 1.2E-21 170.2 28.1 282 145-470 15-297 (417)
8 PRK08633 2-acyl-glycerophospho 99.7 2.3E-14 5E-19 168.3 29.9 285 145-467 7-304 (1146)
9 PF07690 MFS_1: Major Facilita 99.6 1.9E-13 4.1E-18 137.3 23.2 278 152-470 1-281 (352)
10 PRK05122 major facilitator sup 99.6 3.9E-12 8.5E-17 132.3 29.1 281 141-473 9-290 (399)
11 PRK11652 emrD multidrug resist 99.6 1.5E-11 3.3E-16 127.8 33.3 266 144-460 2-271 (394)
12 TIGR00897 2A0118 polyol permea 99.5 1.4E-11 3.1E-16 129.2 31.4 279 145-465 11-290 (402)
13 PRK15402 multidrug efflux syst 99.5 3.8E-11 8.3E-16 125.5 33.6 279 146-473 8-292 (406)
14 PRK11646 multidrug resistance 99.5 4.5E-11 9.8E-16 125.9 30.9 266 149-467 12-279 (400)
15 TIGR00901 2A0125 AmpG-related 99.5 3.8E-11 8.2E-16 123.0 29.2 265 164-474 5-287 (356)
16 PRK12307 putative sialic acid 99.5 4.1E-11 8.9E-16 125.5 28.9 286 147-472 18-306 (426)
17 TIGR00710 efflux_Bcr_CflA drug 99.5 1.9E-10 4.2E-15 117.6 33.1 271 153-473 11-283 (385)
18 PRK09874 drug efflux system pr 99.5 9.4E-11 2E-15 121.5 30.6 277 146-472 13-298 (408)
19 PRK11902 ampG muropeptide tran 99.5 8.9E-11 1.9E-15 123.1 30.3 275 149-473 4-287 (402)
20 TIGR00891 2A0112 putative sial 99.5 5.7E-11 1.2E-15 121.9 28.3 298 145-471 10-313 (405)
21 PRK10473 multidrug efflux syst 99.4 2.2E-10 4.7E-15 119.1 30.8 273 148-470 4-277 (392)
22 PRK12382 putative transporter; 99.4 2E-10 4.4E-15 119.3 29.4 278 145-474 13-291 (392)
23 PRK11102 bicyclomycin/multidru 99.4 2.9E-10 6.2E-15 116.9 30.0 269 159-474 3-272 (377)
24 PRK11043 putative transporter; 99.4 1.2E-09 2.5E-14 114.0 34.8 274 149-476 5-282 (401)
25 TIGR00881 2A0104 phosphoglycer 99.4 6.9E-11 1.5E-15 119.5 24.1 279 154-463 2-283 (379)
26 PRK03545 putative arabinose tr 99.4 6.8E-10 1.5E-14 115.7 32.0 248 162-463 24-272 (390)
27 PRK10213 nepI ribonucleoside t 99.4 8E-10 1.7E-14 116.2 32.2 231 176-460 48-280 (394)
28 TIGR00899 2A0120 sugar efflux 99.4 3E-10 6.5E-15 116.0 28.1 268 153-470 3-273 (375)
29 PRK11128 putative 3-phenylprop 99.4 1.7E-10 3.8E-15 120.1 26.8 272 149-472 9-280 (382)
30 PRK10091 MFS transport protein 99.4 3.6E-10 7.7E-15 117.7 28.3 272 147-473 3-276 (382)
31 TIGR00893 2A0114 d-galactonate 99.4 3.5E-10 7.6E-15 114.2 26.3 273 161-463 8-282 (399)
32 PRK10054 putative transporter; 99.3 7.9E-10 1.7E-14 116.3 27.7 272 145-469 5-281 (395)
33 TIGR00886 2A0108 nitrite extru 99.3 1.3E-09 2.8E-14 111.2 28.3 287 147-470 1-299 (366)
34 PRK09528 lacY galactoside perm 99.3 9E-10 2E-14 116.0 27.4 288 145-470 8-300 (420)
35 PRK14995 methyl viologen resis 99.3 2.2E-09 4.7E-14 116.4 31.1 294 149-472 8-335 (495)
36 PRK11663 regulatory protein Uh 99.3 1.8E-09 3.9E-14 114.8 28.9 279 148-459 24-306 (434)
37 PRK11551 putative 3-hydroxyphe 99.3 3.2E-09 6.8E-14 110.6 29.7 277 149-470 17-293 (406)
38 cd06174 MFS The Major Facilita 99.3 2.2E-09 4.8E-14 106.9 26.1 250 150-473 2-253 (352)
39 PRK15011 sugar efflux transpor 99.3 6.8E-09 1.5E-13 108.7 31.0 270 148-469 16-289 (393)
40 PRK15403 multidrug efflux syst 99.3 7.6E-09 1.6E-13 109.7 30.8 263 153-464 22-286 (413)
41 TIGR00711 efflux_EmrB drug res 99.3 5.3E-09 1.2E-13 111.1 29.3 289 149-470 4-329 (485)
42 PRK03633 putative MFS family t 99.3 3.4E-09 7.3E-14 110.2 27.0 272 145-472 4-275 (381)
43 PRK03893 putative sialic acid 99.3 5E-09 1.1E-13 112.2 28.8 157 145-322 18-174 (496)
44 TIGR00895 2A0115 benzoate tran 99.2 3.1E-09 6.7E-14 108.4 24.2 280 155-465 25-318 (398)
45 TIGR00890 2A0111 Oxalate/Forma 99.2 1.6E-08 3.5E-13 102.1 29.0 258 166-472 22-280 (377)
46 PRK10504 putative transporter; 99.2 2.5E-08 5.5E-13 106.4 31.0 295 146-470 9-335 (471)
47 TIGR00882 2A0105 oligosacchari 99.2 1.1E-08 2.5E-13 106.7 27.6 287 146-470 1-292 (396)
48 TIGR00902 2A0127 phenyl propri 99.2 1.2E-08 2.5E-13 106.6 27.1 278 148-474 5-282 (382)
49 PRK10133 L-fucose transporter; 99.2 5.5E-08 1.2E-12 104.3 31.9 283 149-472 28-335 (438)
50 PRK11010 ampG muropeptide tran 99.1 6.4E-08 1.4E-12 105.3 31.6 283 145-474 10-301 (491)
51 TIGR00792 gph sugar (Glycoside 99.1 4.4E-08 9.6E-13 102.9 28.9 279 155-472 7-297 (437)
52 PRK11273 glpT sn-glycerol-3-ph 99.1 1.3E-07 2.8E-12 101.2 32.1 283 149-461 27-318 (452)
53 TIGR02718 sider_RhtX_FptX side 99.1 1.7E-07 3.8E-12 97.6 32.1 273 153-472 7-284 (390)
54 TIGR00879 SP MFS transporter, 99.1 4.2E-08 9.1E-13 102.1 27.3 294 158-476 39-363 (481)
55 PRK10429 melibiose:sodium symp 99.1 1.9E-07 4E-12 100.8 31.8 282 155-471 14-305 (473)
56 TIGR00896 CynX cyanate transpo 99.1 7.9E-08 1.7E-12 98.6 27.3 250 168-470 21-271 (355)
57 PRK09556 uhpT sugar phosphate 99.1 2.3E-08 5E-13 107.3 24.3 294 150-468 32-330 (467)
58 TIGR00892 2A0113 monocarboxyla 99.1 1.3E-07 2.8E-12 101.6 29.7 278 150-458 18-302 (455)
59 PRK03699 putative transporter; 99.1 1E-07 2.2E-12 99.8 28.1 271 147-470 7-279 (394)
60 COG2814 AraJ Arabinose efflux 99.0 4.4E-07 9.6E-12 96.4 30.8 274 149-476 11-290 (394)
61 TIGR00712 glpT glycerol-3-phos 99.0 8.5E-07 1.8E-11 94.4 32.2 283 151-463 27-318 (438)
62 TIGR00885 fucP L-fucose:H+ sym 99.0 8.3E-07 1.8E-11 94.4 31.2 152 149-318 5-156 (410)
63 PRK09705 cynX putative cyanate 99.0 2.6E-07 5.6E-12 97.0 25.7 251 166-472 28-280 (393)
64 TIGR00883 2A0106 metabolite-pr 99.0 8.9E-07 1.9E-11 90.0 28.8 54 416-469 238-292 (394)
65 PF13347 MFS_2: MFS/sugar tran 98.9 6.3E-07 1.4E-11 95.1 27.5 271 168-477 22-305 (428)
66 PRK09848 glucuronide transport 98.9 1.4E-06 3.1E-11 92.9 29.9 277 154-472 15-304 (448)
67 PRK09669 putative symporter Ya 98.9 2.8E-06 6.1E-11 90.5 31.3 276 155-471 13-303 (444)
68 TIGR02332 HpaX 4-hydroxyphenyl 98.9 5.8E-07 1.3E-11 95.2 25.2 284 148-464 9-311 (412)
69 TIGR00889 2A0110 nucleoside tr 98.8 1.4E-06 3.1E-11 92.6 26.3 266 163-474 18-293 (418)
70 TIGR00894 2A0114euk Na(+)-depe 98.8 1.9E-06 4E-11 92.1 27.1 248 180-460 74-325 (465)
71 PLN00028 nitrate transmembrane 98.8 5E-06 1.1E-10 90.0 30.4 291 127-462 13-318 (476)
72 COG2211 MelB Na+/melibiose sym 98.8 6.1E-06 1.3E-10 89.6 29.9 273 164-470 29-310 (467)
73 TIGR00903 2A0129 major facilit 98.8 5.5E-06 1.2E-10 87.0 29.0 241 159-449 3-243 (368)
74 PF11700 ATG22: Vacuole efflux 98.8 4.5E-06 9.8E-11 91.1 28.8 93 379-472 263-359 (477)
75 PRK15075 citrate-proton sympor 98.8 4.5E-06 9.8E-11 88.7 27.3 280 149-470 17-312 (434)
76 TIGR00805 oat sodium-independe 98.7 8.4E-07 1.8E-11 99.9 20.9 314 155-486 41-423 (633)
77 TIGR00924 yjdL_sub1_fam amino 98.7 2E-05 4.3E-10 85.7 30.5 161 145-323 8-172 (475)
78 TIGR00788 fbt folate/biopterin 98.7 2.7E-06 5.8E-11 92.3 23.4 282 156-476 35-332 (468)
79 PRK11462 putative transporter; 98.7 3.8E-05 8.3E-10 83.0 31.6 273 155-469 17-300 (460)
80 TIGR01299 synapt_SV2 synaptic 98.7 4.5E-05 9.7E-10 87.6 33.2 154 145-319 161-318 (742)
81 PRK10406 alpha-ketoglutarate t 98.7 2.3E-05 4.9E-10 83.3 28.9 53 417-469 263-316 (432)
82 PRK15034 nitrate/nitrite trans 98.6 0.00031 6.7E-09 76.6 34.7 281 147-476 34-330 (462)
83 PRK10642 proline/glycine betai 98.6 4.4E-05 9.5E-10 82.8 27.4 53 418-470 271-324 (490)
84 PRK09952 shikimate transporter 98.6 5.4E-05 1.2E-09 80.9 27.7 56 418-473 271-327 (438)
85 COG2271 UhpC Sugar phosphate p 98.5 2.3E-05 5E-10 83.6 22.0 308 147-487 29-342 (448)
86 TIGR00898 2A0119 cation transp 98.5 4.4E-05 9.5E-10 82.3 24.8 116 181-317 126-241 (505)
87 PRK10077 xylE D-xylose transpo 98.4 0.00017 3.7E-09 76.8 26.8 52 425-476 299-350 (479)
88 PF05631 DUF791: Protein of un 98.4 7.3E-05 1.6E-09 78.4 22.0 280 151-481 38-328 (354)
89 PRK09584 tppB putative tripept 98.4 0.00091 2E-08 73.3 31.6 161 145-323 19-181 (500)
90 COG0738 FucP Fucose permease [ 98.3 0.00023 5E-09 75.7 25.2 265 161-469 27-309 (422)
91 PF01306 LacY_symp: LacY proto 98.3 8.4E-05 1.8E-09 79.8 20.8 283 145-470 5-297 (412)
92 TIGR00887 2A0109 phosphate:H+ 98.2 0.0029 6.2E-08 68.8 31.2 150 152-317 21-176 (502)
93 KOG2615 Permease of the major 98.2 4.7E-05 1E-09 80.4 15.7 115 180-317 66-181 (451)
94 PRK10207 dipeptide/tripeptide 98.2 0.0044 9.4E-08 67.9 31.5 161 145-323 12-174 (489)
95 TIGR00806 rfc RFC reduced fola 98.1 0.0015 3.3E-08 71.5 27.0 261 167-457 46-323 (511)
96 TIGR01301 GPH_sucrose GPH fami 98.1 0.0052 1.1E-07 67.4 31.4 133 177-315 33-175 (477)
97 COG2270 Permeases of the major 98.1 0.00054 1.2E-08 73.4 22.5 102 379-484 234-337 (438)
98 PF03825 Nuc_H_symport: Nucleo 98.1 0.0018 3.9E-08 69.3 26.2 79 392-470 202-281 (400)
99 PF03209 PUCC: PUCC protein; 98.0 0.0045 9.8E-08 66.2 27.8 253 198-481 30-294 (403)
100 TIGR00899 2A0120 sugar efflux 98.0 0.00053 1.1E-08 70.1 19.7 157 145-323 197-354 (375)
101 PRK15462 dipeptide/tripeptide 98.0 0.03 6.6E-07 61.7 33.1 162 145-324 7-170 (493)
102 KOG1330 Sugar transporter/spin 97.9 4.6E-05 1E-09 82.1 9.4 112 149-273 31-146 (493)
103 PF03092 BT1: BT1 family; Int 97.9 0.0018 4E-08 69.8 21.1 277 165-471 7-294 (433)
104 PRK10504 putative transporter; 97.9 0.00035 7.5E-09 74.7 15.5 158 145-320 259-417 (471)
105 TIGR00892 2A0113 monocarboxyla 97.8 0.00065 1.4E-08 73.2 16.3 156 145-320 239-397 (455)
106 TIGR01272 gluP glucose/galacto 97.8 0.0056 1.2E-07 62.9 22.4 82 393-474 136-220 (310)
107 TIGR00893 2A0114 d-galactonate 97.7 0.0013 2.8E-08 66.4 16.9 160 145-320 213-375 (399)
108 COG2223 NarK Nitrate/nitrite t 97.7 0.04 8.7E-07 59.2 28.0 275 145-471 9-293 (417)
109 TIGR00900 2A0121 H+ Antiporter 97.7 0.0012 2.6E-08 66.5 15.8 155 145-319 208-364 (365)
110 PRK03545 putative arabinose tr 97.7 0.0033 7.1E-08 65.6 19.1 158 145-324 203-361 (390)
111 PRK10489 enterobactin exporter 97.7 0.0028 6.1E-08 66.7 18.4 157 145-323 222-379 (417)
112 cd06174 MFS The Major Facilita 97.6 0.0022 4.7E-08 63.8 16.5 157 147-324 175-333 (352)
113 PRK03633 putative MFS family t 97.6 0.0046 1E-07 64.3 19.3 154 145-322 198-351 (381)
114 TIGR00890 2A0111 Oxalate/Forma 97.6 0.0016 3.5E-08 65.8 15.4 159 145-322 203-361 (377)
115 KOG3764 Vesicular amine transp 97.6 0.0006 1.3E-08 72.6 12.1 232 180-463 104-337 (464)
116 PRK09874 drug efflux system pr 97.6 0.0041 8.9E-08 64.5 18.4 158 145-323 216-378 (408)
117 TIGR00897 2A0118 polyol permea 97.6 0.0088 1.9E-07 62.9 20.6 160 145-323 220-381 (402)
118 PRK15402 multidrug efflux syst 97.5 0.0076 1.7E-07 63.1 19.4 160 145-321 213-373 (406)
119 TIGR00880 2_A_01_02 Multidrug 97.5 0.0022 4.7E-08 55.0 12.6 109 192-321 8-116 (141)
120 PRK03699 putative transporter; 97.5 0.0094 2E-07 62.4 19.5 157 146-325 204-362 (394)
121 TIGR00883 2A0106 metabolite-pr 97.5 0.0038 8.3E-08 63.4 15.8 155 149-320 221-377 (394)
122 TIGR00711 efflux_EmrB drug res 97.4 0.0051 1.1E-07 65.5 16.9 157 145-318 253-410 (485)
123 PRK14995 methyl viologen resis 97.4 0.0041 8.9E-08 67.7 16.4 156 145-318 257-413 (495)
124 KOG0569 Permease of the major 97.4 0.03 6.5E-07 61.6 22.2 90 389-479 257-352 (485)
125 PRK15011 sugar efflux transpor 97.4 0.012 2.7E-07 61.6 18.7 153 147-321 216-369 (393)
126 TIGR02718 sider_RhtX_FptX side 97.4 0.011 2.4E-07 61.6 18.1 162 145-321 206-369 (390)
127 TIGR00895 2A0115 benzoate tran 97.4 0.0047 1E-07 63.0 15.0 147 147-315 250-397 (398)
128 PRK10091 MFS transport protein 97.3 0.035 7.6E-07 57.9 21.6 78 145-222 197-275 (382)
129 PRK11902 ampG muropeptide tran 97.3 0.022 4.7E-07 59.8 20.1 78 145-222 207-286 (402)
130 KOG2532 Permease of the major 97.3 0.081 1.8E-06 58.0 24.9 247 183-461 74-323 (466)
131 TIGR00889 2A0110 nucleoside tr 97.3 0.012 2.5E-07 62.8 17.6 159 145-320 206-373 (418)
132 PRK10054 putative transporter; 97.3 0.0089 1.9E-07 63.0 16.1 158 145-323 204-364 (395)
133 PRK09556 uhpT sugar phosphate 97.3 0.019 4.1E-07 61.8 18.8 153 145-317 256-411 (467)
134 PRK11551 putative 3-hydroxyphe 97.3 0.012 2.5E-07 61.4 16.8 150 149-320 222-372 (406)
135 PF05977 MFS_3: Transmembrane 97.2 0.029 6.4E-07 62.3 20.3 160 146-327 217-378 (524)
136 PRK11128 putative 3-phenylprop 97.2 0.027 5.8E-07 58.8 19.0 155 145-321 203-358 (382)
137 PRK03893 putative sialic acid 97.2 0.0061 1.3E-07 65.4 14.5 137 167-322 295-432 (496)
138 PRK11273 glpT sn-glycerol-3-ph 97.2 0.019 4.2E-07 61.5 17.6 158 145-322 251-414 (452)
139 KOG2533 Permease of the major 97.1 0.019 4E-07 63.4 17.2 241 184-460 83-337 (495)
140 PRK09848 glucuronide transport 97.1 0.03 6.4E-07 59.8 18.1 160 145-320 226-390 (448)
141 TIGR00792 gph sugar (Glycoside 97.1 0.006 1.3E-07 64.1 12.5 159 145-320 220-382 (437)
142 KOG2816 Predicted transporter 97.0 0.033 7.1E-07 61.0 18.0 245 190-476 70-322 (463)
143 PRK10213 nepI ribonucleoside t 97.0 0.053 1.1E-06 57.2 19.1 156 145-323 214-371 (394)
144 TIGR00891 2A0112 putative sial 97.0 0.015 3.2E-07 59.7 14.3 149 152-320 243-392 (405)
145 TIGR01299 synapt_SV2 synaptic 97.0 0.027 5.8E-07 65.1 17.7 114 185-319 598-711 (742)
146 TIGR00902 2A0127 phenyl propri 97.0 0.067 1.5E-06 55.8 19.1 154 145-321 203-358 (382)
147 PRK12382 putative transporter; 96.9 0.04 8.7E-07 57.3 17.0 143 160-325 229-371 (392)
148 PF11700 ATG22: Vacuole efflux 96.9 0.073 1.6E-06 58.4 19.3 168 145-327 279-452 (477)
149 PRK11663 regulatory protein Uh 96.8 0.083 1.8E-06 56.3 19.0 161 145-323 241-404 (434)
150 PRK11010 ampG muropeptide tran 96.8 0.096 2.1E-06 57.2 19.8 77 146-222 221-299 (491)
151 PF13347 MFS_2: MFS/sugar tran 96.8 0.014 3E-07 62.0 12.6 79 145-223 223-301 (428)
152 PRK09669 putative symporter Ya 96.8 0.016 3.4E-07 62.0 12.9 161 144-320 226-390 (444)
153 PRK09705 cynX putative cyanate 96.8 0.094 2E-06 55.1 18.5 155 145-321 203-358 (393)
154 TIGR00881 2A0104 phosphoglycer 96.7 0.027 5.9E-07 56.8 13.5 159 145-320 214-374 (379)
155 PRK12307 putative sialic acid 96.7 0.072 1.6E-06 55.9 17.0 134 169-323 253-388 (426)
156 TIGR00896 CynX cyanate transpo 96.6 0.082 1.8E-06 54.2 16.3 154 145-320 195-350 (355)
157 PRK05122 major facilitator sup 96.6 0.15 3.2E-06 53.1 18.3 145 157-324 226-370 (399)
158 PRK08633 2-acyl-glycerophospho 96.6 0.11 2.3E-06 62.0 19.1 152 145-317 230-383 (1146)
159 TIGR00882 2A0105 oligosacchari 96.5 0.1 2.2E-06 54.6 16.5 159 145-324 213-376 (396)
160 TIGR00894 2A0114euk Na(+)-depe 96.5 0.059 1.3E-06 57.7 14.9 69 145-213 259-328 (465)
161 PRK06814 acylglycerophosphoeth 96.5 0.076 1.6E-06 63.6 17.0 159 145-317 223-395 (1140)
162 TIGR00712 glpT glycerol-3-phos 96.4 0.093 2E-06 55.9 15.4 161 145-323 249-413 (438)
163 PF07690 MFS_1: Major Facilita 96.3 0.022 4.8E-07 57.1 9.9 145 147-309 206-352 (352)
164 PRK09952 shikimate transporter 96.3 0.39 8.5E-06 51.3 20.0 148 155-319 258-407 (438)
165 PRK11195 lysophospholipid tran 96.3 0.4 8.8E-06 50.5 19.6 157 145-323 203-360 (393)
166 TIGR00710 efflux_Bcr_CflA drug 96.3 0.42 9E-06 48.8 19.1 77 145-221 204-281 (385)
167 COG2814 AraJ Arabinose efflux 96.3 0.36 7.9E-06 51.9 18.9 161 145-327 209-370 (394)
168 PRK10473 multidrug efflux syst 96.2 0.41 8.9E-06 49.7 18.9 77 145-221 201-278 (392)
169 PRK15075 citrate-proton sympor 96.2 0.27 5.9E-06 52.3 17.7 54 167-220 258-312 (434)
170 PRK09528 lacY galactoside perm 96.2 0.045 9.7E-07 57.7 11.6 78 392-469 5-83 (420)
171 TIGR00879 SP MFS transporter, 96.1 0.13 2.9E-06 53.5 14.9 143 168-321 305-448 (481)
172 PF06609 TRI12: Fungal trichot 96.1 3.4 7.5E-05 46.9 29.5 76 145-221 38-117 (599)
173 TIGR00898 2A0119 cation transp 96.1 0.19 4.2E-06 54.2 16.0 149 145-317 321-470 (505)
174 PRK11102 bicyclomycin/multidru 96.0 0.4 8.7E-06 49.2 17.6 79 145-223 192-271 (377)
175 PRK11646 multidrug resistance 95.9 0.36 7.9E-06 51.0 17.2 154 145-319 206-360 (400)
176 PRK10429 melibiose:sodium symp 95.9 0.058 1.3E-06 58.4 11.4 163 145-320 229-395 (473)
177 PF01770 Folate_carrier: Reduc 95.9 3.2 7E-05 45.0 26.3 235 197-460 56-313 (412)
178 PRK10406 alpha-ketoglutarate t 95.9 0.6 1.3E-05 49.7 18.8 75 145-219 240-316 (432)
179 PRK15034 nitrate/nitrite trans 95.9 0.32 7E-06 53.3 16.8 75 145-221 250-325 (462)
180 PRK10642 proline/glycine betai 95.9 0.72 1.6E-05 50.1 19.6 62 159-220 262-324 (490)
181 PF12832 MFS_1_like: MFS_1 lik 95.8 0.065 1.4E-06 44.2 8.7 54 416-469 19-72 (77)
182 PRK15403 multidrug efflux syst 95.8 1 2.2E-05 47.8 19.9 157 145-319 216-374 (413)
183 PRK10133 L-fucose transporter; 95.7 0.46 9.9E-06 51.1 16.9 152 145-320 256-409 (438)
184 KOG2504 Monocarboxylate transp 95.7 1.5 3.3E-05 48.7 21.2 255 180-461 79-362 (509)
185 KOG0254 Predicted transporter 95.6 1.9 4.2E-05 47.2 21.7 60 424-484 322-381 (513)
186 TIGR02332 HpaX 4-hydroxyphenyl 95.6 0.34 7.3E-06 51.4 15.2 153 147-320 242-397 (412)
187 PRK11043 putative transporter; 95.3 1.5 3.2E-05 45.7 18.8 154 145-317 201-356 (401)
188 COG2807 CynX Cyanate permease 95.3 5.1 0.00011 42.9 25.5 258 150-465 11-276 (395)
189 COG2223 NarK Nitrate/nitrite t 95.1 0.92 2E-05 49.0 16.5 160 145-320 216-377 (417)
190 TIGR01272 gluP glucose/galacto 95.1 1.3 2.8E-05 45.5 17.1 155 145-324 138-296 (310)
191 PLN00028 nitrate transmembrane 94.8 0.6 1.3E-05 50.7 14.7 68 145-212 250-318 (476)
192 KOG3626 Organic anion transpor 94.8 0.98 2.1E-05 52.1 16.6 106 381-486 376-485 (735)
193 PRK11462 putative transporter; 94.7 0.79 1.7E-05 49.7 15.3 76 144-219 225-300 (460)
194 PTZ00207 hypothetical protein; 94.1 13 0.00028 42.2 27.7 152 146-316 24-180 (591)
195 COG3104 PTR2 Dipeptide/tripept 93.7 14 0.0003 41.1 24.0 168 142-327 16-190 (498)
196 COG0477 ProP Permeases of the 93.7 4.7 0.0001 37.8 16.4 149 152-318 7-158 (338)
197 KOG2532 Permease of the major 93.4 0.93 2E-05 49.8 12.6 157 145-317 256-418 (466)
198 PRK11652 emrD multidrug resist 93.4 3.4 7.4E-05 42.9 16.4 67 145-211 205-272 (394)
199 TIGR00901 2A0125 AmpG-related 93.3 1.5 3.2E-05 44.8 13.3 74 149-223 211-286 (356)
200 KOG0569 Permease of the major 93.3 3 6.5E-05 46.2 16.2 144 173-327 295-439 (485)
201 KOG2563 Permease of the major 93.2 16 0.00034 40.3 24.7 76 386-464 255-333 (480)
202 PRK10077 xylE D-xylose transpo 93.2 3.9 8.4E-05 43.5 16.7 116 184-316 308-424 (479)
203 PF01306 LacY_symp: LacY proto 93.0 0.26 5.7E-06 53.2 7.3 69 402-471 13-82 (412)
204 TIGR00903 2A0129 major facilit 92.5 6.3 0.00014 41.4 16.8 147 145-317 190-341 (368)
205 KOG4686 Predicted sugar transp 92.3 3.3 7.2E-05 43.3 13.8 152 147-320 264-416 (459)
206 TIGR00769 AAA ADP/ATP carrier 92.2 21 0.00047 39.4 26.7 85 385-469 252-340 (472)
207 PF03825 Nuc_H_symport: Nucleo 91.6 1.6 3.4E-05 46.9 11.3 56 408-463 13-68 (400)
208 TIGR00924 yjdL_sub1_fam amino 91.5 1.1 2.5E-05 48.7 10.2 59 416-474 29-91 (475)
209 TIGR00886 2A0108 nitrite extru 91.3 1.5 3.2E-05 44.6 10.3 59 415-473 19-78 (366)
210 PF03137 OATP: Organic Anion T 91.3 0.06 1.3E-06 60.0 0.0 104 382-486 290-398 (539)
211 COG2270 Permeases of the major 90.5 3.7 7.9E-05 44.7 12.6 155 145-321 250-406 (438)
212 TIGR00885 fucP L-fucose:H+ sym 89.9 4.2 9.1E-05 43.3 12.6 56 419-474 25-80 (410)
213 PF06779 DUF1228: Protein of u 89.7 2 4.4E-05 36.4 8.0 61 416-476 11-71 (85)
214 KOG0255 Synaptic vesicle trans 89.7 35 0.00075 37.2 24.6 46 180-225 116-161 (521)
215 KOG2504 Monocarboxylate transp 89.4 9.7 0.00021 42.3 15.3 155 145-320 296-452 (509)
216 PF12832 MFS_1_like: MFS_1 lik 89.1 0.41 8.8E-06 39.5 3.2 47 171-218 24-71 (77)
217 PF03219 TLC: TLC ATP/ADP tran 87.8 20 0.00044 39.7 16.3 85 384-468 267-355 (491)
218 PRK15462 dipeptide/tripeptide 87.6 4.1 9E-05 45.1 10.8 60 416-475 28-89 (493)
219 TIGR00788 fbt folate/biopterin 87.2 2.4 5.1E-05 46.2 8.7 128 180-320 286-415 (468)
220 PRK09584 tppB putative tripept 82.6 12 0.00027 41.0 11.6 60 416-475 40-101 (500)
221 PRK03612 spermidine synthase; 82.5 88 0.0019 34.9 19.8 54 148-205 15-68 (521)
222 KOG2325 Predicted transporter/ 81.8 23 0.00051 39.3 13.2 155 145-317 29-190 (488)
223 KOG0253 Synaptic vesicle trans 80.9 92 0.002 34.1 21.2 137 71-222 13-153 (528)
224 TIGR00805 oat sodium-independe 80.6 9.2 0.0002 43.6 10.0 76 145-220 328-407 (633)
225 PRK10207 dipeptide/tripeptide 79.2 15 0.00032 40.4 10.8 62 416-477 33-96 (489)
226 KOG3762 Predicted transporter 77.5 2.2 4.8E-05 47.8 3.6 52 418-469 32-83 (618)
227 KOG2615 Permease of the major 76.7 26 0.00055 38.1 11.1 141 158-319 265-415 (451)
228 COG2211 MelB Na+/melibiose sym 75.6 16 0.00034 40.4 9.6 77 145-221 234-311 (467)
229 KOG0253 Synaptic vesicle trans 75.3 10 0.00022 41.1 7.7 93 199-312 398-490 (528)
230 TIGR00887 2A0109 phosphate:H+ 73.0 20 0.00042 39.0 9.6 47 428-474 52-98 (502)
231 TIGR01301 GPH_sucrose GPH fami 72.9 14 0.0003 40.9 8.4 52 417-468 24-79 (477)
232 KOG4332 Predicted sugar transp 68.8 42 0.0009 35.1 10.0 37 180-216 70-106 (454)
233 COG2271 UhpC Sugar phosphate p 65.9 30 0.00065 37.9 8.9 83 385-470 18-102 (448)
234 KOG3764 Vesicular amine transp 63.4 22 0.00048 38.8 7.2 165 156-337 279-448 (464)
235 PTZ00207 hypothetical protein; 47.7 2E+02 0.0044 32.8 12.1 52 420-472 49-101 (591)
236 TIGR02973 nitrate_rd_NapE peri 47.1 28 0.0006 25.8 3.3 32 171-202 9-42 (42)
237 PF06796 NapE: Periplasmic nit 46.5 27 0.00058 27.5 3.3 30 173-202 24-55 (56)
238 TIGR02972 TMAO_torE trimethyla 45.7 29 0.00064 26.3 3.3 32 171-202 14-47 (47)
239 COG4262 Predicted spermidine s 45.7 4.4E+02 0.0095 28.8 17.0 58 147-209 7-65 (508)
240 TIGR00880 2_A_01_02 Multidrug 45.6 21 0.00046 29.9 3.1 36 438-473 4-39 (141)
241 KOG3574 Acetyl-CoA transporter 43.2 3.9E+02 0.0085 29.5 12.4 65 393-457 261-325 (510)
242 KOG3810 Micronutrient transpor 42.9 4.8E+02 0.01 28.5 15.4 175 270-457 112-296 (433)
243 TIGR00806 rfc RFC reduced fola 42.3 1.1E+02 0.0023 34.4 8.5 52 418-469 46-99 (511)
244 PF00083 Sugar_tr: Sugar (and 40.1 12 0.00027 39.4 0.9 40 183-222 47-86 (451)
245 COG0738 FucP Fucose permease [ 40.1 2.6E+02 0.0055 30.7 10.7 65 419-487 34-99 (422)
246 KOG0255 Synaptic vesicle trans 37.1 62 0.0014 35.2 5.8 52 427-478 113-164 (521)
247 KOG0254 Predicted transporter 30.3 1.4E+02 0.0031 32.6 7.2 41 432-472 89-129 (513)
248 PF03839 Sec62: Translocation 29.8 1.4E+02 0.003 30.0 6.2 17 439-455 115-131 (224)
249 PF06783 UPF0239: Uncharacteri 29.7 38 0.00083 28.8 2.0 20 462-481 22-42 (85)
250 PF02990 EMP70: Endomembrane p 29.7 8.3E+02 0.018 27.3 15.3 32 431-462 296-327 (521)
251 TIGR00926 2A1704 Peptide:H+ sy 29.2 3.3E+02 0.0071 31.5 10.1 87 415-504 5-96 (654)
252 PF06779 DUF1228: Protein of u 27.3 2.6E+02 0.0056 23.7 6.6 53 170-222 15-67 (85)
253 PF05631 DUF791: Protein of un 27.3 3.4E+02 0.0073 29.1 9.0 43 426-468 63-105 (354)
254 KOG0252 Inorganic phosphate tr 26.8 1.4E+02 0.0029 33.5 6.1 68 154-221 44-123 (538)
255 KOG0252 Inorganic phosphate tr 25.6 1.7E+02 0.0036 32.8 6.5 47 429-475 81-127 (538)
256 PF13955 Fst_toxin: Toxin Fst, 24.7 76 0.0016 20.1 2.1 16 304-319 2-17 (21)
257 KOG0637 Sucrose transporter an 23.2 1.1E+03 0.024 26.5 18.6 122 184-313 69-200 (498)
258 KOG3762 Predicted transporter 22.4 1.3E+02 0.0028 34.3 4.9 46 420-465 394-439 (618)
259 PF06609 TRI12: Fungal trichot 21.4 1.3E+03 0.028 26.6 13.7 30 288-317 437-466 (599)
260 PF05297 Herpes_LMP1: Herpesvi 20.6 33 0.00072 35.5 0.0 33 430-462 103-135 (381)
No 1
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.2e-69 Score=576.64 Aligned_cols=361 Identities=34% Similarity=0.544 Sum_probs=307.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
|..++||++|++|+||||+|+||+||+++.++| |++++|+|++++++..++|||.+|.|+||.+|+++++.+.++|+++
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLS 81 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHH
Confidence 457899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccC--CCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTS--SSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~--~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
++++|+++...+...... ++.....+|+++++++|+++++++++++++||||||+|+++| +.+|+++|++|||||++
T Consensus 82 v~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~-~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 82 VAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGD-PGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCC-hhhHHHHHHHHHHHHHH
Confidence 999988755444333211 234456788889999999999999999999999999999654 56999999999999999
Q ss_pred HHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccccccccccccCCCCCCC------CCCCC
Q 010361 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS--GVLDRAKCSQSCCRTSNEG------PVPDA 375 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~--~~l~~~~~~~~~~~~~~~~------~~~~~ 375 (512)
||++||++.|++++..|+..++.+.+++|++|+ .+|++++.++|+ |+++.++++++.+.+.+++ ..++.
T Consensus 161 ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~---~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFASPVIAAIFIAGWNLASV---FVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSI 237 (432)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhH
Confidence 999999999999999999988888777666654 555678888874 5554443322211111110 01111
Q ss_pred cchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 010361 376 DNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYL 455 (512)
Q Consensus 376 ~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L 455 (512)
.+..++.++++++||+.|++||++++++++++||||| ++||++|++|++++|+++..+|++|+.|++.|++||+++|++
T Consensus 238 ~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~TV-Lsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l 316 (432)
T PF06963_consen 238 LKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFTV-LSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWL 316 (432)
T ss_pred HHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223456677889999999999999999999999998 789999999999999999999999999999999999999999
Q ss_pred HHhhChhhHHHHHHHHHHHHHHHHHHHHhcCCCC-CCchHHHHHHHHHHhhccccccC
Q 010361 456 VRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS-QQNPLLFFLCLIVSMPFYLHSYR 512 (512)
Q Consensus 456 ~rRlG~~ragl~~l~~Q~~~L~~~v~~f~~gs~s-~~~~~~~f~~~i~~sr~gLw~y~ 512 (512)
+||+|+.|+|+|++++|++||.+||+.||....+ +..+.+.|++.|++||+|||+||
T Consensus 317 ~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fD 374 (432)
T PF06963_consen 317 MKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFD 374 (432)
T ss_pred HHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999988854333 35678899999999999999998
No 2
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=353.07 Aligned_cols=350 Identities=23% Similarity=0.339 Sum_probs=278.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
..+.-..||.||++++||||+|+|++.|++..++| |++.+++|+++.....+++||.+|.|+|+.+|+|+++..-++||
T Consensus 25 ls~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqN 104 (503)
T KOG2601|consen 25 LSSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQN 104 (503)
T ss_pred ccceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhcc
Confidence 44556779999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccC--CCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTS--SSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~--~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
+++.++++++...+...... ........++.+...+++.++++.+.++.+||||++++.+++.+..|+++|+.+|+||
T Consensus 105 lSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iD 184 (503)
T KOG2601|consen 105 LSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGID 184 (503)
T ss_pred HHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhh
Confidence 99777766654433322100 1111123344555789999999999999999999999977666778999999999999
Q ss_pred HHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--cccccccccc-----------CCCC-
Q 010361 302 LLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGV--LDRAKCSQSC-----------CRTS- 367 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~--l~~~~~~~~~-----------~~~~- 367 (512)
+.+|+++|+..|.++++.+......+- .+|+..++.++++++.++|.+. ++.++..+.. |..+
T Consensus 185 q~tn~Lapv~tg~Iitfvsl~~~~g~f---~~w~~vsm~~ey~ll~~vy~g~palavs~~~k~~rs~~~q~~~~~~~~s~ 261 (503)
T KOG2601|consen 185 QSTNLLAPVITGLIITFVSLRASAGTF---AAWALVSMWVEYWLLISVYIGVPALAVSKGRKNLRSKESQVELRDCQSSF 261 (503)
T ss_pred hhhhchhhhhhcccceeechhhhhhhh---HHHHHHHHHHHHHHHHHHHhCCcHHhhhcchhhhhhhhheeeeecCCccc
Confidence 999999999999999999876543332 2466667777778888887543 3322211100 0000
Q ss_pred ------CC---CCCCCCc----chhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchh
Q 010361 368 ------NE---GPVPDAD----NIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSII 434 (512)
Q Consensus 368 ------~~---~~~~~~~----~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~i 434 (512)
.+ ++.++.. ...+-..+..+.+|+.|++||++++.+..+++|+++ ++|+.+|+.++...|.|-..+
T Consensus 262 ~v~~~~s~~~~~~~~~~~~~~~~l~~~~~~sF~~~w~~y~nq~vvl~g~slallf~tv-l~f~~L~t~~~~~~G~p~~i~ 340 (503)
T KOG2601|consen 262 PVAGTHSEGFMTNLASRYGILVILPRFSISSFRSAWRVYFNQEVVLPGVSLALLFFTV-LGFGVLMTATLFWPGSPMYII 340 (503)
T ss_pred ccccccceeeeccccccCccccccchhhhHHHHhHHHhhccCeeeehhhHHHHHHHHH-HhhheeeeeeeecCCCCceeh
Confidence 00 0000000 001113456889999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHhhccccccC
Q 010361 435 GGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVSMPFYLHSYR 512 (512)
Q Consensus 435 G~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~~L~~~v~~f~~gs~s~~~~~~~f~~~i~~sr~gLw~y~ 512 (512)
|+.++..+..|+.+++.++...+|.++.|+|.|..|.|+. -+.-+.+.|+..|+.||+|||+||
T Consensus 341 gi~~g~Sa~tg~~~tv~~~~~~~~~nl~rtg~ws~~sq~s--------------v~~isv~ll~agVaaaR~GLW~fD 404 (503)
T KOG2601|consen 341 GIGRGISAGTGLAATVHYPLMQSRTNLLRTGLWSFWSQDS--------------VSKISVYLLFAGVAAARLGLWMFD 404 (503)
T ss_pred hhccCcchhhhhhhhhhcccccCccCCCcceehhhccccc--------------chhHHHHHHHHHHHHHHhhHHhcc
Confidence 9999999999999999999999999999999999998876 123355777788999999999998
No 3
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=9.8e-33 Score=301.39 Aligned_cols=287 Identities=19% Similarity=0.132 Sum_probs=224.8
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 142 TPAHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 142 ~~~~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
+|.+|++|++||+++++|++||.++.+|+++++..+++|+..+|++.++.++|.+++++++|+++||+||||+|+.+|++
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~ 84 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLL 84 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 57799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
+.+..++. ++ .. ..+ ....+.+++..++.|+...++.++.+..++ .++++| +|.++|+.++.+.
T Consensus 85 ~~~~~~~L-~~--l~-~~~----~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip-----~lV~~~---~L~~A~al~s~~~ 148 (524)
T PF05977_consen 85 RALVALLL-AV--LA-FFG----LLSPWLLLILTFLLGIGSAFFNPAWQAIIP-----ELVPKE---DLPAANALNSISF 148 (524)
T ss_pred HHHHHHHH-HH--HH-HhC----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhccHh---hHHHHHHHHHHHH
Confidence 86642221 11 11 111 122345677888999999999999988764 488874 8999999999999
Q ss_pred HHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHH
Q 010361 302 LLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDV 381 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (512)
+++.++||.+||++++.+|+...+ .+|+.++...++ ++.+++.+ ++++ +. ..++
T Consensus 149 niar~iGPalgG~Lva~~G~~~~f----~inalsfl~~i~---~l~~~~~~-----~~~~---------~~-----~~e~ 202 (524)
T PF05977_consen 149 NIARIIGPALGGILVAFFGAAAAF----LINALSFLISIL---ALLRWKPP-----PPPS---------SL-----PRER 202 (524)
T ss_pred HHHHhccchHHHHHHHHHHHHHHH----HHHHHHHHHHHH---HHHHcccc-----cccc---------cc-----chhh
Confidence 999999999999999998765443 445455543332 22332111 1000 00 1235
Q ss_pred hHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 382 GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 382 ~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
.++++++|+||++++|.++..+..+.+++.+..++.++++.|.++ +|.++..||++.++.++|+++|+++.+++.+|++
T Consensus 203 ~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~ 282 (524)
T PF05977_consen 203 FFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLS 282 (524)
T ss_pred hhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 788999999999999998887665544443323455677778775 7999999999999999999999999999999999
Q ss_pred hhhHHHHHHH
Q 010361 461 ILKAGAAGLI 470 (512)
Q Consensus 461 ~~ragl~~l~ 470 (512)
..+....+..
T Consensus 283 ~~~lv~~~~~ 292 (524)
T PF05977_consen 283 SRRLVLLASL 292 (524)
T ss_pred cchhhHHHHH
Confidence 8776555444
No 4
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.86 E-value=3e-19 Score=187.45 Aligned_cols=274 Identities=19% Similarity=0.113 Sum_probs=190.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 146 ~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
+++|+.++.+++++.+||.+..++++.++.+.+.+...++....+..+|..+++|++|.++||++|||+++.+++++.+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLG 81 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHH
Confidence 57899999999999999999999999887666668888999999999999999999999999999999999999887553
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
++.+ .+. . + . ++.-++.|..+....++.+..+. | ++++ +++.++|+.+......+.
T Consensus 82 ---~~~~-~~~--~-----~----~-~~~r~l~G~~~a~~~pa~~a~i~-~----~~~~---~~~~~a~~~~~~~~~~~~ 137 (393)
T PRK11195 82 ---CLLM-LFG--I-----H----P-LLAYGLVGIGAAAYSPAKYGILT-E----LLPG---EKLVKANGWMEGSTIAAI 137 (393)
T ss_pred ---HHHH-HHH--H-----H----H-HHHHHHHHHHHHHHHHHHHHHHH-H----HcCH---HHHHHHHHHHHHHHHHHH
Confidence 1111 111 0 0 1 23334567777777776665443 3 5555 389999999999999999
Q ss_pred HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHH
Q 010361 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (512)
Q Consensus 306 ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (512)
++||.++|.+.+.. . ...+.++...+...+ .....+ |+.+.++++ .+. .....+++
T Consensus 138 ~~Gp~lgG~l~~~~-~----~~~~~i~~~~~~~~~---~~~~~l--~~~~~~~~~-----------~~~---~~~~~~~~ 193 (393)
T PRK11195 138 LLGTVLGGALADPH-A----EAALAVCALIYLLAA---LFNLFI--PRLGARRPG-----------QSW---NPIALLRD 193 (393)
T ss_pred HHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHH---HHHhcC--CCCcccccc-----------cCC---CHHHHHHH
Confidence 99999999998853 1 111222221111111 111222 211100000 000 01234667
Q ss_pred HHHhHhhhhcCcchhHHHHHHH-HHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 386 IKLGWKEYMQQPVLPASLAYVL-LCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 386 i~eG~~~y~~qpvl~asla~al-L~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
.++++++++++|.++..+.... .++.. .....++..|+.+ .|+++.++|.+.+..++|+++|+++++++.+|.+..+
T Consensus 194 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~ 272 (393)
T PRK11195 194 FFHACRVLWRDKLGRFSLAGTTLFWGAG-ATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR 272 (393)
T ss_pred HHHHHHHHHhCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 7889999999998877654433 23221 2233345566664 7999999999999999999999999999999888776
Q ss_pred HHHHH
Q 010361 464 AGAAG 468 (512)
Q Consensus 464 agl~~ 468 (512)
....+
T Consensus 273 ~~~~g 277 (393)
T PRK11195 273 VLPAG 277 (393)
T ss_pred hHHHH
Confidence 55444
No 5
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.82 E-value=4.5e-18 Score=200.42 Aligned_cols=277 Identities=15% Similarity=0.037 Sum_probs=193.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCh-----hHHHHHHHHHHHHHHHccccceeeecccCChhHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIA-LLHPSL-----LPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICL 218 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~-~l~~Sl-----l~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~ 218 (512)
+.++|++||.+++++.+||.+..++++.++. .++.+. ..+++...+..+|+++++|++|.++||++||++|+..
T Consensus 9 ~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~ 88 (1140)
T PRK06814 9 KSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKIL 88 (1140)
T ss_pred hccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHH
Confidence 6789999999999999999999999887765 443333 6688888899999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHH
Q 010361 219 NTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLN 298 (512)
Q Consensus 219 dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~ 298 (512)
+.+..+..++. + +.+... + .+.+++..++.|..+.++.++.+..+ +| +++++ ++.++|+.++
T Consensus 89 ~~~~~~~~~~~--~--~~~~~~----s--~~~l~~~~~l~gi~~a~~~p~~~a~l-~~----~~~~~---~~~~a~~~~~ 150 (1140)
T PRK06814 89 KFAEIGIAALA--I--YGFHLN----S--VPLLFAALFLMGIHSALFGPIKYSIL-PD----HLNKD---ELLGANALVE 150 (1140)
T ss_pred HHHHHHHHHHH--H--HHHHHh----h--HHHHHHHHHHHHHHHHhhchHHHHhh-Hh----hcCcc---ccchhhHHHH
Confidence 76654431111 1 111111 1 34566677788888888888777655 34 55543 8999999999
Q ss_pred HHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcch
Q 010361 299 RIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNI 378 (512)
Q Consensus 299 ~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
....++.++||+++|+++...+....+.. . +......+ .+..++ ++ .++..+ +.+.
T Consensus 151 ~~~~ig~~igp~l~g~l~~~~~~~~~~~~-~---~~~~~~~~---~~~~~~--~~---~~~~~~-------~~~~----- 206 (1140)
T PRK06814 151 AGTFIAILLGTIIGGLATISGNFVILVAL-L---MGIAVLGW---LASLFI--PK---TGNAAP-------DLKI----- 206 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHH-H---HHHHHHHH---HHHhhC--CC---CCCCCC-------CCee-----
Confidence 99999999999999999998765433211 1 11111111 111222 11 110000 0000
Q ss_pred hHHhHHHHHHhHhhhhcCcchhHHHHH-HHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 010361 379 VDVGIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLV 456 (512)
Q Consensus 379 ~~~~~~~i~eG~~~y~~qpvl~asla~-alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~ 456 (512)
..+..++.++++++.+++|.++..+.. .+.++.. ..+.+.++.|+++ .|.++..+|++.+..++|+++|.++.+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~ 285 (1140)
T PRK06814 207 DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVG-AVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLS 285 (1140)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112446678899999999988776443 3444332 3445677888876 799999999999999999999999999998
Q ss_pred HhhChhhH
Q 010361 457 RRLGILKA 464 (512)
Q Consensus 457 rRlG~~ra 464 (512)
+|.+..+.
T Consensus 286 ~~~~~~~~ 293 (1140)
T PRK06814 286 EGRITLLY 293 (1140)
T ss_pred CCceeeee
Confidence 77665543
No 6
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.79 E-value=3.1e-16 Score=157.96 Aligned_cols=283 Identities=14% Similarity=0.104 Sum_probs=192.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~l 228 (512)
|+.++.+++++.+++.+...++|+++.+...+..++++...+..++.++.+|+.|.+.||++|||+++.+.++..+.
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~--- 77 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL--- 77 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH---
Confidence 56789999999999999999999999887669999999999999999999999999999999999999887664332
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHh
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilG 308 (512)
..+..+..... ..+ .+.+++..++.|.......++....+ +.+.++ ++..++|+..+....++.++|
T Consensus 78 -~~~~~~~~~~~--~~~--~~~~~~~~~l~g~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~g~~~g 144 (365)
T TIGR00900 78 -VAVLPFVALLG--GLN--IWQVYVLAGILAIAQAFFTPAYQAML-----PDLVPE---EQLTQANSLSQAVRSLFYIVG 144 (365)
T ss_pred -HHHHHHHHHcC--CCc--HHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCH---HHHHHHHhHHHHHHHHHHHHH
Confidence 11111111111 011 23345555566666666665554332 335554 379999999999999999999
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHH
Q 010361 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKL 388 (512)
Q Consensus 309 P~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~e 388 (512)
|.++|.+....+......+.... .+...+ .+..+..++.+ +++ + + + ..++..++.++
T Consensus 145 ~~l~~~l~~~~g~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~--~~~---------~-~-~---~~~~~~~~~~~ 201 (365)
T TIGR00900 145 PGIGGLMYATLGIKWAIWVDAVG---FAISAL----LIVSVRIPELA--ASE---------I-Q-A---LSNAVLRDTRE 201 (365)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH---HHHHHH----HHHhcccccCC--Ccc---------c-c-c---cchhHHHHHHh
Confidence 99999998877654333222211 111111 11112111110 000 0 0 0 01123456778
Q ss_pred hHhhhhcCcchhHHHHHHHHHHHhhhhhh-HHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHH
Q 010361 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPG-SLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGA 466 (512)
Q Consensus 389 G~~~y~~qpvl~asla~alL~~tvll~~~-~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl 466 (512)
+++..+++|.++..+....++........ ..++.|.++ .|.++..+|.+.+..++++++|.++.+++.||.|..+...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 202 GIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMT 281 (365)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH
Confidence 89999999988776554443332212232 455666665 7999999999999999999999999999999999888766
Q ss_pred HHHH
Q 010361 467 AGLI 470 (512)
Q Consensus 467 ~~l~ 470 (512)
.+..
T Consensus 282 ~~~~ 285 (365)
T TIGR00900 282 GAIF 285 (365)
T ss_pred HHHH
Confidence 5543
No 7
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.79 E-value=5.6e-17 Score=170.20 Aligned_cols=282 Identities=16% Similarity=0.088 Sum_probs=192.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
++|+++.++++++++.+++.+..+++|+++.+.+.+..+++.......++.++.++++|.++||++||+++....++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 15 THPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGL 94 (417)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHH
Confidence 67899999999999999999999999999988888999999999999999999999999999999999999888766544
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
..... .. .. .... .+ .+.+++..++.|....+..++.+.. ++.++++ ++..++|+.......++
T Consensus 95 ~~~~~-~~--~~-~~~~--~~--~~~l~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~g 158 (417)
T PRK10489 95 GFIGL-AL--NA-FLPE--PS--LLAIYLLGLWDGFFGSLGVTALLAA-----TPALVGR---ENLMQAGAITMLTVRLG 158 (417)
T ss_pred HHHHH-HH--HH-HcCC--Cc--HHHHHHHHHHHHHHHHHHHHHHhhh-----hhhccCH---HHHHHHHHHHHHHHhHH
Confidence 21111 11 01 1111 11 2233444445565555554444433 3335554 37899999999999999
Q ss_pred HHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHH
Q 010361 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
.++||.++|.++...+......+.... .+.. . .+..++ ++. ++++ + +. ++..+
T Consensus 159 ~~~g~~l~g~l~~~~~~~~~~~~~~~~---~~~~-~---~~~~~l--~~~---~~~~--------~---~~----~~~~~ 211 (417)
T PRK10489 159 SVISPALGGLLIAAGGVAWNYGLAAAG---TFIT-L---LPLLRL--PAL---PPPP--------Q---PR----EHPLR 211 (417)
T ss_pred HHhHHHHHHHHHHHHhhHHHHHHHHHH---HHHH-H---HHHHhC--CCC---CCCC--------c---cc----ccchH
Confidence 999999999998876544333222211 1111 1 122222 111 1000 0 00 11234
Q ss_pred HHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 385 ~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
+.++++++.+++|.++..+...+++... .++....+.|.++ .|+++..+|++.+..++++++|.++.+++.+|.+..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~ 290 (417)
T PRK10489 212 SLLAGFRFLLASPVVGGIALLGGLLTMA-SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGL 290 (417)
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHHH-HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcch
Confidence 5678899999999877655444433322 3444566778877 8999999999999999999999999999998877666
Q ss_pred HHHHHHH
Q 010361 464 AGAAGLI 470 (512)
Q Consensus 464 agl~~l~ 470 (512)
....+..
T Consensus 291 ~l~~~~~ 297 (417)
T PRK10489 291 LMLLSTL 297 (417)
T ss_pred HHHHHHH
Confidence 5554443
No 8
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.67 E-value=2.3e-14 Score=168.33 Aligned_cols=285 Identities=14% Similarity=0.065 Sum_probs=185.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP---SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~---Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
++++|+.++++++++.++|++...++..++...++ +...+++...+..++.+++++++|.++||++||++|+.+.++
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~ 86 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLF 86 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHH
Confidence 67899999999999999999998888877765544 456678888899999999999999999999999999998876
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
..+..++. .+.... .+ .+.+++..++.|....++.++....+ .| +++++ ++.++|+......
T Consensus 87 ~~~~~~~~----~~~~~~----~~--~~~l~~~r~l~G~~~~~~~~~~~~~i-~~----~~~~~---~r~~~~~~~~~~~ 148 (1146)
T PRK08633 87 EVGLTLLI----VLAYYL----GW--FWLAFAVTFLLGAQSAIYSPAKYGII-PE----LVGKE---NLSRANGLLEAFT 148 (1146)
T ss_pred HHHHHHHH----HHHHHH----cc--HHHHHHHHHHHHHHHHhhchHHHhhh-HH----hcCcc---cchhhhhHHHHHH
Confidence 64432221 111111 11 23445555666777777666554333 33 55543 7999999999999
Q ss_pred HHHHHHhHHHHHHHHhh--------cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCC
Q 010361 302 LLCEIAGASLFGILLSK--------YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVP 373 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~--------~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~ 373 (512)
.++.++||+++|++... ++......+ ...+......+ .....+ ++.+..++.. +..
T Consensus 149 ~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~--~~~~~~~~~~--------~~~- 212 (1146)
T PRK08633 149 IVAILAGTALFSFLFESVNGNTPSEILGRIAPAG--LVLLAVAVLGL---IFAYRL--PKVPAAAPEV--------FDK- 212 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchHHHH--HHHHHHHHHHH---HHHhcC--cCCCCCCccc--------ccc-
Confidence 99999999999999875 221111111 11111111111 111111 1111000000 000
Q ss_pred CCcchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcc-hhHHHHHHHHHHHHHHHHH
Q 010361 374 DADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPS-IIGGFSGLCASMGVAATFL 451 (512)
Q Consensus 374 ~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~-~iG~~~g~gavgGLlGt~l 451 (512)
. .....++.+++++..+++|.++..+....+++.....+...++.|+.+ .|+++. ..|++.+..++|+++|+++
T Consensus 213 ~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~ 288 (1146)
T PRK08633 213 K----KYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLL 288 (1146)
T ss_pred c----ccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011245567889999999977665443333222212344456667764 799999 9999999999999999999
Q ss_pred HHHHHHhhChhhHHHH
Q 010361 452 SAYLVRRLGILKAGAA 467 (512)
Q Consensus 452 ap~L~rRlG~~ragl~ 467 (512)
.+++.+|++..+...+
T Consensus 289 ~g~l~~r~~~~~~~~~ 304 (1146)
T PRK08633 289 AGRLSGRHIELGLVPL 304 (1146)
T ss_pred HHHHhCCceEccchhH
Confidence 9999999886554433
No 9
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.60 E-value=1.9e-13 Score=137.31 Aligned_cols=278 Identities=18% Similarity=0.148 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHH
Q 010361 152 LYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSA 230 (512)
Q Consensus 152 L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~ 230 (512)
|+.+.+++.++..+...++|+++...++ |...++....+..++..+++++.|.++||++||++++.+.++..+. +
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~----~ 76 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG----S 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH----H
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH----H
Confidence 5788999999999999999987777777 8999999999999999999999999999999999999998776442 1
Q ss_pred HHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHH
Q 010361 231 AMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 310 (512)
Q Consensus 231 ~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~ 310 (512)
.+..+. . + .+.+++..++.|.......++....+. | ..+++ +..++++.......++.++||.
T Consensus 77 ~~~~~~---~----~--~~~~~~~~~l~g~~~~~~~~~~~~~i~-~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~ 139 (352)
T PF07690_consen 77 LLLAFA---S----N--FWLLLIARFLLGIGSGFFSPASNALIA-D----WFPPE---ERGRAFGILSAGFSLGSILGPL 139 (352)
T ss_dssp HHHHHH---C----C--HHHHHHHHHHHHHHHHHHHHHHHHHHH-H----CCCTC---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhh---h----h--HHHHhhhcccccccccccccccccccc-c----cchhh---hhhhccccccchhhhhhhcccc
Confidence 111111 1 1 233445555677776676666655443 3 44443 7999999999999999999999
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhH
Q 010361 311 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGW 390 (512)
Q Consensus 311 lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~ 390 (512)
++|.+....+......+.....+... ++ ..... ++.+++++.+ .+.++. ++..+++++++
T Consensus 140 l~~~l~~~~~~~~~~~~~~~~~~~~~---il---~~~~~--~~~~~~~~~~--------~~~~~~----~~~~~~~~~~~ 199 (352)
T PF07690_consen 140 LGGFLISYFGWRWAFLISAILSLIAA---IL---FILFL--PEPPPPRERE--------SPKESE----SKKPKPLKPGF 199 (352)
T ss_dssp HHHHCCCHCHHCCHHHHHHHHHHHHH---HH---HHCCC-----STTTT----------SSTTTT------HHHCCCH-C
T ss_pred hhhhhhhccccccccccccchhhhhh---hh---Hhhhh--hhcccccccc--------cccccc----ccccccccccc
Confidence 99999876664433333222222211 10 00111 1000000000 000000 11223334478
Q ss_pred hhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHH-HhCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHH
Q 010361 391 KEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLN-PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 468 (512)
Q Consensus 391 ~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~-~lGls-~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~ 468 (512)
+..+++|.++..+...+++......+...+..|+. ..|++ +...|.+.+..+++++.+.++.+++.+|+|..+...+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (352)
T PF07690_consen 200 KSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIA 279 (352)
T ss_dssp THHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 88899997653222222222121234556666744 58999 79999999999999999999999999999987766555
Q ss_pred HH
Q 010361 469 LI 470 (512)
Q Consensus 469 l~ 470 (512)
..
T Consensus 280 ~~ 281 (352)
T PF07690_consen 280 IL 281 (352)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.55 E-value=3.9e-12 Score=132.28 Aligned_cols=281 Identities=13% Similarity=0.022 Sum_probs=170.1
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHH
Q 010361 141 ATPAHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLN 219 (512)
Q Consensus 141 ~~~~~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~d 219 (512)
..+.-++++..+.++++++.++..+....+|+++...++ |...++....+..++..+++|+.|.++||++|||+++.++
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~ 88 (399)
T PRK05122 9 SGLRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGL 88 (399)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHH
Confidence 344466789999999999999999999999999888887 9999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHH
Q 010361 220 TVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR 299 (512)
Q Consensus 220 lvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~ 299 (512)
++..+. +..+ ........ ........+++.-++.|+......++....+ +...++ ++..++++....
T Consensus 89 ~~~~~~---~~~~-~~~~~~~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~-----~~~~~~---~~r~~~~~~~~~ 155 (399)
T PRK05122 89 CGCALS---GLLY-LLAGLLAA-WPVLSLLLLLLGRLLLGIGESLAGTGSILWG-----IGRVGA---LHTGRVISWNGI 155 (399)
T ss_pred HHHHHH---HHHH-HHhhhhhc-cchhHHHHHHHHHHHHHhhHHhhcchHHHHH-----HhhcCh---hhhccchhhhhh
Confidence 765432 1111 11100100 0000011233334466666666555443322 224444 267889998888
Q ss_pred HHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchh
Q 010361 300 IDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIV 379 (512)
Q Consensus 300 Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (512)
....+.++||.++|.+....+......+.. ... .+. .+...+ .+ + .++ + +++ +
T Consensus 156 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~---~~~---~~~-~~~~~~--~~--~-~~~-~----------~~~-~--- 208 (399)
T PRK05122 156 ATYGALAIGAPLGVLLYHWGGLAGLGLLIM---LLA---LLG-LLLARP--RP--A-VPP-V----------KGE-R--- 208 (399)
T ss_pred hhhHHHHHHHHHHHHHHHcccHHHHHHHHH---HHH---HHH-HHHHhc--CC--C-CCC-C----------Ccc-c---
Confidence 888899999999999988776432111111 111 111 111111 11 0 000 0 000 0
Q ss_pred HHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 380 DVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 380 ~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
. +.++.++.++++.. ...+..+.. ......++.|.++.|++ ..|...+..++++++|.++.+++.+|+
T Consensus 209 ~----~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~ 276 (399)
T PRK05122 209 L----PFRRVLGRVWPYGM-----GLALASIGF-GTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRL 276 (399)
T ss_pred h----hHHHHHHHHHHHHH-----HHHHHHHHH-HHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 11222222222211 111111111 12233455666667764 446666778888999999999999999
Q ss_pred ChhhHHHHHHHHHH
Q 010361 460 GILKAGAAGLIFQA 473 (512)
Q Consensus 460 G~~ragl~~l~~Q~ 473 (512)
|..|....+.....
T Consensus 277 ~~~~~~~~~~~~~~ 290 (399)
T PRK05122 277 GGLRVAIVSLLVEI 290 (399)
T ss_pred ccHHHHHHHHHHHH
Confidence 98887666554333
No 11
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.55 E-value=1.5e-11 Score=127.78 Aligned_cols=266 Identities=14% Similarity=0.085 Sum_probs=166.1
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHH
Q 010361 144 AHPEGLYALYACCLAGNLVEQLWNFAWPSA--IALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (512)
Q Consensus 144 ~~~r~f~~L~~g~~lS~~Gdri~~FAlpL~--~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dl 220 (512)
.|+++++.+++.-.++..+.....+..|.+ +....+ |...++....+..++.++..++.|.++||++||+++....+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~ 81 (394)
T PRK11652 2 KRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMS 81 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 467889999999888888886666655544 234445 88899999899999999999999999999999999888765
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHH
Q 010361 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (512)
Q Consensus 221 vq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~I 300 (512)
...+. .+.... . .+ .+.+++..++.|.......+.... +.+| ..++ +++.++|+..+..
T Consensus 82 ~~~~~------~~~~~~-~----~~--~~~l~~~~~~~g~~~~~~~~~~~~-~~~~----~~~~---~~~~~~~~~~~~~ 140 (394)
T PRK11652 82 IFILG------TLVALF-A----HS--LTVLIAASAIQGLGTGVGGVMART-LPRD----LYEG---TQLRHANSLLNMG 140 (394)
T ss_pred HHHHH------HHHHHH-H----cc--HHHHHHHHHHHHhhhhHHHHHHHH-HHHH----hcCH---HHHHHHHHHHHHH
Confidence 43221 111111 1 11 122333334444443333333222 2233 2333 3788999999888
Q ss_pred HHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhH
Q 010361 301 DLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVD 380 (512)
Q Consensus 301 dl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
..++.++||.++|.+.+..+......+... ..+...+ .....+ ++. ++ . ++ +
T Consensus 141 ~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~---~~~~~~~---~~~~~~--~~~---~~-~-----------~~-~---- 192 (394)
T PRK11652 141 ILVSPLLAPLIGGLLTTLFGWRACYLFLLL---LGAGVTF---SMARWM--PET---RP-A-----------DA-R---- 192 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChHHHHHHHHH---HHHHHHH---HHHHhC--Ccc---Cc-c-----------cc-c----
Confidence 888999999999999886654332222111 1111111 111111 110 00 0 00 0
Q ss_pred HhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 381 VGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 381 ~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
.++.+++++..+++|.++..+...++.+.....+......|..+ .|+++.+.|++.....++.++|+++.+++.+|.
T Consensus 193 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 270 (394)
T PRK11652 193 --RTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF 270 (394)
T ss_pred --hhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01246778888899877654443333332212233444556665 799999999999999999999999999999998
Q ss_pred C
Q 010361 460 G 460 (512)
Q Consensus 460 G 460 (512)
+
T Consensus 271 ~ 271 (394)
T PRK11652 271 S 271 (394)
T ss_pred H
Confidence 7
No 12
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.53 E-value=1.4e-11 Score=129.22 Aligned_cols=279 Identities=11% Similarity=0.025 Sum_probs=174.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
-+|.+...|.+.++..+++.+...-+|.++.+..-|...++.......+...+++++.|.++||++|||++..+.++..+
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~ 90 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCV 90 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 45789999999999999999877777887755433888999999999999999999999999999999999988865433
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
. ....... .... .+ .+.+++.-++.|............ |++...++ ++..++|+.......++
T Consensus 91 ~---~~~~~~~--~~~~--~~--~~~l~~~~~i~G~g~~~~~~~~~~-----~~~~~~~~---~~~g~~~g~~~~~~~~g 153 (402)
T TIGR00897 91 G---HAAFIVF--GLGH--AN--YPLILLFYGIRGLGYPLFAYSFLV-----WVVYNTKQ---DNLSSAVGWFWAVYSIG 153 (402)
T ss_pred H---HHHHHHH--hccC--cc--HHHHHHHHHHHHcchHHHHhHHHH-----HHHHhCCH---HHHHHHHHHHHHHHHHH
Confidence 2 1111111 1110 11 122233333333332222222222 12223333 37899999999988888
Q ss_pred H-HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhH
Q 010361 305 E-IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 305 k-ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
. +.||.++|.++...+.....+.... +.....++ .+.+. ++ ++++++ + + + + ..+
T Consensus 154 ~~~~g~~~~~~l~~~~g~~~~~~~~~~---~~~~~~~~-~~~~~--~~----~~~~~~---~----~---~-~----~~~ 208 (402)
T TIGR00897 154 IGVFGSYYSSYAIPAFGEMNTLWSALA---FVLTGGVI-ALFSN--KD----IFTPQH---M----Q---T-R----EKF 208 (402)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHH---HHHHHHHH-HHhcc--CC----CCCccc---c----c---C-C----cch
Confidence 6 6899999998876653222222111 11111111 11111 11 001100 0 0 0 0 012
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
++..++++..+++|.++......+++......+....+.|+++.|+++.+.|.+.+...+++++|+++.+++.+|+|..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 288 (402)
T TIGR00897 209 SELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN 288 (402)
T ss_pred hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 34567788899999776654333222211123444567788889999999999999999999999999999999999776
Q ss_pred HH
Q 010361 464 AG 465 (512)
Q Consensus 464 ag 465 (512)
..
T Consensus 289 ~~ 290 (402)
T TIGR00897 289 TV 290 (402)
T ss_pred HH
Confidence 54
No 13
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.52 E-value=3.8e-11 Score=125.50 Aligned_cols=279 Identities=13% Similarity=0.023 Sum_probs=172.1
Q ss_pred CcchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 146 PEGLYAL----YACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 146 ~r~f~~L----~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
+++++.+ ..+++++..+..+....+|.+..+..-|...++.......+...+..+++|.+.||++|||++..+.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 3455554 445555555788888888876655433888888888888999999999999999999999999888754
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
-.+ .+.+..+ .. + .+.+++..++.|.......+.....+. |+ .++ ++..++++.+....
T Consensus 88 ~~~----~~~~~~~---~~----~--~~~l~~~~~l~G~~~~~~~~~~~~~i~-~~----~~~---~~~~~~~~~~~~~~ 146 (406)
T PRK15402 88 FIL----TCLAILL---AQ----S--IEQFTLLRFLQGIGLCFIGAVGYAAIQ-ES----FEE---ADAIKITALMANVA 146 (406)
T ss_pred HHH----HHHHHHH---Hc----c--HHHHHHHHHHHHhHhhhHHHHHHHHHH-HH----hCh---hHHHHHHHHHHHHH
Confidence 322 1111111 11 1 122333344445544444443333332 33 333 26778888888888
Q ss_pred HHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHH
Q 010361 302 LLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDV 381 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (512)
.++.++||.++|.+....+......+..+ ..+...+. ....+ |+.+ ++ + .+ +.
T Consensus 147 ~~~~~~g~~i~~~l~~~~~w~~~~~~~~~---~~~~~~~~---~~~~~--~~~~--~~-~-----------~~-----~~ 199 (406)
T PRK15402 147 LLAPLLGPLVGAALIHVLPWRGMFVLFAA---LAALSFFG---LWRAM--PETA--GR-V-----------GE-----KL 199 (406)
T ss_pred HHHHHHHHHHHHHHHHccCccHHHHHHHH---HHHHHHHH---HHHhC--CCCC--cc-c-----------cc-----cc
Confidence 88899999999999887665443322222 11111111 11111 1110 00 0 00 00
Q ss_pred hHHHHHHhHhhhhcCcchhHHHHH-HHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 382 GIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 382 ~~~~i~eG~~~y~~qpvl~asla~-alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
..++..++++..+++|.++..... .+.++.. ..+....+.|+. ..|+++.++|.......+++++|.++.+++.+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~ 278 (406)
T PRK15402 200 SLKELGRDYKLVLKNRRFVAGALALGLVSLPL-LAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR 278 (406)
T ss_pred cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 124567788889999976654332 2332222 234445566665 4799999999998888889999999999999999
Q ss_pred ChhhHHHHHHHHHH
Q 010361 460 GILKAGAAGLIFQA 473 (512)
Q Consensus 460 G~~ragl~~l~~Q~ 473 (512)
|..|....+...+.
T Consensus 279 ~~~~~~~~~~~~~~ 292 (406)
T PRK15402 279 PLRSLIRMGLWPMV 292 (406)
T ss_pred CHHHHHHHHHHHHH
Confidence 98887666655443
No 14
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.49 E-value=4.5e-11 Score=125.94 Aligned_cols=266 Identities=13% Similarity=0.006 Sum_probs=168.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ 227 (512)
-..++++.++..++..+..--+|.++....+ |...+|+......++.++++++.|.++||++||++++.+++...+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~-- 89 (400)
T PRK11646 12 KYFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAG-- 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHH--
Confidence 3678899999999998888888888877777 9999999999999999999999999999999999999998765442
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 228 ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
+.. ... . .+ .+.+++..++.|+....+.++.+..+. | .+++ +++.++++..+..+.++..+
T Consensus 90 --~~~--~~~-~----~~--~~~l~~~~~l~g~~~~~~~~~~~~~~~-~----~~~~---~~~~~a~~~~~~~~~~g~~i 150 (400)
T PRK11646 90 --FAT--MAI-A----HE--PWLLWLSCILSGLGGTLFDPPRTALVI-K----LIRP---HQRGRFFSLLMMQDSAGAVI 150 (400)
T ss_pred --HHH--HHH-h----cc--HHHHHHHHHHHHHHHHHHHHHHHHHHH-H----hcCH---HHHHHHHHHHHHHHHHHHHH
Confidence 111 111 1 11 223344445556666666555444332 3 4443 37999999999999999999
Q ss_pred hHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHH
Q 010361 308 GASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK 387 (512)
Q Consensus 308 GP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 387 (512)
||.++|.+. ..+......+... ......++ . ... .++ .++. +. .++.+
T Consensus 151 g~~l~g~l~-~~g~~~~f~~~~~---~~~~~~i~---~-~~~-~~~---~~~~------------~~--------~~~~~ 198 (400)
T PRK11646 151 GALLGSWLL-QYDFRLVCATGAV---LFVLAAAF---N-AWL-LPA---YKLS------------TV--------RTPVR 198 (400)
T ss_pred HHHHHHHHH-HhhHHHHHHHHHH---HHHHHHHH---H-HHh-CCc---cccc------------cc--------chhhH
Confidence 999999998 4443322222111 11111111 1 111 111 0000 00 01245
Q ss_pred HhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHH-HHHHHHhhChhhHHH
Q 010361 388 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFL-SAYLVRRLGILKAGA 466 (512)
Q Consensus 388 eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~l-ap~L~rRlG~~ragl 466 (512)
++++.++++|.++........++.........++.|+++.+.++..+|.+.+..+++++.+... .++..||.+..+...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 278 (400)
T PRK11646 199 EGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLM 278 (400)
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 6788888888765543332222221112223456677777678899999998888877755544 444556676655433
Q ss_pred H
Q 010361 467 A 467 (512)
Q Consensus 467 ~ 467 (512)
.
T Consensus 279 ~ 279 (400)
T PRK11646 279 A 279 (400)
T ss_pred H
Confidence 3
No 15
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.48 E-value=3.8e-11 Score=122.99 Aligned_cols=265 Identities=15% Similarity=0.042 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeeccc-----CChhH-HHHHHHHHHHHHHHHHHHHHHHH
Q 010361 164 QLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHS-----PRIPA-YICLNTVQAAAQLLSAAMIIHAH 237 (512)
Q Consensus 164 ri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~-----~Rr~v-mi~~dlvq~~~v~ls~~li~~~~ 237 (512)
.+..+++|.+..+..-|..+++.+... .+|+.+ .+..|.++||+ +|||. ++.++++..+. . .. ..+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~---~-~~--l~~ 76 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSL---L-LI--LSF 76 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHH---H-HH--HHc
Confidence 355678888887763388899999776 888876 99999999998 57775 56666543221 1 11 111
Q ss_pred hhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 010361 238 TVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS 317 (512)
Q Consensus 238 ~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s 317 (512)
. .+ ..+ .+.++...++.+......+++.+. |++..+++ ++..++|+.......+..++||.+++.+..
T Consensus 77 ~-~~-~~~--l~~l~~~~~~~~~~~~~~~~~~~a-----~~~~~~~~---~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~ 144 (356)
T TIGR00901 77 L-VP-STD--LPLLAGLAFLIAFFSATQDIALDA-----WRLEILSD---EELGYGSTIYIVGYRAGMLLSGSLALVLAS 144 (356)
T ss_pred C-Cc-chh--HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhCCH---hhhchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 11 111 233444444555555555555554 34446654 378999999999999999999999999988
Q ss_pred hcc--------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHh
Q 010361 318 KYE--------PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLG 389 (512)
Q Consensus 318 ~~s--------~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG 389 (512)
..+ ......+ .+......++ .. ..+ .++.++++ ++. ++..++.+++
T Consensus 145 ~~g~~~~~~~~wr~~f~i----~ai~~l~~~~--~~-~~~-~~e~~~~~--------------~~~----~~~~~~~~~~ 198 (356)
T TIGR00901 145 PEFANTGLITLWGYIFFW----TALLILPGLL--VT-LFL-AKEPQEDA--------------SVP----KPLTQAVLKP 198 (356)
T ss_pred hcccccccccccHHHHHH----HHHHHHHHHH--HH-HHh-ccCCCccc--------------ccc----hhHHHHHHHH
Confidence 776 2222211 1111111111 11 111 11111000 000 0112345678
Q ss_pred HhhhhcCcc---hhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHH-HHHHHHHHHHHHHHHhhChhhHH
Q 010361 390 WKEYMQQPV---LPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCA-SMGVAATFLSAYLVRRLGILKAG 465 (512)
Q Consensus 390 ~~~y~~qpv---l~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~ga-vgGLlGt~lap~L~rRlG~~rag 465 (512)
++..+++|. +...+...+++........+.++.|+++.|+++.++|.+.+..+ +++++|.++.+++.+|+|..+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l 278 (356)
T TIGR00901 199 IREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL 278 (356)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 888888886 33322222232221123445677888889999999999888655 78899999999999999999887
Q ss_pred HHHHHHHHH
Q 010361 466 AAGLIFQAS 474 (512)
Q Consensus 466 l~~l~~Q~~ 474 (512)
.++...+..
T Consensus 279 ~~~~~~~~~ 287 (356)
T TIGR00901 279 LLFGIVQAL 287 (356)
T ss_pred HHHHHHHHH
Confidence 766655544
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.47 E-value=4.1e-11 Score=125.55 Aligned_cols=286 Identities=13% Similarity=0.086 Sum_probs=175.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v 226 (512)
+.+...|.+.+...++.....++.|.+..+..-|....+.......+..++.+++.|.++||++||+++..+.+...+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~- 96 (426)
T PRK12307 18 NALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVG- 96 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH-
Confidence 4567788888888888888888888776555448888899999999999999999999999999999999888664332
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHH
Q 010361 227 LLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (512)
Q Consensus 227 ~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ki 306 (512)
..+..+. .+ .+.+++.-++.|.......+.....+ .| ..++ ++..++++.....-.++.+
T Consensus 97 ---~~~~~~~-------~~--~~~l~~~r~l~G~g~g~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~lg~~ 156 (426)
T PRK12307 97 ---TGLSGLA-------SG--VIMLTLSRFIVGMGMAGEYACASTYA-VE----SWPK---HLKSKASAFLVSGFGIGNI 156 (426)
T ss_pred ---HHHHHHH-------hH--HHHHHHHHHHHHHHHhhHHHHHHHHH-HH----hCCH---hHhhHhhhHHHHHHhHHHH
Confidence 1111111 11 12334444445544443333322222 13 2333 3678899988888888888
Q ss_pred HhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHH
Q 010361 307 AGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAI 386 (512)
Q Consensus 307 lGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 386 (512)
++|.+++.+....+......+ .+... ++..+.... .|+.++.++++ .++ +.+. .+..+++.
T Consensus 157 ~~~~l~~~l~~~~~w~~~f~i----~~~~~---~~~~~~~~~--~p~~~~~~~~~--~~~---~~~~-----~~~~~~~~ 217 (426)
T PRK12307 157 IAAYFMPSFAEAYGWRAAFFV----GLLPV---LLVIYIRAR--APESKEWEEAK--LSG---KGKH-----SQSAWSVF 217 (426)
T ss_pred HHHHHHHHHcccCCHHHHHHH----HHHHH---HHHHHHHHH--CCCChHHHHhh--hhc---cccc-----cccchhhh
Confidence 888888887765554332222 11111 111111111 12111000000 000 0000 01122334
Q ss_pred HHhHhhhhcCcchhHHHHHHHHHHHhhh---hhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 387 KLGWKEYMQQPVLPASLAYVLLCLNVVL---TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 387 ~eG~~~y~~qpvl~asla~alL~~tvll---~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
.++++..+++|.++..+....+++.... .....++.|+++.|+++..+|.+.+..++++++|.++.+++.+|+|..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 297 (426)
T PRK12307 218 SLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK 297 (426)
T ss_pred hHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 4567788888877654333222221101 1334567777788999999999999999999999999999999999888
Q ss_pred HHHHHHHHH
Q 010361 464 AGAAGLIFQ 472 (512)
Q Consensus 464 agl~~l~~Q 472 (512)
....+....
T Consensus 298 ~~~~~~~~~ 306 (426)
T PRK12307 298 TFSIGLLMS 306 (426)
T ss_pred HHHHHHHHH
Confidence 766665443
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.47 E-value=1.9e-10 Score=117.64 Aligned_cols=271 Identities=15% Similarity=0.043 Sum_probs=168.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHH
Q 010361 153 YACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAM 232 (512)
Q Consensus 153 ~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~l 232 (512)
..-..+..++..++..++|.+..+..-|...++.......+..++.+++.|.++||++||+++..+.++..+. ..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~~ 86 (385)
T TIGR00710 11 GCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS----SLG 86 (385)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH----HHH
Confidence 3334556778888888888877665558888999999999999999999999999999999998876543221 111
Q ss_pred HHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHH
Q 010361 233 IIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLF 312 (512)
Q Consensus 233 i~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lg 312 (512)
..+ . .+ .+.+++..++.|.......+..+..+ .|| .++ ++..++++.......+..++||.++
T Consensus 87 ~~~---~----~~--~~~~~~~~~l~g~~~~~~~~~~~~~~-~~~----~~~---~~~~~~~~~~~~~~~~g~~~g~~~~ 149 (385)
T TIGR00710 87 LAL---S----NN--IETLLVLRFVQAFGASAGSVISQALV-RDI----YPG---EELSRIYSILMPVLALAPAVAPLLG 149 (385)
T ss_pred HHH---H----cc--HHHHHHHHHHHHcchhHHHHHHHHHH-HHh----cCc---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1 11 12233344455555555544444333 343 333 3788999999999999999999999
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhh
Q 010361 313 GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKE 392 (512)
Q Consensus 313 GlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~ 392 (512)
|.+....+......+... ..+..... .... .++. ++.+ + + + ..++..+.++.
T Consensus 150 ~~l~~~~~~~~~~~~~~~---~~~~~~~~---~~~~--~~~~---~~~~--------~-~-~-------~~~~~~~~~~~ 201 (385)
T TIGR00710 150 GYILVWLSWHAIFAFLSL---AGILLSAL---IFFI--LPET---LPYE--------A-R-I-------QISTYFETFLL 201 (385)
T ss_pred HHHHHHcCHHHHHHHHHH---HHHHHHHH---HHHh--CCCC---CCCc--------c-c-C-------CHHHHHHHHHH
Confidence 999887664332222111 11111111 1111 1111 1000 0 0 0 01122445667
Q ss_pred hhcCcchhHHHHHH-HHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHH
Q 010361 393 YMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (512)
Q Consensus 393 y~~qpvl~asla~a-lL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~ 470 (512)
.+++|.++...... +.+... ..+....+.|.. +.|+++...|.+.+..++++++|.++.+++.+|+|..+...++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~ 280 (385)
T TIGR00710 202 LLKSKMFWGYALIYGASFGGF-FAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLI 280 (385)
T ss_pred HHcCchhHHHHHHHHHHHHHH-HHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 77888666543332 222221 222233445555 579999999999999999999999999999999999887666544
Q ss_pred HHH
Q 010361 471 FQA 473 (512)
Q Consensus 471 ~Q~ 473 (512)
...
T Consensus 281 ~~~ 283 (385)
T TIGR00710 281 LFA 283 (385)
T ss_pred HHH
Confidence 333
No 18
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=9.4e-11 Score=121.52 Aligned_cols=277 Identities=13% Similarity=0.061 Sum_probs=162.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh-----hHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHH
Q 010361 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSL-----LPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (512)
Q Consensus 146 ~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sl-----l~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dl 220 (512)
++++..+|.+.+++.+++.++...+|.+..+..-+. ..++.......+...+.+|+.|.+.||++||++++.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 457889999999999999999999999987753232 235777777888999999999999999999999988765
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHH
Q 010361 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (512)
Q Consensus 221 vq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~I 300 (512)
...+. ..+ ... . .+ .+.+++..++.|......... ...+ .+ ..++ ++..++|+.....
T Consensus 93 ~~~~~----~~~--~~~-~----~~--~~~~~~~~~~~g~~~~~~~~~-~~~~-~~----~~~~---~~~~~~~~~~~~~ 150 (408)
T PRK09874 93 GMGIV----MVL--MGL-A----QN--IWQFLILRALLGLLGGFVPNA-NALI-AT----QVPR---NKSGWALGTLSTG 150 (408)
T ss_pred HHHHH----HHH--HHH-H----hh--HHHHHHHHHHHHHhhhhHHhH-HHHH-HH----hcCH---hhhhHHHHHHHHH
Confidence 43321 111 111 1 11 122333333444433333222 2222 22 3333 3678899999999
Q ss_pred HHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhH
Q 010361 301 DLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVD 380 (512)
Q Consensus 301 dl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
..+..++||.++|.+....+......+... ..+...+. ....+ ++. .++.+ +++
T Consensus 151 ~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~--~~~--~~~~~----------~~~------ 204 (408)
T PRK09874 151 GVSGALLGPLAGGLLADSYGLRPVFFITAS---VLFLCFLV---TLFCI--REN--FQPVS----------KKE------ 204 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHH---HHHHHHHH---HHHHh--ccC--ccccc----------chh------
Confidence 999999999999999876654332222211 11111111 11111 110 00000 000
Q ss_pred HhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcc----hhHHHHHHHHHHHHHHHHHHHHHH
Q 010361 381 VGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPS----IIGGFSGLCASMGVAATFLSAYLV 456 (512)
Q Consensus 381 ~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~----~iG~~~g~gavgGLlGt~lap~L~ 456 (512)
..+.++.++...+++.++..+...+.+......+...+..|..+.+.+.. ..|.+.++.+++++++....+++.
T Consensus 205 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~ 282 (408)
T PRK09874 205 --MLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLG 282 (408)
T ss_pred --hhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01123444444444444443333333222212344566677776433333 356667777888889999999999
Q ss_pred HhhChhhHHHHHHHHH
Q 010361 457 RRLGILKAGAAGLIFQ 472 (512)
Q Consensus 457 rRlG~~ragl~~l~~Q 472 (512)
+|+|..+....+....
T Consensus 283 dr~g~~~~~~~~~~~~ 298 (408)
T PRK09874 283 DRIGPEKILITALIFS 298 (408)
T ss_pred hccccchhHHHHHHHH
Confidence 9999888776665543
No 19
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.46 E-value=8.9e-11 Score=123.09 Aligned_cols=275 Identities=16% Similarity=0.047 Sum_probs=169.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeeccc-----CCh-hHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHS-----PRI-PAYICLNTVQ 222 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~-----~Rr-~vmi~~dlvq 222 (512)
|..||..|. +.-.....++|.++-+..-|.-++|++... .+| .++.|+.|.++||+ +|| +.++.++++.
T Consensus 4 ~~~l~~~~~---~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~-~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~ 78 (402)
T PRK11902 4 MLLLGFASG---LPLALTSGTLQAWMTVEGLDIQTIGFFSLV-GQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGL 78 (402)
T ss_pred HHHHHHHHh---hhHHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHH
Confidence 455665554 466788899999998763399999999665 456 58999999999999 454 5788887654
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+. ...+.+ ... ..+ .+.+++..++.+......+++.+..+ +..+++ ++..++|+.......
T Consensus 79 ~l~----~~~l~~---~~~-~~~--~~~l~~~~~~~~~~~~~~~~~~~al~-----~~~~~~---~~r~~~~~~~~~g~~ 140 (402)
T PRK11902 79 AAS----IAAMAF---CPP-HAA--LWPLAGLAVLVAFLSASQDIVFDAYS-----TDVLHP---EERGAGAAVKVLGYR 140 (402)
T ss_pred HHH----HHHHHh---cCc-cch--HHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhcCh---hhhhHHHHHHHHHHH
Confidence 332 111111 111 111 22334444445555556555555433 334444 378999999998889
Q ss_pred HHHHHhHHHHHHHHhh-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHH
Q 010361 303 LCEIAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDV 381 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~-~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (512)
++.++|+.+++.+.+. .+......+.... .+...+ ....+ ++.+++++ +. ++
T Consensus 141 ~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~---~l~~~l----~~~~~--~e~~~~~~--------------~~----~~ 193 (402)
T PRK11902 141 LAMLVSGGLALWLADRVLGWGNTYLLMAGL---MLAGAL----TTLWA--PEPEVPAR--------------PP----RS 193 (402)
T ss_pred HHHHHHhHHHHHHHhcccCHHHHHHHHHHH---HHHHHH----HHHhc--CCCccccc--------------cc----ch
Confidence 9999999999999884 3544433332221 111111 11111 21111000 00 01
Q ss_pred hHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 010361 382 GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGL-CASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 382 ~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~-gavgGLlGt~lap~L~rRl 459 (512)
..++.+++++.+++||.++..+...+++...........+.|+. +.|+++..+|++.+. +.+++++|.++.+++.+|+
T Consensus 194 ~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~ 273 (402)
T PRK11902 194 LGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL 273 (402)
T ss_pred hHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 12346778999999998877655544433210122234444554 489999999999865 4567899999999999999
Q ss_pred ChhhHHHHHHHHHH
Q 010361 460 GILKAGAAGLIFQA 473 (512)
Q Consensus 460 G~~ragl~~l~~Q~ 473 (512)
|..|....+...+.
T Consensus 274 g~~~~l~~~~~~~~ 287 (402)
T PRK11902 274 GLYRSLMLFGVLQA 287 (402)
T ss_pred hHHHHHHHHHHHHH
Confidence 98887665555443
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.46 E-value=5.7e-11 Score=121.92 Aligned_cols=298 Identities=11% Similarity=0.041 Sum_probs=169.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+.+.+..++.+++.+.++..+..+..|-+..+..-|..+++.......+..++.+++.|.++||++||+++..+.++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 89 (405)
T TIGR00891 10 QWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSA 89 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44567788999999999999999999977655444888999999999999999999999999999999999887654332
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
. ..+..+. .+ .+.+++..++.|.......+.....+ .||. ++ ++..++++.......++
T Consensus 90 ~----~~~~~~~-------~~--~~~l~~~~~l~G~~~~~~~~~~~~~i-~~~~----~~---~~~~~~~~~~~~~~~~g 148 (405)
T TIGR00891 90 G----TLACGFA-------PG--YITMFIARLVIGIGMGGEYGSSAAYV-IESW----PK---HLRNKASGLLISGYAVG 148 (405)
T ss_pred H----HHHHHHh-------cc--HHHHHHHHHHHHhhhhhhhHHHHHHH-HHhC----Ch---hhhhHHHHHHHHHHHHH
Confidence 1 1111111 11 22344444555655555444433322 2433 33 37899999999999999
Q ss_pred HHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCC--CCCCcchhHHh
Q 010361 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGP--VPDADNIVDVG 382 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 382 (512)
.++||.+++.+....+......+ .+.+... .+. .+...++ |+.++.++.++..++..+.. ..+.....+..
T Consensus 149 ~~~~~~l~~~l~~~~~~~w~~~f--~~~~~~~--~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (405)
T TIGR00891 149 AVVAAQVYSLVVPVWGDGWRALF--FISILPI--IFA-LWLRKNI--PEAEDWKEKHAGKALVRTMVDILYGGEHRIANI 221 (405)
T ss_pred HHHHHHHHHHHHHhcCccHHHHH--HHHHHHH--HHH-HHHHHhC--CCChhHHHHhhhhhhhhhHHHHHhccchhhhhh
Confidence 99999999999876552111111 1111111 111 1111221 22111000000000000000 00000000000
Q ss_pred HHHHHHhHhhhhcCc--chhHHHH-HHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 010361 383 IEAIKLGWKEYMQQP--VLPASLA-YVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR 458 (512)
Q Consensus 383 ~~~i~eG~~~y~~qp--vl~asla-~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rR 458 (512)
.++....++...+++ .+...+. ..+.++.. ......++.|++ +.|+++.++|.+.+..++++++|.++.+++.+|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 300 (405)
T TIGR00891 222 VMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYS-HPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW 300 (405)
T ss_pred hhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111111111 1111111 11222211 123345677776 479999999999999999999999999999999
Q ss_pred hChhhHHHHHHHH
Q 010361 459 LGILKAGAAGLIF 471 (512)
Q Consensus 459 lG~~ragl~~l~~ 471 (512)
+|..+....+...
T Consensus 301 ~g~~~~~~~~~~~ 313 (405)
T TIGR00891 301 LGRRKAYVCSLLA 313 (405)
T ss_pred hCchhhhHHHHHH
Confidence 9988876655543
No 21
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.43 E-value=2.2e-10 Score=119.09 Aligned_cols=273 Identities=15% Similarity=0.081 Sum_probs=164.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHH
Q 010361 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (512)
Q Consensus 148 ~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ 227 (512)
-.+..+..-.....|..++..++|.+..+...|...++.......+..++..|+.|.++||++||+++....+.-.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i--- 80 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII--- 80 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH---
Confidence 34556777888899999999999999888666888888888888899999999999999999999998876544222
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 228 ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
...+..+ . .+ .+.+++.-++.|.......+.....+ .| ..++ ++..++++....+..++.++
T Consensus 81 -~~~~~~~---~----~~--~~~~~~~~~l~g~~~~~~~~~~~~~i-~~----~~~~---~~r~~~~~~~~~~~~i~~~~ 142 (392)
T PRK10473 81 -ASLLCSL---A----ET--SSLFLAGRFLQGIGAGCCYVVAFAIL-RD----TLDD---RRRAKVLSLLNGITCIIPVL 142 (392)
T ss_pred -HHHHHHH---h----Cc--HHHHHHHHHHHHhhhhHHHHHHHHHH-HH----HcCH---HHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1 11 12223333444554444343332222 23 3333 37889999999999999999
Q ss_pred hHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHH
Q 010361 308 GASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK 387 (512)
Q Consensus 308 GP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 387 (512)
||.+++.+....+......+.. +..+...++ ....+ ++. ++++ +++.. +. .
T Consensus 143 ~~~i~~~l~~~~g~~~~~~~~~---~~~~i~~~~---~~~~~--~~~---~~~~----------~~~~~----~~----~ 193 (392)
T PRK10473 143 APVLGHLIMLKFPWQSLFYTMA---AMGILVLLL---SLFIL--KET---RPAR----------APAAS----SK----P 193 (392)
T ss_pred HHHHHHHHHhCcChHHHHHHHH---HHHHHHHHH---HHHHc--CCC---CCcc----------cCCcc----ch----H
Confidence 9999999877655332222211 111111111 11111 111 1000 00000 00 1
Q ss_pred HhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHH
Q 010361 388 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGA 466 (512)
Q Consensus 388 eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl 466 (512)
+..+..+++|.++.......+.+.....+....+.|.. +.|+++..+|.+.+..++++++|.++.+++.+|+|..+...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~ 273 (392)
T PRK10473 194 RENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLML 273 (392)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 11223456665444332222222211223233344554 47999999999999999999999999999999999888766
Q ss_pred HHHH
Q 010361 467 AGLI 470 (512)
Q Consensus 467 ~~l~ 470 (512)
++..
T Consensus 274 ~~~~ 277 (392)
T PRK10473 274 TSQV 277 (392)
T ss_pred HHHH
Confidence 5544
No 22
>PRK12382 putative transporter; Provisional
Probab=99.42 E-value=2e-10 Score=119.35 Aligned_cols=278 Identities=13% Similarity=0.039 Sum_probs=165.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
.++.+..++.+.+++.++..+..-.+|+++..-++ |..++++...+..++..+++|+.|.++||++|||++..+.+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACG 92 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHH
Confidence 45678889999999999998888888988877777 99999999999999999999999999999999999998886543
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+. ......... ... ........+++.-++.|.......++... |++...+++ +..++++.++.....
T Consensus 93 ~~---~~~~~~~~~-~~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-----~~~~~~~~~---~r~~a~~~~~~~~~~ 159 (392)
T PRK12382 93 LA---GLAYLLAAI-LPV-SAPFKFALLVVGRLILGFGESQLLTGALT-----WGLGLVGPK---HSGKVMSWNGMAMYG 159 (392)
T ss_pred HH---HHHHHhhhc-ccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhhCCcc---ccchhhhHHHHHHHH
Confidence 32 111100000 000 00000122333344555555544443322 222344443 688999999888888
Q ss_pred HHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhH
Q 010361 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
+.++||.++|.+....+.... .. ......++......+. ++ .++ + + +.+ +
T Consensus 160 g~~~g~~~~~~l~~~~g~~~~----~~---~~~~~~~~~~~~~~~~--~~---~~~-~--------~---~~~---~--- 209 (392)
T PRK12382 160 ALAAGAPLGLLLHSHFGFAAL----AL---TTMVLPLLAWAFNGTV--RK---VPA-H--------A---GER---P--- 209 (392)
T ss_pred HHHHHHHHHHHHHhccChHHH----HH---HHHHHHHHHHHHHHhc--cC---CCC-C--------c---ccC---c---
Confidence 999999999999887653221 11 1111111111111211 11 000 0 0 000 1
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
+.++.++..++.. +...+..+.. .........|..+.|.++ .|......+++++.|.++.+++.+|+|..|
T Consensus 210 -~~~~~~~~~~~~~-----~~~~l~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 280 (392)
T PRK12382 210 -SLWSVVGLIWKPG-----LGLALQGVGF-AVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVK 280 (392)
T ss_pred -hHHHHHHHHHHhH-----HHHHHHHHHH-hHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 1122233333211 1111111111 122334456766677664 456667778888999999999999999888
Q ss_pred HHHHHHHHHHH
Q 010361 464 AGAAGLIFQAS 474 (512)
Q Consensus 464 agl~~l~~Q~~ 474 (512)
....+...+.+
T Consensus 281 ~~~~~~~~~~~ 291 (392)
T PRK12382 281 VAIVSLLVETV 291 (392)
T ss_pred ehHHHHHHHHH
Confidence 77666654444
No 23
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.41 E-value=2.9e-10 Score=116.86 Aligned_cols=269 Identities=15% Similarity=0.088 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010361 159 GNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHT 238 (512)
Q Consensus 159 S~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~ 238 (512)
..++..++...+|.+..+..-|...++....+..+...+.+++.|.++||++||+++....++..+. ..+..+
T Consensus 3 ~~~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~----~~~~~~--- 75 (377)
T PRK11102 3 MPLAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALA----AVACAL--- 75 (377)
T ss_pred cchHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHH----HHHHHH---
Confidence 3466777888888888765438889999988899999999999999999999999998887654332 111111
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhh
Q 010361 239 VIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK 318 (512)
Q Consensus 239 ~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~ 318 (512)
.. + .+.+++..++.|.......+.....+ .| +.++ ++..++++.......++.++||.++|.+...
T Consensus 76 ~~----~--~~~~~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 141 (377)
T PRK11102 76 AQ----T--IDQLIYMRFLHGLAAAAASVVINALM-RD----MFPK---EEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW 141 (377)
T ss_pred Hc----c--HHHHHHHHHHHHHHHHHHHHHHHHHH-HH----hcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1 12233334444554444444433322 23 3443 3788999999999999999999999999886
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcc
Q 010361 319 YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV 398 (512)
Q Consensus 319 ~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpv 398 (512)
.+......+... ..+...+. ....+ ++. +++ + ++++. ..++..+.++..+++|.
T Consensus 142 ~~~~~~~~~~~~---~~~~~~~~---~~~~~--~~~--~~~-~--------~~~~~-------~~~~~~~~~~~~~~~~~ 195 (377)
T PRK11102 142 FSWHAIFWVLAL---AAILAAAL---VFFFI--PET--LPK-E--------RRQPF-------HLRTTIRNFASLFRHKR 195 (377)
T ss_pred cChHHHHHHHHH---HHHHHHHH---HHHhC--Ccc--Ccc-c--------ccCCC-------ChHHHHHHHHHHHcChH
Confidence 654332222111 11111111 11111 111 000 0 00000 01122345566777776
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHH
Q 010361 399 LPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS 474 (512)
Q Consensus 399 l~asla~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~ 474 (512)
+...+....+.+.....+......|.. ..|+++...|.+.+..+++++++.++.+++.+|+|..|....+...+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~ 272 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFI 272 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 554333322322211112222233334 5799999999999999999999999999999999998877666654433
No 24
>PRK11043 putative transporter; Provisional
Probab=99.41 E-value=1.2e-09 Score=114.03 Aligned_cols=274 Identities=14% Similarity=-0.002 Sum_probs=164.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSA--IALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~--~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
++.+.....++.++.-.+..-.|.+ +....+ |...++....+..++..+.+++.|.++||++||+++..+.++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~- 83 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFAL- 83 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHH-
Confidence 4455556666777777777777766 344455 888999999999999999999999999999999999887654322
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
...+..+ . .+ .+.+++..++.|.......+..+ ++-.|| .++ ++..++++....+..++.
T Consensus 84 ---~~~~~~~---~----~~--~~~l~~~~~l~G~~~~~~~~~~~-~~~~~~----~~~---~~~~~~~~~~~~~~~~~~ 143 (401)
T PRK11043 84 ---GSLGMLW---V----ES--AAQLLVLRFVQAVGVCSAAVIWQ-ALVIDR----YPA---QKANRVFATIMPLVALSP 143 (401)
T ss_pred ---HHHHHHH---h----cC--HHHHHHHHHHHHhhhHHHHHHHH-HHHHHh----cCc---HHHHHHHHHHHHHHHHHH
Confidence 1111111 1 11 12233333333433223232222 222343 333 257778888888888899
Q ss_pred HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHH
Q 010361 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (512)
Q Consensus 306 ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (512)
.+||.++|.+....+.......... ..+...+ ....+ .+ +++++ +. ++
T Consensus 144 ~~g~~i~~~l~~~~g~~~~~~~~~~---~~~~~~~----~~~~~-~~----~~~~~------------~~--------~~ 191 (401)
T PRK11043 144 ALAPLLGAWLLNHFGWQAIFATLFA---ITLLLIL----PTLRL-KP----SKKAR------------KQ--------SQ 191 (401)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHH---HHHHHHH----HHHHc-CC----CCCcc------------cc--------ch
Confidence 9999999999887664432222111 1111111 11111 11 00000 00 01
Q ss_pred HHHhHhhhhcCcchhHHHHH-HHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhH
Q 010361 386 IKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (512)
Q Consensus 386 i~eG~~~y~~qpvl~asla~-alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ra 464 (512)
.+++++..+++|.++..+.. ....... ..+....+.|+++.|+++..+|+.....+++.++|.++.+++.+|+|..+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~ 270 (401)
T PRK11043 192 DALTFKQLLKSKTYLGNVLIFAACSAAF-FAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQL 270 (401)
T ss_pred HHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 13456677778765543222 2211111 223344566666789999999999988899999999999999999998887
Q ss_pred HHHHHHHHHHHH
Q 010361 465 GAAGLIFQASLL 476 (512)
Q Consensus 465 gl~~l~~Q~~~L 476 (512)
..+......++.
T Consensus 271 ~~~~~~~~~~~~ 282 (401)
T PRK11043 271 LPWLLVLFAVSV 282 (401)
T ss_pred HHHHHHHHHHHH
Confidence 655555444443
No 25
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.40 E-value=6.9e-11 Score=119.50 Aligned_cols=279 Identities=13% Similarity=-0.018 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHH
Q 010361 154 ACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI 233 (512)
Q Consensus 154 ~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li 233 (512)
.+.++.......+.++.|.+.....-|....+.......+..++..++.|.++||++||+++..+.++..+. ..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~~~ 77 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIV----NLFF 77 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHH----HHHH
Confidence 345566667777888888765443338889999999999999999999999999999999998887654332 1111
Q ss_pred HHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhH-HHH
Q 010361 234 IHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA-SLF 312 (512)
Q Consensus 234 ~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP-~lg 312 (512)
.+. . + .+.+++..++.|.......+.....+ .+ ..++ ++..++++.......++.++|| .++
T Consensus 78 ~~~---~----~--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~~g~~~~~~~~~ 140 (379)
T TIGR00881 78 GFS---T----S--LWVMAALWALNGIFQGMGWPPCGRTV-TK----WFSR---SERGTWVSFWNCSHNVGGGLLPPLVL 140 (379)
T ss_pred HHh---h----h--HHHHHHHHHHHHhhccccCCchHHHH-HH----hcCH---hhheeeEeehhccchhHHHHHHHHHH
Confidence 111 1 1 12333344444554444444433322 23 3333 2678889999999999999999 466
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhh
Q 010361 313 GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKE 392 (512)
Q Consensus 313 GlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~ 392 (512)
+.+....+......+... ..+...++ ..... ++..+.++.++ ..++.+++.+.+ .+..++..+.....+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 211 (379)
T TIGR00881 141 FGIAELYSWHWVFIVPGI---IAIIVSLI---CFLLL-RDSPQSCGLPP-AEEMPNEEPDGD-AEKKEEELTKKQIFLQY 211 (379)
T ss_pred HHHHhcCCchhHHHHHHH---HHHHHHHH---Hheee-CCCccccccCc-cccCcccccccc-cccccccccchHHHHHH
Confidence 666554443322221111 11111111 11111 11111000000 000000000000 00001111223456677
Q ss_pred hhcCcchhHHHHHH-HHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 393 YMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 393 y~~qpvl~asla~a-lL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
.+++|.++...... +.++.. ..+...+..|+.+ .|+++.+.|.+.+..++++++|.++.+++.+|.+..|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 283 (379)
T TIGR00881 212 VLLNKVLWYISLGYVFVYVVR-TGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR 283 (379)
T ss_pred HHhcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc
Confidence 88888766543333 333322 3455567778765 6999999999999999999999999999999865443
No 26
>PRK03545 putative arabinose transporter; Provisional
Probab=99.40 E-value=6.8e-10 Score=115.66 Aligned_cols=248 Identities=14% Similarity=0.032 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010361 162 VEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIP 241 (512)
Q Consensus 162 Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~ 241 (512)
++.+....+|.+..+..-|...++.......+...+++++.|.++||++|||++..+.++-.+ ++.+..+ .
T Consensus 24 ~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~----~~~~~~~---~-- 94 (390)
T PRK03545 24 TEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA----SHVLSAL---A-- 94 (390)
T ss_pred HHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH----HHHHHHH---h--
Confidence 333333335665554433889999988888889999999999999999999999998654322 1111111 1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcch
Q 010361 242 TSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEP 321 (512)
Q Consensus 242 ~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~ 321 (512)
.+ .+.+++.-++.|.......+..+..+. | ..++ ++..++++.......++..+||++++.+.+..+.
T Consensus 95 --~~--~~~l~~~r~~~G~~~~~~~~~~~~~i~-~----~~~~---~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw 162 (390)
T PRK03545 95 --WN--FTVLLISRIGIAFAHAIFWSITASLAI-R----VAPA---GKKAQALSLLATGTALAMVLGLPLGRVIGQYLGW 162 (390)
T ss_pred --cc--HHHHHHHHHHHHHHHHHHHHHHHHHHH-H----hCCh---hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcH
Confidence 11 223344444455554444333332222 3 3443 3689999999999999999999999999887775
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhH
Q 010361 322 VTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA 401 (512)
Q Consensus 322 ~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~a 401 (512)
.....+... ..+.... .....+ |+. +++ +++ . .++++.++++|.++.
T Consensus 163 ~~~f~~~~~---~~~l~~~---~~~~~~--~~~---~~~-----------~~~-------~----~~~~~~~~~~~~~~~ 209 (390)
T PRK03545 163 RTTFLAIGG---GALITLL---LLIKLL--PLL---PSE-----------HSG-------S----LKSLPLLFRRPALVS 209 (390)
T ss_pred HHHHHHHHH---HHHHHHH---HHHHhC--CCC---CCC-----------Ccc-------h----HHHHHHHHhCcHHHH
Confidence 543333222 1111111 111111 110 000 000 0 123456778887655
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 402 SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 402 sla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
......+.........+.++.|+.+ .|+++...|.+.+..++++++|+++.+++.+|.|..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 272 (390)
T PRK03545 210 LYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF 272 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Confidence 4333322221111222345667665 6999999999999999999999999999999998543
No 27
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.39 E-value=8e-10 Score=116.24 Aligned_cols=231 Identities=10% Similarity=0.013 Sum_probs=143.6
Q ss_pred HHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHH
Q 010361 176 LLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV 254 (512)
Q Consensus 176 ~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v 254 (512)
..++ |..+++....+..+...+.+|+.|.++||++||++++.+.++..+. ..+ .... . + .+.+++.
T Consensus 48 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~----~~~--~~~~-~----~--~~~l~~~ 114 (394)
T PRK10213 48 QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS----CLL--VSFA-N----S--FSLLLIG 114 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH----HHH--HHHH-C----h--HHHHHHH
Confidence 4456 8888888888888999999999999999999999999998775432 111 1111 1 1 2334554
Q ss_pred HHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHH
Q 010361 255 LVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMW 334 (512)
Q Consensus 255 ~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~ 334 (512)
-++.|.......+.....+ .|| +++ ++..++++.....-.++.++||.+++.+...++......+... .
T Consensus 115 r~l~G~~~g~~~~~~~~~i-~~~----~~~---~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~---l 183 (394)
T PRK10213 115 RACLGLALGGFWAMSASLT-MRL----VPP---RTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAV---M 183 (394)
T ss_pred HHHHHHhhHHHHHHHHHHH-HHH----cCH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH---H
Confidence 4556666555555444333 344 343 3799999999999999999999999999987775443332221 1
Q ss_pred HHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhh
Q 010361 335 SLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVL 414 (512)
Q Consensus 335 s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll 414 (512)
.+ +...+....+ |+. +++ + +.. .+.++..+++|.++..+...++.+....
T Consensus 184 ~~---~~~l~~~~~~--p~~--~~~------------~-~~~----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 233 (394)
T PRK10213 184 GV---LCIFWIIKSL--PSL--PGE------------P-SHQ----------KQNTFRLLQRPGVMAGMIAIFMSFAGQF 233 (394)
T ss_pred HH---HHHHHHHHHC--CCC--Ccc------------c-ccc----------hhHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 11 1111121211 211 000 0 000 1122345677766554333222222111
Q ss_pred hhhHH-HHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 415 TPGSL-MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 415 ~~~~l-~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
.+... .+.|.++.|+++..+|.+....++++++|.++.+++.+|.+
T Consensus 234 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~ 280 (394)
T PRK10213 234 AFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV 280 (394)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 22222 34565668999999999999999999999999999999954
No 28
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=3e-10 Score=116.03 Aligned_cols=268 Identities=12% Similarity=0.018 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHH-HHHHHHHHHHHHH
Q 010361 153 YACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYIC-LNTVQAAAQLLSA 230 (512)
Q Consensus 153 ~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~-~dlvq~~~v~ls~ 230 (512)
....++..++..++...+|+++....+ |...++....+..+..++.+|+.|.++||++|||.++. +.+... +.+
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~----~~~ 78 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAA----LAC 78 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH----HHH
Confidence 456788899999999999999887777 99999999888889999999999999999998887554 433211 111
Q ss_pred HHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHH
Q 010361 231 AMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 310 (512)
Q Consensus 231 ~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~ 310 (512)
.+ .. .. .+ .+.+++..++.+.......+..+. +-++| .+++ .......++.++....++.++||.
T Consensus 79 ~~--~~--~~---~~--~~~l~~~~~~~g~~~~~~~p~~~~-~~~~~----~~~~-~~~~~~~~~~~~~~~~~g~~ig~~ 143 (375)
T TIGR00899 79 LL--FA--WN---RN--YFLLLVLGVLLSSFASTANPQLFA-LAREH----ADRT-GREAVMFSSVMRAQISLAWVIGPP 143 (375)
T ss_pred HH--HH--hc---ch--HHHHHHHHHHHHhhhhhhHHHHHH-HHHHH----hhhc-chhhHHHHHHHHHHHhHHHHHhhh
Confidence 11 11 11 11 122233333344443333333322 22333 2221 111222377777778889999999
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhH
Q 010361 311 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGW 390 (512)
Q Consensus 311 lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~ 390 (512)
++|.+....+......+... ..+.... ..... .|+.+ ++.+ +.+.+ .+ +
T Consensus 144 ~~~~l~~~~~~~~~f~~~~~---~~~~~~~----~~~~~-~~~~~--~~~~----------~~~~~-------~~----~ 192 (375)
T TIGR00899 144 LAFWLALGFGFTVMFLTAAL---AFVLCGV----LVWLF-LPSYP--RGAP----------GALTR-------LE----V 192 (375)
T ss_pred HHHHHHHhcccHHHHHHHHH---HHHHHHH----HHHHh-CCCcc--cCcc----------cccCc-------ch----h
Confidence 99999887665433222221 1111111 11111 12111 1000 00000 01 1
Q ss_pred hhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHH
Q 010361 391 KEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (512)
Q Consensus 391 ~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l 469 (512)
+..+++|.++..+...++.+.....+...+..|+. +.|.++.+.|.+.+...+.++.+.++.+++.+|+|..+...++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 193 RGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred hhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHH
Confidence 22345665554433332222211123334556665 57999999999999888888899999999999999888765544
Q ss_pred H
Q 010361 470 I 470 (512)
Q Consensus 470 ~ 470 (512)
.
T Consensus 273 ~ 273 (375)
T TIGR00899 273 L 273 (375)
T ss_pred H
Confidence 3
No 29
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.39 E-value=1.7e-10 Score=120.08 Aligned_cols=272 Identities=14% Similarity=0.070 Sum_probs=163.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~l 228 (512)
|...|.+.+ .+-.+..--+|+++.+...|...++....+..++.++.+|+.|.++||++|++... ..+.... .+
T Consensus 9 ~~~~~~~~~---~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~--~~~~~~~-~~ 82 (382)
T PRK11128 9 LALSYFGYF---FAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPAL--RLLALLT-LL 82 (382)
T ss_pred HHHHHHHHH---HHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHH--HHHHHHH-HH
Confidence 344444444 44567777778888776559999999999999999999999999999999953211 1111010 00
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHh
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilG 308 (512)
+.+ .+. ... ++ .+.+++...+.+.......++.+..++ +| .+ +..+++++.+....++..+|
T Consensus 83 -~~~-~~~-~~~---~~--~~~l~i~~~l~g~~~~~~~~~~~a~~~-~~-----~~----~~~~a~~~~~~~~~lg~~ig 144 (382)
T PRK11128 83 -FAV-AFW-FGA---HS--FWLLFVAIGLFNLFFSPLVPLTDALAN-TW-----QK----QIGLDYGKVRLWGSIAFVIG 144 (382)
T ss_pred -HHH-HHH-Hhc---cc--HHHHHHHHHHHHHHHcccccHHHHHHH-HH-----Hh----hccCCcchHHHHHHHHHHHH
Confidence 011 111 111 11 233344334445544444444333332 44 11 45677888888888999999
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHH
Q 010361 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKL 388 (512)
Q Consensus 309 P~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~e 388 (512)
|+++|.+...++......+.. ......++ +... .++.+ +++ + ++ ++ .++..+
T Consensus 145 p~lgg~l~~~~g~~~~f~~~~----~~~~~~~~---~~~~--~~~~~-~~~-~-------~~--~~--------~~~~~~ 196 (382)
T PRK11128 145 SALTGKLVSWFGEQAILWILT----AGVASMLL---GQLL--RPTIM-PQG-E-------SR--QQ--------ESAGWP 196 (382)
T ss_pred HHHHHHHHHHcChhHHHHHHH----HHHHHHHH---HHHc--cCCCC-Ccc-c-------cc--cc--------cccccc
Confidence 999999999877654332221 11111111 1111 11110 000 0 00 00 001234
Q ss_pred hHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHH
Q 010361 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 468 (512)
Q Consensus 389 G~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~ 468 (512)
+++..+|+|.++..+...++.......+.+.++.|+.+.|+++..+|.+.+.+.++.+.+.++.+++.+|+|..+....+
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~ 276 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLS 276 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 67788899987765444333322213345567788888999999999999999999999999999999999998876655
Q ss_pred HHHH
Q 010361 469 LIFQ 472 (512)
Q Consensus 469 l~~Q 472 (512)
....
T Consensus 277 ~~~~ 280 (382)
T PRK11128 277 AICG 280 (382)
T ss_pred HHHH
Confidence 5433
No 30
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.38 E-value=3.6e-10 Score=117.74 Aligned_cols=272 Identities=13% Similarity=0.012 Sum_probs=169.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v 226 (512)
+.+..+..+.++-..++.+..-.+|.+..+..-|.-..+....+..+..++..|+.|.+.||++||+++..+.++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~- 81 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG- 81 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH-
Confidence 4567788888888888888888888887665448788888888899999999999999999999999999887654332
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHH
Q 010361 227 LLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (512)
Q Consensus 227 ~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ki 306 (512)
. .+ ... . .+ .+.+++.-++.|.......+.....++ + +.++ ++..++++.......++..
T Consensus 82 --~-~l--~~~-~----~~--~~~l~~~r~l~G~~~~~~~~~~~~~~~-~----~~~~---~~~~~~~~~~~~~~~~g~~ 141 (382)
T PRK10091 82 --N-AM--FTL-S----SS--YLMLAIGRLVSGFPHGAFFGVGAIVLS-K----IIKP---GKVTAAVAGMVSGMTVANL 141 (382)
T ss_pred --H-HH--HHH-h----Cc--HHHHHHHHHHHHhhhHHHHHHHHHHHH-H----hCCh---HHhhHHHHHHHHHHHHHHH
Confidence 1 11 111 1 11 233444445556555544444433333 3 3443 2677888988888889999
Q ss_pred HhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHH
Q 010361 307 AGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAI 386 (512)
Q Consensus 307 lGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 386 (512)
+||.++|.+....+......+.... .....+ .....+ |+.+ ++ + +.+ .
T Consensus 142 ~g~~l~~~l~~~~gwr~~f~~~~~~---~~~~~~---~~~~~l--p~~~--~~-~----------~~~-----------~ 189 (382)
T PRK10091 142 LGIPLGTYLSQEFSWRYTFLLIAVF---NIAVLA---SIYFWV--PDIR--DE-A----------KGG-----------L 189 (382)
T ss_pred HhccHHHHHhhhccHHHHHHHHHHH---HHHHHH---HHHHhC--CCCC--cc-c----------ccC-----------H
Confidence 9999999998866644332222211 111111 111111 2110 00 0 000 1
Q ss_pred HHhHhhhhcCcchhHHHHHH-HHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhH
Q 010361 387 KLGWKEYMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (512)
Q Consensus 387 ~eG~~~y~~qpvl~asla~a-lL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ra 464 (512)
++.++.. ++|.....+... +.+... ....+....|..+ .|+++...|.+.+..++++++|.++.+++.+|+|..+.
T Consensus 190 ~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~ 267 (382)
T PRK10091 190 REQFHFL-RSPAPWLIFAATMFGNAGV-FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI 267 (382)
T ss_pred HHHHHHh-cChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH
Confidence 2233433 444333222222 222211 1122334456654 79999999999999999999999999999999998887
Q ss_pred HHHHHHHHH
Q 010361 465 GAAGLIFQA 473 (512)
Q Consensus 465 gl~~l~~Q~ 473 (512)
..++...+.
T Consensus 268 ~~~~~~~~~ 276 (382)
T PRK10091 268 AAVTDFIIV 276 (382)
T ss_pred HHHHHHHHH
Confidence 666554433
No 31
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=3.5e-10 Score=114.20 Aligned_cols=273 Identities=17% Similarity=0.048 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010361 161 LVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVI 240 (512)
Q Consensus 161 ~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~ 240 (512)
+...+..++.|.+.....-|...++....+..+..++.+++.|.++||++||+++..+.++..+. ..+..+. .
T Consensus 8 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~~~~~~---~ 80 (399)
T TIGR00893 8 LDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF----TGLQAFA---G 80 (399)
T ss_pred HHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH----HHHHHHH---c
Confidence 33466677788755444338888999999999999999999999999999999988877654321 1111111 1
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q 010361 241 PTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 241 ~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s 320 (512)
+ .+.+++..++.|.......+.....+ .| ..++ ++..++++..+....++.++||.++|.+....+
T Consensus 81 ----~--~~~~~~~~~l~g~~~~~~~~~~~~~~-~~----~~~~---~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 146 (399)
T TIGR00893 81 ----A--YVSLYILRVLLGAAEAPFFPGIILIV-AS----WFPA---SERATAVSIFNSAQGLGGIIGGPLVGWILIHFS 146 (399)
T ss_pred ----C--HHHHHHHHHHHHHHHHhhhhHHHHHH-HH----hCCH---HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC
Confidence 1 22334444455555555444443322 23 3443 378999999999999999999999999887766
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCC-CCCCCCCCcchhHHhHHHHHHhHhhhhcCcch
Q 010361 321 PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTS-NEGPVPDADNIVDVGIEAIKLGWKEYMQQPVL 399 (512)
Q Consensus 321 ~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl 399 (512)
......+... ..+...++ ..... ++..++++...++.++. .++...+.++ +...++..+.++..+++|.+
T Consensus 147 ~~~~~~~~~~---~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 217 (399)
T TIGR00893 147 WQWAFIIEGV---LGIIWGVL---WLKFI-PDPPQKAKWLTEEEKYIVVGGLLAEQQG--KGPSTPKKYQIKELLKDRRV 217 (399)
T ss_pred chHHHHHHHH---HHHHHHHH---hhhee-cCCCCccccCCHHHHhhcchhhcccccc--ccccCCCccchHHHhcCHHH
Confidence 4332222111 11111111 11111 11011000000000000 0000000000 00000112345556677765
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 400 PASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 400 ~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
+..+...+++......+...++.|+++ .|.++...|.+.+..++++++|.++.+++.+|+|..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 218 WGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 554433333322213344566777765 7999999999999999999999999999999998775
No 32
>PRK10054 putative transporter; Provisional
Probab=99.33 E-value=7.9e-10 Score=116.35 Aligned_cols=272 Identities=12% Similarity=-0.016 Sum_probs=167.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
.+++++.|.++.++..+|..+...-+|.++....+ |...++....+..+..+++.|++|.+.||++||++++...+...
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHH
Confidence 45679999999999999999999999999988888 99999999998899999999999999999999999888776543
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ ++.+..+. + + .+.+++...+.++....+....+ .|+....++ ++..++++.......+
T Consensus 85 ~----~~~~~~~~---~----~--~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~g~~~~~~~l 143 (395)
T PRK10054 85 S----GFIAIPLV---N----N--VTLVVLFFALINCAYSVFSTVLK-----AWFADNLSS---TSKTKIFSLNYTMLNI 143 (395)
T ss_pred H----HHHHHHHH---h----H--HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHhcCH---hHHHHHHHHHHHHHHH
Confidence 2 11111111 1 1 11222222233433333322222 344445554 3788999999999999
Q ss_pred HHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhH
Q 010361 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
...+||.++|.+.. .+......+.....+. ..++..+.+.+ .+++++ +++ ++.+
T Consensus 144 g~~igp~l~~~l~~-~g~~~~f~~~~~~~~i---~~i~~~~~~~~--------~~~~~~---------~~~-----~~~~ 197 (395)
T PRK10054 144 GWTVGPPLGTLLVM-QSINLPFWLAAICSAF---PLVFIQIWVQR--------SEKAIA---------TET-----GSVW 197 (395)
T ss_pred HHHHHHHHHHHHHH-hccCcHHHHHHHHHHH---HHHHHHHHHhc--------cccccc---------cch-----hhhh
Confidence 99999999999886 4443322222111111 11111111111 110000 000 0001
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHH-HHHhhhhhhHHHHHHHH---HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGSLMTAFLT---QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL-~~tvll~~~~l~v~yl~---~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
..+..+++|.++......++ .+.. ..+.+....|+. +.+.++..+|.+.+..++..+...+..+++.+|.
T Consensus 198 -----~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 271 (395)
T PRK10054 198 -----SPSVLLQDKALLWFTCSGFLASFVS-GAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA 271 (395)
T ss_pred -----hhhhhccCceehHHHHHHHHHHHHH-HHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC
Confidence 12456777766554333222 2211 112223344443 4577888999999999888888888888888888
Q ss_pred ChhhHHHHHH
Q 010361 460 GILKAGAAGL 469 (512)
Q Consensus 460 G~~ragl~~l 469 (512)
+..+...++.
T Consensus 272 ~~~~~l~~~~ 281 (395)
T PRK10054 272 NIRPLMTAGT 281 (395)
T ss_pred CchhHHHHHH
Confidence 8776554444
No 33
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.33 E-value=1.3e-09 Score=111.19 Aligned_cols=287 Identities=10% Similarity=-0.040 Sum_probs=166.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
|.++..|.+.+++..+..++....|.++....+ |...++.......+..++.+++.|.+.||++||+++..+.++..+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 1 RNLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIP 80 (366)
T ss_pred CchHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 457788899998888888888888876767777 9999999999999999999999999999999999988876554322
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
..+..+. . .+ .+.+++.-++.|.......... ..+ .|| .++ ++..++++.......++.
T Consensus 81 ----~~~~~~~---~---~~--~~~~~~~~~~~g~~~~~~~~~~-~~~-~~~----~~~---~~r~~~~~~~~~~~~~g~ 139 (366)
T TIGR00886 81 ----CLWAGLA---V---QS--YSVLLLLRLFIGIAGGSFASCM-PWI-SFF----FPK---KIQGTALGLAAGWGNMGG 139 (366)
T ss_pred ----HHHHHHH---h---hh--HHHHHHHHHHHHHhchhhHhHH-HHH-HHh----cCH---hhhhHHHHHHHHHhHHHH
Confidence 1111111 1 01 1222333333444333333222 222 243 333 367888888887778888
Q ss_pred HHhHHHHHHHHhhc----------chhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCC
Q 010361 306 IAGASLFGILLSKY----------EPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDA 375 (512)
Q Consensus 306 ilGP~lgGlL~s~~----------s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~ 375 (512)
.+||.+++.+...+ +......+ ..........++. +. . + ++.++++++ +++.+. +.+.
T Consensus 140 ~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~-~~-~-~-~~~~~~~~~-~~~~~~-----~~~~ 207 (366)
T TIGR00886 140 GVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI--VPAGILLLPALLI-FF-V-G-ADTPPGKPA-TGKLSF-----KGAR 207 (366)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccchhHH--HHHHHHHHHHHHH-HH-h-c-ccCCccccc-chhccc-----cccc
Confidence 88888887776532 11111101 0011111111110 11 1 1 111110000 000000 0000
Q ss_pred cchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 010361 376 DNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAY 454 (512)
Q Consensus 376 ~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~ 454 (512)
....+ +. .+.++..+++|.++.......+++.....+...++.|+++ .|+++.+.|.+.+...+++++|.++.++
T Consensus 208 ~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 283 (366)
T TIGR00886 208 WSVGT---GA-LGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGA 283 (366)
T ss_pred ccccc---hh-HHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccch
Confidence 00000 11 1133445566655544333333332223345566778875 6999999999999999999999999999
Q ss_pred HHHhhChhhHHHHHHH
Q 010361 455 LVRRLGILKAGAAGLI 470 (512)
Q Consensus 455 L~rRlG~~ragl~~l~ 470 (512)
+.+|+|..|....+..
T Consensus 284 l~~r~g~~~~~~~~~~ 299 (366)
T TIGR00886 284 ISDRLGGARKLLMSFL 299 (366)
T ss_pred HHHhhccchhHHHHHH
Confidence 9999999877666554
No 34
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.32 E-value=9e-10 Score=116.02 Aligned_cols=288 Identities=11% Similarity=0.056 Sum_probs=158.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++++++.++...++-.++-.+..--+|.++..-.+ |...+++...+..+...+.+|+.|.+.||++|||++..+..+-.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 8 KNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 67789999999999999888888888888888777 99999999999999999999999999999999999877654322
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+. ......+.. . .......+...++.+.....+.......++ +|.... +++....-+..+....+
T Consensus 88 ~~---~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~g~~~g~~~~~~~~ 152 (420)
T PRK09528 88 VL---FGPFFIYVF-A-----PLLQYNILLGAIVGGIYLGFGFLAGAGAIE-AYIERV-----SRRSGFEYGRARMWGSL 152 (420)
T ss_pred HH---HHHHHHHHH-H-----HHHHHHHHHHHHHHHHHhhhhhccchhhhh-hHHHHH-----HhhccccchhhHHhhhH
Confidence 11 111101100 0 000000011111111111111111112222 332111 01222234566777788
Q ss_pred HHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhH
Q 010361 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
+..+||.++|.+... +......+..+ ..+.... ....+.++ .+++++ .+ +++.+.+ .+.
T Consensus 153 g~~i~~~~~g~l~~~-~~~~~f~~~~~---~~~~~~~----~~~~~~~~-~~~~~~----~~--~~~~~~~----~~~-- 211 (420)
T PRK09528 153 GWALCAFIAGILFNI-NPQINFWLGSG---SALILLV----LLFFAKPD-APSTAK----VA--NALGANA----SAV-- 211 (420)
T ss_pred HHHHHHHHHHHHHhc-CchHhHHHHHH---HHHHHHH----HHhccccc-ccchhh----hc--cchhccc----ccc--
Confidence 999999999999763 33221111111 1111111 11111111 110000 00 0000000 001
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH----hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ----RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~----lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
+ .+.++..+|||.++..+...+........+...++.|+.+ .+.+...+|.+.++..++..+|.++.+++.+|+
T Consensus 212 -~-~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 289 (420)
T PRK09528 212 -S-LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI 289 (420)
T ss_pred -c-HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1233456677765543322222111111233345566543 367778999999999999999999999999999
Q ss_pred ChhhHHHHHHH
Q 010361 460 GILKAGAAGLI 470 (512)
Q Consensus 460 G~~ragl~~l~ 470 (512)
|..+...++..
T Consensus 290 g~~~~~~~~~~ 300 (420)
T PRK09528 290 GAKNALLLAGT 300 (420)
T ss_pred CcchhhHHHHH
Confidence 98887554433
No 35
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.32 E-value=2.2e-09 Score=116.42 Aligned_cols=294 Identities=14% Similarity=0.018 Sum_probs=174.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~l 228 (512)
+..+..+.++..+...+...|+|-+..++..+.-.++....+..+...++.++.|.+.||++||++++.+.++..+.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~--- 84 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA--- 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH---
Confidence 45578899999999999999999998877667778888888888888999999999999999999999988654332
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHh
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilG 308 (512)
+ .+ ... . .+ .+.+++.-++.|+......+.....+.++ ..++ ++..++++.+.....++..+|
T Consensus 85 ~-~~--~~~-a----~~--~~~li~~r~l~G~g~~~~~~~~~~~l~~~----~~~~---~~r~~~~g~~~~~~~~g~~~g 147 (495)
T PRK14995 85 S-LA--AAF-S----PT--ASWLIATRALLAIGAAMIVPATLAGIRAT----FTEE---KQRNMALGVWAAVGSGGAAFG 147 (495)
T ss_pred H-HH--HHH-c----CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCH---HHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 111 1 11 12233333445555555444444334332 1222 478999999999999999999
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCC---------------CCCCCC
Q 010361 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTS---------------NEGPVP 373 (512)
Q Consensus 309 P~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~---------------~~~~~~ 373 (512)
|.++|.+...++......++..+.+. ... +..+. .|+.+.+++ ++.+..+ .+..+.
T Consensus 148 p~lgg~l~~~~gwr~~f~i~~~~~~~---~~~----l~~~~-l~~~~~~~~-~~~d~~g~~~~~~~~~~l~~~~~~~~~~ 218 (495)
T PRK14995 148 PLVGGILLEHFYWGSVFLINVPIVLV---VMG----LTARY-VPRQAGRRD-QPLNLGHALMLIVAILLLVYSAKTALKG 218 (495)
T ss_pred HHHHHHhhccCChHHHHHHHHHHHHH---HHH----HHHHh-CCCCCCCCC-CCCChHhHHHHHHHHHHHHHHHHhcccc
Confidence 99999999877654433322211111 111 11111 121110000 0000000 000000
Q ss_pred CCcch--hHH-----------hHHHHHH-----hHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchh
Q 010361 374 DADNI--VDV-----------GIEAIKL-----GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSII 434 (512)
Q Consensus 374 ~~~~~--~~~-----------~~~~i~e-----G~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~i 434 (512)
..... ... .+.|.+. .+ ..+++|.+.......+..+....++...++.|++. +|+++.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~a 297 (495)
T PRK14995 219 FLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDM-RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEA 297 (495)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCH-HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 00000 000 0001000 01 23556665554444333322212333455667775 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHH
Q 010361 435 GGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ 472 (512)
Q Consensus 435 G~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q 472 (512)
|+.....+++..+++.+.+++.+|+|..+....+....
T Consensus 298 g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~ 335 (495)
T PRK14995 298 GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALS 335 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 99999999999999999999999999877665555433
No 36
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.31 E-value=1.8e-09 Score=114.76 Aligned_cols=279 Identities=12% Similarity=0.013 Sum_probs=157.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHH
Q 010361 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (512)
Q Consensus 148 ~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ 227 (512)
-+..+.++.++..+........+|.+..+..-|...++.......+...+.+++.|.+.||++||+++..+.++-.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~--- 100 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI--- 100 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH---
Confidence 34445566666655555667788887766433889999999999999999999999999999999998777654222
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 228 ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
..+...+. .+ .+.+++..++.+.......+.....+ .+|. ++ ++..++.+.......++.++
T Consensus 101 ---~~~~~~~~-----~~--~~~l~~~~~l~g~~~g~~~~~~~~~~-~~~~----~~---~~rg~~~~~~~~~~~~g~~~ 162 (434)
T PRK11663 101 ---INILFGFS-----SS--LWAFALLWVLNAFFQGWGWPVCAKLL-TAWY----SR---TERGGWWAIWNTAHNVGGAL 162 (434)
T ss_pred ---HHHHHHHH-----hH--HHHHHHHHHHHHHHHHccchHHHHHH-HHhC----CH---HHHHHHHHHHHHHHHHHHHH
Confidence 11111111 11 12223333344544444333333333 2443 33 36888999999999999999
Q ss_pred hHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-ccccccCCCCCCCCCCCCcchhHHhHHHH
Q 010361 308 GASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRA-KCSQSCCRTSNEGPVPDADNIVDVGIEAI 386 (512)
Q Consensus 308 GP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 386 (512)
||.++|.+...++......+... ..+...++ ....++++ ++.. .++....++..++...+.+ +...+.
T Consensus 163 ~~~~~~~l~~~~gw~~~f~~~~i---~~~~~~~~---~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 231 (434)
T PRK11663 163 IPLVVGAIALHYGWRYGMMIAGI---IAIVVGLF---LCWRLRDK-PQAMGLPSVGEWRHDALELAQQQE----GAGLSR 231 (434)
T ss_pred HHHHHHHHHHcccHHHHHHHHHH---HHHHHHHH---HHHHcCCC-HhhcCCCCcccccccccccchhcc----ccCCCh
Confidence 99999999887664433222111 11111111 11111111 1000 0000000000000000000 000012
Q ss_pred HHhHh-hhhcCcchhHHHHHH-HHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 387 KLGWK-EYMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 387 ~eG~~-~y~~qpvl~asla~a-lL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
++-++ +.+++|.+....... +.++.. ..+...++.|++ +.|+++.+.|...+...+++++|.++.+++.+|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 232 KEILTKYVLLNPYIWLLSFSYVLVYVVR-AAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred hhhHHHHHhcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 22232 356777655433222 222221 234455677885 4799999999999999999999999999999998
No 37
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.30 E-value=3.2e-09 Score=110.60 Aligned_cols=277 Identities=13% Similarity=-0.023 Sum_probs=159.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~l 228 (512)
....+...++..+.......+.|.+..+..-|..+++....+..+..++.+++.|.+.||++||+++....++..+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~--- 93 (406)
T PRK11551 17 IGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLF--- 93 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH---
Confidence 44566777777777788888888887664449999999999999999999999999999999999998876543221
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHh
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilG 308 (512)
..+ ..+. .+ .+.+++..++.|.......+.....+ .|| .++ ++..++++.......+..+++
T Consensus 94 -~~~--~~~~-----~~--~~~~~~~~~l~G~~~~~~~~~~~~~~-~~~----~~~---~~r~~~~~~~~~~~~~g~~~~ 155 (406)
T PRK11551 94 -SLA--TAQA-----WD--FPSLLVARLLTGVGLGGALPNLIALT-SEA----VGP---RLRGTAVSLMYCGVPFGGALA 155 (406)
T ss_pred -HHH--HHHh-----cc--HHHHHHHHHHHHhhHHHHHHHHHHHH-HHH----cCH---HHHHHHHHHHHHHHHHHHHHH
Confidence 111 1111 11 12333444445554444443333222 233 333 378899999999999999999
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHH
Q 010361 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKL 388 (512)
Q Consensus 309 P~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~e 388 (512)
|.+++.+....+......+... ..+....+ ....+ ++.++.++++ ...+. .+...+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~l--~~~~~~~~~~---------~~~~~---~~~~~~~~-- 213 (406)
T PRK11551 156 SVIGVLAAGDAAWRHIFYVGGV---GPLLLVPL---LMRWL--PESRAFAQAA---------GAGKQ---RAPVLRAL-- 213 (406)
T ss_pred HHHHHHHccccCHHHHHHHHHH---HHHHHHHH---HHHhC--CCChhHHhcc---------Ccchh---hhhhHHHH--
Confidence 9999888765554332222111 11111111 11111 1111100000 00000 01111111
Q ss_pred hHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHH
Q 010361 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 468 (512)
Q Consensus 389 G~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~ 468 (512)
++.. +.+..+......+..+.....+...++.|+++.|+++...|.+.+...+++++|.++.+++.+|+|..+.....
T Consensus 214 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 291 (406)
T PRK11551 214 -FGEG-RATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLI 291 (406)
T ss_pred -hhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 1111 11111111111111111111223345667778899999999999999999999999999999999988876654
Q ss_pred HH
Q 010361 469 LI 470 (512)
Q Consensus 469 l~ 470 (512)
..
T Consensus 292 ~~ 293 (406)
T PRK11551 292 YA 293 (406)
T ss_pred HH
Confidence 43
No 38
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.28 E-value=2.2e-09 Score=106.93 Aligned_cols=250 Identities=18% Similarity=0.058 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHH
Q 010361 150 YALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLS 229 (512)
Q Consensus 150 ~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls 229 (512)
..+..+.+...++..+.....|.+..+..-+....+.......+..++..|+.|.+.||++||+.+..+.+...+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~---- 77 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALG---- 77 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHH----
Confidence 4577889999999999999999998776558889999999999999999999999999999999988888765432
Q ss_pred HHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhH
Q 010361 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA 309 (512)
Q Consensus 230 ~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP 309 (512)
..+... . . + .+..++..++.|.......+..... ++.+.+++ +..+.++..+....++.++||
T Consensus 78 ~~~~~~--~-~----~--~~~~~~~~~l~g~~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~ 140 (352)
T cd06174 78 SLLLAF--A-S----S--LWLLLVGRFLLGLGGGALYPAAAAL-----IAEWFPPK---ERGRALGLFSAGFGLGALLGP 140 (352)
T ss_pred HHHHHH--h-c----c--HHHHHHHHHHHHcccccccHhHHHH-----HHHhCCcc---chhhhhhHHHHHHHHHHHHHH
Confidence 111111 1 1 1 1223344444555444444444332 22345543 789999999999999999999
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHh
Q 010361 310 SLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLG 389 (512)
Q Consensus 310 ~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG 389 (512)
.+++.+....+......+... ..+...+ ..... .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~------------------------------~--------- 174 (352)
T cd06174 141 LLGGLLAESLGWRWLFLILAI---LGLLLAL----LLLFL------------------------------L--------- 174 (352)
T ss_pred HHHHHHHHHhhHHHHHHHHHH---HHHHHHH----HHHHH------------------------------H---------
Confidence 999999886653322222111 1111111 10000 0
Q ss_pred HhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHh-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh-HHHH
Q 010361 390 WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQR-GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK-AGAA 467 (512)
Q Consensus 390 ~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~l-Gls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r-agl~ 467 (512)
|.++.......++......+...++.|.++. |.++.+.|.+.+..++++++|.++.+++.+|+|..+ ....
T Consensus 175 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 247 (352)
T cd06174 175 -------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLI 247 (352)
T ss_pred -------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 2223222222222222123445566676664 999999999999999999999999999999999888 6555
Q ss_pred HHHHHH
Q 010361 468 GLIFQA 473 (512)
Q Consensus 468 ~l~~Q~ 473 (512)
+.....
T Consensus 248 ~~~~~~ 253 (352)
T cd06174 248 GLLLAA 253 (352)
T ss_pred HHHHHH
Confidence 554333
No 39
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.28 E-value=6.8e-09 Score=108.69 Aligned_cols=270 Identities=13% Similarity=0.018 Sum_probs=157.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhH-HHHHHHHHHHH
Q 010361 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPA-YICLNTVQAAA 225 (512)
Q Consensus 148 ~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~v-mi~~dlvq~~~ 225 (512)
..+.++++.+++.++..+....+|.++...++ |...+|+......+...+++++.|.+.||++|||. ++.+.+.-.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~- 94 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVL- 94 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH-
Confidence 46789999999999999999999999988888 88888888766677778888888888999998875 4555543211
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
.+.+ ... . .+ .+.+++...+++.......+..+ ++-+||. +++ +......|+..+....++.
T Consensus 95 ---~~~~--~~~-~----~~--~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~-~~~~~~~~~~~~~~~~lg~ 156 (393)
T PRK15011 95 ---ACTL--FAW-N----RN--YFVLLFVGVFLSSFGSTANPQMF-ALAREHA----DKT-GREAVMFSSFLRAQVSLAW 156 (393)
T ss_pred ---HHHH--HHH-h----hH--HHHHHHHHHHHHHHHHhhHHHHH-HHHHHHh----hhc-cchHHHHHHHHHHHHHHHH
Confidence 1111 111 1 11 12223333334444444443333 2323432 221 1234566788888889999
Q ss_pred HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHH
Q 010361 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (512)
Q Consensus 306 ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (512)
++||+++|.+...+|.......... ..+...+ .....+ |+.+++++ + + ++. .+.
T Consensus 157 ~~g~~i~~~l~~~~gw~~~f~~~~~---~~~~~~~---~~~~~~--~~~~~~~~-~--------~--~~~-------~~~ 210 (393)
T PRK15011 157 VIGPPLAYALAMGFSFTVMYLSAAV---AFIVCGV---MVWLFL--PSMRKELP-L--------A--TGT-------LEA 210 (393)
T ss_pred HHhhHHHHHHHHhcChHHHHHHHHH---HHHHHHH---HHHhhc--CccCCCCc-c--------c--ccc-------ccc
Confidence 9999999999877765432222111 1111111 111111 21110000 0 0 000 000
Q ss_pred HHHhHhhhhcC-cchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 386 IKLGWKEYMQQ-PVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 386 i~eG~~~y~~q-pvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
. .++ +.....+....+.+.....+...++.|+++ .|+++.++|.+.+...++++++.++.+++.+|+|..|
T Consensus 211 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~ 283 (393)
T PRK15011 211 P-------RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF 283 (393)
T ss_pred c-------ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 0 112 111222222222222212233456667764 7999999999999888889999999999999999888
Q ss_pred HHHHHH
Q 010361 464 AGAAGL 469 (512)
Q Consensus 464 agl~~l 469 (512)
....+.
T Consensus 284 ~~~~~~ 289 (393)
T PRK15011 284 LMRVAA 289 (393)
T ss_pred HHHHHH
Confidence 665543
No 40
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.27 E-value=7.6e-09 Score=109.67 Aligned_cols=263 Identities=13% Similarity=0.044 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHH
Q 010361 153 YACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAM 232 (512)
Q Consensus 153 ~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~l 232 (512)
-...+++.+..-+..-++|-+..+...+.-.++.......+...+..++.|.+.||++||+++....++..+. + .+
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~---~-~~ 97 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLA---C-AA 97 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH---H-HH
Confidence 3344556666677777777654444436666666666667788889999999999999999998887654321 1 11
Q ss_pred HHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHH
Q 010361 233 IIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLF 312 (512)
Q Consensus 233 i~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lg 312 (512)
... . .+ ...+++.-++.|+.+........ ++.+| ..++ ++..++++.+.....++.++||.++
T Consensus 98 --~~~-a----~~--~~~l~~~r~l~Gi~~~~~~~~~~-~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~g~~lg 160 (413)
T PRK15403 98 --TLF-T----TS--MTQFLIARFIQGTSICFIATVGY-VTVQE----AFGQ---TKGIKLMAIITSIVLVAPIIGPLSG 160 (413)
T ss_pred --HHH-c----CC--HHHHHHHHHHHHHHHHHHHHHHH-HHHHH----hcCH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1 11 12334444455555544333332 23234 2333 3688999999999999999999999
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhh
Q 010361 313 GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKE 392 (512)
Q Consensus 313 GlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~ 392 (512)
|.+....+......+... ..+...+ .....+ |+. ++++ + ++. ..++..++++.
T Consensus 161 ~~l~~~~gw~~~f~~~~~---~~~i~~~---~~~~~l--p~~---~~~~--------~-~~~-------~~~~~~~~~~~ 213 (413)
T PRK15403 161 AALMHFVHWKVLFAIIAV---MGLIAFV---GLLLAM--PET---VKRG--------A-VPF-------SAKSVLRDFRN 213 (413)
T ss_pred HHHHHhcCHHHHHHHHHH---HHHHHHH---HHHHhC--CCC---cccc--------C-CCC-------ChHHHHHHHHH
Confidence 999887665433222221 1111111 111111 211 1000 0 000 11234567788
Q ss_pred hhcCcchhHHHHHH-HHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhH
Q 010361 393 YMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (512)
Q Consensus 393 y~~qpvl~asla~a-lL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ra 464 (512)
.++||.++...... +.+... ..+....+.|+++ .|+++..+|+.......++++|+.+..++.+|.+..|.
T Consensus 214 ll~~~~~~~~~l~~~~~~~~~-~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 286 (413)
T PRK15403 214 VFRNRLFLTGAATLSLSYIPM-MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF 286 (413)
T ss_pred HHcCHHHHHHHHHHHHHHHHH-HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH
Confidence 88999777654433 333322 3344455667776 59999999999988888888988888887766554443
No 41
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.26 E-value=5.3e-09 Score=111.14 Aligned_cols=289 Identities=15% Similarity=0.062 Sum_probs=171.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~l 228 (512)
+..+..+.++..++..+...++|.+..+...+...++.......+..++..|+.|.+.||++||++++.+.++..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~--- 80 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG--- 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH---
Confidence 45678899999999999999999998776658888899999999999999999999999999999998887654332
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHh
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilG 308 (512)
+ .+ .. .. .+ .+.+++.-++.|.......+.....+ .| ..++ ++..++++.......++.++|
T Consensus 81 ~-~~--~~--~~---~~--~~~l~~~~~~~G~~~~~~~~~~~~~i-~~----~~~~---~~r~~~~~~~~~~~~~g~~~g 142 (485)
T TIGR00711 81 S-LL--CG--VA---PN--LELMIIFRVIQGFGGGPLIPLSFSTL-LN----IYPP---EKRGRAMAIWGLTVLVAPALG 142 (485)
T ss_pred H-HH--Hh--Cc---CC--HHHHHHHHHHHHhhhhhHHHHHHHHH-HH----HCCH---HHHHHHHHHHHHHHHHHhhhh
Confidence 1 11 11 11 11 12233334445554444444433322 23 3333 368889999999999999999
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCC---------------CCCCCCC
Q 010361 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRT---------------SNEGPVP 373 (512)
Q Consensus 309 P~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~---------------~~~~~~~ 373 (512)
|.++|.+....+......+.....+. ..++ ..... ++.+ +++.++.+.. .+++++.
T Consensus 143 ~~~~~~l~~~~~w~~~f~~~~~~~~~---~~~~---~~~~~--~~~~-~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~ 213 (485)
T TIGR00711 143 PTLGGWIIENYHWRWIFLINVPIGII---VVVV---AFFIL--PRDK-PAASENFDFLGLLLLSVGLGSLLYGLSEGPER 213 (485)
T ss_pred hccHhHhccCcCceehhhhhhHHHHH---HHHH---HHHHc--CCcc-ccccCCCcHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 99999998866644333332221111 1111 11111 1111 0000000000 0000000
Q ss_pred CCcchhHHhH---------------HHHH-----HhHhhhhcCcchhHHHHH-HHHHHHhhhhhhHHHHHHHHH-hCCCc
Q 010361 374 DADNIVDVGI---------------EAIK-----LGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ-RGLNP 431 (512)
Q Consensus 374 ~~~~~~~~~~---------------~~i~-----eG~~~y~~qpvl~asla~-alL~~tvll~~~~l~v~yl~~-lGls~ 431 (512)
+..+ ..... ++.+ ..+ ..+++|.+...... .+.++.. ......++.|+++ .|+++
T Consensus 214 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~s~ 290 (485)
T TIGR00711 214 GWFD-SNEILILSITGLVAIIAFVVWELTDDNPLVDL-RLFKYRNFTIGCVYMSLLGLGL-YGSFYLLPLYLQQVLGYTA 290 (485)
T ss_pred CCCC-chHHHHHHHHHHHHHHHHHHHHHcCCCCccCH-HHHcCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCH
Confidence 0000 00000 0000 011 23455544443332 2333322 2233456667775 79999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHH
Q 010361 432 SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (512)
Q Consensus 432 ~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~ 470 (512)
.+.|++....+++.++|..+.+++.+|+|..+...++..
T Consensus 291 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~ 329 (485)
T TIGR00711 291 LQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLI 329 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHH
Confidence 999999999999999999999999999998877655543
No 42
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.25 E-value=3.4e-09 Score=110.24 Aligned_cols=272 Identities=15% Similarity=0.085 Sum_probs=164.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
..+++..++.++++-.++..+....+|.+..+..-|...++.......+...+.+++.|.+.||++||+++...-++-.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999987644989999999999999999999999999999999998877654322
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
...+ ... . .+ .+.+++..++.|.......+..+.++.+ ..++ ++..++.+.....-.+.
T Consensus 84 ----~~~~--~~~-~----~~--~~~l~~~~~l~G~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~g 142 (381)
T PRK03633 84 ----GCAG--LGL-M----VG--FWSWLAWRFVAGIGCAMIWVVVESALMC-----SGTS---RNRGRLLAAYMMVYYLG 142 (381)
T ss_pred ----HHHH--HHH-h----cc--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCH---HHHHHHHHHHHHHHHHH
Confidence 1111 111 1 11 2233444444455444444433333322 1222 25677777777777777
Q ss_pred HHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHH
Q 010361 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
..+||.+++.+......... +... .... ..+ .....+. ++ +++ ++++. .+
T Consensus 143 ~~~g~~~~~~l~~~~~~~~~-~~~~---~~~~-~~~--~~~~~~~--~~---~~~----------~~~~~-----~~--- 192 (381)
T PRK03633 143 TVLGQLLVSKVSTELMSVLP-WVTG---LVLA-AIL--PLLFTRI--LN---QQA----------ENHDS-----TS--- 192 (381)
T ss_pred HHHHHHHHhcccccccchHH-HHHH---HHHH-HHH--HHHHhcc--cC---CCC----------CCCCC-----CC---
Confidence 88888888887654211111 1111 0100 011 0111111 10 000 00000 01
Q ss_pred HHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhH
Q 010361 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (512)
Q Consensus 385 ~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ra 464 (512)
++..+++|-++..+...+.+........+.+..|+++.|.++...|.+.+...+++++|.+..+++.+|+|..+.
T Consensus 193 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 267 (381)
T PRK03633 193 -----IWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLV 267 (381)
T ss_pred -----HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHH
Confidence 112345555443322222221111123345677888889999999999999999999999999999999998876
Q ss_pred HHHHHHHH
Q 010361 465 GAAGLIFQ 472 (512)
Q Consensus 465 gl~~l~~Q 472 (512)
...+....
T Consensus 268 l~~~~~~~ 275 (381)
T PRK03633 268 LRVQVFVV 275 (381)
T ss_pred HHHHHHHH
Confidence 65544433
No 43
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.25 E-value=5e-09 Score=112.17 Aligned_cols=157 Identities=12% Similarity=0.004 Sum_probs=108.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
|.+.+..++++.+++.+...+....+|.+.....-|....+.......+..++.+++.|.++||++||+++..+.++..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 97 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 44677889999999999988888888887654433888888888888889999999999999999999998888765433
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
. +.+..+. .+ .+.+++..++.|.............+. | ..++ ++..++++.......++
T Consensus 98 ~----~~~~~~~-------~~--~~~l~~~~~l~G~~~~~~~~~~~~~~~-~----~~~~---~~r~~~~~~~~~~~~~g 156 (496)
T PRK03893 98 G----TLACGFA-------PG--YWTLFIARLVIGMGMAGEYGSSATYVI-E----SWPK---HLRNKASGFLISGFSIG 156 (496)
T ss_pred H----HHHHHHH-------hH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-H----HcCH---HHHHHHHHHHHHHHHHH
Confidence 2 1111111 11 123344444555544443333332221 3 2333 37888999999988999
Q ss_pred HHHhHHHHHHHHhhcchh
Q 010361 305 EIAGASLFGILLSKYEPV 322 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~ 322 (512)
.++||.+++.+....+..
T Consensus 157 ~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 157 AVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHHHhccCCHH
Confidence 999999999998866543
No 44
>TIGR00895 2A0115 benzoate transport.
Probab=99.22 E-value=3.1e-09 Score=108.44 Aligned_cols=280 Identities=15% Similarity=0.096 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHH
Q 010361 155 CCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMII 234 (512)
Q Consensus 155 g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~ 234 (512)
..+..........+..|.+.....-+....+.......+..++.+++.|.++||++||+++..+.++..+. ..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~----~~~-- 98 (398)
T TIGR00895 25 IMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVF----TLL-- 98 (398)
T ss_pred HHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHH----HHH--
Confidence 33444444445555666665443338888898888889999999999999999999999998887654331 111
Q ss_pred HHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 010361 235 HAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGI 314 (512)
Q Consensus 235 ~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGl 314 (512)
... . .+ .+.+++..++.|.......+.....+ .|| .++ ++..++++.......+..++||.++|.
T Consensus 99 ~~~-~----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~----~~~---~~r~~~~~~~~~~~~~g~~~~~~~~~~ 163 (398)
T TIGR00895 99 CAL-A----TN--VTQLLILRFLAGLGLGGLMPNLNALV-SEY----APK---RFRGTAVGLMFCGYPIGAAVGGFLAGW 163 (398)
T ss_pred HHH-c----cc--hHHHHHHHHHHhcccccchhhHHHHH-HHH----cCH---HhhchhHhhHhhHHHHHHHHHHHHHHH
Confidence 111 1 11 12233334444544444333333222 233 333 368889999999999999999999999
Q ss_pred HHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc-----------cCCCCCCCCCCCCcchhHHhH
Q 010361 315 LLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQS-----------CCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 315 L~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 383 (512)
+....+......+.... .+....+..+.+.+- +.....+++++ ..++ .++..++.+. ..
T Consensus 164 l~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~ 233 (398)
T TIGR00895 164 LIPVFGWRSLFYVGGIA---PLLLLLLLMRFLPES--IDFLVSKRPETVRRIVNAIAPQMQAE-AQSALPEQKA----TQ 233 (398)
T ss_pred HhhcccceeehhhhhhH---HHHHHHHHHHhCCCC--ChHHHhcCHHHHHHHHHHHHHhcccc-cccccccccc----cc
Confidence 98866543322222111 111111111111100 00000000000 0000 0000000000 00
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHHH---HHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLLC---LNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL~---~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
++.++.++..++++..+....+.+.+ ..........++.+..+.|+++...|.+.+...+++++|.++.+++.+|+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (398)
T TIGR00895 234 GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLG 313 (398)
T ss_pred chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 11122333344444433322221111 111011222334444568999999999999999999999999999999999
Q ss_pred hhhHH
Q 010361 461 ILKAG 465 (512)
Q Consensus 461 ~~rag 465 (512)
..+..
T Consensus 314 ~~~~~ 318 (398)
T TIGR00895 314 PRVTA 318 (398)
T ss_pred hHHHH
Confidence 76443
No 45
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.22 E-value=1.6e-08 Score=102.14 Aligned_cols=258 Identities=12% Similarity=0.008 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 010361 166 WNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSS 245 (512)
Q Consensus 166 ~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~ 245 (512)
+..-.|.+..+..-|...++....+..+...+..|+.|.+.||++||+++..+.++..+. . . ...+. . +
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~---~-~--~~~~~-~----~ 90 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG---F-T--FYAIA-D----S 90 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH---H-H--HHHHH-H----H
Confidence 344455554444338899999999999999999999999999999999998887654332 1 1 11111 1 1
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHH
Q 010361 246 MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCL 325 (512)
Q Consensus 246 ~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i 325 (512)
.+.+++..++.|..+..........++ +|. ++ +..++++.......+..++++++.+.+.+..+.....
T Consensus 91 --~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~----~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f 159 (377)
T TIGR00890 91 --LAALYLTYGLASAGVGIAYGIALNTAV-KWF----PD----KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAF 159 (377)
T ss_pred --HHHHHHHHHHHhHHHHHHHHhHHHHHH-HHc----Cc----ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHH
Confidence 122333333444433332222222222 332 22 4567788887777777766665666665544432222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHHHHH
Q 010361 326 KFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAY 405 (512)
Q Consensus 326 ~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~ 405 (512)
.+..+ ..+..... ....+..+ +++++++ +.+.+ +....++..+++|.++.....
T Consensus 160 ~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~----------~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 213 (377)
T TIGR00890 160 IYMGI---IFLLVIVL---GAFLIGYP--PGQLIKT----------NIEVS--------VKDYTVWEMLRTPQFWVLYLS 213 (377)
T ss_pred HHHHH---HHHHHHHH---HHHheecC--chhcccc----------Ccccc--------hhhhhHHHHHcCccHHHHHHH
Confidence 22111 11111111 11111111 0000000 00000 001233445667765443222
Q ss_pred -HHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHH
Q 010361 406 -VLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ 472 (512)
Q Consensus 406 -alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q 472 (512)
.+.++.. .........|.++.|+++...|.+.+..++++++|+++.+++.+|+|..+....+....
T Consensus 214 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 280 (377)
T TIGR00890 214 FFLNAVSG-LLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGIS 280 (377)
T ss_pred HHHHhHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 2222221 12333455676778999999999999999999999999999999999888766555433
No 46
>PRK10504 putative transporter; Provisional
Probab=99.20 E-value=2.5e-08 Score=106.36 Aligned_cols=295 Identities=14% Similarity=0.011 Sum_probs=173.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 146 ~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
++.++.++.+.++..+...+...++|.+..+..-|....+.......+...+..++.|.+.||++||++++.+.++-.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~- 87 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTL- 87 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH-
Confidence 4467889999999999999999999999877544888888888888888899999999999999999998876543221
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
..+...+. .+ .+.+++..++.|.......+.....+ .|| .++ ++..++++..+....++.
T Consensus 88 -----~~~~~~~~-----~~--~~~l~~~~~l~g~~~~~~~~~~~~~~-~~~----~~~---~~~~~~~~~~~~~~~~g~ 147 (471)
T PRK10504 88 -----GSLFCALS-----GT--LNELLLARVLQGVGGAMMVPVGRLTV-MKI----VPR---EQYMAAMTFVTLPGQVGP 147 (471)
T ss_pred -----HHHHHHHh-----CC--HHHHHHHHHHHHhhhHHHHHHHHHHH-HHH----cCH---HHHHHHHHHHHHHHHHHH
Confidence 11111111 11 12233334445554444443333323 233 233 367889999999999999
Q ss_pred HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCC-------------CCCCCCC
Q 010361 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR-------------TSNEGPV 372 (512)
Q Consensus 306 ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~-------------~~~~~~~ 372 (512)
.+||.++|.+....+......++.... .....+ ..... +..+..+...+... ..++++.
T Consensus 148 ~~g~~~~g~l~~~~gw~~~f~~~~~~~---~l~~~~---~~~~~--~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (471)
T PRK10504 148 LLGPALGGLLVEYASWHWIFLINIPVG---IIGAIA---TLMLM--PNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKG 219 (471)
T ss_pred HhhhHHHHHHHhhccHHHHHHHHHHHH---HHHHHH---HHHhC--CCccccCCCCChHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999988766433222221111 111111 11111 11100000000000 0000000
Q ss_pred CCCcc-hhHH------------hHHHHH-----HhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcch
Q 010361 373 PDADN-IVDV------------GIEAIK-----LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSI 433 (512)
Q Consensus 373 ~~~~~-~~~~------------~~~~i~-----eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~ 433 (512)
..-.. .... ..++.+ -.++ ++++|-++..+...+++...........+.|.+. .|.++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 298 (471)
T PRK10504 220 LGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH 298 (471)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 00000 0000 000000 0122 4677766665555444433212333456667764 8999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHH
Q 010361 434 IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (512)
Q Consensus 434 iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~ 470 (512)
.|++....+++++.+..+.+++.+|+|..+....+..
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~ 335 (471)
T PRK10504 299 AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTL 335 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 9999999999999999999999999999888766554
No 47
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.20 E-value=1.1e-08 Score=106.69 Aligned_cols=287 Identities=13% Similarity=0.081 Sum_probs=157.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 146 ~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+|+|+.+-..+++=..+-.++.--+|.++.+..+ +...+++......+..++.+|+.|.+.||++||+.++.+.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV 80 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 4678888888888888888888888889888777 999999999999999999999999999999999999877654322
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
. .+....+. ... ......+....+.+.+..+...+...+. .+|++...++ + ...-+..+....++
T Consensus 81 ~---~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~----~-~~~~g~~~~~~~~g 145 (396)
T TIGR00882 81 L---FAPFFIYV--FGP----LLQSNILVGAIVGGLYLGFVFSAGAGAI-EAYIEKVSRN----S-NFEYGKARMFGCVG 145 (396)
T ss_pred H---HHHHHHHH--hhh----HHHHHHHHHHHHHHHHHHHHhccchhhH-HHHHHHhhhh----c-ccccchhhhhcccH
Confidence 1 11111111 100 0000111111111222222222222222 2332222111 1 12335666777888
Q ss_pred HHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHH
Q 010361 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
..+||.++|.+... +......+... ..+...++ . .... ++.+ ++++ .++ ..+++.+ +...
T Consensus 146 ~~~g~~~~g~l~~~-~~~~~f~~~~~---~~~~~~~~---~-~~~~-~~~~--~~~~--~~~-~~~~~~~-----~~~~- 205 (396)
T TIGR00882 146 WALCASIAGILFSI-DPQIVFWLGSG---FALILMLL---L-MFAK-PKAP--SSAT--VAN-ALGANAS-----AFSL- 205 (396)
T ss_pred HHHHHHHHhhhhcc-CchHHHHHHHH---HHHHHHHH---H-HHhC-CCCc--hhhh--hhc-ccccccC-----CCCH-
Confidence 99999999988763 54332222211 11111111 1 1111 1110 0000 000 0000000 0001
Q ss_pred HHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH----hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ----RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 385 ~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~----lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
+.++..+++|-++..+...+........+...+..|+++ .+.+...+|...+..++.+.++.+..+++.+|+|
T Consensus 206 ---~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g 282 (396)
T TIGR00882 206 ---KLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIG 282 (396)
T ss_pred ---HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 123456677755433222222111101233345666653 2667778999999999999999999999999999
Q ss_pred hhhHHHHHHH
Q 010361 461 ILKAGAAGLI 470 (512)
Q Consensus 461 ~~ragl~~l~ 470 (512)
..+....+..
T Consensus 283 ~~~~l~~~~~ 292 (396)
T TIGR00882 283 AKNALLIAGT 292 (396)
T ss_pred cchhHHHHHH
Confidence 8887655443
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.19 E-value=1.2e-08 Score=106.56 Aligned_cols=278 Identities=13% Similarity=0.062 Sum_probs=162.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHH
Q 010361 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (512)
Q Consensus 148 ~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ 227 (512)
+++.++.+.+.-..+..+..--+|.++.+..-|..+++.......+...+.+|+.|.+.||++|++..+..-.+-.+
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~--- 81 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASA--- 81 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH---
Confidence 45557777777777766666667788866422999999998888999999999999999999986432221111000
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 228 ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
+. .+.... .. ++ .+.+++..++.+.......+..+. +-++| + ++..++-+.++..-.++-++
T Consensus 82 l~-~~~~~~--~~---~~--~~~l~~~~~l~~~~~~~~~p~~~a-l~~~~------~---~~~~~~~g~~~~~~slG~~~ 143 (382)
T TIGR00902 82 IF-AAAFSA--GA---HN--AWLLFIAIGLFALFFSAGMPIGDA-LANTW------Q---KQFGLDYGKVRLIGSAAFII 143 (382)
T ss_pred HH-HHHHHH--hh---hh--HHHHHHHHHHHHHHHccchhHHHH-HHHHH------H---HHcCCCccHHHHHHHHHHHH
Confidence 00 010110 11 11 122233322233322222222221 21222 1 24456678888888899999
Q ss_pred hHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHH
Q 010361 308 GASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK 387 (512)
Q Consensus 308 GP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 387 (512)
||.++|.+.+.+|......... .. ....+ ....+ .+..+ ++++ + + +++. + ..
T Consensus 144 g~~l~g~l~~~~g~~~~f~~~~---~~-~~~~~----~~~~~-~~~~~--~~~~----~---~-~~~~-----~----~~ 195 (382)
T TIGR00902 144 GSALFGGLIGMFDEQNILAILT---AG-LAFML----IGFLI-KPTIP--PKDA----I---P-EDES-----Q----GD 195 (382)
T ss_pred HHHHHHHHHHHcChhHHHHHHH---HH-HHHHH----HHHHc-CCCCC--CCcc----c---c-cccc-----c----cc
Confidence 9999999999887654322211 11 11111 11111 11110 0000 0 0 0000 0 01
Q ss_pred HhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHH
Q 010361 388 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 467 (512)
Q Consensus 388 eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~ 467 (512)
+.++.++|+|.++..+...++.......+.+..+.|+++.|+++.++|.+.++++++++++.++.+++.||+|..+...+
T Consensus 196 ~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 196 SAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLI 275 (382)
T ss_pred hhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHH
Confidence 23456778887666544444433322345567778888899999999999999999999999999999999999887766
Q ss_pred HHHHHHH
Q 010361 468 GLIFQAS 474 (512)
Q Consensus 468 ~l~~Q~~ 474 (512)
+......
T Consensus 276 ~~~~~~~ 282 (382)
T TIGR00902 276 SAIACVG 282 (382)
T ss_pred HHHHHHH
Confidence 6655443
No 49
>PRK10133 L-fucose transporter; Provisional
Probab=99.17 E-value=5.5e-08 Score=104.29 Aligned_cols=283 Identities=11% Similarity=0.029 Sum_probs=164.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ 227 (512)
+..+..-.++-.+.+.+-..-+|.+ ...++ |....++......+...+.+++.|.++||++|||++...-++-.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~-- 104 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG-- 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH--
Confidence 5666666677677777777888887 44555 9999999999999999999999999999999999999887654332
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 228 ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
..+.... ... .+ .+.+++..++.|+......++.+..+. | +.+++ +-....+..+..-.+.-.+
T Consensus 105 --~~l~~~~-~~a---~~--~~~ll~~r~l~G~g~g~~~~~~~~~v~-~----~~~~~---~~~~~~s~~~~~~~~G~~~ 168 (438)
T PRK10133 105 --AALFWPA-AEI---MN--YTLFLVGLFIIAAGLGCLETAANPFVT-V----LGPES---SGHFRLNLAQTFNSFGAII 168 (438)
T ss_pred --HHHHHHH-Hhc---CC--HHHHHHHHHHHHHHHHHHHhhHHHHHH-H----hCChh---hHHHHHHHHHHHHHHHHHH
Confidence 1111100 111 12 223444455666666666665554442 3 22221 2222456677777788899
Q ss_pred hHHHHHHHHhhcch------------------hhHH----HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCC
Q 010361 308 GASLFGILLSKYEP------------------VTCL----KFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 365 (512)
Q Consensus 308 GP~lgGlL~s~~s~------------------~~~i----~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~ 365 (512)
||.+++.+.....+ .... ...+.. ...+....+......+ .|+. ++++
T Consensus 169 g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~-~~~v~~~~~~~~~~~~--~p~~---~~~~---- 238 (438)
T PRK10133 169 AVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMI-IVAIVLLVALLIMLTK--FPAL---QSDN---- 238 (438)
T ss_pred HHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc--CCCC---Cccc----
Confidence 99988876521100 0000 000000 0001111111111111 1111 0000
Q ss_pred CCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHH-HH-hCCCcchhHHHHHHHHH
Q 010361 366 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL-TQ-RGLNPSIIGGFSGLCAS 443 (512)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl-~~-lGls~~~iG~~~g~gav 443 (512)
. .++ + . .+..+.++..+++|.++..+...+++.............|+ ++ .|+++...|+......+
T Consensus 239 ----~-~~~-~--~----~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~ 306 (438)
T PRK10133 239 ----H-SDA-K--Q----GSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV 306 (438)
T ss_pred ----c-ccc-c--c----cchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Confidence 0 000 0 0 11223455667888766544433444322112223445675 33 69999999999999999
Q ss_pred HHHHHHHHHHHHHHhhChhhHHHHHHHHH
Q 010361 444 MGVAATFLSAYLVRRLGILKAGAAGLIFQ 472 (512)
Q Consensus 444 gGLlGt~lap~L~rRlG~~ragl~~l~~Q 472 (512)
++++|.++.+++.+|+|..|...++....
T Consensus 307 ~~~vG~~~~g~l~~r~g~~~~l~~~~~~~ 335 (438)
T PRK10133 307 CFFIGRFTGTWLISRFAPHKVLAAYALIA 335 (438)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 99999999999999999998876665433
No 50
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.15 E-value=6.4e-08 Score=105.31 Aligned_cols=283 Identities=15% Similarity=0.055 Sum_probs=161.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeeccc-----CChhH-HHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHS-----PRIPA-YICL 218 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~-----~Rr~v-mi~~ 218 (512)
++|+...++.-.+.+-+...+..-.+|.++.+..-+.-.++.+..+ .+|+ ++.++.|.++||+ +|||. +..+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~-~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~ 87 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLV-GQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLAT 87 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHH-HHHHHHHHHHHcccccCCCCchHHHHHH
Confidence 3444555666666677777788888888876653387778876443 4555 5899999999998 78875 5455
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHH
Q 010361 219 NTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLN 298 (512)
Q Consensus 219 dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~ 298 (512)
.+.-.+ +... ..+ ..+ ..+ .+.+++..++.+.+....+++.+. +-.|| .++ ++..++|+...
T Consensus 88 ~i~~~~----~~~~--~a~-~~~-~~~--l~~l~~~~~l~~~~~a~~~i~~~a-~~~~~----~~~---~~rg~~~~i~~ 149 (491)
T PRK11010 88 QLLLLV----AIAA--MGF-LEP-GTQ--LRWLAALAVVIAFCSASQDIVFDA-WKTDV----LPA---EERGAGAAISV 149 (491)
T ss_pred HHHHHH----HHHH--HHH-cCC-cch--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHh----cCh---hhhHHHHHHHH
Confidence 433111 1111 111 111 112 222333444555555555555443 22344 333 26899999999
Q ss_pred HHHHHHHHHhHHHHHHHHh-hcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcc
Q 010361 299 RIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADN 377 (512)
Q Consensus 299 ~Idl~~kilGP~lgGlL~s-~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 377 (512)
....+..++||.+++.+.. ..|......+..+ ..++..+ ....+ ++.++.++ +++ +
T Consensus 150 ~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~---l~ll~~l----~~~~~--~e~~~~~~------------~~~-~- 206 (491)
T PRK11010 150 LGYRLAMLVSGGLALWLADRYLGWQGMYWLMAA---LLIPCII----ATLLA--PEPTDTIP------------VPK-T- 206 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHH---HHHHHHH----HHHhc--CCCccccc------------ccc-c-
Confidence 9999999999999999988 3454332222221 1111111 11111 21110000 000 0
Q ss_pred hhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHH-HHHHHHHHHHHHHHHHH
Q 010361 378 IVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFS-GLCASMGVAATFLSAYL 455 (512)
Q Consensus 378 ~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~-g~gavgGLlGt~lap~L 455 (512)
..+...+.++.++++|-....+...+++.............|+. +.|+++..+|.+. ..+.+++++|+++.+++
T Consensus 207 ----~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L 282 (491)
T PRK11010 207 ----LEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGIL 282 (491)
T ss_pred ----hhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00112345556666664443333333332211123345666765 5899999999998 57778999999999999
Q ss_pred HHhhChhhHHHHHHHHHHH
Q 010361 456 VRRLGILKAGAAGLIFQAS 474 (512)
Q Consensus 456 ~rRlG~~ragl~~l~~Q~~ 474 (512)
.+|+|..|....+...+..
T Consensus 283 ~dr~g~~~~l~i~~~l~~l 301 (491)
T PRK11010 283 MQRLSLFRALMIFGILQGV 301 (491)
T ss_pred HHHHhHHHHHHHHHHHHHH
Confidence 9999988876655554443
No 51
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.14 E-value=4.4e-08 Score=102.86 Aligned_cols=279 Identities=11% Similarity=0.066 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc----CC-hhHHHHHHHHHHHHHHH
Q 010361 155 CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS----PR-IPAYICLNTVQAAAQLL 228 (512)
Q Consensus 155 g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~----~R-r~vmi~~dlvq~~~v~l 228 (512)
|++..+....+...=++.+..+..+ +...+|....+..+...+..|++|.+.||. +| |+.+..+-+.-+ +
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~----i 82 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFS----I 82 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHH----H
Confidence 4444555555555556666777778 999999999999999999999999999984 44 344544433211 1
Q ss_pred HHHHHHHHHhhcccCCCchhHHHH-HHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWF-FVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~-~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
+..+ .+ ..+. ........++ +..++.+....+.++.+.. +.+.+.++ +++..++++..+....+..++
T Consensus 83 ~~~~-~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-----l~~~~~~~--~~~R~~~~~~~~~~~~~g~~l 151 (437)
T TIGR00792 83 VLVL-LF--TTPD-FSATGKLVYAYITYILLGLFYSFVNIPYWS-----LVPAITLD--PRERESLSTFRRFGATLGGLL 151 (437)
T ss_pred HHHH-HH--hCCC-CCcchHHHHHHHHHHHHHHHHHhhcccHhh-----CcccccCC--HHHHHHHHHHHHHHHHHHHHH
Confidence 2112 12 1111 1111111122 2223344444444444332 34445543 246888888888777777777
Q ss_pred hHHHHHHHHhhcch---hhHHHHHHHHH-HHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhH
Q 010361 308 GASLFGILLSKYEP---VTCLKFAAGLI-MWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 308 GP~lgGlL~s~~s~---~~~i~~~~~~~-~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
++.+++.++..++. ..+....+.+. +..+...+ .....+ +|. +++.+ ++ + +.+
T Consensus 152 ~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~---~~~~~~--~e~--~~~~~-------~~-~-~~~------- 208 (437)
T TIGR00792 152 VAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLI---ICFFGT--KER--YSEIP-------KN-I-EKK------- 208 (437)
T ss_pred HHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHH---HHHcCC--Eec--CCCCC-------cc-c-ccC-------
Confidence 77777777654331 11111111111 11111111 111111 111 00000 00 0 000
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
...++.++..+++|-++..+...+++......+......|.+. .| ++...+.+.+...+++++++.+.+++.+|+|..
T Consensus 209 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~ 287 (437)
T TIGR00792 209 LSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK 287 (437)
T ss_pred CCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 1245677888899977765444433332211222334444443 45 567888888899999999999999999999988
Q ss_pred hHHHHHHHHH
Q 010361 463 KAGAAGLIFQ 472 (512)
Q Consensus 463 ragl~~l~~Q 472 (512)
++..++....
T Consensus 288 ~~~~~~~~~~ 297 (437)
T TIGR00792 288 ILFAGGILLM 297 (437)
T ss_pred HHHHHHHHHH
Confidence 8876665433
No 52
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.13 E-value=1.3e-07 Score=101.20 Aligned_cols=283 Identities=11% Similarity=-0.011 Sum_probs=151.0
Q ss_pred hHHHHHHHHHHHHHHHHHH----HHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWN----FAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~----FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
-+.++.+.++...+..+.. ++.|.+. .. + |....+.......+...+.+++.|.+.||++||++++.+.++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-Hc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 3556777777777766653 4556444 33 6 88999999999999999999999999999999999988876543
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+. ..+ ..+. .....+ .+.+++..++.|..+....+.....+. +| .++ ++..++++.......+
T Consensus 105 i~----~~~--~~~~-~~~~~~--~~~~~~~~~l~gi~~g~~~~~~~~~~~-~~----~~~---~~r~~~~~~~~~~~~~ 167 (452)
T PRK11273 105 AV----MLF--MGFV-PWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMV-HW----WSQ---KERGGIVSVWNCAHNV 167 (452)
T ss_pred HH----HHH--HHhh-hccccc--HHHHHHHHHHHHHHHhccchHHHHHHH-Hh----CCh---HHHHHHHHHHHHHHHh
Confidence 32 111 1111 000011 122333344555555544332222222 33 233 3678888887777666
Q ss_pred HH-HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHh
Q 010361 304 CE-IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVG 382 (512)
Q Consensus 304 ~k-ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (512)
+. +.+|++++.+....+......+... ..+...++..+.+++ .++....++.++..++ ..+...+.++ .+
T Consensus 168 g~~~~~~l~~~~~~~~~gw~~~f~i~~~---~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~-- 238 (452)
T PRK11273 168 GGGLPPLLFLLGMAWFNDWHAALYMPAF---AAILVALFAFAMMRD--TPQSCGLPPIEEYKND-YPDDYNEKHE-QE-- 238 (452)
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHHHHH---HHHHHHHHHHHHccC--CHhhcCCCChhhhhhc-cccccccccC-CC--
Confidence 64 6677655433322232222222111 111111111111111 0100000000000000 0000000000 00
Q ss_pred HHHHHHhH-hhhhcCcchhHHHHH-HHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 383 IEAIKLGW-KEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 383 ~~~i~eG~-~~y~~qpvl~asla~-alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
.+.++.+ +..+++|.++..... .+.+... ..+...++.|+++ .|+++...|......+++++.|.++++++.+|+
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~ 316 (452)
T PRK11273 239 -LTAKQIFMQYVLPNKLLWYIAIANVFVYLLR-YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV 316 (452)
T ss_pred -ccHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123333 335678876654333 3333322 3345577888886 699999999999999999999999999999998
Q ss_pred Ch
Q 010361 460 GI 461 (512)
Q Consensus 460 G~ 461 (512)
+.
T Consensus 317 ~~ 318 (452)
T PRK11273 317 FR 318 (452)
T ss_pred cc
Confidence 54
No 53
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.12 E-value=1.7e-07 Score=97.60 Aligned_cols=273 Identities=19% Similarity=0.133 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH--HHHHHHHHcccccee-eecccCChhHHHHHHHHHHHHHHHH
Q 010361 153 YACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGF--FSKLILIVGGPLVGK-LMDHSPRIPAYICLNTVQAAAQLLS 229 (512)
Q Consensus 153 ~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~--~~~Lp~ll~gp~aG~-lvDR~~Rr~vmi~~dlvq~~~v~ls 229 (512)
..-.+..-+.-.+..-.+|.++.+..-|...+|+++. .-.+-..+.+|+.+. ..||++|||.++..- |... .
T Consensus 7 ~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~--~~~~---~ 81 (390)
T TIGR02718 7 GLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM--QCLV---S 81 (390)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH--HHHH---H
Confidence 3344555566677888888888877448888888753 336666889999966 689998888754442 2211 1
Q ss_pred HHHHHHHHhhcccCCCchhHHHHH-HHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHh
Q 010361 230 AAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (512)
Q Consensus 230 ~~li~~~~~~~~~~~~~l~~~l~~-v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilG 308 (512)
..+..... ... .... ..++. ...+.+..... .+++.+. +.+.-. ++++....|+.....-.+..++|
T Consensus 82 ~~~~~~~~-~~~-~~~~--~~~~~~~~~~~~~~~a~----~d~~~d~-~~~~~~---~~~~~~~~~~~~~~g~~lG~~~g 149 (390)
T TIGR02718 82 ACLASLAL-VGP-DVAG--AGWAVGLLACASLASAT----QDIATDG-MAAEHF---NGRTLAKGNAVQIAGVMIGFFGG 149 (390)
T ss_pred HHHHHHHc-CCc-chhh--HHHHHHHHHHHHHHHHH----HHHHHHH-HHHHhC---CHhhhhHHHHHHHHHHHHHHHHH
Confidence 00111110 111 0110 11222 22222222333 3333321 111111 12245556655554445566666
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHH
Q 010361 309 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKL 388 (512)
Q Consensus 309 P~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~e 388 (512)
+.+.|.+.+.++......+..++.+.. .. .. ..+ .++ +++++ +.+ ++ ...
T Consensus 150 ~~~~~~l~~~~gw~~~f~~~a~l~~~~---~~---~~-~~~-~~~---~~~~~----------~~~-----~~----~~~ 199 (390)
T TIGR02718 150 GAGTLVLFGKFGQRPAFLLVACVPLAS---LV---CV-LWL-KDR---AVASP----------EAP-----LA----RRA 199 (390)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH---HH---HH-HHc-CCC---CcCcc----------ccc-----hh----hHH
Confidence 666667777777554332222211111 11 11 111 110 00000 000 00 112
Q ss_pred hHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHH-HHHHHHHHHHHHHHHhhChhhHHHH
Q 010361 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCA-SMGVAATFLSAYLVRRLGILKAGAA 467 (512)
Q Consensus 389 G~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~ga-vgGLlGt~lap~L~rRlG~~ragl~ 467 (512)
.++.++|+|.++..+...+++........+....|+++.|+++..+|++.+..+ +++++|.++.+++.+|+|..|...+
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~ 279 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFIL 279 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 355677888766655555555432123445667788889999999999998876 5777899999999999999998877
Q ss_pred HHHHH
Q 010361 468 GLIFQ 472 (512)
Q Consensus 468 ~l~~Q 472 (512)
+...+
T Consensus 280 ~~~~~ 284 (390)
T TIGR02718 280 GVGLA 284 (390)
T ss_pred HHHHH
Confidence 66655
No 54
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.12 E-value=4.2e-08 Score=102.07 Aligned_cols=294 Identities=12% Similarity=0.010 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC--------hhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHH
Q 010361 158 AGNLVEQLWNFAWPSAIALLHPS--------LLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLS 229 (512)
Q Consensus 158 lS~~Gdri~~FAlpL~~~~l~~S--------ll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls 229 (512)
+..+...+...++|.......-+ ..+.+....+..+...+.+++.|.+.||++||+++....++..+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~---- 114 (481)
T TIGR00879 39 MFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIG---- 114 (481)
T ss_pred hcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHH----
Confidence 33344555555666555444324 678889999999999999999999999999999998877654322
Q ss_pred HHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhH
Q 010361 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA 309 (512)
Q Consensus 230 ~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP 309 (512)
..+..+ ... ..+ .+.+++.-++.|.......+.....+ .|| .++ ++..++.+.....-.+..++||
T Consensus 115 ~~~~~~---~~~-~~~--~~~~~~~r~l~G~~~~~~~~~~~~~i-~~~----~~~---~~r~~~~~~~~~~~~~G~~~~~ 180 (481)
T TIGR00879 115 AILMGL---AAF-ALS--VEMLIVGRVLLGIGVGIASALVPMYL-SEI----APK---ALRGALTSLYQLAITFGILVAY 180 (481)
T ss_pred HHHHHH---hcc-ccc--hHHHHHHHHHHHhhhhHHHhHHHHHH-Hcc----CCh---hhhhhhhhHHHHHHHHHHHHHH
Confidence 111111 111 011 12233444455554444444333322 343 333 2678888888888888899999
Q ss_pred HHH---HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-c-ccccccc--ccCCCCCCCCCCCCcchhH--
Q 010361 310 SLF---GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGV-L-DRAKCSQ--SCCRTSNEGPVPDADNIVD-- 380 (512)
Q Consensus 310 ~lg---GlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~-l-~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 380 (512)
.++ +.+....+......+... ..+ ..++..+.+.. .+. . .+.+.++ +..++..+..+++. ...+
T Consensus 181 ~~~~~~~~~~~~~~w~~~f~~~~~---~~~-~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 253 (481)
T TIGR00879 181 GFGSGKVSLNNTLGWRIPLGLQLI---PAG-LLFLGLFFLPE--SPRWLVGKGRVEEARKSLARLRGTSGEDK-ELLDEL 253 (481)
T ss_pred HHHHHhhcCCCCccHHHHHHHHHH---HHH-HHHHHHhcCCC--ChHHHHHcCChHHHHHHHHHHhCCCCCcH-HHHHHH
Confidence 988 544343433322222111 111 11111111110 000 0 0000000 00000000000000 0000
Q ss_pred HhHHH--------HHHhHhhhhcC--cchhHHHHHH----HHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHH
Q 010361 381 VGIEA--------IKLGWKEYMQQ--PVLPASLAYV----LLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGV 446 (512)
Q Consensus 381 ~~~~~--------i~eG~~~y~~q--pvl~asla~a----lL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGL 446 (512)
...+. .+..|+..++. +..+..+... +.++..........+.+..+.|++....+.......++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 333 (481)
T TIGR00879 254 ELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNF 333 (481)
T ss_pred HHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 00000 00112222221 1122222221 1112110111222333445689999999999999999999
Q ss_pred HHHHHHHHHHHhhChhhHHHHHHHHHHHHH
Q 010361 447 AATFLSAYLVRRLGILKAGAAGLIFQASLL 476 (512)
Q Consensus 447 lGt~lap~L~rRlG~~ragl~~l~~Q~~~L 476 (512)
+|.++.+++.+|+|..+....+.....+++
T Consensus 334 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 334 AFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999999999999888777655444443
No 55
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.09 E-value=1.9e-07 Score=100.83 Aligned_cols=282 Identities=8% Similarity=-0.022 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecc----cCC-hhHHHHHHHHHHHHHHH
Q 010361 155 CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDH----SPR-IPAYICLNTVQAAAQLL 228 (512)
Q Consensus 155 g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR----~~R-r~vmi~~dlvq~~~v~l 228 (512)
|++-.++...+...=++.|..+..+ ++..+|+.-++..+--.+..|.+|.+.|| ++| |+.+...-+...+
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i---- 89 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSV---- 89 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHH----
Confidence 3333344344433335666677778 99999999888888889999999999995 466 5555555443221
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHH-HHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~-v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
+..+ ++ .. +.........++. ..++.+..-.+.++.+. .+.+.+.++ +++.++.++.-+..-.++.++
T Consensus 90 ~~~l-lf--~~-p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~-----al~~~lt~~--~~eR~~l~~~~~~~~~ig~~~ 158 (473)
T PRK10429 90 VLFL-LF--SA-HLFEGTAQYVFVCVTYILWGMTYTIMDIPFW-----SLVPTLTLD--KREREQLVPYPRFFASLAGFV 158 (473)
T ss_pred HHHH-HH--cC-CCCCccHHHHHHHHHHHHHHHHHHHHcchHH-----hhhHHhCCC--HHHHHHHHHHHHHHHHHHHHH
Confidence 2112 12 11 1111111112222 22233444445444443 345567754 257888898866556666666
Q ss_pred hHHHHHHHHhhcch---hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHH
Q 010361 308 GASLFGILLSKYEP---VTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (512)
Q Consensus 308 GP~lgGlL~s~~s~---~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
++.++..++..++. ..+......+......... ..+...+ +| +.+++.. +++.+.+ .
T Consensus 159 ~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~--~~~~~~~--~e--~~~~~~~-------~~~~~~~-------~ 218 (473)
T PRK10429 159 TAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVST--IITLRNV--HE--VYSSDNQ-------VSAEGSH-------L 218 (473)
T ss_pred HHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH--HHHHcCc--ee--cCCcccc-------ccccccC-------C
Confidence 66666655443331 1111111111111111111 1111111 11 1000000 0000000 1
Q ss_pred HHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhH
Q 010361 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (512)
Q Consensus 385 ~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ra 464 (512)
.+++.++..++||-++..+...+++........+.+..|.+...-++...+.+.+..+++++++..+.+++.||+|..++
T Consensus 219 ~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~ 298 (473)
T PRK10429 219 TLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRIL 298 (473)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 25677788888887777655554443321223344444444433367788889998889999999999999999999998
Q ss_pred HHHHHHH
Q 010361 465 GAAGLIF 471 (512)
Q Consensus 465 gl~~l~~ 471 (512)
..++...
T Consensus 299 ~~~~~~~ 305 (473)
T PRK10429 299 WAGASIF 305 (473)
T ss_pred HHHHHHH
Confidence 8766653
No 56
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.09 E-value=7.9e-08 Score=98.61 Aligned_cols=250 Identities=13% Similarity=0.031 Sum_probs=140.0
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCch
Q 010361 168 FAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSML 247 (512)
Q Consensus 168 FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l 247 (512)
..+|.+..+..-|...++.......+...+.+++.|.+.||++|||++....++..+ + .+.. .. .+
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~----~--~~~~--~~----~~-- 86 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAA----G--ILIR--SA----PG-- 86 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHH----H--HHHH--Hh----cc--
Confidence 345555544433888899999999999999999999999999999998887654322 1 1111 11 11
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHH
Q 010361 248 LHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKF 327 (512)
Q Consensus 248 ~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~ 327 (512)
.+.+++..++.|.............+ .+| .+ ++..++++.......++..+||.+++.+....+...-..+
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~-~~~----~~----~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f 157 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLI-KRD----FP----QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQAL 157 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHH-HHh----Cc----chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 12223333334443333332222222 232 22 2567788888888888889999999888765432111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHHHHHHH
Q 010361 328 AAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVL 407 (512)
Q Consensus 328 ~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~al 407 (512)
............ ..+ ++.+++++++ ++.. +..++..+++|.+........
T Consensus 158 --~~~~~~~~~~~~--~~~-----~~~~~~~~~~----------~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 207 (355)
T TIGR00896 158 --AWWALPALLALL--AWI-----PQVRRRVAAN----------QTTT-----------RLTPVRIWRSPLAWQVTVFFG 207 (355)
T ss_pred --HHHHHHHHHHHH--HHh-----hhhccccCCC----------CCCC-----------CCCCchhhcCHhHHHHHHHHH
Confidence 111110111110 111 1100000000 0000 012344566775554333222
Q ss_pred HHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhCh-hhHHHHHHH
Q 010361 408 LCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI-LKAGAAGLI 470 (512)
Q Consensus 408 L~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~-~ragl~~l~ 470 (512)
++......+...++.|+++.|+++...|.+.+...+++++|.++.+++.+|++. .+...++..
T Consensus 208 ~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~ 271 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAV 271 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHH
Confidence 222111223345677887889999999999999999999999999999999954 444444443
No 57
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.09 E-value=2.3e-08 Score=107.32 Aligned_cols=294 Identities=13% Similarity=0.002 Sum_probs=158.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHH
Q 010361 150 YALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLS 229 (512)
Q Consensus 150 ~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls 229 (512)
-.++.+.++..........+.|-+..+..-|..+.+....+..+.+.+..++.|.++||++||+++..+-++-.+. .
T Consensus 32 ~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~---~ 108 (467)
T PRK09556 32 LVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAIC---M 108 (467)
T ss_pred HHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHH---H
Confidence 3455566666666667778888766655448889999999999999999999999999999999987776543222 1
Q ss_pred HHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhH
Q 010361 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA 309 (512)
Q Consensus 230 ~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP 309 (512)
+.+ ... .... ..+ .+.+++.-++.|..+.++.+.... +-.+|.|. + +..++++.....-.+..++||
T Consensus 109 ~~~-~~~-~~~~-~~~--~~~l~~~r~l~G~~~~~~~~~~~~-~i~~~~~~----~---~rg~a~gi~~~~~~lG~~l~~ 175 (467)
T PRK09556 109 LGF-GAS-LGSG-SVS--LGLMIALWALSGFFQSTGGPCSYS-TITRWTPR----R---KRGRFLGFWNISHNLGGAGAG 175 (467)
T ss_pred HHH-HHH-Hhcc-cch--HHHHHHHHHHHHHHHhccchHHHH-HHHHHcCc----c---ceeeeEEeeecccchhhhHHH
Confidence 111 010 0000 011 223344444566666665554443 33456443 2 567778887776677777777
Q ss_pred HHHHHHHhhc-c-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHH
Q 010361 310 SLFGILLSKY-E-PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK 387 (512)
Q Consensus 310 ~lgGlL~s~~-s-~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 387 (512)
.++..+.... + ..... +... .+..++..++ .+...+ ..|+..+.++.++..++ ...+++.....++ . ...
T Consensus 176 ~i~~~~~~~~~~~~~~~~-f~~~-g~~~~~~~i~-~~~~~~-~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~-~~~ 247 (467)
T PRK09556 176 GVALWGANYFFDGHVIGM-FIFP-SIIALIIGFI-GLRYGS-DSPEELGWGKAEEIFGE--PISEEDKETESTD-M-TKW 247 (467)
T ss_pred HHHHHHHHhhccCcchhH-HHHH-HHHHHHHHHH-HHHhCC-CChhhcCCCChhhcccC--ccchhhhcccccc-C-cHH
Confidence 7766655432 1 11111 1100 0111111111 111111 01111000000000000 0000000000000 0 011
Q ss_pred Hh-HhhhhcCcchhHHHHHH-HHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhH
Q 010361 388 LG-WKEYMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (512)
Q Consensus 388 eG-~~~y~~qpvl~asla~a-lL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ra 464 (512)
+. .++.+++|.+....... +.+... ..+...++.|+++ .|+++.+.|.......+++++|.++.+++.+|+|..+.
T Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~ 326 (467)
T PRK09556 248 QIFVEYVLKNPVIWLLCFANIFLYIVR-IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA 326 (467)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch
Confidence 21 23467888665543332 333221 2344567778875 79999999999999999999999999999999998776
Q ss_pred HHHH
Q 010361 465 GAAG 468 (512)
Q Consensus 465 gl~~ 468 (512)
....
T Consensus 327 ~~~~ 330 (467)
T PRK09556 327 LVAC 330 (467)
T ss_pred HHHH
Confidence 5443
No 58
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.08 E-value=1.3e-07 Score=101.61 Aligned_cols=278 Identities=9% Similarity=0.030 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 150 YALYACCLAGNLVEQLWNFAWPSAIA---LLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 150 ~~L~~g~~lS~~Gdri~~FAlpL~~~---~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
|.++++.++.......+.++++.+.. ..++ |.-..+.......+...+.+|+.|.++||++||++++.+.++-.+
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~- 96 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL- 96 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH-
Confidence 55666666665544444454554443 2334 666667666666666788899999999999999999888754322
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHH-HHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~-~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
.+.+..+. .+ .+.+++.. ++.|.....+.+.....+ .+|. ++ +..++++.....-.+.
T Consensus 97 ---~~~~~~~~-------~~--~~~l~~~~~~l~G~~~~~~~~~~~~~~-~~~~----~~----~r~~a~g~~~~~~~~g 155 (455)
T TIGR00892 97 ---GMILASFS-------SN--VIELYLTAGFITGLGLAFNFQPSLTML-GKYF----YR----RRPLANGLAMAGSPVF 155 (455)
T ss_pred ---HHHHHHHh-------hh--HHHHHHHHHHHHHhcchhhhhHHHHHH-HHHH----Hh----hHHHHHHHHHhcccHH
Confidence 11111111 11 11222222 233444333322222222 3453 22 4678888888888888
Q ss_pred HHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHH
Q 010361 305 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
..+||.++|.+...++......+...+.+ ...+ ..++.++. ++..+..+++. .++.+.+...+ +....+..+
T Consensus 156 ~~~~~~l~~~l~~~~gwr~~f~~~~~~~~---~~~v-~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~ 227 (455)
T TIGR00892 156 LSTLAPLNQYLFESFGWRGSFLILGGLLL---HCCV-CGALMRPV-GPSQRVSKSKS--KEGLPPDGSTK-KLSKKSTAE 227 (455)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHH---HHHH-HHHHhCCC-Ccccccccccc--cccCCCCCccc-cccccchhh
Confidence 89999999999887764433222221111 1111 11122211 01000000000 00000000000 000011122
Q ss_pred HHHHh--HhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 010361 385 AIKLG--WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR 458 (512)
Q Consensus 385 ~i~eG--~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rR 458 (512)
+..+. ++ +++||.++..+....+.+.........+..|+++.|+++...|.+.++.+++++++..+.+++.+|
T Consensus 228 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~ 302 (455)
T TIGR00892 228 KINRFLDFS-LFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGL 302 (455)
T ss_pred hhhhhcchH-HhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33332 33 568887665443333222221223345677877889999999999999999999999999998876
No 59
>PRK03699 putative transporter; Provisional
Probab=99.08 E-value=1e-07 Score=99.80 Aligned_cols=271 Identities=12% Similarity=0.019 Sum_probs=148.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v 226 (512)
+-++..+.+.++...-..+....+|-+..+..-|...++.......+...+..++.|.+.||++||++++.+.+...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~- 85 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA- 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-
Confidence 3445555555555555555556666655443338888998888888999999999999999999999988877553321
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHH
Q 010361 227 LLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (512)
Q Consensus 227 ~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ki 306 (512)
..+..+ . .+ .+.+++..++.|.............+. + ..+++ +...+++.....-.++.+
T Consensus 86 ---~~l~~~----~---~~--~~~~~~~~~l~G~~~g~~~~~~~~~i~-~----~~~~~---~r~~~~~~~~~~~~~g~~ 145 (394)
T PRK03699 86 ---VAGLMF----S---HS--LALFSIAMFVLGVVSGITMSIGTFLIT-H----VYEGK---QRGSRLLFTDSFFSMAGM 145 (394)
T ss_pred ---HHHHHH----c---ch--HHHHHHHHHHHHHhhHhhccchhHHhh-h----hcccc---hHHHHHHHHHHHHHHHHH
Confidence 111111 1 11 122333334455544443332222222 2 33332 445566666566666778
Q ss_pred HhHHHHHHHHhh-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHH
Q 010361 307 AGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (512)
Q Consensus 307 lGP~lgGlL~s~-~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (512)
++|.++|.++.. .+......+... ..+...+ +... ...|+.+ ++ + ++++ + + +
T Consensus 146 ~~~~~~~~l~~~~~gw~~~f~~~~~---~~~~~~~---~~~~-~~~p~~~--~~-~---------~~~~-~---~----~ 198 (394)
T PRK03699 146 IFPIIAAYLLARSIEWYWVYACIGL---VYVAIFI---LTLF-SEFPALG--KH-A---------PKAD-K---P----V 198 (394)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHH---HHHHHHH---HHHh-cCCcccc--cc-C---------cccc-C---c----c
Confidence 999998888653 343332222111 1111111 1111 1112110 00 0 0000 0 0 0
Q ss_pred HHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhH
Q 010361 386 IKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 464 (512)
Q Consensus 386 i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ra 464 (512)
.+..| +|.++......+++......+...++.|+++ .|+++.+.|.+.+...+++++|.++.+++.+|+|..|.
T Consensus 199 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 273 (394)
T PRK03699 199 AKEKW-----GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRI 273 (394)
T ss_pred ccccC-----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH
Confidence 01111 2222222222223322212344567788865 69999999999999999999999999999999999887
Q ss_pred HHHHHH
Q 010361 465 GAAGLI 470 (512)
Q Consensus 465 gl~~l~ 470 (512)
......
T Consensus 274 l~~~~~ 279 (394)
T PRK03699 274 LTVLAG 279 (394)
T ss_pred HHHHHH
Confidence 665443
No 60
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.03 E-value=4.4e-07 Score=96.40 Aligned_cols=274 Identities=16% Similarity=0.084 Sum_probs=168.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH---HHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAI---ALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~---~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
.+.--..-.++.|+=.+.||...=++ +.-++ |.-.+|..-....+-..+.+|+...+.||+|||+++...-.+=.+
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~ 90 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIV 90 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHH
Confidence 33344566788888889998765433 22234 777777777788888899999999999999999998887643222
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHH-HHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v-~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+-.+..++ .+ ...+.+. ++.--+...+..++..++. + +++++ +-.+|=+.+-.--.+
T Consensus 91 ----~n~l~alA-------p~--f~~Ll~aR~~~g~a~G~f~~i~~~~a~--~----lvpp~---~~~~Aiaiv~~G~tl 148 (394)
T COG2814 91 ----SNLLSALA-------PS--FAVLLLARALAGLAHGVFWSIAAALAA--R----LVPPG---KRGRALALVFTGLTL 148 (394)
T ss_pred ----HHHHHHHh-------cc--HHHHHHHHHHHHHHHHHHHHHHHHHHH--H----HcCcc---chhhHHHHHHHHHHH
Confidence 11111111 11 1111111 1111223345555554443 2 78774 789999999999999
Q ss_pred HHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhH
Q 010361 304 CEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
+.++|.++|.++=+.+|.......... ..+...+ .....+ | +++.+ ++.+. +..
T Consensus 149 A~v~GvPLGt~ig~~~GWR~~F~~ia~---l~ll~~~---~~~~~l--P----~~~~~--------~~~~~------~~~ 202 (394)
T COG2814 149 ATVLGVPLGTFLGQLFGWRATFLAIAV---LALLALL---LLWKLL--P----PSEIS--------GSLPG------PLR 202 (394)
T ss_pred HHHHhccHHHHHHHHhhHHHHHHHHHH---HHHHHHH---HHHHhC--C----CccCC--------CCCCc------chh
Confidence 999999999999888875443322222 2222222 222222 2 01000 00001 111
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
++ --.+|||-++..+...++.++---..-+..-+|+.+ .|+++..++++.-+.++++++|+++.+++.+| +..
T Consensus 203 ~~-----~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~ 276 (394)
T COG2814 203 TL-----LRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR 276 (394)
T ss_pred HH-----HHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch
Confidence 11 124677766666665555543200111233445555 79999999999999999999999999999999 999
Q ss_pred hHHHHHHHHHHHHH
Q 010361 463 KAGAAGLIFQASLL 476 (512)
Q Consensus 463 ragl~~l~~Q~~~L 476 (512)
++.......+..++
T Consensus 277 ~~l~~~~~l~a~~~ 290 (394)
T COG2814 277 RALIAALLLLALAL 290 (394)
T ss_pred hHHHHHHHHHHHHH
Confidence 98887766555544
No 61
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.01 E-value=8.5e-07 Score=94.37 Aligned_cols=283 Identities=12% Similarity=0.017 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 151 ALYACCLAGNLVEQL----WNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 151 ~L~~g~~lS~~Gdri----~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
..+.+.++......+ +.+..|.+. + .+ |..+.+....+..+...+..++.|.+.||++||+++..+.++..+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~ 104 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLV-E-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV 104 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHH-H-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHH
Confidence 344455554444444 345566544 3 36 8889999999999999999999999999999999888776543321
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
..+ ... ......+ ...+++..++.|.............+. +| .+++ +..++++.......++.
T Consensus 105 ----~~~--~~~-~~~~~~~--~~~l~~~~~l~g~~~g~~~~~~~~~i~-~~----~~~~---~rg~~~~~~~~~~~~g~ 167 (438)
T TIGR00712 105 ----MLL--MGF-VPWATSS--IAIMFVLLFLNGWFQGMGWPPCGRTMV-HW----WSQS---ERGTIVSIWNCAHNIGG 167 (438)
T ss_pred ----HHH--Hhc-cccccch--HHHHHHHHHHHHHHhhcchHHHHHHHH-Hh----cCcc---cchhHHHHHHHHHHhHh
Confidence 111 110 0000011 112233333445444443332222222 33 3332 67889999888888888
Q ss_pred HHhHHHHHHHHhh-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-cccccCCCCCCCCCCCCcchhHHhH
Q 010361 306 IAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAK-CSQSCCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 306 ilGP~lgGlL~s~-~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
.++|.+.+.+... .+-.....+... .++...++..+.++ +.++..+ ++.+..+++.+++..+.. ..+ +
T Consensus 168 ~~~~~l~~~~~~~~~~w~~~f~~~~~---~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~ 237 (438)
T TIGR00712 168 GIPPLLVLLGMAWFNDWHAALYFPAI---CAIIVALFAFAMMR----DTPQSCGLPPIEEYRNDYPDDYNEKA-EQE--L 237 (438)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHH---HHHHHHHHHHHhcc----CCHHhcCCCCchhccccccccccccc-ccc--c
Confidence 8888887765542 222222211111 11111111111111 1011000 000000000000000000 000 0
Q ss_pred HHHHHh-HhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhCh
Q 010361 384 EAIKLG-WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (512)
Q Consensus 384 ~~i~eG-~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~ 461 (512)
+.++- ++..+++|.++......++++.....+....+.|+++ .|+++...|+.....++++++|.++.+++.+|++.
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 316 (438)
T TIGR00712 238 -TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFK 316 (438)
T ss_pred -chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11222 2346788877665444333322212344566778876 69999999999999999999999999999999965
Q ss_pred hh
Q 010361 462 LK 463 (512)
Q Consensus 462 ~r 463 (512)
.|
T Consensus 317 ~~ 318 (438)
T TIGR00712 317 GN 318 (438)
T ss_pred Cc
Confidence 44
No 62
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.99 E-value=8.3e-07 Score=94.40 Aligned_cols=152 Identities=9% Similarity=-0.032 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~l 228 (512)
+..+...-++--+.+.+....+|.+.....-|..+.+.......+..++.++++|.+.||++||+++....++..+.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g--- 81 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALG--- 81 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH---
Confidence 33444445555555666666667664433339999999999999999999999999999999999998887654332
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHh
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 308 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilG 308 (512)
+.+....... .+ .+.+++..++.|+...+..+..+..+. .+.++ ++-.+..+..+....+...+|
T Consensus 82 -~~l~~~~~~~----~~--~~~~l~~~~l~G~g~g~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~lG~~~g 146 (410)
T TIGR00885 82 -AFLFWPAAEI----MN--YTLFLVGLFILTAGLGFLETAANPYIL-----VMGPE---STATRRLNLAQSFNPFGSIIG 146 (410)
T ss_pred -HHHHHHHHhh----cc--HHHHHHHHHHHHhhHHHHHhhhhHHHH-----HHCCH---hHHHHHHHHHHHHHHHHHHHH
Confidence 1111111000 11 122333444555555555444333322 23443 256777888888899999999
Q ss_pred HHHHHHHHhh
Q 010361 309 ASLFGILLSK 318 (512)
Q Consensus 309 P~lgGlL~s~ 318 (512)
|.+++.++..
T Consensus 147 ~~i~~~l~~~ 156 (410)
T TIGR00885 147 MVVAQQLILS 156 (410)
T ss_pred HHHHHHHHhc
Confidence 9999998753
No 63
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.96 E-value=2.6e-07 Score=97.02 Aligned_cols=251 Identities=12% Similarity=-0.008 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 010361 166 WNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSS 245 (512)
Q Consensus 166 ~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~ 245 (512)
...++|.+..+..-|..+++.......+...+.+++.|.+.||++||+++..+-++-.+. .+...+ . ++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~------~~~~~~-a----~~ 96 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG------ALMREL-Y----PQ 96 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH------HHHHHH-C----cc
Confidence 345566665544338888898888889999999999999999999999999887654332 111111 1 11
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhc-chhhH
Q 010361 246 MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVTC 324 (512)
Q Consensus 246 ~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~-s~~~~ 324 (512)
.+.+++.-++.|.......+.....+ ++|.| + +..++++...........+||.+++.+.... +....
T Consensus 97 --~~~ll~~r~l~Gig~~~~~~~~~~~~-~~~~~----~----~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~ 165 (393)
T PRK09705 97 --SALLLSSALLGGVGIGIIQAVMPSVI-KRRFQ----Q----RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQT 165 (393)
T ss_pred --hHHHHHHHHHHHhHHHHHhhhhhHHH-HHHcc----c----cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 22334444455555555544433322 34422 2 4578888887777777888888888877654 22221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhH-HH
Q 010361 325 LKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SL 403 (512)
Q Consensus 325 i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~a-sl 403 (512)
..+... ..+ ..++ .. .....+ ++++++ +++. .. +..+++|..+. .+
T Consensus 166 ~~~~~~---~~~-~~~~--~~-~~~~~~---~~~~~~----------~~~~-----~~--------~~~l~~~~~~~l~~ 212 (393)
T PRK09705 166 LAWWAL---PAV-VALF--AW-WWQSAR---EVASSH----------KTTT-----TP--------VRVVFTPRAWTLGV 212 (393)
T ss_pred HHHHHH---HHH-HHHH--HH-HHHhcC---CCcccc----------CCCc-----CC--------cccccCHhHHHHHH
Confidence 111111 111 1111 11 111111 011000 0000 00 11123333222 22
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHH
Q 010361 404 AYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ 472 (512)
Q Consensus 404 a~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q 472 (512)
...+.++.. ..+...+..|+.++|+++...|...+..++++++|.++.+++.+|+|..+....+...+
T Consensus 213 ~~~~~~~~~-~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~ 280 (393)
T PRK09705 213 YFGLINGGY-ASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ 280 (393)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 222222221 22334566777788999999999999999999999999999999999888776665433
No 64
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.96 E-value=8.9e-07 Score=90.03 Aligned_cols=54 Identities=19% Similarity=0.030 Sum_probs=44.8
Q ss_pred hhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHH
Q 010361 416 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (512)
Q Consensus 416 ~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l 469 (512)
....++.|.+ +.|+++...|...+...++++++..+.+++.+|+|..+......
T Consensus 238 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~ 292 (394)
T TIGR00883 238 ITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFT 292 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 3445677775 47999999999999999999999999999999999888655433
No 65
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.93 E-value=6.3e-07 Score=95.08 Aligned_cols=271 Identities=14% Similarity=0.060 Sum_probs=155.4
Q ss_pred HHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeec----ccCChh-HHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010361 168 FAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMD----HSPRIP-AYICLNTVQAAAQLLSAAMIIHAHTVIP 241 (512)
Q Consensus 168 FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvD----R~~Rr~-vmi~~dlvq~~~v~ls~~li~~~~~~~~ 241 (512)
.-++-|..+..+ ++..+|+..++..+--.+..|+.|.++| |++||| -|...-+.- .++..+ .+ ...+
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~----~~~~~l-lf--~~~p 94 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILL----ALSFFL-LF--SPPP 94 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHH----HHHHHH-hh--cccc
Confidence 344555566667 8888888888888888999999999999 777665 333333221 122222 12 1111
Q ss_pred -cCCCchhHHH-HHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q 010361 242 -TSSSMLLHPW-FFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY 319 (512)
Q Consensus 242 -~~~~~l~~~l-~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~ 319 (512)
..+......+ ++..++.. ++....++.. +.+.|.+.++. ++-++.++.-+....++.++...+.+.++..+
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~----~~~t~~~i~~-~al~~~lt~~~--~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~ 167 (428)
T PF13347_consen 95 AGLSFTAKLVWLFVFYILFD----IAYTFVQIPY-NALIPELTPDP--DERTRLSSWRMIFSMIGSLLASFLAPILVSWF 167 (428)
T ss_pred chhhhhhHHHHHHHHHHHHH----HhhhhccCch-hhcCccccccH--hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 1111111112 22222233 3333334443 24667787653 47788888888877777777778888877766
Q ss_pred chhh----HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhc
Q 010361 320 EPVT----CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQ 395 (512)
Q Consensus 320 s~~~----~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~ 395 (512)
+... .........+......+ .....+ +| ++++ . ++. .....+++.++..++
T Consensus 168 g~~~~~~~~~~~~~v~~iv~~v~~~---i~~~~~--ke--~~~~-~-----------~~~-----~~~~~~~~~~~~~~~ 223 (428)
T PF13347_consen 168 GGGDTSNGYRWMALVLAIVGLVFFL---ITFFFV--KE--RSVE-V-----------TEQ-----EKKISLRDSLRSLFR 223 (428)
T ss_pred ccCccchHHHHHHHHHHHHHHHHhh---hhhhee--ee--cccc-c-----------ccc-----ccccccccchhhhcc
Confidence 5321 11221211122111111 111211 11 0000 0 000 011134667788889
Q ss_pred CcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHH
Q 010361 396 QPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS 474 (512)
Q Consensus 396 qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~ 474 (512)
||-++..+...+++........+....|.+. .|.+ ...+.+.....++++++..+.+++.||+|..|+...+......
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHH
Confidence 9988776555544433212234455666665 5655 7889999999999999999999999999999998888776555
Q ss_pred HHH
Q 010361 475 LLA 477 (512)
Q Consensus 475 ~L~ 477 (512)
+..
T Consensus 303 ~~~ 305 (428)
T PF13347_consen 303 GFL 305 (428)
T ss_pred HHH
Confidence 443
No 66
>PRK09848 glucuronide transporter; Provisional
Probab=98.92 E-value=1.4e-06 Score=92.86 Aligned_cols=277 Identities=10% Similarity=-0.001 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc----CChh-HHHHHHHHHHHHHH
Q 010361 154 ACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS----PRIP-AYICLNTVQAAAQL 227 (512)
Q Consensus 154 ~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~----~Rr~-vmi~~dlvq~~~v~ 227 (512)
.|++..+++..+...=++.|..+..+ +...+|.......+-..+..|++|.++||. +||| .+....+.-.
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~---- 90 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLM---- 90 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHH----
Confidence 56666666666554445567788878 999999999999999999999999999996 4444 4344433211
Q ss_pred HHHHHHHHHHhhcccC-CCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHH-----H
Q 010361 228 LSAAMIIHAHTVIPTS-SSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI-----D 301 (512)
Q Consensus 228 ls~~li~~~~~~~~~~-~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~I-----d 301 (512)
+...+ .+. ..... ........++..++.++...++.+.+.. +.+.+..+. ++..+.++.-... .
T Consensus 91 ~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-----l~~~~~~~~--~~r~~~~~~r~~~~~~~~~ 160 (448)
T PRK09848 91 IFSVL-VFW--VPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGS-----LATAMTQQP--QSRARLGAARGIAASLTFV 160 (448)
T ss_pred HHHHH-HHh--CcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhh-----hhhhhcCCH--HHHHHHHHHHHHHHHHHHH
Confidence 11111 121 11111 1111111222334455555565555443 222344432 3445554432211 2
Q ss_pred HHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHH
Q 010361 302 LLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDV 381 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (512)
.++-.++|.+++..-+.. ............+..+ +...++.... +|. .++ +.+ + .
T Consensus 161 ~~~~~~~p~i~~~~g~~~-~~~~~~~~~~~~v~~~---~~~~~~~~~~--~e~--~~~------------~~~-~---~- 215 (448)
T PRK09848 161 CLAFLIGPSIKNSSPEEM-VSVYHFWTIVLAIAGM---VLYFICFKST--REN--VVR------------IVA-Q---P- 215 (448)
T ss_pred HHHHHHHHHHHHhCCCch-hhhHHHHHHHHHHHHH---HHHHHHHcCc--Eec--cCC------------Ccc-C---C-
Confidence 234456666665321100 0000111111111111 1111111111 110 000 000 0 1
Q ss_pred hHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 382 GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 382 ~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
.+++.++..+++|.++......++++.....+....+.|.++ .|.++..-+++...+.++.++++.+.+++.+|+|
T Consensus 216 ---~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g 292 (448)
T PRK09848 216 ---SLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIG 292 (448)
T ss_pred ---CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 235567778899988776555544443322333444445554 6776665555555567888899999999999999
Q ss_pred hhhHHHHHHHHH
Q 010361 461 ILKAGAAGLIFQ 472 (512)
Q Consensus 461 ~~ragl~~l~~Q 472 (512)
..+...++....
T Consensus 293 ~~~~~~~g~~~~ 304 (448)
T PRK09848 293 KKNTFLIGALLG 304 (448)
T ss_pred cHHHHHHHHHHH
Confidence 998887776543
No 67
>PRK09669 putative symporter YagG; Provisional
Probab=98.90 E-value=2.8e-06 Score=90.55 Aligned_cols=276 Identities=11% Similarity=0.040 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHH----HHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccC----C-hhHHHHHHHHHHH
Q 010361 155 CCLAGNLVEQLW----NFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSP----R-IPAYICLNTVQAA 224 (512)
Q Consensus 155 g~~lS~~Gdri~----~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~----R-r~vmi~~dlvq~~ 224 (512)
++.+..+|..+. ..-++.|..+..+ ++..+|..-.+..+--.+..|..|.++||.+ | |+.|...-+.-.
T Consensus 13 ~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~- 91 (444)
T PRK09669 13 GYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFG- 91 (444)
T ss_pred hhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHH-
Confidence 344444444433 3335566667778 9999999999999999999999999999954 4 455554433221
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHH-HHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~-v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
++..+ .+ ..+. .+......++. ..++.+.+..+.++.+. .+.+.+..+. ++.++.++.-...-.+
T Consensus 92 ---i~~~l-~f--~~p~-~~~~~~~~~~~~~~~l~~~~~t~~~ip~~-----al~~~~t~~~--~eR~~l~~~r~~~~~~ 157 (444)
T PRK09669 92 ---VVCLL-TF--YTPD-FGATGKIIYACVTYILLSLVYTAINVPYC-----AMPGAITNDP--RERHSLQSWRFALSFI 157 (444)
T ss_pred ---HHHHH-HH--hCCC-CCcchHHHHHHHHHHHHHHHHHhhcchHH-----HhHHHhcCCH--HHHHHHHHHHHHHHHH
Confidence 12212 12 1221 11111112222 22344444444444443 2344455432 4677888887777777
Q ss_pred HHHHhHHHHHHHHhhcch---hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhH
Q 010361 304 CEIAGASLFGILLSKYEP---VTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVD 380 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~---~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (512)
..++++.++..+...++. ..+......+. .+...+....+.... +| +.+++ ++.+ .
T Consensus 158 G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~--~ii~~v~~~~~~~~~--~e--~~~~~------------~~~~---~ 216 (444)
T PRK09669 158 GGLIVSVIALPLVDILGKGDEQKGYFYAMMVM--GLLGVVLFFCCFFMT--KE--RYTPE------------VDNS---S 216 (444)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH--HHHHHHHHHHHhCCe--EE--ecCCC------------CcCC---C
Confidence 788888777666665432 11111111111 111111111111111 11 10000 0000 1
Q ss_pred HhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 381 VGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 381 ~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
..+++++..+++|-++..+...+++........+....|.+. .+ ++...+.+...+.+.+++|..+.+++.+|+
T Consensus 217 ----~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~ 291 (444)
T PRK09669 217 ----SVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF 291 (444)
T ss_pred ----CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 135667778899988776555444432212233344444443 33 344566677788899999999999999999
Q ss_pred ChhhHHHHHHHH
Q 010361 460 GILKAGAAGLIF 471 (512)
Q Consensus 460 G~~ragl~~l~~ 471 (512)
|..++..++...
T Consensus 292 gk~~~~~~~~~~ 303 (444)
T PRK09669 292 DRVRAFKWTIVA 303 (444)
T ss_pred ChHHHHHHHHHH
Confidence 998887766543
No 68
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.89 E-value=5.8e-07 Score=95.17 Aligned_cols=284 Identities=13% Similarity=0.045 Sum_probs=154.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHH
Q 010361 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (512)
Q Consensus 148 ~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v 226 (512)
-+..++++.++..+......++.|.+ ..-++ |...++....+..+...+.+++.|.+.||++||+++..+.++-.+.
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~- 86 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTM-GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA- 86 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhh-HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH-
Confidence 45567777777777777777888844 44445 8999999999999999999999999999999999987776543221
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHH
Q 010361 227 LLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (512)
Q Consensus 227 ~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ki 306 (512)
..+ ..+. .+ ...+++.-++.|..+....+.....+ .+|.| + ++..++++.....-.++.+
T Consensus 87 ---~~~--~~~~-----~~--~~~l~~~r~l~G~~~~~~~~~~~~~~-~~~~~----~---~~rg~~~~~~~~~~~~g~~ 146 (412)
T TIGR02332 87 ---STA--TMFA-----TG--PESLYLLRILVGIAEAGFLPGILLYL-TFWFP----A---YFRARANALFMIAMPVTMA 146 (412)
T ss_pred ---HHH--HHHh-----cC--HHHHHHHHHHHHHHHhhHHHHHHHHH-HHHcC----H---HHHHHHHHHHHHHHHHHHH
Confidence 111 1111 11 12234444455655555444433222 34433 2 2678889999888888999
Q ss_pred HhHHHHHHHHhh------cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----ccccc----CCCCCCCC
Q 010361 307 AGASLFGILLSK------YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAK-----CSQSC----CRTSNEGP 371 (512)
Q Consensus 307 lGP~lgGlL~s~------~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~-----~~~~~----~~~~~~~~ 371 (512)
+||+++|.+... .+......+.. +..+....+. + ..+ ++.++..+ +.+.. .++..+.+
T Consensus 147 ~~~~~~~~l~~~~~~~~~~gwr~~f~~~~---~~~l~~~~~~-~--~~~-~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 219 (412)
T TIGR02332 147 LGLILSGYILALDGLMALKGWQWLFLLEG---FPSVILGVMT-W--FWL-DDSPDKAKWLDEEDKKALKEMIDNDQLTLE 219 (412)
T ss_pred HHHHHHHHHHhCCCCCCccchhHHHHHHH---HHHHHHHHHH-h--hcc-CCCcccCCCCCHHHHHHHHHHHHhcccccc
Confidence 999999988742 23222222211 1111111111 1 111 11010000 00000 00000000
Q ss_pred CCCCcchhHHhHHHHHHhHhhhhcCcchhHH-HHHHHHHHHhhhhhhHHHHHHHHHh--CCCcchhHHHHHHHHHHHHHH
Q 010361 372 VPDADNIVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTAFLTQR--GLNPSIIGGFSGLCASMGVAA 448 (512)
Q Consensus 372 ~~~~~~~~~~~~~~i~eG~~~y~~qpvl~as-la~alL~~tvll~~~~l~v~yl~~l--Gls~~~iG~~~g~gavgGLlG 448 (512)
.++.. ..+. ....+.-|+..++ |.++.. +.+.+.+... ..+...++.|+.+. |+++...|.+.+...+++++|
T Consensus 220 ~~~~~-~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g 295 (412)
T TIGR02332 220 QPEGA-FAHA-AMPQRSMLREIFT-PAIMLYTLAYFCLTNTL-SAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFG 295 (412)
T ss_pred ccccc-cccc-cccHHHHHHHhcC-hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHH
Confidence 00000 0000 0001122333333 333222 2222111111 22334566777763 678889999999999999999
Q ss_pred HHHHHHHHHhhChhhH
Q 010361 449 TFLSAYLVRRLGILKA 464 (512)
Q Consensus 449 t~lap~L~rRlG~~ra 464 (512)
.++.+++.+|++..+.
T Consensus 296 ~l~~g~l~dr~~~r~~ 311 (412)
T TIGR02332 296 MIWWSRHSDRLKERKH 311 (412)
T ss_pred HHHHHHHhcccCccHH
Confidence 9999999999986653
No 69
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.84 E-value=1.4e-06 Score=92.64 Aligned_cols=266 Identities=15% Similarity=0.044 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc-CChhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010361 163 EQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS-PRIPAYICLNTVQAAAQLLSAAMIIHAHTVI 240 (512)
Q Consensus 163 dri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~-~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~ 240 (512)
-.+|.-=++.++....+ |..++|++..+..+..++++++.|.+.||+ +||+++..+.++..+ ...... ..
T Consensus 18 ~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~------~~~~~~-~~- 89 (418)
T TIGR00889 18 WGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGAL------LLFFAA-QV- 89 (418)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH------HHHHHH-Hh-
Confidence 33444444555555567 999999999999999999999999999998 557777766543211 111111 11
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q 010361 241 PTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 241 ~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s 320 (512)
.+ .+.+++..++.++.........+ ++..+|+.... . +..+.-.+.|..-.++-.+||.++|.+ +..+
T Consensus 90 ---~~--~~~~~~~~~l~~~~~~~~~~~~~-~l~~~~~~~~g-~----~~~~~~~~~r~~G~lG~~ig~~l~g~l-~~~~ 157 (418)
T TIGR00889 90 ---TT--PAGMFPVLLANSLAYMPTIALTN-SISYANLPQAG-L----DVVTDFPPIRVMGTIGFIAAMWAVSLL-DIEL 157 (418)
T ss_pred ---cC--HHHHHHHHHHHHHHHccHHHHHH-HHHHHHHhhcC-C----CchhcCCCeeeehhHHHHHHHHHHHHh-cccc
Confidence 11 12334333333332211111111 01111111000 0 011111122333346788899988877 3221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchh
Q 010361 321 PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLP 400 (512)
Q Consensus 321 ~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~ 400 (512)
......... ...+. .+ .+...+ ++.++++ + +++. +..+..+.+++..+|+|.+.
T Consensus 158 ~~~~f~~~~---~~~~~-~~---~~~~~~--~e~~~~~--~----------~~~~-----~~~~~~~~~~~~~~k~~~~~ 211 (418)
T TIGR00889 158 SNIQLYITA---GSSAL-LG---VFALTL--PDIPVAK--S----------TAKM-----SIKVMLGLDAFILFKNKRMA 211 (418)
T ss_pred hhHHHHHHH---HHHHH-HH---HHHhcC--CCCCCCc--c----------cccc-----CHHHHhhhhHHHHhcCCCee
Confidence 111111111 11111 11 111122 2111000 0 0000 01112233455678888765
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhCCCc--------chhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHH
Q 010361 401 ASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP--------SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ 472 (512)
Q Consensus 401 asla~alL~~tvll~~~~l~v~yl~~lGls~--------~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q 472 (512)
..+...++..............|+.+.|.++ ..+|.+.++..++++.+.+..+++.+|+|..+....+....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~ 291 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAW 291 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 5444333322211122234456666666554 67899999999999999999999999999998877776644
Q ss_pred HH
Q 010361 473 AS 474 (512)
Q Consensus 473 ~~ 474 (512)
.+
T Consensus 292 ~v 293 (418)
T TIGR00889 292 AL 293 (418)
T ss_pred HH
Confidence 43
No 70
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.83 E-value=1.9e-06 Score=92.15 Aligned_cols=248 Identities=12% Similarity=-0.065 Sum_probs=136.9
Q ss_pred ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHH
Q 010361 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAG 259 (512)
Q Consensus 180 Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg 259 (512)
+....|....+..+..++.++++|.+.||++||+++..+.++-.+. ..+..+... .+ ...+++.-++.|
T Consensus 74 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~----~~~~~~~~~-----~~--~~~l~~~r~~~G 142 (465)
T TIGR00894 74 SGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVI----SIVIPWAAG-----GG--IALVVFCRVIQG 142 (465)
T ss_pred CHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHH----HHHHHHHHH-----cC--chHHHHHHHHHH
Confidence 4555666666777888999999999999999999988877543221 111111100 11 122334444556
Q ss_pred HHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhc-chhhHHHHHHHHHHHHHHH
Q 010361 260 AVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVTCLKFAAGLIMWSLPV 338 (512)
Q Consensus 260 ~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~-s~~~~i~~~~~~~~~s~~s 338 (512)
..+....++... |++...++ ++..++++.......++.++||.++|.+.... +......+..+ +.+..
T Consensus 143 ~~~~~~~~~~~~-----~~~~~~~~---~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~---~~~~~ 211 (465)
T TIGR00894 143 LAQGSVSPATHK-----IIVKWAPP---KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGI---VGCAW 211 (465)
T ss_pred HhcccchhhHHH-----HHHhcCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhH---HHHHH
Confidence 655555544433 23334443 37899999999999999999999999998763 54332222111 11111
Q ss_pred HHHHHHHHHhhcccccccccccccc--CCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhh
Q 010361 339 MIILTWFTNKISSGVLDRAKCSQSC--CRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTP 416 (512)
Q Consensus 339 ~~ll~~~i~rv~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~ 416 (512)
.+ ..+...+ ..|+.++..++++. .+++.++.+.+. +.+..|+..+++|.+.......+.++.....+
T Consensus 212 ~~-~~~~~~~-~~p~~~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (465)
T TIGR00894 212 SL-LWFVFPA-DDPSIHPCISKFEKKYINSSLQGQKGST---------RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTIL 280 (465)
T ss_pred HH-HHHHHhc-CCcccCCCCCHHHHHHHHhhcccccCCC---------CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111110 01110000000000 000000000000 00123666778876655433332222221233
Q ss_pred hHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 417 GSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 417 ~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
...++.|+++ .|++....|++.++..+++++|.++.+++.+|++
T Consensus 281 ~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~ 325 (465)
T TIGR00894 281 PTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLK 325 (465)
T ss_pred HHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456778775 7999999999999999999999999999988765
No 71
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.83 E-value=5e-06 Score=90.04 Aligned_cols=291 Identities=12% Similarity=-0.006 Sum_probs=142.7
Q ss_pred cCCCCChhhhhhhccCCCCC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccc
Q 010361 127 TIPVLSEEEQNALAATPAHP---EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLV 202 (512)
Q Consensus 127 ~~~~l~~~~~~~~~~~~~~~---r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~a 202 (512)
++|+...+.+.+.+.-+..+ +.+...|...++..++...+....|.+.. -++ |....+.......+..++..++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~gls~~~~g~~~~~~~~~~~~~~~~~ 91 (476)
T PLN00028 13 ALPVDSEHKATEFRLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRD-NLNLTKSDIGNAGIASVSGSIFSRLAM 91 (476)
T ss_pred CCCcCcccccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45554444444444333332 33444555566666655555555554543 345 77788877777777778888999
Q ss_pred eeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEec
Q 010361 203 GKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLA 282 (512)
Q Consensus 203 G~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv 282 (512)
|.+.||++||+++..+-++-.+ ..+...+. .+ ...+++.-++.|..+....... .+-.+|.|
T Consensus 92 G~l~dr~G~r~~~~~~~~~~~~------~~~~~~~~-----~s--~~~l~~~r~l~G~~~~~~~~~~--~~i~~~~~--- 153 (476)
T PLN00028 92 GPVCDLYGPRYGSAFLLMLTAP------AVFCMSLV-----SS--ATGFIAVRFFIGFSLATFVSCQ--YWMSTMFN--- 153 (476)
T ss_pred HHHHHHhCChHHHHHHHHHHHH------HHHHHHHh-----cC--HHHHHHHHHHHHHHHHhhHHHH--HHHHHhcC---
Confidence 9999999999988776543221 11111111 11 1223333334454433222211 11124433
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhc---------chhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 010361 283 GINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY---------EPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGV 353 (512)
Q Consensus 283 ~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~---------s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~ 353 (512)
++ +...+++.....-.++..+||.+.+.+.... +-.....+.. +..++..++ ...+. +.
T Consensus 154 -~~---~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g---~l~l~~~l~----~~~~~-~~ 221 (476)
T PLN00028 154 -GK---IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPG---LLHIIMGIL----VLTLG-QD 221 (476)
T ss_pred -hh---heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH---HHHHHHHHH----HHHHc-Cc
Confidence 22 5667777776655556566655555443321 1111111111 111111111 11111 10
Q ss_pred ccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHH-HHHHHHHHHhhhhhhHHHHHHHHH-hCCCc
Q 010361 354 LDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTAFLTQ-RGLNP 431 (512)
Q Consensus 354 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~as-la~alL~~tvll~~~~l~v~yl~~-lGls~ 431 (512)
. ++. + .++.+++.+.+ + .+ ..+.++..++++.++.. +.+...+... ..+.+.++.|+.+ .|+++
T Consensus 222 ~--p~~-~--~~~~~~~~~~~-~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~l~~~~g~s~ 287 (476)
T PLN00028 222 L--PDG-N--YRELKKSGTMP-K---DS----FSKVLRYGVTNYRTWILALTYGYSFGVE-LTMDNIIAEYFYDRFGLSL 287 (476)
T ss_pred C--CCC-c--hhhHHhcCccc-c---cc----HHHHHHHHHcCchhHHHHHHHHHHHHHH-HHHHhHHHHHHHHhcCCCH
Confidence 0 000 0 00000000000 0 01 11234444556544332 2222222211 2233456677765 69999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 432 SIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 432 ~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
...|.+.+..++++++|.++.+++..|+|..
T Consensus 288 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 288 ETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 9999999999999999999999998888753
No 72
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.81 E-value=6.1e-06 Score=89.57 Aligned_cols=273 Identities=15% Similarity=0.067 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChh------HHHHHHHHHHHHHHHHHHHHHHH
Q 010361 164 QLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIP------AYICLNTVQAAAQLLSAAMIIHA 236 (512)
Q Consensus 164 ri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~------vmi~~dlvq~~~v~ls~~li~~~ 236 (512)
.+-..=+.-|-.+..+ ++..+|..-++..+-=.+.-|..|.++||.++|. ++..+.-. .+.+.+ .|
T Consensus 29 ~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~-----~i~~~l-~F- 101 (467)
T COG2211 29 GIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPF-----AIVAVL-LF- 101 (467)
T ss_pred HHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHH-----HHHHHH-HH-
Confidence 3333334444455566 8888888877778878999999999999876543 22222211 122222 12
Q ss_pred HhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 010361 237 HTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL 316 (512)
Q Consensus 237 ~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~ 316 (512)
..++.+.+.-....++.-++++..-++ .++-++ .+.|++..+ +++-++.|++=+....++.++--.+.+.+.
T Consensus 102 -~~p~~~~~~k~~ya~vtY~l~~l~YT~----vniPy~-al~~~iT~d--~~ER~~l~s~R~~~~~~g~~l~~~~~~plv 173 (467)
T COG2211 102 -ITPDFSMTGKLIYALVTYMLLGLGYTL----VNIPYG-ALGPEITQD--PQERASLTSWRMVFASLGGLLVAVLFPPLV 173 (467)
T ss_pred -cCCCcccCcchHHHHHHHHHHHHHHHh----eeCchh-hcchhhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111111123333344433233 334444 367778765 468899999888877777777666677777
Q ss_pred hhcchhh-HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhc
Q 010361 317 SKYEPVT-CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQ 395 (512)
Q Consensus 317 s~~s~~~-~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~ 395 (512)
+.++... ...+-...-.+.+...+..+++...++.+.. +.+ +.. .....+.++.+...++
T Consensus 174 ~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~----~~~-----------~~~----~~~~~~~~~~~~~~~~ 234 (467)
T COG2211 174 KLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV----ETQ-----------PTK----TGVKLKLKDSFLLIFK 234 (467)
T ss_pred HHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC----ccc-----------cCc----ccccccHHHHHHHHHc
Confidence 7665432 1112122223333333344455555432211 000 000 0011234555666778
Q ss_pred CcchhHHHHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHH
Q 010361 396 QPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (512)
Q Consensus 396 qpvl~asla~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~ 470 (512)
++-++..+...++++...--.+++++.|.+ .+|.++...+........+.++|..+.|++.||+|..++..++..
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~ 310 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLL 310 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH
Confidence 876666554444444331224567777776 489999999999999999999999999999999999999888743
No 73
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.81 E-value=5.5e-06 Score=87.02 Aligned_cols=241 Identities=10% Similarity=-0.097 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010361 159 GNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHT 238 (512)
Q Consensus 159 S~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~ 238 (512)
++-+-..+.+.+|.+..+..-|..+.+....+..+.+.+..++.|.+.||++||+++..+-+.- +. ..+...
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~-----~~-~~~~~~-- 74 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATF-----AA-AAGRLL-- 74 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHH-----HH-HHHHHH--
Confidence 4445556677788877665448888899888889999999999999999999998766543221 11 111111
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhh
Q 010361 239 VIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK 318 (512)
Q Consensus 239 ~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~ 318 (512)
.. .+ ...+++.-++.|..+...-+.... + .+|.| + ++..++++.+.....+..++||.+++.+...
T Consensus 75 ~~---~~--~~~l~~~R~l~G~g~~~~~~~~~~-~-~~~~~----~---~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~ 140 (368)
T TIGR00903 75 DP---FN--YEWLLACQLLAALGQPFLLNAFAP-A-ASQIR----E---ERRDLVISLLSFAMYLGIIFALAAGLKIYTA 140 (368)
T ss_pred Hh---cc--HHHHHHHHHHHHhHhHHHHHHHHH-H-HHHcC----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 10 11 122333333445444433323322 2 35543 2 3788999999999999999999999999876
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcc
Q 010361 319 YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV 398 (512)
Q Consensus 319 ~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpv 398 (512)
.+-.....+.. +..++..+ .....+ |+. ++... +..+ . ++..+.++..++||.
T Consensus 141 ~gWr~~f~~~~---~l~~~~~~---~~~~~l--p~~--p~~~~------------~~~~-~----~~~~~~~~~ll~~~~ 193 (368)
T TIGR00903 141 GGLQLLIIPIA---AVAAAGII---LVLAAL--PAL--PFQAA------------EGFG-F----KDAVKEFGALAGRKD 193 (368)
T ss_pred cchHHHHHHHH---HHHHHHHH---HHHHHc--CCC--CCCCC------------CCcc-h----HHHHHHHHHHHcChh
Confidence 66443222211 11111111 111222 211 11000 0000 0 111235677888987
Q ss_pred hhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHH
Q 010361 399 LPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAAT 449 (512)
Q Consensus 399 l~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt 449 (512)
+.......++++.....+.+-++.|+++.|++.. .|....+..++|++|.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~ 243 (368)
T TIGR00903 194 LWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIGV 243 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHH
Confidence 7665433333322222344567888877788865 5666666566555544
No 74
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.80 E-value=4.5e-06 Score=91.15 Aligned_cols=93 Identities=20% Similarity=0.217 Sum_probs=70.6
Q ss_pred hHHhHHHHHHhHhhhhcCcchhH-HHHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 010361 379 VDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLV 456 (512)
Q Consensus 379 ~~~~~~~i~eG~~~y~~qpvl~a-sla~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~ 456 (512)
....++++++-+|...|+|-+.. .++. ++|.-.+....++...|.+ +.|++..++..+.-+..+.++.|+++++++.
T Consensus 263 ~~~g~~~l~~t~k~~~~~~~~~~fLia~-~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~ 341 (477)
T PF11700_consen 263 LRFGFKRLWRTFKEIRKLRQLFLFLIAY-FLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQ 341 (477)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888888888884433 3333 3333222345567788887 5899999999999999999999999999999
Q ss_pred HhhChh--hHHHHHHHHH
Q 010361 457 RRLGIL--KAGAAGLIFQ 472 (512)
Q Consensus 457 rRlG~~--ragl~~l~~Q 472 (512)
||+|.. ++....+.+-
T Consensus 342 ~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 342 DRFGPKTKRTLLISLILW 359 (477)
T ss_pred HHhCCchhHHHHHHHHHH
Confidence 999999 7777666544
No 75
>PRK15075 citrate-proton symporter; Provisional
Probab=98.77 E-value=4.5e-06 Score=88.74 Aligned_cols=280 Identities=11% Similarity=-0.003 Sum_probs=138.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHH-H----HHH-HHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVA-V----MGF-FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~va-v----~~~-~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
...++.+.++..+.-....++.|.+..+...+....+ + ..+ ...+...+.+++.|.+.||++|||+++..-++-
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~ 96 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIM 96 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHH
Confidence 4446666666666666777788877776654332221 1 111 112223355788899999999999998876543
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchh---H-HHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLL---H-PWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLN 298 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~---~-~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~ 298 (512)
.+. + .+..+. . +..... . .+++.-++.|.......+... ++-.||. +++ +..++++...
T Consensus 97 ~~~---~-~l~~~~---~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~-~~~~e~~----p~~---~rg~~~~~~~ 159 (434)
T PRK15075 97 ASG---T-LLIAFV---P--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVS-VYLAEIA----TPG---RKGFYTSWQS 159 (434)
T ss_pred HHH---H-HHHHhC---C--cHHHHHHHHHHHHHHHHHHhhccccccHHHHH-HHHHhhC----Ccc---cchHHHHHHH
Confidence 221 1 111111 1 000000 0 011222233333222222222 2223443 332 6788888888
Q ss_pred HHHHHHHHHhHHHHHHHHhhcchh----hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCC
Q 010361 299 RIDLLCEIAGASLFGILLSKYEPV----TCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPD 374 (512)
Q Consensus 299 ~Idl~~kilGP~lgGlL~s~~s~~----~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~ 374 (512)
...+.+..+||.+++.+...+.+. .+-...+...+... .+ .+.+++ ..++.+ +..+ ++.+++
T Consensus 160 ~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~---~~-~~~~~~-~~~e~~--~~~~-------~~~~~~ 225 (434)
T PRK15075 160 ASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV---PF-IFLIRR-SLEETE--EFLA-------RKHRPS 225 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH---HH-HHHHHH-hcCCCH--HHHH-------hhhccc
Confidence 888888899999988875433210 00111111111111 11 111111 111100 0000 000000
Q ss_pred CcchhHHhHHHHHHhHhhhhcCc-chhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHH
Q 010361 375 ADNIVDVGIEAIKLGWKEYMQQP-VLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLS 452 (512)
Q Consensus 375 ~~~~~~~~~~~i~eG~~~y~~qp-vl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~la 452 (512)
.++. ++...+++ .+...+................++.|+++ .|+++.+.+++....++++++|+.+.
T Consensus 226 ----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (434)
T PRK15075 226 ----MREI-------FRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIG 294 (434)
T ss_pred ----cccH-------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111 22222232 11111111111111101223446777776 79999999999999999999999999
Q ss_pred HHHHHhhChhhHHHHHHH
Q 010361 453 AYLVRRLGILKAGAAGLI 470 (512)
Q Consensus 453 p~L~rRlG~~ragl~~l~ 470 (512)
+++.+|+|..+...++..
T Consensus 295 g~l~Dr~g~r~~~~~~~~ 312 (434)
T PRK15075 295 GALSDRIGRRPVLIAFTV 312 (434)
T ss_pred HHHHHHhcchHHHHHHHH
Confidence 999999998887665543
No 76
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.72 E-value=8.4e-07 Score=99.95 Aligned_cols=314 Identities=11% Similarity=0.003 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHH
Q 010361 155 CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI 233 (512)
Q Consensus 155 g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li 233 (512)
..+.+.+.......+++-+--. ++ +....|+......+..++..+++|.+.||.+|+|.+...-++-.+. +.+.
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~-F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg----~ll~ 115 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERR-FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLG----SFLL 115 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhh-hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHH----HHHH
Confidence 3444444445555555544332 44 6666788888888899999999999999999999887765543332 1111
Q ss_pred HHHHhh-cc-----------------------c----------------CC--CchhHHHHHHHHHHHHHHHHHhHhhhh
Q 010361 234 IHAHTV-IP-----------------------T----------------SS--SMLLHPWFFVLVLAGAVERLTGVALGV 271 (512)
Q Consensus 234 ~~~~~~-~~-----------------------~----------------~~--~~l~~~l~~v~~llg~i~~l~sva~~i 271 (512)
.+.+.. ++ . .. +.....+++.-++.|..+....+...
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~- 194 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI- 194 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc-
Confidence 111100 00 0 00 00011112223344443333333222
Q ss_pred hhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc-h---------------h-hHH-HHHHHHHH
Q 010361 272 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-P---------------V-TCL-KFAAGLIM 333 (512)
Q Consensus 272 averdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s-~---------------~-~~i-~~~~~~~~ 333 (512)
++-.||+| ++ +...+.+.+...-.+.-.+||+++|.+...+. . . .+. +..+.+..
T Consensus 195 ~~i~d~~~----~~---~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g 267 (633)
T TIGR00805 195 SYIDDFAK----SK---NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICG 267 (633)
T ss_pred hhhhccCC----cc---ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 33345433 32 67788888888888888999999999886541 0 0 111 11122111
Q ss_pred -HHHHHHHHHHHHHHhhcccccccc-c-cccccCCCCCCCC-CCCCcchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHH
Q 010361 334 -WSLPVMIILTWFTNKISSGVLDRA-K-CSQSCCRTSNEGP-VPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC 409 (512)
Q Consensus 334 -~s~~s~~ll~~~i~rv~~~~l~~~-~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~ 409 (512)
..+...+. +..+ ++.++++ + .+.+..++...+. +.+.+.......++....++.++++|.+...+....+.
T Consensus 268 ~l~~l~~v~----l~~~-p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~ 342 (633)
T TIGR00805 268 GVALLTSIP----FFFF-PKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVID 342 (633)
T ss_pred HHHHHHHHH----HHhC-ccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 11111111 1111 1111111 0 0000000000000 00000000112345556778899999887765554444
Q ss_pred HHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHH-HHHHHHHHHHHHHHhhC--hhhHHHHHHHHHHHHHHHHHHHHhc
Q 010361 410 LNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCAS-MGVAATFLSAYLVRRLG--ILKAGAAGLIFQASLLAMAVAVYWS 485 (512)
Q Consensus 410 ~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gav-gGLlGt~lap~L~rRlG--~~ragl~~l~~Q~~~L~~~v~~f~~ 485 (512)
+.+..++...++.|+.+ .|+++...|++.+...+ ++++|.++.+++.+|++ ..+...+++....+.+...+..|+.
T Consensus 343 ~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (633)
T TIGR00805 343 SLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLI 422 (633)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHee
Confidence 43334566678888874 79999999999998776 67899999999999998 4466666666666655554545554
Q ss_pred C
Q 010361 486 G 486 (512)
Q Consensus 486 g 486 (512)
+
T Consensus 423 ~ 423 (633)
T TIGR00805 423 G 423 (633)
T ss_pred c
Confidence 4
No 77
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.71 E-value=2e-05 Score=85.67 Aligned_cols=161 Identities=10% Similarity=-0.076 Sum_probs=111.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cC-ChhHHHHHHHHHHHHHHHccccceeeecc-cCChhHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALL--HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDH-SPRIPAYICLNT 220 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l--~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR-~~Rr~vmi~~dl 220 (512)
|++.++.++...++..++-.....-+|+|+... .+ |...++.......+...+..+++|.+.|| ++||+++..+-+
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~ 87 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGI 87 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHH
Confidence 778899999999999999988888899998775 66 88888988888888999999999999999 899999888876
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHH
Q 010361 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (512)
Q Consensus 221 vq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~I 300 (512)
+..+. .+... .. .+ .+.+++..++.+..+.++.+.....+ .||.| ++++.+..++-+.....
T Consensus 88 ~~~~g------~~~~~--~~---~~--~~~~~~~~~l~g~g~g~~~~~~~~~~-a~~~~----~~~~~~r~~~~~~~~~~ 149 (475)
T TIGR00924 88 VLMLG------HFMLA--MS---IY--PDLIFYGLGTIAVGSGLFKANPSSMV-GKLYE----RGDMPRRDGGFTLFYMS 149 (475)
T ss_pred HHHHH------HHHHH--hc---cc--HhHHHHHHHHHHhccccccCCHHHHH-HHhcC----CCCcccccceehhHHHH
Confidence 54321 11111 11 11 11223334445555545444333222 34333 22112455677788888
Q ss_pred HHHHHHHhHHHHHHHHhhcchhh
Q 010361 301 DLLCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 301 dl~~kilGP~lgGlL~s~~s~~~ 323 (512)
..++.++||.++|.+....+...
T Consensus 150 ~niG~~ig~~l~g~l~~~~g~~~ 172 (475)
T TIGR00924 150 INIGSFISPLLAGVIAENYGYHV 172 (475)
T ss_pred HHHHHHHHHHHHHHHHHhcChHH
Confidence 88999999999999988666443
No 78
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.70 E-value=2.7e-06 Score=92.26 Aligned_cols=282 Identities=12% Similarity=0.033 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccC-----ChhHHHHHHHHHHHHHHHH
Q 010361 156 CLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSP-----RIPAYICLNTVQAAAQLLS 229 (512)
Q Consensus 156 ~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~-----Rr~vmi~~dlvq~~~v~ls 229 (512)
++..-+. .+...+++-++-.-.+ |.-.++.+.....+||.+ -|+.|.++||++ ||+.|....++..
T Consensus 35 y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~------ 106 (468)
T TIGR00788 35 LFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGS------ 106 (468)
T ss_pred HHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHH------
Confidence 4444445 7777788888877777 999998888889999988 677999999997 7777777654321
Q ss_pred HHHHHHHHhhcccCCCchhHHHHH-HHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHH---HHHHHHHHH
Q 010361 230 AAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAV---LNRIDLLCE 305 (512)
Q Consensus 230 ~~li~~~~~~~~~~~~~l~~~l~~-v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~---l~~Idl~~k 305 (512)
.+.+..+... .+. ..+++ ..++.+......+++.+.-+ -| ..++ + + ...|+. .-+...+..
T Consensus 107 -~~~~~~l~~~---~~~--~~~~~~~~~l~~~~~a~~dv~~da~~-~e----~~~~-~--~-~~~~~~~s~~~~~~~~G~ 171 (468)
T TIGR00788 107 -AILYGLLPGK---VSS--AKVAAAFIFLAALAKALYDVLVDSLY-SE----RIRE-S--P-SAGPSLVSWMWGASATGG 171 (468)
T ss_pred -HHHHHhcccc---cch--HHHHHHHHHHHHHHHHHHHHhHHHHH-hh----hhhc-C--C-CcCCCeeeHHHHHHHHHH
Confidence 1111111111 111 12222 33444555556565554322 12 2222 1 1 222322 223344789
Q ss_pred HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-ccccccccCCCCCCCCCCC-CcchhHHhH
Q 010361 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLD-RAKCSQSCCRTSNEGPVPD-ADNIVDVGI 383 (512)
Q Consensus 306 ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 383 (512)
++|+.++|.+...++......+.++..+.. . .....+ +|.+ ..+++..++ +...... .........
T Consensus 172 ~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~----~---~~~~~~--~E~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 239 (468)
T TIGR00788 172 LISSLLGGPLLDKTLTRILFLITAALLLLQ----L---FVSNLS--KERRAFVRPRIGTY---LEMNMALLTLGVLANVK 239 (468)
T ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHH----H---HHHHhc--cccccccccccccc---chhhhhhhhhhHHHHHH
Confidence 999999999998777654333322211111 1 111111 2111 000000000 0000000 000000111
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHH-HHHhhhhhhHHHHHH---HHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGSLMTAF---LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL-~~tvll~~~~l~v~y---l~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl 459 (512)
+.+ .+.+..+++|.+...+.+.++ |... .+.....| ...+|+++..+|++.+.+++++++|..++.++.+|+
T Consensus 240 ~~~-~~l~~~l~~~~i~~~l~fifl~~~~~---~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~ 315 (468)
T TIGR00788 240 VQI-LGLRGAIQLLEIAKPLIFIFLSYANL---PGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF 315 (468)
T ss_pred HHH-HHHHHHHhcHHHHHHHHHHHHHHhhc---CCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 222 344445778876665555555 5432 22222211 125899999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHH
Q 010361 460 GILKAGAAGLIFQASLL 476 (512)
Q Consensus 460 G~~ragl~~l~~Q~~~L 476 (512)
+..++..++...+..+.
T Consensus 316 ~~r~~l~~~~~l~~~~~ 332 (468)
T TIGR00788 316 PYRLLFGVTTLLYTLSS 332 (468)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999888887776644
No 79
>PRK11462 putative transporter; Provisional
Probab=98.69 E-value=3.8e-05 Score=83.01 Aligned_cols=273 Identities=9% Similarity=-0.011 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc----CChh-HHHHHHHHHHHHHHH
Q 010361 155 CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS----PRIP-AYICLNTVQAAAQLL 228 (512)
Q Consensus 155 g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~----~Rr~-vmi~~dlvq~~~v~l 228 (512)
|.+..++-..+...=+..|..+..+ ++..+|..-++..+-=.+.-|.+|.++||. +||| -+...-+.- .+
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~----~i 92 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPF----GI 92 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHH----HH
Confidence 3333333333333334455556667 888888877777777789999999999985 4544 333332221 22
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHH-HHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~-v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
++.+ .| ..+. .+......++. .-++....-.+.++.+. .|.+.+.++ +++-+++++.-.....+..++
T Consensus 93 ~~~l-lf--~~p~-~s~~~~~~y~~~~~~~~~~~~t~~~ipy~-----al~~~lt~d--~~eRt~l~s~r~~~~~iG~~~ 161 (460)
T PRK11462 93 VCVL-AY--STPD-LSMNGKMIYAAITYTLLTLLYTVVNIPYC-----ALGGVITND--PTQRISLQSWRFVLATAGGML 161 (460)
T ss_pred HHHH-HH--hCCC-CCcchHHHHHHHHHHHHHHHHHHHhccHH-----HHHHHhcCC--HHHHHHHHHHHHHHHHHHHHH
Confidence 2222 22 1221 11111112222 22234444445444443 356667765 357889999888887877888
Q ss_pred hHHHHHHHHhhcchh---hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHH
Q 010361 308 GASLFGILLSKYEPV---TCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIE 384 (512)
Q Consensus 308 GP~lgGlL~s~~s~~---~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (512)
+|.++..++..++-. .+......+ ..++..+....+.... +|. .+++ ++ + .
T Consensus 162 ~~~~~~plv~~~g~~~~~~g~~~~~~i--~~ii~~i~~~i~~~~~--kE~--~~~~------------~~-~---~---- 215 (460)
T PRK11462 162 STVLMMPLVNLIGGDNKPLGFQGGIAV--LSVVAFMMLAFCFFTT--KER--VEAP------------PT-T---T---- 215 (460)
T ss_pred HHHHHHHHHHHhCCCchhhhHHHHHHH--HHHHHHHHHHHHHhcc--eec--cCCC------------cc-C---C----
Confidence 888877776655310 111111111 1111111111111111 111 0000 00 0 0
Q ss_pred HHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 385 ~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
.+++.++..++++-++..+...++++.......+.++.|.+. .| ++...+.+.+...+++++|+.+.+++.+|+|..+
T Consensus 216 ~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~ 294 (460)
T PRK11462 216 SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVT 294 (460)
T ss_pred CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 135567777888887776544444332212244455555554 44 3456778888889999999999999999999876
Q ss_pred HHHHHH
Q 010361 464 AGAAGL 469 (512)
Q Consensus 464 agl~~l 469 (512)
...++.
T Consensus 295 ~~~~~~ 300 (460)
T PRK11462 295 IFWWTN 300 (460)
T ss_pred HHHHHH
Confidence 655444
No 80
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.68 E-value=4.5e-05 Score=87.61 Aligned_cols=154 Identities=13% Similarity=0.037 Sum_probs=93.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALL---HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l---~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dl 220 (512)
+.+..+++++.-.+..+.+.+..+.+...+..+ ++ +....+.+..+..+..++.+++.|.+.||++||++++.+-+
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 334566677777777777776554444333222 34 77888888888899999999999999999999999888765
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHH
Q 010361 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (512)
Q Consensus 221 vq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~I 300 (512)
+..+. + .+..+. .+ .+.+++.-++.|.......+.... +-.+ +.++ +...+..+.++..
T Consensus 241 l~~i~---~-ll~afa-------~s--~~~llv~R~l~G~g~g~~~p~~~~-~isE----~~p~---~~Rg~~~g~~~~~ 299 (742)
T TIGR01299 241 VNGFF---A-FFSSFV-------QG--YGFFLFCRLLSGFGIGGAIPIVFS-YFAE----FLAQ---EKRGEHLSWLCMF 299 (742)
T ss_pred HHHHH---H-HHHHHH-------hh--HHHHHHHHHHHHHHHHHHHHHHHH-HHHH----HCCH---HHHHHHHHHHHHH
Confidence 43221 1 111111 11 122333333344433332222222 2223 3333 2566777888888
Q ss_pred HHHHHHHhHHHHHHHHhhc
Q 010361 301 DLLCEIAGASLFGILLSKY 319 (512)
Q Consensus 301 dl~~kilGP~lgGlL~s~~ 319 (512)
-.++.+++|.+++.++..+
T Consensus 300 ~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 300 WMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 8888889998888776543
No 81
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.67 E-value=2.3e-05 Score=83.33 Aligned_cols=53 Identities=13% Similarity=0.120 Sum_probs=42.8
Q ss_pred hHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHH
Q 010361 417 GSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (512)
Q Consensus 417 ~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l 469 (512)
...++.|+.+ .|++..+.|.+.++..+++.++..+.+++.+|+|..+...++.
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~ 316 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFG 316 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 3446667764 7999999999999988888888889999999999888665443
No 82
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.58 E-value=0.00031 Score=76.60 Aligned_cols=281 Identities=10% Similarity=0.050 Sum_probs=144.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
|++..-|.+-+++-+.-.++.-..+-+...-++ |.-+.+.....-.+...++-.+.|.++||++.|+++..+-++-.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i- 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII- 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH-
Confidence 566667777676666666666655554443466 888888888877888888878889999999999988877654322
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH----
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID---- 301 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id---- 301 (512)
+.+...+...+...+ .+.+++.-++.|.....+..... .+ +.|- ++ ++.-++++.....-
T Consensus 113 -----~~~~~~~a~~~~~~s--~~~lli~r~l~Gigg~~f~~~~~-~v-s~wf----p~---~~rG~A~Gi~~g~G~~G~ 176 (462)
T PRK15034 113 -----PCVWLGIAVQNPNTP--FGIFIVIALLCGFAGANFASSMG-NI-SFFF----PK---AKQGSALGINGGLGNLGV 176 (462)
T ss_pred -----HHHHHHHHHcccCCC--HHHHHHHHHHHHHHHHhHHHHHH-HH-HHHC----CH---hHhHHHHHHHHHHHhhHH
Confidence 121122111111112 23344444555554444433332 23 3343 32 25777777775333
Q ss_pred HHHHHHhHHHHHH-HHhhcch---------hhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCC
Q 010361 302 LLCEIAGASLFGI-LLSKYEP---------VTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGP 371 (512)
Q Consensus 302 l~~kilGP~lgGl-L~s~~s~---------~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~ 371 (512)
.++++++|.+.+. +++.++. ..+...+..+...-.....+..++. . + +.+
T Consensus 177 ~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~--~--~----~~~------------ 236 (462)
T PRK15034 177 SVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG--M--N----DIA------------ 236 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh--C--C----Ccc------------
Confidence 3345666665543 3332221 1111111111111111111111111 1 1 000
Q ss_pred CCCCcchhHHhHHHHHHhHhhhhcCcc-hhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHH
Q 010361 372 VPDADNIVDVGIEAIKLGWKEYMQQPV-LPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATF 450 (512)
Q Consensus 372 ~~~~~~~~~~~~~~i~eG~~~y~~qpv-l~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~ 450 (512)
+.+ ..+++ +...+|+|. ++.++.+...|-.. .+++..++.|+++ .++.........++.+.+.++..
T Consensus 237 --~~~----~~~~~----~~~vlk~~~~Wllslly~~tFG~f-vg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rp 304 (462)
T PRK15034 237 --SSR----ASIAD----QLPVLQRLHLWLLSLLYLATFGSF-IGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARS 304 (462)
T ss_pred --ccc----cCHHH----HHHHhCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHH
Confidence 000 01222 234667774 33333332222221 2344445555543 44444333334456677777788
Q ss_pred HHHHHHHhhChhhHHHHHHHHHHHHH
Q 010361 451 LSAYLVRRLGILKAGAAGLIFQASLL 476 (512)
Q Consensus 451 lap~L~rRlG~~ragl~~l~~Q~~~L 476 (512)
+.+++..|+|..|...++.+...++.
T Consensus 305 lgG~LADRiG~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 305 VGGAISDKFGGVRVTLINFIFMAIFS 330 (462)
T ss_pred hhHHHHHhcCchHHHHHHHHHHHHHH
Confidence 99999999999999888886555544
No 83
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.55 E-value=4.4e-05 Score=82.79 Aligned_cols=53 Identities=11% Similarity=-0.047 Sum_probs=43.2
Q ss_pred HHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHH
Q 010361 418 SLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (512)
Q Consensus 418 ~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~ 470 (512)
..++.|+++ .|+++...++......++.++|..+.+++.+|+|..+....+..
T Consensus 271 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 324 (490)
T PRK10642 271 TYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSV 324 (490)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 456677764 79998888888888899999999999999999999887655543
No 84
>PRK09952 shikimate transporter; Provisional
Probab=98.55 E-value=5.4e-05 Score=80.91 Aligned_cols=56 Identities=16% Similarity=0.215 Sum_probs=42.8
Q ss_pred HHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHH
Q 010361 418 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQA 473 (512)
Q Consensus 418 ~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~ 473 (512)
+.+..|++ +.|+++...+.+....++.+++|+.+.+++.+|+|..|...++.....
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~ 327 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGT 327 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 44566776 479998877666667777888899999999999999988777655433
No 85
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.48 E-value=2.3e-05 Score=83.63 Aligned_cols=308 Identities=15% Similarity=0.122 Sum_probs=178.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v 226 (512)
+-|.-.|+|+..=-+.-.-+++|.|-+..+.-=|.-+.|+.+....+.+=+-=-..|.+.||.|.|+.|-...+..++.
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~- 107 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIV- 107 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHH-
Confidence 3455577888888888888899999887666337888888888888888888888999999999999887776543221
Q ss_pred HHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHH
Q 010361 227 LLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEI 306 (512)
Q Consensus 227 ~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ki 306 (512)
.+++.+. .+ ....++..++-|..+...-++....+. .|-+. +||..... .=+....+..-
T Consensus 108 -----nil~Gfs-----~s--~~~~~~l~~lng~fQg~Gwpp~~~~i~-~Wfsr---~eRG~~~s----iWn~shNiGGa 167 (448)
T COG2271 108 -----NILFGFS-----PS--LFLFAVLWVLNGWFQGMGWPPCARTIT-HWFSR---KERGTWWS----IWNTSHNIGGA 167 (448)
T ss_pred -----HHHHhhh-----hH--HHHHHHHHHHHHHHhcCCCcHHHHHHH-HHcCc---cccCceEE----Eehhhhhcccc
Confidence 1112111 11 122233334455555555555444443 25443 33322222 22223444444
Q ss_pred HhHHHH--HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccccccccccccCCCCCCCC-CCCCcchhHHh
Q 010361 307 AGASLF--GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS-GVLDRAKCSQSCCRTSNEGP-VPDADNIVDVG 382 (512)
Q Consensus 307 lGP~lg--GlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~-~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 382 (512)
+.|++. |.+....+-..+..+..+ +.+...+ +++.+.++ |+-..- |+.++.+++..+. +++ + ....
T Consensus 168 l~~~~~~la~~~~~~~w~~~f~~pgi---iaiival---~~~~~~rd~Pqs~GL-P~ie~~~~d~~e~~~~~-~--~~~~ 237 (448)
T COG2271 168 LAPLVALLAFFAFHGGWRAAFYFPGI---IAIIVAL---ILLFLLRDRPQSEGL-PPIEEYRGDPLEIYEEE-K--ENEG 237 (448)
T ss_pred hHHHHHHHHHHHhccchhHHHHHHHH---HHHHHHH---HHHHHhCCCccccCC-CCHHHhhcCchhhhhhh-c--cCCC
Confidence 555555 555544443333333332 1121222 23333321 110000 0000001000000 000 0 0000
Q ss_pred HHHHHHhHhhhhcCcchhHH-HHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 383 IEAIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 383 ~~~i~eG~~~y~~qpvl~as-la~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
+....-=++|++++|.+... ++..++|+.= .+...=.+.|+.+ .|+|...-+...+.--++|+.|+++.+++..|+-
T Consensus 238 ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR-~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklf 316 (448)
T COG2271 238 LTAWQIFVKYVLKNKLIWLLALANVFVYVVR-YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLF 316 (448)
T ss_pred ccHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 11112236889999976654 6677888753 2344567889986 7999999999999999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010361 461 ILKAGAAGLIFQASLLAMAVAVYWSGS 487 (512)
Q Consensus 461 ~~ragl~~l~~Q~~~L~~~v~~f~~gs 487 (512)
-+|-+..++++... +.+|++.+|...
T Consensus 317 kgrR~p~~~i~~~~-i~~~~~~~w~~~ 342 (448)
T COG2271 317 KGRRGPMALIFMLL-ITASLVLYWLAP 342 (448)
T ss_pred ccccchHHHHHHHH-HHHHHHHHHcCC
Confidence 77777777764443 677888888664
No 86
>TIGR00898 2A0119 cation transport protein.
Probab=98.48 E-value=4.4e-05 Score=82.30 Aligned_cols=116 Identities=12% Similarity=0.029 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHH
Q 010361 181 LLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGA 260 (512)
Q Consensus 181 ll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~ 260 (512)
....++...+..+..++.+++.|.+.||++||++++.+.++..+. ..+..+ . .+ .+.+++.-++.|.
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~----~~~~~~---~----~~--~~~~~~~r~l~G~ 192 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVS----GVLTAF---S----PN--YTVFLVFRLLVGM 192 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHH----HHHHHH---c----cc--HHHHHHHHHHHHh
Confidence 566778888888889999999999999999999998877654332 111111 1 11 1223333344454
Q ss_pred HHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 010361 261 VERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS 317 (512)
Q Consensus 261 i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s 317 (512)
......+.... +-.| .++++ +...+++.....-.+..+++|.+++.+..
T Consensus 193 ~~~~~~~~~~~-~~~e----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 241 (505)
T TIGR00898 193 GIGGIWVQAVV-LNTE----FLPKK---QRAIVGTLIQVFFSLGLVLLPLVAYFIPD 241 (505)
T ss_pred hccchHHHHHH-Hhhe----ecChh---hhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 44443332222 2123 44442 56778888877778888999998887765
No 87
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.40 E-value=0.00017 Score=76.85 Aligned_cols=52 Identities=15% Similarity=0.071 Sum_probs=42.2
Q ss_pred HHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHH
Q 010361 425 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLL 476 (512)
Q Consensus 425 ~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~~L 476 (512)
.+.|++....++.....++++++++++.+++.+|+|..+...++.....++.
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~ 350 (479)
T PRK10077 299 KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGM 350 (479)
T ss_pred HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHH
Confidence 4578888777777777888899999999999999998888777776655544
No 88
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.36 E-value=7.3e-05 Score=78.44 Aligned_cols=280 Identities=16% Similarity=0.100 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHH
Q 010361 151 ALYACCLAGNLVEQLWN-FAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLL 228 (512)
Q Consensus 151 ~L~~g~~lS~~Gdri~~-FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~l 228 (512)
++..-+.+..++|.+.- +...||- -++ +.-+++.+-.++.++.+++|+++|.++||++||+.-+.--+.. .+
T Consensus 38 ~yl~vY~La~~aDWLQGpY~Y~LY~--~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily----~~ 111 (354)
T PF05631_consen 38 KYLLVYLLAMAADWLQGPYLYALYE--SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILY----SL 111 (354)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH----HH
Confidence 35667788899999874 4556663 467 8889999999999999999999999999999998755544333 23
Q ss_pred HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCC--chhHHHHHHHHHH-HHHHHHH
Q 010361 229 SAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGIN--RPIALAKANAVLN-RIDLLCE 305 (512)
Q Consensus 229 s~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~--~~~~L~~aNs~l~-~Idl~~k 305 (512)
+|.. - .. .+ .+.+++-=++.|. ++.....+.| +|.+.=.++. +++.|.+.=+.+. ..+.+..
T Consensus 112 scl~---k-~~----~~--~~~L~~GRvlgGi----aTSLLfS~FE-sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vA 176 (354)
T PF05631_consen 112 SCLT---K-HS----SN--YPVLLLGRVLGGI----ATSLLFSAFE-SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVA 176 (354)
T ss_pred HHHH---H-hc----cc--cHHHHHHHHHHHH----HHHHHHHHHH-HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHH
Confidence 3322 1 01 11 1222222223333 3333444444 4643311110 1134554444444 3334444
Q ss_pred HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHH
Q 010361 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (512)
Q Consensus 306 ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (512)
|++-.++-.+....+-..-.++.+.+.. ..+-..++.+.++++. ++..+ ..+..++
T Consensus 177 I~aGv~a~~l~~~~~~g~vaPF~~a~~~-----l~~~~~~I~~~W~ENy---------------g~~~~----~~~~~~~ 232 (354)
T PF05631_consen 177 IGAGVVANVLADWFGFGPVAPFDAAIVL-----LAVAAVLILKTWPENY---------------GDTSS----SSSLSGS 232 (354)
T ss_pred HHHhHHHHHHHHHhCCCCcchHHHHHHH-----HHHHHHHHHhcccccC---------------CCccc----ccchHHH
Confidence 5555555555444332111223221111 1111123333222211 00001 1234567
Q ss_pred HHHhHhhhhcCcchhH-HHHHHH----HHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHH-Hhh
Q 010361 386 IKLGWKEYMQQPVLPA-SLAYVL----LCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLV-RRL 459 (512)
Q Consensus 386 i~eG~~~y~~qpvl~a-sla~al----L~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~-rRl 459 (512)
.+++++...++|-... .++-++ +|..| -+.++-+... -.+.-.|++.+.--+..++|+-+++++. ++.
T Consensus 233 ~~~a~~~i~~d~ril~LG~~qslFE~smy~FV-----flWtPaL~~~-~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~ 306 (354)
T PF05631_consen 233 FREAWRAILSDPRILLLGLIQSLFEGSMYLFV-----FLWTPALDPD-DEELPLGLIFSSFMVAMMLGSSLFSRLLSKSL 306 (354)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHhe-----eeeeceecCC-CCCCCchHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8899999999874433 232222 22222 1222223311 1234599999999999999999998765 566
Q ss_pred ChhhHHHHHHHHHHHHHHHHHH
Q 010361 460 GILKAGAAGLIFQASLLAMAVA 481 (512)
Q Consensus 460 G~~ragl~~l~~Q~~~L~~~v~ 481 (512)
.+..........-.+++.+.+.
T Consensus 307 ~~e~~l~~v~~~aa~~l~~pv~ 328 (354)
T PF05631_consen 307 RPESLLRYVFAVAAVSLAIPVV 328 (354)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 6666665555555555655544
No 89
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.35 E-value=0.00091 Score=73.28 Aligned_cols=161 Identities=11% Similarity=-0.095 Sum_probs=96.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecc-cCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDH-SPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR-~~Rr~vmi~~dlvq 222 (512)
|+++++.++...++..++-.....-+|.|+....+ |....+..............+..|.+.|| ++||+++...-++.
T Consensus 19 ~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~ 98 (500)
T PRK09584 19 QPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVL 98 (500)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 55678888888888888887777778888877777 66555444433333444555789999999 59999888776553
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+. + .+ ..+. . .. ...+++..++.+....+..+.....+ .+|. ++++ .+..++-+.....-.
T Consensus 99 ~ig---~-~l--~~~~-~---~~--~~~l~~~~~l~gig~g~~~~~~~~l~-~~~f----~~~~-~~~~~~~~~~~~~~~ 160 (500)
T PRK09584 99 AIG---Y-AL--VAWS-G---HD--AGIVYMGMATIAVGNGLFKANPSSLL-STCY----EKDD-PRLDGAFTMYYMSIN 160 (500)
T ss_pred HHH---H-HH--HHHh-c---cc--HHHHHHHHHHHHHhhhcccCCHHHHH-HHhc----CCCc-hhhhhcchHHHHHHH
Confidence 321 1 11 1111 1 11 11122333344444444333332222 2332 2221 245556666677778
Q ss_pred HHHHHhHHHHHHHHhhcchhh
Q 010361 303 LCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s~~~ 323 (512)
++.++||.++|.+....|...
T Consensus 161 iG~~~gp~i~g~l~~~~g~~~ 181 (500)
T PRK09584 161 IGSFFSMLATPWLAAKYGWSV 181 (500)
T ss_pred HHHHHHHHHHHHHHHhhCHHH
Confidence 889999999999988766443
No 90
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.33 E-value=0.00023 Score=75.74 Aligned_cols=265 Identities=17% Similarity=0.106 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 161 LVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTV 239 (512)
Q Consensus 161 ~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~ 239 (512)
+.+.+-..=+|-+- ..++ |..++++.+++....+.+.+.++|.+++|+.+|+-++..-.+-++ .|.+ ++--..
T Consensus 27 ~~~~l~diLip~l~-~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~av----g~~l-F~pAa~ 100 (422)
T COG0738 27 FITCLNDILIPHLK-EVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAV----GAAL-FWPAAS 100 (422)
T ss_pred HHhhcchhhHHHHH-HHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHH----HHHH-Hhhhhh
Confidence 33444444455443 4455 999999999999999999999999999999999988887654432 2223 221000
Q ss_pred cccCCCchhHHHHHH-HHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHH---HHHHHHHhHHHHHHH
Q 010361 240 IPTSSSMLLHPWFFV-LVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI---DLLCEIAGASLFGIL 315 (512)
Q Consensus 240 ~~~~~~~l~~~l~~v-~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~I---dl~~kilGP~lgGlL 315 (512)
. . .+..|.+ ++++++.-.+.+++.+.-+ -.+-++ + .++.+|... ..+..++||.+++.+
T Consensus 101 ~---~---~y~~FL~~lFila~Gi~~LetaaNp~v-----~~lg~~----~--~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 101 S---K---SYGFFLVALFILASGIGLLETAANPYV-----TLLGKP----E--SAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred h---h---hHHHHHHHHHHHHhhhHHHHhccchHH-----HHhCCc----h--hHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 0 1 1222322 2334443334333333322 123332 1 455555544 455789999999999
Q ss_pred Hhh-----cchh-hHHHHHHHHHHHHHHH----HHH-HHHHHHhh-ccccccccccccccCCCCCCCCCCCCcchhHHhH
Q 010361 316 LSK-----YEPV-TCLKFAAGLIMWSLPV----MII-LTWFTNKI-SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI 383 (512)
Q Consensus 316 ~s~-----~s~~-~~i~~~~~~~~~s~~s----~~l-l~~~i~rv-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (512)
+-. .++. .-.........+..+- .++ .+..+... +.|+.+.. +++.. ..+
T Consensus 164 ils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~--------------~~~~~-~~~--- 225 (422)
T COG0738 164 ILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA--------------APSLG-ASG--- 225 (422)
T ss_pred HHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc--------------ccccc-ccc---
Confidence 773 1110 0000100000011110 000 00111111 11211100 00100 000
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
..+..+.+|||-++......++|.-+=-+.++.++.|+.+ .|+++.+-+...+..=++-++|=++..++++|+...
T Consensus 226 ---~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~ 302 (422)
T COG0738 226 ---SAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE 302 (422)
T ss_pred ---cchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 0156778899998888777888876533577889999987 899999999999999999999999999999999999
Q ss_pred hHHHHHH
Q 010361 463 KAGAAGL 469 (512)
Q Consensus 463 ragl~~l 469 (512)
|.....-
T Consensus 303 k~Laf~a 309 (422)
T COG0738 303 KYLAFYA 309 (422)
T ss_pred HHHHHHH
Confidence 9865433
No 91
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.28 E-value=8.4e-05 Score=79.78 Aligned_cols=283 Identities=13% Similarity=0.079 Sum_probs=142.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChh-HHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIP-AYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~-vmi~~dlvq 222 (512)
++++|+++-..++.--+.-.++.==+|+++.+.-+ |.-.+|+.-.+..+..+++.|..|.+.||...|| .+...-+..
T Consensus 5 ~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 5 KNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILL 84 (412)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHH
Confidence 45667776666655555544444444555555556 9999999999999999999999999999998544 444433211
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHH----HHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKAN----AVLN 298 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aN----s~l~ 298 (512)
++..+...+.+ .+ ++....++.+++.+..-.++-.+-..++|. .+ ++..|.| ++.|
T Consensus 85 ----~l~~pff~~v~--~p----ll~~n~~lg~iig~i~l~~~f~~~~~~~Ea-----~~-----er~sr~~~feYG~~R 144 (412)
T PF01306_consen 85 ----LLFGPFFIYVF--GP----LLQSNFWLGAIIGGIYLGLVFNAGVPLSEA-----YA-----ERVSRRNGFEYGRAR 144 (412)
T ss_dssp ----HTCHHHHHHTH--HH----HHHTT-HHHHHHTTTTTTTTTTTHHHHHHH-----HH-----HHHHHHHSS-HHHHH
T ss_pred ----HHHHHHHHHHH--HH----HHHHHHHHHHHHHHHHHHHHHcccchHHHH-----HH-----HHHHHHhcCCcchHH
Confidence 11222212211 00 000011111111111001100011111111 11 1233332 4556
Q ss_pred HHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcch
Q 010361 299 RIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNI 378 (512)
Q Consensus 299 ~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 378 (512)
.=-+++-.++..++|.+++. +|....+.. +....++ +.++...+ +. ++++. +..+ .+ +.++
T Consensus 145 ~wGSig~ai~s~~~G~L~~i-~p~~~fwi~------s~~~~il-~lll~~~~-~~--~~~~~--~~~~-~~----~~~~- 205 (412)
T PF01306_consen 145 MWGSIGFAIASLLAGILFNI-NPNIIFWIA------SAAAIIL-LLLLLLLK-PD--VPPQA--EVAD-AL----GAKK- 205 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHH------HHHHHHH-HHHHHSS------SSSSS---SST-TS----SS---
T ss_pred HHhhHHHHHHHHHhheeeee-CccHHHHHH------HHHHHHH-HHHHHHcC-Cc--Cchhh--hhhc-cc----ccCC-
Confidence 66678889999999999985 443322221 1111111 11111111 10 00100 0000 00 0000
Q ss_pred hHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHH----HhCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 010361 379 VDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT----QRGLNPSIIGGFSGLCASMGVAATFLSAY 454 (512)
Q Consensus 379 ~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~----~lGls~~~iG~~~g~gavgGLlGt~lap~ 454 (512)
++. . .......+|.|-+...+.+...--+.--.++.+...|.+ +.+.+...+|.+.+++.+.+.+.=+++|+
T Consensus 206 -~~~--~-~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~ 281 (412)
T PF01306_consen 206 -DKV--S-LKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPW 281 (412)
T ss_dssp --------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCC--c-HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHH
Confidence 000 1 122445678886666444322111111236666777765 35677889999999999999999999999
Q ss_pred HHHhhChhhHHHHHHH
Q 010361 455 LVRRLGILKAGAAGLI 470 (512)
Q Consensus 455 L~rRlG~~ragl~~l~ 470 (512)
+.+|+|..+..+.+..
T Consensus 282 li~rig~k~~Lllag~ 297 (412)
T PF01306_consen 282 LINRIGAKNLLLLAGV 297 (412)
T ss_dssp HHHHH-HHHHHHHHHH
T ss_pred HHHhcChHhHHHHHHH
Confidence 9999999887766543
No 92
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.21 E-value=0.0029 Score=68.83 Aligned_cols=150 Identities=13% Similarity=-0.042 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc----C-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHH
Q 010361 152 LYACCLAGNLVEQLWNFAWPSAIALLH----P-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQ 226 (512)
Q Consensus 152 L~~g~~lS~~Gdri~~FAlpL~~~~l~----~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v 226 (512)
...+.+.-.+...+..++.|.+--..+ + +....+.......+..++..++.|.+.||++||+++..+.++-.+.
T Consensus 21 ~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~- 99 (502)
T TIGR00887 21 AGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIA- 99 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH-
Confidence 344444444445555566665443221 1 2345567777788888999999999999999999988776543321
Q ss_pred HHHHHHHHHHHhhcccCCCch-hHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 227 LLSAAMIIHAHTVIPTSSSML-LHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 227 ~ls~~li~~~~~~~~~~~~~l-~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
+ .+ ....... .... ...+++.-++.|.......+... .+-.+| .++ +...++.+.+.....+..
T Consensus 100 --~-~~--~~~~~~~--~~~~~~~~~~~~r~l~G~~~g~~~~~~~-~~~~e~----~p~---~~Rg~~~~~~~~~~~~g~ 164 (502)
T TIGR00887 100 --T-VA--SGLSPGS--SPKSVMATLCFWRFWLGVGIGGDYPLSA-IITSEF----ATK---KWRGAMMAAVFAMQGFGI 164 (502)
T ss_pred --H-HH--HHHccCc--ccchHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHh----cCh---hhHHHHHHHHHHHHHHHH
Confidence 1 11 1111110 1110 11233333444554444333332 222343 333 256788888888888889
Q ss_pred HHhHHHHHHHHh
Q 010361 306 IAGASLFGILLS 317 (512)
Q Consensus 306 ilGP~lgGlL~s 317 (512)
++||.+++.+..
T Consensus 165 ~~g~~~~~~~~~ 176 (502)
T TIGR00887 165 LAGAIVALIVLA 176 (502)
T ss_pred HHHHHHHHHHHH
Confidence 999999887654
No 93
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.17 E-value=4.7e-05 Score=80.44 Aligned_cols=115 Identities=20% Similarity=0.188 Sum_probs=73.9
Q ss_pred ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHH-HHHH
Q 010361 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLA 258 (512)
Q Consensus 180 Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v-~~ll 258 (512)
+....|.++-.-.+-+.+-+|..|.+.||++||+++.+|.+.-+ ++ ..+|+... + ...+++ =++.
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va----~s--~ll~~~S~-----~---F~afv~aR~l~ 131 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVA----LS--YLLWALSR-----N---FAAFVLARFLG 131 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHH----HH--HHHHHHHH-----H---HHHHHHHHHhh
Confidence 55667777877888888999999999999999999998875422 12 11232111 1 112222 1233
Q ss_pred HHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 010361 259 GAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS 317 (512)
Q Consensus 259 g~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s 317 (512)
|+....-++...++ .| ++.+ ++-..+=+.+...-++.-++||++||.+..
T Consensus 132 Gi~kgnl~v~rAii--sd----V~se---k~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 132 GIFKGNLSVIRAII--SD----VVSE---KYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhccCchHHHHHHH--Hh----hcCh---hhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 44333333332221 23 5554 256667778888888999999999999987
No 94
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.16 E-value=0.0044 Score=67.91 Aligned_cols=161 Identities=10% Similarity=-0.081 Sum_probs=99.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecc-cCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDH-SPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR-~~Rr~vmi~~dlvq 222 (512)
|++.++.++..++..+++-....--+++|+....+ +.-.++.......+...++.+++|.+.|| ++|||++....++.
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~ 91 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVL 91 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHH
Confidence 77888888888888888888888778888877666 55544444333444455566789999999 99999999987665
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+. +..+ .+ ... .. ..+++...+.+....+..+.....+ .|+ .++++ ++..++-+.....-.
T Consensus 92 ~~g---~~~~-~~--~~~---~~---~ll~~~~~l~~ig~g~~~~~~~~li-~~~----~p~~~-~~~~~~~~~~~~~~n 153 (489)
T PRK10207 92 AIG---YFMT-GM--SLL---KP---DLIFIALGTIAVGNGLFKANPASLL-SKC----YPPKD-PRLDGAFTLFYMSIN 153 (489)
T ss_pred HHH---HHHH-HH--hcc---ch---hHHHHHHHHHHhccccccCCHHHHH-HHh----cCCCc-hhhhcchhHHHHHHH
Confidence 332 2111 11 110 01 1122333344444444333222222 232 33321 244556666777777
Q ss_pred HHHHHhHHHHHHHHhhcchhh
Q 010361 303 LCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s~~~ 323 (512)
++..+||.++|.+.+.+|-..
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~ 174 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSV 174 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHH
Confidence 888999999999988877433
No 95
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.14 E-value=0.0015 Score=71.50 Aligned_cols=261 Identities=12% Similarity=0.077 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHcC-ChhH-HHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 010361 167 NFAWPSAIALLHP-SLLP-VAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSS 244 (512)
Q Consensus 167 ~FAlpL~~~~l~~-Sll~-vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~ 244 (512)
.|+.|-+ ..-.+ |.-+ .+...-+-+..+.++..++|.+.||++-|+++...-++-.+. . .+..+. .
T Consensus 46 s~a~p~L-~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~---t-~L~~fa-------~ 113 (511)
T TIGR00806 46 SFITPYL-LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCV---W-LLLLLG-------T 113 (511)
T ss_pred HHHHHHH-HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH---H-HHHHHH-------H
Confidence 3555633 33556 7777 888888889999999999999999999999988776543221 1 111121 1
Q ss_pred CchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhH
Q 010361 245 SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTC 324 (512)
Q Consensus 245 ~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~ 324 (512)
+ ...+.++=+++|..+...- +....+- .|+|. ++..++++..+....++.++||++++++.+ ++....
T Consensus 114 S--l~~L~i~R~llGvaEA~~~-A~~syI~-~WfP~-------kER~ratsi~~sg~~vG~~Ia~~L~qll~s-~gWr~y 181 (511)
T TIGR00806 114 S--VWHMQLMEVFYSVTMAARI-AYSSYIF-SLVPP-------SRYQRAAAYSRAAVLLGVFLSSVLGQLLVT-LGWISY 181 (511)
T ss_pred H--HHHHHHHHHHHHHHHHHHH-HHHHHHH-HHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchhH
Confidence 1 2334555567788777766 5554443 47653 379999999999999999999999999554 554332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccc-cccccccc-c-cCC-CC---CCC-CCC-CCcchhHHhHHHHHHhHhhhhc
Q 010361 325 LKFAAGLIMWSLPVMIILTWFTNKISSGV-LDRAKCSQ-S-CCR-TS---NEG-PVP-DADNIVDVGIEAIKLGWKEYMQ 395 (512)
Q Consensus 325 i~~~~~~~~~s~~s~~ll~~~i~rv~~~~-l~~~~~~~-~-~~~-~~---~~~-~~~-~~~~~~~~~~~~i~eG~~~y~~ 395 (512)
.-.+. +.+.+....++..+++.++.+.. .+++++.+ . .++ +. +++ ... ..+....+.++.+...++.-++
T Consensus 182 ~~Ln~-Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ 260 (511)
T TIGR00806 182 STLNI-ISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYR 260 (511)
T ss_pred HHHHH-HHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhc
Confidence 22221 11222222222122222221000 00110000 0 000 00 000 000 0111222445566666777677
Q ss_pred Cc-chhHHHHHHHHHHHhhhhhhHHHHHHHHH--hCCC---cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010361 396 QP-VLPASLAYVLLCLNVVLTPGSLMTAFLTQ--RGLN---PSIIGGFSGLCASMGVAATFLSAYLVR 457 (512)
Q Consensus 396 qp-vl~asla~alL~~tvll~~~~l~v~yl~~--lGls---~~~iG~~~g~gavgGLlGt~lap~L~r 457 (512)
+| ++.-++-.++-... + .+.+.|.+. ..+. +..=|...++.-+.|-+++++++.+..
T Consensus 261 n~~vl~WSlWwa~a~~g----~-~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~ 323 (511)
T TIGR00806 261 NPQLLLWSLWWVFNSAG----Y-YLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNI 323 (511)
T ss_pred CcchhhhhHHHHHHhhH----H-HHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 77 55556554332221 1 234444432 1222 235577777777777777888888743
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.13 E-value=0.0052 Score=67.39 Aligned_cols=133 Identities=16% Similarity=0.071 Sum_probs=77.0
Q ss_pred HcC-ChhHHHHHHHHHHHHHHHccccceeeec----ccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----ccc-CCCc
Q 010361 177 LHP-SLLPVAVMGFFSKLILIVGGPLVGKLMD----HSPRIPAYICLNTVQAAAQLLSAAMIIHAHTV----IPT-SSSM 246 (512)
Q Consensus 177 l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvD----R~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~----~~~-~~~~ 246 (512)
..+ +...++....+..+..++..|.+|.+.| |++|||.++..-..-.+ ++..++.+.... ... +.+.
T Consensus 33 ~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~---~~l~ll~~~~~~~~~~~~~~~~~~ 109 (477)
T TIGR01301 33 ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA---FAVILIGFAADIGHLFGDNLDKKT 109 (477)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH---HHHHHHHhCchhhhhccccccccc
Confidence 345 8888999999999999999999999999 59999988765322111 121121121000 000 0000
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 010361 247 LLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGIL 315 (512)
Q Consensus 247 l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL 315 (512)
..+.+...++.+. +..++....+... |..++-+++++ +++...+|+.....-.+..++|+.+||.+
T Consensus 110 ~~~~i~~~~i~~~-lld~~~n~~~~p~-rALiaDl~p~~-~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 110 KPRAIIVFVVGFW-ILDVANNMLQGPC-RAFLADLTGGD-ARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred hhHHHHHHHHHHH-HHHHHHHHHHHHH-HHhcccccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011111111111 1122333333333 34455577764 22456899999999999999999999986
No 97
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.12 E-value=0.00054 Score=73.38 Aligned_cols=102 Identities=18% Similarity=0.186 Sum_probs=73.3
Q ss_pred hHHhHHHHHHhHhhhhcCcchhH-HHHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 010361 379 VDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLV 456 (512)
Q Consensus 379 ~~~~~~~i~eG~~~y~~qpvl~a-sla~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~ 456 (512)
..+.+++.++-++..++|+-+.. +++. ++|.-.+-..-+..+.|.+ ..|++...++++.....+.+++|++++|++.
T Consensus 234 l~~g~k~L~~t~k~i~~~~~i~~FLiA~-~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld 312 (438)
T COG2270 234 LRNGFKELKSTFKEIRGRKNLVLFLIAR-FFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLD 312 (438)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHH-HHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777788888888884433 3333 3332111223356788988 5899999999999999999999999999999
Q ss_pred HhhChhhHHHHHHHHHHHHHHHHHHHHh
Q 010361 457 RRLGILKAGAAGLIFQASLLAMAVAVYW 484 (512)
Q Consensus 457 rRlG~~ragl~~l~~Q~~~L~~~v~~f~ 484 (512)
+|+|..+....++. .....|+..+.
T Consensus 313 ~rfg~k~vl~~~lv---i~~~~~~~~~~ 337 (438)
T COG2270 313 ERFGSKPVLMIGLV---ILSIAALYLIF 337 (438)
T ss_pred HHhCCceeehHHHH---HHHHHHHHHHH
Confidence 99999988777764 22344555444
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.09 E-value=0.0018 Score=69.28 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=57.9
Q ss_pred hhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhC-CCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHH
Q 010361 392 EYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRG-LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 470 (512)
Q Consensus 392 ~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lG-ls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~ 470 (512)
.++|+|.++.-+..+++....-..+.+....|+++.| .+....|...+++.+.++.-=+..+++.||+|..+..+.+..
T Consensus 202 ~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~ 281 (400)
T PF03825_consen 202 KLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALV 281 (400)
T ss_pred HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4678886655444443332211335556778888887 889999999999999999999999999999997776555443
No 99
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.05 E-value=0.0045 Score=66.20 Aligned_cols=253 Identities=16% Similarity=0.214 Sum_probs=141.0
Q ss_pred ccccceeeecccC-----ChhHHHHH-HHHHHHHHHHHHHHHHHHHhh--cccC-CCchhHHHHH-HHHHHHHHHHHHhH
Q 010361 198 GGPLVGKLMDHSP-----RIPAYICL-NTVQAAAQLLSAAMIIHAHTV--IPTS-SSMLLHPWFF-VLVLAGAVERLTGV 267 (512)
Q Consensus 198 ~gp~aG~lvDR~~-----Rr~vmi~~-dlvq~~~v~ls~~li~~~~~~--~~~~-~~~l~~~l~~-v~~llg~i~~l~sv 267 (512)
+-++.|...|+++ ||.-.+.. .+.+.....+. +...+.+.. .... ..+....+.. +..+.|..-...++
T Consensus 30 ~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~a-p~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T 108 (403)
T PF03209_consen 30 LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIA-PFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT 108 (403)
T ss_pred HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHH-HHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence 5789999999999 88755543 23333211111 111111111 0101 1111111111 12245555566666
Q ss_pred hhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010361 268 ALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTN 347 (512)
Q Consensus 268 a~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~ 347 (512)
++-. .-.| ++++ ++..++-+.+-..-.+.-+++..+.|.++.-+++..-+.+ ++...+....+-...+.
T Consensus 109 ~~lA-Ll~D----~~~e---~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v---~~~~a~i~~~l~~ia~w 177 (403)
T PF03209_consen 109 SFLA-LLAD----LAPE---ERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQV---IQGVALIALLLNLIALW 177 (403)
T ss_pred HHHH-HHHh----cCCH---hhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 5543 3345 5554 3677888888777778888888888888877776443322 22222222222223334
Q ss_pred hhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-
Q 010361 348 KISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ- 426 (512)
Q Consensus 348 rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~- 426 (512)
++.++ .++..+. .++++ ...++-|+.++++|--+.-+.+.++...-+..-|.++=+|.-+
T Consensus 178 g~E~r---~~~~~~~-------~~~~~---------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~V 238 (403)
T PF03209_consen 178 GQEPR---RSRRAAA-------AERPR---------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEV 238 (403)
T ss_pred hcccC---CcccccC-------CCCCC---------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHH
Confidence 43111 1111000 00111 1245677888888866665554443332223456677778876
Q ss_pred hCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HhhChhhHHHHHHHHHHHHHHHHHH
Q 010361 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLV-RRLGILKAGAAGLIFQASLLAMAVA 481 (512)
Q Consensus 427 lGls~~~iG~~~g~gavgGLlGt~lap~L~-rRlG~~ragl~~l~~Q~~~L~~~v~ 481 (512)
.|++..+---+.+.-+.|.++|=.+++++. +|.+..|+..++...-..|+..-+.
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~ 294 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL 294 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999998888888865 4888888877777766666544333
No 100
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.02 E-value=0.00053 Score=70.05 Aligned_cols=157 Identities=15% Similarity=0.002 Sum_probs=97.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++++++.++...++...+........|.++....+ +....+..........++..+..|.+.||++||+++....++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 276 (375)
T TIGR00899 197 ASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGV 276 (375)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHH
Confidence 56678888877777666666667778888877777 77777776666566667778899999999999998876544321
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ ...... ... + .+.+++..++.+.......+.....++ + +.++ +..++++.......+
T Consensus 277 ~------~~~~~~--~~~---~--~~~~~~~~~~~g~~~g~~~~~~~~~~~-~----~~~~----~~~~~~~~~~~~~~~ 334 (375)
T TIGR00899 277 A------FYTGLA--ADN---S--LWALLMLQLLNAIFIGILAGIGMLYFQ-D----LMPG----RAGAATTLYTNTGRV 334 (375)
T ss_pred H------HHHHHH--HHH---H--HHHHHHHHHHHHHHHHHHHHHHHHHHH-H----hCcc----hhhHHHHHHHHHHHH
Confidence 1 111111 110 1 112222222333332332222222221 2 3333 445888988888889
Q ss_pred HHHHhHHHHHHHHhhcchhh
Q 010361 304 CEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~ 323 (512)
...+||.++|.+.+..+...
T Consensus 335 g~~~g~~~~g~~~~~~g~~~ 354 (375)
T TIGR00899 335 GWIIAGSVGGILAERWSYHA 354 (375)
T ss_pred HHHHHHHHHHHHHHhccchh
Confidence 99999999999998776443
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.95 E-value=0.03 Score=61.71 Aligned_cols=162 Identities=10% Similarity=-0.083 Sum_probs=100.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc-CChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS-PRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~-~Rr~vmi~~dlvq 222 (512)
|++.++.++.-+....++......-+|+|+....+ +...++.+.....+...+..+++|.+.||+ +|||++...-++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 78888888888888888888888889999888777 777777776666777778888999999999 9999987776654
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+. ..+ .. ... .. ...+++.+.+..+...++..... ++-.+ +.++++ .+..++-+.....-.
T Consensus 87 ~lg----~ll--l~--~~~--~~--~~~~~l~l~li~iG~G~~~~~~~-alv~e----lfp~~~-~~R~sgf~i~Y~~~n 148 (493)
T PRK15462 87 AIG----HVV--LG--ASE--IH--PSFLYLSLAIIVCGYGLFKSNVS-CLLGE----LYEPTD-PRRDGGFSLMYAAGN 148 (493)
T ss_pred HHH----HHH--HH--Hhh--cc--hhHHHHHHHHHHHhcccccccHH-HHHHH----HCCCCC-ccccceehHHHHHHH
Confidence 332 111 11 110 00 01122222122222222222111 22123 333321 145556666666666
Q ss_pred HHHHHhHHHHHHHHhhcchhhH
Q 010361 303 LCEIAGASLFGILLSKYEPVTC 324 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s~~~~ 324 (512)
+...+||.++|.+....|.+.+
T Consensus 149 lG~~iap~l~g~L~~~~Gw~~~ 170 (493)
T PRK15462 149 VGSIIAPIACGYAQEEYSWAMG 170 (493)
T ss_pred HHHHHHHHHHHHHHhhhChHHH
Confidence 7889999999999876664443
No 102
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.89 E-value=4.6e-05 Score=82.12 Aligned_cols=112 Identities=12% Similarity=0.019 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALL---HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l---~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
..+...--.+.++=+++.++++|=..-.+ ++ +.-.-++.+.+..+.+.+++|+.|.+.||+||+++|.....+=..
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 34444555677788899999999876554 34 788889999999999999999999999999999999887755433
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhh
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAV 273 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iav 273 (512)
++.++... - ..|.+.+.=.+.|..|.-+.+..+.-|
T Consensus 111 Av~~~~fs-~------------~Fwq~~l~R~~vGiGeAs~~~ia~s~I 146 (493)
T KOG1330|consen 111 AVFASGFS-N------------HFWQVLLCRGFVGIGEASYSPIAPSLI 146 (493)
T ss_pred HHHHHHHH-H------------HHHHHHHHHHHhccchhhhcccchhHh
Confidence 32222111 0 012222222356777777777665544
No 103
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.85 E-value=0.0018 Score=69.82 Aligned_cols=277 Identities=19% Similarity=0.151 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccC-----ChhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010361 165 LWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSP-----RIPAYICLNTVQAAAQLLSAAMIIHAHT 238 (512)
Q Consensus 165 i~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~-----Rr~vmi~~dlvq~~~v~ls~~li~~~~~ 238 (512)
+...+..-++-+-.+ ++-+.+.+.....+||.+ -|+.|.+.|.++ ||+-|+.+-++..+ + .+.++.
T Consensus 7 l~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~----~--~~~~~~- 78 (433)
T PF03092_consen 7 LSRLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAV----S--ALVLAL- 78 (433)
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHH----H--HHHHHh-
Confidence 344455555556667 999999999999999976 899999999996 55555555444322 1 111111
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhh
Q 010361 239 VIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK 318 (512)
Q Consensus 239 ~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~ 318 (512)
.+....+. ....+.+++......++|++.+.-+ +..+.++ ++.-.+..+.......+..++|-.++|.+...
T Consensus 79 ~~~~~~s~--~~~~~~l~la~~g~a~~DV~aDa~v-----vE~~~~~-p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~ 150 (433)
T PF03092_consen 79 LPASESSA--AIAVVLLFLASFGYAFADVAADALV-----VELARRE-PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS 150 (433)
T ss_pred cccccchh--hhHHHHHHHHHHHHHHHHHhhhHHH-----HHHhhcC-CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 11111121 1122233334444556666554322 1123333 22233455666677777888899999999888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcc
Q 010361 319 YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV 398 (512)
Q Consensus 319 ~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpv 398 (512)
.++.....+........++..+ ++ . +| +++++.. +... . ++++. ........+.+++-|+.+.+..+
T Consensus 151 ~~~~~~f~i~~~~~~l~~~~~~---~~-~----~e-~~~~~~~-~~~~-~-~~~~~-~~~~~~~~~~~~~l~~~~~~~~i 217 (433)
T PF03092_consen 151 FGPQGVFLISAALPLLMLIVAL---FL-L----EE-RKVRPAD-EVFS-F-GKEEV-PCLFGSFREQLSELWRALQQRAI 217 (433)
T ss_pred CCCeEEehHHHHHHHHHHHHHH---Hh-h----hh-ccccccc-hhhc-c-ccccc-chhhHHHHHHHHHHHHHHhhhHH
Confidence 7765544332222121111111 11 1 11 1111100 0000 0 00000 11112234455555555545446
Q ss_pred hhHHH-HHHHHHHHhhhhhhHHHHHHHH-HhC---CCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHH
Q 010361 399 LPASL-AYVLLCLNVVLTPGSLMTAFLT-QRG---LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF 471 (512)
Q Consensus 399 l~asl-a~alL~~tvll~~~~l~v~yl~-~lG---ls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~ 471 (512)
+++.+ ...+.+++. ..-++.+..|.. ..+ +++..+|.+..++++++++|.+++.+..++....+...+....
T Consensus 218 ~~~~~~~~~~~~~~~-~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~ 294 (433)
T PF03092_consen 218 WQPILFFIFFFNLPP-SISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLV 294 (433)
T ss_pred HHHHHHHHHHHHhcc-CCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 66654 222222221 111121112222 356 9999999999999999999999999999988877776555443
No 104
>PRK10504 putative transporter; Provisional
Probab=97.85 E-value=0.00035 Score=74.66 Aligned_cols=158 Identities=16% Similarity=0.074 Sum_probs=109.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.+....++...+..+..+-.|.|.....+ +....++......+..++..+..|.+.||++||++++.+-++-.
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~ 338 (471)
T PRK10504 259 RTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLA 338 (471)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 67889999999999999998888999999887667 88888888887778888888999999999999999877654322
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ .+.+ .. .... .+. .+.+.+..++.|....+.....+..+.. .+++ +....+++.......+
T Consensus 339 ~----~~~~--~~-~~~~--~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~---~~~g~~~~~~~~~~~~ 400 (471)
T PRK10504 339 L----VSLL--FM-LVAL--LGW-YYLLPFVLFLQGMVNSTRFSSMNTLTLK-----DLPD---NLASSGNSLLSMIMQL 400 (471)
T ss_pred H----HHHH--HH-hccc--ccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCH---HhccchHHHHHHHHHH
Confidence 1 1111 11 1111 111 1111222334444444444444433322 4443 3678889999999999
Q ss_pred HHHHhHHHHHHHHhhcc
Q 010361 304 CEIAGASLFGILLSKYE 320 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s 320 (512)
...+||.++|.+++..+
T Consensus 401 g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 401 SMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988765
No 105
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.78 E-value=0.00065 Score=73.17 Aligned_cols=156 Identities=12% Similarity=0.047 Sum_probs=94.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc--CChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS--PRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~--~Rr~vmi~~dlv 221 (512)
++++++.+..+.++..++......-+|.|+.+. + +...++.+.....+..++..+.+|.+.||. ++++.....-..
T Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 317 (455)
T TIGR00892 239 THRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDK-GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFAL 317 (455)
T ss_pred cCchHHHHHHHHHHHHHHccchHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHH
Confidence 567788877877877777666666677777664 5 888888888888888889999999999984 333322211100
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
. ......+.. ... .+ .+.+++..++.|.......+.....+ .| .+++ ++..++++.+....
T Consensus 318 --~--~~~l~~ll~--~~~---~~--~~~~~i~~~~~G~~~g~~~~~~~~~~-~~----~~~~---~~~g~~~g~~~~~~ 378 (455)
T TIGR00892 318 --L--FNGLTHLLC--ALA---GD--YTGLVIYCIFFGLSFGSVGALLFEVL-MD----LVGA---QRFSSAVGLVTIVE 378 (455)
T ss_pred --H--HHHHHHHHH--HHh---ch--HHHHHHHHHHHHHHhchHHHHHHHHH-HH----HhhH---HHHhhHHhHHHHHH
Confidence 0 001111111 111 11 12233334444443333222222111 12 4444 37889999999999
Q ss_pred HHHHHHhHHHHHHHHhhcc
Q 010361 302 LLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~~s 320 (512)
.++.++||.++|.+....+
T Consensus 379 ~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 379 CCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHHHHccccceeeeehhcC
Confidence 9999999999999987654
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.78 E-value=0.0056 Score=62.90 Aligned_cols=82 Identities=13% Similarity=0.168 Sum_probs=60.7
Q ss_pred hhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH---hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHH
Q 010361 393 YMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (512)
Q Consensus 393 y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~---lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l 469 (512)
.+++|.+.-.+..-++|...-.+..+-+..|+.+ .|+++.+.|...+....+..+|.++.+++.+|+|..|...++.
T Consensus 136 ~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~ 215 (310)
T TIGR01272 136 AFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA 215 (310)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 3455544444444455553323566678889874 4999999999999999999999999999999999988877666
Q ss_pred HHHHH
Q 010361 470 IFQAS 474 (512)
Q Consensus 470 ~~Q~~ 474 (512)
....+
T Consensus 216 ~l~~~ 220 (310)
T TIGR01272 216 FLAVL 220 (310)
T ss_pred HHHHH
Confidence 54444
No 107
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.75 E-value=0.0013 Score=66.37 Aligned_cols=160 Identities=16% Similarity=0.097 Sum_probs=101.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChh--HHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIP--AYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~--vmi~~dlv 221 (512)
+++.++.+....++...+......-.|.++....+ +....+.+.....+..++..+..|.+.||.+||+ ........
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 292 (399)
T TIGR00893 213 KDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTA 292 (399)
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH
Confidence 55678888899999999999999899999988777 8888888888888888999999999999999886 22221111
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
-... .+. .+..+ .... .. ...+.+....++.......+..... +....++ ++..++++....+.
T Consensus 293 ~~~~-~~~-~~~~~--~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~g~~~~~~~~~~ 356 (399)
T TIGR00893 293 IIAG-LVL-SLLMF--ATNY--VN--IPYAALALVALGFFGLGAGAIGWAL-----ISDNAPG---NIAGLTGGLINSLG 356 (399)
T ss_pred HHHH-HHH-HHHHH--Hhcc--ch--hHHHHHHHHHHHHhchhhhhHHHHH-----HHhhcCh---hHHHHHHHHHHHHH
Confidence 0000 001 11011 1110 01 1111222222222211112222211 1224444 37889999999999
Q ss_pred HHHHHHhHHHHHHHHhhcc
Q 010361 302 LLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~~s 320 (512)
.++..+||.++|.+....+
T Consensus 357 ~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 357 NLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred HHhhhhhhHHhhhhccCCC
Confidence 9999999999999988766
No 108
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.72 E-value=0.04 Score=59.16 Aligned_cols=275 Identities=15% Similarity=0.080 Sum_probs=157.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAI--ALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~--~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
++...+.||.+-..-..+=.+|..--|+-. ..-++ |.-+.+++...-.+...++=.+-|.+.||++-|++.+.+-++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 344567789998888889899987666554 34455 899999998888888888899999999999988877766543
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
- ..+++...+.... .+ .+.+++..+++|....-|.+.... + ..|-|. +++-.=.-.|+.=+.--
T Consensus 89 ~------~IP~~~~~~a~~~--~~--~~~ll~~gll~G~~GasFav~m~~-~-s~~fP~----~~qG~AlGI~g~GN~G~ 152 (417)
T COG2223 89 L------LIPCLGLAFAVTY--PS--TWQLLVIGLLLGLAGASFAVGMPN-A-SFFFPK----EKQGLALGIAGAGNLGV 152 (417)
T ss_pred H------HHHHHHHHHHccC--Cc--hHHHHHHHHHHhcccceehccccc-c-cccCCh----hhhhHHHHHhccccccH
Confidence 2 2233222222211 22 145566666677666655554322 1 234333 32211223344333345
Q ss_pred HHHHHHhHHHHHHHHh--hcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchh
Q 010361 302 LLCEIAGASLFGILLS--KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIV 379 (512)
Q Consensus 302 l~~kilGP~lgGlL~s--~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (512)
.++++++|.+...... +. .. ..+.+.-.+...+..+...+ ..++. |+ ..
T Consensus 153 av~q~~~P~v~~~~g~~~w~---~~----~~i~~~~l~v~~v~~~~~~~---d~p~~-r~--------------~~---- 203 (417)
T COG2223 153 AVAQLVAPLVAVAFGFLAWR---NV----AGIYVVALAIAAVLAWLGMN---DVPEH-RA--------------SV---- 203 (417)
T ss_pred HHHHHHHHHHHHHHhhHHHH---HH----HHHHHHHHHHHHHHHHHHhC---CChhh-hc--------------cc----
Confidence 6688999998876542 21 11 11111111121221122111 11110 10 00
Q ss_pred HHhHHHHHHhHhhhhcCc-chhHHHHHHHHHHHhh---hhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 010361 380 DVGIEAIKLGWKEYMQQP-VLPASLAYVLLCLNVV---LTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAY 454 (512)
Q Consensus 380 ~~~~~~i~eG~~~y~~qp-vl~asla~alL~~tvl---l~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~ 454 (512)
+..+. +-++-.+++| +++-+ ++|+..+ .+++..+..|+++ -|+++..-|.+-..+..-|.+.=-+.++
T Consensus 204 ~~~~~---~~~~~v~~~~~~W~ls----llY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~ 276 (417)
T COG2223 204 KPQLP---AQLKAVFSNKDTWLLS----LLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGW 276 (417)
T ss_pred cccch---hHHHHHhcCcchHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccch
Confidence 00010 2234455555 44333 3443221 3466677778875 5999999998877777777777777888
Q ss_pred HHHhhChhhHHHHHHHH
Q 010361 455 LVRRLGILKAGAAGLIF 471 (512)
Q Consensus 455 L~rRlG~~ragl~~l~~ 471 (512)
+..|+|-.|..++..+.
T Consensus 277 LsDR~Gg~rv~~~~f~~ 293 (417)
T COG2223 277 LSDRIGGRRVTLAVFVG 293 (417)
T ss_pred hhhhccchhHHHHHHHH
Confidence 99999999998776653
No 109
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.70 E-value=0.0012 Score=66.46 Aligned_cols=155 Identities=15% Similarity=0.024 Sum_probs=106.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWN-FAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~-FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
+++.++.+....++..+...... ...|.+.....+ +....+.+.....+..++.++..|.+.||.+||+++..+-+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 287 (365)
T TIGR00900 208 KNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVI 287 (365)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHH
Confidence 56778877777777776665554 778888887667 8888888888888888999999999999999999877654322
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+ .+.+ .. ... .+ .+..++..++.+.......+.....+.+ .+++ ++..++++....+..
T Consensus 288 ~~----~~~~--~~--~~~--~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~---~~~g~~~~~~~~~~~ 347 (365)
T TIGR00900 288 GL----AILV--VG--LTP--PN--FPLFLVLWFAIGVGYGPINVPQGTLLQR-----RVPA---ELLGRVFGAQFSLSH 347 (365)
T ss_pred HH----HHHH--HH--hhc--hh--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCH---HHHHHHHHHHHHHHH
Confidence 11 1111 11 111 11 1223444455566555555444433322 4544 378999999999999
Q ss_pred HHHHHhHHHHHHHHhhc
Q 010361 303 LCEIAGASLFGILLSKY 319 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~ 319 (512)
+...+||.++|.+...+
T Consensus 348 ~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 348 AAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999999998754
No 110
>PRK03545 putative arabinose transporter; Provisional
Probab=97.67 E-value=0.0033 Score=65.59 Aligned_cols=158 Identities=16% Similarity=0.042 Sum_probs=91.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.++...++-..+......-.|.++.+..+ |.-..+.+.....+..++..++.|.+.||.+||+++...-+. .
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~-~ 281 (390)
T PRK03545 203 RRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALL-L 281 (390)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH-H
Confidence 45566666655554444443322224445566556 777777777777788899999999999999987654433221 1
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ ...... ... .+ .+.+.+..++.|.......+..+..+.+ ..++ ...++++....+..+
T Consensus 282 ~------~~~~l~-~~~---~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~-----~~~~----~~~~~~g~~~~~~~~ 340 (390)
T PRK03545 282 V------CLLLLL-PAA---NS--EWHLSVLSIFWGIAIMCIGLAMQVKVLK-----LAPD----ATDVAMALFSGIFNI 340 (390)
T ss_pred H------HHHHHH-HHh---ch--HHHHHHHHHHHHHHHhcchHHHHHHHHH-----hCCC----cHHHHHHHHHHHHHH
Confidence 1 111111 111 11 1122233333344333333333332222 3332 567889999999999
Q ss_pred HHHHhHHHHHHHHhhcchhhH
Q 010361 304 CEIAGASLFGILLSKYEPVTC 324 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~ 324 (512)
...+||.++|.+...++....
T Consensus 341 g~~~G~~~~G~~~~~~g~~~~ 361 (390)
T PRK03545 341 GIGAGALLGNQVSLHLGLSSI 361 (390)
T ss_pred HHHHHHHHHHHHHhccChhHH
Confidence 999999999999998875443
No 111
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.65 E-value=0.0028 Score=66.70 Aligned_cols=157 Identities=11% Similarity=0.041 Sum_probs=96.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.+....++..... ..+.-.|.++....+ +....+.+.....+..++.+...|.+.||.++++.+..+-++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~ 300 (417)
T PRK10489 222 ASPVVGGIALLGGLLTMAS-AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSF 300 (417)
T ss_pred cChHHHHHHHHHHHHHHHH-hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHH
Confidence 4555555555555444332 345557888887666 77777777777777788888889999999877776665543321
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ .++.+. .. .+ .+..++..++.|.......+.....++ + .+++ +...++|+........
T Consensus 301 ~------~~~~~~--~~---~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~-~----~~p~---~~~g~~~g~~~~~~~~ 359 (417)
T PRK10489 301 L------AVGLFG--LM---PM--WILAVLCLALFGYLSAISSLLQYTLLQ-T----QTPD---EMLGRINGLWTAQNVT 359 (417)
T ss_pred H------HHHHHH--cc---ch--HHHHHHHHHHHHHHHHHHHHHHHHHHH-h----hCCH---HHHHHHHHHHHHHHhh
Confidence 1 111111 11 11 112233334445444444333332222 2 4443 3689999999999999
Q ss_pred HHHHhHHHHHHHHhhcchhh
Q 010361 304 CEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~ 323 (512)
+..+||.++|.+.+..+...
T Consensus 360 g~~~g~~l~G~l~~~~g~~~ 379 (417)
T PRK10489 360 GDAIGAALLGGLGAMMTPVA 379 (417)
T ss_pred hHhHHHHHHHHHHHHhchhh
Confidence 99999999999999887644
No 112
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.64 E-value=0.0022 Score=63.84 Aligned_cols=157 Identities=20% Similarity=0.022 Sum_probs=112.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChh-HHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIP-AYICLNTVQAA 224 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~-vmi~~dlvq~~ 224 (512)
+.++.+....++...+......-.|.+..+..+ +....+.......+..++..+..|.+.||.+||+ ++..+-++..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 254 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 567777888888888888888899999888867 8889999999999999999999999999999998 77766544322
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
...+ .. ... + .+..++..++.+.......+.....+. ...++ ++..+.++.......++
T Consensus 255 ----~~~~--~~-~~~----~--~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~ 313 (352)
T cd06174 255 ----GLLL--LA-LAP----S--LALLLVALLLLGFGLGFAFPALLTLAS-----ELAPP---EARGTASGLFNTFGSLG 313 (352)
T ss_pred ----HHHH--HH-Hhc----c--HHHHHHHHHHHHHHHhccchhHHHHHH-----hhcCH---HHHHHHHHHHHHHHHHH
Confidence 1111 11 111 1 122334444555555554444433332 24554 37899999999999999
Q ss_pred HHHhHHHHHHHHhhcchhhH
Q 010361 305 EIAGASLFGILLSKYEPVTC 324 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~~~ 324 (512)
..++|.++|.+....+....
T Consensus 314 ~~i~~~i~g~l~~~~~~~~~ 333 (352)
T cd06174 314 GALGPLLAGLLLDTGGYGGV 333 (352)
T ss_pred HHHHHHHHHHHhcccCcchH
Confidence 99999999999976665443
No 113
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.62 E-value=0.0046 Score=64.34 Aligned_cols=154 Identities=14% Similarity=-0.018 Sum_probs=91.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+++.++....+.+...........-+|.++....-+...++.+.....+..++...+.|.+.||++||+++..+.++..+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~ 277 (381)
T PRK03633 198 KLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVIL 277 (381)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHH
Confidence 45556665555555554444444557888876422777777776677777888899999999999999988776554322
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
.+.. .. .. ...+...++++.......+..+..+ ...+++ ++...+++.......++
T Consensus 278 ----~~~~--~~---~~-------~~~~~~~~l~g~~~~~~~p~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~lG 333 (381)
T PRK03633 278 ----GSIA--ML---SQ-------AAMAPALFILGAAGFTLYPVAMAWA-----CEKVEH---HELVAMNQALLLSYTVG 333 (381)
T ss_pred ----HHHH--Hh---hh-------HHHHHHHHHHHHHHHhHHHHHHHHH-----HccCCH---HHHHHHHHHHHHHHHHH
Confidence 1111 11 00 0111222233333222222222211 113333 25666777776677788
Q ss_pred HHHhHHHHHHHHhhcchh
Q 010361 305 EIAGASLFGILLSKYEPV 322 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~ 322 (512)
..+||.++|.+.+..+..
T Consensus 334 ~~igp~~~G~l~~~~g~~ 351 (381)
T PRK03633 334 SLLGPSFTAMLMQNYSDN 351 (381)
T ss_pred HHHHHHHHHHHHHHhCcc
Confidence 999999999999877643
No 114
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.62 E-value=0.0016 Score=65.76 Aligned_cols=159 Identities=15% Similarity=0.014 Sum_probs=92.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+++.++.++...++..+.......-.+.+.....-+....+.+.....+..++..+..|.+.||++||+.+..+-++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 203 RTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAV 282 (377)
T ss_pred cCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 56677777777766665554444334445433222666677777777888888999999999999999988776554322
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
. ..+ .. .... .. ....+...++.+.............+ .| ..++ ++..++++.......+.
T Consensus 283 ~----~~~--~~-~~~~--~~--~~~~~~~~~~~g~~~g~~~~~~~~~~-~~----~~~~---~~~~~~~g~~~~~~~~g 343 (377)
T TIGR00890 283 G----MAA--ML-FIPM--LN--DVLFLATVALVFFTWGGTISLFPSLV-SD----IFGP---ANSAANYGFLYTAKAVA 343 (377)
T ss_pred H----HHH--HH-Hccc--ch--hHHHHHHHHHHHHHhccchhccHHHH-HH----Hhhh---hhhhhHhHHHHHHHHHH
Confidence 1 111 11 1110 11 11111222222222111111111111 12 3443 36788999999999999
Q ss_pred HHHhHHHHHHHHhhcchh
Q 010361 305 EIAGASLFGILLSKYEPV 322 (512)
Q Consensus 305 kilGP~lgGlL~s~~s~~ 322 (512)
..+||.++|.+.+..|..
T Consensus 344 ~~~~~~~~g~l~~~~g~~ 361 (377)
T TIGR00890 344 GIFGGLIASHALTEIGFE 361 (377)
T ss_pred HHHHHHHHHHHHhhhchh
Confidence 999999999998876643
No 115
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.60 E-value=0.0006 Score=72.64 Aligned_cols=232 Identities=13% Similarity=0.021 Sum_probs=130.3
Q ss_pred ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHH
Q 010361 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAG 259 (512)
Q Consensus 180 Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg 259 (512)
+-..+|++-.+-.+..++.+|+.|.+.||..+|--|+.--.+- ..+.++ |+ .+ .+ .+.++++=.+=|
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vm----f~sTil--Fa--fg---~s--y~~l~vAR~LQg 170 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVM----FLSTIL--FA--FG---NS--YPMLFVARSLQG 170 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHH----HHHHHH--HH--Hc---ch--hHHHHHHHHHhh
Confidence 3344566666778888999999999999999987776655432 223233 22 11 11 123343333334
Q ss_pred HHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHH
Q 010361 260 AVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVM 339 (512)
Q Consensus 260 ~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~ 339 (512)
.-+.+++++- .++-.| ..++| .+..++-+....--....++||++||.+|.+.|-..-..+-. ++.++..
T Consensus 171 vgsA~~~tsg-lamlAd----~f~~d--~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~---~v~Lld~ 240 (464)
T KOG3764|consen 171 VGSAFADTSG-LAMLAD----VFPED--NERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLA---IVLLLDG 240 (464)
T ss_pred hhHHHHHhhh-HHHHHH----Hcccc--hhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHH---HHHHHHH
Confidence 4444444433 344334 34443 234555555666666678999999999999887432111111 1222222
Q ss_pred HHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCc-chhHHHHHHHHHHHhhhhhhH
Q 010361 340 IILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQP-VLPASLAYVLLCLNVVLTPGS 418 (512)
Q Consensus 340 ~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qp-vl~asla~alL~~tvll~~~~ 418 (512)
.+.++. . +| .+.+++ +.++ ..++...+++| ++....+....+... ...+.
T Consensus 241 ~L~l~v-i---~p----~~~~~~--------~~~~------------~~~~~~Ll~dP~I~~~agai~~~n~~l-afLeP 291 (464)
T KOG3764|consen 241 ALQLLV-I---EP----TEMDPD--------STEQ------------GTPMWSLLMDPYILLIAGAITFSNSSL-AFLEP 291 (464)
T ss_pred HHHHhe-e---Cc----cccCcc--------cccc------------CccHHHHHhCchHhhhhcchhhccchH-HHhCc
Confidence 211111 1 11 111000 0001 11233445666 444444544455443 34555
Q ss_pred HHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 419 LMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 419 l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
....+..+ ...+.-.+|+..=-.++.-.+|+-+++.+.+|++..|
T Consensus 292 tlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~ 337 (464)
T KOG3764|consen 292 TLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR 337 (464)
T ss_pred ccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh
Confidence 66666654 5644449999999999999999999999999999776
No 116
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.60 E-value=0.0041 Score=64.51 Aligned_cols=158 Identities=11% Similarity=0.033 Sum_probs=91.7
Q ss_pred CCcchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCh----hHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHH
Q 010361 145 HPEGLYA-LYACCLAGNLVEQLWNFAWPSAIALLHPSL----LPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLN 219 (512)
Q Consensus 145 ~~r~f~~-L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sl----l~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~d 219 (512)
+++.+.+ +....++...+.....--+|.++....++. ...+.+..+..+..++..+..|.+.||++||+++...-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~ 295 (408)
T PRK09874 216 KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITAL 295 (408)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHH
Confidence 3344433 444445555666555556677776654421 22344444455667788899999999999999887765
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHH
Q 010361 220 TVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR 299 (512)
Q Consensus 220 lvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~ 299 (512)
++..+ .++.... .. + .+.+++..++.|.......+..+..+.+ ..++ ++..+..+....
T Consensus 296 ~~~~~------~~~~~~~-~~----~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~---~~~g~~~~~~~~ 354 (408)
T PRK09874 296 IFSVL------LLIPMSF-VQ----T--PLQLGILRFLLGAADGALLPAVQTLLVY-----NSSN---QIAGRIFSYNQS 354 (408)
T ss_pred HHHHH------HHHHHHH-hc----c--HHHHHHHHHHHHhhhHhhHHHHHHHHHH-----hCCc---ccceeeehHHHH
Confidence 43211 1111111 11 1 1223334444555555444444333322 2333 255677778888
Q ss_pred HHHHHHHHhHHHHHHHHhhcchhh
Q 010361 300 IDLLCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 300 Idl~~kilGP~lgGlL~s~~s~~~ 323 (512)
...++..+||.++|.+....+...
T Consensus 355 ~~~~g~~~gp~~~G~l~~~~g~~~ 378 (408)
T PRK09874 355 FRDIGNVTGPLMGAAISANYGFRA 378 (408)
T ss_pred HHHHHHHhhHHHHHHHHhhcchhH
Confidence 889999999999999988776543
No 117
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.57 E-value=0.0088 Score=62.89 Aligned_cols=160 Identities=10% Similarity=-0.074 Sum_probs=96.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHH-HHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYIC-LNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~-~dlvq 222 (512)
+++.++.+....++..++......-.|.++.. .+ +....+.+.....+..++..+..|.++||++||+.++. +-+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~ 298 (402)
T TIGR00897 220 TNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGC 298 (402)
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Confidence 56777777777777777777777778888755 56 76666666666677788999999999999998887642 21111
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
. +++..+.+...... .+ .+.+++..++.|.......+ .+..+ .+ + ++ ++..++.+..+....
T Consensus 299 ~----~~~~~l~~~~~~~~--~~--~~~~~~~~~~~G~~~~~~~~-~~~~~-~~----~-~~---~~~g~~~g~~~~~~~ 360 (402)
T TIGR00897 299 G----IFTLALYYIPQHFG--HS--FAVALIIAIALGIFLAGYVP-LAAVF-PT----L-AP---KHKGAAMSVLNLSAG 360 (402)
T ss_pred H----HHHHHHHHHHHccC--Cc--HHHHHHHHHHHHHHHHHHHH-HHHHH-Hh----h-Cc---chhHHHHHHHHHHHH
Confidence 1 11111111100000 11 11222333333433222222 22222 11 2 22 267889999999999
Q ss_pred HHHHHhHHHHHHHHhhcchhh
Q 010361 303 LCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s~~~ 323 (512)
+...+||.++|.++...|...
T Consensus 361 lg~~~gp~i~g~l~~~~g~~~ 381 (402)
T TIGR00897 361 LSAFLAPAIAVLFIGFFGAIG 381 (402)
T ss_pred HHHHHHHHHHHHHHhhcchHH
Confidence 999999999999999877443
No 118
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.52 E-value=0.0076 Score=63.09 Aligned_cols=160 Identities=13% Similarity=-0.052 Sum_probs=98.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.+.....+-.++-..|..-.|.++....+ +....+.+.....+..++.++..|.+.||++||+.+...-++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~ 292 (406)
T PRK15402 213 KNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMV 292 (406)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 66777777777666666656666667888777677 87777777666666777888999999999999998877654432
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+. ..+..+...... .. ...+++..++.+....+..+....... .+.+ ++..+.++.+.....+
T Consensus 293 ~g----~~~~~~~~~~~~--~~--~~~~~~~~~~~g~g~~~~~~~~~~~~~------~~~~---~~~g~~~~~~~~~~~~ 355 (406)
T PRK15402 293 AG----LLLAALATVISS--HA--YLWLTAGLSLYAFGIGLANAGLYRLTL------FSSD---VSKGTVSAAMGMLSML 355 (406)
T ss_pred HH----HHHHHHHHHccc--cc--HHHHHHHHHHHHHHHHHHhhhHHHHHh------hhcc---ccccHHHHHHHHHHHH
Confidence 21 111111100110 11 112233334444444433322221111 1222 2577888888888888
Q ss_pred HHHHhHHHHHHHHhhcch
Q 010361 304 CEIAGASLFGILLSKYEP 321 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~ 321 (512)
+..+||.++|.++...+.
T Consensus 356 ~~~~g~~~~~~l~~~~~~ 373 (406)
T PRK15402 356 IFTVGIELSKHAYLGGGN 373 (406)
T ss_pred HHHHHHHHHHhcccCCch
Confidence 899999999999886654
No 119
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.51 E-value=0.0022 Score=55.01 Aligned_cols=109 Identities=17% Similarity=0.074 Sum_probs=68.8
Q ss_pred HHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhh
Q 010361 192 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 271 (512)
Q Consensus 192 ~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~i 271 (512)
.+..++.+++.|.+.||++||+.+........+. .+.... .. + .+..++..++.+.......+....
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~------~~~~~~-~~----~--~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLS------TAMFAL-SS----N--ITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHH------HHHHHH-hc----c--HHHHHHHHHHHHHHHHHHHHhHHH
Confidence 4556788999999999999999988776543221 111111 11 1 122333344445444443333332
Q ss_pred hhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcch
Q 010361 272 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEP 321 (512)
Q Consensus 272 averdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~ 321 (512)
.+ ....++ ++..++++..+....+...+||.++|.+....+.
T Consensus 75 ~~-----~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 116 (141)
T TIGR00880 75 LI-----ADIYPP---EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGW 116 (141)
T ss_pred HH-----HHHCCh---hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccch
Confidence 22 224444 3788999999999999999999999999876654
No 120
>PRK03699 putative transporter; Provisional
Probab=97.49 E-value=0.0094 Score=62.42 Aligned_cols=157 Identities=8% Similarity=-0.014 Sum_probs=93.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 146 ~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
++.++.+..+.++-.++......-.|.|+.+..+ +....+.+.....+..++..+..|.+.||++||+++...-.+..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALV 283 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 3456667777777777766666678888888777 877778777777777788888999999999999987765543211
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHH-HHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVE-RLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~-~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
.+.+ +. .. .+. +.+.+..++.|... ..+........ + ..+++ -.+..+.+...-.+
T Consensus 284 ----~~~~--~~--~~---~~~--~~~~~~~~~~G~~~~~~~~~~~~~~~--~----~~~~~----~~~~~g~~~~~~~~ 340 (394)
T PRK03699 284 ----LMYL--FV--NT---DDP--SHLLYAILGLGFFSSAIYTTIITLGS--Q----QTKVA----SPKLVNFILTCGTI 340 (394)
T ss_pred ----HHHH--HH--Hc---CCc--hHHHHHHHHHHHHHHHHHHHHHHHHH--H----HccCC----CHHHHHHHHHhhhH
Confidence 1111 11 11 111 12222333334322 12222221111 1 22222 12334555556677
Q ss_pred HHHHhHHHHHHHHhhcchhhHH
Q 010361 304 CEIAGASLFGILLSKYEPVTCL 325 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~i 325 (512)
..++||.++|.+....|.....
T Consensus 341 g~~i~p~~~G~l~~~~g~~~~~ 362 (394)
T PRK03699 341 GTMLTFVVTSPIVAHFGLQAAL 362 (394)
T ss_pred HHHHHHHHHHHHHHHhCchhhh
Confidence 8999999999999887755443
No 121
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.46 E-value=0.0038 Score=63.40 Aligned_cols=155 Identities=15% Similarity=0.154 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ 227 (512)
+.......++...+......-+|.++....+ +....+.......+..++..+..|.+.||++||+.++..-.+..+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~--- 297 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAAL--- 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH---
Confidence 5666666677777777777778888877666 777778777777888889999999999999999977654432211
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHH-HHHHHHHHH
Q 010361 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVL-NRIDLLCEI 306 (512)
Q Consensus 228 ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l-~~Idl~~ki 306 (512)
....+ ... .... .+ .+..+...++.++.........+..+. | +.+++ +..++++.. .....++..
T Consensus 298 ~~~~~-~~~-~~~~--~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~-~----~~p~~---~~~~~~~~~~~~~~~~g~~ 363 (394)
T TIGR00883 298 LAVPL-LMA-LLDS--GS--FTLFFFLVLGLALIGGMYTGPMGSFLP-E----LFPTE---VRYTGASLAYNLAGAIFGG 363 (394)
T ss_pred HHHHH-HHH-HhcC--Cc--hHHHHHHHHHHHHHHHHHhhhHHHHHH-H----hCCcc---ceeeEeeehhHhHHHHHhh
Confidence 11111 111 1111 11 112222333344433333333332222 2 45442 455666653 334556778
Q ss_pred HhHHHHHHHHhhcc
Q 010361 307 AGASLFGILLSKYE 320 (512)
Q Consensus 307 lGP~lgGlL~s~~s 320 (512)
+||.++|.+.+..+
T Consensus 364 ~~p~~~g~l~~~~g 377 (394)
T TIGR00883 364 FAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999998776
No 122
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.43 E-value=0.0051 Score=65.45 Aligned_cols=157 Identities=12% Similarity=0.010 Sum_probs=104.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++++++......++..++......-+|.++....+ +....+.......+..++.++..|.+.||.+||+++...-++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~ 332 (485)
T TIGR00711 253 KYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYA 332 (485)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Confidence 56778887888888777777777888999988888 99999999888889999999999999999999998766543321
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ . .......... ..+ .+.++...++.|....+........... .+++ ++..++++.......+
T Consensus 333 ~----~--~~~~~~~~~~-~~~--~~~~~~~~~l~g~g~~~~~~~~~~~~~~-----~~~~---~~~g~~~~~~~~~~~~ 395 (485)
T TIGR00711 333 V----G--FYWRAFTFTP-DTP--FLAIALPQFIRGFGMGCFFMPLTTIALS-----GLPP---HKIARGSSLSNFTRQL 395 (485)
T ss_pred H----H--HHHHhccCCC-CCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCH---HHHhHHHHHHHHHHHH
Confidence 1 1 1111111111 111 1222333334444333333222222211 2333 4788999999999999
Q ss_pred HHHHhHHHHHHHHhh
Q 010361 304 CEIAGASLFGILLSK 318 (512)
Q Consensus 304 ~kilGP~lgGlL~s~ 318 (512)
+..+||.+.|.+++.
T Consensus 396 g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 396 GGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988774
No 123
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.43 E-value=0.0041 Score=67.66 Aligned_cols=156 Identities=17% Similarity=0.057 Sum_probs=104.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++|.+.......++...+-....+-+|.++....+ |+...+++.....+...+.++.+|.+.||++||+++...-++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~ 336 (495)
T PRK14995 257 THRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSA 336 (495)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 55667776777777777666677788888888888 99999999999999999999999999999999988765544321
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ ...+ ... ... ..+ .+.++...++.|..........+..+.. .+++ ++...+.+.......+
T Consensus 337 ~----~~~~--l~~-~~~-~~~--~~~~~~~~~l~G~g~g~~~~~~~~~~~~-----~~~~---~~~g~~~~~~~~~~~l 398 (495)
T PRK14995 337 L----SFYG--LAM-TDF-STQ--QWQAWGLMALLGFSAASALLASTSAIMA-----AAPP---EKAAAAGAIETMAYEL 398 (495)
T ss_pred H----HHHH--HHH-hcC-CCc--hHHHHHHHHHHHHhHHHHHHHHHHHHHh-----cCCH---HhcchHHHHHHHHHHH
Confidence 1 1111 111 111 111 1122333334444444444334443332 3333 3788899999999999
Q ss_pred HHHHhHHHHHHHHhh
Q 010361 304 CEIAGASLFGILLSK 318 (512)
Q Consensus 304 ~kilGP~lgGlL~s~ 318 (512)
...+|+.++|.+++.
T Consensus 399 G~~~G~ai~g~i~~~ 413 (495)
T PRK14995 399 GAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998774
No 124
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.38 E-value=0.03 Score=61.61 Aligned_cols=90 Identities=16% Similarity=0.177 Sum_probs=64.1
Q ss_pred hHhhhhcCcchhHHHHHHHHHHHhhhhhhHHH--HHH----HHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 389 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLM--TAF----LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 389 G~~~y~~qpvl~asla~alL~~tvll~~~~l~--v~y----l~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
.++.++++|-+|..+...+..... ..++++. ..| +++.|+++..--+.-...++--++.|++++++++|+|..
T Consensus 257 sl~~~~~~~~lR~~~~i~~~v~~~-qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR 335 (485)
T KOG0569|consen 257 SLRQLLKNPTLRRPLLIGIVVSFA-QQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR 335 (485)
T ss_pred cHHHHhcCcchhHHHHHHHHHHHH-HHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 578889999888764333222111 2233222 122 346799999988999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHH
Q 010361 463 KAGAAGLIFQASLLAMA 479 (512)
Q Consensus 463 ragl~~l~~Q~~~L~~~ 479 (512)
+..+.+.....++..+-
T Consensus 336 pLll~~~~~~~~~~~~~ 352 (485)
T KOG0569|consen 336 PLLLISLSLMAVALLLM 352 (485)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888887776666443
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.37 E-value=0.012 Score=61.56 Aligned_cols=153 Identities=14% Similarity=-0.040 Sum_probs=83.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
+....+....++.......+..-.|.++....+ +....+.+.....+..++..+..|.+.||++||+.+...-+.- +
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~-~- 293 (393)
T PRK15011 216 RDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAG-V- 293 (393)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH-H-
Confidence 333444344444444445555668888877667 7777777665555666777899999999999999776543221 1
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
..+.. .. ... + .+..++..++.+....+....... +-.+ +.++ +..++++....+-.+..
T Consensus 294 --~~~~~--~~-~~~----~--~~~~l~~~~l~~~~~g~~~~~~~~-~~~~----~~p~----~~g~~~~~~~~~~~lg~ 353 (393)
T PRK15011 294 --CFYAG--ML-MAH----S--PAILLGLQLLNAIYIGILGGIGML-YFQD----LMPG----QAGSATTLYTNTSRVGW 353 (393)
T ss_pred --HHHHH--HH-HHh----h--HHHHHHHHHHHHHHHHHHHHHHHH-HHHH----hCCC----CcchHHHHHHHHHHHHH
Confidence 11111 11 111 1 111111111122211121111111 1123 2332 34567777777778889
Q ss_pred HHhHHHHHHHHhhcch
Q 010361 306 IAGASLFGILLSKYEP 321 (512)
Q Consensus 306 ilGP~lgGlL~s~~s~ 321 (512)
.+||.++|.+...++.
T Consensus 354 ~~g~~l~G~i~~~~g~ 369 (393)
T PRK15011 354 IIAGSLAGIVAEIWNY 369 (393)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999887653
No 126
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.36 E-value=0.011 Score=61.58 Aligned_cols=162 Identities=14% Similarity=0.061 Sum_probs=95.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHH-HHccccceeeecccCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLIL-IVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~-ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
+++.++.+....++...++....--.+.++.+. + +.-.++.+........ ++.....|.++||+++|++++.+-++.
T Consensus 206 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~ 284 (390)
T TIGR02718 206 RRPLAWSLLALALLSAMTAVSGFGLSKLYLVDA-GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLA 284 (390)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhc-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 556677777788888887776666677888774 6 8888888766555444 444678999999999999887765443
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+. ..+ .+.......... ...++...++.+....+..+.....+.+ .++++ ++-.+..+..+.+..
T Consensus 285 ~~~----~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~--~~~g~~~~~~~~~~~ 350 (390)
T TIGR02718 285 GSL----ALL-WFAQAAFWLAPG--IAVAWSCSAFGSLITGITSVAIYTAFMR-----FAGDG--DQAGTDVTAVQSTRD 350 (390)
T ss_pred HHH----HHH-HHHHHHcccCCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCcc--cchHHHHHHHHHHHH
Confidence 221 111 111111000001 1111222222222223332322222222 12221 245667778888889
Q ss_pred HHHHHhHHHHHHHHhhcch
Q 010361 303 LCEIAGASLFGILLSKYEP 321 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s~ 321 (512)
+...+||.++|.++...|.
T Consensus 351 lg~~~g~~~~G~l~~~~G~ 369 (390)
T TIGR02718 351 LGELIASSIAGYLTDRFGY 369 (390)
T ss_pred HHHHHHHHHHHHHHHHHcc
Confidence 9999999999999997764
No 127
>TIGR00895 2A0115 benzoate transport.
Probab=97.36 E-value=0.0047 Score=62.96 Aligned_cols=147 Identities=18% Similarity=0.052 Sum_probs=92.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
+.+..++...++...+......-.|.+ ....+ +....+.+.....+..++..+..|.+.||++||+++...-+. .
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~-- 325 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLPKL-MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLG-A-- 325 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH-H--
Confidence 445566777777666666666667744 44445 777788888888888899999999999999998554433221 1
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
+.+.+ ... ... + .+..++..++.+.......+.....+. .++++ ++..++.+.+..+..+..
T Consensus 326 --~~~~~-~~~-~~~----~--~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~---~~~g~~~g~~~~~~~~g~ 387 (398)
T TIGR00895 326 --VFAVL-VGS-TLF----S--PTLLLLLGAIAGFFVNGGQSGLYALMA-----LFYPT---AIRATGVGWAIGIGRLGA 387 (398)
T ss_pred --HHHHH-HHH-Hhh----C--HHHHHHHHHHHHHHHHHHHHHHHHHHh-----hcCCH---HHHHHHHHHHHHHHHHHH
Confidence 11111 111 111 1 122333344455544444443333222 25554 378899999999999999
Q ss_pred HHhHHHHHHH
Q 010361 306 IAGASLFGIL 315 (512)
Q Consensus 306 ilGP~lgGlL 315 (512)
.+||.++|.+
T Consensus 388 ~~g~~~~G~l 397 (398)
T TIGR00895 388 IIGPILAGYL 397 (398)
T ss_pred HHHHHhHHhc
Confidence 9999999976
No 128
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.34 E-value=0.035 Score=57.88 Aligned_cols=78 Identities=13% Similarity=0.189 Sum_probs=54.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
+++.++.+++..++...+-..+..-.+.+.....+ +....+.+.....+..++..++.|.+.||.+||+++....++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~ 275 (382)
T PRK10091 197 RSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFII 275 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHH
Confidence 34455666665555554444443334445555566 8888888888888888999999999999999999887766543
No 129
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.34 E-value=0.022 Score=59.83 Aligned_cols=78 Identities=17% Similarity=0.055 Sum_probs=53.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHH-HHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFF-SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~-~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
+|+.++.+....++-..+......-.+.++....+ +...++.+... ..+..++.++..|.+.||++||+.+...-++.
T Consensus 207 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~ 286 (402)
T PRK11902 207 SRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQ 286 (402)
T ss_pred hCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 67778887777777666655433223334555566 87777777543 34557788899999999999999877665543
No 130
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.33 E-value=0.081 Score=57.98 Aligned_cols=247 Identities=15% Similarity=0.062 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHH
Q 010361 183 PVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVE 262 (512)
Q Consensus 183 ~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~ 262 (512)
+-+..--+...-.++-.-++|.++||++-|+++..+-++-+++ ..+..++...+ .+.++++=++-|..+
T Consensus 74 ~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~----t~l~P~aa~~~-------~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 74 EKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALL----TLLTPLAASIG-------FYLLLVLRFLQGLGQ 142 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHH----HHHHHHHHHhc-------chhhHHHHHHhHHHH
Confidence 3344444445556677788999999999999988887654432 12222321111 122334444566655
Q ss_pred HHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhh-cchhh-HHHHHHHHHHHHHHHHH
Q 010361 263 RLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVT-CLKFAAGLIMWSLPVMI 340 (512)
Q Consensus 263 ~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~-~s~~~-~i~~~~~~~~~s~~s~~ 340 (512)
...-++... +...|.|. + +-.+.=+.+..-.++..+++=+++|.|-+. +|.+. ...+.....++.+
T Consensus 143 g~~~pa~~~-i~~~W~P~---~----Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~---- 210 (466)
T KOG2532|consen 143 GVLFPAIGS-ILAKWAPP---N----ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFI---- 210 (466)
T ss_pred hHHHhhhhc-eeeeECCH---H----HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHH----
Confidence 555555543 44568776 2 466667777777788888888888888876 55432 1222211111211
Q ss_pred HHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHH
Q 010361 341 ILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLM 420 (512)
Q Consensus 341 ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~ 420 (512)
..+...+ .+|..++.-.++ +++--++++.+..... ...--|+-.+++|.+.+.....+.++..+..+...+
T Consensus 211 -~w~~~~~-d~P~~h~~is~~--El~~I~~~k~~~~~~~-----~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~ 281 (466)
T KOG2532|consen 211 -LWFLFYS-DSPSKHPNISEK--ELKYIEKGKSEAHVKK-----KPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYL 281 (466)
T ss_pred -HHHHHhc-CCcccCCCCCHH--HHHHHHhcccccccCC-----CCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111 112111100000 0000000000000000 012357778899988887665544433223344567
Q ss_pred HHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhCh
Q 010361 421 TAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (512)
Q Consensus 421 v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~ 461 (512)
+.|+++ +|++-..-|++.++=-+...+-.++++.+..|+-.
T Consensus 282 PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 282 PTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred hHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 889886 89999999999988777777766666666655543
No 131
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.29 E-value=0.012 Score=62.82 Aligned_cols=159 Identities=11% Similarity=0.020 Sum_probs=96.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------hhHHHHHHHHHHHHHHHccccceeeecccCChhHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPS--------LLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYI 216 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~S--------ll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi 216 (512)
+++.++.+....++....-.....=.|.++.+...+ .-.+++......+..++...++|.+.||.+||+++.
T Consensus 206 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~ 285 (418)
T TIGR00889 206 KNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVML 285 (418)
T ss_pred cCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 666777777777776554444444446666554322 244566667777788888999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHH
Q 010361 217 CLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAV 296 (512)
Q Consensus 217 ~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~ 296 (512)
.+-++..+ . ...+... .. .....+.+++..++.+....+..+.....+. + ..++ ++..++.+.
T Consensus 286 ~~~~~~~v----~--~~l~~~~-~~--~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~-~----~~p~---~~~g~~~g~ 348 (418)
T TIGR00889 286 LSLVAWAL----R--FGFFAYG-DP--EYFGYALLFLSMIVYGCAFDFFNISGSVFVE-K----EVPV---HIRASAQGL 348 (418)
T ss_pred HHHHHHHH----H--HHHHHHc-Cc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----HCCH---HHHHHHHHH
Confidence 87654322 1 1111111 11 0101122333444555555555444333232 2 3333 378889999
Q ss_pred HH-HHHHHHHHHhHHHHHHHHhhcc
Q 010361 297 LN-RIDLLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 297 l~-~Idl~~kilGP~lgGlL~s~~s 320 (512)
.. ....+..++||.++|.++...+
T Consensus 349 ~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 349 FTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 97 5677899999999999998754
No 132
>PRK10054 putative transporter; Provisional
Probab=97.26 E-value=0.0089 Score=63.02 Aligned_cols=158 Identities=11% Similarity=0.074 Sum_probs=91.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP---SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~---Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
+++.++.+....++..+.........+.+.....+ +...++.+-....+..+.+.++.|.+.||.++|+++...-++
T Consensus 204 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~ 283 (395)
T PRK10054 204 QDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLC 283 (395)
T ss_pred cCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHH
Confidence 67888888888888888877766677777655543 334445554444555566678899999999999877655433
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
..+ . .+.+... . ++ .+.+++..++.+..+....+..+..+.+ +++++ ...+.-+.. ..-
T Consensus 284 ~~~----~--~~~~~~~-~---~~--~~~~~~~~~~~~~g~~~~~p~~~~~~~~-----~~p~~---~~~~~~~~~-~~~ 342 (395)
T PRK10054 284 FVI----G--LVGFIFS-G---NS--LLLWGMSAAVFTVGEIIYAPGEYMLIDH-----IAPPG---MKASYFSAQ-SLG 342 (395)
T ss_pred HHH----H--HHHHHHc-c---hH--HHHHHHHHHHHHHHHHHHHhhHHHHHHH-----hCCcc---cceehHhHH-HHH
Confidence 221 1 1111111 0 11 1223444445555544444433322322 34432 222332221 233
Q ss_pred HHHHHHhHHHHHHHHhhcchhh
Q 010361 302 LLCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~~s~~~ 323 (512)
.+...+||.++|.++...++..
T Consensus 343 ~~G~~~Gp~~~G~l~~~~g~~~ 364 (395)
T PRK10054 343 WLGAAINPLVSGVILTTLPPWS 364 (395)
T ss_pred HHHHHHHHHHHHHHHHHcChhh
Confidence 3578999999999999887644
No 133
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.25 E-value=0.019 Score=61.82 Aligned_cols=153 Identities=14% Similarity=0.004 Sum_probs=97.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.++...++..........-.|.|+....+ |...++.+.....+..++..+..|.+.||++||+.+...-....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~ 335 (467)
T PRK09556 256 KNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALAL 335 (467)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 56678888888877777666666678999988888 88888888888888889999999999999999987655432211
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhh-hhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV-AVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~i-averdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
+ ...++.+ ... .+ ....++..+++|... ....... ....| ..++ +....+++..+..-.
T Consensus 336 ~----~~~~~~~--~~~---~~--~~~~~~~~~~~G~~~--~~~~~~~~~~~~~----~~p~---~~~g~a~gi~~~~g~ 395 (467)
T PRK09556 336 I----IFTLGVY--QHA---TS--EYMYLASLFALGFLV--FGPQLLIGVAAVG----FVPK---KAIGVANGIKGTFAY 395 (467)
T ss_pred H----HHHHHHH--Hhc---Cc--HHHHHHHHHHHHHHH--hhHHHHHHHHHHh----hcch---hhHHHHHHHHHHHHH
Confidence 1 1111111 111 11 112233344444221 1111100 11113 3343 368899999988877
Q ss_pred H-HHHHhHHHHHHHHh
Q 010361 303 L-CEIAGASLFGILLS 317 (512)
Q Consensus 303 ~-~kilGP~lgGlL~s 317 (512)
+ ...++|.+.|.+..
T Consensus 396 l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 396 LFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHhHHHHhhhHHHHhc
Confidence 6 67899999999988
No 134
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.25 E-value=0.012 Score=61.40 Aligned_cols=150 Identities=18% Similarity=0.070 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQL 227 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ 227 (512)
...++...++..........-.|.++.. .+ +....+.......+..++.+...|.+.||.+||+.++.+-+...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~--- 297 (406)
T PRK11551 222 TLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILA--- 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH---
Confidence 4455665555554444444446777765 35 777788888888888899999999999999999988765433211
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 228 ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
. ++.+. .. .+ .+.+++..++.+........... .+++..+++ ++..++++....+..+...+
T Consensus 298 -~--~~~~~-~~----~~--~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~p~---~~~g~~~g~~~~~~~~g~~~ 359 (406)
T PRK11551 298 -S--LAALA-AA----PS--FAGMLLAGFAAGLFVVGGQSVLY-----ALAPLFYPT---QVRGTGVGAAVAVGRLGSMA 359 (406)
T ss_pred -H--HHHHH-hc----Cc--HHHHHHHHHHHHHHHHhHHHHHH-----HHHHHHcch---hhhhhhhhHHHHhhhHHHHH
Confidence 1 11111 11 11 12223333333433222222222 122335554 36888999999999999999
Q ss_pred hHHHHHHHHhhcc
Q 010361 308 GASLFGILLSKYE 320 (512)
Q Consensus 308 GP~lgGlL~s~~s 320 (512)
||.++|.++...+
T Consensus 360 g~~~~g~l~~~~~ 372 (406)
T PRK11551 360 GPLLAGQLLALGR 372 (406)
T ss_pred HhhhHhhhhccCC
Confidence 9999999987644
No 135
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.22 E-value=0.029 Score=62.25 Aligned_cols=160 Identities=16% Similarity=0.112 Sum_probs=110.9
Q ss_pred CcchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 146 PEGLYALYA-CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 146 ~r~f~~L~~-g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++..+.+.. +-....++..++ --+|+++-...+ +....|++..+..+-.++-+...+.+-+|.++.+++..+-++.+
T Consensus 217 ~~~l~~~l~~~~~~~l~~~a~~-aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a 295 (524)
T PF05977_consen 217 SPPLRSVLLRSFLFNLFASAVW-ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFA 295 (524)
T ss_pred chHHHHHHHHHHHHHHhhhHHH-HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHH
Confidence 344444434 334444444444 347998887777 88888888888888889999999999999999888877765432
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+. ++.+. .. .+ .+..++.+++.|.......+..+..+|+ .+++ +.+.|.+|..+.+...
T Consensus 296 ~~------~~~la--l~---~~--~~~~~~~l~l~G~~~~~~~~~~~t~~Q~-----~~P~---~~~GRv~si~~~~~~g 354 (524)
T PF05977_consen 296 LA------LLLLA--LS---PS--FWLALIALFLAGAAWIIANSSLNTLVQL-----SVPD---WVRGRVFSIYQMVFFG 354 (524)
T ss_pred HH------HHHHh--cc---hH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCH---HHHhHHHHHHHHHHHH
Confidence 21 11111 11 11 1233445556777777777777777776 4554 4899999999999999
Q ss_pred HHHHhHHHHHHHHhhcchhhHHHH
Q 010361 304 CEIAGASLFGILLSKYEPVTCLKF 327 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~i~~ 327 (512)
+.-+|..++|.+...+|....+.+
T Consensus 355 ~~~lGsll~G~la~~~g~~~al~~ 378 (524)
T PF05977_consen 355 GMPLGSLLWGFLADHFGVRTALLI 378 (524)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHH
Confidence 999999999999999887665544
No 136
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.21 E-value=0.027 Score=58.77 Aligned_cols=155 Identities=6% Similarity=-0.072 Sum_probs=97.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+++.++.+....++...+......-.|.++.+..-+...+|.+.....+..++.....|++.||+++|+++..+-++..+
T Consensus 203 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 203 KEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVV 282 (382)
T ss_pred cChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 56777877777777777766555666778766333777788887788888899999999999999999998776543222
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH-HH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID-LL 303 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id-l~ 303 (512)
. .+... .. ++ .+.+++..++.|....++.+....-+.+ . ++ .+..++.+.....+ ..
T Consensus 283 ----~--~~~~~--~~---~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~-----~-~~---~~~~~~~~~~~~~~~~~ 340 (382)
T PRK11128 283 ----R--WGLMG--ST---TA--LPWLIVIQILHCGTFTVCHLAAMRYIAA-----R-PG---SEVIRLQALYSALAMGG 340 (382)
T ss_pred ----H--HHHHH--hh---hh--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----C-CH---hhhHHHHHHHHHHHHHH
Confidence 1 11111 11 11 1223334445565555555544433322 2 12 24566666665443 34
Q ss_pred HHHHhHHHHHHHHhhcch
Q 010361 304 CEIAGASLFGILLSKYEP 321 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~ 321 (512)
...+||.++|.++..++.
T Consensus 341 g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 341 SIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHhccH
Confidence 558999999999998764
No 137
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.21 E-value=0.0061 Score=65.39 Aligned_cols=137 Identities=14% Similarity=0.018 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 010361 167 NFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSS 245 (512)
Q Consensus 167 ~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~ 245 (512)
..-+|.++....+ +...++.+.....+..++.++..|.+.||++||+++..+.++..+. ... +. .... ..
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~----~~~-~~--~~~~--~~ 365 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLL----IIP-VF--AIGG--AN 365 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH----HHH-Hh--hccc--cH
Confidence 3456777765666 8888888888888889999999999999999999887765443221 111 11 1111 11
Q ss_pred chhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchh
Q 010361 246 MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPV 322 (512)
Q Consensus 246 ~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~ 322 (512)
.+...+..++.+............ ++....++ ++..++++....+..+...+||.++|.+...++..
T Consensus 366 --~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~ 432 (496)
T PRK03893 366 --VWVLGLLLFFQQMLGQGISGLLPK-----LIGGYFDT---EQRAAGLGFTYNVGALGGALAPILGALIAQRLDLG 432 (496)
T ss_pred --HHHHHHHHHHHHHHhcccchhhHH-----HHHhhCCH---HHhhcccchhhhhhhHHHHHHHHHHHHHhccCChH
Confidence 111111222222211111111111 12224443 37888999999999999999999999999877644
No 138
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.16 E-value=0.019 Score=61.47 Aligned_cols=158 Identities=15% Similarity=0.057 Sum_probs=91.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc--CChhHHHH-HHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS--PRIPAYIC-LNT 220 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~--~Rr~vmi~-~dl 220 (512)
+++.++.++...++..........-+|.|+....+ +...++.+.....+..++..+..|.+.||+ +||+.... .-.
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~ 330 (452)
T PRK11273 251 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMT 330 (452)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 45667777778777776666667788999988777 777788877777788888899999999998 44433221 111
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhh-hhhcccceeEecCCCchhHHHHHHHHHHH
Q 010361 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG-VAVERDWAVLLAGINRPIALAKANAVLNR 299 (512)
Q Consensus 221 vq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~-iaverdWVp~Lv~~~~~~~L~~aNs~l~~ 299 (512)
+ ..+.++.+. ... ... .+.+.+.+++.+.. ....... .++-.| .+++ +...++++....
T Consensus 331 l------~~~~~~~~~--~~~-~~~--~~~~~~~~~~~g~~--~~~~~~~~~~~~~~----~~p~---~~~g~~~g~~~~ 390 (452)
T PRK11273 331 L------VTIATIVYW--LNP-AGN--PTVDMACMIVIGFL--IYGPVMLIGLHALE----LAPK---KAAGTAAGFTGL 390 (452)
T ss_pred H------HHHHHHHHH--Hhc-ccC--hHHHHHHHHHHHHH--HHhHHHHHHHHHHH----HcCh---hhhhhHHHHHHH
Confidence 1 111111111 111 011 11112222223321 1111111 111112 3443 367888888888
Q ss_pred HHHHHH-HHhHHHHHHHHhhcchh
Q 010361 300 IDLLCE-IAGASLFGILLSKYEPV 322 (512)
Q Consensus 300 Idl~~k-ilGP~lgGlL~s~~s~~ 322 (512)
+..++. +.||.++|.+....|..
T Consensus 391 ~~~~g~~~~g~~v~g~l~~~~g~~ 414 (452)
T PRK11273 391 FGYLGGSVAASAIVGYTVDFFGWD 414 (452)
T ss_pred HHHHHHHHhhhhhHHHHHHHhcch
Confidence 777765 56899999999877643
No 139
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.11 E-value=0.019 Score=63.43 Aligned_cols=241 Identities=17% Similarity=0.107 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHH
Q 010361 184 VAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVER 263 (512)
Q Consensus 184 vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~ 263 (512)
-+....+-.+.++++-.+.|.+.||+|-.+.|..+.++-.+...+.+ + .. + .+.+.++=+++|.+|.
T Consensus 83 l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~----~---~~----s--~~~~ialr~llGl~es 149 (495)
T KOG2533|consen 83 LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTA----A---VH----S--FPGLIALRFLLGLFES 149 (495)
T ss_pred hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHH----H---Hh----h--hHHHHHHHHHHHHHhc
Confidence 45566667889999999999999999977777777754322111110 1 11 1 1234455568899888
Q ss_pred HHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHh------hcchhhHHHHHHHHHHHHHH
Q 010361 264 LTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS------KYEPVTCLKFAAGLIMWSLP 337 (512)
Q Consensus 264 l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s------~~s~~~~i~~~~~~~~~s~~ 337 (512)
..-++...-+. .|- ++ +++..-=+..-.-.++++++|.+++..++. ..|-..-..+.. +++++
T Consensus 150 ~~wP~~~~~lg-~wy----~~---~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G---~i~~~ 218 (495)
T KOG2533|consen 150 GGWPGVVAILG-NWY----GK---SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG---VITLV 218 (495)
T ss_pred ccchHHHHHHH-hhc----Ch---hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH---HHHHH
Confidence 88877654433 342 22 256655566666666777777777766543 112111111111 22222
Q ss_pred HHHHHHHHHHhhccccccccccccc------cCCCCCCCCCCCCcchhHHhHHHHHHhHhhhhcCcchhHH-HHHHHHHH
Q 010361 338 VMIILTWFTNKISSGVLDRAKCSQS------CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLLCL 410 (512)
Q Consensus 338 s~~ll~~~i~rv~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl~as-la~alL~~ 410 (512)
..++..+.+. .+|+-.+-.++++ ..++ +.+....++ --..+++.-+++|...+. +...+...
T Consensus 219 ~gi~~f~~lp--~~P~~~~fl~~~ek~~~~~~~~~--~~~~~~~~~-------~~~~~~~~a~~dp~vw~~~l~~~~~~l 287 (495)
T KOG2533|consen 219 LGIVVFFFLP--DNPSKAWFLTDEEKELVVERLRE--SPSGGIENK-------FKWKGFKEALKDPGVWPFSLCYFFLKL 287 (495)
T ss_pred HHheEEEEec--CChhhccccchHHHHHHHHHHHh--ccCCCcccc-------cCHHHHHHHHhchhHHHHHHHHHHHhh
Confidence 2221111111 0111000000000 0000 000001000 113466777789966553 33322222
Q ss_pred HhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 411 NVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 411 tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
+.-++....+.|+++ .|+|..+.+.+.....++|++|+++++.+..|++
T Consensus 288 -v~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 288 -VNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred -ccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 212366678888887 6799999999999999999999999999999976
No 140
>PRK09848 glucuronide transporter; Provisional
Probab=97.08 E-value=0.03 Score=59.80 Aligned_cols=160 Identities=12% Similarity=0.034 Sum_probs=99.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+||.|..+....++...+-..+....|.++....+ +....+++.....+..++.++..|.+.||+++|+++...-++..
T Consensus 226 ~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~ 305 (448)
T PRK09848 226 RNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGT 305 (448)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 78889888888888888877777777777776666 55544444444456678889999999999999999887765432
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCc----hhHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINR----PIALAKANAVLNR 299 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~----~~~L~~aNs~l~~ 299 (512)
+ .+.+..+ ... .+ .+.+++..++.+..+....+... ++..| +++.++ .++-...++...-
T Consensus 306 i----~~~~~~~---~~~--~~--~~~~~~~~~l~g~G~~~~~~~~~-al~~~----~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 306 C----GYLLFFW---VSV--WS--LPVALVALAIASIGQGVTMTVMW-ALEAD----TVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred H----HHHHHHH---cCc--hh--HHHHHHHHHHHHHHHHHHHHHHH-HHHHH----hhhhhHHhhCccchhHHHHHHHH
Confidence 2 1112111 111 11 12223333344444444444333 23233 443320 0123556788888
Q ss_pred HHHHHHHHhHHHHHHHHhhcc
Q 010361 300 IDLLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 300 Idl~~kilGP~lgGlL~s~~s 320 (512)
.+.++..+||.+.|.+++..|
T Consensus 370 ~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 370 TRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 888999999999999987654
No 141
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.07 E-value=0.006 Score=64.10 Aligned_cols=159 Identities=16% Similarity=0.055 Sum_probs=96.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+++.++.+....++..++...+..-.+.+.....++....+.+.....++.++..+..|.++||++||+++..+-++..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 220 KNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVL 299 (437)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 67788888888888887776665544555444444444566666667888999999999999999999988776543322
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCC----chhHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGIN----RPIALAKANAVLNRI 300 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~----~~~~L~~aNs~l~~I 300 (512)
...+ ..+ .. ++ .+.+++..++.+.............+ .| +++.+ .+++-..+++.....
T Consensus 300 ----~~~~--~~~-~~---~~--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~G~~~~~~~~~ 362 (437)
T TIGR00792 300 ----GYLI--FFF-AG---SN--LPLILVLIILAGFGQNFVTGLVWALV-AD----TVDYGEWKTGVRAEGLVYSVRTFV 362 (437)
T ss_pred ----HHHH--HHH-cc---hh--HHHHHHHHHHHHHHHHHHHHHHHHHH-hh----hhhhhhhhcCccchHHHHHHHHHH
Confidence 1111 111 11 11 11222333333333333332222221 22 33211 012456778888888
Q ss_pred HHHHHHHhHHHHHHHHhhcc
Q 010361 301 DLLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 301 dl~~kilGP~lgGlL~s~~s 320 (512)
+.++..+||.++|.+++..|
T Consensus 363 ~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 363 RKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999987654
No 142
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.03 E-value=0.033 Score=61.02 Aligned_cols=245 Identities=17% Similarity=0.198 Sum_probs=118.6
Q ss_pred HHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHH-HHHHHHHHHhHh
Q 010361 190 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLV-LAGAVERLTGVA 268 (512)
Q Consensus 190 ~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~-llg~i~~l~sva 268 (512)
...+..++.+|..|.+.||+.||..+...-...-+. ..+..+. ..|+.+.. +.|......+..
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~----~~~~~~~------------~~~~~~~~~l~g~~~~~~s~~ 133 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILP----ALCLLFQ------------GYWFFLLLGLSGGFSAIFSVG 133 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHh----HHHHHHH------------HHHHhhhcccccchhhhhhhh
Confidence 447788999999999999999998876665432111 1111110 01222211 222222222222
Q ss_pred hhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010361 269 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNK 348 (512)
Q Consensus 269 ~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~r 348 (512)
+ +++.-++.+ +.-...=+.+...=.....+||+++|.+.-..|......+ ...+.....+ +. .
T Consensus 134 ~------a~vadis~~---~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~i----a~~~~~~~~~--y~--~ 196 (463)
T KOG2816|consen 134 F------AYVADISSE---EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLI----AAASGILSLL--YM--L 196 (463)
T ss_pred h------hheeeccch---hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHH----HHHHHHHHHH--HH--h
Confidence 1 222234443 2233333333333334679999999999887663222212 2222211111 11 1
Q ss_pred hcccc-ccccccccccCCCCCCCCCCCCcchhHHhHHHHHHhHhhh---hcCcchhHH-HHHHHHHHHhhhhhhHHHHHH
Q 010361 349 ISSGV-LDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEY---MQQPVLPAS-LAYVLLCLNVVLTPGSLMTAF 423 (512)
Q Consensus 349 v~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~eG~~~y---~~qpvl~as-la~alL~~tvll~~~~l~v~y 423 (512)
+-.|| ++.++.+...+++. .++. ....+..+-++.+ -++|..+.. +...+++.....+.......|
T Consensus 197 ~~l~Esl~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~y 267 (463)
T KOG2816|consen 197 LFLPESLQEKERSDATLREL----TPGS-----LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLY 267 (463)
T ss_pred hccccccCcccccccccccc----CCCc-----ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEE
Confidence 11132 22111110001000 0010 0111222222222 234444442 222344444311122133556
Q ss_pred HHH-hCCCcchhHHHHHHHHHHHHHHHH-HHHHHHHhhChhhHHHHHHHHHHHHH
Q 010361 424 LTQ-RGLNPSIIGGFSGLCASMGVAATF-LSAYLVRRLGILKAGAAGLIFQASLL 476 (512)
Q Consensus 424 l~~-lGls~~~iG~~~g~gavgGLlGt~-lap~L~rRlG~~ragl~~l~~Q~~~L 476 (512)
++. .|.++..++.+.+....-+..+-+ ..|.+.+.+|..+....|++.+..++
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~ 322 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQL 322 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHH
Confidence 664 799999999888888777776555 45588999999988778877776644
No 143
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.01 E-value=0.053 Score=57.16 Aligned_cols=156 Identities=15% Similarity=0.073 Sum_probs=92.6
Q ss_pred CCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQL-WNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri-~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
+++.++.++...++...+... ..+-.|++... .+ +....+.......+..++.+...|.+.||..|+.++. ..++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~-~~~~~ 291 (394)
T PRK10213 214 QRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNL-AGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAG-APLVL 291 (394)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH-HHHHH
Confidence 566677766665555544433 33445777644 35 7777777666667777888889999999965443333 32221
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+ ..+.+ .. .. .+ .+.+++..++.|....+..+..+..+++. +++ +..++++.......
T Consensus 292 ~~---~~~~l--~~-~~----~~--~~~~~~~~~l~G~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~~~~ 350 (394)
T PRK10213 292 AV---SALVL--TL-WG----SD--KIVATGVAIIWGLTFALVPVGWSTWITRS-----LAD----QAEKAGSIQVAVIQ 350 (394)
T ss_pred HH---HHHHH--HH-Hh----hh--HHHHHHHHHHHHHHHHhhhHHHHHHHHHH-----Ccc----cHHHHHHHHHHHHH
Confidence 11 11111 11 11 11 12233444455666666666666555553 332 45577777777888
Q ss_pred HHHHHhHHHHHHHHhhcchhh
Q 010361 303 LCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s~~~ 323 (512)
.+..+||.++|.+++..+...
T Consensus 351 lg~~~G~~l~G~l~~~~g~~~ 371 (394)
T PRK10213 351 LANTCGAAIGGYALDNIGLTS 371 (394)
T ss_pred HHHHHHHHHHHHHHhccChhh
Confidence 899999999999999776544
No 144
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=96.99 E-value=0.015 Score=59.73 Aligned_cols=149 Identities=18% Similarity=0.069 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHH
Q 010361 152 LYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSA 230 (512)
Q Consensus 152 L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~ 230 (512)
+........+.......-.|.++....+ +....+.......+..++..+..|.+.||++||+.+..+-++... .+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~----~~ 318 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQL----LI 318 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHH----HH
Confidence 3333333344443444446777766667 888888888888888899999999999999999988766543211 11
Q ss_pred HHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHH
Q 010361 231 AMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 310 (512)
Q Consensus 231 ~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~ 310 (512)
+.... .. .+ .+.+.+..++.+.+......... .++...+++ ++..++++....+..+...+||.
T Consensus 319 -~~~~~--~~---~~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~g~~~~~~~~g~~~g~~ 382 (405)
T TIGR00891 319 -IPVFA--IG---AN--VAVLGLGLFFQQMLVQGIWGILP-----KHLGEYFPT---DQRAAGLGFTYQLGNLGGALAPI 382 (405)
T ss_pred -HHHHH--hC---Cc--hHHHHHHHHHHHHHHccchhhHH-----HHHhhhCCc---chhHHHhhHHHHHHHHHHHHHHH
Confidence 11111 11 11 11122222222222111111111 123335554 37889999999999999999999
Q ss_pred HHHHHHhhcc
Q 010361 311 LFGILLSKYE 320 (512)
Q Consensus 311 lgGlL~s~~s 320 (512)
++|.+....|
T Consensus 383 ~~g~l~~~~g 392 (405)
T TIGR00891 383 IGALLAQRLD 392 (405)
T ss_pred HHHHHHHhcc
Confidence 9999998765
No 145
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=96.99 E-value=0.027 Score=65.09 Aligned_cols=114 Identities=18% Similarity=0.166 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHH
Q 010361 185 AVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERL 264 (512)
Q Consensus 185 av~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l 264 (512)
.+..+...+..++...++|.++||++||+++..+-++.++. +.+ +.+ .. + ...++++.++.+.....
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~----~ll--~~~-~~----s--~~~ll~~~~l~g~~~~~ 664 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCIS----CFF--LSF-GN----S--ESAMIALLCLFGGLSIA 664 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH----HHH--HHH-Hc----c--HHHHHHHHHHHHHHHHH
Confidence 44456667888999999999999999999988776553221 111 111 11 1 11122222233332222
Q ss_pred HhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q 010361 265 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY 319 (512)
Q Consensus 265 ~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~ 319 (512)
+..... ++-.+ +.+. +...++.+.....-.++.++||.++|.++...
T Consensus 665 ~~~~~~-a~~aE----l~Pt---~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~ 711 (742)
T TIGR01299 665 AWNALD-VLTVE----LYPS---DKRATAFGFLNALCKAAAVLGILIFGSFVGIT 711 (742)
T ss_pred HHHHHH-HHHHH----HcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222222 12223 4443 36788999999999999999999999988753
No 146
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=96.96 E-value=0.067 Score=55.84 Aligned_cols=154 Identities=10% Similarity=-0.070 Sum_probs=98.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++++++.+....++-..+.....--.|+++.+ .+ +...++..-....+..++..+..|++.||+++|+++..+-+...
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACV 281 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHH
Confidence 67788888888888788877777777888877 55 88888888888899999999999999999999998876654322
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHH-HHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR-IDL 302 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~-Idl 302 (512)
+- .+.... . ++ .+.++...++-++...++.++...-++ .. ++ ++..++=+.... .-.
T Consensus 282 ~~------~~~~~~-~----~~--~~~~~~~q~l~g~~~~~~~~~~~~~i~-----~~-~~---~~~~~~q~~~~~~~~g 339 (382)
T TIGR00902 282 GR------WAIIGA-I----EA--FPLIFLLQILHCGTFAVCHLAAMRYIA-----AQ-PG---SEIAKLQALYNALAMG 339 (382)
T ss_pred HH------HHHHHh-H----hh--HHHHHHHHHHHHHHHHHHHHHHHHHHH-----hC-CH---hhHHHHHHHHHHHHHH
Confidence 11 111111 1 11 122344444555555555544332222 12 22 122333232222 234
Q ss_pred HHHHHhHHHHHHHHhhcch
Q 010361 303 LCEIAGASLFGILLSKYEP 321 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s~ 321 (512)
+...+||.++|.++..++.
T Consensus 340 ~g~~~g~~~~G~l~~~~g~ 358 (382)
T TIGR00902 340 GLIAIFTAFAGFIYPTLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHHhccH
Confidence 6778999999999998875
No 147
>PRK12382 putative transporter; Provisional
Probab=96.93 E-value=0.04 Score=57.28 Aligned_cols=143 Identities=13% Similarity=-0.055 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 160 NLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTV 239 (512)
Q Consensus 160 ~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~ 239 (512)
..+......-.|.+..+..-+ ..+.......+..++..+..|.+.||++|||.+..+-.+..+. ..+ .. ..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~----~~~--~~-~~ 299 (392)
T PRK12382 229 GVGFAVIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVG----LLL--LW-LA 299 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHH----HHH--HH-Hc
Confidence 334333434445555443212 2233333345556778899999999999999887765543221 111 11 11
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q 010361 240 IPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY 319 (512)
Q Consensus 240 ~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~ 319 (512)
+ + .+.+++..++.+.......+.....+.+ ..++ ++..++++.......++..+||.++|.+....
T Consensus 300 ~----~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~-----~~~~---~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~ 365 (392)
T PRK12382 300 P----T--AWVALAGAALTGAGCSLIFPALGVEVVK-----RVPS---QVRGTALGGYAAFQDIAYGVSGPLAGMLATSF 365 (392)
T ss_pred c----c--HHHHHHHHHHHHHHHHhHHHHHHHHHHH-----hcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 1122233333444333333322222221 2333 37889999999999999999999999999877
Q ss_pred chhhHH
Q 010361 320 EPVTCL 325 (512)
Q Consensus 320 s~~~~i 325 (512)
|.....
T Consensus 366 g~~~~~ 371 (392)
T PRK12382 366 GYPSVF 371 (392)
T ss_pred CchHHH
Confidence 654433
No 148
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=96.89 E-value=0.073 Score=58.44 Aligned_cols=168 Identities=13% Similarity=0.049 Sum_probs=110.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCCh--hHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRI--PAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr--~vmi~~dlv 221 (512)
+.|+..++.++.++-+=|-....--..+|+....+ |.....+++++..+..++.+...|.+.||++-| ++++.+.++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLIL 358 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 55677778888888776666666666788888888 999999999999999999999999999999888 666666543
Q ss_pred HHHHHHHHHHHHHHHHh-hcccCCCch-hHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHT-VIPTSSSML-LHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR 299 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~-~~~~~~~~l-~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~ 299 (512)
-.+. ++ +... ......+.. .+..++..++.|....-.. +..|...-.+.+++ +-.+--+--.-
T Consensus 359 ~~~i-----~~--~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~q-----s~sRs~~~~LiP~g---~e~efFgly~i 423 (477)
T PF11700_consen 359 WIII-----PL--YGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQ-----SASRSLFSRLIPPG---REAEFFGLYAI 423 (477)
T ss_pred HHHH-----HH--HHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHH-----HHHHHHHHHhCCCc---hhhHHHHHHHH
Confidence 2111 11 1111 000000111 1223444444443322222 23344444477775 56888999999
Q ss_pred HHHHHHHHhHHHHHHHHhhcch-hhHHHH
Q 010361 300 IDLLCEIAGASLFGILLSKYEP-VTCLKF 327 (512)
Q Consensus 300 Idl~~kilGP~lgGlL~s~~s~-~~~i~~ 327 (512)
.+..+.++||++.|.+....+. ..++..
T Consensus 424 ~gk~ss~lGPll~g~i~~~tg~~r~g~~~ 452 (477)
T PF11700_consen 424 TGKASSWLGPLLFGLITDATGSQRYGFLF 452 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 9999999999999999998763 344443
No 149
>PRK11663 regulatory protein UhpC; Provisional
Probab=96.85 E-value=0.083 Score=56.27 Aligned_cols=161 Identities=12% Similarity=-0.043 Sum_probs=90.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc--CChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS--PRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~--~Rr~vmi~~dlv 221 (512)
+++.++.+..+.++..+.......=.|.++....+ +....+.+.....+..++.....|.+.||+ +||+.+...-.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~ 320 (434)
T PRK11663 241 LNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAA 320 (434)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHH
Confidence 34556666666665555444444456778766667 888888777777888899999999999998 333333222111
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
- . ...... .+. ... .+ ...+++..+.+|....-........+ .+ ..++ ++-..+++..+...
T Consensus 321 ~-~--~~~~~~-~~~--~~~--~~--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~----~~~~---~~~g~~~g~~~~~~ 382 (434)
T PRK11663 321 G-I--LLSVGS-LWL--MPF--AS--YVMQAACFFTIGFFVFGPQMLIGMAA-AE----CSHK---EAAGAATGFVGLFA 382 (434)
T ss_pred H-H--HHHHHH-HHH--ccc--cc--HHHHHHHHHHHHHHHhhHHHHHHHHH-Hh----cccH---hhHHhHHHHHHHHH
Confidence 0 0 111111 111 111 11 11112222222321110000111111 12 2332 47889999999999
Q ss_pred HHHHHHhHHHHHHHHhhcchhh
Q 010361 302 LLCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 302 l~~kilGP~lgGlL~s~~s~~~ 323 (512)
.++..+||.+.|.+.+..|...
T Consensus 383 ~~g~~~~p~~~g~l~~~~g~~~ 404 (434)
T PRK11663 383 YLGAALSGYPLAKVLEIWHWTG 404 (434)
T ss_pred HHHHHHhcccHHHHHHhcccHH
Confidence 9999999999999999776443
No 150
>PRK11010 ampG muropeptide transporter; Validated
Probab=96.84 E-value=0.096 Score=57.25 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=54.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHH-HHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 146 PEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMG-FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 146 ~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~-~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
++.++.+....++-.+++.....-.+-++....+ +...++.+. ....+..++.++..|.++||++|||.+...-+++
T Consensus 221 ~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~ 299 (491)
T PRK11010 221 RNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQ 299 (491)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4445555555566667766655445556656567 888888876 4666788999999999999999988776554444
No 151
>PF13347 MFS_2: MFS/sugar transport protein
Probab=96.80 E-value=0.014 Score=62.05 Aligned_cols=79 Identities=19% Similarity=0.138 Sum_probs=70.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+||.+++++..+++..++..+..-..+.+.....++.-..+.+.....++.++..|+.+.++||++||+++..+-++..
T Consensus 223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAA 301 (428)
T ss_pred ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHH
Confidence 7899999999999999999999988899998888844667888888899999999999999999999999998876643
No 152
>PRK09669 putative symporter YagG; Provisional
Probab=96.79 E-value=0.016 Score=61.96 Aligned_cols=161 Identities=11% Similarity=-0.008 Sum_probs=92.7
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 144 AHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 144 ~~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
.+|+.|+.+....++..++..+..-..+.+.....+..-..+.+.....++.++..++.|.+.||++||+.++...++..
T Consensus 226 ~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~ 305 (444)
T PRK09669 226 LGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFV 305 (444)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 37888999999888888877666543333333333333333445556677778888899999999999999887654322
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCch---h-HHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRP---I-ALAKANAVLNR 299 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~---~-~L~~aNs~l~~ 299 (512)
+ +.+..+ .... ++ .+.+++..++.+.......+... ++-.| +++.++. + .-....+...-
T Consensus 306 ~-----~~~~~~--~~~~--~~--~~~~~~~~~i~g~~~~~~~~~~~-am~ad----~~d~~e~~~G~r~~g~~~s~~~~ 369 (444)
T PRK09669 306 I-----LSALIF--FIPP--SN--VWLIFALNILFNFIQNLTTPLQW-SMFSD----VVDYEEKRSGRRLDGLVFSTNLF 369 (444)
T ss_pred H-----HHHHHH--HhCc--ch--HHHHHHHHHHHHHHHHHHHHHHH-HHHHh----hhhhhhhhcCcCcchHHHHHHHH
Confidence 1 111111 1111 11 12223333344444444433332 22223 5542210 0 11123566677
Q ss_pred HHHHHHHHhHHHHHHHHhhcc
Q 010361 300 IDLLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 300 Idl~~kilGP~lgGlL~s~~s 320 (512)
...++..+||.++|.+++..|
T Consensus 370 ~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 370 AIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 778899999999999988764
No 153
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=96.78 E-value=0.094 Score=55.11 Aligned_cols=155 Identities=14% Similarity=-0.022 Sum_probs=95.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.+....++...+......-+|.++.+ .+ +....+.+.....+..++..+..|.+.||.+||++++..-.+..
T Consensus 203 ~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~ 281 (393)
T PRK09705 203 FTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQL 281 (393)
T ss_pred cCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Confidence 45566666666666667766666667888776 56 88888888888888889999999999999999998877654432
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ .+.+..+ ... + ...++..+..++.. ...........+ ..++ +++..++.+.++..-.+
T Consensus 282 ~----~~~~~~~---~~~---~--~~~~~~~l~g~g~g-~~~~~~~~~~~~------~~~~--~~~~g~~~g~~~~~~~~ 340 (393)
T PRK09705 282 V----GFCGFIW---LPL---Q--LPVLWAMVCGLGLG-GAFPLCLLLALD------HSVQ--PAIAGKLVAFMQGIGFI 340 (393)
T ss_pred H----HHHHHHH---ccc---h--HHHHHHHHHHHhcc-chHHHHHHHHHh------hcCC--HHHHHHHHHHHHHHHHH
Confidence 2 1111111 111 1 01111111111111 111111111121 2222 13567788888888888
Q ss_pred HHHHhHHHHHHHHhhcch
Q 010361 304 CEIAGASLFGILLSKYEP 321 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~ 321 (512)
+..+||.++|.+.+..|.
T Consensus 341 ~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 341 IAGLAPWFSGVLRSISGN 358 (393)
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 899999999999997764
No 154
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=96.72 E-value=0.027 Score=56.83 Aligned_cols=159 Identities=15% Similarity=0.045 Sum_probs=95.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc-CChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS-PRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~-~Rr~vmi~~dlvq 222 (512)
+++.++.+....++...+......-.|.++....+ +....+.+.....+..++..+..|.+.||. +||+.....-..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~- 292 (379)
T TIGR00881 214 LNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFM- 292 (379)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHH-
Confidence 45667778888887777777777778888887777 888888888888888889999999999985 344333222111
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.. ..+.+... .... ..+ ....++..++.|........... .+..+ .+++ ++..++++.......
T Consensus 293 ~~---~~~~~~~~--~~~~-~~~--~~~~~~~~~~~g~~~~~~~~~~~-~~~~~----~~~~---~~~g~~~g~~~~~~~ 356 (379)
T TIGR00881 293 AL---IIVSLLVY--WLNP-AAN--PLMDLICLFALGFLVYGPQMLIG-VIASE----LAPK---KAAGTAAGFVGFFAY 356 (379)
T ss_pred HH---HHHHHHHH--hcCc-chh--HHHHHHHHHHHHHHHhhhhHHHH-HHHHH----hcCc---chhHHHHHHHHHhhh
Confidence 00 11111111 1110 011 11112222233322111111111 11112 4444 368899999999999
Q ss_pred HHHHHhHHHHHHHHhhcc
Q 010361 303 LCEIAGASLFGILLSKYE 320 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s 320 (512)
+...+||.+.|.+....|
T Consensus 357 ~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 357 LGGILAGLPLGYLADGFG 374 (379)
T ss_pred hhhhhhhhhHHHHHHhhc
Confidence 999999999999988765
No 155
>PRK12307 putative sialic acid transporter; Provisional
Probab=96.70 E-value=0.072 Score=55.86 Aligned_cols=134 Identities=7% Similarity=-0.121 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchh
Q 010361 169 AWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLL 248 (512)
Q Consensus 169 AlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~ 248 (512)
-+|.++....-+....+.......+..++..+..|.+.||++||+++..+-++..+ .+.. .. .... ..
T Consensus 253 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~----~~~~--~~-~~~~--~~--- 320 (426)
T PRK12307 253 LLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFL----FIFP--LF-RIPQ--DN--- 320 (426)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH----HHHH--HH-HHcc--cc---
Confidence 45666665422766777776777778888899999999999999987766543211 1111 11 1111 11
Q ss_pred HHHHHHHHHHHHH--HHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhh
Q 010361 249 HPWFFVLVLAGAV--ERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 249 ~~l~~v~~llg~i--~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~ 323 (512)
.+.+..++.+.. .......... ++....++ +...++.+.....-.+...+||.++|.+....+...
T Consensus 321 -~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~---~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~ 388 (426)
T PRK12307 321 -YLLLGACLFGLMATNVGVGGLVPK-----FLYDYFPL---EVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGA 388 (426)
T ss_pred -HHHHHHHHHHHHHhcccHhHHHHH-----HHHHhCcH---HHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHH
Confidence 111111122211 1000111111 11224444 367888998888888899999999999998777543
No 156
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.61 E-value=0.082 Score=54.17 Aligned_cols=154 Identities=10% Similarity=-0.025 Sum_probs=85.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc-CChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS-PRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~-~Rr~vmi~~dlvq 222 (512)
+++.++.+.....+..........-+|.++.+. + +....+.+.....+..++..+..|.+.||+ +||+++...-+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~ 273 (355)
T TIGR00896 195 RSPLAWQVTVFFGLQSGLYYSLIGWLPAILISH-GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQ 273 (355)
T ss_pred cCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Confidence 455565554444454444444444568887664 5 888888888888888999999999999999 5666655544332
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+ +..+..+ ... .. .+. ..++.|.......+.....+.. ..++ +++-....+.++.+..
T Consensus 274 ~~----~~~~~~~---~~~--~~----~~~-~~~l~g~~~g~~~~~~~~~~~~-----~~~~--~~~~g~~~~~~~~~~~ 332 (355)
T TIGR00896 274 LV----GLCGLLF---APM--HG----LWA-WALVLGLGQGGAFPLALTLIGL-----RSRQ--AAQAAALSAMAQSIGY 332 (355)
T ss_pred HH----HHHHHHH---hhh--hH----HHH-HHHHHHHhhhhHhHHHHHHHHH-----hccC--HHHHHHHHHHHHHHHH
Confidence 22 1111111 111 11 111 1223333332222211111110 1111 2244556666777777
Q ss_pred HHHHHhHHHHHHHHhhcc
Q 010361 303 LCEIAGASLFGILLSKYE 320 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s 320 (512)
+...+||.++|.+.+..+
T Consensus 333 ~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 333 LLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 778899999999988654
No 157
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.59 E-value=0.15 Score=53.10 Aligned_cols=145 Identities=14% Similarity=-0.069 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 010361 157 LAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHA 236 (512)
Q Consensus 157 ~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~ 236 (512)
.+..++......-+|++..+..-+ ..+.......+..++..+..|.+.||++||+++...-++..+ ...+ ..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~----~~~~--~~ 297 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEIL----GLLL--LW 297 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH----HHHH--HH
Confidence 333444444444455555443211 122222333445566678899999999999987766544322 1111 11
Q ss_pred HhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 010361 237 HTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL 316 (512)
Q Consensus 237 ~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~ 316 (512)
. . .+ .+.+++..++.|.......+.....+. + .+++ ++..++.+.+.....+...++|.+.|.+.
T Consensus 298 ~-~----~~--~~~~~~~~~l~G~~~~~~~~~~~~~~~-~----~~~~---~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 362 (399)
T PRK05122 298 L-A----PS--PWMALIGAALTGFGFSLVFPALGVEAV-K----RVPP---QNRGAALGAYSVFLDLSLGITGPLAGLVA 362 (399)
T ss_pred H-h----cc--HHHHHHHHHHHHHhHHHHHHHHHHHHH-H----hCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 11 112233333444433333322222111 1 2333 37889999999888888889999999998
Q ss_pred hhcchhhH
Q 010361 317 SKYEPVTC 324 (512)
Q Consensus 317 s~~s~~~~ 324 (512)
...+....
T Consensus 363 ~~~g~~~~ 370 (399)
T PRK05122 363 SWFGYPSI 370 (399)
T ss_pred HHcCHHHH
Confidence 87765443
No 158
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.56 E-value=0.11 Score=61.99 Aligned_cols=152 Identities=17% Similarity=0.043 Sum_probs=99.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-Chh-HHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLL-PVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll-~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
+++.++.+.++.++..+...+....+|.++....+ +.. ..+++.....+..++.+.+.|.+.||..+++++...-++-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~ 309 (1146)
T PRK08633 230 SDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGL 309 (1146)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHH
Confidence 45666766677777777777777788888888777 766 7888888888888999999999999999888766543322
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+ + ++.+. ... + .+.+++..++.|.......+..+..++. .++++ ...++++....+..
T Consensus 310 ~~----~--~~~~~-~~~----~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~p~~---~rg~~~~~~~~~~~ 368 (1146)
T PRK08633 310 AL----S--LFLLP-TAP----S--LASVLVLFFLFGFSAGLFIVPLNALIQF-----RAPEK---ELGKVLAANNFLQN 368 (1146)
T ss_pred HH----H--HHHHH-Hhh----h--HHHHHHHHHHHHHHHHHhhHHHHHHHhh-----cCCcc---chhhhhHHHHHHHH
Confidence 11 1 11111 111 1 1222333444555555544444433322 44442 67888888888888
Q ss_pred HHHHHhHHHHHHHHh
Q 010361 303 LCEIAGASLFGILLS 317 (512)
Q Consensus 303 ~~kilGP~lgGlL~s 317 (512)
+..+++|.+++++..
T Consensus 369 lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 369 VGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888889988887765
No 159
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=96.52 E-value=0.1 Score=54.58 Aligned_cols=159 Identities=8% Similarity=0.017 Sum_probs=87.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLH---P-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~---~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dl 220 (512)
++++++.+....+.....-.......|.|+.... + +....+.+.....+..++.....|.+.||.+||+++...-+
T Consensus 213 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~ 292 (396)
T TIGR00882 213 RQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGT 292 (396)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 5666666655555544444445555777776654 3 45566777777788888889999999999999998766543
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHH-HHH
Q 010361 221 VQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAV-LNR 299 (512)
Q Consensus 221 vq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~-l~~ 299 (512)
+-.+ ..+.+. .. .+ .+.+++..++-+ ++........ -++++...+++ .-..+++. .+.
T Consensus 293 l~~l------~~~~~~--~~---~~--~~~~~~~~~l~g----~~~~~~~~~~-~~~~~~~~~~~---~~at~~~~~~~~ 351 (396)
T TIGR00882 293 IMSV------RIIGSS--FA---TT--ALEVVILKMLHA----FEVPFLLVGC-FKYITSQFDVR---LSATIYLIGFQF 351 (396)
T ss_pred HHHH------HHHHHH--hc---CC--hHHHHHHHHHHH----HHHHHHHHHH-HHHHHHhCCcc---eEEEeehHHHHH
Confidence 2111 111111 11 11 111122222222 2222221111 12222233321 12222333 445
Q ss_pred HHHHHHHHhHHHHHHHHhhcchhhH
Q 010361 300 IDLLCEIAGASLFGILLSKYEPVTC 324 (512)
Q Consensus 300 Idl~~kilGP~lgGlL~s~~s~~~~ 324 (512)
...++.++||.++|.++...|....
T Consensus 352 ~~~lg~~~~~~l~G~l~~~~G~~~~ 376 (396)
T TIGR00882 352 AKQLAMIFLSTLAGNMYDSIGFQGA 376 (396)
T ss_pred HHHHHHHHHHHhHHHHHHhcccHHH
Confidence 7788999999999999998775443
No 160
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=96.49 E-value=0.059 Score=57.65 Aligned_cols=69 Identities=12% Similarity=0.081 Sum_probs=57.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChh
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIP 213 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~ 213 (512)
+++.++.++..++...++......-+|.|+....+ +....+.+.....+..++.++.+|.+.||..||+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~ 328 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK 328 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45667888888888888888777788999988877 8888888888888888999999999999976543
No 161
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=96.45 E-value=0.076 Score=63.62 Aligned_cols=159 Identities=14% Similarity=0.002 Sum_probs=104.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.+.++.++..+.-......+|.|+...++ +....+.+..+..+..++.+...|.+.||..+++.+...-++-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~ 302 (1140)
T PRK06814 223 ADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMG 302 (1140)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHH
Confidence 67788888888888777776777778999988887 88888888888888999999999999988776664443322211
Q ss_pred HHHHHHHHHHHHHHhhc---c----------cCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHH
Q 010361 224 AAQLLSAAMIIHAHTVI---P----------TSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIAL 290 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~---~----------~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L 290 (512)
+. .+.+ .+..... . ...+ .+.+++..+++|.......+.....+++ .++++ ..
T Consensus 303 ~~---~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~p~~---~~ 368 (1140)
T PRK06814 303 LF---GLDL-AFASSSVPAEPAQLKSILVFLSKRH--GWRILIDLFGLAAAGGLYIVPLFAALQA-----WANPA---HR 368 (1140)
T ss_pred HH---HHHH-Hhcccccccccccccchhhhhcccc--cHHHHHHHHHHHHHHHHhHHHHHHHHHh-----hCCcc---cc
Confidence 11 1111 1100000 0 0011 1222333445566555555555444443 45543 78
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 010361 291 AKANAVLNRIDLLCEIAGASLFGILLS 317 (512)
Q Consensus 291 ~~aNs~l~~Idl~~kilGP~lgGlL~s 317 (512)
.++.+..+.+..+...+||+++|.+..
T Consensus 369 G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 369 ARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999974
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=96.37 E-value=0.093 Score=55.92 Aligned_cols=161 Identities=14% Similarity=0.062 Sum_probs=89.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCC-hhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPR-IPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~R-r~vmi~~dlvq 222 (512)
+++.++.+....++...+......-+|.++....+ +....+.+.....+..++..+..|.+.||+.| |+.+...-..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~- 327 (438)
T TIGR00712 249 PNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFM- 327 (438)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHH-
Confidence 66677777777777666655555566888887777 88888888888888889999999999999843 3333222111
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhh-hhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV-AVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~i-averdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
.. ..+..+.+ .... ..+. +......+.++.. ........ ....+ ..++ +...++.+....+.
T Consensus 328 ~~---~~~~~~~~--~~~~-~~~~--~~~~~~~~~~g~~--~~~~~~~~~~~~~~----~~~~---~~~g~~~g~~~~~~ 390 (438)
T TIGR00712 328 TL---VTIAVIVY--WMNP-AGNP--LVDMICMIVIGFL--IYGPVMLIGLHALE----LAPK---KAAGTAAGFTGLFG 390 (438)
T ss_pred HH---HHHHHHHH--HhcC-CCch--HHHHHHHHHHHHH--HccHHHHHHHHHHH----hcCh---hheeeehhhhchHH
Confidence 00 01111111 1111 0111 1111222222221 11111111 11112 3333 25667888887776
Q ss_pred HHH-HHHhHHHHHHHHhhcchhh
Q 010361 302 LLC-EIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 302 l~~-kilGP~lgGlL~s~~s~~~ 323 (512)
... ..+||.++|.+.+..+...
T Consensus 391 ~~gg~~~gp~l~G~l~~~~g~~~ 413 (438)
T TIGR00712 391 YLGGSVAASAIVGYTVDFFGWDG 413 (438)
T ss_pred HhhhhhhcchhHHHHHHhccchH
Confidence 665 5789999999998766433
No 163
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=96.34 E-value=0.022 Score=57.12 Aligned_cols=145 Identities=19% Similarity=0.069 Sum_probs=95.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-C-hhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-S-LLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-S-ll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+.++.++...++..+.......-.|.++....+ + ....+.+.....+..++.++..|.+.||.++++.+...-....+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 285 (352)
T PF07690_consen 206 PVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLIL 285 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 344557777777777888889999998766666 7 78888878888888888899999999999987776665443211
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 304 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~ 304 (512)
.... +. .... ..+ ....++..++.|.......+.....+.+ .++++ +..++++....+..++
T Consensus 286 ----~~~~--~~-~~~~-~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~---~~g~~~g~~~~~~~~~ 347 (352)
T PF07690_consen 286 ----GALG--LL-LLPF-SSS--PVWLIIALFLIGFGFGIVFPILFSLIQE-----LVPPE---YRGTAFGLFNSIGSLG 347 (352)
T ss_dssp ----HHHH--HC-CSHH-HCH--HHHHHHHHHHHHHHHHHHCHHHHHHHHC-----CCHTC---HHHHHHHHHHHHHHHH
T ss_pred ----HHHH--HH-HHHH-hhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCHH---HHHHHHHHHHHHHHHH
Confidence 1111 10 0000 000 1112233445566555555555444433 55543 7899999999999999
Q ss_pred HHHhH
Q 010361 305 EIAGA 309 (512)
Q Consensus 305 kilGP 309 (512)
.++||
T Consensus 348 ~~igP 352 (352)
T PF07690_consen 348 GIIGP 352 (352)
T ss_dssp HHHHH
T ss_pred HHHCC
Confidence 99988
No 164
>PRK09952 shikimate transporter; Provisional
Probab=96.33 E-value=0.39 Score=51.35 Aligned_cols=148 Identities=13% Similarity=0.006 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHH
Q 010361 155 CCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI 233 (512)
Q Consensus 155 g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li 233 (512)
..+...++-.....-.|.|+....+ +...+...+....+..++..+..|.+.||++|||+++..-++..+ ....
T Consensus 258 ~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~----~~~~- 332 (438)
T PRK09952 258 LRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTL----SAFP- 332 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH----HHHH-
Confidence 3444444444444445556655555 554444455555666677788999999999999988766443211 1111
Q ss_pred HHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHH-HHHHHHHhHHHH
Q 010361 234 IHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI-DLLCEIAGASLF 312 (512)
Q Consensus 234 ~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~I-dl~~kilGP~lg 312 (512)
+...... .+. ...+++..++.+........... + +++.+.+.+ ....+++....+ ..+...++|.++
T Consensus 333 -~~~~~~~--~~~-~~~~~~~~~l~~~~~~~~~~~~~-~----~~~e~~p~~---~r~tg~g~~~~~~~~lgg~~~p~i~ 400 (438)
T PRK09952 333 -FFMALEA--QSI-FWIVFFSIMLANIAHDMVVCVQQ-P----MFTEMFGAS---YRYSGAGVGYQVASVVGGGFTPFIA 400 (438)
T ss_pred -HHHHHHc--CCh-HHHHHHHHHHHHHHHHHHHHHHH-H----HHHHHCCcc---hhHHHHhHHHHHHHHHHHHHHHHHH
Confidence 1111111 110 11111112222222222222222 2 222255542 455566665444 346788999999
Q ss_pred HHHHhhc
Q 010361 313 GILLSKY 319 (512)
Q Consensus 313 GlL~s~~ 319 (512)
|.++...
T Consensus 401 g~l~~~~ 407 (438)
T PRK09952 401 AALVTYF 407 (438)
T ss_pred HHHHHhc
Confidence 9998744
No 165
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=96.30 E-value=0.4 Score=50.47 Aligned_cols=157 Identities=14% Similarity=0.061 Sum_probs=95.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++......++.........+..|.++-...+ +....+.......+..++.++.+|++.||.++++++...-+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-- 280 (393)
T PRK11195 203 RDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-- 280 (393)
T ss_pred hCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH--
Confidence 44555554444444444445566677777777777 888889888888888899999999999999888776554211
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
....+... .. .+ .+.+.+..++.|....++.+..+..+++ ..+++ ....++.+..+..+++
T Consensus 281 -----~~~~~~~~--~~---~~--~~~~~~~~~~~G~~~g~~~~~~~~~~q~-----~~~~~--~~~g~~~a~~~~~~~~ 341 (393)
T PRK11195 281 -----GLVVLLMA--LQ---HS--LLPAYPLLILIGALGGFFVVPMNALLQH-----RGHVL--VGAGHSIAVQNFNENL 341 (393)
T ss_pred -----HHHHHHHH--HH---hH--HHHHHHHHHHHHHhhhhhhhhHHHHHHh-----hCccc--ccchhHHHHHhHHHHH
Confidence 11111111 11 11 1112233335566555655555554543 22221 1257777888899999
Q ss_pred HHHHhHHHHHHHHhhcchhh
Q 010361 304 CEIAGASLFGILLSKYEPVT 323 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~ 323 (512)
...+|..+.+.+.. .+...
T Consensus 342 ~~~~~~~~~~~~~~-~~~~~ 360 (393)
T PRK11195 342 AMLLMLGLYSLLVK-LGVPV 360 (393)
T ss_pred HHHHHHHHHHHHHH-cCCCH
Confidence 99999999997744 55433
No 166
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=96.27 E-value=0.42 Score=48.81 Aligned_cols=77 Identities=10% Similarity=-0.059 Sum_probs=59.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
+++.++.+.....+...+-..+....|.+.....+ +...++.+.....+..++.+++.|.+.||++||+.+...-++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~ 281 (385)
T TIGR00710 204 KSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLIL 281 (385)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 55667666666666666656666667888877777 888888888888888899999999999999999987765433
No 167
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.25 E-value=0.36 Score=51.87 Aligned_cols=161 Identities=17% Similarity=0.003 Sum_probs=94.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++..+..++-.++..-|.-+.--=+--++.+.++ |.-.++..-++..+..++-+..+|++.|| +.+++++...+..+
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a 287 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLA 287 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHH
Confidence 44455555544444444432222112223455666 88889999999999999999999999999 77777777665543
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+. ...+.+ . + .+ .+..++.+++.+....-.-+. |+..+++. .+++-..+.+.+...-++
T Consensus 288 ~~----~l~l~~--~-~---~~--~~~~~~~~~~wg~a~~~~~~~--------~~~~~a~~-~p~~~~~a~sl~~aa~nl 346 (394)
T COG2814 288 LA----LLALTF--T-G---AS--PALALALLFLWGFAFSPALQG--------LQTRLARL-APDAADLAGSLNVAAFNL 346 (394)
T ss_pred HH----HHHHHH--h-c---ch--HHHHHHHHHHHHHHhhhhhhH--------HHHHhccc-CCCchHHHHHHHHHHHHH
Confidence 32 111111 1 1 11 112222222323222221111 23334441 123677889999999999
Q ss_pred HHHHhHHHHHHHHhhcchhhHHHH
Q 010361 304 CEIAGASLFGILLSKYEPVTCLKF 327 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s~~~~i~~ 327 (512)
..-+|-.+||.++..+|.....++
T Consensus 347 gia~GA~lGG~v~~~~g~~~~~~~ 370 (394)
T COG2814 347 GIALGAALGGLVLDALGYAATGWV 370 (394)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHH
Confidence 999999999999998775443333
No 168
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=96.20 E-value=0.41 Score=49.73 Aligned_cols=77 Identities=5% Similarity=-0.176 Sum_probs=52.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
+++.++.+.....+...+-..+....|.+.....+ +....+.+.....+..++..+..|.+.||++||++++..-+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~ 278 (392)
T PRK10473 201 LNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVL 278 (392)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 45555554444443333333333445666666667 777778777777888889999999999999999988766543
No 169
>PRK15075 citrate-proton symporter; Provisional
Probab=96.18 E-value=0.27 Score=52.30 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHH
Q 010361 167 NFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (512)
Q Consensus 167 ~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dl 220 (512)
..-.|.|+....+ +....+.+.....+..++..+..|.+.||++||++++..-+
T Consensus 258 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~ 312 (434)
T PRK15075 258 TVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTV 312 (434)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 3446777776666 77777777777777788889999999999999998776543
No 170
>PRK09528 lacY galactoside permease; Reviewed
Probab=96.17 E-value=0.045 Score=57.74 Aligned_cols=78 Identities=14% Similarity=0.105 Sum_probs=62.4
Q ss_pred hhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHH
Q 010361 392 EYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (512)
Q Consensus 392 ~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l 469 (512)
++++||.++......++++.....+.+.+..|+++ .|+++.++|++.+..+++..++....+++.+|+|..|...++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~ 83 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWII 83 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 56788888776544444443323456788888886 8999999999999999999999999999999999998876543
No 171
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=96.15 E-value=0.13 Score=53.46 Aligned_cols=143 Identities=11% Similarity=-0.028 Sum_probs=75.6
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHH-HHhhcccCCCc
Q 010361 168 FAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIH-AHTVIPTSSSM 246 (512)
Q Consensus 168 FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~-~~~~~~~~~~~ 246 (512)
+-.|.+.....-+....+.+.....+..++..+.+|.+.||.+||+.+...-++..+ ...++.+ ........+..
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 380 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAI----CLFVLGILGASFVTGSSKS 380 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH----HHHHHHHHhhcccCCcccc
Confidence 334555443322666667777777777888899999999999999987766333211 1111110 01111100000
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcch
Q 010361 247 LLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEP 321 (512)
Q Consensus 247 l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~ 321 (512)
....++....+.+............++ +..+.++ +...++++.......++.+++|.+.|.+....+.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~---~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~ 448 (481)
T TIGR00879 381 SGNVAIVFILLFIAFFAMGWGPVPWVI----VSEIFPL---SLRPKGISIAVAANWLANFIVGFLFPTMLESIGV 448 (481)
T ss_pred hhHHHHHHHHHHHHHHHccccCeehhh----hhccCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 011111111111111111111111111 1224443 3677899999999999999999999998876553
No 172
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.11 E-value=3.4 Score=46.86 Aligned_cols=76 Identities=18% Similarity=0.052 Sum_probs=51.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHH----HHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNF----AWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~F----AlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dl 220 (512)
+.+.+.-.+++..+...+..+-.. .++....++.++. ..+.+..+.++...+..|++|++.|.++||.+++...+
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~ 116 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSL 116 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHH
Confidence 555666667777776666655443 2344445555532 22344455677788888999999999999999988875
Q ss_pred H
Q 010361 221 V 221 (512)
Q Consensus 221 v 221 (512)
+
T Consensus 117 l 117 (599)
T PF06609_consen 117 L 117 (599)
T ss_pred H
Confidence 4
No 173
>TIGR00898 2A0119 cation transport protein.
Probab=96.05 E-value=0.19 Score=54.15 Aligned_cols=149 Identities=11% Similarity=0.026 Sum_probs=77.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+++.++.......+..+...+..+++++++..+..+..... +...+..+......|.++||++||+++...-++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~ 397 (505)
T TIGR00898 321 RTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDL---FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGV 397 (505)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChHHHH---HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34556665555555555555666666666554444432222 223344455566678899999999998877654332
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHH-HHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGA-VERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~-i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
++.+..+ ... .. .+...+..++.+. ....+..... +++.+.+. +....+.+.......+
T Consensus 398 ----~~l~~~~---~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~e~~p~---~~r~~~~g~~~~~~~i 457 (505)
T TIGR00898 398 ----ALLLLLF---VPV--DL--YFLRTALAVLGKFGITSAFQMVYL------YTAELYPT---VVRNLGVGVCSTMARV 457 (505)
T ss_pred ----HHHHHHH---cCC--Cc--hHHHHHHHHHHHHHHHHHHHHHHH------HhcccccH---HHHhhhHhHHHHHHHH
Confidence 1111111 111 11 0111111111111 1112222221 22335543 2566778888888888
Q ss_pred HHHHhHHHHHHHHh
Q 010361 304 CEIAGASLFGILLS 317 (512)
Q Consensus 304 ~kilGP~lgGlL~s 317 (512)
+.++||.+.| +..
T Consensus 458 g~~i~p~i~~-~~~ 470 (505)
T TIGR00898 458 GSIISPFLVY-LGE 470 (505)
T ss_pred HHHHHhHHHH-HHH
Confidence 9999999999 443
No 174
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=96.03 E-value=0.4 Score=49.15 Aligned_cols=79 Identities=9% Similarity=-0.121 Sum_probs=60.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.+..+....++...+-..+....|.+.....+ +....+.+.....+..++.+++.|.+.||.+||+++...-+++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 271 (377)
T PRK11102 192 RHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQF 271 (377)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 45556665566666666655555556777777667 88888988888889999999999999999999998887766543
No 175
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=95.95 E-value=0.36 Score=50.96 Aligned_cols=154 Identities=11% Similarity=-0.058 Sum_probs=80.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecc-cCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDH-SPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR-~~Rr~vmi~~dlvq~ 223 (512)
+++.+..+....+.-.........-.|+++.+..++...++.+.....+..+++..+.+.+.|| ++.++.+..+-++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 285 (400)
T PRK11646 206 RDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMS 285 (400)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 4555655444333222222222345688887765555556665555555555555566777765 454544433322211
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
+ .++... .. ++ .+.+.+..++.+.......+.....+. + .++++ +..++.+..+....+
T Consensus 286 ~------~~~~l~--~~---~~--~~~~~~~~~l~~~g~~~~~p~~~~~~~-~----~~p~~---~~g~~~g~~~~~~~~ 344 (400)
T PRK11646 286 L------SMFPIG--MV---SN--LQQLFTLICLFYIGSIIAEPARETLSA-S----LADAR---ARGSYMGFSRLGLAL 344 (400)
T ss_pred H------HHHHHH--Hh---hh--HHHHHHHHHHHHHHHHHHHccHHHHHH-h----cCCcc---cchhhhhHHHHHHHH
Confidence 1 111111 11 11 112222223334333344333332222 2 45442 678888888888889
Q ss_pred HHHHhHHHHHHHHhhc
Q 010361 304 CEIAGASLFGILLSKY 319 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~ 319 (512)
...+||.++|.+++..
T Consensus 345 g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 345 GGAIGYIGGGWLFDLG 360 (400)
T ss_pred HHHhcccchHHHHHHH
Confidence 9999999999998864
No 176
>PRK10429 melibiose:sodium symporter; Provisional
Probab=95.95 E-value=0.058 Score=58.36 Aligned_cols=163 Identities=13% Similarity=0.004 Sum_probs=94.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAA 224 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~ 224 (512)
+|+.++.+....++...+..++.-..+.+.....++.-..+.+.....++.++..++.|.+.||++||++++.+-++..+
T Consensus 229 ~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 229 KNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVL 308 (473)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 77888888888888888887776555544444444444455666666678888899999999999999998766543221
Q ss_pred HHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCch----hHHHHHHHHHHHH
Q 010361 225 AQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRP----IALAKANAVLNRI 300 (512)
Q Consensus 225 ~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~----~~L~~aNs~l~~I 300 (512)
.+...++...... .. .+.+++..++.+.......... .++-.| +++.++- ..-.-..+...-+
T Consensus 309 ----~~~~~~~~~~~~~--~~--~~~~~i~~~l~g~~~~~~~~~~-~am~ad----~id~~e~~tG~R~~G~~~s~~~~~ 375 (473)
T PRK10429 309 ----SCGVLLLMGLAAP--HN--ALLIVIAGILLNIGTALFWVLQ-VIMVAD----TVDYGEYKLGIRCESIAYSVQTMV 375 (473)
T ss_pred ----HHHHHHHHhccCc--hh--HHHHHHHHHHHHHHHHHHHHHH-HHHHhh----hhhhhhHhcCccchhHHHHHHHHH
Confidence 1111111101111 11 1122223333444333333322 222223 4443200 0112256777778
Q ss_pred HHHHHHHhHHHHHHHHhhcc
Q 010361 301 DLLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 301 dl~~kilGP~lgGlL~s~~s 320 (512)
+.++.-+||.+.|.+++..|
T Consensus 376 ~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 376 VKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 88888999999999987654
No 177
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.93 E-value=3.2 Score=44.97 Aligned_cols=235 Identities=12% Similarity=0.064 Sum_probs=114.7
Q ss_pred HccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhccc
Q 010361 197 VGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERD 276 (512)
Q Consensus 197 l~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverd 276 (512)
.+-.+++-+-|..+.|++++..-+...+ .-.++++. .++ ...-+.-++-|. ..-+.+++- .
T Consensus 56 ~~l~~vflltd~l~Ykpviil~~~~~i~----t~~lll~~-------~sv--~~mq~~q~~yg~-~~a~evay~-----s 116 (412)
T PF01770_consen 56 AFLLPVFLLTDYLRYKPVIILQALSYII----TWLLLLFG-------TSV--LAMQLMQFFYGL-ATAAEVAYY-----S 116 (412)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHHHHHHH-------CcH--HHHHHHHHHHHH-HHHHHHHHH-----H
Confidence 3344555678999999998776544322 11222221 121 111111111111 112222332 2
Q ss_pred ceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccc
Q 010361 277 WAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS-GVLD 355 (512)
Q Consensus 277 WVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~-~~l~ 355 (512)
|+=..+++ ++-.++-+..|..-++++++|-++|=++++..+.... -.+. +.+.+....++..+++.+..+ ...+
T Consensus 117 Yiys~v~~---~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~-~L~~-isl~~~~~a~~~~~fLP~~~~S~~f~ 191 (412)
T PF01770_consen 117 YIYSVVDK---EHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYF-QLNY-ISLASVSLALLIALFLPMPKRSLFFH 191 (412)
T ss_pred HheeecCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHH-HHHHHHHHHHHHHHHcCCCCccccee
Confidence 33446665 4899999999999999999999999988885443221 1111 111112122222233333211 0011
Q ss_pred ccccc--------cccCCCCCC------CCCCCCcchhHHhHHHHHHhHhhhhcCcch-hHHHHHHHHHHHhhhhhhHHH
Q 010361 356 RAKCS--------QSCCRTSNE------GPVPDADNIVDVGIEAIKLGWKEYMQQPVL-PASLAYVLLCLNVVLTPGSLM 420 (512)
Q Consensus 356 ~~~~~--------~~~~~~~~~------~~~~~~~~~~~~~~~~i~eG~~~y~~qpvl-~asla~alL~~tvll~~~~l~ 420 (512)
+.++. .+...+.++ ++.+..+....+.++.+...++.-+++|.+ +-++-.++-... + .+.
T Consensus 192 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcg----y-~qv 266 (412)
T PF01770_consen 192 RKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCG----Y-YQV 266 (412)
T ss_pred ccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhH----H-HHH
Confidence 11100 000000000 001111223345566677777777888854 445543332211 0 123
Q ss_pred HHHHH----H---hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 421 TAFLT----Q---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 421 v~yl~----~---lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
..|.+ + .+-....-|.+.++..+.|-++++.++.+..+..
T Consensus 267 ~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~ 313 (412)
T PF01770_consen 267 INYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWD 313 (412)
T ss_pred HHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchH
Confidence 33332 1 2445667788889988888889999999844433
No 178
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=95.90 E-value=0.6 Score=49.66 Aligned_cols=75 Identities=12% Similarity=0.129 Sum_probs=47.7
Q ss_pred CCcchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHH
Q 010361 145 HPEGLYALYACCLAG-NLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLN 219 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS-~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~d 219 (512)
+++.++.+..+.++. .++-.....-+|.++....+ +.-.++.+.....+..++.++..|.+.||.+||+++...-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~ 316 (432)
T PRK10406 240 RNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFG 316 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 344444443333332 34333344456777766666 7666666666556666788899999999999998776543
No 179
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=95.89 E-value=0.32 Score=53.33 Aligned_cols=75 Identities=13% Similarity=0.175 Sum_probs=49.9
Q ss_pred CCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQL-WNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri-~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
++++.|++-.-.++ ++|.-+ ....+|.|....++. .......+...+...+..|.+|.+.||.+++|++...-++
T Consensus 250 k~~~~Wllslly~~-tFG~fvg~s~~lp~~~~~~~~~-~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~ 325 (462)
T PRK15034 250 QRLHLWLLSLLYLA-TFGSFIGFSAGFAMLAKTQFPD-VNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIF 325 (462)
T ss_pred CCCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHH
Confidence 55555554333333 444444 566889998887752 1122223445677888999999999999999998887654
No 180
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=95.88 E-value=0.72 Score=50.09 Aligned_cols=62 Identities=18% Similarity=0.045 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHH
Q 010361 159 GNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNT 220 (512)
Q Consensus 159 S~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dl 220 (512)
..++-.....-+|.++....+ +....+.+.....+..++..+..|.+.||++||++++...+
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 324 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSV 324 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 334444555567777766666 65555655556666777888899999999999998776653
No 181
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.84 E-value=0.065 Score=44.25 Aligned_cols=54 Identities=28% Similarity=0.332 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHH
Q 010361 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (512)
Q Consensus 416 ~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l 469 (512)
+-..+..|++++|+++.++|++.++.-+..++++.+.+++.+|.|..|..+.+.
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 334566677889999999999999999999999999999999999888765544
No 182
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=95.79 E-value=1 Score=47.79 Aligned_cols=157 Identities=13% Similarity=-0.021 Sum_probs=90.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.+.....+...+-..+....|.++.+.++ +....+..........++.+...+.+.+|..++|.+.....+..
T Consensus 216 ~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 295 (413)
T PRK15403 216 RNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQL 295 (413)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHH
Confidence 66777777777777777766777778999988887 88888877666666667778888888866555554433322211
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhh-hhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL-GVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~-~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
+ ...+......... +. .+..++..++.+....+..+.. ..+ | ...+ ...-++++..+.+..
T Consensus 296 i----g~~l~~~~~~~~~--~~--~~~~~~~~~l~~~G~~~~~p~~~~~a----l----~~~~--~~~G~a~a~~~~~~~ 357 (413)
T PRK15403 296 V----GLALLIVGNLLWP--HV--WLWSVLGTSLYAFGIGLIFPTLFRFT----L----FSNN--LPKGTVSASLNMVIL 357 (413)
T ss_pred H----HHHHHHHHHHHcc--cc--HHHHHHHHHHHHHHHHHHhHHHHHHH----h----ccCC--CCCcHHHHHHHHHHH
Confidence 1 1111111111111 11 1111223333333322322221 122 1 1111 135788999999999
Q ss_pred HHHHHhHHHHHHHHhhc
Q 010361 303 LCEIAGASLFGILLSKY 319 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~ 319 (512)
...-.|+.++|.+.+..
T Consensus 358 ~~~~~~~~~~g~~~~~~ 374 (413)
T PRK15403 358 MVMAVSVEIGRWLWFNG 374 (413)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999988763
No 183
>PRK10133 L-fucose transporter; Provisional
Probab=95.67 E-value=0.46 Score=51.12 Aligned_cols=152 Identities=5% Similarity=-0.111 Sum_probs=85.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAI-ALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~-~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
+++.++....+.++...++.....-.|.++ ...++ |....+.+-....+..++.....|.++||++||+++...-++.
T Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~ 335 (438)
T PRK10133 256 RIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIA 335 (438)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 456666655555555544442222345554 34567 8999998888888999999999999999999999887775432
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+ .+.... ..+ +. ..++...+..-+....+-+.+..+.+. .++ +-..+.+.+. ...
T Consensus 336 ~~------~~~~~~-~~~----~~--~~~~~~~l~glg~~~i~P~~~s~a~~~------~~~----~~~~as~l~~-~~~ 391 (438)
T PRK10133 336 MA------LCLISA-FAG----GH--VGLIALTLCSAFMSIQYPTIFSLGIKN------LGQ----DTKYGSSFIV-MTI 391 (438)
T ss_pred HH------HHHHHH-HcC----Ch--HHHHHHHHHHHHHHHHHHHHHHHHHcc------cch----hhccchhHHh-HHh
Confidence 11 111111 111 11 111122222222333444445455432 121 2334444443 444
Q ss_pred HHHHHhHHHHHHHHhhcc
Q 010361 303 LCEIAGASLFGILLSKYE 320 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s 320 (512)
....++|.+.|.+....|
T Consensus 392 ~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 392 IGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred ccchHHHHHHHHHHHhcc
Confidence 557888888888877655
No 184
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=95.67 E-value=1.5 Score=48.69 Aligned_cols=255 Identities=17% Similarity=0.117 Sum_probs=128.7
Q ss_pred ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHH-HHH
Q 010361 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLA 258 (512)
Q Consensus 180 Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~-~ll 258 (512)
+--+++..+.....-..+.||+++.+.||++.|++++.-.++..+..+++ .|+ . + .+.+++.. ++.
T Consensus 79 s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~ls----sF~--~-----~--i~~l~lt~gvi~ 145 (509)
T KOG2504|consen 79 SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLS----SFA--T-----S--LWQLYLTFGVIG 145 (509)
T ss_pred CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHH----HHH--h-----h--HHHHHHHHHHHh
Confidence 55556777766666778889999999999999999998877654321111 121 1 1 23333221 122
Q ss_pred HHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHH
Q 010361 259 GAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPV 338 (512)
Q Consensus 259 g~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s 338 (512)
|+...+ .++.++ ++++.=-+.+...||+.-....-+..++=|.+--.++..+|.......-..+. .+
T Consensus 146 G~G~~~---~~~pai------viv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~-l~--- 212 (509)
T KOG2504|consen 146 GLGLGL---IYLPAV------VILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS-LN--- 212 (509)
T ss_pred hccchh---hhcchh------hhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH-HH---
Confidence 221111 112211 12220001267788888887777777777777888887777654333222111 11
Q ss_pred HHHHHHHHHhhccccccc----------ccccccc-C-CCCCCCCCCCC---------cchhHHhHH--HHHHhH----h
Q 010361 339 MIILTWFTNKISSGVLDR----------AKCSQSC-C-RTSNEGPVPDA---------DNIVDVGIE--AIKLGW----K 391 (512)
Q Consensus 339 ~~ll~~~i~rv~~~~l~~----------~~~~~~~-~-~~~~~~~~~~~---------~~~~~~~~~--~i~eG~----~ 391 (512)
.++....++.+..+..+. ..+.... . +...+.+.+.. ....++.++ ..+... .
T Consensus 213 ~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 292 (509)
T KOG2504|consen 213 VLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDL 292 (509)
T ss_pred HHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhH
Confidence 111111222110000000 0000000 0 00000000000 000000011 112222 2
Q ss_pred hhhcCcchhHHHH-HHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhCh
Q 010361 392 EYMQQPVLPASLA-YVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (512)
Q Consensus 392 ~y~~qpvl~asla-~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~ 461 (512)
.++++|.++-... ..+.++.. ..+....+.|.++.|+++.......++.++..+.|=++.+++..+...
T Consensus 293 ~ll~~~~fl~~~~~~~~~~~g~-~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~ 362 (509)
T KOG2504|consen 293 SLLKDPKFLLLALSNLFAYLGF-NVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGI 362 (509)
T ss_pred HHHcCchHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcccc
Confidence 5677776655322 22222222 123345666777899999999999999999999999999999887763
No 185
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=95.59 E-value=1.9 Score=47.23 Aligned_cols=60 Identities=22% Similarity=0.145 Sum_probs=43.8
Q ss_pred HHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHh
Q 010361 424 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW 484 (512)
Q Consensus 424 l~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~~L~~~v~~f~ 484 (512)
.+..|.+... -..--.-++..+++++++..+.+|+|..+..+++...+.+|+.+....+.
T Consensus 322 f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~ 381 (513)
T KOG0254|consen 322 FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGV 381 (513)
T ss_pred HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3456777554 33444455556678888899999999999999999999998876655443
No 186
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=95.56 E-value=0.34 Score=51.40 Aligned_cols=153 Identities=12% Similarity=0.055 Sum_probs=89.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHH-HHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALL-HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAY-ICLNTVQA 223 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l-~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vm-i~~dlvq~ 223 (512)
+.++......++-..+-.....-+|.++... .+ |...++.+.....+..++.....|.+.||.+||+.. ...-+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~- 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFA- 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHH-
Confidence 4455566666666666666677788888774 34 778888888888888889999999999999877643 3222211
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLL 303 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~ 303 (512)
.+.+++. ... .. ....+..+.+.................+ ..+. ++...+++.......+
T Consensus 321 -----~~~~~~~---~~~--~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~---~~~~~a~g~~~~~~~~ 380 (412)
T TIGR02332 321 -----AAGWLLA---SAT--DH---NLIQLLGIIMASMGSFSAMAIFWTTPDQ----SISL---QARAIAIAVINATGNI 380 (412)
T ss_pred -----HHHHHHH---Hhc--CC---HHHHHHHHHHHHHHhhhhhhHHHhhccc----ccch---HHHHHHHHHHHHhhhh
Confidence 1111111 111 11 1111111111111111111111111111 2232 3788899999999999
Q ss_pred HHHHhHHHHHHHHhhcc
Q 010361 304 CEIAGASLFGILLSKYE 320 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~s 320 (512)
+.++||.+.|.+....+
T Consensus 381 g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 381 GSALSPFLIGILKDATG 397 (412)
T ss_pred hhhhhhhhcccccccCC
Confidence 99999999999988654
No 187
>PRK11043 putative transporter; Provisional
Probab=95.30 E-value=1.5 Score=45.68 Aligned_cols=154 Identities=16% Similarity=0.081 Sum_probs=81.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
+++.++.+.....+...+-..+....|.+... .+ +....++......+..++.+...|.+.||++||+.+...-+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~ 279 (401)
T PRK11043 201 KSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFA 279 (401)
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 34445443333333333334445556777654 45 77777776666666777777888899999999987765544432
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHH-HhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERL-TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l-~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
+. ...+..... ... .+ .+.+++...+.+..... .......+.+ ..+ ++..++++....+..
T Consensus 280 ~~---~~~~~~~~~-~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----~~~g~~~g~~~~~~~ 341 (401)
T PRK11043 280 VS---VIAIWLASL-LSH--PS--LVPLLIPFCVMAAANGAIYPIVVAQALR------PFP----QATGKAAALQNTLQL 341 (401)
T ss_pred HH---HHHHHHHHH-hcc--Cc--HHHHHHHHHHHHHHHHHHHHHHHHHHhh------hCc----ccChHHHHHHHHHHH
Confidence 21 111111111 111 11 11222222222322222 2222222222 112 256788888888888
Q ss_pred HHHHHhHHHHHHHHh
Q 010361 303 LCEIAGASLFGILLS 317 (512)
Q Consensus 303 ~~kilGP~lgGlL~s 317 (512)
.....+|.++|.+..
T Consensus 342 ~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 342 GLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHccC
Confidence 777788888887765
No 188
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=95.28 E-value=5.1 Score=42.89 Aligned_cols=258 Identities=17% Similarity=0.153 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHH---HccccceeeecccCChhHHHHHHHHHHHH
Q 010361 150 YALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILI---VGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 150 ~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~l---l~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
..+..+=.+-.++=|----+++-++-.+-+ .-+-.+..++.+++|.+ +++|++..+.-|+.-.|.+..+-++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Lll---- 86 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLL---- 86 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHH----
Confidence 455666666666667666666666655554 33445555666666664 5677888888888777666555432
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
+..+.++-. . .+ .+.+|.-..+.|+.-.+.++-.-. ++++|-+++....-+.-...=.++.
T Consensus 87 --i~~G~~iR~--~----~~--~~~L~~gt~l~G~gIav~nVLLPs---------lIK~~Fpk~~~~mtglYs~sl~~~a 147 (395)
T COG2807 87 --IAAGILIRS--L----GG--LPLLFLGTLLAGAGIAVINVLLPS---------LIKRDFPKRVGLMTGLYSTSLGAGA 147 (395)
T ss_pred --HHHHHHHHh--c----cc--HHHHHHHHHHHHhhHHHHHHhhhH---------HHHhhcccchhhHHhHHHHHHHHHH
Confidence 111221111 0 11 234555555555544444433333 3333222233222222222222222
Q ss_pred HHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCcchhHHhHHH
Q 010361 306 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA 385 (512)
Q Consensus 306 ilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll~~~i~rv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (512)
-+|+.+.--+-+..+. .-..+..|..+........+.. ..+.+... . . ..++..
T Consensus 148 aLaa~lavpla~~~~g-----W~~aL~~WAl~allAl~~WlPq-----~~r~~~~~--~-----~---~~~~~~------ 201 (395)
T COG2807 148 ALAAALAVPLAQHSGG-----WRGALGFWALLALLALLIWLPQ-----ALREQAAS--I-----A---TKLVSV------ 201 (395)
T ss_pred HHHhhhhhHHHHhhcc-----HHHHHHHHHHHHHHHHHHHhhh-----cccccccc--c-----c---cccccc------
Confidence 3333333333332211 0111223333332221112111 01110000 0 0 000000
Q ss_pred HHHhHhhhhcCcchhHHHHH----HHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhCh
Q 010361 386 IKLGWKEYMQQPVLPASLAY----VLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 461 (512)
Q Consensus 386 i~eG~~~y~~qpvl~asla~----alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~ 461 (512)
+-+||+|.-.....+ +.+|+++ -+=++.++.++|+|+.+-|.+.+...+.++..++..|.+.+|..-
T Consensus 202 -----~~vw~~~~aW~vtLfmGlqS~~~Y~~----~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n 272 (395)
T COG2807 202 -----RKVWRSPLAWQVTLFMGLQSLLYYIV----IGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKN 272 (395)
T ss_pred -----cccccCchhHHHHHHHHhhHHHHHHH----HHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 124677744433222 3444443 134677778999999999999999999999999999999998765
Q ss_pred hhHH
Q 010361 462 LKAG 465 (512)
Q Consensus 462 ~rag 465 (512)
.|-.
T Consensus 273 ~r~~ 276 (395)
T COG2807 273 QRPL 276 (395)
T ss_pred cchH
Confidence 5543
No 189
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=95.11 E-value=0.92 Score=48.99 Aligned_cols=160 Identities=14% Similarity=0.058 Sum_probs=99.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++++.|+|..=++..-=+---....+|.|..+.++ +....+.+++...++..+.=|.+|.+.||++.+|++...-.+-+
T Consensus 216 ~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~ 295 (417)
T COG2223 216 SNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMA 295 (417)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHH
Confidence 45555554433333333333456789999999999 99999999999999999999999999999999988766544322
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHH-HHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v-~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
+. . .+ ..+......... ....+.. .+.+. .+....+.... | ++|.+-++ +.-.++.....+--
T Consensus 296 ~~---~-~~--l~~~~~~~~~~~-~~~~~~~~~l~l~---~~~G~GnGsvf-k-~Ip~if~~----~~G~v~G~vga~G~ 359 (417)
T COG2223 296 LA---A-AL--LSLFLTGFGHGG-SFVVFVAVFLALF---VFAGLGNGSVF-K-MIPVIFPK----ETGAVTGIVGAIGG 359 (417)
T ss_pred HH---H-HH--HHccccccccCc-chHHHHHHHHHHH---HHhccCcchhe-e-echHHHHh----hhhHHHHHHHHhcc
Confidence 11 1 11 111111000011 1112222 22233 34444555444 3 57776553 56777777777777
Q ss_pred HHHHHhHHHHHHHHhhcc
Q 010361 303 LCEIAGASLFGILLSKYE 320 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s 320 (512)
+..+.=|...|..+...+
T Consensus 360 lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 360 LGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred ccccchhHHHHHHHHhcc
Confidence 777777888898888766
No 190
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=95.08 E-value=1.3 Score=45.52 Aligned_cols=155 Identities=11% Similarity=-0.056 Sum_probs=88.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALL--HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l--~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
+++.++....+.++-.-++....--.+.|+.+. .+ +....+.+........++-....+.++||++++|+++.+-+.
T Consensus 138 ~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l 217 (310)
T TIGR01272 138 QFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFL 217 (310)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 445555555555554444544444467777654 46 788888888888888888888999999999999987766543
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHH-HHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHH
Q 010361 222 QAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAV-ERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRI 300 (512)
Q Consensus 222 q~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i-~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~I 300 (512)
..+. ..+ .. .. .+. ..++.+. +.|.. +..+......+.+. .++ +-.++.+.+ ..
T Consensus 218 ~~~~----~~l--~~--~~---~~~--~~~~~~~-l~g~~~s~i~P~~~s~a~~~------~~~----~~~~asai~-~~ 272 (310)
T TIGR01272 218 AVLL----SIG--AA--LT---HGY--VAMWFVL-ALGLFNSIMFPTIFSLALNA------LGR----HTSQGSGIL-CL 272 (310)
T ss_pred HHHH----HHH--HH--Hc---CCH--HHHHHHH-HHHHHHHHHHHHHHHHHHhh------hhh----hhhhhHHHH-HH
Confidence 3221 111 11 11 111 1122222 22322 33333334333321 111 333444444 55
Q ss_pred HHHHHHHhHHHHHHHHhhcchhhH
Q 010361 301 DLLCEIAGASLFGILLSKYEPVTC 324 (512)
Q Consensus 301 dl~~kilGP~lgGlL~s~~s~~~~ 324 (512)
..+...++|.+.|.+.+..+...+
T Consensus 273 ~~~Gg~i~P~l~G~lad~~g~~~a 296 (310)
T TIGR01272 273 AIVGGAIVPLLQGSLADCLGIQLA 296 (310)
T ss_pred HHhcchHHHHHHHHHHHhccchHH
Confidence 666788999999999887765443
No 191
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=94.85 E-value=0.6 Score=50.66 Aligned_cols=68 Identities=16% Similarity=-0.034 Sum_probs=48.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCCh
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRI 212 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr 212 (512)
+++.++.++...++..........-+|.++....+ +...++.+.....+..++..+..|.+.||++||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 250 TNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 34456666665544433333333446777777777 888888888888888899999999999999876
No 192
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.78 E-value=0.98 Score=52.09 Aligned_cols=106 Identities=11% Similarity=0.208 Sum_probs=79.3
Q ss_pred HhHHHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHH-HHHHHHHHHHHh
Q 010361 381 VGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGV-AATFLSAYLVRR 458 (512)
Q Consensus 381 ~~~~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGL-lGt~lap~L~rR 458 (512)
+..+|+..-++-++++|++.-.+....+...++.++.+.+.-|+.+ -|.+++..-.+.|..++.+. +|.++.++++||
T Consensus 376 ~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikk 455 (735)
T KOG3626|consen 376 KKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKK 455 (735)
T ss_pred hhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeee
Confidence 3456777788889999998876666566655546777788889985 59999999999988888877 699999999998
Q ss_pred hChh--hHHHHHHHHHHHHHHHHHHHHhcC
Q 010361 459 LGIL--KAGAAGLIFQASLLAMAVAVYWSG 486 (512)
Q Consensus 459 lG~~--ragl~~l~~Q~~~L~~~v~~f~~g 486 (512)
+.+. .+..|.++.-.+++..-+..|..|
T Consensus 456 fkl~~r~~a~~~~~~~~l~l~~~~~~~~ig 485 (735)
T KOG3626|consen 456 FKLSARGAAKFVIVCSVLSLLFYSLLFFIG 485 (735)
T ss_pred ecccHHHHHHHHHHHHHHHHHHHHHHHEec
Confidence 8754 555666665555555545555555
No 193
>PRK11462 putative transporter; Provisional
Probab=94.75 E-value=0.79 Score=49.70 Aligned_cols=76 Identities=9% Similarity=-0.053 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHH
Q 010361 144 AHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLN 219 (512)
Q Consensus 144 ~~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~d 219 (512)
.+|+.++.+....++..++..+......-+.....+..-..+.+.....++.++..+++|.++||++||+++...-
T Consensus 225 ~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~ 300 (460)
T PRK11462 225 WQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN 300 (460)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 4788888888888888888888877766666666664333455556667788888899999999999998876544
No 194
>PTZ00207 hypothetical protein; Provisional
Probab=94.11 E-value=13 Score=42.21 Aligned_cols=152 Identities=12% Similarity=-0.012 Sum_probs=83.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 146 PEGLYALYACCLAGNLVEQLWNFAW--PSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 146 ~r~f~~L~~g~~lS~~Gdri~~FAl--pL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
.+.+..+.++-.+.....-.+.|.+ |-+ ..-++ |..+++...... ...-.+.++.|.+.||++||+++..+-+.-
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L-~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFMYAFNLISGAM-QARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3445556555555554444444433 433 34445 766666665543 334456768899999999999998887654
Q ss_pred HHHHHHHHHHHHHHHhhccc-CCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPT-SSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRID 301 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~-~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Id 301 (512)
.+. ..+ ..+..... ..+ .+.+++..++.|..+..+.++....+. +|.| + +-..+.+.+....
T Consensus 102 ~iG----~ll--~ala~~~~i~~s--~~~l~l~r~l~G~G~~~~~~~~~~~i~-~~Fp----~----~RG~a~Gi~~~~~ 164 (591)
T PTZ00207 102 CLG----TLL--FALTFQEVIEGS--VVRLSVYNGLMTLGCMLFDLGAVVTVL-SVFP----S----NRGAVVAIMKTFT 164 (591)
T ss_pred HHH----HHH--HHHHhcccccCc--HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCh----h----hhHHHHHHHHHHH
Confidence 322 111 11111100 011 223344444556555555555555553 4655 2 2366777777777
Q ss_pred HHHH-HHhHHHHHHHH
Q 010361 302 LLCE-IAGASLFGILL 316 (512)
Q Consensus 302 l~~k-ilGP~lgGlL~ 316 (512)
.++. +++|+..+++.
T Consensus 165 gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 165 GLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7765 45666666554
No 195
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=93.70 E-value=14 Score=41.06 Aligned_cols=168 Identities=11% Similarity=0.057 Sum_probs=95.8
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------ChhHHHHHHHHHHHHHHHccccceeeeccc-CChhH
Q 010361 142 TPAHPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP------SLLPVAVMGFFSKLILIVGGPLVGKLMDHS-PRIPA 214 (512)
Q Consensus 142 ~~~~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~------Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~-~Rr~v 214 (512)
...|||.++.+..-++--.|+=.=-+--+-+|+..-.+ .--..+++++...+.++ ...++|.++||+ ++||.
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~-t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYL-TPIIGGWLADRVLGTRRT 94 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHH-HHHHHHHHHHHhcchhHH
Confidence 34489999999877776666555555555555544332 23344555555555443 356788999998 56665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHH
Q 010361 215 YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKAN 294 (512)
Q Consensus 215 mi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aN 294 (512)
+.+.-++ ..++-+.. ..... .+ ...+++.+.+.++...++..-....+- | +-+++++ ++..++
T Consensus 95 I~lGail------~~iGh~~L--~~~~~-~~--~~gl~i~L~~I~iG~Gl~K~NiS~llg-~----ly~~~Dp-rrD~gF 157 (498)
T COG3104 95 IVLGAIL------MAIGHLVL--AISSV-SG--PGGLYIGLALIIVGTGLFKPNISSLLG-E----LYPKDDP-RRDGGF 157 (498)
T ss_pred HHHHHHH------HHHHHHHH--hcccc-cc--ccHHHHHHHHHHhccccccccHHHHHH-H----hcCCCCc-ccCCCc
Confidence 5444322 11121111 11100 11 123455555555555554442222221 1 3344444 688888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHH
Q 010361 295 AVLNRIDLLCEIAGASLFGILLSKYEPVTCLKF 327 (512)
Q Consensus 295 s~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~ 327 (512)
+..-..+.+..+++|.+.|.+-...+-+.+...
T Consensus 158 t~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~ 190 (498)
T COG3104 158 TLFYMGINIGSLIAPIITGLLAINYGWHVGFGL 190 (498)
T ss_pred cEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 888888889999999999999888875444333
No 196
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.70 E-value=4.7 Score=37.78 Aligned_cols=149 Identities=21% Similarity=0.102 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCh--hHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHH
Q 010361 152 LYACCLAGNLVEQLWNFAWPSAIALLHPSL--LPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLS 229 (512)
Q Consensus 152 L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sl--l~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls 229 (512)
++.+.+.+.++...+....+.+......+. ...+.......+...+..++.|.+.||++||+.+...... . ...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--~--~~~ 82 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLL--F--LLG 82 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHH--H--HHH
Confidence 677777788888899999999988887644 4667777777788888889999999999888666665533 1 111
Q ss_pred HHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHH-HHHHHHHHh
Q 010361 230 AAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR-IDLLCEIAG 308 (512)
Q Consensus 230 ~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~-Idl~~kilG 308 (512)
..+ ..+.. . .....+.+..+..|.......+.....+ .+|.|. . + +....++.... .-....++|
T Consensus 83 ~~~--~~~~~----~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~--~-~---~~~~~~~~~~~~~~~~~~~~~ 148 (338)
T COG0477 83 TLL--LALAP----N-VGLALLLILRLLQGLGGGGLLPVASALL-SEWFPE--A-T---ERGLAVGLVTLGAGALGLALG 148 (338)
T ss_pred HHH--HHhCc----c-chHHHHHHHHHHHHhhhHHHHHHHHHHH-HHhcCc--h-h---HHHHHHHHHHHHHHHHHHHHH
Confidence 111 11111 1 0011222222223444443333333322 344333 1 1 45555555555 466677888
Q ss_pred HHHHHHHHhh
Q 010361 309 ASLFGILLSK 318 (512)
Q Consensus 309 P~lgGlL~s~ 318 (512)
|.+++.+...
T Consensus 149 ~~~~~~~~~~ 158 (338)
T COG0477 149 PLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHH
Confidence 8888777665
No 197
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=93.44 E-value=0.93 Score=49.79 Aligned_cols=157 Identities=13% Similarity=0.100 Sum_probs=99.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCCh-----hHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRI-----PAYICL 218 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr-----~vmi~~ 218 (512)
..+.++..|.+|+.-+|+-.+...=.|.|+-++.+ +....|.+...=.+...++...+|.+.||..+| .+++..
T Consensus 256 ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkif 335 (466)
T KOG2532|consen 256 TSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIF 335 (466)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHH
Confidence 45678999999999999999999999999999999 999999998888888899999999999999875 122222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHH
Q 010361 219 NTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLN 298 (512)
Q Consensus 219 dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~ 298 (512)
+ .++....+..++..-..+. ... +...+.+.+.-+...+....+..... | .++ .+-.-..+..+
T Consensus 336 n---~i~~~~~ai~l~~l~~~~~-~~~---~~a~~~l~~~~~~~g~~~~Gf~~~~~-~----~ap----q~a~~l~g~~~ 399 (466)
T KOG2532|consen 336 N---TIAFGGPAVFLLVLAFTSD-EHR---LLAVILLTIAIGLSGFNISGFYKNHQ-D----IAP----QHAGFVMGIIN 399 (466)
T ss_pred H---hHHHHHHHHHHHeeeecCC-Ccc---hHHHHHHHHHHHHcccchhhhHhhhh-h----ccc----hHHHHHHHHHH
Confidence 2 2222222222111101111 111 00111111112222222222222210 1 022 26777888888
Q ss_pred HHHHHHHHHhHHHHHHHHh
Q 010361 299 RIDLLCEIAGASLFGILLS 317 (512)
Q Consensus 299 ~Idl~~kilGP~lgGlL~s 317 (512)
.+..++.+++|.+.|.+..
T Consensus 400 ~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 400 FVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred HHHHHHHHHHHHheeeEeC
Confidence 8889999999999999985
No 198
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=93.41 E-value=3.4 Score=42.86 Aligned_cols=67 Identities=6% Similarity=-0.003 Sum_probs=48.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCC
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPR 211 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~R 211 (512)
+++.++.+...-+....+-..++.-.|.+..+..+ +....+++........++.+..+|++.||.+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 205 SNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556665555566666666666667777777777 88888888777777777788888889998874
No 199
>TIGR00901 2A0125 AmpG-related permease.
Probab=93.32 E-value=1.5 Score=44.84 Aligned_cols=74 Identities=19% Similarity=0.077 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHH-HHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 149 LYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFF-SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 149 f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~-~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++.+....++-.++......-.|.++.+ .+ +.-.++..... ..+..++..+.+|.+.||++||+.++.+-++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~ 286 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQA 286 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 5556666666666666666677888877 56 77777755543 345677888889999999999988777666543
No 200
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=93.29 E-value=3 Score=46.16 Aligned_cols=144 Identities=13% Similarity=0.020 Sum_probs=74.7
Q ss_pred HHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHH
Q 010361 173 AIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPW 251 (512)
Q Consensus 173 ~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l 251 (512)
.+..-.+ +.-.+....+......++....+..++||.+||++++.+-.+.++. .+.+.+....... .+ .+..
T Consensus 295 ~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~---~~~~~~~~~l~~~--~~--~~~~ 367 (485)
T KOG0569|consen 295 SIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVA---LLLMSIALFLSNS--FG--SWLS 367 (485)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH---HHHHHHHHHHHHH--hh--hHHH
Confidence 3333345 5555566666677777888888999999999999999988766553 1122112111111 11 1233
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHH
Q 010361 252 FFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKF 327 (512)
Q Consensus 252 ~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~ 327 (512)
|..++..-.....+...-+. ++-=....+++.+ ....+.+......-+++++=....=.+...+|+...+.|
T Consensus 368 y~~i~~~~~~~~~f~~G~gp-i~~fi~aELf~~~---~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF 439 (485)
T KOG0569|consen 368 YLCIAAIFLFIISFAIGPGP-IPWFIGAELFPQS---ARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILF 439 (485)
T ss_pred HHHHHHHHHHHHhhhcCCCc-hhHHHHHHhCCcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 33222111111122222111 1101112255543 566677777766666666655555555666666433333
No 201
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=93.22 E-value=16 Score=40.28 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=52.2
Q ss_pred HHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHH---HHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 386 IKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL---TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 386 i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl---~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
..++.+-.++++-|.-.+..-.+++. .|.++.+..- .-.|++...-|..-..+.++|++|+++++.+..|.+-.
T Consensus 255 f~~si~~~~~n~~F~il~~~ygi~~g---~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 255 FPKSIKSCFKNRQFIILAICYGIGLG---LFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred HHHHHHHHHcCccHHHHHHHHhhhHH---HHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 56777777787765443322233332 2444444433 23688888899999999999999999999999887755
Q ss_pred hH
Q 010361 463 KA 464 (512)
Q Consensus 463 ra 464 (512)
|.
T Consensus 332 k~ 333 (480)
T KOG2563|consen 332 KL 333 (480)
T ss_pred HH
Confidence 43
No 202
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=93.15 E-value=3.9 Score=43.53 Aligned_cols=116 Identities=12% Similarity=-0.049 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHH
Q 010361 184 VAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVER 263 (512)
Q Consensus 184 vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~ 263 (512)
.+.......+..++..+..|.++||++||++++..-++..+. ..++... .... ... ... ...+++.+....
T Consensus 308 ~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~----~~~l~~~-~~~~-~~~--~~~-~~~~~~~~~~~~ 378 (479)
T PRK10077 308 ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIG----MFSLGTA-FYTQ-APG--IVA-LLSMLFYVAAFA 378 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHH----HHHHHHH-HhcC-ccc--HHH-HHHHHHHHHHHh
Confidence 344444556667788899999999999999998877654332 1111111 0111 011 011 111111111111
Q ss_pred H-HhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 010361 264 L-TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL 316 (512)
Q Consensus 264 l-~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~ 316 (512)
. ..+... .++..+.+. ++-..+++....+..++.++||.+.+.+.
T Consensus 379 ~~~~~~~~-----~~~~e~~p~---~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 379 MSWGPVCW-----VLLSEIFPN---AIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred ccccchhH-----HHhHhhCCh---hHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 1 111111 122334443 36788999999999999988877666544
No 203
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=92.96 E-value=0.26 Score=53.23 Aligned_cols=69 Identities=20% Similarity=0.168 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHH
Q 010361 402 SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF 471 (512)
Q Consensus 402 sla~alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~ 471 (512)
+..+.+.|++. ..+.+....|+.+ .|++++++|.+.+++++..++.-.+++.+..|+|..|..++.+..
T Consensus 13 s~~~f~~Ff~~-gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~ 82 (412)
T PF01306_consen 13 SLFYFFYFFIW-GIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAI 82 (412)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHH
Confidence 33343444443 4566678888886 899999999999999999999999999999999999998877653
No 204
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=92.46 E-value=6.3 Score=41.43 Aligned_cols=147 Identities=13% Similarity=-0.013 Sum_probs=77.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChh---H-HHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIP---A-YICLN 219 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~---v-mi~~d 219 (512)
+++.++.++...++...+......=+|.++.. .+ +.. .+.+. .++.+.-..-.|.+.||.+||+ . ++..-
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~---~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~ 264 (368)
T TIGR00903 190 GRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAV---ALAILAGLIGVAVIPDRVARAGLRSIYIRAAA 264 (368)
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHH---HHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHH
Confidence 67788888888888877777666667888855 44 532 34333 3343333333577788877653 2 21111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHH
Q 010361 220 TVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNR 299 (512)
Q Consensus 220 lvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~ 299 (512)
++ ..+.+.... .. .+. ...++...+.+......... ..++..| +.++ +....+.+....
T Consensus 265 ~~------~a~~~~~~~--~~---~~~--~~~~~~~~l~~~~~~~~~~~-~~~~~~~----~~p~---~~rgt~~G~~~~ 323 (368)
T TIGR00903 265 LL------IAAFFLALA--FE---LNR--LALFAFIGIAGLLMLPAYAI-IMDWIGK----FCDK---ELHGKAAGAIGF 323 (368)
T ss_pred HH------HHHHHHHHH--Hc---ccc--HHHHHHHHHHHHhhhhhHHH-HHHHHHH----hcch---hhcCcccchhhH
Confidence 11 111111111 11 111 11111111122111111111 1122223 5554 367888999999
Q ss_pred HHHHHHHHhHHHHHHHHh
Q 010361 300 IDLLCEIAGASLFGILLS 317 (512)
Q Consensus 300 Idl~~kilGP~lgGlL~s 317 (512)
+..+..+++|.+.|.+++
T Consensus 324 ~g~~~~~~~~~~~~~~~~ 341 (368)
T TIGR00903 324 TSRAISVALALAAMLFIS 341 (368)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998884
No 205
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.32 E-value=3.3 Score=43.27 Aligned_cols=152 Identities=15% Similarity=0.075 Sum_probs=88.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
+.||.+.+=+.+=-..--=+----|.+...-++ |....+-..........+++|.-|.++|+++|+-..+.+-..-.
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~t-- 341 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILT-- 341 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHH--
Confidence 447776655544322211111122444555567 76666655555566668899999999999999876655542211
Q ss_pred HHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHH
Q 010361 226 QLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 305 (512)
Q Consensus 226 v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~k 305 (512)
+++=.++.+ +. + .+ |+.+.++|..-.+-.-+.-.. |+.++++ +||-.+-+.++.|+...-
T Consensus 342 -l~~H~~l~F--t~-------l-sP-y~~m~~lGLsysllAcslWP~-----va~~vpE---~qLGTaygf~qsIqNLgl 401 (459)
T KOG4686|consen 342 -LLGHSGLFF--TF-------L-SP-YTSMTFLGLSYSLLACSLWPC-----VASLVPE---EQLGTAYGFIQSIQNLGL 401 (459)
T ss_pred -HHHhhhHHh--hh-------c-cH-HHHHHHHhhhHHHHHHHHhhh-----hhhhCCH---HHhcchHHHHHHHHhhhh
Confidence 111111111 11 1 12 444444443333321111121 4457776 499999999999999999
Q ss_pred HHhHHHHHHHHhhcc
Q 010361 306 IAGASLFGILLSKYE 320 (512)
Q Consensus 306 ilGP~lgGlL~s~~s 320 (512)
-+-|+++|++...-|
T Consensus 402 a~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 402 AFIPIIAGFIADGDG 416 (459)
T ss_pred hHHhhhhheeecCCC
Confidence 999999999977554
No 206
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.24 E-value=21 Score=39.38 Aligned_cols=85 Identities=18% Similarity=0.168 Sum_probs=51.7
Q ss_pred HHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcc----hhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 010361 385 AIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPS----IIGGFSGLCASMGVAATFLSAYLVRRLG 460 (512)
Q Consensus 385 ~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~----~iG~~~g~gavgGLlGt~lap~L~rRlG 460 (512)
.+.||+++.+++|.++....+.++|..+.--.....-..++++.-++. ..|-+...-++..++--++.+++.||+|
T Consensus 252 ~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G 331 (472)
T TIGR00769 252 STMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG 331 (472)
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 578999999999998887666666643311122233333444443443 4444444545555555556699999999
Q ss_pred hhhHHHHHH
Q 010361 461 ILKAGAAGL 469 (512)
Q Consensus 461 ~~ragl~~l 469 (512)
-..+.+..-
T Consensus 332 w~~~a~i~P 340 (472)
T TIGR00769 332 WLTAALITP 340 (472)
T ss_pred HHHHHHHHH
Confidence 876655444
No 207
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=91.60 E-value=1.6 Score=46.85 Aligned_cols=56 Identities=16% Similarity=0.177 Sum_probs=46.1
Q ss_pred HHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhh
Q 010361 408 LCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK 463 (512)
Q Consensus 408 L~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~r 463 (512)
+++.+...+-..+.+|+++.|+|+.++|++.+++.+..+++..+.+.+.+|.+..+
T Consensus 13 ~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~ 68 (400)
T PF03825_consen 13 LYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAK 68 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 33333245666788899999999999999999999999999999999999986443
No 208
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=91.51 E-value=1.1 Score=48.73 Aligned_cols=59 Identities=17% Similarity=0.121 Sum_probs=50.5
Q ss_pred hhHHHHHHHHH---hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh-hChhhHHHHHHHHHHH
Q 010361 416 PGSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQAS 474 (512)
Q Consensus 416 ~~~l~v~yl~~---lGls~~~iG~~~g~gavgGLlGt~lap~L~rR-lG~~ragl~~l~~Q~~ 474 (512)
..+.++.|+.+ +|+++.+.|.+.+...+++.++.++.+++..| +|..|+..++.....+
T Consensus 29 ~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 29 MQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 34578888875 79999999999999999999999999999998 8999998887765443
No 209
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=91.31 E-value=1.5 Score=44.60 Aligned_cols=59 Identities=17% Similarity=0.313 Sum_probs=48.3
Q ss_pred hhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHH
Q 010361 415 TPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQA 473 (512)
Q Consensus 415 ~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~ 473 (512)
.+..+.+.|++ +.|+++.++|++.+...++..++.++.+++.+|+|..+...++.....
T Consensus 19 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 78 (366)
T TIGR00886 19 AFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLA 78 (366)
T ss_pred HhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 34455554454 689999999999999999999999999999999999988766655433
No 210
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=91.26 E-value=0.06 Score=60.03 Aligned_cols=104 Identities=15% Similarity=0.284 Sum_probs=0.0
Q ss_pred hHHHHHHhHhhhhcCcchhHHHHH-HHHHHHhhhhhhHHHHHHHHH-hCCCcchhHHHHHHHHH-HHHHHHHHHHHHHHh
Q 010361 382 GIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCAS-MGVAATFLSAYLVRR 458 (512)
Q Consensus 382 ~~~~i~eG~~~y~~qpvl~asla~-alL~~tvll~~~~l~v~yl~~-lGls~~~iG~~~g~gav-gGLlGt~lap~L~rR 458 (512)
..+++....+.++++|++.-.... +.-.+.+ .++.+.++-|+.+ -+++++.-..+.|+..+ ++.+|.++.+.++||
T Consensus 290 ~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~-~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk 368 (539)
T PF03137_consen 290 SIKDFPKALKRLLTNPVFMCLILAGVFESFIV-SGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKK 368 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhHHHHHHHHhcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEE
Confidence 445666677888999988775443 3444433 6787888899985 59999998888877776 556899999999999
Q ss_pred hChh--hHHHHHHHHHHHHHHHHHHHHhcC
Q 010361 459 LGIL--KAGAAGLIFQASLLAMAVAVYWSG 486 (512)
Q Consensus 459 lG~~--ragl~~l~~Q~~~L~~~v~~f~~g 486 (512)
+++. ++..+.+..+.+++..-...|+.+
T Consensus 369 ~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~ 398 (539)
T PF03137_consen 369 FKLSARGAAKFCIVVSIVSVILYSPLFFLG 398 (539)
T ss_dssp ------------------------------
T ss_pred ecCcHHHHHHHHHHHHHHHHHHHHHHHeec
Confidence 8765 344444444444433323344333
No 211
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=90.55 E-value=3.7 Score=44.68 Aligned_cols=155 Identities=12% Similarity=-0.008 Sum_probs=100.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQA 223 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~ 223 (512)
++++..++.++.++=+=|-..-.---..|....++ |-..+.+++.+..+-.++.+..+|.+.||++-|+++....++
T Consensus 250 ~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi-- 327 (438)
T COG2270 250 GRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI-- 327 (438)
T ss_pred cccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH--
Confidence 55678887777776554433333333455566777 899999999999999999999999999999988776665542
Q ss_pred HHHHHHHHHHHHHHhhcccCCCchhHHHHHH-HHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 224 AAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 224 ~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v-~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+.+. ++...... . .-|+. .++.|. +.-.. .|..|+|.-.+++++ +=.+.=+.-...+.
T Consensus 328 ----~~~~~-~~~~~~~~---~----~~f~i~gll~g~----s~G~~-qA~SRSy~~~lvp~~---k~~~fFglyaltgr 387 (438)
T COG2270 328 ----LSIAA-LYLIFLEG---E----LDFWILGLLVGT----SLGGA-QASSRSYLARLVPKG---KEGRFFGLYALTGR 387 (438)
T ss_pred ----HHHHH-HHHHHccc---c----HHHHHHHHHHHH----hcchH-HHHHHHHHHHhCCCc---cccceeehhhhhhh
Confidence 22222 12222221 1 11222 222222 11112 355678888888875 34455566667788
Q ss_pred HHHHHhHHHHHHHHhhcch
Q 010361 303 LCEIAGASLFGILLSKYEP 321 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s~ 321 (512)
.+.+.||.+.|.+.+..+-
T Consensus 388 a~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 388 AASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 8999999999999987654
No 212
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=89.87 E-value=4.2 Score=43.31 Aligned_cols=56 Identities=13% Similarity=0.042 Sum_probs=47.3
Q ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHH
Q 010361 419 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS 474 (512)
Q Consensus 419 l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~ 474 (512)
+.+.+..+.|+++.+.|++.+...++.++++...+++.+|+|.+|+...++....+
T Consensus 25 l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~ 80 (410)
T TIGR00885 25 MVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYAL 80 (410)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 34444345899999999999999999999999999999999999988887765443
No 213
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=89.74 E-value=2 Score=36.36 Aligned_cols=61 Identities=18% Similarity=0.113 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHH
Q 010361 416 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLL 476 (512)
Q Consensus 416 ~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~~L 476 (512)
|..+++.-..+.++|..+-|++-+..-+|-++|++.+.++.++.+..+....+++.-..++
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~ 71 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLST 71 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 4445555556789999999999999999999999999999988777777777766544444
No 214
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=89.66 E-value=35 Score=37.21 Aligned_cols=46 Identities=24% Similarity=0.142 Sum_probs=33.6
Q ss_pred ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHH
Q 010361 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAA 225 (512)
Q Consensus 180 Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~ 225 (512)
+...+.+...+..+-.++.+.+.|.+.||++||++++.+.+++.+.
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~ 161 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIF 161 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHH
Confidence 3444444555555566677777799999999999999998877553
No 215
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=89.41 E-value=9.7 Score=42.35 Aligned_cols=155 Identities=17% Similarity=0.109 Sum_probs=97.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCC--hhHHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPR--IPAYICLNTVQ 222 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~R--r~vmi~~dlvq 222 (512)
+++.|..+-.+-.+..+|--+..+=+|-++....-+--.++.+.......-++.=+..|.+.|+... +.+...+.++.
T Consensus 296 ~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 296 KDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIA 375 (509)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHH
Confidence 6678999999999999999999999999988554344444544444555556666667888898873 33333343332
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHH
Q 010361 223 AAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDL 302 (512)
Q Consensus 223 ~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl 302 (512)
.+ +...+.+. .+ ...+....++.|.....+.....+.+ .| +++. ++++++=+.+...+.
T Consensus 376 gl----~~~~~p~~-------~~--~~~l~~~~~~fG~~~g~~~~l~~~i~-~~----~~g~---~~l~~a~Gl~l~~~g 434 (509)
T KOG2504|consen 376 GL----ARLFLPFA-------TT--YVGLIVFSILFGFCVGSFSSLTPVIL-VD----LVGL---EKLSNAYGLLLLFQG 434 (509)
T ss_pred HH----HHHHHHHh-------cc--HHHHHHHHHHHHHHHHHHHHHHHHHH-HH----HcCh---hhcchHHHHHHHHhH
Confidence 21 11111111 11 12233333344444333333222212 23 6665 389999999999999
Q ss_pred HHHHHhHHHHHHHHhhcc
Q 010361 303 LCEIAGASLFGILLSKYE 320 (512)
Q Consensus 303 ~~kilGP~lgGlL~s~~s 320 (512)
+..++||+++|.+....+
T Consensus 435 i~~l~gpPiag~~~d~tg 452 (509)
T KOG2504|consen 435 IGALVGPPIAGLLYDITG 452 (509)
T ss_pred HHHHcCcccceeeeeccC
Confidence 999999999998877655
No 216
>PF12832 MFS_1_like: MFS_1 like family
Probab=89.12 E-value=0.41 Score=39.51 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=39.7
Q ss_pred HHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHH
Q 010361 171 PSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICL 218 (512)
Q Consensus 171 pL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~ 218 (512)
|++.-+ .| +..++++...+..+..++..|..|.++||++|++.+...
T Consensus 24 ~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 24 PLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred hHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 444443 45 999999999999999999999999999999999876554
No 217
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=87.78 E-value=20 Score=39.75 Aligned_cols=85 Identities=20% Similarity=0.197 Sum_probs=52.5
Q ss_pred HHHHHhHhhhhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchh----HHHHHHHHHHHHHHHHHHHHHHHhh
Q 010361 384 EAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSII----GGFSGLCASMGVAATFLSAYLVRRL 459 (512)
Q Consensus 384 ~~i~eG~~~y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~i----G~~~g~gavgGLlGt~lap~L~rRl 459 (512)
..++||+++.+++|.++....+++.|-...--.+.+.-..++++--++..+ |-+....++..++-.++.+++.||+
T Consensus 267 ~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 267 MSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred ccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457899999999999988777766664321113334444444443344443 4444444444444448889999999
Q ss_pred ChhhHHHHH
Q 010361 460 GILKAGAAG 468 (512)
Q Consensus 460 G~~ragl~~ 468 (512)
|-..+.+..
T Consensus 347 GW~~~Alit 355 (491)
T PF03219_consen 347 GWRTAALIT 355 (491)
T ss_pred hHHHHHHHh
Confidence 976665443
No 218
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=87.59 E-value=4.1 Score=45.11 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=51.7
Q ss_pred hhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhh-ChhhHHHHHHHHHHHH
Q 010361 416 PGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-GILKAGAAGLIFQASL 475 (512)
Q Consensus 416 ~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRl-G~~ragl~~l~~Q~~~ 475 (512)
..+.++.|+.+ +|+++...+.+.+...++..++.++.+++.+|+ |..|+..++...+.+.
T Consensus 28 ~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg 89 (493)
T PRK15462 28 MRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIG 89 (493)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHH
Confidence 44578888875 799999999999999999999999999999999 9999988887766543
No 219
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=87.23 E-value=2.4 Score=46.19 Aligned_cols=128 Identities=13% Similarity=-0.010 Sum_probs=82.2
Q ss_pred ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHH--HhhcccCCCchhHHHHHHHHH
Q 010361 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHA--HTVIPTSSSMLLHPWFFVLVL 257 (512)
Q Consensus 180 Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~--~~~~~~~~~~l~~~l~~v~~l 257 (512)
|+...|+......+..++.....|.+.+|++.|+++....++..+. +....... ......-.+. +.+....++
T Consensus 286 s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~---~~~~~~l~~~~~~~~gi~~~--~~~~~~~~l 360 (468)
T TIGR00788 286 GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLS---SLFDLILVKRWNLAFGISDE--VFVLGDSII 360 (468)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH---HhCceeeeeccccccCCCCe--eeeeehhHH
Confidence 7778888888888999999999999999999999988887765442 11110000 0000000010 111222334
Q ss_pred HHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q 010361 258 AGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE 320 (512)
Q Consensus 258 lg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s 320 (512)
-+....+..++....+.+ +++++ +-...-+.+..++.++..+|+.++|.+...+|
T Consensus 361 ~~~~~g~~~~~~~~~~~~-----~~p~~---~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLAR-----LCPSG---CESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHH-----hCCCC---ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 444444444444444433 66653 56778888888999999999999999999887
No 220
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=82.57 E-value=12 Score=41.02 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=44.7
Q ss_pred hhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh-hChhhHHHHHHHHHHHH
Q 010361 416 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASL 475 (512)
Q Consensus 416 ~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rR-lG~~ragl~~l~~Q~~~ 475 (512)
....++.|+. ++|+++...+.+.+...........+.+++.+| +|..++..++.....+.
T Consensus 40 ~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig 101 (500)
T PRK09584 40 LQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIG 101 (500)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3456788886 589999988888777655555555788999999 59999888777655543
No 221
>PRK03612 spermidine synthase; Provisional
Probab=82.46 E-value=88 Score=34.93 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=38.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHccccceee
Q 010361 148 GLYALYACCLAGNLVEQLWNFAWPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKL 205 (512)
Q Consensus 148 ~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~l 205 (512)
.-+.++..-++|-+..-++|..+.=++....++ +++.+...+...++|.-+|.+
T Consensus 15 ~~~~l~~~~f~sg~~~L~yEv~~~r~l~~~~G~----s~~~~~~ii~~fl~glalGs~ 68 (521)
T PRK03612 15 DRALLLAAVFVCAACGLVYELLLGTLASYLLGD----SVTQFSTVIGLMLFAMGVGAL 68 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc----hHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999888888883 333344444454555544444
No 222
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=81.79 E-value=23 Score=39.28 Aligned_cols=155 Identities=13% Similarity=0.082 Sum_probs=82.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHH---HHHHH--HcCChhHHHHHHHHHHHHHHHccccceeeecccC--ChhHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWP---SAIAL--LHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSP--RIPAYIC 217 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlp---L~~~~--l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~--Rr~vmi~ 217 (512)
+..++|.+|+.-..+.+.+-=.....| =|+-. .+.+.-..|+...+..+...+++|.-|.|--|.. ||+++..
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 344577777776666655433332222 23333 2336677788888899999999999999999998 6776665
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHH
Q 010361 218 LNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVL 297 (512)
Q Consensus 218 ~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l 297 (512)
+.+ +. +.+.+ +.++...+ .+. . |+.+ +.-.+..+.. ...++-|.|+-. ....++-.||=+..
T Consensus 109 ~ii-~~----~g~ll-Y~~l~~~~--~~~-~---y~mL-~~R~l~Gvg~--~n~a~lR~Y~a~---~s~~~dR~rA~a~~ 170 (488)
T KOG2325|consen 109 FLI-AI----IGNLL-YLALAYVP--NGV-K---YLML-VARILTGVGV--GNFAVLRAYIAD---ASTVEDRPRAFAAT 170 (488)
T ss_pred HHH-HH----HHHHH-HHHHHhcc--cch-H---HHHH-HHHHHcCcCc--ccHHHHHHHHHh---ccCccchHHHHHHh
Confidence 543 22 22222 21222222 111 1 1111 1111111211 123344555322 22223456666666
Q ss_pred HHHHHHHHHHhHHHHHHHHh
Q 010361 298 NRIDLLCEIAGASLFGILLS 317 (512)
Q Consensus 298 ~~Idl~~kilGP~lgGlL~s 317 (512)
..-..++.++||.++-.+-.
T Consensus 171 ~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 171 SGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred hhHHHHHHHHhHHHHHHHhh
Confidence 66666778888887766544
No 223
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=80.93 E-value=92 Score=34.12 Aligned_cols=137 Identities=15% Similarity=0.096 Sum_probs=84.5
Q ss_pred cccchhhhccCCCCCCCCCcceeecchhhhhhhhhhcccccccccccCcccCcccccCCCCChhhhhhhccCCCCCcchH
Q 010361 71 VAADDEVREDMSTNEMECPVSVVQLNSEMLQINSEMLQMDSLTLLTEGTFVDSLLTTIPVLSEEEQNALAATPAHPEGLY 150 (512)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~f~ 150 (512)
..+|-+++||.+.+++ ..|+-.-+..+. .+.++..+.+|+++.|+ ++.- .++++.++-+-.. --+
T Consensus 13 ~~~~~~~~~~~~e~~~--V~~~~~~~~s~~------~~~~~~~~~~~~~~~~~--~k~~----tv~ea~~aigfgr-fq~ 77 (528)
T KOG0253|consen 13 SPTESKKQEDVSETEL--VYPVELADATIQ------PSKSDDDLFDSNDFSDT--AKSF----TVDEAMNAIGFGR-FQW 77 (528)
T ss_pred CcchhhHHHhhhhhcc--ccchhhcccccC------CCccccCCccccccccc--ccee----eehhhhhhcCccc-chh
Confidence 3466677777766554 345433333332 44445777888888777 2222 2344444333311 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 151 ALYACCLAGNLVEQLWNFAWPSAI---ALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 151 ~L~~g~~lS~~Gdri~~FAlpL~~---~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
.+.+=....-..|.|+..-..++. ...++ +..+.++++....+-+++-+-..|...|+..||+.....-++.
T Consensus 78 yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 78 YLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred hHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 222223334455666666555553 44456 8888899999988888999999999999999999887776554
No 224
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=80.56 E-value=9.2 Score=43.58 Aligned_cols=76 Identities=11% Similarity=-0.129 Sum_probs=60.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHH-HHHccccceeeecccCC--hhHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLI-LIVGGPLVGKLMDHSPR--IPAYICLNT 220 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp-~ll~gp~aG~lvDR~~R--r~vmi~~dl 220 (512)
+++.|..+..+.++...+-..+..-+|.|+...++ +...++.+.....++ .++..+.+|.++||+++ |+++..+-+
T Consensus 328 ~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~ 407 (633)
T TIGR00805 328 CNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAIC 407 (633)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHH
Confidence 67788888888888888888888899999998888 888888887776665 46778889999999983 445554443
No 225
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=79.21 E-value=15 Score=40.43 Aligned_cols=62 Identities=16% Similarity=0.133 Sum_probs=50.0
Q ss_pred hhHHHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh-hChhhHHHHHHHHHHHHHH
Q 010361 416 PGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLA 477 (512)
Q Consensus 416 ~~~l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rR-lG~~ragl~~l~~Q~~~L~ 477 (512)
..+.++.|+++ +|++....+++.+.......+...+.+++.+| +|..|+..++.....+...
T Consensus 33 ~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~ 96 (489)
T PRK10207 33 VQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYF 96 (489)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 34567778874 89999999988888877777778899999999 9999999988876655443
No 226
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=77.45 E-value=2.2 Score=47.76 Aligned_cols=52 Identities=25% Similarity=0.418 Sum_probs=46.7
Q ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHH
Q 010361 418 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (512)
Q Consensus 418 ~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l 469 (512)
.++.+|.+++|+++.++|.+.+.--+-+++++-+.+.+++|+.-.|..+.+-
T Consensus 32 pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgs 83 (618)
T KOG3762|consen 32 PLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGS 83 (618)
T ss_pred hHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHH
Confidence 4788899999999999999999999999999999999999998777765544
No 227
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=76.69 E-value=26 Score=38.15 Aligned_cols=141 Identities=11% Similarity=0.021 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------cC-ChhHHHHHHHHHHHHHHHccccceeeecccCCh--hHHHHHHHHHHHHHH
Q 010361 158 AGNLVEQLWNFAWPSAIALL-------HP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRI--PAYICLNTVQAAAQL 227 (512)
Q Consensus 158 lS~~Gdri~~FAlpL~~~~l-------~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr--~vmi~~dlvq~~~v~ 227 (512)
+=.+-.-++++-++.+.... ++ +..+.|-+-....+-..++....+..+||...- -++.... .
T Consensus 265 i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l-------~ 337 (451)
T KOG2615|consen 265 IFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSL-------L 337 (451)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHH-------H
Confidence 33444555666666554322 24 666666555555666666666666666666422 1111111 1
Q ss_pred HHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHH
Q 010361 228 LSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIA 307 (512)
Q Consensus 228 ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kil 307 (512)
..++.+ ..+.... . ...++....+.+.......+..+..+-+ ..+. .|--.+|+..+.+-..++.+
T Consensus 338 ~~vP~~-llls~~~---~--~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~-----~~~~---~qrG~~~Gi~~Sl~alaRai 403 (451)
T KOG2615|consen 338 LIVPAF-LLLSLAR---T--PVVLYLGSTLKSFSTASVVTCLTSLVHK-----YGPQ---SQRGTLNGIFRSLGALARAI 403 (451)
T ss_pred HHHHHH-HHHhccc---c--chhhhHHHHHHHHHHHHhhHHHHHHHHh-----cCCc---ccchHHHHHHHHHHHHHHHh
Confidence 122221 1111111 1 1224444444444444444444433322 2333 37889999999999999999
Q ss_pred hHHHHHHHHhhc
Q 010361 308 GASLFGILLSKY 319 (512)
Q Consensus 308 GP~lgGlL~s~~ 319 (512)
||.++|.++.|.
T Consensus 404 GPlv~g~i~~Ws 415 (451)
T KOG2615|consen 404 GPLVSGVIFSWS 415 (451)
T ss_pred hhhhhheeEEEe
Confidence 999999999875
No 228
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=75.57 E-value=16 Score=40.40 Aligned_cols=77 Identities=12% Similarity=-0.026 Sum_probs=63.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 145 HPEGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 145 ~~r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
+||.++.+.....++..+..+..-...-|.....+ +-+.......+.....+...++...+++|++||+++..+.++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~ 311 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLL 311 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHH
Confidence 78889999999999999999998888888877777 556656666666666666689999999999999999998654
No 229
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=75.25 E-value=10 Score=41.09 Aligned_cols=93 Identities=12% Similarity=-0.006 Sum_probs=52.6
Q ss_pred cccceeeecccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccce
Q 010361 199 GPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWA 278 (512)
Q Consensus 199 gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWV 278 (512)
.+..|+++||.+||+.|-.+-++-.+ ..+.+..-.+ . ++..+++.....+.+.++|+++ -|.
T Consensus 398 lLIt~~iverlGRKkTMal~l~~f~i--------flfll~~c~~------r--n~~tvllf~arafisg~fqvaY--vYt 459 (528)
T KOG0253|consen 398 LLITGVIVERLGRKKTMALSLILFGI--------FLFLLTTCKT------R--NAYTVLLFTARAFISGAFQVAY--VYT 459 (528)
T ss_pred hhHHHHHHHHhcchhHHHHHHHHHHH--------HHHHHHHhcC------c--chhHHHHHHHHHHHhchheEEE--Eec
Confidence 34678999999999999888754322 1121111110 1 1222223344456667788877 577
Q ss_pred eEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHH
Q 010361 279 VLLAGINRPIALAKANAVLNRIDLLCEIAGASLF 312 (512)
Q Consensus 279 p~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lg 312 (512)
|.+-+.. --+.+-+.-....-+..|+.|.++
T Consensus 460 PEVyPTa---vRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 460 PEVYPTA---VRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred Ccccchh---hhhcchhhhhhHHhhhhhhhhHHH
Confidence 8887641 233333334444445677888777
No 230
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=73.03 E-value=20 Score=39.04 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=39.5
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHH
Q 010361 428 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS 474 (512)
Q Consensus 428 Gls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~ 474 (512)
..++.+.|++.+...+|.++|.++.+++.+|+|..+...++.....+
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v 98 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMII 98 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 35567889999999999999999999999999999987766554444
No 231
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=72.91 E-value=14 Score=40.90 Aligned_cols=52 Identities=21% Similarity=0.183 Sum_probs=45.8
Q ss_pred hHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHH----hhChhhHHHHH
Q 010361 417 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKAGAAG 468 (512)
Q Consensus 417 ~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~r----RlG~~ragl~~ 468 (512)
.+.++.|+.++|+++...|.+..++.+.+++...+.+++.. |+|..|..+.+
T Consensus 24 ~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~ 79 (477)
T TIGR01301 24 LSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAA 79 (477)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHH
Confidence 45677788889999999999999999999999999999998 59999886654
No 232
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=68.80 E-value=42 Score=35.14 Aligned_cols=37 Identities=19% Similarity=0.119 Sum_probs=29.9
Q ss_pred ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHH
Q 010361 180 SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYI 216 (512)
Q Consensus 180 Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi 216 (512)
.--.++.+-.++.-+.++||..+|.++|+.+||+.-+
T Consensus 70 gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracv 106 (454)
T KOG4332|consen 70 GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV 106 (454)
T ss_pred cCCccceeeecccchHHHHHHHHHHHHhhhcccccee
Confidence 4445666666777888999999999999999998643
No 233
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=65.93 E-value=30 Score=37.88 Aligned_cols=83 Identities=19% Similarity=0.194 Sum_probs=60.8
Q ss_pred HHHHhHhhhhcCcchhHH-HHHHHHHHHhhhhhhHHHHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 385 AIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 385 ~i~eG~~~y~~qpvl~as-la~alL~~tvll~~~~l~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
++..-++.+.- .++... +.++..|++= -+|+ +...++. +.|+|.+++|++.++-.+.-=++-++.+.+..|.++.
T Consensus 18 ~~~~~y~~~r~-qif~~~fiGYa~fYl~R-knF~-~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr 94 (448)
T COG2271 18 EIDKTYKRWRI-QIFLSIFIGYAAFYLTR-KNFN-LAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR 94 (448)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HhHh-hccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc
Confidence 33444443333 344444 6678888875 4564 4455555 4679999999999999999999999999999999998
Q ss_pred hHHHHHHH
Q 010361 463 KAGAAGLI 470 (512)
Q Consensus 463 ragl~~l~ 470 (512)
+-...++.
T Consensus 95 ~fm~~gLi 102 (448)
T COG2271 95 YFMAFGLI 102 (448)
T ss_pred eeehHHHH
Confidence 87777665
No 234
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=63.41 E-value=22 Score=38.82 Aligned_cols=165 Identities=16% Similarity=0.067 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHHHHHHHHHHHHHH
Q 010361 156 CLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMII 234 (512)
Q Consensus 156 ~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq~~~v~ls~~li~ 234 (512)
=..++.+-.+-+=.+|+++.+... .-+++++.-+-..+++.+-.+.-|.+.||++..+-...+. .-+.+..++..+.
T Consensus 279 i~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~--gl~~~G~~~~~iP 356 (464)
T KOG3764|consen 279 ITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLG--GLATVGVSSGPIP 356 (464)
T ss_pred hhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHH--HHHHHHHHhchhH
Confidence 355677778888888888887777 4557777666678899999999999999999544222221 1111122333333
Q ss_pred HHHhhcccCCCchhHHHHHHHHHHHHHHHHHhHhhhhhhcccceeEecCCCchh----HHHHHHHHHHHHHHHHHHHhHH
Q 010361 235 HAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPI----ALAKANAVLNRIDLLCEIAGAS 310 (512)
Q Consensus 235 ~~~~~~~~~~~~l~~~l~~v~~llg~i~~l~sva~~iaverdWVp~Lv~~~~~~----~L~~aNs~l~~Idl~~kilGP~ 310 (512)
++... ..+.+-.+.++......+........ -+++. |.+ -.-..-+.-+..-.++-.+||.
T Consensus 357 ~~~~~---------~~L~vp~~~l~~~i~~~dasl~P~l~-----~lvd~-rh~s~~~vYGsVyaIad~a~sla~a~GP~ 421 (464)
T KOG3764|consen 357 FATSI---------AQLWVPNFGLGFGIGLADASLIPTLG-----YLVDP-RHVSGFNVYGSVYAIADAAFSLAYAIGPT 421 (464)
T ss_pred hhhhH---------HHHhhhhHHHHHHHHHHHHHHhhhhH-----Hhcch-hhccccceeeeHHHHHHHHHHHhhhcccc
Confidence 33111 12222223333333344433322221 13321 110 0111222233333446789999
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHH
Q 010361 311 LFGILLSKYEPVTCLKFAAGLIMWSLP 337 (512)
Q Consensus 311 lgGlL~s~~s~~~~i~~~~~~~~~s~~ 337 (512)
+||.+....|=..........|....+
T Consensus 422 ~gg~iv~~iGF~wl~~iig~~n~iyap 448 (464)
T KOG3764|consen 422 FGGSLVEAIGFEWLMTIIGILNLIYAP 448 (464)
T ss_pred ccchheeehhHHHHHHHHHHHHHHHHH
Confidence 999998877643333333344444333
No 235
>PTZ00207 hypothetical protein; Provisional
Probab=47.72 E-value=2e+02 Score=32.76 Aligned_cols=52 Identities=8% Similarity=0.094 Sum_probs=39.4
Q ss_pred HHHHHH-HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHH
Q 010361 420 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ 472 (512)
Q Consensus 420 ~v~yl~-~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q 472 (512)
....++ +.|++..++|.+.+++...|+ +.+.++++..|+|+.+...++...-
T Consensus 49 ~s~~L~~~lgls~~~l~~i~svg~~~g~-~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 49 ISGAMQARYNLTQRDLSTITTVGIAVGY-FLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 333444 589999999999887666654 5557899999999999887776543
No 236
>TIGR02973 nitrate_rd_NapE periplasmic nitrate reductase, NapE protein. NapE, homologous to TorE (TIGR02972), is a membrane protein of unknown function that is part of the periplasmic nitrate reductase system; it may be part of the enzyme complex. The periplasmic nitrate reductase allows for nitrate respiration in anaerobic conditions.
Probab=47.11 E-value=28 Score=25.78 Aligned_cols=32 Identities=28% Similarity=0.378 Sum_probs=25.9
Q ss_pred HHHHHHHcC--ChhHHHHHHHHHHHHHHHccccc
Q 010361 171 PSAIALLHP--SLLPVAVMGFFSKLILIVGGPLV 202 (512)
Q Consensus 171 pL~~~~l~~--Sll~vav~~~~~~Lp~ll~gp~a 202 (512)
-.+++.++| +...+|.||++-...++++||+.
T Consensus 9 lfl~~~l~PiLsV~~V~~YGF~vWm~Q~~~GpPg 42 (42)
T TIGR02973 9 LFLAAVIWPVLSVITVGGYGFAVWMYQILAGPPG 42 (42)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 344556666 78889999999999999999974
No 237
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=46.45 E-value=27 Score=27.46 Aligned_cols=30 Identities=27% Similarity=0.310 Sum_probs=24.1
Q ss_pred HHHHHcC--ChhHHHHHHHHHHHHHHHccccc
Q 010361 173 AIALLHP--SLLPVAVMGFFSKLILIVGGPLV 202 (512)
Q Consensus 173 ~~~~l~~--Sll~vav~~~~~~Lp~ll~gp~a 202 (512)
++..++| +...+|.||++-...++++||+.
T Consensus 24 l~~~l~PiL~v~~Vg~YGF~VWm~Q~~~GpPg 55 (56)
T PF06796_consen 24 LAVVLFPILAVAFVGGYGFIVWMYQIFFGPPG 55 (56)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3445555 67779999999999999999974
No 238
>TIGR02972 TMAO_torE trimethylamine N-oxide reductase system, TorE protein. Members of this small, apparent transmembrane protein are designated TorE and occur in operons for the trimethylamine N-oxide (TMAO) reductase system. Members are closely related to the NapE protein of the related periplasmic nitrate reductase system. It may be that TorE is an integral membrane subunit of a complex with the reductase TorA.
Probab=45.72 E-value=29 Score=26.28 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=25.8
Q ss_pred HHHHHHHcC--ChhHHHHHHHHHHHHHHHccccc
Q 010361 171 PSAIALLHP--SLLPVAVMGFFSKLILIVGGPLV 202 (512)
Q Consensus 171 pL~~~~l~~--Sll~vav~~~~~~Lp~ll~gp~a 202 (512)
-.+++.++| +...+|.||++-...++++||+.
T Consensus 14 lfl~v~l~PiLsV~~Vg~YGF~vWm~Q~~~GpPg 47 (47)
T TIGR02972 14 GFIIVVLFPILSVAGIGGYGFIIWMIQAFGGVPG 47 (47)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 344556666 78889999999999999999874
No 239
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=45.70 E-value=4.4e+02 Score=28.79 Aligned_cols=58 Identities=10% Similarity=0.115 Sum_probs=40.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHHHccccceeeeccc
Q 010361 147 EGLYALYACCLAGNLVEQLWNFAWPSAIALLHP-SLLPVAVMGFFSKLILIVGGPLVGKLMDHS 209 (512)
Q Consensus 147 r~f~~L~~g~~lS~~Gdri~~FAlpL~~~~l~~-Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~ 209 (512)
+.-+.|..+-++-....-++|.++.-++..+.+ +.++.|+. +..-+++.=.|.|+-|+
T Consensus 7 ~~~alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~I-----ia~yl~amGlGs~~sry 65 (508)
T COG4262 7 RWRALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLI-----IAGYLAAMGLGSLLSRY 65 (508)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHH-----HHHHHHHhchhhhhhcc
Confidence 344556677777777888999999999999988 66665543 33445555667777776
No 240
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=45.64 E-value=21 Score=29.86 Aligned_cols=36 Identities=22% Similarity=0.086 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHH
Q 010361 438 SGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQA 473 (512)
Q Consensus 438 ~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~ 473 (512)
....+++++++....+++.+|+|..+....+.....
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~ 39 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFV 39 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHH
Confidence 344567778888888888888888777665554333
No 241
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=43.16 E-value=3.9e+02 Score=29.53 Aligned_cols=65 Identities=8% Similarity=-0.017 Sum_probs=35.8
Q ss_pred hhcCcchhHHHHHHHHHHHhhhhhhHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010361 393 YMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR 457 (512)
Q Consensus 393 y~~qpvl~asla~alL~~tvll~~~~l~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~r 457 (512)
+.+-|-.+.....-+.+-..+..-+++...-+.++|++...+++.--.-...++++.+..+++..
T Consensus 261 vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta 325 (510)
T KOG3574|consen 261 VLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTA 325 (510)
T ss_pred HHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecC
Confidence 34555444433333333211133455555566689999999888775555555555555444433
No 242
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=42.93 E-value=4.8e+02 Score=28.45 Aligned_cols=175 Identities=15% Similarity=0.085 Sum_probs=84.9
Q ss_pred hhhhcccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHH---HHHH
Q 010361 270 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIIL---TWFT 346 (512)
Q Consensus 270 ~iaverdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgGlL~s~~s~~~~i~~~~~~~~~s~~s~~ll---~~~i 346 (512)
.+|.. .|+=..|++ ++-.++-+..|..-+..+.+|-.++-++++.-.... ..+|..|+....+. .+.+
T Consensus 112 EIAYy-sYIYs~Vd~---~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy-----~~LN~ISL~~~~ia~~~A~fL 182 (433)
T KOG3810|consen 112 EIAYY-SYIYSKVDP---EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSY-----TTLNYISLAEVTIAVLLALFL 182 (433)
T ss_pred HHhhh-heeeeecCH---HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccch-----hhhchhhHHHHHHHHHHHhhC
Confidence 34443 355566765 599999999999999999999999999988543211 12233333222211 1122
Q ss_pred HhhccccccccccccccCCCCCCCCCCCC--cchhHHhHHHHHHhHhhhhcCcch-hHHHHHHH---HHHHhhhhhhHHH
Q 010361 347 NKISSGVLDRAKCSQSCCRTSNEGPVPDA--DNIVDVGIEAIKLGWKEYMQQPVL-PASLAYVL---LCLNVVLTPGSLM 420 (512)
Q Consensus 347 ~rv~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~eG~~~y~~qpvl-~asla~al---L~~tvll~~~~l~ 420 (512)
.++.+....++++.+....+ -|+..+.. .+..+..+..+.+.++.-+++|.+ .-++-.++ .|+.| .. -+-
T Consensus 183 P~v~rSl~f~~~~~~~~v~~-~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV-~n--Y~Q 258 (433)
T KOG3810|consen 183 PRVKRSLYFHRLEDKISVGD-LEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQV-TN--YTQ 258 (433)
T ss_pred CCCchhhhhhcccccceecc-chhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHH-HH--HHH
Confidence 22110000001111100100 01111110 111233455566666777777754 34554332 23322 11 122
Q ss_pred HHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010361 421 TAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVR 457 (512)
Q Consensus 421 v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~r 457 (512)
+.+-+- -.-....=|...++.-+.|..+++.++.+.-
T Consensus 259 ~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i 296 (433)
T KOG3810|consen 259 ILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNI 296 (433)
T ss_pred HHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheee
Confidence 222111 1112234477778888888888888888753
No 243
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=42.32 E-value=1.1e+02 Score=34.40 Aligned_cols=52 Identities=12% Similarity=-0.001 Sum_probs=45.0
Q ss_pred HHHHHHHH-HhCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHH
Q 010361 418 SLMTAFLT-QRGLNPSI-IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 469 (512)
Q Consensus 418 ~l~v~yl~-~lGls~~~-iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l 469 (512)
++...|+. +.|+++.+ +|.+.++...+-.+.-+..+++..|+|..+...++.
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~ 99 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQA 99 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 45666776 68999999 999999999999999999999999999998765444
No 244
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=40.12 E-value=12 Score=39.42 Aligned_cols=40 Identities=25% Similarity=0.192 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 183 PVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 183 ~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
..+.......+..++.+...|.+.||++||++++.+.++.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 4566667778888999999999999999999998887654
No 245
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=40.11 E-value=2.6e+02 Score=30.70 Aligned_cols=65 Identities=15% Similarity=0.225 Sum_probs=50.6
Q ss_pred HHHHHHHH-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010361 419 LMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGS 487 (512)
Q Consensus 419 l~v~yl~~-lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~~L~~~v~~f~~gs 487 (512)
.+++.+++ -+++..+.+++.-+.=-|-.++++-++++.||+|..+....|+..- .++...|||-+
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~----avg~~lF~pAa 99 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLY----AVGAALFWPAA 99 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHH----HHHHHHHhhhh
Confidence 55666665 7999999999999888888899999999999999999888877422 23334666553
No 246
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=37.12 E-value=62 Score=35.21 Aligned_cols=52 Identities=10% Similarity=-0.019 Sum_probs=44.9
Q ss_pred hCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHHHH
Q 010361 427 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAM 478 (512)
Q Consensus 427 lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~~L~~ 478 (512)
.+.+.....+..++.-+|-++|+++.+.+..|+|..++..+++..+.+|-..
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~ 164 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGIL 164 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHH
Confidence 3567777888888888999999999999999999999999999988877643
No 247
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=30.26 E-value=1.4e+02 Score=32.62 Aligned_cols=41 Identities=15% Similarity=0.150 Sum_probs=35.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHH
Q 010361 432 SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ 472 (512)
Q Consensus 432 ~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q 472 (512)
...+++.+...+|+.+|+++++++.+++|..++.+.+....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~ 129 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLF 129 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 35599999999999999999999999999998876665543
No 248
>PF03839 Sec62: Translocation protein Sec62; InterPro: IPR004728 Members of the NSCC2 family have been sequenced from various yeast, fungal and animals species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.; GO: 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane
Probab=29.75 E-value=1.4e+02 Score=29.96 Aligned_cols=17 Identities=29% Similarity=0.260 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010361 439 GLCASMGVAATFLSAYL 455 (512)
Q Consensus 439 g~gavgGLlGt~lap~L 455 (512)
+++.+-++++..++|..
T Consensus 115 ~~~~~~~v~a~~lFPlW 131 (224)
T PF03839_consen 115 GALLLVGVIAICLFPLW 131 (224)
T ss_pred HHHHHHHHHHHHhhhcC
Confidence 33333334444444443
No 249
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=29.69 E-value=38 Score=28.78 Aligned_cols=20 Identities=30% Similarity=0.426 Sum_probs=15.7
Q ss_pred hhHH-HHHHHHHHHHHHHHHH
Q 010361 462 LKAG-AAGLIFQASLLAMAVA 481 (512)
Q Consensus 462 ~rag-l~~l~~Q~~~L~~~v~ 481 (512)
+|.| .+|.+||.+|+.++|.
T Consensus 22 lRYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 22 LRYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHHheee
Confidence 4555 5789999999998776
No 250
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=29.68 E-value=8.3e+02 Score=27.29 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=25.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 431 PSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 431 ~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
....-.+..+-+++|+++.+++.++-|.+|-.
T Consensus 296 g~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 296 GSLLTAAIILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 44566667778888899999999998888744
No 251
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=29.22 E-value=3.3e+02 Score=31.48 Aligned_cols=87 Identities=17% Similarity=0.111 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHH-hCCCcc----hhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010361 415 TPGSLMTAFLTQ-RGLNPS----IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS 489 (512)
Q Consensus 415 ~~~~l~v~yl~~-lGls~~----~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~~L~~~v~~f~~gs~s 489 (512)
+.-++++.|+.+ +|+++. .++.+.+.+-+.+++|++++-. ++|..|+.+++.....+-+.+....-.+.+..
T Consensus 5 Gm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~---~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~ 81 (654)
T TIGR00926 5 GMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADG---WLGKFKTILYLSIVYVVGHALLSFGAIPSSGH 81 (654)
T ss_pred ecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHHHHHHHhccCccccc
Q ss_pred CCchHHHHHHHHHHh
Q 010361 490 QQNPLLFFLCLIVSM 504 (512)
Q Consensus 490 ~~~~~~~f~~~i~~s 504 (512)
.......++++...+
T Consensus 82 ~~~~~~~l~gLaLia 96 (654)
T TIGR00926 82 PLHDLLDLLGLALIA 96 (654)
T ss_pred chHHHHHHHHHHHHH
No 252
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=27.34 E-value=2.6e+02 Score=23.70 Aligned_cols=53 Identities=21% Similarity=0.024 Sum_probs=42.3
Q ss_pred HHHHHHHHcCChhHHHHHHHHHHHHHHHccccceeeecccCChhHHHHHHHHH
Q 010361 170 WPSAIALLHPSLLPVAVMGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQ 222 (512)
Q Consensus 170 lpL~~~~l~~Sll~vav~~~~~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlvq 222 (512)
+|++..+..=|.-..+..+.+..+-+++-++.+..+.+|.+++++++.+-+..
T Consensus 15 LP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~ 67 (85)
T PF06779_consen 15 LPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLT 67 (85)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 45544444449999999999999999999999999999988888877776543
No 253
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=27.27 E-value=3.4e+02 Score=29.12 Aligned_cols=43 Identities=16% Similarity=-0.031 Sum_probs=36.4
Q ss_pred HhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHH
Q 010361 426 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 468 (512)
Q Consensus 426 ~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~ 468 (512)
+.|++..+++.+..+|-+.+++-+.+.+.+..|+|..|.-+..
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~ 105 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLF 105 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 4699999999999999888888777788889999988875443
No 254
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=26.83 E-value=1.4e+02 Score=33.53 Aligned_cols=68 Identities=18% Similarity=0.089 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHcC-Ch-----hHHHHHHHH---HHHHHHHccccceeeecccCChhHHHHHHHH
Q 010361 154 ACCLAGNLVEQLWNFAWPSAI---ALLHP-SL-----LPVAVMGFF---SKLILIVGGPLVGKLMDHSPRIPAYICLNTV 221 (512)
Q Consensus 154 ~g~~lS~~Gdri~~FAlpL~~---~~l~~-Sl-----l~vav~~~~---~~Lp~ll~gp~aG~lvDR~~Rr~vmi~~dlv 221 (512)
+-.-+..+-|.-..|.+.|.. ..++. .. .|-++.+.+ ..+-.+.-.++-|.+.||+.||+++...-++
T Consensus 44 ~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liI 123 (538)
T KOG0252|consen 44 IIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELII 123 (538)
T ss_pred HHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHH
Confidence 334456677777778777664 22222 22 444444433 3444577778889999999999998776544
No 255
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=25.57 E-value=1.7e+02 Score=32.83 Aligned_cols=47 Identities=11% Similarity=0.092 Sum_probs=40.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHH
Q 010361 429 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASL 475 (512)
Q Consensus 429 ls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ragl~~l~~Q~~~ 475 (512)
+++..-+.+.++.-+|-+.|=++++++..|+|..+.....++...+|
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~ 127 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIIC 127 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHH
Confidence 78889999999999999999999999999999999876655433333
No 256
>PF13955 Fst_toxin: Toxin Fst, type I toxin-antitoxin system; PDB: 2KV5_A.
Probab=24.69 E-value=76 Score=20.11 Aligned_cols=16 Identities=19% Similarity=0.490 Sum_probs=12.8
Q ss_pred HHHHhHHHHHHHHhhc
Q 010361 304 CEIAGASLFGILLSKY 319 (512)
Q Consensus 304 ~kilGP~lgGlL~s~~ 319 (512)
..++||++.|.++..+
T Consensus 2 ~~iIaPi~VGvvl~l~ 17 (21)
T PF13955_consen 2 TTIIAPIVVGVVLTLF 17 (21)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred ceehhhHHHHHHHHHH
Confidence 4689999999987754
No 257
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=23.22 E-value=1.1e+03 Score=26.50 Aligned_cols=122 Identities=21% Similarity=0.172 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHccccceeeeccc----CChhHHHHHHHHHHHHHHHHHHHHHHHH----hhcccCCCchhHHHHHHH
Q 010361 184 VAVMGFFSKLILIVGGPLVGKLMDHS----PRIPAYICLNTVQAAAQLLSAAMIIHAH----TVIPTSSSMLLHPWFFVL 255 (512)
Q Consensus 184 vav~~~~~~Lp~ll~gp~aG~lvDR~----~Rr~vmi~~dlvq~~~v~ls~~li~~~~----~~~~~~~~~l~~~l~~v~ 255 (512)
.++.=.+.-+..++..|.+|.+-||. .|||=.+.+-.. .+.+++.++.++. .+++.... -...+-+++
T Consensus 69 ~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~---~i~~~l~Lig~aaDig~~lgd~~~~-~~~~rai~~ 144 (498)
T KOG0637|consen 69 SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL---LIAVSLFLIGYAADIGLLLGDNERK-PVKPRAIVL 144 (498)
T ss_pred ccccccccccccceecccccccccccccccccccchHHHhhH---HHHHHHhhhhhHhhhhHHhcCCccc-ccchHHHHH
Confidence 34444556667789999999999986 455544433221 1122333333332 22221111 011233444
Q ss_pred HHHHHHHHHHhHhhhhhh--cccceeEecCCCchhHHHHHHHHHHHHHHHHHHHhHHHHH
Q 010361 256 VLAGAVERLTGVALGVAV--ERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFG 313 (512)
Q Consensus 256 ~llg~i~~l~sva~~iav--erdWVp~Lv~~~~~~~L~~aNs~l~~Idl~~kilGP~lgG 313 (512)
+++|. .+.|++++..- -|.++.-++.+| ++=++||+.-..-+.+.+.+|=.+|+
T Consensus 145 ~~lg~--~LLD~A~n~~qgp~ra~L~Dl~~~d--~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 145 FILGF--WLLDVANNTLQGPCRALLADLARGD--AKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHh--HHHHhhhhhhhhhHHHHHHHhccCh--hhhhccchhHHHHHHhcceeeeeccc
Confidence 44443 34444442210 022222255554 24455999999999999998888776
No 258
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=22.44 E-value=1.3e+02 Score=34.31 Aligned_cols=46 Identities=22% Similarity=0.308 Sum_probs=39.2
Q ss_pred HHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhChhhHH
Q 010361 420 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAG 465 (512)
Q Consensus 420 ~v~yl~~lGls~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~rag 465 (512)
|--++++.|-.+...|+.-..+=+|.+.-=+...++.+++|..++.
T Consensus 394 LfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~ 439 (618)
T KOG3762|consen 394 LFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM 439 (618)
T ss_pred HHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee
Confidence 3344567899999999999999999999999999999999966654
No 259
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=21.40 E-value=1.3e+03 Score=26.59 Aligned_cols=30 Identities=10% Similarity=0.255 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 010361 288 IALAKANAVLNRIDLLCEIAGASLFGILLS 317 (512)
Q Consensus 288 ~~L~~aNs~l~~Idl~~kilGP~lgGlL~s 317 (512)
+++..+.+.+-.+..+..-+|-.+..-+++
T Consensus 437 ~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 437 EDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 489999998888888876666655555443
No 260
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.59 E-value=33 Score=35.51 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=0.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHhhChh
Q 010361 430 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 462 (512)
Q Consensus 430 s~~~iG~~~g~gavgGLlGt~lap~L~rRlG~~ 462 (512)
..-.+|++.-+-.+--.++.|++=++.||+|..
T Consensus 103 Q~LF~Gi~~l~l~~lLaL~vW~Ym~lLr~~GAs 135 (381)
T PF05297_consen 103 QTLFVGIVILFLCCLLALGVWFYMWLLRELGAS 135 (381)
T ss_dssp ---------------------------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 345667766666666667889997888888844
Done!