Your job contains 1 sequence.
>010362
MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL
PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDAHEAYQDSTKERRRAQIAQAIAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVW
DYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR
LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG
SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS
IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK
VHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010362
(512 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2027749 - symbol:SMU1 "AT1G73720" species:3702... 2332 5.6e-242 1
UNIPROTKB|Q5ZME8 - symbol:SMU1 "WD40 repeat-containing pr... 1793 7.4e-185 1
UNIPROTKB|Q2TBS9 - symbol:SMU1 "WD40 repeat-containing pr... 1793 7.4e-185 1
UNIPROTKB|Q2TAY7 - symbol:SMU1 "WD40 repeat-containing pr... 1793 7.4e-185 1
MGI|MGI:1915546 - symbol:Smu1 "smu-1 suppressor of mec-8 ... 1793 7.4e-185 1
RGD|620694 - symbol:Smu1 "smu-1 suppressor of mec-8 and u... 1783 8.5e-184 1
ZFIN|ZDB-GENE-040426-916 - symbol:smu1 "smu-1 suppressor ... 1771 1.6e-182 1
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 1710 4.6e-176 1
WB|WBGene00004895 - symbol:smu-1 species:6239 "Caenorhabd... 1420 2.5e-145 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 1253 1.2e-127 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 374 1.7e-34 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 366 1.2e-33 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 366 1.2e-33 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 366 1.2e-33 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 366 1.2e-33 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 366 1.2e-33 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 366 1.2e-33 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 360 5.2e-33 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 345 2.0e-31 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 339 1.1e-30 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 347 9.7e-29 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 299 4.3e-26 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 284 2.0e-24 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 284 2.0e-24 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 279 7.3e-24 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 275 2.0e-23 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 294 2.7e-23 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 284 4.5e-22 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 253 5.0e-22 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 288 1.1e-21 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 245 1.2e-21 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 272 9.1e-21 1
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 248 1.9e-20 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 260 5.8e-20 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 255 2.2e-19 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 258 2.6e-19 1
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 235 5.0e-19 1
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 235 5.0e-19 1
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 235 5.0e-19 1
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 235 5.0e-19 1
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 235 5.0e-19 1
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 235 5.0e-19 1
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 235 5.0e-19 1
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 235 5.0e-19 1
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 235 5.0e-19 1
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 235 5.0e-19 1
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 235 5.0e-19 1
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 233 8.3e-19 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 233 8.3e-19 1
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 233 8.3e-19 1
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 233 8.3e-19 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 254 9.8e-19 1
UNIPROTKB|F1NFT8 - symbol:WDR61 "WD repeat-containing pro... 232 1.1e-18 1
UNIPROTKB|Q5ZJH5 - symbol:WDR61 "WD repeat-containing pro... 232 1.1e-18 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 232 1.1e-18 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 232 1.1e-18 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 232 1.1e-18 1
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 232 1.1e-18 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 232 1.1e-18 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 252 1.2e-18 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 252 1.2e-18 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 231 1.4e-18 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 249 1.4e-18 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 230 1.8e-18 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 229 2.3e-18 1
RGD|1308228 - symbol:Wdr61 "WD repeat domain 61" species:... 229 2.3e-18 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 245 3.1e-18 1
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 250 3.4e-18 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 247 3.8e-18 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 234 3.9e-18 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 249 4.7e-18 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 249 4.7e-18 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 249 4.7e-18 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 249 4.7e-18 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 249 4.8e-18 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 238 5.2e-18 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 243 5.7e-18 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 244 6.2e-18 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 241 1.2e-17 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 242 1.3e-17 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 239 1.7e-17 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 241 1.7e-17 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 244 1.9e-17 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 238 2.1e-17 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 238 2.1e-17 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 238 2.1e-17 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 238 2.1e-17 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 238 2.1e-17 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 238 2.1e-17 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 238 2.1e-17 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 238 2.1e-17 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 237 2.7e-17 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 235 3.1e-17 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 240 3.6e-17 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 238 3.7e-17 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 235 4.6e-17 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 226 6.2e-17 1
ASPGD|ASPL0000014385 - symbol:cpcB species:162425 "Emeric... 225 6.8e-17 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 233 7.4e-17 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 215 7.6e-17 1
WARNING: Descriptions of 1293 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 2332 (826.0 bits), Expect = 5.6e-242, P = 5.6e-242
Identities = 434/512 (84%), Positives = 470/512 (91%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M LEIEARDVIKI+LQFCKENSL QTFQTLQ+ECQVSLNTVDS+ETF++DINSGRWD++L
Sbjct: 1 MALEIEARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
PQV+QLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQ MGVMKQEQ ERYLR+EHL
Sbjct: 61 PQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQAERYLRMEHL 120
Query: 121 LVRTYFDAHEAYQDSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPG 180
LVR+YFD HEAY DSTKE EV+VVPPSRLMALIGQALKWQQHQGLLPPG
Sbjct: 121 LVRSYFDPHEAYGDSTKERKRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPG 180
Query: 181 TQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVW 240
TQFDLFRGTAAMKQDVED +P L+HTIKFG KSHAECARFSPDGQFL S S DGFIEVW
Sbjct: 181 TQFDLFRGTAAMKQDVEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVW 240
Query: 241 DYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR 300
DY+SGKLKKDLQYQADE+FMMHD+ VLCI+FSRDSEMLASGSQDGKIK+WRIR+G C+RR
Sbjct: 241 DYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRR 300
Query: 301 LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG 360
+ AHS+GVTSL FSRDGSQ+LSTSFD TARIHGLKSGKLLKEFRGH+SYVN AIFT+DG
Sbjct: 301 FD-AHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDG 359
Query: 361 SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 420
SR++TASSDCTVKVWD K+TDCLQTFKPPPPLRG DASVNS+HLFPKN +HIVVCNKTSS
Sbjct: 360 SRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSS 419
Query: 421 IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
IYIMTLQGQVVKSFSSG REGGDFVAACVS KG+WIYC+GED+ LYCF++QSG LEH M
Sbjct: 420 IYIMTLQGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMM 479
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
VHEKDVIG+THHPHRNLLATY EDCTMKLWKP
Sbjct: 480 VHEKDVIGITHHPHRNLLATYSEDCTMKLWKP 511
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 1793 (636.2 bits), Expect = 7.4e-185, P = 7.4e-185
Identities = 336/513 (65%), Positives = 407/513 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + TLQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCLR
Sbjct: 241 WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR 300
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
R ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT D
Sbjct: 301 RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD 360
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
G +++ASSD TVKVW++K+T+C TFK G D +VNSV L PKNP+H VVCN+++
Sbjct: 361 GHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN 420
Query: 420 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 479
++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE +
Sbjct: 421 TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL 480
Query: 480 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 481 TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 1793 (636.2 bits), Expect = 7.4e-185, P = 7.4e-185
Identities = 335/513 (65%), Positives = 407/513 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + TLQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCLR
Sbjct: 241 WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR 300
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
R ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT D
Sbjct: 301 RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD 360
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
G +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++
Sbjct: 361 GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN 420
Query: 420 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 479
++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE +
Sbjct: 421 TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL 480
Query: 480 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 481 TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 1793 (636.2 bits), Expect = 7.4e-185, P = 7.4e-185
Identities = 335/513 (65%), Positives = 407/513 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + TLQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCLR
Sbjct: 241 WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR 300
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
R ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT D
Sbjct: 301 RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD 360
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
G +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++
Sbjct: 361 GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN 420
Query: 420 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 479
++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE +
Sbjct: 421 TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL 480
Query: 480 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 481 TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 1793 (636.2 bits), Expect = 7.4e-185, P = 7.4e-185
Identities = 335/513 (65%), Positives = 407/513 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + TLQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCLR
Sbjct: 241 WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR 300
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
R ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT D
Sbjct: 301 RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD 360
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
G +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++
Sbjct: 361 GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN 420
Query: 420 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 479
++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE +
Sbjct: 421 TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL 480
Query: 480 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 481 TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 1783 (632.7 bits), Expect = 8.5e-184, P = 8.5e-184
Identities = 333/513 (64%), Positives = 405/513 (78%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL + T E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATFTEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT LS IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCLR
Sbjct: 241 WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR 300
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
R ERAHS+GVT L FS+D SQILS SFD T RIHGLKSGK LKEFRGHSS+VN+A FT D
Sbjct: 301 RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD 360
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
G +++ASSD TVK+W++K+T+C TFK G D +VNSV L PKNP+H VVCN+++
Sbjct: 361 GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN 420
Query: 420 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 479
++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE +
Sbjct: 421 TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL 480
Query: 480 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
VHEKDVIG+ HHPH+NL+ATY ED +KLWKP
Sbjct: 481 TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 1771 (628.5 bits), Expect = 1.6e-182, P = 1.6e-182
Identities = 330/513 (64%), Positives = 404/513 (78%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI++++Q+ KENSL +T LQ E VSLNTVDSIE+FVADINSG WD +L
Sbjct: 1 MSIEIESADVIRLIMQYLKENSLHRTLAMLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
+ LKLP L DLYEQ+VLE+IELREL AR++LRQT M ++KQ QPERY+ LE+L
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R+YFD EAY D S+KE EVSVVPPSRLMAL+GQ+LKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
G DLFRG AA+K E+ +PT L+ IKFG KSH ECARFSPDGQ+LV+ S DGFIEV
Sbjct: 181 GMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV 240
Query: 240 WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
W++ +GK++KDL+YQA + FMM D+ VLC+ FSRD+EMLA+G+QDGKIKVW+I+SGQCLR
Sbjct: 241 WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLR 300
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
R ERAHS+GVT L FS+D +QILS SFD T RIHGLKSGK LKEFRGHSS+VN+A T D
Sbjct: 301 RYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPD 360
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
G ++ASSD TVKVW++K+T+C TFK G D +VN+V L PKNP+H VVCN+++
Sbjct: 361 GHHAISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN 420
Query: 420 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 479
++ IM +QGQ+V+SFSSGKREGGDFV +SP+GEWIYCVGED LYCFS +GKLE +
Sbjct: 421 TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVTGKLERTL 480
Query: 480 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
VHEKDVIG+ HHPH+NL+ TY ED +KLWKP
Sbjct: 481 TVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP 513
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 1710 (607.0 bits), Expect = 4.6e-176, P = 4.6e-176
Identities = 315/513 (61%), Positives = 407/513 (79%)
Query: 1 MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL 60
M++EIE+ DVI+++ Q+ KE++L +T QTLQ E VSLNTVDS++ FV DI++G WD +L
Sbjct: 1 MSIEIESADVIRLIQQYLKESNLMKTLQTLQEETGVSLNTVDSVDGFVQDISNGHWDTVL 60
Query: 61 PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120
LKLP KL +LYEQIVLE+IELREL AR++LRQT M ++KQ++PERY+ LE++
Sbjct: 61 KVTQSLKLPDKKLLNLYEQIVLELIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENM 120
Query: 121 LVRTYFDAHEAYQD-STKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPP 179
L R YFD EAY + S+KE EV VVP SRL+AL+GQALKWQQHQGLLPP
Sbjct: 121 LQRAYFDPREAYAEGSSKEKRRTVIAQELSGEVHVVPSSRLLALLGQALKWQQHQGLLPP 180
Query: 180 GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEV 239
GT DLFRG AAMK E+MYPT L IKFG KSH ECA+FSPDGQ+L++ S DGF+EV
Sbjct: 181 GTTIDLFRGKAAMKDQEEEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEV 240
Query: 240 WDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
W++ +GK++KDL+YQA + FMM ++ VL + FSRDSEM+ASG+QDG+IKVWRI +GQCLR
Sbjct: 241 WNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLR 300
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
+ E+AH++G+T L FSRD SQ+LS SFD T R+HGLKSGK+LKEF+GHSS+VN+A FT D
Sbjct: 301 KFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPD 360
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
G V++ASSD TVKVW LK+T+C+ T+KP G + +VN+V + PKNP+H +VCN+++
Sbjct: 361 GHSVLSASSDGTVKVWSLKTTECVATYKP----LGNELAVNTVLILPKNPEHFIVCNRSN 416
Query: 420 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM 479
++ IM +QGQ+V+SFSSGKREGG F++A +SP+GE+IYC GED+ LYCFS SGKLE +
Sbjct: 417 TVVIMNMQGQIVRSFSSGKREGGAFISATLSPRGEFIYCAGEDQVLYCFSVSSGKLERTL 476
Query: 480 KVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
VHEKDVIG+THHPH+NLLA+Y ED +KLWKP
Sbjct: 477 NVHEKDVIGLTHHPHQNLLASYSEDGLLKLWKP 509
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 1420 (504.9 bits), Expect = 2.5e-145, P = 2.5e-145
Identities = 265/510 (51%), Positives = 362/510 (70%)
Query: 2 TLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILP 61
++EIE+ DVI+++ QF KE++L +T LQ E VSLNTVDSI+ F +I SG WD +L
Sbjct: 3 SIEIESSDVIRLIEQFLKESNLHRTLAILQEETNVSLNTVDSIDGFCNEITSGNWDNVLK 62
Query: 62 QVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLL 121
V LKLP KL DLYE +++E++ELREL TAR + RQT M ++KQ P+R+ RLE L+
Sbjct: 63 TVQSLKLPAKKLIDLYEHVIIELVELRELATARLVARQTDPMILLKQIDPDRFARLESLI 122
Query: 122 VRTYFDAHEAYQDSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGT 181
R YFD E Y D +KE EV VV PSRL++L+GQ+LKWQ HQGLLPPGT
Sbjct: 123 NRPYFDGQEVYGDVSKEKRRSVIAQTLSSEVHVVAPSRLLSLLGQSLKWQLHQGLLPPGT 182
Query: 182 QFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWD 241
DLFRG AA K+ +E+ YPT ++ +IKF TKS+ E A FSPD +LVS S DGFIEVW+
Sbjct: 183 AIDLFRGKAAQKEQIEERYPTMMARSIKFSTKSYPESAVFSPDANYLVSGSKDGFIEVWN 242
Query: 242 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 301
Y++GKL+KDL+YQA + MM D V CI FSRDSEMLA+GS DGKIKVW++ +G CLRR
Sbjct: 243 YMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRF 302
Query: 302 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 361
+RAH++GV ++ FS+D S ILS D R+HG+KSGK LKE RGHSSY+ D ++++G+
Sbjct: 303 DRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGN 362
Query: 362 RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN-PDHIVVCNKTSS 420
+++ S+D +++VW KS +CL TF+ + D + +V PK+ P ++VCN++++
Sbjct: 363 HIISCSTDGSIRVWHGKSGECLSTFR----VGSEDYPILNVIPIPKSDPPQMIVCNRSNT 418
Query: 421 IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+Y++ + GQVV++ +SGKRE GDF+ +SPKGEW Y + ED +YCF SG LE +
Sbjct: 419 LYVVNISGQVVRTMTSGKREKGDFINCILSPKGEWAYAIAEDGVMYCFMVLSGTLETTLP 478
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
V E+ IG+ HHPH+NL+A+Y ED +KLW
Sbjct: 479 VTERLPIGLAHHPHQNLIASYAEDGLLKLW 508
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
Identities = 243/514 (47%), Positives = 345/514 (67%)
Query: 3 LEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQ 62
+EI+++DVIK++LQF KENSL + LQ E ++LN VDS ETF+ D+ +G WD++L
Sbjct: 12 IEIQSQDVIKLILQFLKENSLGNSLTALQEETGINLNAVDSKETFLNDVKNGNWDSVLTV 71
Query: 63 VAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLV 122
V+ L+L L DLYEQIV E++ L+E + + ++R+T+ + MK Q ERYL+LE+ L
Sbjct: 72 VSTLRLSTTLLMDLYEQIV-ELLHLKEYELCKYLIRKTEPLNYMKLNQQERYLKLENHLQ 130
Query: 123 RTYFDAHEAYQDS-TKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGT 181
R Y D + Y+ T E E+ VP SRL++L+ Q+L WQ+HQG++P
Sbjct: 131 REYIDLGDFYKYGITTEKRRKQLIEQLNNEIITVPSSRLLSLLSQSLHWQKHQGIIPDDC 190
Query: 182 -QFDLFRGTAAMK--QDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIE 238
+FDLF+G K + E+ T L TIKF K+ E +FSPD ++L++ S DGFIE
Sbjct: 191 MEFDLFKGEVPFKKIESEEEQITTVLDKTIKFNNKNKPETIKFSPDSKYLLTGSMDGFIE 250
Query: 239 VWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 298
VWDY +GKL K L YQ+++ FMMHD+ +LCI FS+D E LA+GS D KIKVW+I+SG+CL
Sbjct: 251 VWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCL 310
Query: 299 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 358
R+ E AH+ GVT L FSR+ +QILS SFDS+ +IHGLKSGK LK FRGH S+VND F +
Sbjct: 311 RKFEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNH 370
Query: 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 418
D RV++ SSD +K+WD KS+DCLQT P + D S+ S+ + KNP+ ++VCN +
Sbjct: 371 DEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDISIRSITILLKNPEFLLVCN-S 429
Query: 419 SSIYIMTLQGQVV-KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
S I I++++ Q + K+F+S + F+ +SP ++Y V ED LY F SG L +
Sbjct: 430 SQISIVSMKSQTISKTFTSENSK--TFLVCTLSPLQNYLYAVDEDNILYTFDFNSGSLLN 487
Query: 478 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
K+H+++VI ++HHP +NLLAT G DC +K+WK
Sbjct: 488 KFKIHDQEVISISHHPTKNLLATTGSDCLLKIWK 521
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 99/339 (29%), Positives = 165/339 (48%)
Query: 179 PGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDG 235
P T+ + T + + P ++T+KF H + +FSP+G++L S S D
Sbjct: 8 PETEASKTQSTPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 67
Query: 236 FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG 295
I++W GK +K T H + + +S DS +L S S D +K+W + SG
Sbjct: 68 LIKIWGAYDGKFEK--------TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 119
Query: 296 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAI 355
+CL+ L + HS V F+ + I+S SFD + RI +K+GK LK HS V+
Sbjct: 120 KCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 178
Query: 356 FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVC 415
F DGS +V++S D ++WD S CL+T + + V+ V P N +I+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAA 232
Query: 416 NKTSSIYIMTL-QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK 474
+++ + +G+ +K+++ K E A G+WI ED +Y ++ Q+ +
Sbjct: 233 TLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWK 511
+ ++ H VI HP N++A+ D T+KLWK
Sbjct: 293 VVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 95/317 (29%), Positives = 157/317 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
P ++ +KF H + +FSP+G++L S S D I++W GK +K
Sbjct: 4 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-------- 55
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 56 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQ 114
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 115 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 174
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 175 ASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTG 228
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N
Sbjct: 229 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 288
Query: 497 LLATYG--EDCTMKLWK 511
++A+ D T+KLWK
Sbjct: 289 IIASAALENDKTIKLWK 305
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 95/317 (29%), Positives = 157/317 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
P ++ +KF H + +FSP+G++L S S D I++W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-------- 81
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQ 140
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 201 ASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 497 LLATYG--EDCTMKLWK 511
++A+ D T+KLWK
Sbjct: 315 IIASAALENDKTIKLWK 331
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 95/317 (29%), Positives = 157/317 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
P ++ +KF H + +FSP+G++L S S D I++W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-------- 81
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQ 140
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 201 ASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 497 LLATYG--EDCTMKLWK 511
++A+ D T+KLWK
Sbjct: 315 IIASAALENDKTIKLWK 331
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 95/317 (29%), Positives = 157/317 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
P ++ +KF H + +FSP+G++L S S D I++W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-------- 81
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQ 140
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 201 ASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 497 LLATYG--EDCTMKLWK 511
++A+ D T+KLWK
Sbjct: 315 IIASAALENDKTIKLWK 331
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 95/317 (29%), Positives = 157/317 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
P ++ +KF H + +FSP+G++L S S D I++W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-------- 81
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQ 140
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 201 ASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 497 LLATYG--EDCTMKLWK 511
++A+ D T+KLWK
Sbjct: 315 IIASAALENDKTIKLWK 331
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 95/317 (29%), Positives = 157/317 (49%)
Query: 201 PTTLSHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
P ++ +KF H + +FSP+G++L S S D I++W GK +K
Sbjct: 30 PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-------- 81
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + + +S DS +L S S D +K+W + SG+CL+ L + HS V F+
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQ 140
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ I+S SFD + RI +K+GK LK HS V+ F DGS +V++S D ++WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSS 436
S CL+T + + V+ V P N +I+ +++ + +G+ +K+++
Sbjct: 201 ASGQCLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTG 254
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
K E A G+WI ED +Y ++ Q+ ++ ++ H VI HP N
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 497 LLATYG--EDCTMKLWK 511
++A+ D T+KLWK
Sbjct: 315 IIASAALENDKTIKLWK 331
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 94/313 (30%), Positives = 157/313 (50%)
Query: 205 SHTIKFGTKSHAECA---RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261
++T+KF H + +FSP+G++L S S D I++W GK +K T
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--------TISG 112
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H + + +S DS +L SGS D +KVW + +G+ L+ L + HS V F+ + I
Sbjct: 113 HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTL-KGHSNYVFCCNFNPQSNLI 171
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
+S SFD + RI +++GK LK HS V+ F DGS +V++S D ++WD S
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 231
Query: 382 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKRE 440
CL+T + + V+ V P N +I+ +++ + +G+ +K+++ K E
Sbjct: 232 CLKTL-----IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 285
Query: 441 GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLAT 500
A G+WI ED +Y ++ QS ++ ++ H V+ HP N++A+
Sbjct: 286 KYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIAS 345
Query: 501 YG--EDCTMKLWK 511
D T+KLWK
Sbjct: 346 AALENDKTIKLWK 358
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 92/325 (28%), Positives = 157/325 (48%)
Query: 194 QDVEDMYPTTLSHTIKFGTKSHAEC---ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKD 250
Q E + P T ++ +K+ K H + +FSPDG++L S S D I++W GK ++
Sbjct: 25 QQTESI-PQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT 83
Query: 251 LQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVT 310
L+ H E + I +S+DS+++ S S D IK+W + SG+ ++ L + H E V
Sbjct: 84 LEG--------HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTL-KGHKEYVF 134
Query: 311 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 370
+ F+ + I+S SFD RI + +G+ K HS V F DG+ VV+ S D
Sbjct: 135 GVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDG 194
Query: 371 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV--CNKTSSIYIMTLQG 428
TV++WD + L T D S F N ++ + T ++
Sbjct: 195 TVRIWDTTTGQLLNTISTE------DGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNK 248
Query: 429 QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG 488
+ +K+++ K E + G+WI ED +Y ++ Q+ ++ + HE V+
Sbjct: 249 KCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLT 308
Query: 489 VTHHPHRNLLATYG--EDCTMKLWK 511
V HP N++A+ +D ++K+WK
Sbjct: 309 VACHPTENIIASGALEKDRSVKIWK 333
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 339 (124.4 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 91/324 (28%), Positives = 157/324 (48%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKK 249
+A +++ E P G + +FSP+G++L S + D I +W G KK
Sbjct: 16 SAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKK 75
Query: 250 DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGV 309
L Y H + + +S DS L S S D +KVW +RSG+CL+ L + HS+ V
Sbjct: 76 TL-YG-------HSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTL-KGHSDFV 126
Query: 310 TSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369
F+ + I+S SFD + +I +K+GK LK HS ++ F +GS +V+ S D
Sbjct: 127 FCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYD 186
Query: 370 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QG 428
++WD S CL+T G+ V+ V P N +I+ +++ + +G
Sbjct: 187 GLCRIWDAASGQCLRTLADE-----GNPPVSFVKFSP-NGKYILTATLDNTLKLWDYSRG 240
Query: 429 QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG 488
+ +K+++ K E A+ +W+ ED +Y ++ Q+ ++ ++ H VI
Sbjct: 241 RCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVIS 300
Query: 489 VTHHPHRNLLATYG--EDCTMKLW 510
HP +N++A+ D T+K+W
Sbjct: 301 AACHPTKNIIASAALENDKTIKVW 324
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 347 (127.2 bits), Expect = 9.7e-29, P = 9.7e-29
Identities = 91/293 (31%), Positives = 148/293 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
F+PDG+ L S S D I++WD +G+L++ L H ++V + FS D ++LAS
Sbjct: 842 FAPDGKELASASDDSTIKIWDLATGELQQTLD--------SHSQSVRSVAFSPDGKLLAS 893
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S D IKVW +G+ + LE S V S+ FS DG ++ S S +T ++ +G+L
Sbjct: 894 SSLDSTIKVWNPATGELQQSLE-GRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGEL 952
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
L+ GHS V F+ DG ++ ++SSD T+K+W+ + + QTFK G D +
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK------GHDLWIR 1006
Query: 401 SVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459
+V P H+V + ++I + L ++ +S R A SP + +
Sbjct: 1007 AVAFSPDGK-HLVSGSDDNTIKLWDLATSELQQSLEDHSRS---VHAVAFSPDDKQLASS 1062
Query: 460 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
D + + +G+L+ ++ H + V VT P LLA+ D T+KLW P
Sbjct: 1063 SLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNP 1115
Score = 342 (125.4 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 91/302 (30%), Positives = 148/302 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G E FSPDG+ L S S+D I++WD +G+L LQ TF H ++ +
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGEL---LQ-----TFEGHPHSIWSVA 841
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F+ D + LAS S D IK+W + +G+ + L+ +HS+ V S+ FS DG + S+S DST
Sbjct: 842 FAPDGKELASASDDSTIKIWDLATGELQQTLD-SHSQSVRSVAFSPDGKLLASSSLDSTI 900
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ +G+L + G S +V F+ DG ++ + S TVK+W+ + + LQT
Sbjct: 901 KVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQT----- 955
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFV--AAC 448
L G SV SV P + T+ + G++ ++F +G D A
Sbjct: 956 -LEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTF-----KGHDLWIRAVA 1009
Query: 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 508
SP G+ + +D + + + +L+ ++ H + V V P LA+ D T+K
Sbjct: 1010 FSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIK 1069
Query: 509 LW 510
LW
Sbjct: 1070 LW 1071
Score = 332 (121.9 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 92/303 (30%), Positives = 158/303 (52%)
Query: 214 SHAECAR---FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
SH++ R FSPDG+ L S S D I+VW+ +G+L++ L+ ++ V +
Sbjct: 874 SHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSG--------WVKSVA 925
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS D + LASGS+ +K+W +G+ L+ LE HS+ V S+ FS DG Q+ S+S D+T
Sbjct: 926 FSPDGKKLASGSEKNTVKLWNPATGELLQTLE-GHSQSVRSVAFSPDGKQLASSSSDTTI 984
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ +G+L + F+GH ++ F+ DG +V+ S D T+K+WDL +++ Q+ +
Sbjct: 985 KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLE--- 1041
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKT--SSIYIM-TLQGQVVKSFSSGKREGGDFVAA 447
D S SVH +PD + + + S+I + + G++ ++ G +G V
Sbjct: 1042 -----DHS-RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLE-GHSQGVRSVT- 1093
Query: 448 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 507
SP G+ + D + ++ +G+L+ + V V P LA+ D T+
Sbjct: 1094 -FSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTI 1152
Query: 508 KLW 510
KLW
Sbjct: 1153 KLW 1155
Score = 312 (114.9 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 89/294 (30%), Positives = 141/294 (47%)
Query: 217 ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 276
E FSPDG+ LVS S+D +++WD +G+L LQ T H TV + FS D +
Sbjct: 754 ESVVFSPDGKQLVSGSYDDTVKIWDPATGEL---LQ-----TLDGHSGTVESLAFSPDGK 805
Query: 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336
+LASGS D I +W +G+ L+ E H + S+ F+ DG ++ S S DST +I L
Sbjct: 806 LLASGSYDNTIDLWDSATGELLQTFE-GHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
Query: 337 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 396
+G+L + HS V F+ DG + ++S D T+KVW+ + + Q+ L G
Sbjct: 865 TGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQS------LEGRS 918
Query: 397 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWI 456
V SV P K + G+++++ G + VA SP G+ +
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLE-GHSQSVRSVA--FSPDGKQL 975
Query: 457 YCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
D + ++ +G+L+ K H+ + V P L + +D T+KLW
Sbjct: 976 ASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLW 1029
Score = 303 (111.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 71/194 (36%), Positives = 109/194 (56%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263
L T++ G FSPDG+ L S S+DG I++W+ L+G+L++ L ++D
Sbjct: 1078 LQRTLE-GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSD------- 1129
Query: 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 323
V + FS D + LASG D IK+W +G+ L+ LE HS+ + S+VFS DG + S
Sbjct: 1130 -WVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLE-GHSDRIQSVVFSPDGKLLAS 1187
Query: 324 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 383
S+D TA++ +G+LL+ F GHS +V F+ DG + ++S T+K+WD + + L
Sbjct: 1188 GSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELL 1247
Query: 384 QTFKPPPPLRGGDA 397
QT P G A
Sbjct: 1248 QTLNDPDESAGSVA 1261
Score = 287 (106.1 bits), Expect = 9.2e-22, P = 9.2e-22
Identities = 87/294 (29%), Positives = 141/294 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE-TFMMHDETVLCIEFSRDSEMLA 279
FSP+G + F+ + W L K + + A++ T H V + FS D + L
Sbjct: 711 FSPEGS-ITRRIFNYNLSGWSQLP---KVEQTWSAEQQTLENHLGPVESVVFSPDGKQLV 766
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
SGS D +K+W +G+ L+ L+ HS V SL FS DG + S S+D+T + +G+
Sbjct: 767 SGSYDDTVKIWDPATGELLQTLD-GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGE 825
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
LL+ F GH + F DG + +AS D T+K+WDL + + QT L SV
Sbjct: 826 LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQT------LDSHSQSV 879
Query: 400 NSVHLFPKNPDHIVVCNKT--SSIYIMT-LQGQVVKSFSSGKREGGDFVAACVSPKGEWI 456
SV +PD ++ + + S+I + G++ +S G+ G + SP G+ +
Sbjct: 880 RSVAF---SPDGKLLASSSLDSTIKVWNPATGELQQSLE-GR--SGWVKSVAFSPDGKKL 933
Query: 457 YCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E + ++ +G+L ++ H + V V P LA+ D T+KLW
Sbjct: 934 ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Score = 262 (97.3 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 82/272 (30%), Positives = 131/272 (48%)
Query: 246 KLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAH 305
KL + +TF HD + + FS D + L SGS D IK+W + + + + LE H
Sbjct: 985 KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLED-H 1043
Query: 306 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365
S V ++ FS D Q+ S+S DST ++ +G+L + GHS V F+ DG + +
Sbjct: 1044 SRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLAS 1103
Query: 366 ASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM- 424
S D T+K+W+ + + QT L G V+SV P + S+I +
Sbjct: 1104 NSYDGTIKLWNPLTGELQQT------LTGRSDWVDSVAFSPDGKQ-LASGYYDSTIKLWD 1156
Query: 425 TLQGQVVKSFSSGKREG-GDFVAACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 482
+ G+++++ EG D + + V SP G+ + D+ + +G+L + + H
Sbjct: 1157 SATGELLQTL-----EGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGH 1211
Query: 483 EKDVIGVTHHPHRNLLAT--YGEDCTMKLWKP 512
K V V P LLA+ YGE T+KLW P
Sbjct: 1212 SKWVESVAFSPDGKLLASSSYGE--TIKLWDP 1241
Score = 227 (85.0 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 61/185 (32%), Positives = 94/185 (50%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263
L T+ G + FSPDG+ L S +D I++WD +G+L LQ T H
Sbjct: 1120 LQQTLT-GRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGEL---LQ-----TLEGHS 1170
Query: 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 323
+ + + FS D ++LASGS D K+W +G+ L+ E HS+ V S+ FS DG + S
Sbjct: 1171 DRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFE-GHSKWVESVAFSPDGKLLAS 1229
Query: 324 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC-TVKVWDLKSTDC 382
+S+ T ++ +G+LL+ F+ DG+R+ AS D K+WD + +
Sbjct: 1230 SSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRL--ASVDIFDTKIWDPATGEL 1287
Query: 383 LQTFK 387
LQ K
Sbjct: 1288 LQALK 1292
Score = 205 (77.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 61/209 (29%), Positives = 100/209 (47%)
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364
H V S+VFS DG Q++S S+D T +I +G+LL+ GHS V F+ DG +
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLA 808
Query: 365 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 424
+ S D T+ +WD + + LQTF+ P S+ SV P + + + S+I I
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPH------SIWSVAFAPDGKE-LASASDDSTIKIW 861
Query: 425 TLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHE 483
L G++ ++ S + + SP G+ + D + ++ +G+L+ ++
Sbjct: 862 DLATGELQQTLDSHSQS---VRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 484 KDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
V V P LA+ E T+KLW P
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNP 947
Score = 176 (67.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 59/189 (31%), Positives = 89/189 (47%)
Query: 163 LIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFS 222
L G++ W P G Q L G + D L T++ G + FS
Sbjct: 1124 LTGRS-DWVDSVAFSPDGKQ--LASGYYDSTIKLWDSATGELLQTLE-GHSDRIQSVVFS 1179
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282
PDG+ L S S+D ++WD +G+L LQ F H + V + FS D ++LAS S
Sbjct: 1180 PDGKLLASGSYDQTAKLWDPATGEL---LQI-----FEGHSKWVESVAFSPDGKLLASSS 1231
Query: 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLK 342
IK+W +G+ L+ L E S+ FS DG+++ S T +I +G+LL+
Sbjct: 1232 YGETIKLWDPVTGELLQTLNDP-DESAGSVAFSPDGNRLASVDIFDT-KIWDPATGELLQ 1289
Query: 343 EFRGHSSYV 351
+GHS +V
Sbjct: 1290 ALKGHSKWV 1298
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 299 (110.3 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 91/328 (27%), Positives = 153/328 (46%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G A +V P T++ G + C +FS DG L S S D + +W + L
Sbjct: 19 GNAGTSGNVPIYKPYRHLKTLE-GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSL 77
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG-QCLRRLERAHS 306
+Y+ H + + +S DS S S D +++W RS +CL+ L R H+
Sbjct: 78 IH--RYEG------HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL-RGHT 128
Query: 307 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 366
V + F+ + I+S SFD T RI +K+GK ++ + HS ++ F DGS +V+A
Sbjct: 129 NFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSA 188
Query: 367 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426
S D + K+WD K CL+T L + S F N I+V S++ +
Sbjct: 189 SHDGSCKIWDAKEGTCLKT------LIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNY 242
Query: 427 Q-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKD 485
G+ +K ++ + +A G++I ED +Y + Q+ + ++ H
Sbjct: 243 ATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDA 302
Query: 486 VIGVTHHPHRNLLATYGE--DCTMKLWK 511
VI V+ HP +N +++ G D T+++WK
Sbjct: 303 VISVSCHPVQNEISSSGNHLDKTIRIWK 330
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 284 (105.0 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 66/224 (29%), Positives = 115/224 (51%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
++ + ++ T+K G ++ C F+P +VS SFD + +WD +G K
Sbjct: 157 EIVTSRMTKTLK-GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK-------- 207
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + V + F+RD ++ASGS DG +++W +GQC++ L + V + FS +
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGH--SSYVNDAIFTNDGSR-VVTASSDCTVKV 374
G IL+++ DST ++ GK LK++ GH S Y A F+ G + +++ S DC + +
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYI 327
Query: 375 WDLKSTDCLQTFKP-PPPLRGGDAS-----VNSVHLFPKNPDHI 412
W+L++ + +Q + P+ D + S L P N HI
Sbjct: 328 WNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHI 371
Score = 266 (98.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 81/310 (26%), Positives = 148/310 (47%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETV 266
T++ TKS + A+FSP G++L + S D +++W+ D + T H V
Sbjct: 82 TLEGHTKSISS-AKFSPCGKYLGTSSADKTVKIWNM-------DHMI-CERTLTGHKLGV 132
Query: 267 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
I +S DS + S S D +K++ I + + + L + H+ V F+ S ++S SF
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL-KGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 327 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
D + RI +K+G +K HS V+ F DGS + + S D V++WD + C++T
Sbjct: 192 DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 387 KPP--PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGD 443
PP+ A V F N +I+ N S++ + +G+ +K ++ +
Sbjct: 252 VDDENPPV----AFVK----FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 444 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG- 502
A G+WI ED +Y ++ Q+ ++ ++ H + V+ HP +N++A+
Sbjct: 304 IFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGAL 363
Query: 503 -EDCTMKLWK 511
D + +W+
Sbjct: 364 EPDNKIHIWR 373
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 284 (105.0 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 66/224 (29%), Positives = 115/224 (51%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
++ + ++ T+K G ++ C F+P +VS SFD + +WD +G K
Sbjct: 157 EIVTSRMTKTLK-GHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK-------- 207
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + V + F+RD ++ASGS DG +++W +GQC++ L + V + FS +
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGH--SSYVNDAIFTNDGSR-VVTASSDCTVKV 374
G IL+++ DST ++ GK LK++ GH S Y A F+ G + +++ S DC + +
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYI 327
Query: 375 WDLKSTDCLQTFKP-PPPLRGGDAS-----VNSVHLFPKNPDHI 412
W+L++ + +Q + P+ D + S L P N HI
Sbjct: 328 WNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHI 371
Score = 266 (98.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 81/310 (26%), Positives = 148/310 (47%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETV 266
T++ TKS + A+FSP G++L + S D +++W+ D + T H V
Sbjct: 82 TLEGHTKSISS-AKFSPCGKYLGTSSADKTVKIWNM-------DHMI-CERTLTGHKLGV 132
Query: 267 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
I +S DS + S S D +K++ I + + + L + H+ V F+ S ++S SF
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL-KGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 327 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
D + RI +K+G +K HS V+ F DGS + + S D V++WD + C++T
Sbjct: 192 DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 387 KPP--PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGD 443
PP+ A V F N +I+ N S++ + +G+ +K ++ +
Sbjct: 252 VDDENPPV----AFVK----FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 444 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG- 502
A G+WI ED +Y ++ Q+ ++ ++ H + V+ HP +N++A+
Sbjct: 304 IFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGAL 363
Query: 503 -EDCTMKLWK 511
D + +W+
Sbjct: 364 EPDNKIHIWR 373
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 279 (103.3 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 59/191 (30%), Positives = 105/191 (54%)
Query: 201 PTT-LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETF 259
PT ++ T+K G ++ C F+P +VS SFD + +WD +G K T
Sbjct: 151 PTVKMAKTLK-GHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVK--------TL 201
Query: 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS 319
H + V + F+RD ++ SGS DG +++W +GQC++ L + V + FS +G
Sbjct: 202 PAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGK 261
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSS--YVNDAIFTNDGSR-VVTASSDCTVKVWD 376
ILS++ D+T ++ GK LK+++GH + Y A F+ G + +++ S DC + VW+
Sbjct: 262 YILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWN 321
Query: 377 LKSTDCLQTFK 387
L++ + +Q+ +
Sbjct: 322 LQTKEVVQSLE 332
Score = 268 (99.4 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 80/312 (25%), Positives = 147/312 (47%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263
L TI+ TKS +FSP G+FL + S D +++W+ DL + T H
Sbjct: 71 LISTIEGHTKS-ISAVKFSPCGKFLGTSSADKTVKIWNM------SDLS--CERTLTGHK 121
Query: 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 323
V +S DS+ + + S D +K++ + + + + L + H+ V F+ S ++S
Sbjct: 122 LGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTL-KGHTNYVFCCNFNPQSSLVVS 180
Query: 324 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 383
SFD + RI +++G +K HS V+ F DGS + + S D V++WD + C+
Sbjct: 181 GSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCV 240
Query: 384 QTFKPP--PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREG 441
+T PP+ S N ++ N D+ T ++ +G+ +K + +
Sbjct: 241 KTLVDDENPPVAFVKFSPNGKYILSSNLDN------TLKLWDFG-KGKTLKQYQGHENNK 293
Query: 442 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 501
A G+WI ED +Y ++ Q+ ++ ++ H + VI HP +N++A+
Sbjct: 294 YCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASG 353
Query: 502 G--EDCTMKLWK 511
D T+++W+
Sbjct: 354 ALEPDNTIRIWR 365
Score = 218 (81.8 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 67/262 (25%), Positives = 115/262 (43%)
Query: 253 YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSL 312
Y+ T H +++ ++FS + L + S D +K+W + C R L H GV
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLT-GHKLGVNDF 127
Query: 313 VFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTV 372
+S D I++ S D T +I+ + + K+ K +GH++YV F S VV+ S D +V
Sbjct: 128 AWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESV 187
Query: 373 KVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVV 431
++WD+++ C++T P S S F ++ I + + I T GQ V
Sbjct: 188 RIWDVRTGMCVKTL----PAHSDPVSAVS---FNRDGSLITSGSYDGLVRIWDTANGQCV 240
Query: 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491
K+ + FV SP G++I D L + GK + HE + +
Sbjct: 241 KTLVDDENPPVAFVK--FSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFA 298
Query: 492 H---PHRNLLATYGEDCTMKLW 510
+ + + EDC + +W
Sbjct: 299 NFSVTGGKWIISGSEDCKIYVW 320
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 275 (101.9 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 84/313 (26%), Positives = 141/313 (45%)
Query: 201 PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
P S T+ ++ +FS DG+ L S S D I Y + + E F
Sbjct: 13 PYVHSQTLTSHNRA-VSSVKFSSDGRLLASASADKTIRT--YTINTINDPIAEPVQE-FT 68
Query: 261 MHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
H+ + + FS D+ + S S D +K+W + +G ++ L H+ + F+ +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI-GHTNYAFCVNFNPQSNM 127
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S SFD T RI + +GK LK HS V F DGS +V++S D ++WD +
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTG 187
Query: 381 DCLQTF--KPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQGQVVKSFSSG 437
C++T PP+ S N + D+ + + N +S+ ++ T G V +
Sbjct: 188 HCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCIS 247
Query: 438 KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNL 497
A V+ G+ I ED ++ + S KL ++ H + V+ V HP NL
Sbjct: 248 S-------AFSVT-NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENL 299
Query: 498 LATYGEDCTMKLW 510
+A+ D T+++W
Sbjct: 300 IASGSLDKTVRIW 312
Score = 260 (96.6 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 60/190 (31%), Positives = 98/190 (51%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
D+ +L T+ G ++A C F+P +VS SFD + +WD +GK K L
Sbjct: 99 DVETGSLIKTL-IGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLP----- 152
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
H + V ++F+RD ++ S S DG ++W +G C++ L + V+ + FS +
Sbjct: 153 ---AHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGH--SSY-VNDAIFTNDGSRVVTASSDCTVKV 374
G IL + D+T R+ + S K LK + GH + Y ++ A +G R+V+ S D V +
Sbjct: 210 GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHM 269
Query: 375 WDLKSTDCLQ 384
W+L S LQ
Sbjct: 270 WELNSKKLLQ 279
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/160 (28%), Positives = 79/160 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
F+ DG +VS S+DG +WD +G K L D+ + V + FS + + +
Sbjct: 163 FNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL---IDD----ENPPVSFVRFSPNGKFILV 215
Query: 281 GSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFS-RDGSQILSTSFDSTARIHGLKSG 338
G+ D +++W I S + L+ +++ S FS +G +I+S S D+ + L S
Sbjct: 216 GTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSK 275
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
KLL++ GH+ V + + + + S D TV++W K
Sbjct: 276 KLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQK 315
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 294 (108.6 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 95/345 (27%), Positives = 163/345 (47%)
Query: 177 LPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVS-CSFDG 235
LPP + + A +V+ + L H + S C RFS DG++L + C+
Sbjct: 235 LPPSQKKEGVDWYAVFNPEVQRVLDVELVHHLVHD--SVVCCVRFSRDGKYLATGCNRSA 292
Query: 236 FIEVWDYLSGKLKKDLQYQA-DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS 294
+++D G+ LQ ++ D++ ++ +V C FS D + LA+G++D +I+VW I +
Sbjct: 293 --QIFDVTLGQNVAVLQDESVDKSGDLYIRSV-C--FSPDGKYLATGAEDKQIRVWDIAT 347
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
+ ++ + H + + SL F+ +G I S S D T R+ + GKL+ V
Sbjct: 348 -RTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTV 405
Query: 355 IFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV- 413
+ DG V S D TV+VWD + ++ + P G SV SV P + +
Sbjct: 406 AMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPD---GHKDSVYSVAFAPNGKELVSG 462
Query: 414 VCNKTSSIYIMTLQGQVVKSFSSGKR-----EGG-DFV-AACVSPKGEWIYCVGEDRNLY 466
+KT ++ + L Q S G + EG DFV + C++P G W+ +DR +
Sbjct: 463 SLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQ 522
Query: 467 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ +G + +++ H+ VI V P NL AT D ++W+
Sbjct: 523 FWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWR 567
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/262 (21%), Positives = 111/262 (42%)
Query: 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL--ERAHSEG---VTSLVF 314
++HD V C+ FSRD + LA+G + +++ + GQ + L E G + S+ F
Sbjct: 266 LVHDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCF 324
Query: 315 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
S DG + + + D R+ + + + F GH + F +G + + S D TV++
Sbjct: 325 SPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRL 384
Query: 375 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQ---GQV 430
WD+ + T + S + +++ + D V V + T+ + L+ G
Sbjct: 385 WDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHK 444
Query: 431 VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT 490
+S G + + K ++ + R Y + + GK + H+ V+ V
Sbjct: 445 DSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVC 504
Query: 491 HHPHRNLLATYGEDCTMKLWKP 512
P + + + +D ++ W P
Sbjct: 505 LTPDGHWVMSGSKDRGVQFWDP 526
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 284 (105.0 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 96/332 (28%), Positives = 159/332 (47%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVS-CSFDGFIEVWDYLSGKLK 248
A Q V + L HT++ +S C RFS DG+++ + C+ +++D +G+
Sbjct: 278 AIFNQAVPRVLDVDLVHTLQH--ESVVCCVRFSADGKYVATGCNRSA--QIFDVNTGEKV 333
Query: 249 KDLQYQ-ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
LQ AD T ++ +V C FS D + LA+G++D +I+VW I + + +R H +
Sbjct: 334 CVLQDDNADTTGDLYIRSV-C--FSPDGKYLATGAEDKQIRVWDITT-RTIRIQFAGHEQ 389
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
+ SL F+RDG I S S D T R+ +++G L F AI + D V S
Sbjct: 390 DIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDGVTTVAI-SPDTKYVAAGS 448
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIY-IMT 425
D +V+VWDL ++ + P G SV SV P D + +KT ++ + T
Sbjct: 449 LDKSVRVWDLTQGCPVERLEGPD---GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELAT 505
Query: 426 LQGQVVKSFSSGKR-----EGG-DFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
+G + S G R EG DFV + ++P +W+ +DR + + ++G + +
Sbjct: 506 PRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLM 565
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ H+ VI V P AT D ++W
Sbjct: 566 LQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/271 (21%), Positives = 116/271 (42%)
Query: 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ--CLRRLERAHSEG---VTSLVF 314
+ H+ V C+ FS D + +A+G + +++ + +G+ C+ + + A + G + S+ F
Sbjct: 296 LQHESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCF 354
Query: 315 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
S DG + + + D R+ + + + +F GH + F DG + + S D TV++
Sbjct: 355 SPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRL 414
Query: 375 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKS 433
WD+++ L F + G V +V + P + ++ + S+ + L QG V+
Sbjct: 415 WDIENGTALTVFT----IEDG---VTTVAISP-DTKYVAAGSLDKSVRVWDLTQGCPVER 466
Query: 434 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFS---------HQSGKLEHLMKVHE- 483
+ SP G + D+ + + +Q K +K E
Sbjct: 467 LEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEG 526
Query: 484 -KD-VIGVTHHPHRNLLATYGEDCTMKLWKP 512
+D V+ V P + + +D ++ W P
Sbjct: 527 HRDFVLSVALTPDNQWVMSGSKDRGVQFWDP 557
Score = 139 (54.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 49/199 (24%), Positives = 85/199 (42%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQ 254
D+E+ T+ TI+ G + A SPD +++ + S D + VWD G + L+
Sbjct: 416 DIENGTALTV-FTIEDGVTTVA----ISPDTKYVAAGSLDKSVRVWDLTQGCPVERLE-G 469
Query: 255 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI------------RSGQCLRRLE 302
D H ++V + FS + L +GS D IK+W + + G+C++ E
Sbjct: 470 PDG----HKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFE 525
Query: 303 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
H + V S+ + D ++S S D + ++G +GH + V + G
Sbjct: 526 -GHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGF 584
Query: 363 VVTASSDCTVKVWDLKSTD 381
T S D ++W D
Sbjct: 585 FATGSGDMRARIWSYTRMD 603
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 253 (94.1 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 57/191 (29%), Positives = 96/191 (50%)
Query: 197 EDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQAD 256
ED P I G ++ +F P +VS S D I+VWD+ SG+ ++ L+
Sbjct: 90 EDALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKG--- 146
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
H V I+F + +LAS S D IK+W ++ C++ L H V+ + F+
Sbjct: 147 -----HTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLH-GHDHNVSCVRFTP 200
Query: 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
G Q++S+S D T ++ +G +K GH +V + DGS + + S+D T+K W+
Sbjct: 201 SGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Query: 377 LKSTDCLQTFK 387
+ +CL T++
Sbjct: 261 IVKGECLATYR 271
Score = 196 (74.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 51/162 (31%), Positives = 73/162 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D T+K G + + F G L SCS D I++WD+ + Y
Sbjct: 132 VWDFESGEFERTLK-GHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQT--------YDC 182
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+T HD V C+ F+ + L S S+D IKVW +G C++ L H + V + S
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLV-GHEDWVRKITVS 241
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
DGS I S S D T + + G+ L +R HS V F+
Sbjct: 242 EDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 135 (52.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
LA+GS+D IK+W + +G+CL H V ++ F G +LS D T R+ +
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYI-GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 338 GKLLKEFR-GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
G+ +K H+ +++ F + T D +KVW L+
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 126 (49.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 53/181 (29%), Positives = 81/181 (44%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+T + H++ V I S D +AS S D IK W I G+CL R HS V L FS
Sbjct: 226 KTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATY-REHSHVVECLAFST 284
Query: 317 DGSQILSTSFDSTARIHGLKSGKL-LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
+ I+ D + GK +K+ G + V + GSR D T+K+W
Sbjct: 285 --ANII----DIPGSLLSTPEGKSKVKQGPG-GNLVGQCGYLATGSR------DKTIKIW 331
Query: 376 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYIMTLQGQVVKSF 434
+L + CL T+ G D V +V P + V + KT ++ + QG+ +K+
Sbjct: 332 ELATGRCLATYI------GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIA-QGRCIKTI 384
Query: 435 S 435
+
Sbjct: 385 N 385
Score = 124 (48.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 346 GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLF 405
GH + +N F S +V+AS D T+KVWD +S + +T L+G +V + F
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERT------LKGHTNAVQDID-F 156
Query: 406 PKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGED 462
K + + C+ +I + Q VK+ G D +CV +P G+ + D
Sbjct: 157 DKTGNLLASCSADLTIKLWDFQTYDCVKTL-----HGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 463 RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ + + +G + HE V +T + +A+ D T+K W
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Score = 66 (28.3 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGK-LEHLMKVHEKDVIGVT---HHPHRNLLATYGEDCT 506
P G+++ VG+D+ + + G+ ++ + + H + + H+PH +AT G D
Sbjct: 356 PCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPH---IATGGVDDV 412
Query: 507 MKLWK 511
+K+WK
Sbjct: 413 IKVWK 417
Score = 38 (18.4 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 498 LATYGEDCTMKLWK 511
LAT D T+K+W+
Sbjct: 319 LATGSRDKTIKIWE 332
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 288 (106.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 86/312 (27%), Positives = 145/312 (46%)
Query: 203 TLSHTIKFGTKSHAECAR---FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETF 259
T + T++ K H + R FS D + + S S D + +W+ +G L+ TF
Sbjct: 334 TATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLR--------HTF 385
Query: 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS 319
H+++V+ + F+ DS LAS S G +K+W R+G LE H + V S+ FS D
Sbjct: 386 EDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLE-GHDDCVNSVSFSPDSR 444
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+ S S D T +I +G L + GH+ +V +F++D + +AS D TVK+WD +
Sbjct: 445 LLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDT-A 503
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGK 438
T LQ L D V SV +F + + + ++ I T G + + G
Sbjct: 504 TVPLQN-----NLESHDNWVRSV-VFSHDSRLLASASDDMTVKIWDTATGSLENTLE-GH 556
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 498
+ + V+ SP + +D + + +G ++H + I + NLL
Sbjct: 557 DDRVNSVS--FSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLL 614
Query: 499 ATYGEDCTMKLW 510
A+ +D T+K+W
Sbjct: 615 ASAMDDGTVKIW 626
Score = 266 (98.7 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 69/186 (37%), Positives = 94/186 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FS D + L S S DG +++WD + L+ L+ H+E V + FS DS +LAS
Sbjct: 271 FSHDSRLLASASGDGTVKIWDTATSFLQNTLEG--------HNEWVKSVVFSHDSRLLAS 322
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG +K+W +G L+R+ + H++ V S+VFS D I S S D T RI +G L
Sbjct: 323 ASDDGTVKIWDTATGT-LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLL 381
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
F H V F +D R+ +AS VK+WD + T LQ L G D VN
Sbjct: 382 RHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTR-TGSLQNV-----LEGHDDCVN 435
Query: 401 SVHLFP 406
SV P
Sbjct: 436 SVSFSP 441
Score = 251 (93.4 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 67/252 (26%), Positives = 118/252 (46%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F HD V + FS DS +LAS S DG +K+W + LE H+E V S+VFS D
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLE-GHNEWVKSVVFSHDS 317
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
+ S S D T +I +G L + +GH+ V +F++D + + S+D TV++W+
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETT 377
Query: 379 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 438
+ TF+ + SV +V F + + + ++ I + +++ G
Sbjct: 378 TGLLRHTFEDH------EDSVMAVS-FAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGH 430
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 498
+ + V+ SP + +DR + + +G L+ ++ H V V L+
Sbjct: 431 DDCVNSVS--FSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 499 ATYGEDCTMKLW 510
A+ +D T+K+W
Sbjct: 489 ASASDDMTVKIW 500
Score = 237 (88.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 57/187 (30%), Positives = 94/187 (50%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
D + L +T++ G + FS D + L S S DG +++WD +G L++ L+
Sbjct: 291 DTATSFLQNTLE-GHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKG---- 345
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
H+++V + FS DS ++ASGS D +++W +G LR H + V ++ F+ D
Sbjct: 346 ----HNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG-LLRHTFEDHEDSVMAVSFAHD 400
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
++ S S +I ++G L GH VN F+ D + +AS D TVK+W
Sbjct: 401 SRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHA 460
Query: 378 KSTDCLQ 384
+T LQ
Sbjct: 461 -ATGSLQ 466
Score = 207 (77.9 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 54/184 (29%), Positives = 85/184 (46%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH 262
+L T++ G FS D + + S S D +++WD + L+ +L+ H
Sbjct: 464 SLQRTLE-GHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLE--------SH 514
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
D V + FS DS +LAS S D +K+W +G LE H + V S+ FS D +
Sbjct: 515 DNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLE-GHDDRVNSVSFSPDSRLLA 573
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
S S D T +I +G + F G F++ + + +A D TVK+WD++
Sbjct: 574 SASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSL 633
Query: 383 LQTF 386
TF
Sbjct: 634 RHTF 637
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 245 (91.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 83/342 (24%), Positives = 152/342 (44%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F + ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ + +G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI------ 421
+D TV+VW + + +C LR + V + P++ H + T S
Sbjct: 254 NDQTVRVWVVATKEC------KAELREHEHVVECISWAPESA-HPTISEATGSENKKSGK 306
Query: 422 ---YIMT-LQGQVVKSF--SSGK----REGGD-FVAACV-SPKGEWIYCVGEDRNLYCFS 469
++++ + + +K + S+G G D +V + P G ++ +D+ L +
Sbjct: 307 PGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWD 366
Query: 470 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+++ + + HE V + H + T D T+K+W+
Sbjct: 367 YKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 60/204 (29%), Positives = 87/204 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG L SCS D + VW + +
Sbjct: 209 SASRDKTMKMWEVATGYCVKTFT-GHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKE 267
Query: 247 LKKDLQYQAD--ETFMMHDETVL-CIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L+ E E+ I + SE L SGS+D IK+W I +
Sbjct: 268 CKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDIST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ++S + D T RI K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKASPYVVTGSVDQTVKVWECR 410
Score = 71 (30.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 16/83 (19%), Positives = 40/83 (48%)
Query: 1 MTLEIEARDVI-KIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAI 59
M L RD + + + + + N ++ + T + E ++ +N D ++ A + +W ++
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDVN--DELDKKFAGLLEKKWTSV 58
Query: 60 LPQVAQLKLPRNKLEDLYEQIVL 82
+ ++ +KL + E+I L
Sbjct: 59 IRLQKKVMELESKLNEAKEEITL 81
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 272 (100.8 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 74/250 (29%), Positives = 121/250 (48%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H+ VL + +S DS +LAS S D +K+W +G LE HS+ V S++FS D S++
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLE-GHSDLVRSVIFSHD-SRL 352
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
L+++ DST +I +G L GH +V IF++D + +AS D TVK+WD T
Sbjct: 353 LASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT-GTG 411
Query: 382 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREG 441
LQ L G V SV +F + + + S++ I ++ G R
Sbjct: 412 SLQH-----TLEGHRDWVRSV-IFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR-- 463
Query: 442 GDFVAACV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLAT 500
D+V + + S + +DR + + + G +H ++ H V V+ LLA+
Sbjct: 464 -DWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLAS 522
Query: 501 YGEDCTMKLW 510
D T+++W
Sbjct: 523 ASNDQTVRIW 532
Score = 266 (98.7 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 62/184 (33%), Positives = 94/184 (51%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH 262
+L HT++ G + FS D Q L S S D +++WD +G L+ L+ H
Sbjct: 370 SLQHTLE-GHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEG--------H 420
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
+ V + FS DS++LAS S D +K+W +G LE H + V S++FS D +
Sbjct: 421 RDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE-GHRDWVRSVIFSHDSRLLA 479
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
S S D T RI + G GHSS V F++D + +AS+D TV++WD+++
Sbjct: 480 SASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSL 539
Query: 383 LQTF 386
TF
Sbjct: 540 QHTF 543
Score = 242 (90.2 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 58/164 (35%), Positives = 84/164 (51%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+S D + L S S D +++WD +G L+ L+ H + V + FS DS +LAS
Sbjct: 304 YSHDSRLLASASDDRTVKIWDTETGSLQHTLEG--------HSDLVRSVIFSHDSRLLAS 355
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S D +K+W +G LE H + V S++FS D + S S DST +I +G L
Sbjct: 356 AS-DSTVKIWDTGTGSLQHTLE-GHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 413
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
GH +V IF++D + +AS D TVK+WD T LQ
Sbjct: 414 QHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT-GTGSLQ 456
Score = 193 (73.0 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 61/215 (28%), Positives = 100/215 (46%)
Query: 297 CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIF 356
CL+ LE H V S+ +S D + S S D T +I ++G L GHS V IF
Sbjct: 288 CLQALE-GHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF 346
Query: 357 TNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 416
++D SR++ ++SD TVK+WD T LQ L G V SV +F + + +
Sbjct: 347 SHD-SRLLASASDSTVKIWDT-GTGSLQH-----TLEGHRDWVRSV-IFSHDSQLLASAS 398
Query: 417 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFSHQSGKL 475
S++ I ++ G R D+V + + S + + +D + + +G L
Sbjct: 399 DDSTVKIWDTGTGSLQHTLEGHR---DWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 476 EHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+H ++ H V V LLA+ +D T+++W
Sbjct: 456 QHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIW 490
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 248 (92.4 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 57/166 (34%), Positives = 85/166 (51%)
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS 272
K+ C FSPD Q L++C G + +W + KL + H V C FS
Sbjct: 22 KAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSG--------HTGPVKCCVFS 73
Query: 273 RDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI 332
D + AS S D ++ W S +C L AH V ++ FS DG +LS +D+ A I
Sbjct: 74 SDGRLFASASHDCSVRTWCNSSLKCTHTLT-AHRRSVETVSFSPDGQWLLSGGWDNRALI 132
Query: 333 HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
++SG LL+E +GH++ V ++F++D V T S D V+VW L+
Sbjct: 133 WSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLR 178
Score = 155 (59.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/154 (29%), Positives = 65/154 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G +C FS DG+ S S D + W + LK T H +V +
Sbjct: 62 GHTGPVKCCVFSSDGRLFASASHDCSVRTW--CNSSLK------CTHTLTAHRRSVETVS 113
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS D + L SG D + +W I+SG L L + H+ V S VFS D + + S+D
Sbjct: 114 FSPDGQWLLSGGWDNRALIWSIQSGALLEEL-KGHNAAVQSSVFSSDSQSVATGSWDRAV 172
Query: 331 RIHGLKSGKL-LKEFRGHSSYVNDAIFTNDGSRV 363
R+ L+ + +GH V F+ G V
Sbjct: 173 RVWKLRDRQAEAVVLQGHLGNVACLCFSVAGMLV 206
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/114 (33%), Positives = 58/114 (50%)
Query: 205 SHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264
+HT+ +S E FSPDGQ+L+S +D +W SG L ++L+ H+
Sbjct: 99 THTLTAHRRS-VETVSFSPDGQWLLSGGWDNRALIWSIQSGALLEELKG--------HNA 149
Query: 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
V FS DS+ +A+GS D ++VW++R Q + + H V L FS G
Sbjct: 150 AVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVVLQGHLGNVACLCFSVAG 203
Score = 131 (51.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 35/129 (27%), Positives = 54/129 (41%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H V C FS D ++L + GK+ +W+ + + L + H+ V VFS DG
Sbjct: 18 FSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVS-GHTGPVKCCVFSSDG 76
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D + R S K H V F+ DG +++ D +W ++
Sbjct: 77 RLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQ 136
Query: 379 STDCLQTFK 387
S L+ K
Sbjct: 137 SGALLEELK 145
Score = 108 (43.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG--KLLKEFRGHSSYVNDAI 355
+R R H V FS D Q+L T D+ +++ K+ KLL GH+ V +
Sbjct: 15 IRYFSR-HKAEVNCCAFSPD-CQLLLTCCDA-GKLYLWKTSTAKLLASVSGHTGPVKCCV 71
Query: 356 FTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
F++DG +AS DC+V+ W S C T
Sbjct: 72 FSSDGRLFASASHDCSVRTWCNSSLKCTHT 101
Score = 74 (31.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 450 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509
SP G+W+ G D +S QSG L +K H V +AT D +++
Sbjct: 115 SPDGQWLLSGGWDNRALIWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRV 174
Query: 510 WK 511
WK
Sbjct: 175 WK 176
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 260 (96.6 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 81/309 (26%), Positives = 139/309 (44%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH 262
TL K G + FSP G+ + S S D + VW+ +K Q +A F H
Sbjct: 9 TLERNFK-GHRDAITSLDFSPSGKQIASGSVDASVMVWN-----MKP--QSRAYR-FTGH 59
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
+ V C++FS + +LAS S+D +++W + S + L RAH+ V S+ FS DG +L
Sbjct: 60 KDAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLL 118
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
+ S D + ++ + K++ R H+++V A F+ DG +V+ S D TVK+WD S
Sbjct: 119 TASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQL 178
Query: 383 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG 442
+ TF P GG +S H P + I + +++ + ++ + +
Sbjct: 179 IHTFCEP----GGYSSYVDFH--PSSTC-IATASSDNTVRVWDIRTHTL--LQHYQVHSA 229
Query: 443 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 502
A P G + D L G+L + + H+ V+ + A+ G
Sbjct: 230 AVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAG 289
Query: 503 EDCTMKLWK 511
D + +W+
Sbjct: 290 SDQQVMVWR 298
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 255 (94.8 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 76/308 (24%), Positives = 144/308 (46%)
Query: 206 HTIKFGTKSHAECARFS-PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264
HT++ G ++ F+ P G + + SFD ++W +GK Y TF H
Sbjct: 128 HTLE-GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC-----YH---TFRGHTA 178
Query: 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 324
++C+ F+ S ++A+GS D K+W I+SG+ + L HS + SL F+ G++I++
Sbjct: 179 EIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLT-GHSAEIISLSFNTSGNRIITG 237
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
SFD T + +G+ + GH + ++ A+F D S ++T S D T K+WD + C+
Sbjct: 238 SFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVA 297
Query: 385 TFKPPPPLRGGDASV-NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGD 443
T L G D + +S + + T+ I+ + V K G G+
Sbjct: 298 T------LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKL--EGHE--GE 347
Query: 444 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGE 503
+P+G + D+ + Q+G+ +++ H ++ + +++ T +
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSK 407
Query: 504 DCTMKLWK 511
D T ++W+
Sbjct: 408 DNTCRIWR 415
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 44/153 (28%), Positives = 78/153 (50%)
Query: 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD-SEMLASGSQ 283
G ++ S+D ++WD SG+ +L T H V I F+ + +A+GS
Sbjct: 104 GSCFITGSYDRTCKLWDTASGE---ELH-----TLEGHRNVVYAIAFNNPYGDKIATGSF 155
Query: 284 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE 343
D K+W + +G+C R H+ + L F+ + + + S D+TA++ ++SG+ +
Sbjct: 156 DKTCKLWSVETGKCYHTF-RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFT 214
Query: 344 FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
GHS+ + F G+R++T S D TV VW+
Sbjct: 215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 247
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 269 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD-GSQILSTSFD 327
+ ++ +GS D K+W SG+ L LE H V ++ F+ G +I + SFD
Sbjct: 98 VALNKSGSCFITGSYDRTCKLWDTASGEELHTLE-GHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
T ++ +++GK FRGH++ + F + V T S D T K+WD++S
Sbjct: 157 KTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQS 208
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 258 (95.9 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 80/321 (24%), Positives = 144/321 (44%)
Query: 201 PTTLSHTIKFGTKSH---AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
P ++++ KF + H RFSPD + S DG ++VW +GKL Y
Sbjct: 161 PESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLI----Y---- 212
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
TF H + I +S D +ASGS D I++W + +G+ H V ++ FS
Sbjct: 213 TFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPK 272
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
G+ ++S S+D + ++S +++K HS V+ DG+ + + ++D V++WD
Sbjct: 273 GNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDT 332
Query: 378 KSTDCLQTF--KPPPPLRGGDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQGQVVKSF 434
+ CL+T + PP+ S N ++ D V + + + T QG K +
Sbjct: 333 STGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKY 392
Query: 435 SSGKREG--GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT-- 490
S G G + +P + ED + C+ + K+ ++ H+ V+GV
Sbjct: 393 SLSGAFGVYGQSIPGR-TPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTC 451
Query: 491 HHPHRNLLATYGEDCTMKLWK 511
+ + G D T+++W+
Sbjct: 452 STGEGRFMVSCGLDGTVRVWE 472
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 75 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 126
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 127 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 185
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 186 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 238
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 239 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 269
Score = 191 (72.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 32 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 91
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 92 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 147
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 148 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 204
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 205 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 260
Query: 509 LW 510
+W
Sbjct: 261 IW 262
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 31 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 83
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 84 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 142
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 143 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 196
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 197 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 246
Query: 452 KGEWI 456
W+
Sbjct: 247 NRYWL 251
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 96 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 149
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 150 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 207
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 208 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 265
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 148 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 203
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 204 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 257
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 258 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 315
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 235 (87.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 68/214 (31%), Positives = 107/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F++D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D+I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 69/245 (28%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ HS +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/180 (29%), Positives = 85/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D ++VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 233 (87.1 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 56/166 (33%), Positives = 91/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q+L + + G + ++ SGK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQYLATGTHMGKVNIFGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTF 270
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 58/240 (24%), Positives = 109/240 (45%)
Query: 230 SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289
S S D I +WD +GK K + + + + FS DS+ LA+G+ GK+ +
Sbjct: 81 SSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL--------AFSPDSQYLATGTHMGKVNI 132
Query: 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS 349
+ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 133 FGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDDT 245
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
H V + S+ + + + + +F + + + G I VG+D+ ++ +
Sbjct: 246 -HFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 42/156 (26%), Positives = 78/156 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + +GS++V+ D + V+D
Sbjct: 267 IHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 60/278 (21%), Positives = 118/278 (42%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+V+ S D ++VW + +L +LQ+ + H V+ ++ S + AS S D I
Sbjct: 35 VVTGSLDDLVKVWKWRDERL--ELQWSLEG----HQLGVVSVDISHTLPIAASSSLDAHI 88
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLLKEFRG 346
++W + +G+ ++ ++ + T L FS D SQ L+T I G++SGK
Sbjct: 89 RLWDLENGKQMKSIDAGPVDAWT-LAFSPD-SQYLATGTHMGKVNIFGVESGKKEYSLDT 146
Query: 347 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 406
++ ++ DG + + + D + ++D+ + L T L G + S+ P
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSLTFSP 200
Query: 407 KNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLY 466
+ +V + I I +Q + SG VA C P D+++
Sbjct: 201 DS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSSDKSVK 257
Query: 467 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+ + H H+ V GV ++ + + + + G+D
Sbjct: 258 VWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 233 (87.1 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 56/166 (33%), Positives = 90/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q L + S G + ++ +GK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQHLATGSHVGKVNIFGVETGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH S+V + F+ D + V++SSD +VKVWD+ + C+ TF
Sbjct: 225 AATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTF 270
Score = 189 (71.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 43/156 (27%), Positives = 78/156 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSTDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H V ++ FS D + +S+S D + ++ + +
Sbjct: 208 ASDDGYIKIYDVQHASLAATLS-GHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + +GS++V+ D + V+D
Sbjct: 267 VHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 59/284 (20%), Positives = 122/284 (42%)
Query: 222 SPDG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
S DG + ++S S D ++VW + +L ++Q+ + H V+ ++ S ++AS
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERL--EMQWALEG----HQLGVVSVDVSPSGNIMAS 81
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S D I++W + SG+ +R ++ A S+ FS D + + S I G+++GK
Sbjct: 82 SSLDAHIRLWDLESGKQIRSID-AGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKK 140
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
++ ++ DG + + + D + ++D+ + L T L G +
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIR 194
Query: 401 SVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 460
S+ F + +V + I I +Q + + SG G + SP
Sbjct: 195 SL-TFSTDSQLLVTASDDGYIKIYDVQHASLAATLSG--HGSWVLNVAFSPDDAHFVSSS 251
Query: 461 EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
D+++ + + H H+ V GV ++ + + + + G+D
Sbjct: 252 SDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDD 295
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 53/221 (23%), Positives = 101/221 (45%)
Query: 298 LRRLERAHSEGVTSLVF---SRDGSQ-ILSTSFDSTARIHGLKSGKLLKEF--RGHSSYV 351
L + E AH + + S+ + S DGS+ ++S S D ++ +L ++ GH V
Sbjct: 8 LFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGV 67
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
+ G+ + ++S D +++WDL+S +++ P DA SV P + H
Sbjct: 68 VSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPV----DAW--SVAFSPDS-QH 120
Query: 412 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFS 469
+ + + I ++ G+ K +S R G F+ + SP G+++ D + F
Sbjct: 121 LATGSHVGKVNIFGVETGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 470 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+GKL H ++ H + +T LL T +D +K++
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIY 217
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 233 (87.1 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 67/214 (31%), Positives = 108/214 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSADNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLER-AHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +H+E V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD +
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGD-T 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 186 (70.5 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 66/242 (27%), Positives = 105/242 (43%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R R HS V+ +V S DG LS S+D T R
Sbjct: 29 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F+ D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGV-CKYTIQDDSH 147
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 148 TEW----VSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + D I + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDTINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 68/245 (27%), Positives = 107/245 (43%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKTIIMW-----KLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ H+ +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR----EGGDFV-AACVSP 451
+N+V + P +C GQ + + GK +GGD + A C SP
Sbjct: 194 YLNTVTVSPDGS----LCASGGK------DGQAMLWDLNEGKHLYTLDGGDTINALCFSP 243
Query: 452 KGEWI 456
W+
Sbjct: 244 NRYWL 248
Score = 142 (55.0 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 52/180 (28%), Positives = 86/180 (47%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q D++
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTL-GVCKYTIQ---DDS-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 147 -HTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G + +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDGGDT-INALCFSPNRYWLCAATGP-SIKIWDLE 262
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 233 (87.1 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 68/214 (31%), Positives = 106/214 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D + L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGDI- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 68/261 (26%), Positives = 112/261 (42%)
Query: 258 TFMMHDETVLCIEFSRDSEML-ASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSL 312
T H+ V + +++ L S +D I +W++ + +R R HS V+ +
Sbjct: 10 TLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 313 VFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTV 372
V S DG LS S+D T R+ L +G + F GH+ V F++D ++V+ S D T+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 373 KVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVV 431
K+W+ C T + V+ V P + + I+V C + + L +
Sbjct: 130 KLWNTLGV-CKYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKL 184
Query: 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VT 490
K+ G G VSP G G+D + GK HL + D+I +
Sbjct: 185 KTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALC 240
Query: 491 HHPHRN-LLATYGEDCTMKLW 510
P+R L A G ++K+W
Sbjct: 241 FSPNRYWLCAATGP--SIKIW 259
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 52/180 (28%), Positives = 84/180 (46%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 93 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 146
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D + VW + + + L+ H+ + ++ S DG
Sbjct: 147 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 204
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S S D A + L GK L G +N F+ + + A+ ++K+WDL+
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGP-SIKIWDLE 262
Score = 126 (49.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 44/178 (24%), Positives = 76/178 (42%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+SH+E C RFSP+ +VSC +D + VW+ + KLK + T ++ TV
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTN---HIGHTGYLNTVTV- 200
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--------GS 319
S D + ASG +DG+ +W + G+ L L+ + + +L FS + G
Sbjct: 201 ----SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAATGP 254
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I + + LK + + ++ DG + +D V+VW +
Sbjct: 255 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 312
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 254 (94.5 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 69/206 (33%), Positives = 102/206 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S E R + + +V+ S G I VWD + K+ + T M H + ++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR--------TLMGHKANICSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + + P
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 391 -PLRGGDASVNSVHLFPKNPDHIVVC 415
P+R + V V L P P +V C
Sbjct: 232 GPVRYAGSWV--VGLSP--PPKVVGC 253
Score = 155 (59.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 57/166 (34%), Positives = 89/166 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD QFL + S G + ++ +GK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQFLATGSHVGKVNIFGVETGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH S+V + F D + V++SSD +VKVWD + C+ TF
Sbjct: 225 AGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTF 270
Score = 187 (70.9 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 54/202 (26%), Positives = 93/202 (46%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S G S S D I +WD +GK K + + + + FS DS+ LA+G
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSL--------AFSPDSQFLATG 124
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S GK+ ++ + +G+ L+ + + S+ +S DG + S + D I + +GKLL
Sbjct: 125 SHVGKVNIFGVETGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 401
GH+ + F+ D +VTAS D +K++D++ + T L G + V +
Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHGSWVLN 237
Query: 402 VHLFPKNPDHIVVCNKTSSIYI 423
V P + H V + S+ +
Sbjct: 238 VAFCPDDT-HFVSSSSDKSVKV 258
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 41/156 (26%), Positives = 75/156 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H V ++ F D + +S+S D + ++ +
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + GS++V+ D + ++D
Sbjct: 267 VHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 66/283 (23%), Positives = 121/283 (42%)
Query: 224 DG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282
DG + ++S S D ++VW + KL DLQ+ T H V+ ++ S + AS S
Sbjct: 30 DGSETVISGSLDDLVKVWKWNDEKL--DLQW----TLEGHQLGVVSVDISHTGSIAASSS 83
Query: 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKLL 341
D I++W + +G+ ++ ++ A SL FS D SQ L+T S I G+++GK
Sbjct: 84 LDAHIRLWDLETGKQIKSID-AGPVDAWSLAFSPD-SQFLATGSHVGKVNIFGVETGKKE 141
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 401
++ ++ DG + + + D + ++D+ + L T L G + S
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRS 195
Query: 402 VHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE 461
+ P + +V + I I +Q + SG VA C P
Sbjct: 196 LTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC--PDDTHFVSSSS 252
Query: 462 DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
D+++ + + H H+ V GV ++ + + + G+D
Sbjct: 253 DKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDD 295
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 52/221 (23%), Positives = 99/221 (44%)
Query: 298 LRRLERAHSEGVTSLVFSR---DGSQ-ILSTSFDSTARIHGLKSGKLLKEF--RGHSSYV 351
L + E+AH + + S+ + + DGS+ ++S S D ++ KL ++ GH V
Sbjct: 8 LFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGV 67
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
++ GS ++S D +++WDL +T K + G S+ P +
Sbjct: 68 VSVDISHTGSIAASSSLDAHIRLWDL------ETGKQIKSIDAGPVDAWSLAFSPDS-QF 120
Query: 412 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFS 469
+ + + I ++ G+ K +S R G F+ + SP G+++ D + F
Sbjct: 121 LATGSHVGKVNIFGVETGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 470 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+GKL H ++ H + +T P LL T +D +K++
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 57/166 (34%), Positives = 89/166 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD QFL + S G + ++ +GK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQFLATGSHVGKVNIFGVETGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH S+V + F D + V++SSD +VKVWD + C+ TF
Sbjct: 225 AGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTF 270
Score = 187 (70.9 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 54/202 (26%), Positives = 93/202 (46%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S G S S D I +WD +GK K + + + + FS DS+ LA+G
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSL--------AFSPDSQFLATG 124
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S GK+ ++ + +G+ L+ + + S+ +S DG + S + D I + +GKLL
Sbjct: 125 SHVGKVNIFGVETGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 401
GH+ + F+ D +VTAS D +K++D++ + T L G + V +
Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHGSWVLN 237
Query: 402 VHLFPKNPDHIVVCNKTSSIYI 423
V P + H V + S+ +
Sbjct: 238 VAFCPDDT-HFVSSSSDKSVKV 258
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 41/156 (26%), Positives = 75/156 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H V ++ F D + +S+S D + ++ +
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + GS++V+ D + ++D
Sbjct: 267 VHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 64/278 (23%), Positives = 118/278 (42%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
++S S D ++VW + KL DLQ+ T H V+ ++ S + AS S D I
Sbjct: 35 VISGSLDDLVKVWKWNDEKL--DLQW----TLEGHQLGVVSVDISHTGSIAASSSLDAHI 88
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKLLKEFRG 346
++W + +G+ ++ ++ A SL FS D SQ L+T S I G+++GK
Sbjct: 89 RLWDLETGKQIKSID-AGPVDAWSLAFSPD-SQFLATGSHVGKVNIFGVETGKKEYSLDT 146
Query: 347 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 406
++ ++ DG + + + D + ++D+ + L T L G + S+ P
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSLTFSP 200
Query: 407 KNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLY 466
+ +V + I I +Q + SG VA C P D+++
Sbjct: 201 DS-QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC--PDDTHFVSSSSDKSVK 257
Query: 467 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+ + H H+ V GV ++ + + + G+D
Sbjct: 258 VWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDD 295
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 51/221 (23%), Positives = 99/221 (44%)
Query: 298 LRRLERAHSEGVTSLVFSRD---GSQ-ILSTSFDSTARIHGLKSGKLLKEF--RGHSSYV 351
L + E+AH + + S+ + ++ GS+ ++S S D ++ KL ++ GH V
Sbjct: 8 LFKQEQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGV 67
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
++ GS ++S D +++WDL +T K + G S+ P +
Sbjct: 68 VSVDISHTGSIAASSSLDAHIRLWDL------ETGKQIKSIDAGPVDAWSLAFSPDS-QF 120
Query: 412 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFS 469
+ + + I ++ G+ K +S R G F+ + SP G+++ D + F
Sbjct: 121 LATGSHVGKVNIFGVETGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 470 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+GKL H ++ H + +T P LL T +D +K++
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 56/166 (33%), Positives = 91/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q+L + + G + ++ SGK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/240 (24%), Positives = 109/240 (45%)
Query: 230 SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289
S S D I +WD +GK K + + + + FS DS+ LA+G+ GK+ +
Sbjct: 81 SSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVNI 132
Query: 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS 349
+ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 133 FGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDDT 245
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
H V + S+ + + + V +F + + + G I VG+D+ ++ +
Sbjct: 246 -HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 179 (68.1 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + +GS++V+ D + ++D
Sbjct: 267 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 62/282 (21%), Positives = 120/282 (42%)
Query: 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ 283
+ + +V+ S D ++VW + KL DLQ+ + H V+ ++ S + AS S
Sbjct: 31 NSETVVTGSLDDLVKVWKWRDEKL--DLQWSLEG----HQLGVVSVDISHTLPIAASSSL 84
Query: 284 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLLK 342
D I++W + +G+ ++ ++ + T L FS D SQ L+T I G++SGK
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPD-SQYLATGTHVGKVNIFGVESGKKEY 142
Query: 343 EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV 402
++ ++ DG + + + D + ++D+ + L T L G + S+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSL 196
Query: 403 HLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED 462
P + +V + I I +Q + SG VA C P D
Sbjct: 197 TFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSSD 253
Query: 463 RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+++ + + H H+ V GV ++ + + + + G+D
Sbjct: 254 KSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 56/166 (33%), Positives = 91/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q+L + + G + ++ SGK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/240 (24%), Positives = 109/240 (45%)
Query: 230 SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289
S S D I +WD +GK K + + + + FS DS+ LA+G+ GK+ +
Sbjct: 81 SSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVNI 132
Query: 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS 349
+ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 133 FGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDDT 245
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
H V + S+ + + + V +F + + + G I VG+D+ ++ +
Sbjct: 246 -HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 179 (68.1 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + +GS++V+ D + ++D
Sbjct: 267 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/282 (21%), Positives = 120/282 (42%)
Query: 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ 283
+ + +V+ S D ++VW + +L DLQ+ + H V+ ++ S + AS S
Sbjct: 31 NSETVVTGSLDDLVKVWKWRDERL--DLQWSLEG----HQLGVVSVDISHTLPIAASSSL 84
Query: 284 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLLK 342
D I++W + +G+ ++ ++ + T L FS D SQ L+T I G++SGK
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPD-SQYLATGTHVGKVNIFGVESGKKEY 142
Query: 343 EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV 402
++ ++ DG + + + D + ++D+ + L T L G + S+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSL 196
Query: 403 HLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED 462
P + +V + I I +Q + SG VA C P D
Sbjct: 197 TFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSSD 253
Query: 463 RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+++ + + H H+ V GV ++ + + + + G+D
Sbjct: 254 KSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 56/166 (33%), Positives = 91/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q+L + + G + ++ SGK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 180 (68.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 42/156 (26%), Positives = 78/156 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + +GS++V+ D + V+D
Sbjct: 267 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 180 (68.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 59/240 (24%), Positives = 109/240 (45%)
Query: 230 SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289
S S D I +WD +GK K + + + + FS DS+ LA+G+ GK+ +
Sbjct: 81 SSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVNI 132
Query: 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS 349
+ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 133 FGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDDT 245
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
H V + S+ + + + V +F + + + G I VG+D+ ++ +
Sbjct: 246 -HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 61/282 (21%), Positives = 120/282 (42%)
Query: 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ 283
+ + +V+ S D ++VW + +L DLQ+ + H V+ ++ S + AS S
Sbjct: 31 NSETVVTGSLDDLVKVWKWCDERL--DLQWSLEG----HQLGVVSVDISHTLPIAASSSL 84
Query: 284 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLLK 342
D I++W + +G+ ++ ++ + T L FS D SQ L+T I G++SGK
Sbjct: 85 DAHIRLWDLDNGKQIKSIDAGPVDAWT-LAFSPD-SQYLATGTHVGKVNIFGVESGKKEY 142
Query: 343 EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV 402
++ ++ DG + + + D + ++D+ + L T L G + S+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSL 196
Query: 403 HLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED 462
P + +V + I I +Q + SG VA C P D
Sbjct: 197 TFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSSD 253
Query: 463 RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+++ + + H H+ V GV ++ + + + + G+D
Sbjct: 254 KSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 56/166 (33%), Positives = 91/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q+L + + G + ++ SGK +Y D + +L I +S D + LAS
Sbjct: 96 FSPDSQYLATGTHVGKVNIFGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 147
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 148 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 206
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 207 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 252
Score = 179 (68.1 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 138 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 189
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 190 ASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 248
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + +GS++V+ D + ++D
Sbjct: 249 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 168 (64.2 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 55/233 (23%), Positives = 106/233 (45%)
Query: 237 IEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ 296
+ +WD +GK K + + + + FS DS+ LA+G+ GK+ ++ + SG+
Sbjct: 70 VRLWDLENGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVNIFGVESGK 121
Query: 297 CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIF 356
L+ + + S+ +S DG + S + D I + +GKLL GH+ + F
Sbjct: 122 KEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 180
Query: 357 TNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 416
+ D +VTAS D +K++D++ + T L G + V +V P + H V +
Sbjct: 181 SPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDDT-HFVSSS 233
Query: 417 KTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
S+ + + + V +F + + + G I VG+D+ ++ +
Sbjct: 234 SDKSVKVWDVGTRTCVHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHIY 283
Score = 45 (20.9 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQAD 256
+ + +V+ S D ++VW + KL DLQ+ +
Sbjct: 31 NSETVVTGSLDDLVKVWKWRDEKL--DLQWSLE 61
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 56/166 (33%), Positives = 91/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q+L + + G + ++ SGK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Score = 179 (68.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 230 SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289
S S D I +WD +GK K + + + + FS DS+ LA+G+ GK+ +
Sbjct: 81 SSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL--------AFSPDSQYLATGTHVGKVNI 132
Query: 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS 349
+ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 133 FGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
+ F+ D +VTAS D +K++D++ + T
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 227
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVT 365
+ F H V + +GS++V+
Sbjct: 267 VHTFFDHQDQVWGVKYNGNGSKIVS 291
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 252 (93.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 120/523 (22%), Positives = 220/523 (42%)
Query: 20 ENSLQQTFQTLQNECQVSLNTVDSIETFVADINSG--RWDAILPQVAQ----LKLPRNKL 73
+ L + ++ E + N S + D +S + A + Q+ Q L+L K+
Sbjct: 9 QQRLTELLDAIKTEFDYASNEASSFKKVQEDYDSKYQQQAAEMQQIRQTVYDLELAHRKI 68
Query: 74 EDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVRTYFDAHEAYQ 133
++ YE+ +L + ELDT RQ + G +Q+Q ++ + + + Q
Sbjct: 69 KEAYEEEILRL--KNELDTRD---RQMKN-GFQQQQQQQQQQQQQQ---------QQQQQ 113
Query: 134 DSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQ-FDLFRGTAAM 192
+SV+ S+ + Q H +PP Q D+ +
Sbjct: 114 QIVAPPAAPPAPPTPVTSLSVIDKSQYIVNPTQRAN---HVKEIPPFLQDLDIAKANPEF 170
Query: 193 K-QDVED--MYPTTLSHTIKFG---TKSHAE---CARFSPDGQFLVSCSFDGFIEVWDYL 243
K Q +E +Y S + + H+ C RFS DG+F+ + + +V++
Sbjct: 171 KKQHLEYYVLYNPAFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIAT-GCNKTTQVFNVT 229
Query: 244 SGKLKKDL------QYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQC 297
+G+L L + + D T D + + FS D ++LA+G++D I++W + + +
Sbjct: 230 TGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRI 289
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
++ L R H + + SL F DG +++S S D + RI L++ + A+ +
Sbjct: 290 IKIL-RGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAV-S 347
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVH--LFPKNPDHIVVC 415
DG + S D TV+VWD ST + G+ +SV+ F N + I
Sbjct: 348 PDGKLIAAGSLDRTVRVWD--STTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASG 405
Query: 416 NKTSSIYIMTLQGQVVKSFSSGKREGG--DFV-AACVSPKGEWIYCVGEDRNLYCFSHQS 472
+ ++ + L+G+ K + G DFV + C +P E+I +DR + + S
Sbjct: 406 SLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS 465
Query: 473 GKLEHLMKVHEKDVIGVTHHPH----RNLLATYGEDCTMKLWK 511
G +++ H VI V + + AT DC ++WK
Sbjct: 466 GNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 252 (93.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 120/523 (22%), Positives = 220/523 (42%)
Query: 20 ENSLQQTFQTLQNECQVSLNTVDSIETFVADINSG--RWDAILPQVAQ----LKLPRNKL 73
+ L + ++ E + N S + D +S + A + Q+ Q L+L K+
Sbjct: 9 QQRLTELLDAIKTEFDYASNEASSFKKVQEDYDSKYQQQAAEMQQIRQTVYDLELAHRKI 68
Query: 74 EDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVRTYFDAHEAYQ 133
++ YE+ +L + ELDT RQ + G +Q+Q ++ + + + Q
Sbjct: 69 KEAYEEEILRL--KNELDTRD---RQMKN-GFQQQQQQQQQQQQQQ---------QQQQQ 113
Query: 134 DSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQ-FDLFRGTAAM 192
+SV+ S+ + Q H +PP Q D+ +
Sbjct: 114 QIVAPPAAPPAPPTPVTSLSVIDKSQYIVNPTQRAN---HVKEIPPFLQDLDIAKANPEF 170
Query: 193 K-QDVED--MYPTTLSHTIKFG---TKSHAE---CARFSPDGQFLVSCSFDGFIEVWDYL 243
K Q +E +Y S + + H+ C RFS DG+F+ + + +V++
Sbjct: 171 KKQHLEYYVLYNPAFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIAT-GCNKTTQVFNVT 229
Query: 244 SGKLKKDL------QYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQC 297
+G+L L + + D T D + + FS D ++LA+G++D I++W + + +
Sbjct: 230 TGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRI 289
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
++ L R H + + SL F DG +++S S D + RI L++ + A+ +
Sbjct: 290 IKIL-RGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAV-S 347
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVH--LFPKNPDHIVVC 415
DG + S D TV+VWD ST + G+ +SV+ F N + I
Sbjct: 348 PDGKLIAAGSLDRTVRVWD--STTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASG 405
Query: 416 NKTSSIYIMTLQGQVVKSFSSGKREGG--DFV-AACVSPKGEWIYCVGEDRNLYCFSHQS 472
+ ++ + L+G+ K + G DFV + C +P E+I +DR + + S
Sbjct: 406 SLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS 465
Query: 473 GKLEHLMKVHEKDVIGVTHHPH----RNLLATYGEDCTMKLWK 511
G +++ H VI V + + AT DC ++WK
Sbjct: 466 GNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 231 (86.4 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 56/166 (33%), Positives = 90/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q L + S G + ++ +GK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQHLATGSHVGKVNIFGVETGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH S+V + F+ D + V++SSD +VKVWD+ + C+ TF
Sbjct: 225 AATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTF 270
Score = 191 (72.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H V ++ FS D + +S+S D + ++ + +
Sbjct: 208 ASDDGYIKIYEVQHASLAATLS-GHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + +GS++V+ + D + V+D
Sbjct: 267 VHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 168 (64.2 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 60/284 (21%), Positives = 120/284 (42%)
Query: 222 SPDG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
S DG + ++S S D ++VW + +L +LQ T H V+ ++ S ++AS
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERL--ELQ----STLEGHQLGVVSVDVSPSGNIMAS 81
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S D I++W + SG+ +R ++ A S+ FS D + + S I G+++GK
Sbjct: 82 SSLDAHIRLWDLESGKQIRAID-AGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKK 140
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
++ ++ DG + + + D + ++D+ + L T L G +
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIR 194
Query: 401 SVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 460
S+ P + +V + I I +Q + + SG G + SP
Sbjct: 195 SLTFSPDS-QLLVTASDDGYIKIYEVQHASLAATLSG--HGSWVLNVAFSPDDTHFVSSS 251
Query: 461 EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
D+++ + + H H+ V GV ++ + + + + +D
Sbjct: 252 SDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADD 295
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/222 (24%), Positives = 102/222 (45%)
Query: 298 LRRLERAHSEGVTSLVF---SRDGSQ-ILSTSFDSTARIHGLKSGKL-LKE-FRGHSSYV 351
L + E AH + + S+ + S DGS+ ++S S D ++ +L L+ GH V
Sbjct: 8 LFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGV 67
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
+ G+ + ++S D +++WDL+S ++ P DA SV P + H
Sbjct: 68 VSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPV----DAW--SVAFSPDS-QH 120
Query: 412 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFS 469
+ + + I ++ G+ K +S R G F+ + SP G+++ D + F
Sbjct: 121 LATGSHVGKVNIFGVETGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 470 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+GKL H ++ H + +T P LL T +D +K+++
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYE 218
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 249 (92.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 68/198 (34%), Positives = 98/198 (49%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH 262
+L HTI+ G FSPDGQ L S S + I++WD + LK T H
Sbjct: 146 SLKHTIE-GHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLK--------HTLGGH 196
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
VL + FS D +LASGS D IK+W SG LE HS + SL FS +G +
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE-GHSNKIESLAFSPNGQLLA 255
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
S S D+T ++ +G +GHS V +F+ D + + S D T+K+WD +T
Sbjct: 256 SGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD-PATGI 314
Query: 383 LQ-TFKPPPPLRGGDASV 399
L+ + + P +R + S+
Sbjct: 315 LKHSMRTPGIVRSIEFSI 332
Score = 205 (77.2 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 54/159 (33%), Positives = 78/159 (49%)
Query: 230 SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289
S +F ++W+ G LK T H + VL + FS D ++LASGS + IK+
Sbjct: 130 SVAFSPNGQLWNPAIGSLK--------HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKL 181
Query: 290 WRIRSGQC-LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 348
W S C L+ HS V LVFS DG + S S D+T ++ SG L GHS
Sbjct: 182 WD--SATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHS 239
Query: 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
+ + F+ +G + + SSD T+K+WD + T K
Sbjct: 240 NKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLK 278
Score = 163 (62.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 46/123 (37%), Positives = 64/123 (52%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
VED + L T++ G E FSPDG+ L S S D I++WD SG LK+ L+
Sbjct: 26 VEDNWGPELQ-TLE-GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEG-- 81
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
H +V + FS + ++LASGS D IK+W S +E HS+ V S+ FS
Sbjct: 82 ------HSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTME-GHSDRVESVAFS 134
Query: 316 RDG 318
+G
Sbjct: 135 PNG 137
Score = 154 (59.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 37/104 (35%), Positives = 52/104 (50%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+T H + + + FS D +LASGS D IK+W SG + LE HS V S+ FS
Sbjct: 35 QTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLE-GHSSSVQSVAFSP 93
Query: 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG 360
+G + S S D+T ++ S L GHS V F+ +G
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G L+ LE HS+ + ++ FS DG + S S D+T ++ SG L + GHSS V
Sbjct: 31 GPELQTLE-GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSV 89
Query: 355 IFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
F+ +G + + SSD T+K+W+ ++D L+
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWN-SASDSLK 118
Score = 136 (52.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 49/206 (23%), Positives = 86/206 (41%)
Query: 311 SLVFSRDG--SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368
SL + +G ++ S +F ++ G L GHS +V F+ DG + + S+
Sbjct: 116 SLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSA 175
Query: 369 DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS--SIYIMTL 426
+ T+K+WD + T GG + N V +PD ++ + ++ +I +
Sbjct: 176 EKTIKLWDSATCGLKHTL-------GGHS--NWVLPLVFSPDGRLLASGSNDATIKLWDP 226
Query: 427 QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDV 486
+K G + +A SP G+ + D + + +G H +K H V
Sbjct: 227 PSGSLKHTLEGHSNKIESLA--FSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMV 284
Query: 487 IGVTHHPHRNLLATYGEDCTMKLWKP 512
+ V P LL + D T+KLW P
Sbjct: 285 LSVVFSPDSQLLESGSGDNTIKLWDP 310
Score = 47 (21.6 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQ 226
+L HT++ G E FSP+GQ
Sbjct: 116 SLKHTME-GHSDRVESVAFSPNGQ 138
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 230 (86.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 59/183 (32%), Positives = 93/183 (50%)
Query: 201 PTTLS-HTIKFGTKSHAE--CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
PT L+ ++F + H E C+ FSPDG+ L++ S DG + VW SG+L L A
Sbjct: 11 PTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRL---LWRLAG- 66
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
H V FS D ++AS S D I++W + +CL L + H V ++ FS D
Sbjct: 67 ----HRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVL-KGHQRSVETVSFSPD 121
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
Q+ S +D A + ++SG+ + GH + + F+ + T S D TV +WDL
Sbjct: 122 SKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Query: 378 KST 380
+++
Sbjct: 182 RAS 184
Score = 197 (74.4 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 55/185 (29%), Positives = 92/185 (49%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265
H +K G + E FSPD + L S +D VW+ SG+ + L + H ++
Sbjct: 104 HVLK-GHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGR-RVHL-------LVGHCDS 154
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL---RRLERAHSEGVTSLVFSRDGSQIL 322
+ +FS S+ LA+GS D + +W +R+ + LE H+ ++ L +S G +
Sbjct: 155 IQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLE-GHTGNISCLCYSASGL-LA 212
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
S S+D T + + L + +GH+ +VN F+ D ++ +A TVKVWD + C
Sbjct: 213 SGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKC 272
Query: 383 LQTFK 387
L+T K
Sbjct: 273 LETLK 277
Score = 196 (74.1 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 68/251 (27%), Positives = 107/251 (42%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V C FS D L + S DG + VW +SG+ L RL H V S FS DG I
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLA-GHRGPVKSCCFSPDGRLI 83
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
S+S D + R+ + K L +GH V F+ D ++ + D VW+++S
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGR 143
Query: 382 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKRE 440
+ L G S+ S P + D + + S+++I L+ V S+ + +
Sbjct: 144 RVHL------LVGHCDSIQSSDFSPTS-DSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196
Query: 441 GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLA 499
G+ C S G + G D+ + + + L +K H V + P LA
Sbjct: 197 TGNISCLCYSASG--LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLA 254
Query: 500 TYGEDCTMKLW 510
+ G T+K+W
Sbjct: 255 SAGYSRTVKVW 265
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSP L + S+D + +WD L+ + H + C+ +S S +LAS
Sbjct: 160 FSPTSDSLATGSWDSTVHIWD-----LRASTPVVSYHNLEGHTGNISCLCYSA-SGLLAS 213
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
GS D I VW+ + +L + H+ V SL FS D ++ S + T ++ +GK
Sbjct: 214 GSWDKTICVWKPTTNNLPLQL-KGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKC 272
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASS 368
L+ +G + IFT DG +V+ ++
Sbjct: 273 LETLKGMLDVAHACIFTPDGKLLVSGAA 300
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY 350
R+ G+ +R + H E V FS DG +L+ S D + G KSG+LL GH
Sbjct: 13 RLAVGR-VRFYGQHHGE-VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGP 70
Query: 351 VNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 406
V F+ DG + ++SSD ++++WD+ + CL L+G SV +V P
Sbjct: 71 VKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHV------LKGHQRSVETVSFSP 120
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 229 (85.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 54/166 (32%), Positives = 89/166 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD +++ + S G + ++ SGK + L + + +L I +S D + LAS
Sbjct: 114 FSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRG--------KFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH S+V F+ D + V++SSD ++KVWD S C+ TF
Sbjct: 225 AGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF 270
Score = 207 (77.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 65/248 (26%), Positives = 112/248 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S +G S S D I +WD +GK K + + + + FS DS+ +A+G
Sbjct: 73 SQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWT--------VAFSPDSKYIATG 124
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S GK+ ++ + SG+ L+ + + S+ +S DG + S + D I + +GKLL
Sbjct: 125 SHLGKVNIFGVESGKKEHSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 401
GH+ + F+ D +VTAS D +K++D++ + T L G + V S
Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHGSWVLS 237
Query: 402 VHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 460
V P + H V + SI + T V +F + + + +P G I G
Sbjct: 238 VAFSPDDT-HFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQ---VWSVKYNPTGSKIVSAG 293
Query: 461 EDRNLYCF 468
+DR ++ +
Sbjct: 294 DDRAIHIY 301
Score = 192 (72.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 45/156 (28%), Positives = 77/156 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H V S+ FS D + +S+S D + ++ S
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + GS++V+A D + ++D
Sbjct: 267 VNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 51/220 (23%), Positives = 94/220 (42%)
Query: 298 LRRLERAHSEGVTSLVFSR---DGSQILST-SFDSTARIHGLKSGKLLKEF--RGHSSYV 351
L + E AH + + + + R DGS+ + T S D ++ KL ++ GH V
Sbjct: 8 LFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGV 67
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
+ +G+ ++S D +++WDL +T K + G +V P + +
Sbjct: 68 VSVNISQNGAIAASSSLDAHIRLWDL------ETGKQIKSMDAGPVDAWTVAFSPDSK-Y 120
Query: 412 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFSH 470
I + + I ++ K S R G F+ + SP G+++ D + F
Sbjct: 121 IATGSHLGKVNIFGVESGK-KEHSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 471 QSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+GKL H ++ H + +T P LL T +D +K++
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 229 (85.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 56/166 (33%), Positives = 90/166 (54%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD Q L + + G + ++ SGK +Y D + +L I +S D + LAS
Sbjct: 114 FSPDSQHLATGTHMGKVNIFGVESGKK----EYSLDT----RGKFILSIAYSPDGKYLAS 165
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
G+ DG I ++ I +G+ L LE H+ + SL FS D +++ S D +I+ ++ L
Sbjct: 166 GAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH+S+V + F D + V++SSD +VKVWD+ + C+ TF
Sbjct: 225 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTF 270
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 42/156 (26%), Positives = 78/156 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG++L S + DG I ++D +GKL L+ H + + FS DS++L +
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEG--------HAMPIRSLTFSPDSQLLVT 207
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S DG IK++ ++ L H+ V ++ F D + +S+S D + ++ + +
Sbjct: 208 ASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ F H V + +GS++V+ D + V+D
Sbjct: 267 IHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 58/240 (24%), Positives = 109/240 (45%)
Query: 230 SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289
S S D I +WD +GK K + + + + FS DS+ LA+G+ GK+ +
Sbjct: 81 SSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL--------AFSPDSQHLATGTHMGKVNI 132
Query: 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS 349
+ + SG+ L+ + + S+ +S DG + S + D I + +GKLL GH+
Sbjct: 133 FGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
+ F+ D +VTAS D +K++D++ + T L G + V +V P +
Sbjct: 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT------LSGHASWVLNVAFCPDDT 245
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
H V + S+ + + + + +F + + + G I VG+D+ ++ +
Sbjct: 246 -HFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQ---VWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/277 (20%), Positives = 116/277 (41%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+V+ S D ++VW + +L +LQ+ + H V+ ++ S + AS S D I
Sbjct: 35 VVTGSLDDLVKVWKWRDERL--ELQWSLEG----HQLGVVSVDISHTLPIAASSSLDAHI 88
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
++W + +G+ ++ ++ + T L FS D + + + I G++SGK
Sbjct: 89 RLWDLENGKQMKSIDAGPVDAWT-LAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTR 147
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
++ ++ DG + + + D + ++D+ + L T L G + S+ P
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT------LEGHAMPIRSLTFSPD 201
Query: 408 NPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYC 467
+ +V + I I +Q + SG VA C P D+++
Sbjct: 202 S-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--PDDTHFVSSSSDKSVKV 258
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+ + H H+ V GV ++ + + + + G+D
Sbjct: 259 WDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 245 (91.3 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 80/335 (23%), Positives = 145/335 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWD+ +G
Sbjct: 83 GPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ + +G +K F GH +V DG+ + ++S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDA-SVNSVH--LFPKNPDHIVVCNKTSSIYIM 424
+D TV+VW + + +C + + + + S H + K +
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLS 313
Query: 425 TLQGQVVKSF--SSGK----REGGD-FV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
+ + +K + S G G D +V V P G++I +D+ L + +++ +
Sbjct: 314 GSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCT 373
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 374 KTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 190 (71.9 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 59/212 (27%), Positives = 104/212 (49%)
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364
H VT ++F S I+S S D+T ++ ++G + +GH+ V D F + G +
Sbjct: 107 HRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 365 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 424
+ S+D T+K+WD + +C++T + G D +V+SV + P N DHIV ++ +I +
Sbjct: 167 SCSADMTIKLWDFQGFECIRT------MHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMW 219
Query: 425 TLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHE 483
+ G VK+F+ G RE V + G I D+ + + + + + ++ HE
Sbjct: 220 EVATGYCVKTFT-GHREWVRMVRP--NQDGTLIASSSNDQTVRVWVVATKECKAELREHE 276
Query: 484 KDVIGVTHHP---HRNLLATYGEDCTMKLWKP 512
V ++ P H +L G + T K KP
Sbjct: 277 HVVECISWAPESAHPTILEATGSE-TKKSGKP 307
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 57/204 (27%), Positives = 83/204 (40%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + S S D + VW + +
Sbjct: 209 SASRDKTIKMWEVATGYCVKTFT-GHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKE 267
Query: 247 LKKDLQYQAD--ETFMMHDE----TVLCIEFSRDSE------MLASGSQDGKIKVWRIRS 294
K +L+ E E T+L S + L SGS+D IK+W +
Sbjct: 268 CKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSI 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++ G I+S + D T RI K+ + K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 250 (93.1 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 78/333 (23%), Positives = 147/333 (44%)
Query: 189 TAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLK 248
T++ + + + LS + + G + CA F P + + SCS D + VW++ K
Sbjct: 24 TSSKITEQQTTHDPALSRSFR-GHEDIITCADFDPKMRQVASCSKDSIVYVWNF-----K 77
Query: 249 KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 308
Q F+ H V C+++S D E +AS QD +I++W+ + Q + +AH
Sbjct: 78 PQ---QRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQ-NTVQSKCSIIKAHCGA 133
Query: 309 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368
+ S+ FS DG +LS+S D T ++ L+ K + F GH ++V + + D V + S
Sbjct: 134 IRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSD 193
Query: 369 DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHI--VVCNKTSSIYIMTL 426
D TV +WDL + + + ++ ++ + + D + V+ + + I +
Sbjct: 194 DKTVMLWDLNFQKIVSKYST----LDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSS 249
Query: 427 QGQVVK--SFSSGKR----EGGDFVAACVS--PKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
+K S K D +S P G ++ G D + + + G+ +
Sbjct: 250 FDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYT 309
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ ++KD+ V + + AT G +WK
Sbjct: 310 LYSNDKDITTVQFNQSGDYFATGGSQNLCMVWK 342
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 247 (92.0 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 77/314 (24%), Positives = 140/314 (44%)
Query: 199 MYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADET 258
M TL K G K CA F+P+ + L + S D + +W+ L+ K + ++
Sbjct: 5 MEDPTLERHFK-GHKDVISCADFNPNNKQLATGSCDKSLMIWN-LAPKARA---FR---- 55
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRLERAHSEGVTSLVFSRD 317
F+ H + + + F+ ++AS S+D +++W G+ + +AH+ V S+ FSRD
Sbjct: 56 FVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGEST--VFKAHTASVRSVHFSRD 113
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
G ++++ S D + ++ G++ K L H+++V A F+ DG + + D TV++WD
Sbjct: 114 GQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDT 173
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSG 437
S C+ F GG A+ F + I ++I I ++ K
Sbjct: 174 SSHQCINIFTD----YGGSATFVD---FNSSGTCIASSGADNTIKIWDIRTN--KLIQHY 224
Query: 438 KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNL 497
K P G ++ D + G+L + + H+ V+ VT +L
Sbjct: 225 KVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDL 284
Query: 498 LATYGEDCTMKLWK 511
A+ G D + +WK
Sbjct: 285 FASGGADSQVLMWK 298
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 234 (87.4 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 76/302 (25%), Positives = 130/302 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C FS + + L S S D + +W +K Q +A F H + V C+
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWH-----MKP--QSRAYR-FTGHKDAVTCVN 68
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS +LASGS+D +++W + + + + RAH+ V S+ F DG +++ S D T
Sbjct: 69 FSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ + L H ++V A F+ DG +V+AS D TVK+WD S +C+ ++
Sbjct: 128 KVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-- 185
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACV 449
GG V V P I +++ + T ++V+ + + A
Sbjct: 186 --HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVWDTRTHRLVQHY---QLHSAAVNALSF 237
Query: 450 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509
P G ++ D L G+L + + H+ V A+ G D + +
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 510 WK 511
WK
Sbjct: 298 WK 299
Score = 231 (86.4 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 79/258 (30%), Positives = 119/258 (46%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + V C++FS +++ LASGS D + +W ++ R H + VT + FS G
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT-GHKDAVTCVNFSPSG 73
Query: 319 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ S S D T RI +K + FR H++ V F +DG +VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQLLVTASDDKTVKVW- 130
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 432
ST Q F L +N V +PD ++V +KT ++ T + + V
Sbjct: 131 --STH-RQRF-----LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR-ECVH 181
Query: 433 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491
S+ E G FV P G I G D + + ++ +L ++H V ++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSF 237
Query: 492 HPHRNLLATYGEDCTMKL 509
HP N L T D T+K+
Sbjct: 238 HPSGNYLITASSDSTLKI 255
Score = 152 (58.6 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 56/214 (26%), Positives = 88/214 (41%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H + VT + FS + + S S DST I +K F GH V F+
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G + + S D TV++W + + T R A+V SVH F + +V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTV-----FRAHTATVRSVH-FCSDGQLLVTASD 123
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
++ + + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWSTHRQ---RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H H V V HP +A G D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 249 (92.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 62/184 (33%), Positives = 93/184 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S E R + + +V+ S G I VWD + K+ + T M H + ++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR--------TLMGHKANICSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + + P
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 391 -PLR 393
P+R
Sbjct: 232 GPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D+ + T+ G K++ F P G+F+ S S D I++WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR- 142
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ---YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEFH 198
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
+ + S S D T R L+ +++ G V +F DG + + D +++V+
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Query: 376 DLKSTDC 382
+ C
Sbjct: 258 GWEPERC 264
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 249 (92.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 62/184 (33%), Positives = 93/184 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S E R + + +V+ S G I VWD + K+ + T M H + ++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR--------TLMGHKANICSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + + P
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 391 -PLR 393
P+R
Sbjct: 232 GPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D+ + T+ G K++ F P G+F+ S S D I++WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR- 142
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ---YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEFH 198
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
+ + S S D T R L+ +++ G V +F DG + + D +++V+
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Query: 376 DLKSTDC 382
+ C
Sbjct: 258 GWEPERC 264
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 249 (92.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 62/184 (33%), Positives = 93/184 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S E R + + +V+ S G I VWD + K+ + T M H + ++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR--------TLMGHKANICSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + + P
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 391 -PLR 393
P+R
Sbjct: 232 GPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D+ + T+ G K++ F P G+F+ S S D I++WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR- 142
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ---YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEFH 198
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
+ + S S D T R L+ +++ G V +F DG + + D +++V+
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Query: 376 DLKSTDC 382
+ C
Sbjct: 258 GWEPERC 264
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 249 (92.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 62/184 (33%), Positives = 93/184 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S E R + + +V+ S G I VWD + K+ + T M H + ++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR--------TLMGHKANICSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + + P
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 391 -PLR 393
P+R
Sbjct: 232 GPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D+ + T+ G K++ F P G+F+ S S D I++WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR- 142
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ---YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEFH 198
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
+ + S S D T R L+ +++ G V +F DG + + D +++V+
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Query: 376 DLKSTDC 382
+ C
Sbjct: 258 GWEPERC 264
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 249 (92.7 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 62/184 (33%), Positives = 93/184 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S E R + + +V+ S G I VWD + K+ + T M H + ++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR--------TLMGHKANICSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ L +GK++ EF GH+ VN F + + + SSD T++ WDL+ + + P
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Query: 391 -PLR 393
P+R
Sbjct: 232 GPVR 235
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H V V HP+ LLA+ D T++ W
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 148 (57.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D+ + T+ G K++ F P G+F+ S S D I++WD +K ++
Sbjct: 89 VWDLEAAKILRTL-MGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR- 142
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ H + V C+ FS D + LAS + D +K+W + +G+ + H+ V + F
Sbjct: 143 ---YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP-GHTGPVNVVEFH 198
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
+ + S S D T R L+ +++ G V +F DG + + D +++V+
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVY 257
Query: 376 DLKSTDC 382
+ C
Sbjct: 258 GWEPERC 264
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 238 (88.8 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 18 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 77
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 78 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 128
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 129 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 188
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 189 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 246
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 247 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 306
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 307 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 144 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 202
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 203 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 262
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 263 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 321
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 322 DFHKTAPYVVTGSVDQTVKVWECR 345
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 243 (90.6 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 91/320 (28%), Positives = 148/320 (46%)
Query: 204 LSHTIKFGTKSHAEC-ARFSPDGQFLVS-CSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261
L HT++ + C RFS DG+FL + C+ V++ +GKL LQ ++ +
Sbjct: 292 LLHTLEH---TSVICYVRFSADGKFLATGCNRAAM--VFNVETGKLITLLQEESSKR--E 344
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
D V + FS D + LA+G +D +I++W I + R L H + + SL FS+DG +
Sbjct: 345 GDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLT-GHEQEIYSLDFSKDGKTL 403
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
+S S D T + +++G+ K V +F+ DG + S D +++W T
Sbjct: 404 VSGSGDRTVCLWDVEAGEQ-KLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTL 462
Query: 382 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREG 441
Q L G + SV SV P ++V + ++I + LQ V S +EG
Sbjct: 463 VEQ-------LHGHEESVYSVAFSPDGK-YLVSGSLDNTIKLWELQC-VSNVAPSMYKEG 513
Query: 442 G----------DFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT 490
G DF+ + VSP G+WI +DR + +S S + ++ H VI V
Sbjct: 514 GICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVA 573
Query: 491 HHPHRNLLATYGEDCTMKLW 510
P+ + AT D ++W
Sbjct: 574 VSPNGHCFATGSGDLRARIW 593
Score = 165 (63.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 69/291 (23%), Positives = 120/291 (41%)
Query: 240 WDYLSGKLKKDLQYQADETFMMHDETVLC-IEFSRDSEMLASGSQDGKIKVWRIRSGQCL 298
W S K+ + +V+C + FS D + LA+G + V+ + +G+ +
Sbjct: 275 WTVTSNVPNKEPPISVQLLHTLEHTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLI 333
Query: 299 RRLERAHS--EG---VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 353
L+ S EG V S+ FS DG + + D RI + ++ + GH +
Sbjct: 334 TLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYS 393
Query: 354 AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 413
F+ DG +V+ S D TV +WD+++ + Q + D V +V +F + I
Sbjct: 394 LDFSKDGKTLVSGSGDRTVCLWDVEAGE--QKL-----ILHTDDGVTTV-MFSPDGQFIA 445
Query: 414 VCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN-----LYCF 468
+ I I T G +V+ G E VA SP G+++ D L C
Sbjct: 446 AGSLDKVIRIWTSSGTLVEQLH-GHEESVYSVA--FSPDGKYLVSGSLDNTIKLWELQCV 502
Query: 469 SH-------QSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512
S+ + G + H+ ++ VT P + + +D T++ W P
Sbjct: 503 SNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSP 553
Score = 48 (22.0 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 12/47 (25%), Positives = 28/47 (59%)
Query: 58 AILPQ-VAQLKLPRNKLEDLYEQIVLEM---IELRELDTARAILRQT 100
A++ Q V L++ ++K++D YE+ + + +E R + A ++ Q+
Sbjct: 80 ALMKQTVMDLEMQQSKVKDRYEEEITSLKAQLEARRKEIASGVVPQS 126
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 244 (91.0 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 84/302 (27%), Positives = 132/302 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G K +FSP G L S S D + +W + K K +++A H V ++
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLW--IPDKRGKFSEFKA------HTAPVRSVD 109
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS D + LA+ S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
+I + + + F + N F G+ + +A SD TVKVWD++ LQ ++
Sbjct: 169 KIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS 228
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKREG 441
GG VN + P + +++V + ++ I+ TLQG F+ +G
Sbjct: 229 ---GG---VNCISFHPSD-NYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKG 281
Query: 442 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNLL 498
G+ A+ + ++ D L+C L+ L H D+ T HPH +
Sbjct: 282 GELFASGGADTQVLLWRTNFDE-LHCKGLNKRNLKRLHFDSPPHLLDIYPRTPHPHEEKV 340
Query: 499 AT 500
T
Sbjct: 341 ET 342
Score = 227 (85.0 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 71/302 (23%), Positives = 128/302 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ-YQADETFMMHDETVLCI 269
G K+ SP+G+ L + S+D F+ +W++ K + Y+ ++ H + V +
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNF-----KPHARAYR----YVGHKDVVTSV 66
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+FS +LAS S+D +++W I + +AH+ V S+ FS DG + + S D +
Sbjct: 67 QFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
++ + + L H+ +V A F+ DG +V+ S D T+K+WD + C+ F
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD- 184
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV 449
SV + NP + + S + +V K + G
Sbjct: 185 --------SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 236
Query: 450 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509
P ++ D L G+L + ++ H V V+ L A+ G D + L
Sbjct: 237 HPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 296
Query: 510 WK 511
W+
Sbjct: 297 WR 298
Score = 201 (75.8 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 74/255 (29%), Positives = 113/255 (44%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + ++ S + + LA+ S D + +W + R H + VTS+ FS G
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHG 72
Query: 319 SQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ + S S D T R+ K GK EF+ H++ V F+ DG + TAS D ++KVW +
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKSF 434
Q F L + V +PD IV C++ +I I T Q V +F
Sbjct: 132 YR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S +FV +P G I G D+ + + + KL +VH V ++ HP
Sbjct: 183 SDSVGFA-NFVD--FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Query: 495 RNLLATYGEDCTMKL 509
N L T D T+K+
Sbjct: 240 DNYLVTASSDGTLKI 254
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 52/217 (23%), Positives = 88/217 (40%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H +TSL S +G Q+ + S+D+ + K + GH V F+
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G+ + +AS D TV++W FK A V SV F + + ++
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFK------AHTAPVRSVD-FSADGQFLATASE 122
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
SI + ++ Q + S R A SP G I ED+ + + + + +
Sbjct: 123 DKSIKVWSMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 478 LMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 510
+ D +G V +P +A+ G D T+K+W
Sbjct: 181 ----NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 241 (89.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 83/302 (27%), Positives = 131/302 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G K +FSP G L S S D + +W + K K +++A H V ++
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLW--IPDKRGKFSEFKA------HTAPVRSVD 67
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS D + LA+ S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 68 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 126
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
+I + + + F + N F G+ + +A SD TVKVWD++ LQ ++
Sbjct: 127 KIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS 186
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKREG 441
GG VN + P ++++ + ++ I+ TLQG F+ +G
Sbjct: 187 ---GG---VNCISFHPSG-NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKG 239
Query: 442 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNLL 498
G+ A+ + ++ D L+C L+ L H D+ T HPH +
Sbjct: 240 GELFASGGADTQVLLWRTNFDE-LHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHEEKV 298
Query: 499 AT 500
T
Sbjct: 299 ET 300
Score = 216 (81.1 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 60/174 (34%), Positives = 88/174 (50%)
Query: 209 KFGT-KSHAECAR---FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264
KF K+H R FS DGQFL + S D I+VW + L Y+ H
Sbjct: 52 KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSL-YR-------HTH 103
Query: 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGSQILS 323
V C +FS D ++ S S+D IK+W + QC+ + S G + V F+ G+ I S
Sbjct: 104 WVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF--SDSVGFANFVDFNPSGTCIAS 161
Query: 324 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
D T ++ ++ KLL+ ++ HS VN F G+ ++TASSD T+K+ DL
Sbjct: 162 AGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 215
Score = 210 (79.0 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 60/253 (23%), Positives = 106/253 (41%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
++ H + V ++FS +LAS S+D +++W I + +AH+ V S+ FS DG
Sbjct: 14 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADG 72
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
+ + S D + ++ + + L H+ +V A F+ DG +V+ S D T+K+WD
Sbjct: 73 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 132
Query: 379 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 438
+ C+ F SV + NP + + S + +V K +
Sbjct: 133 NKQCVNNFSD---------SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 183
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 498
G P G ++ D L G+L + ++ H V V+ L
Sbjct: 184 VHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 243
Query: 499 ATYGEDCTMKLWK 511
A+ G D + LW+
Sbjct: 244 ASGGADTQVLLWR 256
Score = 209 (78.6 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 58/228 (25%), Positives = 105/228 (46%)
Query: 186 FRGTAAMKQDVE--DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYL 243
F TA+ + ++ MY +++ T CA+FSPDG+ +VSCS D I++WD
Sbjct: 74 FLATASEDKSIKVWSMYRQRFLYSLYRHTH-WVRCAKFSPDGRLIVSCSEDKTIKIWDTT 132
Query: 244 SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER 303
+ K+ + +D + ++F+ +AS D +KVW +R + L+ +
Sbjct: 133 N---KQCVNNFSDSVGFAN-----FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ- 183
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRV 363
HS GV + F G+ +++ S D T +I L G+L+ +GH+ V F+ G
Sbjct: 184 VHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 243
Query: 364 VTASSDCTVKVW--DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
+ +D V +W + C K D+ + + ++P+ P
Sbjct: 244 ASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTP 291
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 242 (90.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 84/301 (27%), Positives = 131/301 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G K +FSP G L S S D I +W + K K +++A H V ++
Sbjct: 58 GHKDVITSVQFSPLGNLLASASRDRTIRLW--IPDKRGKSSEFKA------HTAPVRSVD 109
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS D + LAS S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 110 FSADGQFLASASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
+I + + + F + N F +G+ + +A SD TVK+WD++ LQ ++
Sbjct: 169 KIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHS 228
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKREG 441
GG VN V P ++++ + ++ I+ TLQG F+ +G
Sbjct: 229 ---GG---VNCVSFHPSG-NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKG 281
Query: 442 GDFVAACVSPKGEWIYCVGEDR-NLYCFSHQSGKLEHL-MKVHEKDVIGVTHHPHRNLLA 499
G+ + + ++ D N S ++ K H H D+ T HPH +
Sbjct: 282 GELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRLHFDSPPHLLDIYPRTPHPHEGRID 341
Query: 500 T 500
T
Sbjct: 342 T 342
Score = 230 (86.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 73/302 (24%), Positives = 127/302 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE-TFMMHDETVLCI 269
G K+ FSP+G+ L + S+D F+ +W L+ QA ++ H + + +
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWS---------LRPQARAFRYVGHKDVITSV 66
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+FS +LAS S+D I++W I + +AH+ V S+ FS DG + S S D +
Sbjct: 67 QFSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKS 125
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
++ + + L H+ +V A F+ DG +V+ S D T+K+WD + C+ F
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD- 184
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV 449
V + NP+ + + S + +V K + G
Sbjct: 185 --------FVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236
Query: 450 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509
P G ++ D L G+L + ++ H V V+ L + G D + L
Sbjct: 237 HPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLL 296
Query: 510 WK 511
W+
Sbjct: 297 WR 298
Score = 212 (79.7 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 77/256 (30%), Positives = 119/256 (46%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRLERAHSEGVTSLVFSRD 317
F H + ++FS + + LA+GS D + +W +R + R + H + +TS+ FS
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV--GHKDVITSVQFSPL 71
Query: 318 GSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
G+ + S S D T R+ K GK EF+ H++ V F+ DG + +AS D ++KVW+
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKS-SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWN 130
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKS 433
+ Q F L + V +PD IV C++ +I I T Q V +
Sbjct: 131 MYR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 434 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP 493
FS +FVA +P G I G D + + + KL +VH V V+ HP
Sbjct: 182 FSDFVGFA-NFVA--FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP 238
Query: 494 HRNLLATYGEDCTMKL 509
N L T D T+K+
Sbjct: 239 SGNYLITASSDGTLKI 254
Score = 126 (49.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 51/218 (23%), Positives = 90/218 (41%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H +TS+ FS +G Q+ + S+D+ + L+ + GH + F+
Sbjct: 10 LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKP-PPPLRGGDASVNSVHLFPKNPDHIVVCN 416
G+ + +AS D T+++W FK P+R D S + L + D
Sbjct: 70 PLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASED------ 123
Query: 417 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
SI + + Q + S R A SP G I ED+ + + + +
Sbjct: 124 --KSIKVWNMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV 179
Query: 477 HLMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 510
+ + D +G V +P+ +A+ G D T+K+W
Sbjct: 180 N----NFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 239 (89.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 62/254 (24%), Positives = 118/254 (46%)
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
TF H ++C+ F+ S ++A+GS D K+W I++G+ + L R HS + SL F+
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTL-RGHSAEIISLSFNTS 230
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
G +I++ SFD T + +G+ + GH + ++ A F D S ++T S D T K+WD
Sbjct: 231 GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDA 290
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSG 437
+ C+ T L G D + F I + + I + + K +
Sbjct: 291 TNGKCVAT------LTGHDDEILD-SCFDYTGKLIATASADGTARIFSAATR--KCIAKL 341
Query: 438 KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNL 497
+ G+ +P+G + D+ + Q+G+ +++ H ++ + N+
Sbjct: 342 EGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNI 401
Query: 498 LATYGEDCTMKLWK 511
+ T +D T ++W+
Sbjct: 402 VITGSKDNTCRIWR 415
Score = 223 (83.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 52/164 (31%), Positives = 87/164 (53%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
+P G + + SFD ++W +GK Y TF H ++C+ F+ S ++A+G
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKC-----YH---TFRGHTAEIVCLSFNPQSTLVATG 195
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D K+W I++G+ + L R HS + SL F+ G +I++ SFD T + +G+ +
Sbjct: 196 SMDTTAKLWDIQNGEEVYTL-RGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV 254
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
GH + ++ A F D S ++T S D T K+WD + C+ T
Sbjct: 255 NILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVAT 298
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 65/252 (25%), Positives = 115/252 (45%)
Query: 262 HDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
H V I F+ + +A+GS D K+W + +G+C R H+ + L F+ +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTF-RGHTAEIVCLSFNPQSTL 191
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
+ + S D+TA++ +++G+ + RGHS+ + F G R++T S D TV VWD
Sbjct: 192 VATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA--- 248
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV--CNKTSSIYIMTLQGQVVKSFSSGK 438
T + L G A ++S F + I+ +KT ++ T G+ V + +
Sbjct: 249 ---DTGRKVNILIGHCAEISSAS-FNWDCSLILTGSMDKTCKLWDAT-NGKCVATLTGHD 303
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 498
E + +C G+ I D FS + K ++ HE ++ ++ +P N L
Sbjct: 304 DE---ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHL 360
Query: 499 ATYGEDCTMKLW 510
T D T ++W
Sbjct: 361 LTGSSDKTARIW 372
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 46/167 (27%), Positives = 81/167 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
F+ G +++ SFD + VWD +G+ K ++ + H + F+ D ++ +
Sbjct: 227 FNTSGDRIITGSFDHTVVVWDADTGR-KVNI-------LIGHCAEISSASFNWDCSLILT 278
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
GS D K+W +G+C+ L H + + F G I + S D TARI + K
Sbjct: 279 GSMDKTCKLWDATNGKCVATLT-GHDDEILDSCFDYTGKLIATASADGTARIFSAATRKC 337
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
+ + GH ++ F G+ ++T SSD T ++WD ++ CLQ +
Sbjct: 338 IAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLE 384
Score = 194 (73.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD-SEMLASGSQ 283
G ++ S+D ++WD SG+ +L T H V I F+ + +A+GS
Sbjct: 104 GSCFITGSYDRTCKLWDTASGE---ELN-----TLEGHRNVVYAIAFNNPYGDKIATGSF 155
Query: 284 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE 343
D K+W + +G+C R H+ + L F+ + + + S D+TA++ +++G+ +
Sbjct: 156 DKTCKLWSVETGKCYHTF-RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYT 214
Query: 344 FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
RGHS+ + F G R++T S D TV VWD
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD 247
Score = 189 (71.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 45/168 (26%), Positives = 83/168 (49%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
I G + A F+ D +++ S D ++WD +GK T HD+ +L
Sbjct: 256 ILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVA--------TLTGHDDEIL 307
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
F +++A+ S DG +++ + +C+ +LE H ++ + F+ G+ +L+ S D
Sbjct: 308 DSCFDYTGKLIATASADGTARIFSAATRKCIAKLE-GHEGEISKISFNPQGNHLLTGSSD 366
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
TARI ++G+ L+ GH+ + F G+ V+T S D T ++W
Sbjct: 367 KTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 68/279 (24%), Positives = 123/279 (44%)
Query: 246 KLKKDLQYQADETFMM------HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
+L++ L ++ TF + H + + ++ +GS D K+W SG+ L
Sbjct: 69 RLQEKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELN 128
Query: 300 RLERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 358
LE H V ++ F+ G +I + SFD T ++ +++GK FRGH++ + F
Sbjct: 129 TLE-GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNP 187
Query: 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 418
+ V T S D T K+WD+++ + + T LRG A + S+ F + D I+ T
Sbjct: 188 QSTLVATGSMDTTAKLWDIQNGEEVYT------LRGHSAEIISLS-FNTSGDRII----T 236
Query: 419 SSIYIMTLQGQVVKSFSSGKREGGDFVAACV---SPKGEW---IYCVGE-DRNLYCFSHQ 471
S + T+ VV +G R+ + C S W + G D+ +
Sbjct: 237 GS-FDHTV---VVWDADTG-RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 472 SGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+GK + H+ +++ L+AT D T +++
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 241 (89.9 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 83/302 (27%), Positives = 131/302 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G K +FSP G L S S D + +W + K K +++A H V ++
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLW--IPDKRGKFSEFKA------HTAPVRSVD 109
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS D + LA+ S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
+I + + + F + N F G+ + +A SD TVKVWD++ LQ ++
Sbjct: 169 KIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS 228
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKREG 441
GG VN + P ++++ + ++ I+ TLQG F+ +G
Sbjct: 229 ---GG---VNCISFHPSG-NYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKG 281
Query: 442 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNLL 498
G+ A+ + ++ D L+C L+ L H D+ T HPH +
Sbjct: 282 GELFASGGADTQVLLWRTNFDE-LHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHEEKV 340
Query: 499 AT 500
T
Sbjct: 341 ET 342
Score = 234 (87.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 72/302 (23%), Positives = 129/302 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ-YQADETFMMHDETVLCI 269
G K+ SP+G+ L + S+D F+ +W++ K + Y+ ++ H + V +
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNF-----KPHARAYR----YVGHKDVVTSV 66
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+FS +LAS S+D +++W I + +AH+ V S+ FS DG + + S D +
Sbjct: 67 QFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
++ + + L H+ +V A F+ DG +V+ S D T+K+WD + C+ F
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD- 184
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV 449
SV + NP + + S + +V K + G
Sbjct: 185 --------SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 236
Query: 450 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509
P G ++ D L G+L + ++ H V V+ L A+ G D + L
Sbjct: 237 HPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 296
Query: 510 WK 511
W+
Sbjct: 297 WR 298
Score = 200 (75.5 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 74/255 (29%), Positives = 113/255 (44%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + ++ S + + LA+ S D + +W + R H + VTS+ FS G
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHG 72
Query: 319 SQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ + S S D T R+ K GK EF+ H++ V F+ DG + TAS D ++KVW +
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKSF 434
Q F L + V +PD IV C++ +I I T Q V +F
Sbjct: 132 YR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S +FV +P G I G D+ + + + KL +VH V ++ HP
Sbjct: 183 SDSVGFA-NFVD--FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Query: 495 RNLLATYGEDCTMKL 509
N L T D T+K+
Sbjct: 240 GNYLITASSDGTLKI 254
Score = 129 (50.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 52/217 (23%), Positives = 88/217 (40%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H +TSL S +G Q+ + S+D+ + K + GH V F+
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G+ + +AS D TV++W FK A V SV F + + ++
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFK------AHTAPVRSVD-FSADGQFLATASE 122
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
SI + ++ Q + S R A SP G I ED+ + + + + +
Sbjct: 123 DKSIKVWSMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 478 LMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 510
+ D +G V +P +A+ G D T+K+W
Sbjct: 181 ----NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 244 (91.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 66/200 (33%), Positives = 103/200 (51%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S C +F+ + +V+ S G + +WD + K+ + T M H ++ ++
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILR--------TLMGHKASISSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E LASGS D IK+W +R C+ R + H++ V L FS DG + S S DST
Sbjct: 113 FHPMGEYLASGSVDSNIKLWDVRRKGCVFRY-KGHTQAVRCLAFSPDGKWLASASDDSTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ L +GK++ EF H+S VN F + + + S+D TVK+WDL+ + + + +
Sbjct: 172 KLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSE--- 228
Query: 391 PLRGGDASVNSVHLFPKNPD 410
G V SV LF NPD
Sbjct: 229 ---GETGVVRSV-LF--NPD 242
Score = 179 (68.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 55/208 (26%), Positives = 95/208 (45%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AHS V+SLV + ++L+T D I + + GH+S V F + R
Sbjct: 18 AHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEER 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
VV S ++++WDL++ L+T L G AS++S+ P +++ + S+I
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRT------LMGHKASISSLDFHPMG-EYLASGSVDSNIK 130
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 482
+ ++ + G + +A SP G+W+ +D + + +GK+ H
Sbjct: 131 LWDVRRKGCVFRYKGHTQAVRCLA--FSPDGKWLASASDDSTVKLWDLIAGKMITEFTSH 188
Query: 483 EKDVIGVTHHPHRNLLATYGEDCTMKLW 510
V V HP+ LLA+ D T+KLW
Sbjct: 189 TSAVNVVQFHPNEYLLASGSADRTVKLW 216
Score = 174 (66.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 47/185 (25%), Positives = 87/185 (47%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
D+ + T+ G K+ F P G++L S S D I++WD +K ++
Sbjct: 91 DLEAAKILRTL-MGHKASISSLDFHPMGEYLASGSVDSNIKLWDVR----RKGCVFR--- 142
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
+ H + V C+ FS D + LAS S D +K+W + +G+ + +H+ V + F +
Sbjct: 143 -YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFT-SHTSAVNVVQFHPN 200
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ S S D T ++ L+ ++ G + V +F DGS + + S + T++V+
Sbjct: 201 EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYGW 259
Query: 378 KSTDC 382
+ C
Sbjct: 260 EPDRC 264
Score = 158 (60.7 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 29/132 (21%), Positives = 65/132 (49%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + S +LA+G +D ++ +W + C+ L H+ V + F+
Sbjct: 14 QEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT-GHTSAVGCIQFN 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
++++ S + R+ L++ K+L+ GH + ++ F G + + S D +K+W
Sbjct: 73 SSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ +K
Sbjct: 133 DVRRKGCVFRYK 144
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 237 (88.5 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 79/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W + +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 235 (87.8 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 63/228 (27%), Positives = 114/228 (50%)
Query: 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
FG + C SP+ +++ + S DG I++W L+ +L+ T H + +
Sbjct: 51 FGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLEC--------TLFGHYRGISQV 102
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+++ S+ LAS S D I++W +C R + H+ V+S+ F+ G+ ++S S+D T
Sbjct: 103 KWATGSKYLASASDDKTIRIWDFEK-RCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDET 161
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
RI L+ G L+ HS + + DG+ TAS D ++WD+ S CL+T P
Sbjct: 162 VRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEP 221
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSS 436
+ ++++ F +N +++V N S I + + +VV+ F S
Sbjct: 222 I-----NVPLSNLQ-FTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDS 263
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 36/127 (28%), Positives = 67/127 (52%)
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H+++V C+ S + +A+ S DG IK+W + + L H G++ + ++
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFR-LECTLFGHYRGISQVKWATG 107
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ S S D T RI + ++ +GH++YV+ F G+ +V+ S D TV++W+L
Sbjct: 108 SKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Query: 378 KSTDCLQ 384
+ CL+
Sbjct: 168 QDGTCLR 174
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/137 (24%), Positives = 67/137 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G ++ F+P G LVS S+D + +W+ G + L H E ++ +
Sbjct: 136 GHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLP--------AHSEPIISVS 187
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
S D + A+ S DG ++W + SGQCL+ L + +++L F+ + +L ++ +S
Sbjct: 188 ISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQI 247
Query: 331 RIHGLKSGKLLKEFRGH 347
R+ + ++++ F H
Sbjct: 248 RLWDYRRNRVVRIFDSH 264
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 240 (89.5 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 84/304 (27%), Positives = 138/304 (45%)
Query: 218 CARFSPDGQFLVS-CSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 276
C FS DG++L + C+ +++D +GK + DE+ D + + FS D
Sbjct: 286 CVNFSNDGKYLATGCNRSA--QIYDVDTGK---KVHAFVDESEKDGDLYIRSVCFSPDGN 340
Query: 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336
LA+G++D +KVW I + + ++ H + SL +S DG I+S S D A+I ++
Sbjct: 341 YLATGAEDKTVKVWDIHTKK-IQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIE 399
Query: 337 SGK----LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL 392
GK L E G + V + DG V S D V++WD ++ L+ ++
Sbjct: 400 KGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYE----- 454
Query: 393 RGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG-DFV-AACVS 450
G SV SV P + + S+ + L G +S G DFV + S
Sbjct: 455 -GHLDSVYSVAFSPDGKS-LASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN---LLATYGEDCTM 507
P G W+ +DR++ + ++G +++ H+ VI V P N + AT D
Sbjct: 513 PDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRS 572
Query: 508 KLWK 511
+LWK
Sbjct: 573 RLWK 576
Score = 179 (68.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 188 GTAAMKQDVEDMYPTTLSHTI---KFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLS 244
G+ K + D+ + T+ + G K+ SPDG+ + + S D + +WD +
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT 446
Query: 245 GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI---RSGQCLRRL 301
G + +Y+ H ++V + FS D + LASGS D +K+W + RS R
Sbjct: 447 GYFLE--RYEG------HLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRAT 498
Query: 302 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH-SSYVNDAIFTNDG 360
H + V S+ FS DGS ++S S D + + ++G +GH +S ++ A+ +
Sbjct: 499 FNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNN 558
Query: 361 SRVV--TASSDCTVKVWDLKS 379
S V T S D ++W S
Sbjct: 559 SHGVFATGSGDFRSRLWKYDS 579
Score = 176 (67.0 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 58/263 (22%), Positives = 116/263 (44%)
Query: 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR-LERAHSEG---VTSLVFS 315
+ H+ V C+ FS D + LA+G + +++ + +G+ + ++ + +G + S+ FS
Sbjct: 278 LQHNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFS 336
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
DG+ + + + D T ++ + + K+ F GH + +++DG +V+ S D K+W
Sbjct: 337 PDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIW 396
Query: 376 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFS 435
D++ C T G V SV + P +V +I + Q +
Sbjct: 397 DIEKGKCAFTLGNEEV--GPKNGVTSVAMSPDG--RLVAAGSLDNI-VRLWDAQT--GYF 449
Query: 436 SGKREGG-DFV-AACVSPKGEWIYCVGEDRNLYCF----SHQSGKLEHLMKVHEKDVIGV 489
+ EG D V + SP G+ + D++L + S + H+ V+ V
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV 509
Query: 490 THHPHRNLLATYGEDCTMKLWKP 512
P + L + +D +++ W P
Sbjct: 510 AFSPDGSWLISGSKDRSVQFWDP 532
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 238 (88.8 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 83/302 (27%), Positives = 131/302 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G K +FSP G L S S D + +W + K K +++A H V ++
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRLW--IPDKRGKSSEFKA------HTAPVRSVD 109
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS D + LA+ S+D IKVW + + L L R H+ V FS DG I+S S D T
Sbjct: 110 FSADGQFLATASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
+I + + + F + N F +G+ + +A SD TVK+WD++ LQ ++
Sbjct: 169 KIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHS 228
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM---------TLQGQVVKSFSSGKREG 441
GG VN V P ++I+ + ++ I+ TLQG F+ +G
Sbjct: 229 ---GG---VNCVSFHPSG-NYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKG 281
Query: 442 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNLL 498
G+ ++ + ++ D L C L+ L H D+ T HPH +
Sbjct: 282 GELFSSGGADTQVLLWRTNFDY-LNCKDMIKRNLKRLHFDSSPHLVDIYPRTPHPHEGKI 340
Query: 499 AT 500
T
Sbjct: 341 ET 342
Score = 236 (88.1 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 74/301 (24%), Positives = 129/301 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G K+ FSP G+ L + S+D F+ +W+ K Q +A ++ H + V ++
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWN-----CKP--QARAFR-YVGHKDVVTSVQ 67
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS +LAS S+D +++W I + +AH+ V S+ FS DG + + S D +
Sbjct: 68 FSPLGNLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSI 126
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ + + L H+ +V A F+ DG +V+ S D T+K+WD + C+ F
Sbjct: 127 KVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD-- 184
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
SV + NP+ + + S + +V K + G
Sbjct: 185 -------SVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
P G +I D L G+L + ++ H V V+ L ++ G D + LW
Sbjct: 238 PSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Query: 511 K 511
+
Sbjct: 298 R 298
Score = 201 (75.8 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 75/256 (29%), Positives = 115/256 (44%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRLERAHSEGVTSLVFSRD 317
F H + ++FS + LA+ S D + +W + + R + H + VTS+ FS
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV--GHKDVVTSVQFSPL 71
Query: 318 GSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
G+ + S S D T R+ K GK EF+ H++ V F+ DG + TAS D ++KVW+
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKS 433
+ Q F L + V +PD IV C++ +I I T Q V +
Sbjct: 131 MYR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 434 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP 493
FS +FV +P G I G D + + + KL +VH V V+ HP
Sbjct: 182 FSDSVGFA-NFVD--FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP 238
Query: 494 HRNLLATYGEDCTMKL 509
N + T D T+K+
Sbjct: 239 SGNYIITASSDGTLKI 254
Score = 126 (49.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 52/217 (23%), Positives = 88/217 (40%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H +TS+ FS G Q+ + S+D+ + K + GH V F+
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G+ + +AS D TV++W FK A V SV F + + ++
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSEFK------AHTAPVRSVD-FSADGQFLATASE 122
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
SI + + Q + S R A SP G I ED+ + + + + +
Sbjct: 123 DKSIKVWNMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 478 LMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 510
+ D +G V +P+ +A+ G D T+K+W
Sbjct: 181 ----NFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 235 (87.8 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 78/337 (23%), Positives = 146/337 (43%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S + D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLR-----GGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+D TV+VW + + +C + + ++S +S+ K
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS--EATGSETKKSGKPGPFL 311
Query: 423 IMTLQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFSHQSGK 474
+ + + +K + S+G G D +V + G ++I +D+ L + +++ +
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE V + H + T D T+K+W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 186 (70.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 58/205 (28%), Positives = 91/205 (44%)
Query: 189 TAAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSG 245
+AA + ++ M+ + +K T H E R + DG + SCS D + VW +
Sbjct: 209 SAARDKTIK-MWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 246 KLKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIR 293
+ K +L ++ + + + I + SE L SGS+D IK+W +
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 294 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 353
+G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 327 TGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
Query: 354 AIFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 226 (84.6 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 71/292 (24%), Positives = 130/292 (44%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FS + + L S S D +++W +K ++ + H + V+C++FS ++AS
Sbjct: 28 FSLNKKQLASGSMDSCLKIWS-----MKPQMRAYC---LVGHKDAVMCVQFSPSGHLVAS 79
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
GS+D + +W + S + + +AH+ V S+ FS DG +++ S D T ++ + K
Sbjct: 80 GSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKF 138
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
L H ++V A F+ DG + +AS D TVK+WD S +C+ +F GG A N
Sbjct: 139 LFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCE----HGGFA--N 192
Query: 401 SVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459
V P +KT ++ + + ++++ + P G ++
Sbjct: 193 HVEFHPSGTCIAAAGTDKTVKVWDVRMN-RLLQHYQVHTAAVNSL---SFHPSGNYLITA 248
Query: 460 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
D L G+L + + H+ V + A+ G D + +WK
Sbjct: 249 SNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 221 (82.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 64/222 (28%), Positives = 102/222 (45%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G K C +FSP G + S S D + +W +K + F H TV +
Sbjct: 60 GHKDAVMCVQFSPSGHLVASGSRDKTVCLW---VPSVKGE-----STVFKAHTATVRSVH 111
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS D + L + S D IKVW + + L L + H V FS DG I S S D T
Sbjct: 112 FSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQ-HINWVRCARFSPDGRLIASASDDKTV 170
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ S + + F H + N F G+ + A +D TVKVWD++ LQ ++
Sbjct: 171 KLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHT 230
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVV 431
A+VNS+ P ++++ + S++ I+ L +G+++
Sbjct: 231 ------AAVNSLSFHPSG-NYLITASNDSTLKILDLLEGRLL 265
Score = 202 (76.2 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
CARFSPDG+ + S S D +++WD K ++ + +F H +EF
Sbjct: 151 CARFSPDGRLIASASDDKTVKLWD----KTSRECIH----SFCEHGGFANHVEFHPSGTC 202
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
+A+ D +KVW +R + L+ + H+ V SL F G+ +++ S DST +I L
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQHYQ-VHTAAVNSLSFHPSGNYLITASNDSTLKILDLLE 261
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
G+LL GH F+ G + SD V VW
Sbjct: 262 GRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 202 (76.2 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 69/257 (26%), Positives = 113/257 (43%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + + ++FS + + LASGS D +K+W ++ Q H + V + FS G
Sbjct: 16 FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKP-QMRAYCLVGHKDAVMCVQFSPSG 74
Query: 319 SQILSTSFDSTAR--IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ S S D T + +K + F+ H++ V F++DG +VTAS D T+KVW
Sbjct: 75 HLVASGSRDKTVCLWVPSVKGESTV--FKAHTATVRSVHFSSDGQSLVTASDDKTIKVWT 132
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN----KTSSIYIMTLQGQVVK 432
+ Q F L +N V +PD ++ + KT ++ T + + +
Sbjct: 133 VHR----QKF-----LFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSR-ECIH 182
Query: 433 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHH 492
SF GG P G I G D+ + + + +L +VH V ++ H
Sbjct: 183 SFCE---HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFH 239
Query: 493 PHRNLLATYGEDCTMKL 509
P N L T D T+K+
Sbjct: 240 PSGNYLITASNDSTLKI 256
Score = 151 (58.2 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 58/214 (27%), Positives = 88/214 (41%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R R H + +TS+ FS + Q+ S S DS +I +K GH V F+
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G V + S D TV +W + S T + A+V SVH F + +V +
Sbjct: 72 PSGHLVASGSRDKTVCLW-VPSVKGESTV-----FKAHTATVRSVH-FSSDGQSLVTASD 124
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
+I + T+ Q F + ++V A SP G I +D+ + + S +
Sbjct: 125 DKTIKVWTVHRQ---KFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECI 181
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H H V HP +A G D T+K+W
Sbjct: 182 HSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 225 (84.3 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 65/220 (29%), Positives = 104/220 (47%)
Query: 214 SH--AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 271
SH ++C S DG + +S S+D + +W+ SG Q TF+ H VL + F
Sbjct: 63 SHIVSDCV-ISSDGAYALSASWDKSLRLWELSSG--------QTTRTFVGHTNDVLSVSF 113
Query: 272 SRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFDS 328
S D+ + SGS+D IK+W G C + ++ H+E V+ + FS + I+S +D
Sbjct: 114 SADNRQIVSGSRDRTIKLWNTL-GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDK 172
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ L S +L + GH+ Y+N + DGS + D +WDL + L +
Sbjct: 173 LVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYS--- 229
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS-IYIMTLQ 427
L GD +H +P+ +C TSS I I L+
Sbjct: 230 ---LHAGD----EIHALVFSPNRYWLCAATSSSITIFDLE 262
Score = 181 (68.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 68/243 (27%), Positives = 108/243 (44%)
Query: 262 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRI-RSGQCL----RRLERAHSEGVTSLVFS 315
H+ V + S ++ ML SGS+D + +W + R Q R LE HS V+ V S
Sbjct: 14 HNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLE-GHSHIVSDCVIS 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
DG+ LS S+D + R+ L SG+ + F GH++ V F+ D ++V+ S D T+K+W
Sbjct: 73 SDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLW 132
Query: 376 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK--TSSIYIMTLQGQVVKS 433
+ DC T +G V+ V P NP + V+ + + + L +++
Sbjct: 133 NTLG-DCKYTITD----KGHTEWVSCVRFSP-NPQNPVIVSAGWDKLVKVWELASCRLQT 186
Query: 434 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-GVTHH 492
G G +SP G G+D + K HL +H D I +
Sbjct: 187 DHIGHT--GYINTVTISPDGSLCASGGKDGVTMLWDLNESK--HLYSLHAGDEIHALVFS 242
Query: 493 PHR 495
P+R
Sbjct: 243 PNR 245
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 59/220 (26%), Positives = 95/220 (43%)
Query: 298 LRRLERAHSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKS-----GKLLKEFRGHSSYV 351
LR H+ VTSL S + + +LS S D T I L G + GHS V
Sbjct: 7 LRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIV 66
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
+D + ++DG+ ++AS D ++++W+L S +TF G V SV F +
Sbjct: 67 SDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFV------GHTNDVLSVS-FSADNRQ 119
Query: 412 IVVCNKTSSIYIMTLQGQVVKSFSS-GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSH 470
IV ++ +I + G + + G E V +P+ I G D+ + +
Sbjct: 120 IVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWEL 179
Query: 471 QSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
S +L+ H + VT P +L A+ G+D LW
Sbjct: 180 ASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLW 219
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
K H E C RFSP+ Q +VS +D ++VW+ S +L+ D + H +
Sbjct: 145 KGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTD--------HIGHTGYIN 196
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
+ S D + ASG +DG +W + + L L A E + +LVFS + + + +
Sbjct: 197 TVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLH-AGDE-IHALVFSPNRYWLCAAT-S 253
Query: 328 STARIHGL-KSGKL--LK-EF--RGHSSYVNDAI---FTNDGSRVVTASSDCTVKVWDLK 378
S+ I L K K+ LK E+ +G S + + ++ DG + +D ++ W +
Sbjct: 254 SSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNKIRAWGVM 313
Query: 379 S 379
S
Sbjct: 314 S 314
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 233 (87.1 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 74/301 (24%), Positives = 126/301 (41%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C FS + + L S S D + +W +K Q +A F H + V C+
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWH-----MKP--QSRAYR-FTGHKDAVTCVN 68
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS +LASGS+D +++W + + + + RAH+ V S+ F DG +++ S D T
Sbjct: 69 FSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ + L H ++V A F+ DG +V+AS D TVK+WD S +C+ ++
Sbjct: 128 KVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE-- 185
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
GG V V P I +++ + + + + A
Sbjct: 186 --HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVW--DARTHRLLQHYQLHSAAVNALSFH 238
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
P G ++ D L G+L + + H+ V A+ G D + +W
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Query: 511 K 511
K
Sbjct: 299 K 299
Score = 230 (86.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 78/258 (30%), Positives = 119/258 (46%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + V C++FS +++ LASGS D + +W ++ R H + VT + FS G
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT-GHKDAVTCVNFSPSG 73
Query: 319 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ S S D T RI +K + FR H++ V F +DG +VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSLVTASDDKTVKVW- 130
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 432
ST Q F L +N V +PD ++V +KT ++ T + + +
Sbjct: 131 --STH-RQRF-----LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR-ECIH 181
Query: 433 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491
S+ E G FV P G I G D + + ++ +L ++H V ++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSF 237
Query: 492 HPHRNLLATYGEDCTMKL 509
HP N L T D T+K+
Sbjct: 238 HPSGNYLITASSDSTLKI 255
Score = 153 (58.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 56/214 (26%), Positives = 88/214 (41%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H + VT + FS + + S S DST I +K F GH V F+
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G + + S D TV++W + + T R A+V SVH F + +V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTV-----FRAHTATVRSVH-FCSDGQSLVTASD 123
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
++ + + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWSTHRQ---RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECI 180
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H H V V HP +A G D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 215 (80.7 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 55/159 (34%), Positives = 80/159 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S E R + + +V+ S G I VWD + K+ + T M H + ++
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR--------TLMGHKANICSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369
++ L +GK++ EF GH+ VN F + + + SSD
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 173 (66.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V + + E++ +GSQ G I+VW + + + LR L H + SL F G +
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPYGEFV 120
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
S S D+ ++ ++ + +RGHS V F+ DG + +A+ D TVK+WDL +
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 382 CLQTFKPPPPLRGGDASVNSVHLFP 406
+ F P G VN V P
Sbjct: 181 MMSEF-P-----GHTGPVNVVEFHP 199
Score = 141 (54.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + S +LA+G D ++ +W I C+ L H+ V S+ +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVRLN 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F G V + S D +K+W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ ++
Sbjct: 133 DIRRKGCVFRYR 144
Score = 139 (54.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 45/204 (22%), Positives = 86/204 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 130
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 186
Query: 481 VHEKDVIGVTHHPHRNLLATYGED 504
H V V HP+ LLA+ D
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSD 210
Score = 124 (48.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/177 (23%), Positives = 75/177 (42%)
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
K+ L+E H+S V+ + R++ T DC V +W + +C+ + L G
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTG 61
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
+ V SV L P+ ++V S SI + L+ + G + + + P G
Sbjct: 62 HTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYG 117
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E++ +D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 82/342 (23%), Positives = 151/342 (44%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G K+D ++ P G +S F P +VS S D I+VWDY +G
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF 142
Query: 248 KKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
++ L+ H ++V I F ++LAS S D IK+W + +C+R + H
Sbjct: 143 ERTLKG--------HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH-GHDH 193
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
V+S+ +G I+S S D T ++ +++G +K F GH +V DG+ + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI------ 421
+D TV+VW + + +C LR + V + P++ + + T S
Sbjct: 254 NDQTVRVWVVATKEC------KAELREHEHVVECISWAPES-SYSTISEATGSETKKSGK 306
Query: 422 ---YIMT-LQGQVVKSF--SSGK----REGGD-FVAACVSPKG-EWIYCVGEDRNLYCFS 469
++++ + + +K + S+G G D +V + G ++I +D+ L +
Sbjct: 307 PGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Query: 470 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
++ + + HE V + H + T D T+K+W+
Sbjct: 367 FKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 58/204 (28%), Positives = 88/204 (43%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 209 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 247 LKKDL---QYQADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRS 294
K +L ++ + + + I + SE L SGS+D IK+W I +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDIST 327
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
G CL L H V ++F G ILS + D T R+ K+ + +K H +V
Sbjct: 328 GMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSL 386
Query: 355 IFTNDGSRVVTASSDCTVKVWDLK 378
F VVT S D TVKVW+ +
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 227 (85.0 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 67/233 (28%), Positives = 106/233 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+D + +WD G + F H + V+ + FS D+ + SG
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGV--------STRLFKGHTQDVMSVAFSSDNRQIISG 130
Query: 282 SQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
S+D IKVW G+C LE AH + V+ + FS + I+S S+D+ +I +KS K
Sbjct: 131 SRDATIKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFK 189
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
H+ YVN + DGS + D +W+L S L + + S
Sbjct: 190 CNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSP 249
Query: 400 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSSGKR-EGGDFVAACVS 450
N L D I++ + + + + +V + +F S K+ E AC+S
Sbjct: 250 NKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPACLS 302
Score = 186 (70.5 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 54/168 (32%), Positives = 87/168 (51%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FS D + ++S S D I+VW+ L G+ K L+ E H + V CI FS ++ + S
Sbjct: 120 FSSDNRQIISGSRDATIKVWNTL-GECKFTLE--GPEA---HQDWVSCIRFSPNTPTIVS 173
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
GS D K+K+W I+S +C L H+ V ++ S DGS S D+ A + L SGK
Sbjct: 174 GSWDNKVKIWDIKSFKCNHTLTD-HTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKP 232
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
L + ++ +N F+ + ++A++D + +WDL + L P
Sbjct: 233 LYKLEARNT-INALAFSPN-KYWLSAATDDKIIIWDLLTKQVLAEIVP 278
Score = 174 (66.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 64/257 (24%), Positives = 115/257 (44%)
Query: 262 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRS------GQCLRRLERAHSEGVTSLVF 314
H+ V I S ++ + + S S+D + VW++ G+ R L + HS V +V
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSL-KGHSHFVQDVVI 78
Query: 315 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
S DG LS S+D+T R+ + G + F+GH+ V F++D ++++ S D T+KV
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKV 138
Query: 375 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSF 434
W+ +C T + P + V+ + P P IV + + + I ++ K
Sbjct: 139 WNTLG-ECKFTLEGPEAHQDW---VSCIRFSPNTPT-IVSGSWDNKVKIWDIKS--FKCN 191
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHP 493
+ G +SP G G+D + SGK L K+ ++ I + P
Sbjct: 192 HTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGK--PLYKLEARNTINALAFSP 249
Query: 494 HRNLLATYGEDCTMKLW 510
++ L+ +D + +W
Sbjct: 250 NKYWLSAATDDKII-IW 265
Score = 173 (66.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 50/167 (29%), Positives = 78/167 (46%)
Query: 222 SPDG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
SP+ ++S S D + VW +A + H V + S D + S
Sbjct: 30 SPENPDTIISSSRDKTVMVWQLTPTDATSP--GKAHRSLKGHSHFVQDVVISHDGQFALS 87
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
GS D +++W I G R L + H++ V S+ FS D QI+S S D+T ++ + L K
Sbjct: 88 GSWDNTLRLWDITKGVSTR-LFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECK 146
Query: 340 LLKEF-RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
E H +V+ F+ + +V+ S D VK+WD+KS C T
Sbjct: 147 FTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHT 193
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 58/216 (26%), Positives = 96/216 (44%)
Query: 305 HSEGVTSLVFSRDGSQ-ILSTSFDSTARIHGL------KSGKLLKEFRGHSSYVNDAIFT 357
H+ VTS+ S + I+S+S D T + L GK + +GHS +V D + +
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVIS 79
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
+DG ++ S D T+++WD+ + FK G V SV F + I+ ++
Sbjct: 80 HDGQFALSGSWDNTLRLWDITKGVSTRLFK------GHTQDVMSV-AFSSDNRQIISGSR 132
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKL 475
++I + G+ K G D+V+ C+ SP I D + + +S K
Sbjct: 133 DATIKVWNTLGEC-KFTLEGPEAHQDWVS-CIRFSPNTPTIVSGSWDNKVKIWDIKSFKC 190
Query: 476 EHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
H + H V VT P +L A+ G+D LW+
Sbjct: 191 NHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWE 226
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 211 GTKSHAE---CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
G ++H + C RFSP+ +VS S+D +++WD S ++ + T H V
Sbjct: 151 GPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKS--------FKCNHTLTDHTGYVN 202
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
+ S D + ASG +D +W + SG+ L +LE ++ + +L FS + LS + D
Sbjct: 203 TVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNT--INALAFSPN-KYWLSAATD 259
Query: 328 STARIHGLKSGKLLKE 343
I L + ++L E
Sbjct: 260 DKIIIWDLLTKQVLAE 275
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 224 (83.9 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 65/220 (29%), Positives = 104/220 (47%)
Query: 214 SH--AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 271
SH ++C S DG + +S S+D + +W+ +G + F+ H VL + F
Sbjct: 63 SHIVSDCV-ISSDGAYALSASWDKTLRLWELATGTTTR--------RFVGHTNDVLSVSF 113
Query: 272 SRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFDS 328
S D+ + SGS+D IK+W G C + E+ HSE V+ + FS + I+S+ +D
Sbjct: 114 SADNRQIVSGSRDRSIKLWNTL-GDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDK 172
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ L S KL + GH+ Y+N + DGS + D T +WDL + L +
Sbjct: 173 LVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYS--- 229
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQ 427
L D +H +P+ +C T SSI I L+
Sbjct: 230 ---LNAND----EIHALVFSPNRYWLCAATASSIIIFDLE 262
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 60/240 (25%), Positives = 102/240 (42%)
Query: 262 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSR 316
H+ V + S ++ ML S S+D + +W + + +R + HS V+ V S
Sbjct: 14 HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISS 73
Query: 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
DG+ LS S+D T R+ L +G + F GH++ V F+ D ++V+ S D ++K+W+
Sbjct: 74 DGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWN 133
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 436
DC T +G V+ V P NP + V+ + + + K +
Sbjct: 134 TLG-DCKYTITE----KGHSEWVSCVRFSP-NPQNPVIVSSGWDKLVKVWELSSCKLQTD 187
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-GVTHHPHR 495
G +SP G G+D + K HL ++ D I + P+R
Sbjct: 188 HIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESK--HLYSLNANDEIHALVFSPNR 245
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 59/213 (27%), Positives = 95/213 (44%)
Query: 305 HSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKS-----GKLLKEFRGHSSYVNDAIFTN 358
H+ VTSL S + + +LS+S D T I L G + +GHS V+D + ++
Sbjct: 14 HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISS 73
Query: 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 418
DG+ ++AS D T+++W+L + + F G V SV F + IV ++
Sbjct: 74 DGAYALSASWDKTLRLWELATGTTTRRFV------GHTNDVLSVS-FSADNRQIVSGSRD 126
Query: 419 SSIYIMTLQGQVVKSFSS-GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
SI + G + + G E V +P+ I G D+ + + S KL+
Sbjct: 127 RSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQT 186
Query: 478 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H + VT P +L A+ G+D T LW
Sbjct: 187 DHIGHTGYINTVTISPDGSLCASGGKDGTTMLW 219
Score = 126 (49.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 50/180 (27%), Positives = 82/180 (45%)
Query: 213 KSHAE---CARFSPDGQ--FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
K H+E C RFSP+ Q +VS +D ++VW+ S KL+ D + H +
Sbjct: 145 KGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTD--------HIGHTGYIN 196
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
+ S D + ASG +DG +W + + L L A+ E + +LVFS + + + +
Sbjct: 197 TVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLN-ANDE-IHALVFSPNRYWLCAATAS 254
Query: 328 STARIHGLKSGKL--LK-EFR--GHSSYVNDAI---FTNDGSRVVTASSDCTVKVWDLKS 379
S K K+ LK EF G S + I ++ DG + +D ++ W + S
Sbjct: 255 SIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTDNIIRAWGVMS 314
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 214 (80.4 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 58/178 (32%), Positives = 87/178 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 31 SSDGQFALSGSWDGTLRLWDLTTGTTTR--------RFVGHTKDVLSVAFSSDNRQIVSG 82
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ +HSE V+ + FS + S I+S +D ++ L +
Sbjct: 83 SRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 141
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 396
KL GH+ Y+N + DGS + D +WDL L T L GGD
Sbjct: 142 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDGGD 193
Score = 160 (61.4 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 299 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 358
+R R HS V+ +V S DG LS S+D T R+ L +G + F GH+ V F++
Sbjct: 15 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 74
Query: 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNK 417
D ++V+ S D T+K+W+ C T + V+ V P + + I+V C
Sbjct: 75 DNRQIVSGSRDKTIKLWNTLGV-CKYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGW 129
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
+ + L +K+ G G VSP G G+D + GK H
Sbjct: 130 DKLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--H 185
Query: 478 LMKVHEKDV 486
L + D+
Sbjct: 186 LYTLDGGDI 194
Score = 149 (57.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V + S D + SGS DG +++W + +G RR H++ V S+ FS D QI
Sbjct: 21 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQI 79
Query: 322 LSTSFDSTARI-HGLKSGKLLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDL 377
+S S D T ++ + L K + HS +V+ F+ + S +V+ D VKVW+L
Sbjct: 80 VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 138
Score = 121 (47.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 46/148 (31%), Positives = 69/148 (46%)
Query: 202 TTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
TT + T +F G FS D + +VS S D I++W+ L G K +Q DE+
Sbjct: 52 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQ---DES-- 105
Query: 261 MHDETVLCIEFSRDSE--MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
H E V C+ FS +S ++ S D +KVW + + + L+ H+ + ++ S DG
Sbjct: 106 -HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG 163
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRG 346
S S D A + L GK L G
Sbjct: 164 SLCASGGKDGQAMLWDLNEGKHLYTLDG 191
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 232 (86.7 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 78/304 (25%), Positives = 131/304 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C FS + + L S S D + VW +K Q +A F H + V C+
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWH-----MKP--QSRAYR-FTGHKDAVTCVN 68
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS +LASGS+D +++W + + + + RAH+ V S+ F DG ++ S D T
Sbjct: 69 FSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ K L H ++V A F+ DG +V+AS D TVK+WD S +C+ ++
Sbjct: 128 KVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-- 185
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFS--SGKREGGDFVAA 447
GG V V P I +++ + ++ ++++ + S G F
Sbjct: 186 --HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF--- 237
Query: 448 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 507
P G ++ D L G+L + + H+ V A+ G D +
Sbjct: 238 --HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 508 KLWK 511
+WK
Sbjct: 296 MVWK 299
Score = 228 (85.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 79/258 (30%), Positives = 119/258 (46%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + V C++FS +++ LASGS D + VW ++ R H + VT + FS G
Sbjct: 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFT-GHKDAVTCVNFSPSG 73
Query: 319 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ S S D T RI +K + FR H++ V F +DG VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTVKVW- 130
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 432
+T Q F L +N V +PD ++V +KT ++ + + + V
Sbjct: 131 --ATH-RQKF-----LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSR-ECVH 181
Query: 433 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491
S+ E G FV P G I G D + + ++ +L ++H V G++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF 237
Query: 492 HPHRNLLATYGEDCTMKL 509
HP N L T D T+K+
Sbjct: 238 HPSGNYLITASSDSTLKI 255
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 55/214 (25%), Positives = 86/214 (40%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H + VT + FS + Q+ S S DS + +K F GH V F+
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G + + S D TV++W + + T R A+V SVH F + V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTV-----FRAHTATVRSVH-FCSDGQSFVTASD 123
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
++ + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWATHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECV 180
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H H V V HP +A G D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 229 (85.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 83/323 (25%), Positives = 136/323 (42%)
Query: 189 TAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLK 248
T A+ Q ED P+ H K G + C FS + + L S S D + VW +K
Sbjct: 32 TMALPQ--ED--PSLERH-FK-GHRDAVTCVDFSFNMKQLASGSMDSCLMVWH-----MK 80
Query: 249 KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 308
Q +A F H + V C+ FS +LASGS+D +++W + + + + RAH+
Sbjct: 81 P--QSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTAT 136
Query: 309 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368
V S+ F DG ++ S D T ++ K L H ++V A F+ DG +V+AS
Sbjct: 137 VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 196
Query: 369 DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG 428
D TVK+WD S +C+ ++ GG V V P + +++ + ++
Sbjct: 197 DKTVKLWDKTSRECVHSYCE----HGG--FVTYVDFHPSGTC-VAAAGMDNTVKVWDVRT 249
Query: 429 QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG 488
+ + A P G ++ D L G+L + + H+
Sbjct: 250 H--RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATT 307
Query: 489 VTHHPHRNLLATYGEDCTMKLWK 511
V A+ G D + +WK
Sbjct: 308 VAFSRTGEYFASGGSDEQVMVWK 330
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 231 (86.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 77/308 (25%), Positives = 137/308 (44%)
Query: 206 HTIKFGTKSHAECARFS-PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264
HT++ G ++ F+ P G + + SFD ++W +GK Y TF H
Sbjct: 128 HTLE-GHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCF----Y----TFRGHTA 178
Query: 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 324
++C+ F+ S ++A+GS D K+W + SG+ + L H + SL F+ G ++++
Sbjct: 179 EIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLA-GHFAEIISLCFNTTGDRLVTG 237
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
SFD TA + + SG+ + GH ++ F D S + TAS D + KVWD + CL
Sbjct: 238 SFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLA 297
Query: 385 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK--TSSIYIMTLQGQVVKSFSSGKREGG 442
T L G + V V F I + TS ++ T Q + K G
Sbjct: 298 T------LLGHNDEVLDV-CFNYTGQLIATASADGTSRVF-STDTFQCLCQLEGHK---G 346
Query: 443 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 502
+ C + +G + D+ + ++G +++ H ++ + + + T
Sbjct: 347 EISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGS 406
Query: 503 EDCTMKLW 510
+D T ++W
Sbjct: 407 KDNTCRIW 414
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD-SEMLA 279
F+ G ++ S+D ++WD SG+ +L T H V I F+ + +A
Sbjct: 100 FNKSGSCFITGSYDRTCKIWDTASGE---ELH-----TLEGHRNVVYAIAFNNPYGDKVA 151
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
+GS D K+W +G+C R H+ + L F+ + + + S D+TA++ ++SG+
Sbjct: 152 TGSFDKTCKLWSAETGKCFYTF-RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGE 210
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+ GH + + F G R+VT S D T +WD+ S
Sbjct: 211 EVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS 250
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 62/246 (25%), Positives = 111/246 (45%)
Query: 269 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD-GSQILSTSFD 327
+ F++ +GS D K+W SG+ L LE H V ++ F+ G ++ + SFD
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTASGEELHTLE-GHRNVVYAIAFNNPYGDKVATGSFD 156
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
T ++ ++GK FRGH++ + F + V T S D T K+WD++S + + T
Sbjct: 157 KTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVST-- 214
Query: 388 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGDFVA 446
L G A + S+ F D +V + + + + G+ V S G R G+
Sbjct: 215 ----LAGHFAEIISL-CFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS-GHR--GEI-- 264
Query: 447 ACVSPKGEW--IYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+CV + I D++ + + G+ + H +V+ V + L+AT D
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASAD 324
Query: 505 CTMKLW 510
T +++
Sbjct: 325 GTSRVF 330
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/214 (24%), Positives = 92/214 (42%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R +AH +T++ F++ GS ++ S+D T +I SG+ L GH + V F
Sbjct: 84 LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 358 ND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 416
N G +V T S D T K+W ++ C TF RG A + + NP +V
Sbjct: 144 NPYGDKVATGSFDKTCKLWSAETGKCFYTF------RGHTAEIVCLAF---NPQSTLVAT 194
Query: 417 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
+ + + S+ + ++ C + G+ + D + SG+
Sbjct: 195 GSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKV 254
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H++ H ++ V + +L+AT D + K+W
Sbjct: 255 HVLSGHRGEISCVQFNWDCSLIATASLDKSCKVW 288
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 223 (83.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 65/214 (30%), Positives = 105/214 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S ++DG + +WD +G + F+ H + VL + FS D+ + SG
Sbjct: 72 SSDGQFALSGAWDGTLRLWDLTTGLTTR--------RFVGHTKDVLSVAFSADNRQIVSG 123
Query: 282 SQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W G C ++ H+E V+ + FS + S I+S +D ++ L +
Sbjct: 124 SRDKTIKLWNTL-GVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANC 182
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
KL GH+ Y+N + DGS + D +WDL L T L GD
Sbjct: 183 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LDSGDV- 235
Query: 399 VNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVV 431
+N++ F +P+ +C T SI I L+G+++
Sbjct: 236 INAL-CF--SPNRYWLCAATGPSIKIWDLEGKII 266
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/242 (27%), Positives = 107/242 (44%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCL----RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+M+ S S+D I +W++ + +R + HS V+ +V S DG LS ++D T R
Sbjct: 29 DMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLR 88
Query: 332 IHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
+ L +G + F GH+ V F+ D ++V+ S D T+K+W+ C T +
Sbjct: 89 LWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGV-CKYTIQD--- 144
Query: 392 LRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450
G V+ V P + + I+V C + + L +K+ G G VS
Sbjct: 145 -EGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHT--GYLNTVTVS 201
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATYGEDCTMK 508
P G G+D + GK HL + DVI + P+R L A G ++K
Sbjct: 202 PDGSLCASGGKDGQAMLWDLNEGK--HLYTLDSGDVINALCFSPNRYWLCAATGP--SIK 257
Query: 509 LW 510
+W
Sbjct: 258 IW 259
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 67/243 (27%), Positives = 111/243 (45%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMM-HDETVLCIEFSRDSEMLAS 280
PD ++S S D I +W KL +D Y + + H V + S D + S
Sbjct: 28 PD--MILSASRDKSIIMW-----KLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGK 339
G+ DG +++W + +G RR H++ V S+ FS D QI+S S D T ++ + L K
Sbjct: 81 GAWDGTLRLWDLTTGLTTRRFV-GHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCK 139
Query: 340 LLKEFRGHSSYVNDAIFTNDGSR--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ GH+ +V+ F+ + S +V+ D VKVW+L +C K G
Sbjct: 140 YTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL--ANC----KLKTNHIGHTG 193
Query: 398 SVNSVHLFPKNPDHIVVCN--KTSSIYIMTL-QGQVVKSFSSGKREGGDFV-AACVSPKG 453
+N+V + +PD + + K + L +G+ + + SG D + A C SP
Sbjct: 194 YLNTVTV---SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSG-----DVINALCFSPNR 245
Query: 454 EWI 456
W+
Sbjct: 246 YWL 248
Score = 136 (52.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 48/160 (30%), Positives = 79/160 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE--ML 278
FS D + +VS S D I++W+ L G K +Q DE H E V C+ FS +S ++
Sbjct: 113 FSADNRQIVSGSRDKTIKLWNTL-GVCKYTIQ---DEG---HTEWVSCVRFSPNSSNPII 165
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
S D +KVW + + + L+ H+ + ++ S DGS S D A + L G
Sbjct: 166 VSCGWDKMVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
K L + S V +A+ + + A++ ++K+WDL+
Sbjct: 225 KHL--YTLDSGDVINALCFSPNRYWLCAATGPSIKIWDLE 262
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 216 (81.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 59/182 (32%), Positives = 91/182 (50%)
Query: 209 KFGTK-SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TK S + F P ++++ G I ++DY ++K L+ + DE H+ V
Sbjct: 4 KFETKASRVKGLSFHPTRPWILASLHSGSIHLYDY---RIKTLLE-KFDE----HEGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I F + SG D KIKVW + +CL L + H + + S+ F R+ I+S+S D
Sbjct: 56 GINFHMTQPLFVSGGDDYKIKVWNYKQRRCLFTL-KGHKDYIRSVEFHREAPWIVSSSDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC-LQTF 386
RI +S + E GH+ YV A+F VV+AS D T+++WD+ + T
Sbjct: 115 MVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTTV 174
Query: 387 KP 388
KP
Sbjct: 175 KP 176
Score = 73 (30.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 26/120 (21%), Positives = 48/120 (40%)
Query: 392 LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSP 451
L G D VN P P +IV + + + + +V +F + + A P
Sbjct: 200 LEGHDRGVNWASFHPTQP-YIVSASDDHQVKLWRMNDPIVDTF---RGHYNNVSCALFHP 255
Query: 452 KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ + I ED+ + + H+++ + HP++NL A G D M ++K
Sbjct: 256 RQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQNLFAA-GHDSGMIVFK 314
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 232 (86.7 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 75/342 (21%), Positives = 154/342 (45%)
Query: 176 LLPPGTQF--DLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSF 233
++ P T + D+ A +D P+ +H K +++P+G+ LV ++
Sbjct: 54 VVEPETSYTIDIMPPNAYRGRDRVINLPSKFTHLSSNKVKHVIPAIQWTPEGRRLVVATY 113
Query: 234 DGFIEVWDYLSGKLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWRI 292
G +W+ S ET M HD V +++S DS+ + SG DG IK+W+
Sbjct: 114 SGEFSLWNASSFTF---------ETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQP 164
Query: 293 RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVN 352
++ ++ AH+E + + FS + S+ ++ S D+ +I +GK + GH V
Sbjct: 165 NFSM-VKEIDAAHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVK 223
Query: 353 DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHI 412
+ + + +AS D VK+WD +S +C+ + L+ +V P + +
Sbjct: 224 SCDWHPEMGLIASASKDNLVKLWDPRSGNCISSI-----LKFKH-TVLKTRFQPTKGNLL 277
Query: 413 VVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQ 471
+ +K S + ++ + + R+ D++ P E ++ + D +L F
Sbjct: 278 MAISKDKSCRVFDIRYSMKELMCV--RDETDYMTLEWHPINESMFTLACYDGSLKHFDLL 335
Query: 472 SGKLEHLMKV---HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E ++ + H+K + ++++P ++ AT +D T++ W
Sbjct: 336 QNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRFW 377
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 230 (86.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 80/305 (26%), Positives = 132/305 (43%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
F P + SCS D I+VWDY +G+L++ L+ H + V I + L S
Sbjct: 114 FHPLWTIMASCSEDATIKVWDYETGQLERTLKG--------HTDAVNDIAIDAAGKQLVS 165
Query: 281 GSQDGKIKVWRI-RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
S D IK+W ++ CL+ L + H V+S+ F G +LS S D T + + +G
Sbjct: 166 CSSDLSIKLWDFGQTYDCLKSL-KGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGY 224
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
+ FRGH+ +V +NDG+ +AS D TV VW + LR + +V
Sbjct: 225 CVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV------LRDHEHAV 278
Query: 400 NSVHLFPKNPDHIVVCNKT--SSIYIMTLQGQVVKSFSSGKREGGDFVAACVS------- 450
V P V + +S +I+ G +S + GD + ++
Sbjct: 279 ECVEWAPDTAYTNVTGQQPEGNSTHIL-FSGSRDRSIKAWNINTGDVLFTLLAHENWVRG 337
Query: 451 ----PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 506
PKG+++ V +D+ L + + + ++ HE V V H + T D +
Sbjct: 338 LAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMS 397
Query: 507 MKLWK 511
K+W+
Sbjct: 398 CKVWE 402
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 51/174 (29%), Positives = 76/174 (43%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS---- 275
R S DG S S D + VW + + K L+ D H+ V C+E++ D+
Sbjct: 240 RISNDGTLFASASLDQTVTVWSFATKSAKLVLR---D-----HEHAVECVEWAPDTAYTN 291
Query: 276 -----------EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 324
+L SGS+D IK W I +G L L AH V L F G ++S
Sbjct: 292 VTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTL-LAHENWVRGLAFHPKGKYLISV 350
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
+ D T R+ L + + +K H +V+ F V+T S D + KVW+ +
Sbjct: 351 ADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 50/187 (26%), Positives = 93/187 (49%)
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364
H +T ++F + + S S D+T ++ ++G+L + +GH+ VND G ++V
Sbjct: 105 HRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLV 164
Query: 365 TASSDCTVKVWDLKST-DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYI 423
+ SSD ++K+WD T DCL++ L+G + +V+SV P D ++ ++ +I
Sbjct: 165 SCSSDLSIKLWDFGQTYDCLKS------LKGHEHTVSSVTFLPTG-DFVLSASRDHTIKQ 217
Query: 424 MTLQ-GQVVKSFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNL--YCFSHQSGKLEHLM 479
+ G V +F R D+V +S G D+ + + F+ +S KL ++
Sbjct: 218 WDISTGYCVYTF----RGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKL--VL 271
Query: 480 KVHEKDV 486
+ HE V
Sbjct: 272 RDHEHAV 278
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 230 (86.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 56/180 (31%), Positives = 89/180 (49%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
CARFSPDG+ +VS S D +++WD K ++ + ++ H V ++F
Sbjct: 150 CARFSPDGRLIVSASDDKTVKLWD----KTSRECVH----SYCEHGGFVTYVDFHPSGTC 201
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
+A+ S D +KVW +R+ + L+ + HS V +L F G+ +L+ S DST +I L
Sbjct: 202 IAAASMDNTVKVWDVRTHRLLQHYQ-LHSAAVNALSFHPSGNYLLTASSDSTLKILDLME 260
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW----DLKS-TDCLQTFKPPPPL 392
G+LL GH F+ G + SD V VW D+ + ++ +PP PL
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVVDYREVIKVHRPPAPL 320
Score = 227 (85.0 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 75/291 (25%), Positives = 125/291 (42%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FS + + L S S D + VW +K Q +A F H + V C+ FS +LAS
Sbjct: 27 FSLNTKQLASGSMDSCLMVWH-----MKP--QSRAYR-FAGHKDAVTCVNFSPSGHLLAS 78
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
GS+D +++W I + + + RAH+ V S+ F DG +++ S D T ++ K
Sbjct: 79 GSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKF 137
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
L H ++V A F+ DG +V+AS D TVK+WD S +C+ ++ GG V
Sbjct: 138 LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE----HGG--FVT 191
Query: 401 SVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 460
V P I + +++ + ++ + + A P G ++
Sbjct: 192 YVDFHPSGTC-IAAASMDNTVKVWDVRTH--RLLQHYQLHSAAVNALSFHPSGNYLLTAS 248
Query: 461 EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
D L G+L + + H+ V A+ G D + +WK
Sbjct: 249 SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 215 (80.7 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 65/229 (28%), Positives = 105/229 (45%)
Query: 205 SHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263
S +F G K C FSP G L S S D + +W +K + F H
Sbjct: 52 SRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW---IPNVKGE-----STVFRAHT 103
Query: 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 323
TV + F D + L + S D +KVW + L L + H V FS DG I+S
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCARFSPDGRLIVS 162
Query: 324 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 383
S D T ++ S + + + H +V F G+ + AS D TVKVWD+++ L
Sbjct: 163 ASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLL 222
Query: 384 QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVV 431
Q ++ L A+VN++ P ++++ + S++ I+ L +G+++
Sbjct: 223 QHYQ----LHS--AAVNALSFHPSG-NYLLTASSDSTLKILDLMEGRLL 264
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 77/258 (29%), Positives = 117/258 (45%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + + ++FS +++ LASGS D + VW ++ R H + VT + FS G
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFA-GHKDAVTCVNFSPSG 73
Query: 319 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ S S D T RI +K + FR H++ V F +DG +VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWIPNVKGESTV--FRAHTATVRSVHFCSDGQSLVTASDDKTVKVW- 130
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 432
ST Q F L +N V +PD ++V +KT ++ T + + V
Sbjct: 131 --STH-RQKF-----LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSR-ECVH 181
Query: 433 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491
S+ E G FV P G I D + + ++ +L ++H V ++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 237
Query: 492 HPHRNLLATYGEDCTMKL 509
HP N L T D T+K+
Sbjct: 238 HPSGNYLLTASSDSTLKI 255
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/214 (25%), Positives = 88/214 (41%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H + +TS+ FS + Q+ S S DS + +K F GH V F+
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G + + S D TV++W + + T R A+V SVH F + +V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-IPNVKGESTV-----FRAHTATVRSVH-FCSDGQSLVTASD 123
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
++ + + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWSTHRQ---KFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H H V V HP +A D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVW 214
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 230 (86.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 62/255 (24%), Positives = 119/255 (46%)
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
TF H ++C+ F+ S ++A+GS D K+W I+SG+ + L H + SL F
Sbjct: 172 TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLT-GHLAEIISLSFDTS 230
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
G +I++ SFD T + +G+ + GH + ++ A+F+ D S ++T S D T +WD
Sbjct: 231 GDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDA 290
Query: 378 KSTDCLQTFKPPPPLRGGDASV-NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 436
S C+ T L G D + +S + + T+ +Y T + + K
Sbjct: 291 TSGKCVAT------LTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKL--E 342
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
G G+ +P+G + D+ + Q+G+ +++ H ++ + N
Sbjct: 343 GHE--GEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGN 400
Query: 497 LLATYGEDCTMKLWK 511
++ T +D + ++W+
Sbjct: 401 IVITGSKDNSCRIWR 415
Score = 218 (81.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 55/181 (30%), Positives = 93/181 (51%)
Query: 206 HTIKFGTKSHAECARFS-PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264
HT++ G ++ F+ P G + + SFD ++W +GK Y TF H
Sbjct: 128 HTLE-GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKC-----YH---TFRGHTA 178
Query: 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 324
++C+ F+ S ++A+GS D K+W I+SG+ + L H + SL F G +I++
Sbjct: 179 EIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLT-GHLAEIISLSFDTSGDRIITG 237
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
SFD T + +G+ + GH + ++ A+F+ D S ++T S D T +WD S C+
Sbjct: 238 SFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVA 297
Query: 385 T 385
T
Sbjct: 298 T 298
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 47/167 (28%), Positives = 80/167 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
F G +++ SFD + VWD +G+ T + H + FS D ++ +
Sbjct: 227 FDTSGDRIITGSFDHTVVVWDASTGRKV--------HTLIGHCAEISSALFSWDCSLILT 278
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
GS D +W SG+C+ L H + + F G I + S D TAR++ + K
Sbjct: 279 GSMDKTCMLWDATSGKCVATLT-GHDDEILDSCFDYTGKLIATASADGTARVYNATTRKC 337
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
+ + GH ++ F G+R++T SSD T ++WD+++ CLQ +
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLE 384
Score = 204 (76.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 63/252 (25%), Positives = 114/252 (45%)
Query: 262 HDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
H V I F+ + +A+GS D K+W +G+C R H+ + L F+ +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTF-RGHTAEIVCLSFNPQSTV 191
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
+ + S D+TA++ ++SG+ + GH + + F G R++T S D TV VWD +
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTG 251
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV--CNKTSSIYIMTLQGQVVKSFSSGK 438
+ T L G A ++S LF + I+ +KT ++ T G+ V + +
Sbjct: 252 RKVHT------LIGHCAEISSA-LFSWDCSLILTGSMDKTCMLWDAT-SGKCVATLTGHD 303
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 498
E + +C G+ I D ++ + K ++ HE ++ ++ +P N L
Sbjct: 304 DE---ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRL 360
Query: 499 ATYGEDCTMKLW 510
T D T ++W
Sbjct: 361 LTGSSDKTARIW 372
Score = 197 (74.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 48/170 (28%), Positives = 86/170 (50%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265
HT+ G + A FS D +++ S D +WD SGK T HD+
Sbjct: 255 HTL-IGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVA--------TLTGHDDE 305
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 325
+L F +++A+ S DG +V+ + +C+ +LE H ++ + F+ G+++L+ S
Sbjct: 306 ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLE-GHEGEISKISFNPQGNRLLTGS 364
Query: 326 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
D TARI +++G+ L+ GH+ + F G+ V+T S D + ++W
Sbjct: 365 SDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 183 (69.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD-SEMLASGSQ 283
G ++ S+D +VWD SG+ +L T H V I F+ + +A+GS
Sbjct: 104 GSCFITGSYDRTCKVWDTASGE---ELH-----TLEGHRNVVYAIAFNNPYGDKIATGSF 155
Query: 284 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE 343
D K+W +G+C R H+ + L F+ + + + S D+TA++ ++SG+ +
Sbjct: 156 DKTCKLWSAETGKCYHTF-RGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVT 214
Query: 344 FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
GH + + F G R++T S D TV VWD
Sbjct: 215 LTGHLAEIISLSFDTSGDRIITGSFDHTVVVWD 247
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 65/273 (23%), Positives = 116/273 (42%)
Query: 246 KLKKDLQYQADETFMM------HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299
+L++ L+ D F + H + + ++ +GS D KVW SG+ L
Sbjct: 69 RLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELH 128
Query: 300 RLERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 358
LE H V ++ F+ G +I + SFD T ++ ++GK FRGH++ + F
Sbjct: 129 TLE-GHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNP 187
Query: 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 418
+ V T S D T K+WD++S + + T L G A + S+ F + D I+ +
Sbjct: 188 QSTVVATGSMDTTAKLWDIQSGEEVVT------LTGHLAEIISLS-FDTSGDRIITGSFD 240
Query: 419 SSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
++ + G+ V + E +A S I D+ + SGK
Sbjct: 241 HTVVVWDASTGRKVHTLIGHCAE---ISSALFSWDCSLILTGSMDKTCMLWDATSGKCVA 297
Query: 478 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ H+ +++ L+AT D T +++
Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 234 (87.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 61/170 (35%), Positives = 91/170 (53%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C +F + L + S+D I++WD +G+ +L+ T H+ + C++F D
Sbjct: 354 CLQF--EDNILATGSYDTTIKIWDTETGE---ELR-----TLRGHESGIRCLQF--DDTK 401
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
L SGS D IKVW R+G+C+ H GV L F D S + S S D T +I +
Sbjct: 402 LISGSMDRTIKVWNWRTGECISTYT-GHRGGVIGLHF--DASILASGSVDKTVKIWNFED 458
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTF 386
K RGH+ +VN A+ + SR V +AS DCTV++WDL + C++TF
Sbjct: 459 -KSTFSLRGHTDWVN-AVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTF 506
Score = 185 (70.2 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 49/148 (33%), Positives = 78/148 (52%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H V+C++F + +LA+GS D IK+W +G+ LR L R H G+ L F
Sbjct: 343 KTFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTL-RGHESGIRCLQF-- 397
Query: 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
D ++++S S D T ++ ++G+ + + GH V F D S + + S D TVK+W+
Sbjct: 398 DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DASILASGSVDKTVKIWN 455
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHL 404
+ TF LRG VN+V +
Sbjct: 456 FEDKS---TFS----LRGHTDWVNAVRV 476
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 73/311 (23%), Positives = 122/311 (39%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G +S C +F D L+S S D I+VW++ +G + T+ H V+ +
Sbjct: 387 GHESGIRCLQF--DDTKLISGSMDRTIKVWNWRTG--------ECISTYTGHRGGVIGLH 436
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F D+ +LASGS D +K+W R H++ V ++ + S S D T
Sbjct: 437 F--DASILASGSVDKTVKIWNFEDKSTFSL--RGHTDWVNAVRVDTSSRTVFSASDDCTV 492
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAI-----FTNDGSRVVTASSDCTVKVWDLK--STDCL 383
R+ L + ++ F GH V + F + + D + D S
Sbjct: 493 RLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQAS 552
Query: 384 QTFKPPPPLRGGDA---SVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKR 439
+P A S ++ P P ++V S+I + T G+ +++F G
Sbjct: 553 MGLEPNAAYSQSSAFGTSFDNGRAAP--PRYMVTSALDSTIRLWETTTGRCLRTFF-GHL 609
Query: 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLA 499
EG + A I EDR + + ++GK E H V + R A
Sbjct: 610 EGVWALGADTLR----IVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLGDSR--FA 663
Query: 500 TYGEDCTMKLW 510
T EDC ++++
Sbjct: 664 TGSEDCEVRMY 674
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 31/98 (31%), Positives = 57/98 (58%)
Query: 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKLLKEFRGHS 348
W+ G+C + + H+ GV L F IL+T S+D+T +I ++G+ L+ RGH
Sbjct: 335 WKY--GRCSIKTFKGHTNGVMCLQFE---DNILATGSYDTTIKIWDTETGEELRTLRGHE 389
Query: 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
S + F D +++++ S D T+KVW+ ++ +C+ T+
Sbjct: 390 SGIRCLQF--DDTKLISGSMDRTIKVWNWRTGECISTY 425
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
+ + + D I++W +G+CLR H EGV +L D +I+S + D +I ++
Sbjct: 582 MVTSALDSTIRLWETTTGRCLRTFF-GHLEGVWAL--GADTLRIVSGAEDRMIKIWDPRT 638
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
GK + F GHS V I D SR T S DC V+++ +S
Sbjct: 639 GKCERTFTGHSGPVT-CIGLGD-SRFATGSEDCEVRMYSFQS 678
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 223 (83.6 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 66/215 (30%), Positives = 105/215 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+DG + +WD +G ++ F+ H + VL + FS D+ + S
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATG--------ESTRRFVGHTKDVLSVAFSTDNRQIVSA 123
Query: 282 SQDGKIKVWRIRSGQCLRRLERA--HSEGVTSLVFSRDG--SQILSTSFDSTARIHGLKS 337
S+D IK+W G+C + A H E V+ + FS + I+S S+D T ++ L++
Sbjct: 124 SRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
KL GHS Y+N + DGS + D + +WDL L + L G
Sbjct: 183 CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYS------LEAG-- 234
Query: 398 SVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQVV 431
S+ +H +P+ +C T +SI I L+ + V
Sbjct: 235 SI--IHSLCFSPNRYWLCAATENSIRIWDLESKSV 267
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 68/262 (25%), Positives = 114/262 (43%)
Query: 258 TFMMHDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRS-----GQCLRRLERAHSEGVTS 311
T H + V I D S+++ + S+D I +W++ G RR+ HS V
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT-GHSHFVQD 68
Query: 312 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371
+V S DG LS S+D R+ L +G+ + F GH+ V F+ D ++V+AS D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 372 VKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN--PDHIVVCNKTSSIYIMTLQGQ 429
+K+W+ +C T G V+ V P P IV + ++ + LQ
Sbjct: 129 IKLWNTLG-ECKYTISEAD---GHKEWVSCVRFSPNTLVPT-IVSASWDKTVKVWNLQNC 183
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-G 488
+++ +G G VSP G G+D + + GK L + +I
Sbjct: 184 KLRNTLAG--HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHS 239
Query: 489 VTHHPHRNLLATYGEDCTMKLW 510
+ P+R L E+ ++++W
Sbjct: 240 LCFSPNRYWLCAATEN-SIRIW 260
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 48/169 (28%), Positives = 84/169 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM--L 278
FS D + +VS S D I++W+ L G+ K + +AD H E V C+ FS ++ + +
Sbjct: 113 FSTDNRQIVSASRDRTIKLWNTL-GECKYTIS-EADG----HKEWVSCVRFSPNTLVPTI 166
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
S S D +KVW +++ + LR HS + ++ S DGS S D + L G
Sbjct: 167 VSASWDKTVKVWNLQNCK-LRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
K L S ++ F+ + + A+ + ++++WDL+S ++ K
Sbjct: 226 KKLYSLEA-GSIIHSLCFSPNRYWLCAATEN-SIRIWDLESKSVVEDLK 272
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/226 (24%), Positives = 101/226 (44%)
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSF-DSTARIHGL----KS-GKLLKEFRGHS 348
G L+ AH++ VT++ D S ++ TS D + + L KS G + GHS
Sbjct: 4 GLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHS 63
Query: 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 408
+V D + ++DG ++ S D +++WDL + + + F G V SV F +
Sbjct: 64 HFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFV------GHTKDVLSV-AFSTD 116
Query: 409 PDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKG--EWIYCVGEDRN 464
IV ++ +I + G+ ++ + +G +CV SP I D+
Sbjct: 117 NRQIVSASRDRTIKLWNTLGEC--KYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Query: 465 LYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ ++ Q+ KL + + H + V P +L A+ G+D + LW
Sbjct: 175 VKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 38/137 (27%), Positives = 67/137 (48%)
Query: 211 GTKSHAECARFSPDGQF--LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLC 268
G K C RFSP+ +VS S+D ++VW+ + KL+ T H +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRN--------TLAGHSGYLNT 198
Query: 269 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
+ S D + ASG +DG I +W + G+ L LE + SL FS + + + + ++
Sbjct: 199 VAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI--IHSLCFSPNRYWLCAAT-EN 255
Query: 329 TARIHGLKSGKLLKEFR 345
+ RI L+S ++++ +
Sbjct: 256 SIRIWDLESKSVVEDLK 272
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 235 (87.8 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 71/240 (29%), Positives = 120/240 (50%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPDG++LV+ + D I++WD + K++ Y F H++ + ++FS + + S
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVR----Y----VFSGHEQDIYSLDFSHNGRFIVS 419
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
GS D ++W + +GQC+ +LE + GVT++ S + I S D R+ + SG L
Sbjct: 420 GSGDRTARLWDVETGQCILKLEIEN--GVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTL 476
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC--LQTFKPPPPLR----G 394
++ GH V F+ D S +++ S D T+KVW+L++T L KP + G
Sbjct: 477 VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKG 453
V SV + P + + +K S+ LQ GQ S+ + + ++ C SP G
Sbjct: 537 HTDFVLSVAVSPDSRWGLSG-SKDRSMQFWDLQTGQ---SYLTCQGHKNSVISVCFSPDG 592
Score = 169 (64.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 53/182 (29%), Positives = 83/182 (45%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+K ++ SP+ QF+ S D I VW +SG L + L+ H E+V
Sbjct: 438 LKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWS-VSGTLVERLEG--------HKESVY 488
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRS------------GQCLRRLERAHSEGVTSLVFS 315
I FS DS +L SGS D IKVW +++ G C + H++ V S+ S
Sbjct: 489 SIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGIC-KATYTGHTDFVLSVAVS 547
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
D LS S D + + L++G+ +GH + V F+ DG + + S D ++W
Sbjct: 548 PDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Query: 376 DL 377
+
Sbjct: 608 SI 609
Score = 156 (60.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 51/242 (21%), Positives = 109/242 (45%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG-----VTSLVFSR 316
H V C++FS + + LA+G V+ +++G+ L L + V ++ FS
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCNQAA-NVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
DG +++ + D ++ L + K+ F GH + F+++G +V+ S D T ++WD
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 436
+++ C+ + + G V ++ + P N I V + I + ++ G +V+
Sbjct: 431 VETGQCILKLE----IENG---VTAIAISP-NDQFIAVGSLDQIIRVWSVSGTLVERLE- 481
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
G +E +A SP + D+ + + Q+ + L + + + T+ H +
Sbjct: 482 GHKESVYSIA--FSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD 539
Query: 497 LL 498
+
Sbjct: 540 FV 541
Score = 132 (51.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 54/215 (25%), Positives = 95/215 (44%)
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS------YVNDAIFTN 358
H V + FS +G + L+T + A + +++GK L S YV F+
Sbjct: 312 HPSVVCCVKFSNNG-KYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 418
DG +VT + D +K+WDL + F G + + S+ F N IV +
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFS------GHEQDIYSLD-FSHNGRFIVSGSGD 423
Query: 419 SSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLE 476
+ + ++ GQ + E G A +SP ++I VG D+ + +S SG L
Sbjct: 424 RTARLWDVETGQCILKLEI---ENG-VTAIAISPNDQFI-AVGSLDQIIRVWS-VSGTLV 477
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
++ H++ V + P ++L + D T+K+W+
Sbjct: 478 ERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWE 512
Score = 41 (19.5 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 59 ILPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGV 105
I Q+ +++ R ++D+YE+ + E E D + + R+ + +GV
Sbjct: 43 IQSQIQEIEAFRKTVDDMYEK-QKSIRETYEKDINK-LKRELEELGV 87
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 208 (78.3 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 51/142 (35%), Positives = 73/142 (51%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S E R + + +V+ S G I VWD + K+ + T M H + ++
Sbjct: 65 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR--------TLMGHKANICSLD 116
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E +ASGSQD IK+W IR C+ R R HS+ V L FS DG + S + D T
Sbjct: 117 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTV 175
Query: 331 RIHGLKSGKLLKEFRGHSSYVN 352
++ L +GK++ EF GH+ VN
Sbjct: 176 KLWDLTAGKMMSEFPGHTGPVN 197
Score = 173 (66.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V + + E++ +GSQ G I+VW + + + LR L H + SL F G +
Sbjct: 66 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPYGEFV 124
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
S S D+ ++ ++ + +RGHS V F+ DG + +A+ D TVK+WDL +
Sbjct: 125 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 184
Query: 382 CLQTFKPPPPLRGGDASVNSVHLFP 406
+ F P G VN V P
Sbjct: 185 MMSEF-P-----GHTGPVNVVEFHP 203
Score = 145 (56.1 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 255 ADETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV 313
A E + H V + + S +LA+G D ++ +W I C+ L H+ V S+
Sbjct: 16 AVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-GHTSPVESVR 74
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373
+ I++ S + R+ L++ K+L+ GH + + F G V + S D +K
Sbjct: 75 LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 134
Query: 374 VWDLKSTDCLQTFK 387
+WD++ C+ ++
Sbjct: 135 LWDIRRKGCVFRYR 148
Score = 131 (51.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 43/198 (21%), Positives = 83/198 (41%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AH+ V+SLV + ++L+T D + + + GH+S V
Sbjct: 22 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 81
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + ++ ++I
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRT------LMGHKANICSLDFHPYG-EFVASGSQDTNIK 134
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + + G C+ SP G+W+ +D + + +GK+
Sbjct: 135 LWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP 190
Query: 481 VHEKDVIGVTHHPHRNLL 498
H V V HP+ LL
Sbjct: 191 GHTGPVNVVEFHPNEYLL 208
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 39/172 (22%), Positives = 73/172 (42%)
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
++E H+S V+ + R++ T DC V +W + +C+ + L G + V
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS------LTGHTSPV 70
Query: 400 NSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC 458
SV L P+ ++V S SI + L+ + G + + + P GE++
Sbjct: 71 ESVRL--NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK--ANICSLDFHPYGEFVAS 126
Query: 459 VGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+D N+ + + + H + V + P LA+ +D T+KLW
Sbjct: 127 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 178
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 220 (82.5 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 68/234 (29%), Positives = 108/234 (46%)
Query: 214 SH-AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS 272
SH E S DGQF +S S+DG + +WD +G+ + F+ H + VL + FS
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTR--------RFVGHTKDVLSVAFS 114
Query: 273 RDSEMLASGSQDGKIKVWRIRSGQCLRRLERA--HSEGVTSLVFSRDG--SQILSTSFDS 328
D+ + S S+D IK+W G+C + H E V+ + FS + I+S S+D
Sbjct: 115 TDNRQIVSASRDRTIKLWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
T ++ L++ KL GHS Y+N + DGS + D + +WDL L + +
Sbjct: 174 TVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG 442
+ S N L + I + + S + L+ + KS + K EGG
Sbjct: 234 GSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDL-KS-EAEKNEGG 285
Score = 180 (68.4 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 68/258 (26%), Positives = 112/258 (43%)
Query: 262 HDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRS-----GQCLRRLERAHSEGVTSLVFS 315
H + V I D S+++ + S+D I +W++ G RRL HS V +V S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT-GHSHFVEDVVLS 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
DG LS S+D R+ L +G+ + F GH+ V F+ D ++V+AS D T+K+W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 376 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN--PDHIVVCNKTSSIYIMTLQGQVVKS 433
+ +C T G V+ V P P IV + ++ + LQ +++
Sbjct: 133 NTLG-ECKYTISEGD---GHKEWVSCVRFSPNTLVPT-IVSASWDKTVKVWNLQNCKLRN 187
Query: 434 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-GVTHH 492
G G VSP G G+D + + GK L + +I +
Sbjct: 188 SLVG--HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHSLCFS 243
Query: 493 PHRNLLATYGEDCTMKLW 510
P+R L E+ ++++W
Sbjct: 244 PNRYWLCAATEN-SIRIW 260
Score = 144 (55.7 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 60/226 (26%), Positives = 103/226 (45%)
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGL----KS-GKLLKEFRGHS 348
G L+ + RAH++ VT++ D S I+ T S D + + L KS G + GHS
Sbjct: 4 GLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHS 63
Query: 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 408
+V D + ++DG ++ S D +++WDL + + + F G V SV F +
Sbjct: 64 HFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFV------GHTKDVLSV-AFSTD 116
Query: 409 PDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKG--EWIYCVGEDRN 464
IV ++ +I + G+ + S G +G +CV SP I D+
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEG--DGHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Query: 465 LYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ ++ Q+ KL + + H + V P +L A+ G+D + LW
Sbjct: 175 VKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 224 (83.9 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 72/291 (24%), Positives = 124/291 (42%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FS + + L S S D + VW ++ + + Y+ F H + V C+ FS +LAS
Sbjct: 27 FSLNTKQLASGSMDSCLMVW-HMKPQTRA---YR----FAGHKDAVTCVNFSPSGHLLAS 78
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
GS+D +++W + + + + RAH+ V S+ F DG ++ S D T ++ K
Sbjct: 79 GSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKF 137
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
L H ++V A F+ DG +V+AS D TVK+WD S +C+ ++ GG V
Sbjct: 138 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE----HGG--FVT 191
Query: 401 SVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 460
V P I +++ + ++ + + A P G ++
Sbjct: 192 YVDFHPSGTC-IAAAGMDNTVKVWDVRTH--RLLQHYQLHSAAVNALSFHPSGNYLVTAS 248
Query: 461 EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
D L G+L + + H+ V A+ G D + +WK
Sbjct: 249 SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 220 (82.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 79/258 (30%), Positives = 117/258 (45%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + V ++FS +++ LASGS D + VW ++ R H + VT + FS G
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFA-GHKDAVTCVNFSPSG 73
Query: 319 SQILSTSFDSTARIH--GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ S S D T RI +K + FR H++ V F +DG VTAS D TVKVW
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTVKVW- 130
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD-HIVVC---NKTSSIYIMTLQGQVVK 432
ST Q F L +N V +PD ++V +KT ++ T + + V
Sbjct: 131 --STH-RQKF-----LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR-ECVH 181
Query: 433 SFSSGKREGGDFVAAC-VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491
S+ E G FV P G I G D + + ++ +L ++H V ++
Sbjct: 182 SYC----EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 237
Query: 492 HPHRNLLATYGEDCTMKL 509
HP N L T D T+K+
Sbjct: 238 HPSGNYLVTASSDSTLKI 255
Score = 213 (80.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 65/234 (27%), Positives = 105/234 (44%)
Query: 199 MYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADET 258
M P T ++ G K C FSP G L S S D + +W +K +
Sbjct: 48 MKPQTRAYRFA-GHKDAVTCVNFSPSGHLLASGSRDKTVRIW---VPNVKGE-----STV 98
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H TV + F D + + S D +KVW + L L + H V FS DG
Sbjct: 99 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCAKFSPDG 157
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
I+S S D T ++ S + + + H +V F G+ + A D TVKVWD++
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 379 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVV 431
+ LQ ++ L A+VN++ P +++V + S++ I+ L +G+++
Sbjct: 218 THRLLQHYQ----LHS--AAVNALSFHPSG-NYLVTASSDSTLKILDLMEGRLL 264
Score = 211 (79.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 48/158 (30%), Positives = 78/158 (49%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
CA+FSPDG+ +VS S D +++WD K ++ + ++ H V ++F
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWD----KTSRECVH----SYCEHGGFVTYVDFHPSGTC 201
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
+A+ D +KVW +R+ + L+ + HS V +L F G+ +++ S DST +I L
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQ-LHSAAVNALSFHPSGNYLVTASSDSTLKILDLME 260
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
G+LL GH F+ G + SD V VW
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 155 (59.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 56/214 (26%), Positives = 88/214 (41%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H + VTS+ FS + Q+ S S DS + +K F GH V F+
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G + + S D TV++W + + T R A+V SVH F + V +
Sbjct: 71 PSGHLLASGSRDKTVRIW-VPNVKGESTV-----FRAHTATVRSVH-FCSDGQSFVTASD 123
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476
++ + + Q F + ++V A SP G I +D+ + + S +
Sbjct: 124 DKTVKVWSTHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H H V V HP +A G D T+K+W
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 83/325 (25%), Positives = 143/325 (44%)
Query: 192 MKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDL 251
M +ED P L + K G K+ A FSP+ + + + S+D F+ +W LK
Sbjct: 1 MASGLED--PI-LERSFK-GHKAAITSADFSPNCKQIATASWDTFLMLWS-----LKPHA 51
Query: 252 Q-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI-RSGQCLRRLERAHSEGV 309
+ Y+ ++ H + V ++FS +LAS S+D +++W + R G+ +AH+ V
Sbjct: 52 RAYR----YVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEF--KAHTAPV 105
Query: 310 TSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369
S+ FS DG +++ S D + ++ + + L H+ +V A F+ DG +V+ S D
Sbjct: 106 RSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSED 165
Query: 370 CTVKVWDLKSTDCLQTFKPPPPLRGG-DASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG 428
T+K+WD + C+ F D + N + DH V K I + L
Sbjct: 166 KTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAV---KIWDIRMNKLL- 221
Query: 429 QVVKSFSSGKREGGDFVAACVS--PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDV 486
Q + S G C+S P G + D + G+L + ++ H V
Sbjct: 222 QHYQVHSCGVN--------CLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPV 273
Query: 487 IGVTHHPHRNLLATYGEDCTMKLWK 511
V+ LL + G D + +W+
Sbjct: 274 FTVSFSKDGELLTSGGADAQVLIWR 298
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 225 (84.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/261 (27%), Positives = 127/261 (48%)
Query: 251 LQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVT 310
+++ AD+ F ++V C+++ D E++ SGS+D + VW + S L +L HS V
Sbjct: 209 IRFPADQDFRATLDSVYCVQY--DDEIMVSGSKDRTVSVWDVNSRFILYKLY-GHSGSVL 265
Query: 311 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 370
L F R + ++S S DST I ++ + LK + GH+ V + + + ++++S D
Sbjct: 266 CLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN--YIISSSRDH 323
Query: 371 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQ 429
T +VW L +T + LRG ASVNSV K IV + ++ + G
Sbjct: 324 TARVWRLDATSPAEACMHV--LRGHLASVNSVQYSSKT-GLIVTASSDRTLRTWDITTGH 380
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGV 489
++ + +R G AC G++I D + F SGKL +++ HE D+I
Sbjct: 381 CIRIIHAHQR--G---IACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHE-DLIRT 434
Query: 490 THHPHRNLLATYGEDCTMKLW 510
+++ G D T+++W
Sbjct: 435 VRFNDEKIVSG-GYDGTVRIW 454
Score = 195 (73.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 80/303 (26%), Positives = 138/303 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C ++ D + +VS S D + VWD S + + Y+ H +VLC++F R +
Sbjct: 226 CVQY--DDEIMVSGSKDRTVSVWDVNS----RFILYK----LYGHSGSVLCLDFCRRRNL 275
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
L SGS D I +W ++ + L+ + H++ V +V S + I+S+S D TAR+ L +
Sbjct: 276 LVSGSSDSTIIIWDWQNRRPLK-VYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRLDA 332
Query: 338 GK----LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR 393
+ RGH + VN +++ +VTASSD T++ WD+ + C++ R
Sbjct: 333 TSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQ--R 390
Query: 394 G-GDASVNSVHLFPKNPDHIV-VCNKTSSIYIMTLQGQ--VVKS--FSSGKREGGDFVAA 447
G A N + + D + + +S + LQG ++++ F+ K G +
Sbjct: 391 GIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSGGYDGT 450
Query: 448 CVSPKGEWIYCVGEDRNLYCFSHQS--GKLEHLMKVHEKDVIGVTHHPHRNLLATY--GE 503
W + GE +C H S ++ L H + +I TH L+ + G
Sbjct: 451 VRI----WNFNTGEQ---HCVLHNSRNSRVFGLQFDHRR-IIACTHSSEI-LVWNFDDGL 501
Query: 504 DCT 506
DCT
Sbjct: 502 DCT 504
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/179 (25%), Positives = 81/179 (45%)
Query: 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
+G C F LVS S D I +WD+ + ++ L+ + H + VL +
Sbjct: 258 YGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQN---RRPLK-----VYFGHTDNVLGV 309
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQ----CLRRLERAHSEGVTSLVFSRDGSQILSTS 325
S + + S S+D +VWR+ + C+ L R H V S+ +S I++ S
Sbjct: 310 VVSEN--YIISSSRDHTARVWRLDATSPAEACMHVL-RGHLASVNSVQYSSKTGLIVTAS 366
Query: 326 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
D T R + +G ++ H + A + +G +V+ SSD T+++++ S L+
Sbjct: 367 SDRTLRTWDITTGHCIRIIHAHQRGIACAQY--NGKFIVSGSSDLTIRIFEASSGKLLR 423
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 224 (83.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 77/306 (25%), Positives = 134/306 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ-YQADETFMMHDETVLCI 269
G K+ A FSP+ + + + S+D F+ +W LK + Y+ ++ H + V +
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWS-----LKPHARAYR----YVGHKDVVTSL 66
Query: 270 EFSRDSEMLASGSQDGKIKVWRI-RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
+FS +LAS S+D +++W + R G+ +AH+ V S+ FS DG +++ S D
Sbjct: 67 QFSPQGNLLASASRDKTVRLWVLDRKGKSSEF--KAHTAPVRSVDFSADGQFLVTASEDK 124
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
+ ++ + + L H+ +V A F+ DG +V+ S D T+K+WD S C+ F
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSD 184
Query: 389 PPPLRGG-DASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
D S N + DH V + I + L Q + S G
Sbjct: 185 SVGFANFVDFSPNGTCIASAGSDHAV---RIWDIRMNRLL-QHYQVHSCGVN-------- 232
Query: 448 CVS--PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 505
C+S P G + D + G+L + ++ H V V+ L + G D
Sbjct: 233 CLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADA 292
Query: 506 TMKLWK 511
+ +W+
Sbjct: 293 QVLVWR 298
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 76/255 (29%), Positives = 115/255 (45%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + +FS + + +A+ S D + +W ++ R H + VTSL FS G
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQG 72
Query: 319 SQILSTSFDSTARIHGL-KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ + S S D T R+ L + GK EF+ H++ V F+ DG +VTAS D ++KVW +
Sbjct: 73 NLLASASRDKTVRLWVLDRKGKS-SEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH--IVVCNKTSSIYIM-TLQGQVVKSF 434
Q F L + V +PD IV C++ +I I T Q V +F
Sbjct: 132 YR----QRF-----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S +FV SP G I G D + + + +L +VH V ++ HP
Sbjct: 183 SDSVGFA-NFVD--FSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPS 239
Query: 495 RNLLATYGEDCTMKL 509
N L T D T+K+
Sbjct: 240 GNSLVTASSDGTVKI 254
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 54/217 (24%), Positives = 89/217 (41%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L R + H +TS FS + QI + S+D+ + LK + GH V F+
Sbjct: 10 LERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417
G+ + +AS D TV++W L FK A V SV F + +V ++
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGKSSEFK------AHTAPVRSVD-FSADGQFLVTASE 122
Query: 418 TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
SI + ++ Q + S R A SP G I ED+ + + S + +
Sbjct: 123 DKSIKVWSMYRQ--RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVN 180
Query: 478 LMKVHEKDVIG----VTHHPHRNLLATYGEDCTMKLW 510
+ D +G V P+ +A+ G D +++W
Sbjct: 181 ----NFSDSVGFANFVDFSPNGTCIASAGSDHAVRIW 213
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 33/102 (32%), Positives = 46/102 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C F P G LV+ S DG +++ D + G+L LQ H V + FS+D E+
Sbjct: 233 CLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQG--------HTGPVFTVSFSKDGEL 284
Query: 278 LASGSQDGKIKVWRIRSGQC------LRRLERAHSEGVTSLV 313
SG D ++ VWR Q R L+R H E L+
Sbjct: 285 FTSGGADAQVLVWRTSFNQVHYRDPSKRNLKRLHLEASPHLL 326
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 224 (83.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 83/305 (27%), Positives = 131/305 (42%)
Query: 215 HAECA---RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 271
HAE FSPDG L S S D + +WD L + + T H + VLC+ +
Sbjct: 118 HAEAVVSLNFSPDGAHLASGSGDTTVRLWD-----LNTETPHF---TCTGHKQWVLCVSW 169
Query: 272 SRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV---FSRDGS--QILSTSF 326
+ D + LASG + G I +W +GQ R H + + L + RD ++ S S
Sbjct: 170 APDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASG 229
Query: 327 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
D RI +K G+ L GH++ V A+ + T+S D TVK+W +TF
Sbjct: 230 DGDCRIWDVKLGQCLMNIAGHTNAVT-AVRWGGAGLIYTSSKDRTVKMWRAADGILCRTF 288
Query: 387 KPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 446
A +++ ++ P H V S + + T + Q S+ KR + A
Sbjct: 289 SGHAHWVNNIA-LSTDYVLRTGPFHPVKDRSKSHLSLSTEELQE----SALKR----YQA 339
Query: 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 506
C + C +D LY + + K M H+ V V + P L+A+ D +
Sbjct: 340 VCPDEVESLVSC-SDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKS 398
Query: 507 MKLWK 511
++LW+
Sbjct: 399 VRLWR 403
Score = 195 (73.7 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 48/154 (31%), Positives = 80/154 (51%)
Query: 223 PDG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
PD + LVSCS D + +W ++ Q + E H V +++S D +++AS
Sbjct: 342 PDEVESLVSCSDDNTLYLW--------RNNQNKCVERMTGHQNVVNDVKYSPDVKLIASA 393
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++WR GQ + R H + V ++ +S D I+S S DST ++ +++ KL
Sbjct: 394 SFDKSVRLWRASDGQYMATF-RGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLA 452
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
+E GH+ V + DGSRV + D +K+W
Sbjct: 453 QELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 181 (68.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 77/315 (24%), Positives = 133/315 (42%)
Query: 202 TTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261
T H G K C ++PDG+ L S G I +WD +G+ Q
Sbjct: 150 TETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQ-------QKGRPLSG 202
Query: 262 HDETVLCIE---FSRDSEM--LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
H + + C+ + RD E LAS S DG ++W ++ GQCL + H+ VT++ +
Sbjct: 203 HKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIA-GHTNAVTAVRWGG 261
Query: 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
G I ++S D T ++ G L + F GH+ +VN+ + D V+ VK
Sbjct: 262 AGL-IYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTD--YVLRTGPFHPVKDRS 318
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFS 435
KS L T + L+ A + P + +V C+ +++Y+ Q + V+ +
Sbjct: 319 -KSHLSLSTEE----LQES-ALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMT 372
Query: 436 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 495
+ D SP + I D+++ + G+ + H + V V
Sbjct: 373 GHQNVVNDVK---YSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADS 429
Query: 496 NLLATYGEDCTMKLW 510
L+ + +D T+K+W
Sbjct: 430 RLIVSGSKDSTLKVW 444
Score = 157 (60.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 276 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 335
E L S S D + +WR +C+ R+ H V + +S D I S SFD + R+
Sbjct: 346 ESLVSCSDDNTLYLWRNNQNKCVERMT-GHQNVVNDVKYSPDVKLIASASFDKSVRLWRA 404
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
G+ + FRGH V ++ D +V+ S D T+KVW +++ Q
Sbjct: 405 SDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQ 453
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 230 (86.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 89/305 (29%), Positives = 139/305 (45%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278
A FS D Q + SC D ++V+ SG+ + L+ A HD+ +LC FS D + +
Sbjct: 620 ACFSRDRQRIASCGADKTLQVFKAESGE--RLLEISA------HDDEILCCTFSADDKYV 671
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS-RDGSQILSTSFDST-ARIHGLK 336
A+ S D K+K+W R+G+CL E H+E V F+ R G +L+T D T ++ LK
Sbjct: 672 ATCSADKKVKIWNSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLK 730
Query: 337 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 396
GH + V+ F+ + + + S+D TVK+W++ S + L+T + R D
Sbjct: 731 DKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNAD 790
Query: 397 ASVNSVHLFPK------NPDHIVVC--NKTSSIYIMT--LQGQVVKSFSSGKREGGDFVA 446
+ V + K + D I+V NK + T L QV+ S S + DF A
Sbjct: 791 EQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHS-TIQYCDFCA 849
Query: 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 506
+C E N+ S + H VH VT +L T ED T
Sbjct: 850 GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVH-----CVTFSSDGSLFLTSSEDQT 904
Query: 507 MKLWK 511
+++W+
Sbjct: 905 IRIWE 909
Score = 198 (74.8 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 55/190 (28%), Positives = 89/190 (46%)
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM--HDETVLCIE 270
++ + RF+ D Q L+S + D I+VW++ Q +E + H E +
Sbjct: 1005 RTSVQHCRFTTDCQTLISSAHDAVIQVWNW-----------QLNECVFLKGHKEAIKDFA 1053
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F +S++L S S DG +KVW I +G+ + H V S S DGS+ STS D TA
Sbjct: 1054 FLENSKLL-SWSFDGTVKVWNITTGKTEKDFA-CHRGAVLSCAVSPDGSRFSSTSADKTA 1111
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ-----T 385
+I +S +L E +GH + V + F+ + T +++WD+ + + L T
Sbjct: 1112 KIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVT 1171
Query: 386 FKPPPPLRGG 395
P GG
Sbjct: 1172 VDEEEPTHGG 1181
Score = 197 (74.4 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 60/242 (24%), Positives = 123/242 (50%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWD-YLSGKLK----K 249
D++D Y +T+ FG + RFSP+ ++ SCS DG +++W+ + + +L+ K
Sbjct: 728 DLKDKY---CRNTM-FGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIK 783
Query: 250 DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGV 309
D ADE + V C +SR S+ + +++ K+ ++ + + L ++ +H +
Sbjct: 784 DFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKN-KLLLFDVTTSNLLTQVIISHHSTI 842
Query: 310 TSLVFSRDGSQILSTSFDSTA-RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368
F G ++++ + + + +KS + + RGH+S+V+ F++DGS +T+S
Sbjct: 843 QYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSE 901
Query: 369 DCTVKVWDL----KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYI 423
D T+++W+ KS+D + + G+ + +++ N HI + N T SI +
Sbjct: 902 DQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIY----NQKHIQLINGNTDSIIM 957
Query: 424 MT 425
T
Sbjct: 958 QT 959
Score = 188 (71.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 55/191 (28%), Positives = 87/191 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C S D +F +G I+V L G++ + A T + H C F+ D +
Sbjct: 968 CCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE--AYRTSVQH-----C-RFTTDCQT 1019
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
L S + D I+VW + +C+ + H E + F + S++LS SFD T ++ + +
Sbjct: 1020 LISSAHDAVIQVWNWQLNECV--FLKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNITT 1076
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
GK K+F H V + DGSR + S+D T K+W +S+ L L+G +A
Sbjct: 1077 GKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHE------LKGHEA 1130
Query: 398 SVNSVHLFPKN 408
V P N
Sbjct: 1131 CVRCSAFSPSN 1141
Score = 180 (68.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 72/284 (25%), Positives = 116/284 (40%)
Query: 242 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 301
YL KK L+ + H + V FSRD + +AS D ++V++ SG+ L +
Sbjct: 593 YLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEI 652
Query: 302 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 361
AH + + FS D + + S D +I ++GK L + H+ VN F N
Sbjct: 653 S-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRG 711
Query: 362 R--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV-HL-FPKNPDHIVVCNK 417
+ + T S D +K+WDLK C T + G VN+V H F N D+I C+
Sbjct: 712 QYLLATCSDDTYIKLWDLKDKYCRNT------MFG---HVNAVSHCRFSPNDDYIASCST 762
Query: 418 TSSIYIMTLQGQ------VVKSFSSGKREGGDFVAACV-----SPKGEWIYCVGEDRNLY 466
++ + + +K F E D V V S + I V +++ L
Sbjct: 763 DGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLL 822
Query: 467 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
S L ++ H + L+A C+++LW
Sbjct: 823 FDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELW 866
Score = 177 (67.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 66/224 (29%), Positives = 101/224 (45%)
Query: 213 KSHAECAR-FS-PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
K H E + F+ + L+S SFDG ++VW+ +GK +KD F H VL
Sbjct: 1043 KGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKD--------FACHRGAVLSCA 1094
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS-T 329
S D +S S D K+W S L L + H V FS +++L+T D
Sbjct: 1095 VSPDGSRFSSTSADKTAKIWSFESSSVLHEL-KGHEACVRCSAFS-PSNKLLATGDDKGD 1152
Query: 330 ARIHGLKSGKLL---------KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
RI + +G+LL +E H +V D F+ D +V SS +K WD+ +
Sbjct: 1153 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV--SSGGYLKWWDVTTG 1210
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 424
+ LQTF G ++ S+H+ P N D V + +Y++
Sbjct: 1211 ESLQTF-----YTNG-TNLKSIHVSP-NFDVYVTVDNLGILYVL 1247
Score = 138 (53.6 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RDS 275
C FS D +++ +CS D +++W+ +GK Y +E H E V C +F+ R
Sbjct: 661 CCTFSADDKYVATCSADKKVKIWNSRTGKCL----YVYEE----HTEQVNCCQFNNRRGQ 712
Query: 276 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 335
+LA+ S D IK+W ++ C R H V+ FS + I S S D T ++ +
Sbjct: 713 YLLATCSDDTYIKLWDLKDKYC-RNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNV 771
Query: 336 KSGKLLK 342
S L+
Sbjct: 772 HSANELR 778
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 178 PPGTQFDLFRGTAAMKQ-DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGF 236
P G++F T+A K + +++ H +K G ++ C+ FSP + L + G
Sbjct: 1097 PDGSRFS---STSADKTAKIWSFESSSVLHELK-GHEACVRCSAFSPSNKLLATGDDKGD 1152
Query: 237 IEVWDYLSGKLKKDLQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG 295
I +WD L+G+L DE H V + FS DS+ML S G +K W + +G
Sbjct: 1153 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG--GYLKWWDVTTG 1210
Query: 296 QCLR 299
+ L+
Sbjct: 1211 ESLQ 1214
Score = 123 (48.4 bits), Expect = 0.00074, P = 0.00074
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
+ + C S D + A G ++G IKV R+ G+ L E A+ V F+ D ++
Sbjct: 963 ESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE-AYRTSVQHCRFTTDCQTLI 1021
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
S++ D+ ++ + + + +GH + D F + S++++ S D TVKVW++
Sbjct: 1022 SSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNI 1074
Score = 113 (44.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 40/177 (22%), Positives = 78/177 (44%)
Query: 335 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
L G++L + + V FT D +++++ D ++VW+ + +C+ F L+G
Sbjct: 992 LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV--F-----LKG 1044
Query: 395 GDASVNSVHLFPKNPDHIVVC-NKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
++ F +N + + T ++ +T G+ K F+ + G ++ VSP G
Sbjct: 1045 HKEAIKDF-AFLENSKLLSWSFDGTVKVWNITT-GKTEKDFACHR---GAVLSCAVSPDG 1099
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
D+ +S +S + H +K HE V P LLAT + +++W
Sbjct: 1100 SRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1156
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 230 (86.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 89/305 (29%), Positives = 139/305 (45%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278
A FS D Q + SC D ++V+ SG+ + L+ A HD+ +LC FS D + +
Sbjct: 621 ACFSRDRQRIASCGADKTLQVFKAESGE--RLLEISA------HDDEILCCTFSADDKYV 672
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS-RDGSQILSTSFDST-ARIHGLK 336
A+ S D K+K+W R+G+CL E H+E V F+ R G +L+T D T ++ LK
Sbjct: 673 ATCSADKKVKIWNSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLK 731
Query: 337 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 396
GH + V+ F+ + + + S+D TVK+W++ S + L+T + R D
Sbjct: 732 DKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNAD 791
Query: 397 ASVNSVHLFPK------NPDHIVVC--NKTSSIYIMT--LQGQVVKSFSSGKREGGDFVA 446
+ V + K + D I+V NK + T L QV+ S S + DF A
Sbjct: 792 EQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHS-TIQYCDFCA 850
Query: 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 506
+C E N+ S + H VH VT +L T ED T
Sbjct: 851 GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVH-----CVTFSSDGSLFLTSSEDQT 905
Query: 507 MKLWK 511
+++W+
Sbjct: 906 IRIWE 910
Score = 198 (74.8 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 55/190 (28%), Positives = 89/190 (46%)
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM--HDETVLCIE 270
++ + RF+ D Q L+S + D I+VW++ Q +E + H E +
Sbjct: 1006 RTSVQHCRFTTDCQTLISSAHDAVIQVWNW-----------QLNECVFLKGHKEAIKDFA 1054
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F +S++L S S DG +KVW I +G+ + H V S S DGS+ STS D TA
Sbjct: 1055 FLENSKLL-SWSFDGTVKVWNITTGKTEKDFA-CHRGAVLSCAVSPDGSRFSSTSADKTA 1112
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ-----T 385
+I +S +L E +GH + V + F+ + T +++WD+ + + L T
Sbjct: 1113 KIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVT 1172
Query: 386 FKPPPPLRGG 395
P GG
Sbjct: 1173 VDEEEPTHGG 1182
Score = 197 (74.4 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 60/242 (24%), Positives = 123/242 (50%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWD-YLSGKLK----K 249
D++D Y +T+ FG + RFSP+ ++ SCS DG +++W+ + + +L+ K
Sbjct: 729 DLKDKY---CRNTM-FGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIK 784
Query: 250 DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGV 309
D ADE + V C +SR S+ + +++ K+ ++ + + L ++ +H +
Sbjct: 785 DFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKN-KLLLFDVTTSNLLTQVIISHHSTI 843
Query: 310 TSLVFSRDGSQILSTSFDSTA-RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368
F G ++++ + + + +KS + + RGH+S+V+ F++DGS +T+S
Sbjct: 844 QYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSE 902
Query: 369 DCTVKVWDL----KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYI 423
D T+++W+ KS+D + + G+ + +++ N HI + N T SI +
Sbjct: 903 DQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIY----NQKHIQLINGNTDSIIM 958
Query: 424 MT 425
T
Sbjct: 959 QT 960
Score = 188 (71.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 55/191 (28%), Positives = 87/191 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C S D +F +G I+V L G++ + A T + H C F+ D +
Sbjct: 969 CCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE--AYRTSVQH-----C-RFTTDCQT 1020
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
L S + D I+VW + +C+ + H E + F + S++LS SFD T ++ + +
Sbjct: 1021 LISSAHDAVIQVWNWQLNECV--FLKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNITT 1077
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
GK K+F H V + DGSR + S+D T K+W +S+ L L+G +A
Sbjct: 1078 GKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHE------LKGHEA 1131
Query: 398 SVNSVHLFPKN 408
V P N
Sbjct: 1132 CVRCSAFSPSN 1142
Score = 180 (68.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 72/284 (25%), Positives = 116/284 (40%)
Query: 242 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 301
YL KK L+ + H + V FSRD + +AS D ++V++ SG+ L +
Sbjct: 594 YLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEI 653
Query: 302 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 361
AH + + FS D + + S D +I ++GK L + H+ VN F N
Sbjct: 654 S-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRG 712
Query: 362 R--VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV-HL-FPKNPDHIVVCNK 417
+ + T S D +K+WDLK C T + G VN+V H F N D+I C+
Sbjct: 713 QYLLATCSDDTYIKLWDLKDKYCRNT------MFG---HVNAVSHCRFSPNDDYIASCST 763
Query: 418 TSSIYIMTLQGQ------VVKSFSSGKREGGDFVAACV-----SPKGEWIYCVGEDRNLY 466
++ + + +K F E D V V S + I V +++ L
Sbjct: 764 DGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLL 823
Query: 467 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
S L ++ H + L+A C+++LW
Sbjct: 824 FDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELW 867
Score = 178 (67.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 66/226 (29%), Positives = 102/226 (45%)
Query: 213 KSHAECAR-FS-PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
K H E + F+ + L+S SFDG ++VW+ +GK +KD F H VL
Sbjct: 1044 KGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKD--------FACHRGAVLSCA 1095
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS-T 329
S D +S S D K+W S L L + H V FS +++L+T D
Sbjct: 1096 VSPDGSRFSSTSADKTAKIWSFESSSVLHEL-KGHEACVRCSAFS-PSNKLLATGDDKGD 1153
Query: 330 ARIHGLKSGKLL---------KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
RI + +G+LL +E H +V D F+ D +V SS +K WD+ +
Sbjct: 1154 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV--SSGGYLKWWDVTTG 1211
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426
+ LQTF G ++ S+H+ P N D V + +Y++ +
Sbjct: 1212 ESLQTF-----YTNG-TNLKSIHVSP-NFDVYVTVDNLGILYVLQI 1250
Score = 138 (53.6 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RDS 275
C FS D +++ +CS D +++W+ +GK Y +E H E V C +F+ R
Sbjct: 662 CCTFSADDKYVATCSADKKVKIWNSRTGKCL----YVYEE----HTEQVNCCQFNNRRGQ 713
Query: 276 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 335
+LA+ S D IK+W ++ C R H V+ FS + I S S D T ++ +
Sbjct: 714 YLLATCSDDTYIKLWDLKDKYC-RNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNV 772
Query: 336 KSGKLLK 342
S L+
Sbjct: 773 HSANELR 779
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 178 PPGTQFDLFRGTAAMKQ-DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGF 236
P G++F T+A K + +++ H +K G ++ C+ FSP + L + G
Sbjct: 1098 PDGSRFS---STSADKTAKIWSFESSSVLHELK-GHEACVRCSAFSPSNKLLATGDDKGD 1153
Query: 237 IEVWDYLSGKLKKDLQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG 295
I +WD L+G+L DE H V + FS DS+ML S G +K W + +G
Sbjct: 1154 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG--GYLKWWDVTTG 1211
Query: 296 QCLR 299
+ L+
Sbjct: 1212 ESLQ 1215
Score = 123 (48.4 bits), Expect = 0.00074, P = 0.00074
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
+ + C S D + A G ++G IKV R+ G+ L E A+ V F+ D ++
Sbjct: 964 ESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE-AYRTSVQHCRFTTDCQTLI 1022
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
S++ D+ ++ + + + +GH + D F + S++++ S D TVKVW++
Sbjct: 1023 SSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNI 1075
Score = 113 (44.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 40/177 (22%), Positives = 78/177 (44%)
Query: 335 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
L G++L + + V FT D +++++ D ++VW+ + +C+ F L+G
Sbjct: 993 LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV--F-----LKG 1045
Query: 395 GDASVNSVHLFPKNPDHIVVC-NKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
++ F +N + + T ++ +T G+ K F+ + G ++ VSP G
Sbjct: 1046 HKEAIKDF-AFLENSKLLSWSFDGTVKVWNITT-GKTEKDFACHR---GAVLSCAVSPDG 1100
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
D+ +S +S + H +K HE V P LLAT + +++W
Sbjct: 1101 SRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1157
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 210 (79.0 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 55/178 (30%), Positives = 88/178 (49%)
Query: 209 KFGTKSH-AECAR--FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265
KF H A R F P +VS S D I +WD+ +G+ ++ L+ H ++
Sbjct: 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKG--------HTDS 152
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRLERAHSEGVTSLVFSRDGSQILST 324
V + F ++LAS S D IK+W + S +C++ + H V+S+ F G +LS
Sbjct: 153 VQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMH-GHDHNVSSVAFVPAGDYVLSA 211
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
S D T ++ + +G +K + GH +V +GS T S+D T++VW S DC
Sbjct: 212 SRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC 269
Score = 157 (60.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 33/126 (26%), Positives = 65/126 (51%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H ++ + F ++ S S+D I++W +G+ R L + H++ V + F G +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSL-KGHTDSVQDVAFDAQGKLL 165
Query: 322 LSTSFDSTARIHGLK-SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
S S D + ++ + S + +K GH V+ F G V++AS D T+K+W++ +
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 381 DCLQTF 386
C++T+
Sbjct: 226 YCVKTY 231
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 49/194 (25%), Positives = 79/194 (40%)
Query: 199 MYPTTLSHTIKF--GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLK---KDLQY 253
M+ + +K G + R +G +CS D I VW S K +D ++
Sbjct: 219 MWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEH 278
Query: 254 QADETFMMHDETVLCIEFSRDSE---------MLASGSQDGKIKVWRIRSGQCLRRLERA 304
+ + I + ++ LASGS+D I++W + G CL L
Sbjct: 279 TVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLS-G 337
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364
H V L F G ++S S D T R+ L++ + +K H + F V+
Sbjct: 338 HDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVI 397
Query: 365 TASSDCTVKVWDLK 378
+ S D TVKVW+ +
Sbjct: 398 SGSVDQTVKVWECR 411
Score = 144 (55.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 46/186 (24%), Positives = 81/186 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM--HDETVLC 268
G + F P G +++S S D I++W+ +G K + M+ H E +
Sbjct: 191 GHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIF 250
Query: 269 IEFSRDSEMLA--SGSQDGKIKVW-RIRSGQCLRRLERAHSEGVTSLVFS------RDGS 319
S D + + S+D K+++ + +C+ A + + + G
Sbjct: 251 ATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGP 310
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+ S S D T RI + G L GH ++V F G +V+AS D T++VWDL++
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN 370
Query: 380 TDCLQT 385
C++T
Sbjct: 371 KRCMKT 376
Score = 52 (23.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 452 KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+G ++ D+ + + G + H+ V G+ HP L + +D T+++W
Sbjct: 308 QGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Score = 48 (22.0 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 9/61 (14%), Positives = 27/61 (44%)
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
P G+++ +D+ + + ++ + + H+ + H + + D T+K+W
Sbjct: 349 PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Query: 511 K 511
+
Sbjct: 409 E 409
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278
A+FSP G + SCS D +W +++ L+ A H V C+++ + +
Sbjct: 466 AQFSPFGHYFASCSHDRTARIWSM--DRIQP-LRIMAG-----HLSDVDCVQWHPNCNYI 517
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
A+GS D +++W +++G+C+R + H V SL S DG + S D T + L +
Sbjct: 518 ATGSSDKTVRLWDVQTGECVR-IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA 576
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
+ + GH+S V ++ +GS + + S+DCTVK+WD+ S+ L + G
Sbjct: 577 RCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEK---NGNSNR 633
Query: 399 VNSVHLFP--KNPDHIVVCNKTSSIY 422
+ S+ FP P H + ++ + ++
Sbjct: 634 LRSLRTFPTKSTPVHALRFSRRNLLF 659
Score = 180 (68.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 76/277 (27%), Positives = 122/277 (44%)
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR------SG----------QCL--- 298
TF+ + C S D ++A G D IKVW + SG Q +
Sbjct: 347 TFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPN 406
Query: 299 -RR---LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDA 354
RR L HS V S FS G +LS+S D+T R+ K L ++GH+ V DA
Sbjct: 407 GRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDA 466
Query: 355 IFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 414
F+ G + S D T ++W S D +Q P + G + V+ V P N ++I
Sbjct: 467 QFSPFGHYFASCSHDRTARIW---SMDRIQ---PLRIMAGHLSDVDCVQWHP-NCNYIAT 519
Query: 415 CNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG 473
+ ++ + +Q G+ V+ F G R ++ +SP G ++ ED + + +
Sbjct: 520 GSSDKTVRLWDVQTGECVRIFI-GHRSM--VLSLAMSPDGRYMASGDEDGTIMMWDLSTA 576
Query: 474 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ + H V +++ +LLA+ DCT+KLW
Sbjct: 577 RCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 55/202 (27%), Positives = 88/202 (43%)
Query: 201 PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYL------SGKLK--KDLQ 252
P+ +T T + C+ S DG + D I+VWD SG L+ D
Sbjct: 341 PSVSFYTF-VNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSS 399
Query: 253 YQA-------DETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA 304
Q+ T ++ H V FS + + S S D I++W + L +
Sbjct: 400 DQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLV-CYKG 458
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364
H+ V FS G S S D TARI + + L+ GH S V+ + + + +
Sbjct: 459 HNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIA 518
Query: 365 TASSDCTVKVWDLKSTDCLQTF 386
T SSD TV++WD+++ +C++ F
Sbjct: 519 TGSSDKTVRLWDVQTGECVRIF 540
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 215 (80.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 72/273 (26%), Positives = 124/273 (45%)
Query: 207 TIKFGTKSHAECAR---FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263
T K H++ S DG F +S S+D + +WD G+ + +F+ H
Sbjct: 63 TAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIR--------SFIGHT 114
Query: 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ-- 320
V + FS D+ + S S+D IK+W + QC + ++ H++ +T + FS +Q
Sbjct: 115 SDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTITDQQHTDWITCVRFSPSPNQAI 173
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S +D ++ LK+ L K GH+ +N + DGS + D K+WD+K
Sbjct: 174 IVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEG 233
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS-IYIMTLQGQVVKSFSSGKR 439
L + L G +++NS+ F +P +C T I I L+ +++ S +
Sbjct: 234 KHLYS------LETG-STINSL-CF--SPCDYWLCAATDRFIRIWNLESKLIISEIYPVK 283
Query: 440 EGGDFVAACVS----PKGEWIYCVGEDRNLYCF 468
+ V C S G+ +YC D N+Y +
Sbjct: 284 QSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Score = 159 (61.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 60/235 (25%), Positives = 99/235 (42%)
Query: 262 HDETVLCIEFSRDSEM--LASGSQDGKIKVWRIR----SGQC--LRRLERAHSEGVTSLV 313
H + V + D ++ + S S+D K+ VW I SG+ ++ HS+ + +
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS 79
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373
S DG LS S+D + R+ L G+ ++ F GH+S V F+ D ++V+AS D T+K
Sbjct: 80 ISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIK 139
Query: 374 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK-NPDHIVVCNKTSSIYIMTLQGQVVK 432
+W+ + C T + D + V P N IV C + + L+ +
Sbjct: 140 LWNTLA-QCKYTITDQ---QHTDW-ITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 433 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 487
G G +SP G G+D + + GK HL + I
Sbjct: 195 KNLEGHT--GVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK--HLYSLETGSTI 245
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 301 LERAHSEGVTSLVFSRDGS--QILSTSFDSTARIHGLK----SGKL---LKEFRGHSSYV 351
LE HS+ VTS+ D I+S S D + + SG++ K GHS +
Sbjct: 16 LEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
ND ++DG ++ S D +V++WDL + +++F G + V SV P N
Sbjct: 76 NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFI------GHTSDVFSVSFSPDNRQ- 128
Query: 412 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV----SPKGEWIYCVGEDRNLYC 467
IV ++ +I + Q ++ ++ D++ CV SP I G D+ +
Sbjct: 129 IVSASRDKTIKLWNTLAQC--KYTITDQQHTDWIT-CVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ ++ L ++ H + VT P +L A+ G+D KLW
Sbjct: 186 WNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 215 (80.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 72/273 (26%), Positives = 124/273 (45%)
Query: 207 TIKFGTKSHAECAR---FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263
T K H++ S DG F +S S+D + +WD G+ + +F+ H
Sbjct: 63 TAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIR--------SFIGHT 114
Query: 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ-- 320
V + FS D+ + S S+D IK+W + QC + ++ H++ +T + FS +Q
Sbjct: 115 SDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTITDQQHTDWITCVRFSPSPNQAI 173
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S +D ++ LK+ L K GH+ +N + DGS + D K+WD+K
Sbjct: 174 IVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEG 233
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS-IYIMTLQGQVVKSFSSGKR 439
L + L G +++NS+ F +P +C T I I L+ +++ S +
Sbjct: 234 KHLYS------LETG-STINSL-CF--SPCDYWLCAATDRFIRIWNLESKLIISEIYPVK 283
Query: 440 EGGDFVAACVS----PKGEWIYCVGEDRNLYCF 468
+ V C S G+ +YC D N+Y +
Sbjct: 284 QSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Score = 159 (61.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 60/235 (25%), Positives = 99/235 (42%)
Query: 262 HDETVLCIEFSRDSEM--LASGSQDGKIKVWRIR----SGQC--LRRLERAHSEGVTSLV 313
H + V + D ++ + S S+D K+ VW I SG+ ++ HS+ + +
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS 79
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373
S DG LS S+D + R+ L G+ ++ F GH+S V F+ D ++V+AS D T+K
Sbjct: 80 ISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIK 139
Query: 374 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK-NPDHIVVCNKTSSIYIMTLQGQVVK 432
+W+ + C T + D + V P N IV C + + L+ +
Sbjct: 140 LWNTLA-QCKYTITDQ---QHTDW-ITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 433 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 487
G G +SP G G+D + + GK HL + I
Sbjct: 195 KNLEGHT--GVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK--HLYSLETGSTI 245
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 301 LERAHSEGVTSLVFSRDGS--QILSTSFDSTARIHGLK----SGKL---LKEFRGHSSYV 351
LE HS+ VTS+ D I+S S D + + SG++ K GHS +
Sbjct: 16 LEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
ND ++DG ++ S D +V++WDL + +++F G + V SV P N
Sbjct: 76 NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFI------GHTSDVFSVSFSPDNRQ- 128
Query: 412 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV----SPKGEWIYCVGEDRNLYC 467
IV ++ +I + Q ++ ++ D++ CV SP I G D+ +
Sbjct: 129 IVSASRDKTIKLWNTLAQC--KYTITDQQHTDWIT-CVRFSPSPNQAIIVSCGWDKLVKV 185
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ ++ L ++ H + VT P +L A+ G+D KLW
Sbjct: 186 WNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 223 (83.6 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 53/161 (32%), Positives = 79/161 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SP + S S D +W + D Y + H V C++F +S LA+G
Sbjct: 389 SPHSLYFASASHDRTARLWSF-------DRTYPL-RIYAGHLADVDCVKFHPNSNYLATG 440
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++W + G +R L H V SL FS +G + S D ++ L SG L
Sbjct: 441 STDKTVRLWSTQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 499
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
KE RGH+ + F+ D S V +AS D +V+VWD++S+ C
Sbjct: 500 KELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHC 540
Score = 179 (68.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 44/155 (28%), Positives = 76/155 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + +C +F P+ +L + S D + +W G + F H VL +
Sbjct: 420 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVR--------LFTGHRGPVLSLA 471
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D S + S S D++
Sbjct: 472 FSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSSLVASASMDNSV 530
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365
R+ ++S G SS + ++T S V++
Sbjct: 531 RVWDIRSSHCSTPADGSSSELV-GVYTGQMSNVLS 564
Score = 165 (63.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 303 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 335 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLY 394
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+AS D T ++W T L+ + G A V+ V P N +++ + ++
Sbjct: 395 FASASHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDKTVR 447
Query: 423 IM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV 481
+ T QG V+ F+ G R G ++ SP G+++ GED+ L + SG L ++
Sbjct: 448 LWSTQQGNSVRLFT-GHR--GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 504
Query: 482 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H ++ +T P +L+A+ D ++++W
Sbjct: 505 HTDNITSLTFSPDSSLVASASMDNSVRVW 533
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/106 (34%), Positives = 57/106 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSP+G++L S D +++WD SG L K+L+ H + + + FS DS ++AS
Sbjct: 472 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRG--------HTDNITSLTFSPDSSLVAS 523
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
S D ++VW IRS C + + SE V V++ S +LS F
Sbjct: 524 ASMDNSVRVWDIRSSHCSTPADGSSSELVG--VYTGQMSNVLSVQF 567
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 60/242 (24%), Positives = 105/242 (43%)
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
E S DS++LA+G + IK+W +RS + L+ H V+ + + D L D
Sbjct: 271 EVSPDSKLLAAGFDNSCIKLWSLRSKK-LK--SEPHQVDVSRIHLACD---FLEEEDDED 324
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 388
+ G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 325 DNL-----GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 379
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 448
P+ D S +S++ + D +T+ ++ + ++ ++ G D V
Sbjct: 380 AYPVWDLDISPHSLYFASASHD------RTARLWSFD-RTYPLRIYA-GHLADVDCVK-- 429
Query: 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 508
P ++ D+ + +S Q G L H V+ + P+ LA+ GED +K
Sbjct: 430 FHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 489
Query: 509 LW 510
LW
Sbjct: 490 LW 491
Score = 107 (42.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V F DS L S S+D I+ W + S L + H+ V L S
Sbjct: 337 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPHSLYF 395
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
S S D TAR+ L+ + GH + V+ F + + + T S+D TV++W + +
Sbjct: 396 ASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 455
Query: 382 CLQTF 386
++ F
Sbjct: 456 SVRLF 460
Score = 71 (30.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 175 GLLPPGTQFDLFRGTAAMKQD---VEDMYP--TTLSHTIKFGTKSHAECARFSPDGQFLV 229
GL P + + AA+++ V+D P TT+ + T+ A SPD + L+
Sbjct: 221 GLEPADMPAPILQNEAALEESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSK-LL 279
Query: 230 SCSFDGF-IEVWDYLSGKLKKDLQYQAD 256
+ FD I++W S KLK + +Q D
Sbjct: 280 AAGFDNSCIKLWSLRSKKLKSE-PHQVD 306
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 217 (81.4 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 65/256 (25%), Positives = 112/256 (43%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F H + V C+ FS +LASGS+D +++W + + + + RAH+ V S+ F DG
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDG 77
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
++ S D T ++ K L H ++V A F+ DG +V+AS D TVK+WD
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 137
Query: 379 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFS-- 435
S +C+ ++ GG V V P I +++ + ++ ++++ +
Sbjct: 138 SRECVHSYCE----HGG--FVTYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Query: 436 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 495
S G F P G ++ D L G+L + + H+ V
Sbjct: 191 SAAVNGLSF-----HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTG 245
Query: 496 NLLATYGEDCTMKLWK 511
A+ G D + +WK
Sbjct: 246 EYFASGGSDEQVMVWK 261
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 57/196 (29%), Positives = 90/196 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
CA+FSPDG+ +VS S D +++WD K ++ + ++ H V ++F
Sbjct: 112 CAKFSPDGRLIVSASDDKTVKLWD----KSSRECVH----SYCEHGGFVTYVDFHPSGTC 163
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
+A+ D +KVW +R+ + L+ + HS V L F G+ +++ S DST +I L
Sbjct: 164 IAAAGMDNTVKVWDVRTHRLLQHYQ-LHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 222
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW--DLKSTDCLQTFKPP-PPLRG 394
G+LL GH F+ G + SD V VW + D + K P PP
Sbjct: 223 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATL 282
Query: 395 GDASVNSVHL-FPKNP 409
+ N + FP P
Sbjct: 283 ASSMGNLPEVDFPVPP 298
Score = 210 (79.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 63/229 (27%), Positives = 102/229 (44%)
Query: 205 SHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263
S +F G K C FSP G L S S D + +W +K + F H
Sbjct: 14 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW---VPNVKGE-----STVFRAHT 65
Query: 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 323
TV + F D + + S D +KVW + L L + H V FS DG I+S
Sbjct: 66 ATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVS 124
Query: 324 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 383
S D T ++ S + + + H +V F G+ + A D TVKVWD+++ L
Sbjct: 125 ASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL 184
Query: 384 QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVV 431
Q ++ L A+VN + P ++++ + S++ I+ L +G+++
Sbjct: 185 QHYQ----LHS--AAVNGLSFHPSG-NYLITASSDSTLKILDLMEGRLL 226
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 214 (80.4 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 73/296 (24%), Positives = 128/296 (43%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278
++FS DG FL S +D I +W+ G+ + + H ++ ++F+ DS L
Sbjct: 42 SQFSSDGSFLASAGYDQQIFLWNVF-GECENFAVLKG------HKGAIMEVKFNADSSHL 94
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLKS 337
S D ++VW + +G C+R ++H++ V S+ +R G Q++ S S D T +H ++S
Sbjct: 95 VSAGTDKTVRVWDMETGSCIRNF-KSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRS 153
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKPP-PPLRGG 395
+ K+F Y A+ ND + V+ D +KVWD+ D +
Sbjct: 154 KEAAKKFI--CKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSL 211
Query: 396 DASVNSVHLFPKNPDHIVVCNKTS-SIYIMTLQGQVVKSFSSGKREGGDFVAACV-SPKG 453
S N L + D C+ S I ++V + + C SP+
Sbjct: 212 SVSHNGNFLLSNSMD----CSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRD 267
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509
+I DR +Y ++ +S + + H V HP + +L + G D T+ L
Sbjct: 268 NYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFL 323
Score = 165 (63.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 35/127 (27%), Positives = 64/127 (50%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR-RLERAHSEGVTSLVFSRDGSQ 320
H + +FS D LAS D +I +W + G+C + + H + + F+ D S
Sbjct: 35 HGGEIYTSQFSSDGSFLASAGYDQQIFLWNV-FGECENFAVLKGHKGAIMEVKFNADSSH 93
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKS 379
++S D T R+ +++G ++ F+ H+ VN G +++ +AS D TV V D++S
Sbjct: 94 LVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRS 153
Query: 380 TDCLQTF 386
+ + F
Sbjct: 154 KEAAKKF 160
Score = 152 (58.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 42/210 (20%), Positives = 90/210 (42%)
Query: 303 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSSYVNDAIFTNDGS 361
+ H + + FS DGS + S +D + + + +GH + + F D S
Sbjct: 33 QGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSS 92
Query: 362 RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421
+V+A +D TV+VWD+++ C++ FK + VNSV + + P I + ++
Sbjct: 93 HLVSAGTDKTVRVWDMETGSCIRNFKSHTDI------VNSVDVNRRGPQMICSASDDGTV 146
Query: 422 YIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ ++ + K F ++ A + + + C G D + + + +++
Sbjct: 147 MVHDMRSKEAAKKFICKYQQ----TAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLS 202
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H + ++ + N L + DC++ W
Sbjct: 203 GHRDTITSLSVSHNGNFLLSNSMDCSLMSW 232
Score = 143 (55.4 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 46/228 (20%), Positives = 99/228 (43%)
Query: 157 PSRLMALIGQALKWQQHQGLLPPGTQFDL---FRGTAAMKQDVE--DMYPTTLSHTIKFG 211
P R +L+ + Q H G + +QF F +A Q + +++ + + G
Sbjct: 19 PKRTSSLMAPTMVLQGHGGEIYT-SQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKG 77
Query: 212 TKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 271
K +F+ D LVS D + VWD +G ++ F H + V ++
Sbjct: 78 HKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRN--------FKSHTDIVNSVDV 129
Query: 272 SRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
+R +M+ S S DG + V +RS + ++ + + T++ F+ ++ D+
Sbjct: 130 NRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQ--TAVTFNDAADNVICGGIDNQI 187
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
++ + + GH + +++G+ +++ S DC++ WD++
Sbjct: 188 KVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIR 235
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 223 (83.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 58/185 (31%), Positives = 97/185 (52%)
Query: 205 SHTIKFGTKSHAE---CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261
+HTIK T H++ C +F+ ++L++ S+D I++W SG+ K T
Sbjct: 373 THTIKTFT-GHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVK--------TLTG 421
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H + V + F D++ L SG D IKVW +GQC+ R H + V S+ F+ I
Sbjct: 422 HTKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATY-RGHEDAVVSVDFTN--KSI 476
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
+S S D T R+ + S + RGH+ +VN + + + +AS D T+++WD+ S +
Sbjct: 477 VSGSADHTVRVWHVDS-RTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNE 535
Query: 382 CLQTF 386
C++ F
Sbjct: 536 CIKVF 540
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 44/146 (30%), Positives = 71/146 (48%)
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
K WR G + HS+GVT L F+R +++ S+D+T +I + SG+ +K GH
Sbjct: 367 KNWR--KGTHTIKTFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGH 422
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
+ V +F D ++++ D T+KVW+ + C+ T+ RG + +V SV K
Sbjct: 423 TKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATY------RGHEDAVVSVDFTNK 474
Query: 408 N-----PDHIVVCNKTSSIYIMTLQG 428
+ DH V S TL+G
Sbjct: 475 SIVSGSADHTVRVWHVDSRTCYTLRG 500
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ 283
D Q L+S D I+VW+Y +G Q T+ H++ V+ ++F+ S + SGS
Sbjct: 432 DNQKLISGGLDSTIKVWNYHTG--------QCIATYRGHEDAVVSVDFTNKS--IVSGSA 481
Query: 284 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE 343
D ++VW + S C R H++ V + + I S S D+T R+ + S + +K
Sbjct: 482 DHTVRVWHVDSRTCYTL--RGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKV 539
Query: 344 FRG 346
F G
Sbjct: 540 FGG 542
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 223 (83.6 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 54/159 (33%), Positives = 86/159 (54%)
Query: 227 FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 286
FL S S D ++ ++ S K D +A T HD V I+ S+D ++AS SQD
Sbjct: 429 FLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKT 488
Query: 287 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 346
IK+W +G+ + L R H GV + F+ Q+ S S D T RI + + + ++ G
Sbjct: 489 IKLWDSSTGEVVGVL-RGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEG 547
Query: 347 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
H+ + I+ + G++VV+A++D VKVW L S +C+ T
Sbjct: 548 HTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVAT 586
Score = 191 (72.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETV 266
TIK + + S DG+ + S S D I++WD +G++ L+ H V
Sbjct: 460 TIKAHDRD-VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRG--------HRRGV 510
Query: 267 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
F+ S LASGS D I++W + + QC++ LE H+ + L++ G+Q++S +
Sbjct: 511 WACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLE-GHTGAILKLIYISQGTQVVSAAA 569
Query: 327 DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
D ++ L SG+ + H V DGS +V+ +D V VW
Sbjct: 570 DGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 166 (63.5 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 44/181 (24%), Positives = 87/181 (48%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETV 266
+IK + + D + L++ + +++ SG+ K ++ H+ V
Sbjct: 55 SIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMK--------AHETPV 106
Query: 267 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR-DGSQILSTS 325
+ + + +LA+G +G +KVW I +G + R H +++L F + + +L++
Sbjct: 107 ITMTIDPTNTLLATGGAEGLVKVWDI-AGAYVTHSFRGHGGVISALCFGKHQNTWVLASG 165
Query: 326 FD-STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
D S R+ L S + + F GHSS + F GS +++ S D TV+VW++K ++
Sbjct: 166 ADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVR 225
Query: 385 T 385
T
Sbjct: 226 T 226
Score = 141 (54.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI-----EFSRDSE 276
S DG +L + + D + +W+ L+ +D Y+ F H +V + + +
Sbjct: 373 SEDGVWLATGAKDNTVRLWN-LN---IEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPT 428
Query: 277 MLASGSQDGKIKVWRIRSGQCLRRLE---------RAHSEGVTSLVFSRDGSQILSTSFD 327
LAS SQD +K R G L + + +AH V ++ S+DG I S S D
Sbjct: 429 FLASSSQDRTLK--RFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQD 486
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
T ++ +G+++ RGH V F ++ + S D T+++W++ + C+QT +
Sbjct: 487 KTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLE 546
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 72/303 (23%), Positives = 124/303 (40%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE-MLASG 281
P+ + L + I WD+ SG L D T H ET I+ SE L S
Sbjct: 243 PEEKILYTAGEGNLILAWDWKSGSR---LDPGVDTT---HSETNAIIQVVPFSENTLLSV 296
Query: 282 SQDGKIKVWRIRSGQ---CLRRLERAHSEGVTSLVFSRDGSQILS-TSFDSTARIHGLKS 337
D + + + G+ +++L + E + D + S T F G +
Sbjct: 297 HSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQV 356
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+L+ GH+ V + DG + T + D TV++W+L D +K G A
Sbjct: 357 FGVLE---GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIED--NVYKCIHVFTGHTA 411
Query: 398 SVNSVHLFPKN----PDHIVVCNKTSSIYIMTLQGQVVKS-FSSG-----KREGGDFVAA 447
SV +V L P + P + ++ ++ L Q+ KS FS+ K D A
Sbjct: 412 SVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAI 471
Query: 448 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 507
VS G I +D+ + + +G++ +++ H + V + +P LA+ D T+
Sbjct: 472 QVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTI 531
Query: 508 KLW 510
++W
Sbjct: 532 RIW 534
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 214 (80.4 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 67/250 (26%), Positives = 116/250 (46%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQ 320
H V ++F+ ++ASGS D +I +WR+ G C + + H + L ++ DGSQ
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR-VVTASSDCTVKVWDLKS 379
I+S S D T R +++GK +K+ HSS+VN T G +++ S D T K+WD++
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438
+QTF P + + +V F D I + + + L+ G+ + G
Sbjct: 171 RGAIQTF--PDKYQ-----ITAVS-FSDAADKIFTGGVDNDVKVWDLRKGEATMTLE-GH 221
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS-GKLEHLMKVHEKDVIGVTHHPHRNL 497
++ +SP G ++ G D L + + +K+ E G H+ +NL
Sbjct: 222 QD--TITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFE----GHQHNFEKNL 275
Query: 498 L-ATYGEDCT 506
L ++ D T
Sbjct: 276 LKCSWSPDGT 285
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 67/298 (22%), Positives = 122/298 (40%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S +F+P G + S S D I +W + G K + + H +L +
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWR-VHGDCKNFMVLKG------HKNAILDLH 103
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ-ILSTSFDST 329
++ D + S S D ++ W + +G+ ++++ HS V S +R G I+S S D T
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE-HSSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAI-FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
A++ ++ ++ F Y A+ F++ ++ T D VKVWDL+ + T +
Sbjct: 163 AKLWDMRQRGAIQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEG 220
Query: 389 -PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
+ G S + +L D+ +C Y Q + VK F + +
Sbjct: 221 HQDTITGMSLSPDGSYLLTNGMDN-KLCVWDMRPYAP--QNRCVKIFEGHQHNFEKNLLK 277
Query: 448 CV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
C SP G + DR ++ + S + + + H V HP ++ + D
Sbjct: 278 CSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSD 335
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 55/204 (26%), Positives = 95/204 (46%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
++S S DG ++WD Q A +TF + + + FS ++ + +G D +
Sbjct: 154 IISGSDDGTAKLWDMR--------QRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDV 204
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK----SGKLLKE 343
KVW +R G+ LE H + +T + S DGS +L+ D+ + ++ + +K
Sbjct: 205 KVWDLRKGEATMTLE-GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKI 263
Query: 344 FRGHS-SYVNDAI---FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
F GH ++ + + ++ DG++V SSD V +WD S + +K P G SV
Sbjct: 264 FEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTI--YKLP----GHTGSV 317
Query: 400 NSVHLFPKNPDHIVVCNKTSSIYI 423
N P P I C+ +IY+
Sbjct: 318 NECVFHPTEPI-IGSCSSDKNIYL 340
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/212 (25%), Positives = 101/212 (47%)
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTA---RIHG-LKSGKLLKEFRGHSSYVNDAIFTNDG 360
H V ++ F+ G+ I S S D R+HG K+ +LK GH + + D +T+DG
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLK---GHKNAILDLHWTSDG 108
Query: 361 SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK--T 418
S++V+AS D TV+ WD+ +T K + + VNS + P I+ + T
Sbjct: 109 SQIVSASPDKTVRAWDV------ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 419 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
+ ++ M +G +++F K + A S + I+ G D ++ + + G+
Sbjct: 163 AKLWDMRQRG-AIQTFPD-KYQ---ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ H+ + G++ P + L T G D + +W
Sbjct: 218 LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 39/175 (22%), Positives = 73/175 (41%)
Query: 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
F K FS + + D ++VWD G +A T H +T+ +
Sbjct: 177 FPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKG--------EATMTLEGHQDTITGM 228
Query: 270 EFSRDSEMLASGSQDGKIKVWRIR----SGQCLRRLE-RAHS--EGVTSLVFSRDGSQIL 322
S D L + D K+ VW +R +C++ E H+ + + +S DG+++
Sbjct: 229 SLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVT 288
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ S D I S + + + GH+ VN+ +F + + SSD + + ++
Sbjct: 289 AGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 223 (83.6 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 61/171 (35%), Positives = 95/171 (55%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDY--LSGKLKKDLQYQADETFMMHDETVLCIEFSRDS 275
C+R QF+VS S D ++VWD +G + + +A T H++ V + S +
Sbjct: 440 CSRMKQ--QFVVSGSQDCTVKVWDLPETTGA-EGVMMMKARSTERAHEKDVNSVCVSPND 496
Query: 276 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHG 334
++LASGSQD K+W + S L + R H GV S+ FS QIL S S D + RI
Sbjct: 497 KLLASGSQDRTAKLWAL-SDLRLLGVCRGHRRGVWSVQFS-PVDQILGSASADGSVRIWS 554
Query: 335 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
++ LK F GH + V IF + G+++V++ SD VK+W +K+ +C++T
Sbjct: 555 IQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRT 605
Score = 181 (68.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 63/223 (28%), Positives = 102/223 (45%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265
H+I+ + SPD + LVS S + WD+ + ++ ++A +H
Sbjct: 56 HSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRS--WRA-----VHSVP 108
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGS--QIL 322
V + F S +LA+G DG IK+W + C L+ S GV LV F D S Q+
Sbjct: 109 VASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKG--SSGVVHLVEFHPDISRLQLF 166
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
S+S D RI L+S + + H S V F+ DG +V++ D VWDL+
Sbjct: 167 SSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQE--- 223
Query: 383 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 425
Q K P+ +V V L + D+ + K+ +++++T
Sbjct: 224 -QKVKRTIPVY---EAVEGVVLLSGSADYSEMGVKSDALHLVT 262
Score = 173 (66.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 74/292 (25%), Positives = 127/292 (43%)
Query: 225 GQFLVSCSFDGFIEVW--DYLSGKLKKDLQYQADETFMMHDETVLCIEFSR-DSEMLASG 281
G +C+ D + VW D SG++ Q H V I SR + + SG
Sbjct: 398 GSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTG------HSNAVGSIACSRMKQQFVVSG 451
Query: 282 SQDGKIKVWRI-----RSGQCL---RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIH 333
SQD +KVW + G + R ERAH + V S+ S + + S S D TA++
Sbjct: 452 SQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLW 511
Query: 334 GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR 393
L +LL RGH V F+ + +AS+D +V++W ++ CL+TF+
Sbjct: 512 ALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFE------ 565
Query: 394 GGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPK 452
G DASV + +F +V + + T++ + V++ + + + C +
Sbjct: 566 GHDASVLKI-IFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGC---R 621
Query: 453 GEWIYCVGEDRNLYCFSHQSGK---LEHLMKVHEKDVIGVTHHPHRNLLATY 501
E + D + ++ + K ++ KV ++ + TH RNL+ Y
Sbjct: 622 DELMVTGSADSTITVWTDKLRKTVIIKSTKKV-DQSLFKFTHF--RNLIYXY 670
Score = 167 (63.8 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 61/263 (23%), Positives = 116/263 (44%)
Query: 257 ETFMMHDETVLCIEF-SRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ F+ +++ VL ++F +D +A + ++KV+ + + C ++ H++ + S+
Sbjct: 338 QQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNSC--QILHGHTDTILSIDVF 395
Query: 316 RDGSQILSTSFDSTARIHGL--KSGKL--LKEFRGHSSYVNDAIFTNDGSR-VVTASSDC 370
R GS + + D + R+ + SG++ + + GHS+ V + + VV+ S DC
Sbjct: 396 RKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDC 455
Query: 371 TVKVWDLKST---DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 427
TVKVWDL T + + K R + VNSV + P N + ++ + + L
Sbjct: 456 TVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSP-NDKLLASGSQDRTAKLWALS 514
Query: 428 GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 487
+ G R G V SP + + D ++ +S Q + H+ V+
Sbjct: 515 DLRLLGVCRGHRRGVWSVQ--FSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVL 572
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
+ L + G D +KLW
Sbjct: 573 KIIFVSRGTQLVSSGSDGLVKLW 595
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/164 (26%), Positives = 76/164 (46%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S D Q + C++ I + +GK+ ++ Q D+ E + S D EML S
Sbjct: 30 SGDEQHIF-CTYGPKINILQISTGKIIHSIE-QEDQ------EDITAFALSPDDEMLVSA 81
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S+ ++ W + QC R HS V S+ F + + + D T ++ +
Sbjct: 82 SRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCT 141
Query: 342 KEFRGHSSYVNDAIFTNDGSRV--VTASSDCTVKVWDLKSTDCL 383
+G S V+ F D SR+ ++SSDC +++WDL+S+ C+
Sbjct: 142 HNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCV 185
Score = 140 (54.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 49/179 (27%), Positives = 82/179 (45%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD-SEM-L 278
F L + DG I++WD + +L+ + ++H +EF D S + L
Sbjct: 114 FDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSG---VVH-----LVEFHPDISRLQL 165
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
S S D I++W +RS +C+ LE +H VT+L FS DG ++S+ D + L+
Sbjct: 166 FSSSSDCAIRIWDLRSSRCVCVLE-SHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQ 224
Query: 339 KLLKEF------------RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
K+ + G + Y + +D +VTA S ++VWD S+ C+ T
Sbjct: 225 KVKRTIPVYEAVEGVVLLSGSADYSEMGV-KSDALHLVTAGSKGVLRVWDSSSSRCVFT 282
Score = 139 (54.0 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 69/285 (24%), Positives = 119/285 (41%)
Query: 244 SGKLKK-DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR--IRSGQ--CL 298
S +LK +L + + H +T+L I+ R M A+ ++D ++VWR + SG+ C+
Sbjct: 366 SSQLKVFELSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCV 425
Query: 299 RRLERAHSEGVTSLVFSRDGSQ-ILSTSFDSTARI---------HGLKSGKLLKEFRGHS 348
+ HS V S+ SR Q ++S S D T ++ G+ K R H
Sbjct: 426 AQ-GTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHE 484
Query: 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 408
VN + + + + S D T K+W L L RG V SV P
Sbjct: 485 KDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGV------CRGHRRGVWSVQFSPV- 537
Query: 409 PDHIV-VCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLY 466
D I+ + S+ I ++Q +K+F + VS +G + G D +
Sbjct: 538 -DQILGSASADGSVRIWSIQDFSCLKTFEG--HDASVLKIIFVS-RGTQLVSSGSDGLVK 593
Query: 467 CFSHQSGKLEHLMKVHEKDVIGVTHHPHRN-LLATYGEDCTMKLW 510
++ ++ + + H+ D + H R+ L+ T D T+ +W
Sbjct: 594 LWTIKTNECVRTLDAHQ-DKVWALHGGCRDELMVTGSADSTITVW 637
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 220 (82.5 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 113/513 (22%), Positives = 210/513 (40%)
Query: 21 NSLQQTFQTLQ-NECQVS--LNTVDSIETFVADINSGRWDA-ILPQVAQ-----LKLPRN 71
N +QQ + +Q NE ++S L T+ +ET D+ + D + Q + L++
Sbjct: 115 NQMQQKDKEIQMNEAKISEYLQTISDLETNCLDLRTKLQDLEVANQTLKDEYDALQITFT 174
Query: 72 KLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVRTYFDAHEA 131
LE+ + E EL A + +++ R RL+ L +
Sbjct: 175 ALEEKLRKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPV 234
Query: 132 YQDSTKEXXXXXXXXXXXXEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAA 191
QD E E S P R ++ Q GLL T R ++
Sbjct: 235 EQDDDIEVIVDETSDHTE-ETS---PVRAVSRAATKRLSQPAGGLLDSITNIFGRRSVSS 290
Query: 192 MK--QDVEDMYPTT-----LSHTIKFGTKSH---AECARFSPDGQFLVSCSFDGFIEVWD 241
+ QD+ D +P + + T + +H +FSP + L + D +++W+
Sbjct: 291 IPVPQDIMDTHPASGKDVRVPTTASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWE 350
Query: 242 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 301
K +++ + + + IEF L + S D ++W + + LR
Sbjct: 351 AFGDKC----EFKG--SLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYR-LRHT 403
Query: 302 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDG 360
HS V S F D ++I+S S D T ++ L+S +K F G S ND + T
Sbjct: 404 LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSC--NDIVCTEQC 461
Query: 361 SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 420
V++ D ++ WD++S ++ + L G + ++ L P+ + ++ C++
Sbjct: 462 --VMSGHFDKKIRFWDIRSESVVREME----LLG---KITALDLNPERTE-LLSCSRDDL 511
Query: 421 IYIMTLQGQVVK-SFSS-GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
+ ++ L+ VK +FS+ G + G D+ SP G ++ + +LY +S +GK+E +
Sbjct: 512 LKVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKV 571
Query: 479 M-KVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ K H + V P + + + LW
Sbjct: 572 LSKQHSSSINAVAWAPSGLHVVSVDKGSRAVLW 604
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 219 (82.2 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 52/161 (32%), Positives = 79/161 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SP + S S D +W + D Y + H V C++F +S LA+G
Sbjct: 393 SPYSLYFASGSHDRTARLWSF-------DRTYPL-RIYAGHLADVDCVKFHPNSNYLATG 444
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++W + G +R L H V SL FS +G + S D ++ L SG L
Sbjct: 445 STDKTVRLWSAQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLF 503
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
KE RGH+ + F+ D S + +AS D +V+VWD+++T C
Sbjct: 504 KELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHC 544
Score = 176 (67.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 44/155 (28%), Positives = 76/155 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + +C +F P+ +L + S D + +W G + F H VL +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR--------LFTGHRGPVLSLA 475
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D S I S S D++
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFKEL-RGHTDNITSLTFSPDSSLIASASMDNSV 534
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365
R+ +++ G SS + ++T S V++
Sbjct: 535 RVWDIRNTHCSAPTDGSSSELV-GVYTGQMSNVLS 568
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 70/261 (26%), Positives = 107/261 (40%)
Query: 154 VVPPSRLMA--LIGQALK-WQ-QHQGLLPPGTQFDLFRGTAAM----KQDVEDMYPTTLS 205
+ P S+L+A +K W + + L P + D+ R A ++D ED T
Sbjct: 276 ISPESKLLAAGFDNSCIKLWSLRSKKLKPEPHRVDVSRIHLACDILEEEDDEDDDVGTEM 335
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265
++ G RF D L+SCS D I WD G + YQ H
Sbjct: 336 KVLR-GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG------HAYP 386
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 325
V ++ S S ASGS D ++W LR + H V + F + + + + S
Sbjct: 387 VWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGS 445
Query: 326 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
D T R+ + G ++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 446 TDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL--- 502
Query: 386 FKPPPPLRGGDASVNSVHLFP 406
FK LRG ++ S+ P
Sbjct: 503 FKE---LRGHTDNITSLTFSP 520
Score = 157 (60.3 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 303 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 339 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLY 398
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+ S D T ++W T L+ + G A V+ V P N +++ + ++
Sbjct: 399 FASGSHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDKTVR 451
Query: 423 IMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV 481
+ + Q G V+ F+ G R G ++ SP G+++ GED+ L + SG L ++
Sbjct: 452 LWSAQQGNSVRLFT-GHR--GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 508
Query: 482 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H ++ +T P +L+A+ D ++++W
Sbjct: 509 HTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSP+G++L S D +++WD SG L K+L+ H + + + FS DS ++AS
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFKELRG--------HTDNITSLTFSPDSSLIAS 527
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
S D ++VW IR+ C + + SE V V++ S +LS F
Sbjct: 528 ASMDNSVRVWDIRNTHCSAPTDGSSSELVG--VYTGQMSNVLSVQF 571
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 59/243 (24%), Positives = 107/243 (44%)
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQILSTSFDS 328
E S +S++LA+G + IK+W +RS ++L+ H V+ + + D IL D
Sbjct: 275 EISPESKLLAAGFDNSCIKLWSLRS----KKLKPEPHRVDVSRIHLACD---ILEEEDDE 327
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFK 387
+ G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 328 DDDV-----GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQG 382
Query: 388 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
P+ D ++ L+ + H ++T+ ++ + ++ ++ G D V
Sbjct: 383 HAYPV--WDVDISPYSLYFASGSH----DRTARLWSFD-RTYPLRIYA-GHLADVDCVK- 433
Query: 448 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 507
P ++ D+ + +S Q G L H V+ + P+ LA+ GED +
Sbjct: 434 -FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRL 492
Query: 508 KLW 510
KLW
Sbjct: 493 KLW 495
Score = 57 (25.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 175 GLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSPDGQ 226
GL P + + AA++ Q+ V+D P TT+ + T+ A SP+ +
Sbjct: 222 GLEPTDMPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPESK 281
Query: 227 FLVSCSFDGF-IEVWDYLSGKLKKD 250
L++ FD I++W S KLK +
Sbjct: 282 -LLAAGFDNSCIKLWSLRSKKLKPE 305
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 189 (71.6 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 62/256 (24%), Positives = 122/256 (47%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
F + V C+ F + +LA G G+ +++ + +++L + V ++ ++ G
Sbjct: 256 FYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNP-VNTVSVNQTG 314
Query: 319 SQI-LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ +S ++ +S + + +GH N ++ DGSRVVTAS D +KVWD+
Sbjct: 315 EWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDI 374
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSS 436
S CL TF+ +SV +V F K + + ++ L + + ++F+
Sbjct: 375 TSGFCLATFEEHT------SSVTAVQ-FAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTG 427
Query: 437 GKREGGDFVAACVSPKGEWIYCVG--EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
+R F V P GE + C G ++ +++ +S Q+G+L + HE V ++
Sbjct: 428 TERI--QFNCLAVDPSGE-VVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQE 484
Query: 495 RNLLATYGEDCTMKLW 510
++LA+ D T+++W
Sbjct: 485 NSVLASASWDKTIRIW 500
Score = 171 (65.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 42/158 (26%), Positives = 75/158 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SPDG +V+ S DG I+VWD SG TF H +V ++F++ +++ S
Sbjct: 353 YSPDGSRVVTASEDGKIKVWDITSGFCLA--------TFEEHTSSVTAVQFAKRGQVMFS 404
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS-TARIHGLKSGK 339
S DG ++ W + + R L G + + S D+ + +++G+
Sbjct: 405 SSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQ 464
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
LL GH V+ F+ + S + +AS D T+++W +
Sbjct: 465 LLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSI 502
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL-CIEFS 272
S +F+ GQ + S S DG + WD + +Y+ TF + C+
Sbjct: 388 SSVTAVQFAKRGQVMFSSSLDGTVRAWDLI--------RYRNFRTFTGTERIQFNCLAVD 439
Query: 273 RDSEMLASGSQDG-KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
E++ +GS D I VW +++GQ L L H V+ L FS++ S + S S+D T R
Sbjct: 440 PSGEVVCAGSLDNFDIHVWSVQTGQLLDALS-GHEGPVSCLSFSQENSVLASASWDKTIR 498
Query: 332 I 332
I
Sbjct: 499 I 499
Score = 132 (51.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 264 ETVLCIEFSRDSEMLASGSQDGK-IKVWRI----RSGQCL----RRLERAHSEGVTSLVF 314
E ++FS D + A S G+ +++W+ + Q R+ H + +TSL +
Sbjct: 97 EKCSAVKFSPDGRLFALAS--GRFLQIWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTW 154
Query: 315 SRDGSQILSTSFDSTARIHGLKSGK---LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371
S+D IL+TS D +A+I + S + F GH YV A F++D ++ T S D
Sbjct: 155 SQDSRFILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGA 214
Query: 372 VKVWD 376
V VW+
Sbjct: 215 VFVWE 219
Score = 82 (33.9 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265
H + G +S D +F+++ S D ++W S + K+L A TF H +
Sbjct: 139 HRVHAGHFQDITSLTWSQDSRFILTTSKDLSAKIWSVDSEE--KNL---AATTFNGHRDY 193
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVW 290
V+ FS D E + + S+DG + VW
Sbjct: 194 VMGAFFSHDQEKIYTVSKDGAVFVW 218
Score = 52 (23.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 167 ALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQ 226
+L W Q + T DL ++ + +++ TT + G + + A FS D +
Sbjct: 151 SLTWSQDSRFILT-TSKDLSAKIWSVDSEEKNLAATTFN-----GHRDYVMGAFFSHDQE 204
Query: 227 FLVSCSFDGFIEVWDY 242
+ + S DG + VW++
Sbjct: 205 KIYTVSKDGAVFVWEF 220
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 213 (80.0 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 72/298 (24%), Positives = 126/298 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F P+G L S FD I +W+ D A T H V+ +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-----DCDNYA--TLKGHSGAVMELH 116
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDST 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D T
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 176 VKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 389 -PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 448 CV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 349
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 51 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 110
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 164
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 213 (80.0 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 80/307 (26%), Positives = 134/307 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G ++ C +SPD + ++S S DG + +WD + K+ T++M C
Sbjct: 68 GHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFT--TNKEHAVTMPTTWIM-----ACA- 119
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA---HSEGVTSLVFSRDGSQILSTSFD 327
++ +A G D K+ V+ I S + + +R H+ ++ ++ QIL+ S D
Sbjct: 120 YAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGD 179
Query: 328 STARIHGLKSGKLLKEFRGHSSYVN--DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
ST + ++SG+LL+ F GHS V D G+ V+ S D +WD++S +Q+
Sbjct: 180 STCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQS 239
Query: 386 FKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS--IYIMTLQGQVVKSFSSGKREGGD 443
F+ G + VNSV P D I + SS +Y M +V G +
Sbjct: 240 FE------GHQSDVNSVKFHPCG-DAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVN 292
Query: 444 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGE 503
V VS G ++ D + + + L+ HE V V P L+T
Sbjct: 293 SVDFSVS--GRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSW 350
Query: 504 DCTMKLW 510
D T+++W
Sbjct: 351 DYTIRVW 357
Score = 181 (68.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 58/222 (26%), Positives = 96/222 (43%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
D + T H + T CA ++P G F+ D + V+ S D + A +
Sbjct: 98 DAFTTNKEHAVTMPTTWIMACA-YAPSGNFVACGGLDNKVTVYPITS-----DEEMAAKK 151
Query: 258 -TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS--LVF 314
T H + C + + + +GS D +W + SGQ L+ HS V + L
Sbjct: 152 RTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFH-GHSGDVMAIDLAP 210
Query: 315 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
+ G+ +S S D A I ++SG +++ F GH S VN F G + T S D + ++
Sbjct: 211 NETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRL 270
Query: 375 WDLKSTDCLQTFKPPPPLRGG---DASVNSVHLFPKNPDHIV 413
+D+++ + F + G D SV+ LF D+ V
Sbjct: 271 YDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTV 312
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 213 (80.0 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 72/298 (24%), Positives = 126/298 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F P+G L S FD I +W+ D A T H V+ +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-----DCDNYA--TLKGHSGAVMELH 117
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDST 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D T
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 177 VKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 389 -PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 448 CV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 349
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 213 (80.0 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 72/298 (24%), Positives = 126/298 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F P+G L S FD I +W+ D A T H V+ +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-----DCDNYA--TLKGHSGAVMELH 117
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDST 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D T
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 177 VKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 389 -PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 448 CV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 349
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 231 (86.4 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 65/200 (32%), Positives = 96/200 (48%)
Query: 189 TAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQ----FLVSCSFDGFIEVWDYLS 244
TA ++ + + P+ + K K AE L S S D + +WD +
Sbjct: 667 TALIRSNFSEDLPSWICQLPKVNEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPAT 726
Query: 245 GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA 304
G L++ L+ H VL + FS D +LASGS D +++W +G L++ R
Sbjct: 727 GSLQQTLEG--------HSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGS-LQQTLRG 777
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364
HS V S+ FS DG + S SFD T R+ +G L + RGHS V F+ DG +
Sbjct: 778 HSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLA 837
Query: 365 TASSDCTVKVWDLKSTDCLQ 384
+ S D TV++WD +T LQ
Sbjct: 838 SGSFDKTVRLWD-PATGTLQ 856
Score = 197 (74.4 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 50/130 (38%), Positives = 70/130 (53%)
Query: 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336
+LASGS D +++W +G + LE HS V S+ FS DG + S SFD T R+
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLE-GHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 337 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 396
+G L + RGHS++V F+ DG + + S D TV++WD +T LQ LRG
Sbjct: 768 TGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD-PATGSLQQ-----TLRGHS 821
Query: 397 ASVNSVHLFP 406
+V SV P
Sbjct: 822 DTVRSVAFSP 831
Score = 162 (62.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 45/126 (35%), Positives = 66/126 (52%)
Query: 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH 262
+L T++ G + FSPDG+ L S SFD + +WD +G L+ +T H
Sbjct: 770 SLQQTLR-GHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQ--------QTLRGH 820
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
+TV + FS D +LASGS D +++W +G + L + VT L FS+DGS I
Sbjct: 821 SDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT--VTELQFSQDGSYI- 877
Query: 323 STSFDS 328
ST+ S
Sbjct: 878 STNLGS 883
Score = 37 (18.1 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 28 QTLQNECQVSLNTVDSIETFVADIN 52
+T+Q+ Q + +++S T ADIN
Sbjct: 524 KTMQSHLQKDICSLESPGTRRADIN 548
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 222 (83.2 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 62/249 (24%), Positives = 113/249 (45%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S + F+ + +++ + G I++WD K+ + F H +E
Sbjct: 56 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVR--------AFTGHRSNCSAVE 107
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F E LASGS D ++VW R C++ + H+ G++++ FS DG ++S D+
Sbjct: 108 FHPFGEFLASGSSDTNLRVWDTRKKGCIQTY-KGHTRGISTIEFSPDGRWVVSGGLDNVV 166
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
++ L +GKLL EF+ H + F + T S+D TVK WDL++ + + T +P
Sbjct: 167 KVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEA 226
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKS-FSSGKREGGDFVAACV 449
V ++ P + C + + + + + + G GDF C+
Sbjct: 227 ------TGVRAIAFHPDG--QTLFCGLDDGLKVYSWEPVICRDGVDMGWSTLGDF---CI 275
Query: 450 SPKGEWIYC 458
+ +G++I C
Sbjct: 276 N-EGKFIGC 283
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 60/266 (22%), Positives = 115/266 (43%)
Query: 253 YQADETFMMHDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLERA-HSEGVT 310
Y+ E F+ H V C+ + S +L +G D K+ +W I G+ + H+ V
Sbjct: 6 YKLQE-FVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSI--GKTTSPMSLCGHTSPVD 62
Query: 311 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 370
S+ F+ + +L+ + ++ L+ K+++ F GH S + F G + + SSD
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122
Query: 371 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQ 429
++VWD + C+QT+K G ++++ P +V + + + L G+
Sbjct: 123 NLRVWDTRKKGCIQTYK------GHTRGISTIEFSPDGR-WVVSGGLDNVVKVWDLTAGK 175
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIG 488
++ F K G + P E++ G DR + + ++ +L + V
Sbjct: 176 LLHEF---KCHEGPIRSLDFHPL-EFLLATGSADRTVKFWDLETFELIGTTRPEATGVRA 231
Query: 489 VTHHPHRNLLATYGEDCTMKL--WKP 512
+ HP L G D +K+ W+P
Sbjct: 232 IAFHPDGQTLFC-GLDDGLKVYSWEP 256
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 223 (83.6 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 89/309 (28%), Positives = 140/309 (45%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278
A FS D Q + SC D ++V+ SG+ + L+ A HD+ +LC FS D + +
Sbjct: 620 ACFSRDRQRIASCGADKTLQVFKAESGE--RLLEISA------HDDEILCCTFSADDKYV 671
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS-RDGSQILSTSFD-----STARI 332
A+ S D K+K+W R+G+CL E H+E V F+ R G +L+T D +T ++
Sbjct: 672 ATCSADKKVKIWNSRTGKCLYVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQL 730
Query: 333 HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL 392
LK GH + V+ F+ + + + S+D TVK+W++ S + L+T +
Sbjct: 731 WDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFF 790
Query: 393 RGGDASVNSVHLFPK------NPDHIVVC--NKTSSIYIMT--LQGQVVKSFSSGKREGG 442
R D + V + K + D I+V NK + T L QV+ S S +
Sbjct: 791 RNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHS-TIQYC 849
Query: 443 DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 502
DF A +C E N+ S + H VH VT +L T
Sbjct: 850 DFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVH-----CVTFSSDGSLFLTSS 904
Query: 503 EDCTMKLWK 511
ED T+++W+
Sbjct: 905 EDQTIRIWE 913
Score = 198 (74.8 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 55/190 (28%), Positives = 89/190 (46%)
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM--HDETVLCIE 270
++ + RF+ D Q L+S + D I+VW++ Q +E + H E +
Sbjct: 1009 RTSVQHCRFTTDCQTLISSAHDAVIQVWNW-----------QLNECVFLKGHKEAIKDFA 1057
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F +S++L S S DG +KVW I +G+ + H V S S DGS+ STS D TA
Sbjct: 1058 FLENSKLL-SWSFDGTVKVWNITTGKTEKDFA-CHRGAVLSCAVSPDGSRFSSTSADKTA 1115
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ-----T 385
+I +S +L E +GH + V + F+ + T +++WD+ + + L T
Sbjct: 1116 KIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVT 1175
Query: 386 FKPPPPLRGG 395
P GG
Sbjct: 1176 VDEEEPTHGG 1185
Score = 197 (74.4 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 60/242 (24%), Positives = 123/242 (50%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWD-YLSGKLK----K 249
D++D Y +T+ FG + RFSP+ ++ SCS DG +++W+ + + +L+ K
Sbjct: 732 DLKDKY---CRNTM-FGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIK 787
Query: 250 DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGV 309
D ADE + V C +SR S+ + +++ K+ ++ + + L ++ +H +
Sbjct: 788 DFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKN-KLLLFDVTTSNLLTQVIISHHSTI 846
Query: 310 TSLVFSRDGSQILSTSFDSTA-RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368
F G ++++ + + + +KS + + RGH+S+V+ F++DGS +T+S
Sbjct: 847 QYCDFCA-GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSE 905
Query: 369 DCTVKVWDL----KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYI 423
D T+++W+ KS+D + + G+ + +++ N HI + N T SI +
Sbjct: 906 DQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIY----NQKHIQLINGNTDSIIM 961
Query: 424 MT 425
T
Sbjct: 962 QT 963
Score = 188 (71.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 55/191 (28%), Positives = 87/191 (45%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C S D +F +G I+V L G++ + A T + H C F+ D +
Sbjct: 972 CCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE--AYRTSVQH-----C-RFTTDCQT 1023
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
L S + D I+VW + +C+ + H E + F + S++LS SFD T ++ + +
Sbjct: 1024 LISSAHDAVIQVWNWQLNECV--FLKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNITT 1080
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
GK K+F H V + DGSR + S+D T K+W +S+ L L+G +A
Sbjct: 1081 GKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHE------LKGHEA 1134
Query: 398 SVNSVHLFPKN 408
V P N
Sbjct: 1135 CVRCSAFSPSN 1145
Score = 177 (67.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 66/224 (29%), Positives = 101/224 (45%)
Query: 213 KSHAECAR-FS-PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
K H E + F+ + L+S SFDG ++VW+ +GK +KD F H VL
Sbjct: 1047 KGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKD--------FACHRGAVLSCA 1098
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS-T 329
S D +S S D K+W S L L + H V FS +++L+T D
Sbjct: 1099 VSPDGSRFSSTSADKTAKIWSFESSSVLHEL-KGHEACVRCSAFS-PSNKLLATGDDKGD 1156
Query: 330 ARIHGLKSGKLL---------KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
RI + +G+LL +E H +V D F+ D +V SS +K WD+ +
Sbjct: 1157 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV--SSGGYLKWWDVTTG 1214
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 424
+ LQTF G ++ S+H+ P N D V + +Y++
Sbjct: 1215 ESLQTF-----YTNG-TNLKSIHVSP-NFDVYVTVDNLGILYVL 1251
Score = 169 (64.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 73/288 (25%), Positives = 117/288 (40%)
Query: 242 YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 301
YL KK L+ + H + V FSRD + +AS D ++V++ SG+ L +
Sbjct: 593 YLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEI 652
Query: 302 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 361
AH + + FS D + + S D +I ++GK L + H+ VN F N
Sbjct: 653 S-AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRG 711
Query: 362 R--VVTASSDC----TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV-HL-FPKNPDHIV 413
+ + T S D TV++WDLK C T + G VN+V H F N D+I
Sbjct: 712 QYLLATCSDDTYIKNTVQLWDLKDKYCRNT------MFG---HVNAVSHCRFSPNDDYIA 762
Query: 414 VCNKTSSIYIMTLQGQ------VVKSFSSGKREGGDFVAACV-----SPKGEWIYCVGED 462
C+ ++ + + +K F E D V V S + I V ++
Sbjct: 763 SCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKN 822
Query: 463 RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ L S L ++ H + L+A C+++LW
Sbjct: 823 KLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVALSHCSIELW 870
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 178 PPGTQFDLFRGTAAMKQ-DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGF 236
P G++F T+A K + +++ H +K G ++ C+ FSP + L + G
Sbjct: 1101 PDGSRFS---STSADKTAKIWSFESSSVLHELK-GHEACVRCSAFSPSNKLLATGDDKGD 1156
Query: 237 IEVWDYLSGKLKKDLQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG 295
I +WD L+G+L DE H V + FS DS+ML S G +K W + +G
Sbjct: 1157 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG--GYLKWWDVTTG 1214
Query: 296 QCLR 299
+ L+
Sbjct: 1215 ESLQ 1218
Score = 123 (48.4 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RDS 275
C FS D +++ +CS D +++W+ +GK Y +E H E V C +F+ R
Sbjct: 661 CCTFSADDKYVATCSADKKVKIWNSRTGKCL----YVYEE----HTEQVNCCQFNNRRGQ 712
Query: 276 EMLASGSQDGKIK----VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331
+LA+ S D IK +W ++ C R H V+ FS + I S S D T +
Sbjct: 713 YLLATCSDDTYIKNTVQLWDLKDKYC-RNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVK 771
Query: 332 IHGLKSGKLLK 342
+ + S L+
Sbjct: 772 LWNVHSANELR 782
Score = 123 (48.4 bits), Expect = 0.00074, P = 0.00074
Identities = 31/115 (26%), Positives = 59/115 (51%)
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
+ + C S D + A G ++G IKV R+ G+ L E A+ V F+ D ++
Sbjct: 967 ESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSRE-AYRTSVQHCRFTTDCQTLI 1025
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
S++ D+ ++ + + + +GH + D F + S++++ S D TVKVW++
Sbjct: 1026 SSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFL-ENSKLLSWSFDGTVKVWNI 1078
Score = 113 (44.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 40/177 (22%), Positives = 78/177 (44%)
Query: 335 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
L G++L + + V FT D +++++ D ++VW+ + +C+ F L+G
Sbjct: 996 LLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV--F-----LKG 1048
Query: 395 GDASVNSVHLFPKNPDHIVVC-NKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
++ F +N + + T ++ +T G+ K F+ + G ++ VSP G
Sbjct: 1049 HKEAIKDF-AFLENSKLLSWSFDGTVKVWNITT-GKTEKDFACHR---GAVLSCAVSPDG 1103
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
D+ +S +S + H +K HE V P LLAT + +++W
Sbjct: 1104 SRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1160
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 218 (81.8 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 82/319 (25%), Positives = 131/319 (41%)
Query: 201 PTTLSHTIKFGTKSHAECARFSP-DGQFLVSCSFDGFIEVWD-YLSGKLKKDLQYQADET 258
P L HT TK RF P G L+S D +++WD Y SGK + T
Sbjct: 271 PKRLVHTWSGHTKG-VSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMR--------T 321
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
+M H + V I FS D + D IK W +GQ + V L D
Sbjct: 322 YMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDK 381
Query: 319 SQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
IL + + +G++ +E+ H VN F ++ R VT+S D +++VW+
Sbjct: 382 QNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF 441
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSG 437
++ P S+ S+ + P N + + + + I I + + + +
Sbjct: 442 GIPVVIKYISEPHM-----HSMPSISVHP-NGNWLAAQSLDNQILIYSTRERF--QLNKK 493
Query: 438 KREGGDFVA--AC---VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHH 492
KR G VA AC SP G ++ + + + +S K+ +K H IG H
Sbjct: 494 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWH 553
Query: 493 P-HRNLLATYGEDCTMKLW 510
P ++ +AT G D +K W
Sbjct: 554 PLEQSKVATCGWDGLIKYW 572
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 193 (73.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 58/214 (27%), Positives = 97/214 (45%)
Query: 176 LLPP---GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS 232
LLP + F+L R V D+ T H K +++P+G+ L+ S
Sbjct: 96 LLPSLAYSSSFNLNRRNNKNNLAVLDLQ-TKFVHLSSNKVKHTINTVKWTPEGRRLLVAS 154
Query: 233 FDGFIEVWDYLSGKLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWR 291
G +W+ ++ ET M H+ +L +++S E L SG Q+G +K W+
Sbjct: 155 HSGEFTLWNGMTFNF---------ETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQ 205
Query: 292 IRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 351
+ + AH+ GV + FS + S+ L+ DS +I +GK + GH V
Sbjct: 206 PNFNN-VNNIS-AHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEV 263
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
A + + +V+ S D VK+WD +S +C+ T
Sbjct: 264 KSADWHPNLGLIVSGSKDNLVKLWDPRSANCVST 297
Score = 115 (45.5 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 214 SHAECAR---FSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
+HA R FSP D +FL +C D I++W++ +GK + T H V
Sbjct: 216 AHANGVRDIAFSPNDSKFL-TCGDDSAIKIWNFNNGK--------EERTLSGHHWEVKSA 266
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL--STSFD 327
++ + ++ SGS+D +K+W RS C+ L V F +G+ L S S D
Sbjct: 267 DWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLH-GFKHTVNKTRFQPNGTARLLASVSRD 325
Query: 328 STARIHGLKSGK 339
+ RI L++ K
Sbjct: 326 RSCRIFDLRTMK 337
Score = 69 (29.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 482 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
HEK + V +HP +LL T G D T + W
Sbjct: 415 HEKAIHAVEYHPLGHLLCTAGSDKTARFW 443
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 193 (73.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 58/214 (27%), Positives = 97/214 (45%)
Query: 176 LLPP---GTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS 232
LLP + F+L R V D+ T H K +++P+G+ L+ S
Sbjct: 96 LLPSLAYSSSFNLNRRNNKNNLAVLDLQ-TKFVHLSSNKVKHTINTVKWTPEGRRLLVAS 154
Query: 233 FDGFIEVWDYLSGKLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWR 291
G +W+ ++ ET M H+ +L +++S E L SG Q+G +K W+
Sbjct: 155 HSGEFTLWNGMTFNF---------ETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQ 205
Query: 292 IRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 351
+ + AH+ GV + FS + S+ L+ DS +I +GK + GH V
Sbjct: 206 PNFNN-VNNIS-AHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEV 263
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
A + + +V+ S D VK+WD +S +C+ T
Sbjct: 264 KSADWHPNLGLIVSGSKDNLVKLWDPRSANCVST 297
Score = 115 (45.5 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 214 SHAECAR---FSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
+HA R FSP D +FL +C D I++W++ +GK + T H V
Sbjct: 216 AHANGVRDIAFSPNDSKFL-TCGDDSAIKIWNFNNGK--------EERTLSGHHWEVKSA 266
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL--STSFD 327
++ + ++ SGS+D +K+W RS C+ L V F +G+ L S S D
Sbjct: 267 DWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLH-GFKHTVNKTRFQPNGTARLLASVSRD 325
Query: 328 STARIHGLKSGK 339
+ RI L++ K
Sbjct: 326 RSCRIFDLRTMK 337
Score = 69 (29.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 482 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
HEK + V +HP +LL T G D T + W
Sbjct: 415 HEKAIHAVEYHPLGHLLCTAGSDKTARFW 443
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 83/327 (25%), Positives = 134/327 (40%)
Query: 195 DVEDM-Y-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ 252
D+ D Y P H TK + F G L+SCS D I++W+ + +
Sbjct: 268 DIPDKCYLPKKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNER------ 321
Query: 253 YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSL 312
+ TF+ H + V + F+ S + D IK+W +GQC+ R
Sbjct: 322 -RCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTNRKVPYCVKF 380
Query: 313 VFSRDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371
D +L + ++SG++++E+ H VN F ++ R V+ S D +
Sbjct: 381 NPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKS 440
Query: 372 VKVWDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ 429
++VW+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 441 LRVWEW---DIPADFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNR 492
Query: 430 VVKSFSSGKREGGDFVA--AC---VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEK 484
+ K G VA AC SP ++ D L + ++ KL H +K H+K
Sbjct: 493 F--RLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDK 550
Query: 485 DVIGVTHHPHR-NLLATYGEDCTMKLW 510
I HPH + + T G D +KLW
Sbjct: 551 VCISALWHPHETSKVITCGWDGQIKLW 577
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 155 (59.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D IK+W + +C+R + H V+S+ +G I+S S D T ++ +++G +
Sbjct: 1 SADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV 59
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
K F GH +V DG+ + + S+D TV+VW + + +C
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 100
Score = 130 (50.8 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 33/129 (25%), Positives = 65/129 (50%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H E V + ++D ++AS S D ++VW + + +C L R H V + ++
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL-REHEHVVECISWAP 118
Query: 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ +S+ S + G + G H ++V +F + G +++ + D T++VWD
Sbjct: 119 E------SSYSSISEATGSEVG--------HDNWVRGVLFHSGGKFILSCADDKTLRVWD 164
Query: 377 LKSTDCLQT 385
K+ C++T
Sbjct: 165 YKNKRCMKT 173
Score = 122 (48.0 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 232 SFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR 291
S D I++WD+ G ++ T HD V + + + + S S+D IK+W
Sbjct: 1 SADMTIKLWDF-QG-------FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 52
Query: 292 IRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 351
+++G C++ H E V + ++DG+ I S S D T R+ + + + E R H V
Sbjct: 53 VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 111
Score = 114 (45.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 367 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426
S+D T+K+WD + +C++T + G D +V+SV + P N DHIV ++ +I + +
Sbjct: 1 SADMTIKLWDFQGFECIRT------MHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEV 53
Query: 427 Q-GQVVKSFSSGKRE 440
Q G VK+F+ G RE
Sbjct: 54 QTGYCVKTFT-GHRE 67
Score = 113 (44.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 302 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 361
E H V ++F G ILS + D T R+ K+ + +K H +V F
Sbjct: 132 EVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 191
Query: 362 RVVTASSDCTVKVWDLK 378
VVT S D TVKVW+ +
Sbjct: 192 YVVTGSVDQTVKVWECR 208
Score = 103 (41.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282
P+G +VS S D I++W+ +G K TF H E V + ++D ++AS S
Sbjct: 34 PNGDHIVSASRDKTIKMWEVQTGYCVK--------TFTGHREWVRMVRPNQDGTLIASCS 85
Query: 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS 319
D ++VW + + +C L R H V + ++ + S
Sbjct: 86 NDQTVRVWVVATKECKAEL-REHEHVVECISWAPESS 121
Score = 97 (39.2 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
S D T ++ + + ++ GH V+ +G +V+AS D T+K+W++++ C++
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 385 TF 386
TF
Sbjct: 61 TF 62
Score = 66 (28.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 41 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 99
Query: 247 LKKDLQYQADETFMMHDETVLCIEFSRDSEML----ASGSQDG 285
K +L+ H+ V CI ++ +S A+GS+ G
Sbjct: 100 CKAELRE--------HEHVVECISWAPESSYSSISEATGSEVG 134
Score = 62 (26.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 453 GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
G++I +D+ L + +++ + + HE V + H + T D T+K+W+
Sbjct: 148 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 44 (20.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 482 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H+ V GV H + + +D T+++W
Sbjct: 135 HDNWVRGVLFHSGGKFILSCADDKTLRVW 163
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 211 (79.3 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 72/298 (24%), Positives = 126/298 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F P+G L S FD I +W+ D A T H V+ +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-----DCDNYA--TLKGHSGAVMELH 117
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDST 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D T
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 177 VKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 389 -PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 448 CV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 349
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
+ + ++ + ++ + V++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 213 (80.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 72/294 (24%), Positives = 125/294 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F P+G L S FD I +W+ D A T H V+ +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-----DCDNYA--TLKGHSGAVMELH 116
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDST 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D T
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 176 VKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 389 -PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 448 CV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLAT 500
C SP G I DR +Y + S ++ + + H + V HP ++ T
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIET 344
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 349
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 51 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 110
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 164
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 208 (78.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 71/263 (26%), Positives = 120/263 (45%)
Query: 258 TFMMHDETVLCIEFS-RDSEMLASGSQDGKIKVWRIRS------GQCLRRLERAHSEGVT 310
T + H+ V I + +D + + S S+D + VW++ G +RL HS ++
Sbjct: 10 TLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLY-GHSHFIS 68
Query: 311 SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC 370
+V S DG+ LS S+D T R+ L +GK + F GH+ V F+ D ++V+ S D
Sbjct: 69 DVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDK 128
Query: 371 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQ 429
T+K+W+ + +C T + G V+ V P + + I+V C ++ + L
Sbjct: 129 TIKLWNTLA-ECKFTIQED----GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANC 183
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG- 488
+K+ G G VSP G G+D + GK +L + D+I
Sbjct: 184 KLKNNHHG--HNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGK--NLYTLEHNDIINA 239
Query: 489 VTHHPHRN-LLATYGEDCTMKLW 510
+ P+R L YG ++K+W
Sbjct: 240 LCFSPNRYWLCVAYGP--SIKIW 260
Score = 202 (76.2 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DG + +S S+D + +WD +GK + F H + VL + FS D+ + SG
Sbjct: 73 SSDGNYALSGSWDQTLRLWDLAAGKTTR--------RFEGHTKDVLSVAFSADNRQIVSG 124
Query: 282 SQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W + +C + E H++ V+ + FS + S I+S +D T ++ L +
Sbjct: 125 SRDKTIKLWNTLA-ECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANC 183
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
KL GH+ Y+N + DGS + D +WDL L T +
Sbjct: 184 KLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE 232
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 45/170 (26%), Positives = 79/170 (46%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RDSEML 278
FS D + +VS S D I++W+ L+ + K +Q H + V C+ FS + ++
Sbjct: 114 FSADNRQIVSGSRDKTIKLWNTLA-ECKFTIQEDG------HTDWVSCVRFSPNHSNPII 166
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
S D +KVW + + + L+ H+ + ++ S DGS S DS A + L G
Sbjct: 167 VSCGWDRTVKVWNLANCK-LKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDG 225
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
K L H+ +N F+ + + A ++K+WDL ++ +P
Sbjct: 226 KNLYTLE-HNDIINALCFSPNRYWLCVAYGP-SIKIWDLACKKTVEELRP 273
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 46/178 (25%), Positives = 81/178 (45%)
Query: 211 GTKSHAECARFSPD--GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLC 268
G C RFSP+ +VSC +D ++VW+ + KLK + + H+ +
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNN--HHG------HNGYLNT 198
Query: 269 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
+ S D + SG +D K +W + G+ L LE H++ + +L FS + L ++
Sbjct: 199 VTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE--HNDIINALCFSPN-RYWLCVAYGP 255
Query: 329 TARIHGLKSGKLLKEFRGHS-SYVNDA--------IFTNDGSRVVTASSDCTVKVWDL 377
+ +I L K ++E R S + A ++ DG + SD T++VW +
Sbjct: 256 SIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 216 (81.1 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 52/161 (32%), Positives = 79/161 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SP + S S D +W + D Y + H V C++F +S LA+G
Sbjct: 411 SPYSLYFASGSHDRTARLWSF-------DRTYPL-RIYAGHLADVDCVKFHPNSNYLATG 462
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++W + G +R L H V SL FS +G + S D ++ L SG L
Sbjct: 463 STDKTVRLWSAQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 521
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
KE RGH+ + F+ D S + +AS D +V+VWD+++T C
Sbjct: 522 KELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 562
Score = 170 (64.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 43/155 (27%), Positives = 75/155 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + +C +F P+ +L + S D + +W G + F H VL +
Sbjct: 442 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR--------LFTGHRGPVLSLA 493
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D S I S S D++
Sbjct: 494 FSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSSLIASASMDNSV 552
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365
R+ +++ G S + ++T S V++
Sbjct: 553 RVWDIRNTYCSTPADGSSGELV-GVYTGQMSNVLS 586
Score = 158 (60.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 54/212 (25%), Positives = 97/212 (45%)
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
++ R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 354 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY 413
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
+ S D T ++W T L+ + G A V+ V P N +++ +
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDK 466
Query: 420 SIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
++ + + Q G V+ F+ G R G ++ SP G+++ GED+ L + SG L
Sbjct: 467 TVRLWSAQQGNSVRLFT-GHR--GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 523
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ H ++ +T P +L+A+ D ++++W
Sbjct: 524 LRGHTDNITSLTFSPDSSLIASASMDNSVRVW 555
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
RF D L+SCS D I WD G + YQ H V ++ S S A
Sbjct: 367 RFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG------HAYPVWDLDISPYSLYFA 418
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
SGS D ++W LR + H V + F + + + + S D T R+ + G
Sbjct: 419 SGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 477
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 478 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 517
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSP+G++L S D +++WD SG L K+L+ H + + + FS DS ++AS
Sbjct: 494 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRG--------HTDNITSLTFSPDSSLIAS 545
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
S D ++VW IR+ C + + E V V++ S +LS F
Sbjct: 546 ASMDNSVRVWDIRNTYCSTPADGSSGELVG--VYTGQMSNVLSVQF 589
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 60/242 (24%), Positives = 106/242 (43%)
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
E S DS++LA+G + IK+W +RS + L+ H V+ + + D IL D
Sbjct: 293 EISPDSKLLAAGFDNSCIKLWSLRSKK-LK--SEPHQVDVSRIHLACD---ILEEEDDED 346
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 388
+G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 347 DN-----AGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 401
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 448
P+ D ++ L+ + H ++T+ ++ + ++ ++ G D V
Sbjct: 402 AYPV--WDLDISPYSLYFASGSH----DRTARLWSFD-RTYPLRIYA-GHLADVDCVK-- 451
Query: 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 508
P ++ D+ + +S Q G L H V+ + P+ LA+ GED +K
Sbjct: 452 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 511
Query: 509 LW 510
LW
Sbjct: 512 LW 513
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/223 (23%), Positives = 86/223 (38%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V F DS L S S+D I+ W + S L + H+ V L S
Sbjct: 359 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPYSLYF 417
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
S S D TAR+ L+ + GH + V+ F + + + T S+D TV++W + +
Sbjct: 418 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 477
Query: 382 CLQTFKPPP-PLRGGDASVNSVHLFPKNPDH-IVVCNKTSSIYIMTLQGQVVKSFSSGKR 439
++ F P+ S N +L D + + + S L+G S
Sbjct: 478 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 537
Query: 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 482
+A+ ++ + RN YC + G L+ V+
Sbjct: 538 PDSSLIASASMDNSVRVWDI---RNTYCSTPADGSSGELVGVY 577
Score = 65 (27.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 175 GLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSPDGQ 226
GL P + + AA++ Q+ V+D P TT+ + T+ A SPD +
Sbjct: 240 GLEPTDMPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSK 299
Query: 227 FLVSCSFDGF-IEVWDYLSGKLKKDLQYQAD 256
L++ FD I++W S KLK + +Q D
Sbjct: 300 -LLAAGFDNSCIKLWSLRSKKLKSE-PHQVD 328
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 210 (79.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 71/298 (23%), Positives = 126/298 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F P+G L S FD I +W+ D A T H V+ +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-----DCDNYA--TLKGHSGAVMELH 117
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDST 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D T
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 177 VKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 389 -PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
+ G S +L D+ V + + + + V+ F +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTV---RVWDVRPFAPKERCVRIFQGNVHNFEKNLLR 291
Query: 448 CV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
C SP G I DR +Y + S ++ + + H + V HP ++ + D
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/222 (21%), Positives = 96/222 (43%)
Query: 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 349
R S Q L H V F +GS + S FD + + +GHS
Sbjct: 52 RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 165
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
+ + ++ + ++ + +++F + + +A + + I G D ++ +
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 55/170 (32%), Positives = 84/170 (49%)
Query: 214 SH-AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS 272
SH E S DGQF +S S+DG + +WD +G + F+ H + VL + FS
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV--------STRRFVGHTKDVLSVAFS 114
Query: 273 RDSEMLASGSQDGKIKVWRIRSGQCLRRLERA---HSEGVTSLVFSRDGSQ--ILSTSFD 327
D+ + S S+D IK+W G+C + H + V+ + FS + Q I+S S+D
Sbjct: 115 LDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 173
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T ++ L + KL GH+ YV+ + DGS + D V +WDL
Sbjct: 174 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Score = 177 (67.4 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 71/264 (26%), Positives = 111/264 (42%)
Query: 258 TFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRS-----GQCLRRLERAHSEGVTS 311
T H + V I D+ +++ S S+D I +W++ G RRL HS V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-GHSHFVED 68
Query: 312 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371
+V S DG LS S+D R+ L +G + F GH+ V F+ D ++V+AS D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT 128
Query: 372 VKVWDLKSTDCLQTFKPPPPLRGGDAS---VNSVHLFPKN-PDHIVVCNKTSSIYIMTLQ 427
+K+W+ +C T GG+ V+ V P IV + ++ + L
Sbjct: 129 IKLWNTLG-ECKYTIS-----EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 428 GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 487
++S +G G VSP G G+D + + GK L + VI
Sbjct: 183 NCKLRSTLAGHT--GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK--KLYSLEANSVI 238
Query: 488 -GVTHHPHRNLLATYGEDCTMKLW 510
+ P+R L E +K+W
Sbjct: 239 HALCFSPNRYWLCAATEH-GIKIW 261
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS--EML 278
FS D + +VS S D I++W+ L G+ K Y E H + V C+ FS ++ +
Sbjct: 113 FSLDNRQIVSASRDRTIKLWNTL-GECK----YTISEGGEGHRDWVSCVRFSPNTLQPTI 167
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
S S D +KVW + + + LR H+ V+++ S DGS S D + L G
Sbjct: 168 VSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 226
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
K L +S V A+ + + A+++ +K+WDL+S ++ K
Sbjct: 227 KKLYSLEANS--VIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 135 (52.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 58/226 (25%), Positives = 98/226 (43%)
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLKS-----GKLLKEFRGHS 348
G L+ RAH++ VT++ D + I+ S S D + + L G + GHS
Sbjct: 4 GLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS 63
Query: 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 408
+V D + ++DG ++ S D +++WDL + + F G V SV F +
Sbjct: 64 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV------GHTKDVLSV-AFSLD 116
Query: 409 PDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKG--EWIYCVGEDRN 464
IV ++ +I + G+ + S G D+V+ CV SP I D+
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS-CVRFSPNTLQPTIVSASWDKT 175
Query: 465 LYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ ++ + KL + H V V P +L A+ G+D + LW
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 211 (79.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 67/224 (29%), Positives = 113/224 (50%)
Query: 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
G + D+++ + +TI + + +FSP+GQ S +G I +++ +GKL
Sbjct: 2 GIPILSSDIQESDLYKIRYTINEPSITFT-AIKFSPNGQNFACSSSNGKIYIYNTTTGKL 60
Query: 248 KKDLQYQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS 306
T H + + I +S +S +LAS S D I++W I +C++ L R H+
Sbjct: 61 IT--------TLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLL-RKHT 111
Query: 307 EGVTSLVFSRDGSQILSTSFDSTARIHGLKS--GKLLKEFRGHSSYVNDAIFTNDGSRVV 364
+T+L F++ G+ ++S S D T I + S GK+L HS V+ T D S +V
Sbjct: 112 YHITTLKFTQKGNILISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIV 171
Query: 365 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA--SVNSVHLFP 406
+AS D ++++DL+++ CL+T G A S N V FP
Sbjct: 172 SASYDGLMRLFDLQTSQCLKTLTNSTFGGHGTATASTNDVINFP 215
>UNIPROTKB|B4DNJ6 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0016301 "kinase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0030054 "cell
junction" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005739 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0016301 HOGENOM:HOG000174258
HOVERGEN:HBG055228 OMA:LWQTTVG UniGene:Hs.504895 HGNC:HGNC:30796
ChiTaRS:STRAP EMBL:AC022073 EMBL:AK297942 IPI:IPI00294536
SMR:B4DNJ6 IntAct:B4DNJ6 STRING:B4DNJ6 Ensembl:ENST00000025399
UCSC:uc010shw.2 Uniprot:B4DNJ6
Length = 363
Score = 210 (79.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 79/298 (26%), Positives = 139/298 (46%)
Query: 222 SPDGQFLVS-CSFDGFIEVWDYLSGKLK-KDLQYQADE-----TFMMHDETVLCIEFSRD 274
+P G FL+S C G + LSG+ K + Q D TF+ H V ++D
Sbjct: 26 TPYGYFLISACKGAG--QHLPRLSGQHDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKD 83
Query: 275 SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHG 334
+ A+ + D KVW SG L L AH V ++ F++D + +L+ D RI+
Sbjct: 84 ATKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYD 141
Query: 335 LKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR 393
L + KE GH+S + A++ ++ ++++A D TV++WD + +++
Sbjct: 142 LNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLN------ 194
Query: 394 GGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
+ SV+S+ P+ + +V+ S + + +KSF + +A + P+
Sbjct: 195 -FNMSVSSMEYIPEG-EILVITYGRSIAFHSAVSLDPIKSFEAP----ATINSASLHPEK 248
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
E++ GED LY + + SG+ K H + V P L A+ ED T++LW+
Sbjct: 249 EFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 306
>MGI|MGI:1329037 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1329037 EMBL:AF096285 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005102
GO:GO:0005681 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
ChiTaRS:STRAP EMBL:AK075804 EMBL:AK077504 EMBL:AK145971
EMBL:AK152283 IPI:IPI00918973 RefSeq:NP_035629.2 UniGene:Mm.22584
ProteinModelPortal:Q9Z1Z2 SMR:Q9Z1Z2 STRING:Q9Z1Z2
PhosphoSite:Q9Z1Z2 REPRODUCTION-2DPAGE:IPI00130670
REPRODUCTION-2DPAGE:Q9Z1Z2 PaxDb:Q9Z1Z2 PRIDE:Q9Z1Z2
Ensembl:ENSMUST00000064910 GeneID:20901 KEGG:mmu:20901
NextBio:299765 Bgee:Q9Z1Z2 Genevestigator:Q9Z1Z2
GermOnline:ENSMUSG00000030224 Uniprot:Q9Z1Z2
Length = 350
Score = 209 (78.6 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 75/292 (25%), Positives = 134/292 (45%)
Query: 228 LVSCSFDGFIEVWDYLSGKLK--KDLQYQADE-----TFMMHDETVLCIEFSRDSEMLAS 280
+V +F G +L K K + Q D TF+ H V ++D+ A+
Sbjct: 17 VVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAAT 76
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
+ D KVW SG L L AH V ++ F++D + +L+ D RI+ L +
Sbjct: 77 AAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEA 134
Query: 341 L-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
KE GH+S + A++ +D ++++A D TV++WD + +++ + SV
Sbjct: 135 EPKEISGHTSGIKKALWCSDDKQILSAD-DKTVRLWDHATMTEVKSLN-------FNMSV 186
Query: 400 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459
+S+ P+ + +V+ S + + + +KSF + +A + P+ E++
Sbjct: 187 SSMEYIPEG-EILVITYGRSIAFHSAVSLEPIKSFEAP----ATINSASLHPEKEFLVAG 241
Query: 460 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
GED LY + + SG+ K H + V P L A+ ED T++LW+
Sbjct: 242 GEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 293
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 209 (78.6 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 79/305 (25%), Positives = 136/305 (44%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWD-YLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 276
C +S D + +VS S DG + VWD + + K + M V+ FS S+
Sbjct: 73 CMDWSLDKRHIVSSSQDGKVIVWDGFTTNK---------EHALTMPTTWVMACAFSPSSQ 123
Query: 277 MLASGSQDGKIKVWRIRSGQCLRRLER---AHSEGVTSLVFSRDGSQILSTSFDSTARIH 333
M+A G D K V + + + +R H+ ++ F R + IL+ S DST I
Sbjct: 124 MIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIW 183
Query: 334 GLKSGKLLKEFRGHSS--YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
++SG+L++ F GH+ + D + G+ ++A +D VWD++S C+Q+F+
Sbjct: 184 DVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFE---- 239
Query: 392 LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG--QVV---KSFSSGKREGGDF-V 445
G +A +N+V P N D + ++ + L+ QV K G DF +
Sbjct: 240 --GHEADINTVRFHP-NGDAFATGSDDATCRLFDLRADRQVCVYEKESILFPVNGVDFSL 296
Query: 446 AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 505
+ + G Y VG +L C H ++ HE + + P + + DC
Sbjct: 297 SGRILFAGYGDYRVGVWDSLKCARHS------VLYGHENRISCLRTSPDGTAVCSASWDC 350
Query: 506 TMKLW 510
T+++W
Sbjct: 351 TIRIW 355
Score = 180 (68.4 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 54/223 (24%), Positives = 98/223 (43%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D + T H + T CA FSP Q +++C G + + D+ Q
Sbjct: 94 VWDGFTTNKEHALTMPTTWVMACA-FSPSSQ-MIACG--GLDNKCSVVPLSFEDDI-IQK 148
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
H + C F R ++ +GS D +W + SGQ ++ H+ V ++
Sbjct: 149 KRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFH-GHTGDVFAIDVP 207
Query: 316 R-D-GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373
+ D G+ +S D + + ++SG+ ++ F GH + +N F +G T S D T +
Sbjct: 208 KCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCR 267
Query: 374 VWDLKSTDCLQTFKPPP---PLRGGDASVNSVHLFPKNPDHIV 413
++DL++ + ++ P+ G D S++ LF D+ V
Sbjct: 268 LFDLRADRQVCVYEKESILFPVNGVDFSLSGRILFAGYGDYRV 310
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 65/260 (25%), Positives = 105/260 (40%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H VLC+++S D + S SQDGK+ VW + L + V + FS I
Sbjct: 67 HVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMP-TTWVMACAFSPSSQMI 125
Query: 322 LSTSFDSTARIHGLK-SGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
D+ + L ++++ R H+SY++ F + ++T S D T +WD+
Sbjct: 126 ACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDV 185
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNKTSSIYIMTLQGQVVKSFSS 436
+S +Q F GD V I +K S ++ + GQ V+SF
Sbjct: 186 ESGQLIQNFHG----HTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIR-SGQCVQSFEG 240
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-----GVTH 491
+ D P G+ + G D + C + + + V+EK+ I GV
Sbjct: 241 HE---ADINTVRFHPNGD-AFATGSD-DATCRLFDL-RADRQVCVYEKESILFPVNGVDF 294
Query: 492 H-PHRNLLATYGEDCTMKLW 510
R L A YG D + +W
Sbjct: 295 SLSGRILFAGYG-DYRVGVW 313
>ZFIN|ZDB-GENE-060803-1 [details] [associations]
symbol:ahi1 "Abelson helper integration site 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007368 "determination of left/right symmetry" evidence=IMP]
[GO:0044458 "motile cilium assembly" evidence=IMP] Pfam:PF00018
InterPro:IPR017986 InterPro:IPR001452 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452 PROSITE:PS50002
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00326
ZFIN:ZDB-GENE-060803-1 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF50044 GO:GO:0007368
GO:GO:0044458 GeneTree:ENSGT00530000063479 EMBL:CR407704
EMBL:BX248131 IPI:IPI01024108 Ensembl:ENSDART00000148403
ArrayExpress:F8W3V6 Bgee:F8W3V6 Uniprot:F8W3V6
Length = 1193
Score = 219 (82.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 77/310 (24%), Positives = 142/310 (45%)
Query: 221 FSPDGQFLVS-CSF-DGF-IEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
FS DG+ L + C+ D F I +++ SGK+ +++D LC +SRD +
Sbjct: 554 FSHDGRALAAACADRDAFPIIIYEIPSGKVLSSFNGHLS---VVYD---LC--WSRDDKG 605
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLK 336
L + S DG ++VW + Q L H V F +++T +D R+ +
Sbjct: 606 LLTASSDGTVRVWNVERLQTLAHKTLPHPSFVYCAKFHPQAQSLVATGGYDGVLRVWNVD 665
Query: 337 ----SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK-----STDCLQTFK 387
+G+LL+EF GH +++N F +GSR+ +A + + VW K +
Sbjct: 666 VQDVNGQLLQEFDGHKTFINTLCFDPEGSRMFSADNSGLIIVWGTKVMPGSRRGATSQWS 725
Query: 388 PPPPLRGGDA---SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDF 444
++ D S+NS+ + P N +++ K S + +M L+ VK + G D
Sbjct: 726 IEREIKEADLNGISINSLEVHP-NGRRLLIHAKDSVLRVMDLRILAVKKYI-GATNYRDR 783
Query: 445 VAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK--VHEKDVIGVTHHPHRNLLA--T 500
+ + +P G +I+ ED Y ++ ++G + + + V HPH N++A
Sbjct: 784 INSTFTPCGSFIFAGSEDGLAYVWNSETGDQVAVYSELCYSSALRAVAFHPHENMVAFCC 843
Query: 501 YGEDCTMKLW 510
+G++ + L+
Sbjct: 844 FGQNQPIHLY 853
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 303 RAHSEGVTSLVFSRDGSQILSTSFDSTAR---IHGLKSGKLLKEFRGHSSYVNDAIFTND 359
R G +L FS DG + + D A I+ + SGK+L F GH S V D ++ D
Sbjct: 543 RGGQMGCFTLCFSHDGRALAAACADRDAFPIIIYEIPSGKVLSSFNGHLSVVYDLCWSRD 602
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391
++TASSD TV+VW+++ L P P
Sbjct: 603 DKGLLTASSDGTVRVWNVERLQTLAHKTLPHP 634
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 214 (80.4 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SP + S S D +W + D Y + H V C++F +S LA+G
Sbjct: 393 SPCSLYFASASHDRTARLWSF-------DRTYPL-RIYAGHLLDVDCVKFHPNSNYLATG 444
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++W + G +R L H V +L FS +G + S D ++ L SG L
Sbjct: 445 STDKTVRLWSTQQGNSVR-LFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
KE RGH+ + F+ D S + +AS D +V+VWD+++T C
Sbjct: 504 KELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 544
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 217 ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE 276
+C +F P+ +L + S D + +W G + F H VL + FS + +
Sbjct: 430 DCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVR--------LFTGHRGPVLALAFSPNGK 481
Query: 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336
LAS +D ++K+W + SG + L R H++ +TSL FS D S I S S D++ R+ ++
Sbjct: 482 YLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Query: 337 S 337
+
Sbjct: 541 N 541
Score = 167 (63.8 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 56/212 (26%), Positives = 98/212 (46%)
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
++ R H V S F D S +LS S D + R L+S ++GH+ V D +
Sbjct: 336 KILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPC 395
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
+AS D T ++W T L+ + G V+ V P N +++ +
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYA------GHLLDVDCVKFHP-NSNYLATGSTDK 448
Query: 420 SIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
++ + T QG V+ F+ G R G +A SP G+++ GED+ L + SG L
Sbjct: 449 TVRLWSTQQGNSVRLFT-GHR--GPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 505
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ H ++ +T P +L+A+ D ++++W
Sbjct: 506 LRGHTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 46/160 (28%), Positives = 68/160 (42%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
RF D L+SCS D I WD S + YQ H V ++ S S A
Sbjct: 349 RFLSDSSGLLSCSEDMSIRYWDLRS--FTNTVLYQG------HAYPVWDLDISPCSLYFA 400
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
S S D ++W LR + H V + F + + + + S D T R+ + G
Sbjct: 401 SASHDRTARLWSFDRTYPLR-IYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 459
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 460 SVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 57/244 (23%), Positives = 106/244 (43%)
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
E S +S++LA+G + +K+W +RS + L+ H V+ + + D IL +
Sbjct: 275 EISPNSKLLAAGFDNSCVKLWSLRSKK-LK--SEPHLVDVSRIRLACD---ILDEEEEED 328
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 388
+G +K RGH V F +D S +++ S D +++ WDL+S T+ +
Sbjct: 329 D-----SAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGH 383
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 448
P+ D ++ L+ + H ++T+ ++ +++ G C
Sbjct: 384 AYPV--WDLDISPCSLYFASASH----DRTARLWSFD------RTYPLRIYAGHLLDVDC 431
Query: 449 VS--PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 506
V P ++ D+ + +S Q G L H V+ + P+ LA+ GED
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQR 491
Query: 507 MKLW 510
+KLW
Sbjct: 492 LKLW 495
Score = 137 (53.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSP+G++L S D +++WD SG L K+L+ H + + + FS DS ++AS
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRG--------HTDNITSLTFSPDSSLIAS 527
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSE 307
S D ++VW IR+ C + + SE
Sbjct: 528 ASMDNSVRVWDIRNTYCNAPADGSSSE 554
Score = 115 (45.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 53/223 (23%), Positives = 86/223 (38%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V F DS L S S+D I+ W +RS L + H+ V L S
Sbjct: 341 HCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTV-LYQGHAYPVWDLDISPCSLYF 399
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
S S D TAR+ L+ + GH V+ F + + + T S+D TV++W + +
Sbjct: 400 ASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 459
Query: 382 CLQTFKPPP-PLRGGDASVNSVHLFPKNPDH-IVVCNKTSSIYIMTLQGQVVKSFSSGKR 439
++ F P+ S N +L D + + + S L+G S
Sbjct: 460 SVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 482
+A+ ++ + RN YC + G L+ V+
Sbjct: 520 PDSSLIASASMDNSVRVWDI---RNTYCNAPADGSSSELVGVY 559
Score = 62 (26.9 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 172 QHQGLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSP 223
+ GL P + + AA++ QD V+D P TT+ + T+ A SP
Sbjct: 219 ESNGLEPSEVPASILQNEAALELLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISP 278
Query: 224 DGQFLVSCSFDGF-IEVWDYLSGKLKKD 250
+ + L++ FD +++W S KLK +
Sbjct: 279 NSK-LLAAGFDNSCVKLWSLRSKKLKSE 305
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 211 (79.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 69/295 (23%), Positives = 136/295 (46%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
+FSP + L + D +++W+ K +++ + + + IEF L
Sbjct: 329 QFSPGSRLLATGGMDRRVKLWEVFGEKC----EFKG--SLSGSNAGITSIEFDSAGSYLL 382
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
+ S D ++W + + LR HS V S F D ++I+S S D T ++ L+S
Sbjct: 383 AASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 441
Query: 340 LLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
+K F G S ND + T V++ D ++ WD++S ++ + L G
Sbjct: 442 CIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRSESIVREME----LLG---K 490
Query: 399 VNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSS-GKREGGDFVAACVSPKGEWI 456
+ ++ L P+ + ++ C++ + ++ L+ +K +FS+ G + G D+ SP G ++
Sbjct: 491 ITALDLNPERTE-LLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYV 549
Query: 457 YCVGEDRNLYCFSHQSGKLEHLM-KVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ +LY +S +GK+E ++ K H + V P + + + + C LW
Sbjct: 550 AAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLW 604
Score = 209 (78.6 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 46/128 (35%), Positives = 72/128 (56%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 317
F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+ F
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 377
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 378 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 378 KSTDCLQT 385
+S C++T
Sbjct: 438 RSKVCIKT 445
Score = 154 (59.3 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 62/251 (24%), Positives = 107/251 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G+ + F G +L++ S D +W D Y+ T H VL +
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTV-------D-DYRLRHTLTGHSGKVLSAK 415
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 416 FLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKKI 471
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
R ++S +++E A+ N + + +++ S D +KV DL++ QTF P
Sbjct: 472 RFWDIRSESIVREMELLGKIT--ALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAP 529
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAAC 448
G D + V +F + ++ + S+YI + L G+V K S K+ A
Sbjct: 530 GFKCGSDWT--RV-VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLS--KQHSSSINAVA 584
Query: 449 VSPKGEWIYCV 459
SP G + V
Sbjct: 585 WSPSGSHVVSV 595
Score = 48 (22.0 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 55 RWDAILPQVAQLKLPRNKLE-DLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPER 113
RW + + QL+ R++L+ +E+I+L+ +L E ++L Q + K + P R
Sbjct: 12 RWKRHISE--QLRR-RDRLQRQAFEEIILQYNKLLEKSDLHSVL--AQKLQAEKHDVPNR 66
Query: 114 Y 114
+
Sbjct: 67 H 67
>UNIPROTKB|I3LNC4 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 OMA:LWQTTVG EMBL:FP325218
Ensembl:ENSSSCT00000023218 Uniprot:I3LNC4
Length = 363
Score = 209 (78.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 78/297 (26%), Positives = 136/297 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLK-KDLQYQADE-----TFMMHDETVLCIEFSRDS 275
+P G FL+S GF G+ K + Q D TF+ H V ++D+
Sbjct: 26 TPYGYFLISAC-KGFTVHLPRRPGQHHGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDA 84
Query: 276 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 335
A+ + D KVW SG L L AH V ++ F++D + +L+ D RI+ L
Sbjct: 85 TKAATAAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDL 142
Query: 336 KSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394
+ KE GHSS + A++ ++ ++++A D TV++WD + +++
Sbjct: 143 NKPEAEPKEISGHSSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLN------- 194
Query: 395 GDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGE 454
+ SV+S+ P+ + +V+ S + + +KSF + +A + P+ E
Sbjct: 195 FNMSVSSMEYIPEG-EILVITYGRSIAFHSAISLDPIKSFEAP----ATINSASLHPEKE 249
Query: 455 WIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
++ GED LY + + SG+ K H + V P L A+ ED T++LW+
Sbjct: 250 FLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 306
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 52/161 (32%), Positives = 78/161 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SP + S S D +W + D Y + H V C++F +S LA+G
Sbjct: 393 SPFSLYFASGSHDRTARLWSF-------DRTYPL-RIYAGHLADVDCVKFHPNSNYLATG 444
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++W + G +R L H V SL FS +G + S D ++ L SG L
Sbjct: 445 STDKTVRLWSAQQGNSVR-LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLF 503
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
KE RGH+ + F+ D + +AS D +V+VWD++ST C
Sbjct: 504 KELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCC 544
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 38/127 (29%), Positives = 64/127 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + +C +F P+ +L + S D + +W G + F H VL +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR--------LFTGHRGPVLSLS 475
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D I S S D++
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFKEL-RGHTDSITSLAFSPDSGLIASASMDNSV 534
Query: 331 RIHGLKS 337
R+ ++S
Sbjct: 535 RVWDIRS 541
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 55/187 (29%), Positives = 79/187 (42%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
RF D L+SCS D I WD G + YQ H V ++ S S A
Sbjct: 349 RFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG------HAYPVWDVDISPFSLYFA 400
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
SGS D ++W LR + H V + F + + + + S D T R+ + G
Sbjct: 401 SGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
++ F GH V F+ +G + +A D +K+WDL S FK LRG S+
Sbjct: 460 SVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL---FKE---LRGHTDSI 513
Query: 400 NSVHLFP 406
S+ P
Sbjct: 514 TSLAFSP 520
Score = 150 (57.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 53/212 (25%), Positives = 94/212 (44%)
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
++ R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPF 395
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
+ S D T ++W T L+ + G A V+ V P N +++ +
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDK 448
Query: 420 SIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
++ + + Q G V+ F+ G R G ++ SP G+++ GED+ L + SG L
Sbjct: 449 TVRLWSAQQGNSVRLFT-GHR--GPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKE 505
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ H + + P L+A+ D ++++W
Sbjct: 506 LRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSP+G++L S D +++WD SG L K+L+ H +++ + FS DS ++AS
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFKELRG--------HTDSITSLAFSPDSGLIAS 527
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
S D ++VW IRS C + + E V V++ S +LS F
Sbjct: 528 ASMDNSVRVWDIRSTCCNTPADGSSGELVG--VYTGQMSNVLSVQF 571
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 58/242 (23%), Positives = 106/242 (43%)
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
E S DS++LA+G + IK+W +RS + L+ H + + + D + D+T
Sbjct: 275 EISSDSKLLAAGFDNSCIKLWSLRSKK-LK--SEPHHVDTSRIRLACDTLEEEENEEDNT 331
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 388
G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 332 --------GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 448
P+ D ++ L+ + H ++T+ ++ + ++ ++ G D V
Sbjct: 384 AYPV--WDVDISPFSLYFASGSH----DRTARLWSFD-RTYPLRIYA-GHLADVDCVK-- 433
Query: 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 508
P ++ D+ + +S Q G L H V+ ++ P+ LA+ GED +K
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLK 493
Query: 509 LW 510
LW
Sbjct: 494 LW 495
Score = 59 (25.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 172 QHQGLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSP 223
++ L PP + + AA++ Q+ V+D P TT+ + T+ A S
Sbjct: 219 ENSSLEPPEVPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISS 278
Query: 224 DGQFLVSCSFDGF-IEVWDYLSGKLKKD 250
D + L++ FD I++W S KLK +
Sbjct: 279 DSK-LLAAGFDNSCIKLWSLRSKKLKSE 305
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 204 (76.9 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 72/285 (25%), Positives = 126/285 (44%)
Query: 244 SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER 303
+ +L KD++ + D + + FS D + LA+G++D I++W I + + + L+
Sbjct: 424 AAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ- 482
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRV 363
H + + SL + G +++S S D T RI L++G+ A+ DG +
Sbjct: 483 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 542
Query: 364 VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA-SVNSVHLFPKNPDHIVVCNKTSSIY 422
S D V+VWD ++ ++ G SV SV +F ++ +V + S+
Sbjct: 543 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV-VFTRDGQSVVSGSLDRSVK 601
Query: 423 IMTLQGQVVKSFSSGKREG-------G--DFVAACVSPKG-EWIYCVGEDRNLYCFSHQS 472
+ LQ KS S G G DFV + + + E+I +DR + + +S
Sbjct: 602 LWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS 661
Query: 473 GKLEHLMKVHEKDVIGVTHH------PHRNLLATYGEDCTMKLWK 511
G +++ H VI V P N+ AT DC ++WK
Sbjct: 662 GNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARIWK 706
Score = 156 (60.0 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 51/177 (28%), Positives = 81/177 (45%)
Query: 222 SP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
SP DG+++ + S D + VWD +G L + L + +E+ H ++V + F+RD + + S
Sbjct: 535 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE-NESGTGHKDSVYSVVFTRDGQSVVS 593
Query: 281 GSQDGKIKVWRIR------------SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
GS D +K+W ++ SG C H + V S+ +++ ILS S D
Sbjct: 594 GSLDRSVKLWNLQNANNKSDSKTPNSGTC-EVTYIGHKDFVLSVATTQNDEYILSGSKDR 652
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRV-------VTASSDCTVKVWDLK 378
KSG L +GH + V N GS + T S DC ++W K
Sbjct: 653 GVLFWDKKSGNPLLMLQGHRNSVISVAVAN-GSPLGPEYNVFATGSGDCKARIWKYK 708
Score = 143 (55.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 68/273 (24%), Positives = 118/273 (43%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE-----RAHSEGVT--SLVF 314
H V C++FS D E LA+G +V+R+ G + RL H +T +
Sbjct: 343 HTSVVCCVKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSDDSAANNHRNSITENNTTT 401
Query: 315 SRDGSQILSTS---FDSTARIHGLKSGKLLKEFRGHSS-----YVNDAIFTNDGSRVVTA 366
S D + + +T+ +TA + K ++ SS Y+ F+ DG + T
Sbjct: 402 STDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATG 461
Query: 367 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426
+ D +++WD+++ + L+G + + S+ FP D +V + ++ I L
Sbjct: 462 AEDRLIRIWDIENRKIVMI------LQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDL 514
Query: 427 Q-GQVVKSFSSGKREGGDFVAACVSP-KGEWIYCVGEDRNLYCFSHQSGKL-EHLMKVHE 483
+ GQ S + +G VA VSP G++I DR + + ++G L E L +E
Sbjct: 515 RTGQC--SLTLSIEDGVTTVA--VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE 570
Query: 484 -----KD-VIGVTHHPHRNLLATYGEDCTMKLW 510
KD V V + + D ++KLW
Sbjct: 571 SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 603
Score = 120 (47.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 57/293 (19%), Positives = 122/293 (41%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C +FS DG++L + + +V+ G L L + + T S D+
Sbjct: 349 CVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVARLSDDSAANNHRNSITENNTTTSTDNNT 407
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEG-------VTSLVFSRDGSQILSTSFDSTA 330
+ + + + + + +E ++ + S+ FS DG + + + D
Sbjct: 408 MTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLI 467
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
RI +++ K++ +GH + + G ++V+ S D TV++WDL++ C T
Sbjct: 468 RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS--- 524
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREG-G--DFVA 446
+ G V +V + P + +I + ++ + + G +V+ S G G D V
Sbjct: 525 -IEDG---VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 580
Query: 447 ACVSPK-GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 498
+ V + G+ + DR++ ++ Q+ + K VT+ H++ +
Sbjct: 581 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 633
Score = 114 (45.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 32/115 (27%), Positives = 57/115 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQ----ADETFMMHDETV 266
G K F+ DGQ +VS S D +++W+ + K D + + T++ H + V
Sbjct: 574 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 633
Query: 267 LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
L + +++ E + SGS+D + W +SG L L+ H V S+ + +GS +
Sbjct: 634 LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ-GHRNSVISVAVA-NGSPL 686
Score = 111 (44.1 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 44/173 (25%), Positives = 71/173 (41%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD--ETVLCIEFSRDSEML 278
+ P G LVS S D + +WD +G+ L + T + + S D +
Sbjct: 493 YFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 552
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK-- 336
S+ G + V R+ S H + V S+VF+RDG ++S S D + ++ L+
Sbjct: 553 VWDSETGFL-VERLDSEN---ESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 608
Query: 337 ----------SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
SG + GH +V T + +++ S D V WD KS
Sbjct: 609 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS 661
Score = 57 (25.1 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 20 ENSLQQTFQTLQNE-CQVS--LNT--VDSIETFVADINS--GRWDAILPQVAQLKLPRNK 72
+N L + ++ E QVS NT + + + + +N I V +L+L K
Sbjct: 9 QNKLNELLDAIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYELELTHRK 68
Query: 73 LEDLYEQIVLEM-IELRELDTARAILRQTQAMGVMKQEQPERYLR 116
++D YE+ + + + L + D A L Q +Q+Q +++L+
Sbjct: 69 MKDAYEEEIKHLKLGLEQRDHQIASLTVQQQRQQQQQQQVQQHLQ 113
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 205 (77.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 70/257 (27%), Positives = 119/257 (46%)
Query: 214 SH--AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 271
SH ++CA S D + +S S+D I +WD G + F+ H VL +
Sbjct: 63 SHFVSDCA-LSFDSHYALSASWDKTIRLWDLEKG--------ECTHQFVGHTSDVLSVSI 113
Query: 272 SRDSEMLASGSQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSR--DGSQILSTSFDS 328
S D+ + SGS+D IK+W I G C + + HS+ V+ + FS D +S +D
Sbjct: 114 SPDNRQVVSGSRDKTIKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDK 172
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ L++ L GH+ YV+ + DGS + D T+ +WDL + L + +
Sbjct: 173 AVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLE- 231
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQ------VVKSFSSGKREG 441
A++N++ +F +P+ +C T SSI I L+ Q V GK+
Sbjct: 232 ------AKANINAL-VF--SPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSS 282
Query: 442 G-DFVAACVSPKGEWIY 457
+ ++ SP G+ ++
Sbjct: 283 EPECISLTWSPDGQTLF 299
Score = 174 (66.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 63/228 (27%), Positives = 100/228 (43%)
Query: 276 EMLASGSQDGKIKVWR-IRS----GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
++L SGS+D I +W +R G RRL HS V+ S D LS S+D T
Sbjct: 29 DILLSGSRDKSIILWNLVRDDVNYGVAQRRLT-GHSHFVSDCALSFDSHYALSASWDKTI 87
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
R+ L+ G+ +F GH+S V + D +VV+ S D T+K+W++ +C T
Sbjct: 88 RLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIG-NCKYTITD-- 144
Query: 391 PLRGGDASVNSVHLFPKNPDHI--VVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 448
GG + S F NPD++ V ++ + L+ +++ G G A
Sbjct: 145 ---GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHT--GYVSAVT 199
Query: 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEK-DVIGVTHHPHR 495
+SP G G D L + HL + K ++ + P+R
Sbjct: 200 ISPDGSLCASGGRDGTLMLWDLNEST--HLYSLEAKANINALVFSPNR 245
Score = 151 (58.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 54/168 (32%), Positives = 78/168 (46%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQ-ADETFMMHDETVLCIEFSRDSEMLAS 280
+PD L+S S D I +W+ + + D+ Y A H V S DS S
Sbjct: 27 NPD--ILLSGSRDKSIILWNLV----RDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALS 80
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-K 339
S D I++W + G+C + H+ V S+ S D Q++S S D T +I + K
Sbjct: 81 ASWDKTIRLWDLEKGECTHQFV-GHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCK 139
Query: 340 LLKEFRGHSSYVNDAIFT-N-DGSRVVTASSDCTVKVWDLKSTDCLQT 385
GHS +V+ F+ N D V+A D VKVWDL+ T L+T
Sbjct: 140 YTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLE-TFSLRT 186
Score = 151 (58.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 63/223 (28%), Positives = 99/223 (44%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGL-----KSGKLLKEFRGHSSYV 351
LR HS VTSL + + IL S S D + + L G + GHS +V
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411
+D + D ++AS D T+++WDL+ +C F G + V SV + P N
Sbjct: 67 SDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFV------GHTSDVLSVSISPDNRQ- 119
Query: 412 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV--SPKGEWIYCV--GEDRNLYC 467
+V ++ +I I + G + + G D+V+ CV SP + + V G D+ +
Sbjct: 120 VVSGSRDKTIKIWNIIGNCKYTITDGGHS--DWVS-CVRFSPNPDNLTFVSAGWDKAVKV 176
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ ++ L H V VT P +L A+ G D T+ LW
Sbjct: 177 WDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLW 219
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 43/173 (24%), Positives = 78/173 (45%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S SPD + +VS S D I++W+ + G K + T H + V C+
Sbjct: 103 GHTSDVLSVSISPDNRQVVSGSRDKTIKIWNII-GNCKYTI------TDGGHSDWVSCVR 155
Query: 271 FSRDSEMLA--SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
FS + + L S D +KVW + + LR H+ V+++ S DGS S D
Sbjct: 156 FSPNPDNLTFVSAGWDKAVKVWDLETFS-LRTSHYGHTGYVSAVTISPDGSLCASGGRDG 214
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
T + L L ++ +N +F+ + + A+ +++++DL++ +
Sbjct: 215 TLMLWDLNESTHLYSLEAKAN-INALVFSPNRYWLCAATGS-SIRIFDLETQE 265
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 207 (77.9 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 52/194 (26%), Positives = 92/194 (47%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
CA+FSPDG+ +VSCS D I++WD + K+ + +D + ++F+
Sbjct: 19 CAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSDSVGFAN-----FVDFNPSGTC 70
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
+AS D +KVW +R + L+ + HS GV + F G+ +++ S D T +I L
Sbjct: 71 IASAGSDQTVKVWDVRVNKLLQHYQ-VHSGGVNCISFHPSGNYLITASSDGTLKILDLLE 129
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW--DLKSTDCLQTFKPPPPLRGG 395
G+L+ +GH+ V F+ G + +D V +W + C K
Sbjct: 130 GRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHF 189
Query: 396 DASVNSVHLFPKNP 409
D+ + + ++P+ P
Sbjct: 190 DSPPHLLDIYPRTP 203
Score = 178 (67.7 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 41/117 (35%), Positives = 64/117 (54%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGSQ 320
H V C +FS D ++ S S+D IK+W + QC+ + S G + V F+ G+
Sbjct: 13 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF--SDSVGFANFVDFNPSGTC 70
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
I S D T ++ ++ KLL+ ++ HS VN F G+ ++TASSD T+K+ DL
Sbjct: 71 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 127
Score = 143 (55.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 53/208 (25%), Positives = 87/208 (41%)
Query: 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364
H+ V FS DG I+S S D T +I + + + F + N F G+ +
Sbjct: 13 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 72
Query: 365 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 424
+A SD TVKVWD++ LQ ++ GG VN + P ++++ + ++ I+
Sbjct: 73 SAGSDQTVKVWDVRVNKLLQHYQVHS---GG---VNCISFHPSG-NYLITASSDGTLKIL 125
Query: 425 ---------TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKL 475
TLQG F+ +GG+ A+ + ++ D L+C L
Sbjct: 126 DLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDE-LHCKGLTKRNL 184
Query: 476 EHL---MKVHEKDVIGVTHHPHRNLLAT 500
+ L H D+ T HPH + T
Sbjct: 185 KRLHFDSPPHLLDIYPRTPHPHEEKVET 212
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 215 (80.7 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 71/246 (28%), Positives = 117/246 (47%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDY---LSGKLKKDL-----QYQA 255
L H G S C+R F+V+ S D I+VW+ L+ K K L A
Sbjct: 428 LGHAHGVGAVS---CSRLKES--FVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHA 482
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
T HD+ + + S + +++A+GSQD K+W L + H G+ + FS
Sbjct: 483 QMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLG-VFTGHKRGIWCVQFS 541
Query: 316 RDGSQILSTSF-DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
QIL+TS D T ++ GL+ LK F GH + V IF + G+++++ SD +K+
Sbjct: 542 -PVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKL 600
Query: 375 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSF 434
W +K+ +C++T L G + + +H K D +V + SSI + ++ +
Sbjct: 601 WTIKTNECVKT------LDGHEDKIWGLHT-NKQDDMVVTASSDSSITLWKDVTEIEQEE 653
Query: 435 SSGKRE 440
+ KRE
Sbjct: 654 AQAKRE 659
Score = 188 (71.2 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 65/236 (27%), Positives = 108/236 (45%)
Query: 193 KQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ 252
K +V D+ L H+++ + SPD + LV+ S ++ W++ + +
Sbjct: 47 KLNVIDVETGALLHSLEQDDQEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRT-- 104
Query: 253 YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSL 312
++A +H V + F S +LA+G D IK+W + C L+ S GV L
Sbjct: 105 WKA-----VHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKG--SSGVVHL 157
Query: 313 V-FSRDGS--QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369
V F D S Q+ S+S D RI L S K + GH S V FT DG+ ++++ D
Sbjct: 158 VEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRD 217
Query: 370 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 425
VW+LK+ + ++T P+ SV + L P+ D + K ++ +T
Sbjct: 218 KICMVWNLKTRESIRTI----PIY---ESVEAAVLLPEQGDFSQLGVKKQGLHFLT 266
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DG+F+ C + V D +G L L+ Q D+ E + S D E+L +G
Sbjct: 34 SRDGKFMF-CPCGTKLNVIDVETGALLHSLE-QDDQ------EDITSFVLSPDDEVLVTG 85
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S+ +K W R +C+R + H V ++VF + + + DST +I +
Sbjct: 86 SRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCT 145
Query: 342 KEFRGHSSYVNDAIFTNDGSRV--VTASSDCTVKVWDLKSTDCL 383
+G S V+ F D SR+ ++S D +++WDL S+ C+
Sbjct: 146 HNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCV 189
Score = 144 (55.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 59/229 (25%), Positives = 108/229 (47%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD-SEM-L 278
F L + D I++WD + +L+ + ++H +EF D S + L
Sbjct: 118 FDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSG---VVH-----LVEFHPDISRLQL 169
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
S S D KI++W + S +C+ L+ H VTSL F+ DG+ ++S+ D + LK+
Sbjct: 170 FSSSMDYKIRIWDLNSSKCVAVLD-GHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTR 228
Query: 339 KLLKEFRGHSSYVNDAI-------FTN-----DGSRVVTASSDCTVKVWDLKSTDCLQTF 386
+ ++ + S V A+ F+ G +TA S +KVW++ + C+ +
Sbjct: 229 ESIRTIPIYES-VEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACVYS- 286
Query: 387 KPPP--PLRGGD-ASVNSV-H--LFPKNPDHIVVCNKTSSIYI--MTLQ 427
+P P P+ + AS +S+ H L P+ + + V + + ++ TLQ
Sbjct: 287 QPVPFEPVESEEEASEHSLTHCMLVPERNEIVTVSVEHNIVFYDAQTLQ 335
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 57/191 (29%), Positives = 84/191 (43%)
Query: 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE-MLASGSQ 283
G VSC+ D I VW ++ KD + + H V + SR E + + SQ
Sbjct: 398 GLMFVSCAKDKSIRVW-----RMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQ 452
Query: 284 DGKIKVWRIR------------SG-QCL--RRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
D IKVW I SG + L + ER H + + S+ S + I + S D
Sbjct: 453 DCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDR 512
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
A++ LL F GH + F+ + T+S+D T+K+W L+ CL+TF+
Sbjct: 513 LAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFE- 571
Query: 389 PPPLRGGDASV 399
G DASV
Sbjct: 572 -----GHDASV 577
Score = 121 (47.7 bits), Expect = 0.00072, P = 0.00072
Identities = 65/274 (23%), Positives = 113/274 (41%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRI-RSGQ--CLRR-LERAHSEGVTSLVFSRD 317
H ET+L ++ R M S ++D I+VWR+ + G+ C+ + L AH G S ++
Sbjct: 385 HTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKE 444
Query: 318 GSQILSTSFDSTARIHGLK------------SGK--LLKEF--RGHSSYVND-AIFTNDG 360
S ++++S D T ++ + SG L + RGH +N A+ ND
Sbjct: 445 -SFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPND- 502
Query: 361 SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 420
+ T S D K+W L F G + V P D I+ +
Sbjct: 503 KLIATGSQDRLAKLWSCPDCSLLGVFT------GHKRGIWCVQFSPV--DQILATSSADG 554
Query: 421 IYIMTLQGQVVKSFSSGKR-EGGD--FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
+ L G ++ FS K EG D + +G + G D L ++ ++ +
Sbjct: 555 T--LKLWG--LQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVK 610
Query: 478 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ HE + G+ + +++ T D ++ LWK
Sbjct: 611 TLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWK 644
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 189 (71.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 54/170 (31%), Positives = 81/170 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF +KS A+ F P +++ I++WDY G L + F HD V
Sbjct: 4 KFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLI--------DRFEEHDGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I+F + SG D KIKVW ++ +CL L H + V ++ F + ILS S D
Sbjct: 56 GIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLN-GHLDYVRTVFFHPELPWILSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T RI ++ L+ GH+ YV A F + +AS D +V++WD+
Sbjct: 115 QTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDI 164
Score = 78 (32.5 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDR--NLYCFSHQSGKLEHLMKVHEKDVI 487
VVK G G ++VA P I G+DR L+ S + H ++
Sbjct: 200 VVKFVLEGHDRGVNWVA--FHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNAS 257
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
HPH++L+ + GED T++ W
Sbjct: 258 ACLFHPHQDLILSVGEDKTIRAW 280
Score = 67 (28.6 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
F + ++ +++ H++ V V HP L+ + G+D +KLW+
Sbjct: 194 FGNTDAVVKFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWR 237
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 213 (80.0 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 54/182 (29%), Positives = 89/182 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + E + S + +V+ S G I VWD + K+ + T + H + ++
Sbjct: 61 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILR--------TLLGHKANICSLD 112
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F +ASGS D IK+W +R C+ + ++H++ V L FS DG + S + D T
Sbjct: 113 FHPYGSFVASGSLDTDIKLWDVRRKGCIFKY-KSHTQAVRCLRFSPDGKWLASAADDHTV 171
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS---TDCLQTFK 387
++ L +GK++ EF GHS VN F + + SSD T++ WDL+ C++
Sbjct: 172 KLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEA 231
Query: 388 PP 389
P
Sbjct: 232 TP 233
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 33/132 (25%), Positives = 63/132 (47%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + + +LA+G D ++ VW + C+ L H+ + SL S
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT-GHTTPIESLQIS 72
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F GS V + S D +K+W
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
Query: 376 DLKSTDCLQTFK 387
D++ C+ +K
Sbjct: 133 DVRRKGCIFKYK 144
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 48/212 (22%), Positives = 90/212 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDST-ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AHS V+SLV + ++L+T D + + + GH++ + +
Sbjct: 18 AHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEEL 77
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + + I
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT------LLGHKANICSLDFHPYG-SFVASGSLDTDIK 130
Query: 423 IMTLQ--GQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
+ ++ G + K + S + C+ SP G+W+ +D + + +GK+
Sbjct: 131 LWDVRRKGCIFK-YKSHTQ-----AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE 184
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H V V HP LLA+ D T++ W
Sbjct: 185 FTGHSGPVNVVEFHPSEYLLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 54/230 (23%), Positives = 99/230 (43%)
Query: 153 SVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGT 212
SV P+ +M+L G + Q + + + G+ + V D+ + T+ G
Sbjct: 49 SVNKPNCVMSLTGHTTPIESLQ--ISAKEEL-IVAGSQSGSIRVWDLEAAKILRTL-LGH 104
Query: 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS 272
K++ F P G F+ S S D I++WD +K ++ + H + V C+ FS
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVR----RKGCIFK----YKSHTQAVRCLRFS 156
Query: 273 RDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI 332
D + LAS + D +K+W + +G+ + HS V + F + S S D T R
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKVMFEFT-GHSGPVNVVEFHPSEYLLASGSSDRTIRF 215
Query: 333 HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
L+ ++ ++ V +F DG + D +++V+ + C
Sbjct: 216 WDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEPERC 264
>FB|FBgn0034876 [details] [associations]
symbol:wmd "wing morphogenesis defect" species:7227
"Drosophila melanogaster" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007476 GeneTree:ENSGT00630000089849 KO:K13137 OMA:LWQTTVG
EMBL:AY061000 RefSeq:NP_001097436.1 RefSeq:NP_611804.1
UniGene:Dm.3756 SMR:Q9W1N4 STRING:Q9W1N4 EnsemblMetazoa:FBtr0072114
EnsemblMetazoa:FBtr0113112 GeneID:37727 KEGG:dme:Dmel_CG3957
UCSC:CG3957-RA CTD:37727 FlyBase:FBgn0034876 InParanoid:Q9W1N4
OrthoDB:EOG4QBZMZ ChiTaRS:wmd GenomeRNAi:37727 NextBio:805102
Uniprot:Q9W1N4
Length = 328
Score = 205 (77.2 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 66/255 (25%), Positives = 114/255 (44%)
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
TF H V +R++ + ASG+ D KVW +G + + H V S+ F RD
Sbjct: 57 TFEGHKGAVWNATLNRNATLAASGAADFTGKVWNAVTGAEIHSFQHKHI--VKSVAFDRD 114
Query: 318 GSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
I++ S + R+ L+ + +E+ GH+ + A+F +++A+ D TV++WD
Sbjct: 115 SENIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCIISAAEDKTVRLWD 174
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 436
+ +Q + +++ NS+ + N HI+ + SSI + +K
Sbjct: 175 RMTGIEVQRLQ-------FNSNPNSLEISSDN--HILTISHGSSISFWEID--TLKKLKE 223
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
K + +A + P C GED +Y F + +G K H V V P
Sbjct: 224 VKVPT-NVASASLHPDKHVFVCGGEDFKMYKFDYITGNEIESFKGHFGPVHSVKFSPDGE 282
Query: 497 LLATYGEDCTMKLWK 511
L A+ ED T++LW+
Sbjct: 283 LYASGSEDGTLRLWQ 297
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 56/230 (24%), Positives = 99/230 (43%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V + F RDSE + +GS + ++V+ + + H+ + +F R I
Sbjct: 102 HKHIVKSVAFDRDSENIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCI 161
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
+S + D T R+ +G ++ + +S+ N ++D + ++T S ++ W++ +
Sbjct: 162 ISAAEDKTVRLWDRMTGIEVQRLQFNSN-PNSLEISSD-NHILTISHGSSISFWEIDTLK 219
Query: 382 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYIMT-LQGQVVKSFSSGKR 439
L+ K P +V S L P H+ VC + +Y + G ++SF K
Sbjct: 220 KLKEVKVP-------TNVASASLHPDK--HVFVCGGEDFKMYKFDYITGNEIESF---KG 267
Query: 440 EGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKDVIG 488
G + SP GE +Y G ED L + GK L K E +G
Sbjct: 268 HFGPVHSVKFSPDGE-LYASGSEDGTLRLWQTTVGKTYGLWKCTEPADLG 316
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 150 (57.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 287 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 346
IK+W + +C+R + H V+S+ +G I+S S D T ++ +++G +K F G
Sbjct: 3 IKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 347 HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
H +V DG+ + + S+D TV+VW + + +C
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 97
Score = 130 (50.8 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/129 (25%), Positives = 65/129 (50%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H E V + ++D ++AS S D ++VW + + +C L R H V + ++
Sbjct: 57 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL-REHEHVVECISWAP 115
Query: 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ +S+ S + G + G H ++V +F + G +++ + D T++VWD
Sbjct: 116 E------SSYSSISEATGSEVG--------HDNWVRGVLFHSGGKFILSCADDKTLRVWD 161
Query: 377 LKSTDCLQT 385
K+ C++T
Sbjct: 162 YKNKRCMKT 170
Score = 119 (46.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 250 DLQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG 308
D Q ++ T HD V + + + + S S+D IK+W +++G C++ H E
Sbjct: 7 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 65
Query: 309 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 351
V + ++DG+ I S S D T R+ + + + E R H V
Sbjct: 66 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 108
Score = 113 (44.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 302 ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS 361
E H V ++F G ILS + D T R+ K+ + +K H +V F
Sbjct: 129 EVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 188
Query: 362 RVVTASSDCTVKVWDLK 378
VVT S D TVKVW+ +
Sbjct: 189 YVVTGSVDQTVKVWECR 205
Score = 104 (41.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 371 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQ 429
T+K+WD + +C++T + G D +V+SV + P N DHIV ++ +I + +Q G
Sbjct: 2 TIKLWDFQGFECIRT------MHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGY 54
Query: 430 VVKSFSSGKRE 440
VK+F+ G RE
Sbjct: 55 CVKTFT-GHRE 64
Score = 103 (41.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282
P+G +VS S D I++W+ +G K TF H E V + ++D ++AS S
Sbjct: 31 PNGDHIVSASRDKTIKMWEVQTGYCVK--------TFTGHREWVRMVRPNQDGTLIASCS 82
Query: 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS 319
D ++VW + + +C L R H V + ++ + S
Sbjct: 83 NDQTVRVWVVATKECKAEL-REHEHVVECISWAPESS 118
Score = 90 (36.7 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
T ++ + + ++ GH V+ +G +V+AS D T+K+W++++ C++TF
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 59
Score = 66 (28.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 190 AAMKQDVEDMYPTTLSHTIKFGTKSHAECARF---SPDGQFLVSCSFDGFIEVWDYLSGK 246
+A + M+ + +K T H E R + DG + SCS D + VW + +
Sbjct: 38 SASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 96
Query: 247 LKKDLQYQADETFMMHDETVLCIEFSRDSEML----ASGSQDG 285
K +L+ H+ V CI ++ +S A+GS+ G
Sbjct: 97 CKAELRE--------HEHVVECISWAPESSYSSISEATGSEVG 131
Score = 62 (26.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 453 GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
G++I +D+ L + +++ + + HE V + H + T D T+K+W+
Sbjct: 145 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 44 (20.5 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 482 HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H+ V GV H + + +D T+++W
Sbjct: 132 HDNWVRGVLFHSGGKFILSCADDKTLRVW 160
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 206 (77.6 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSR-DSEM 277
A F+PDG + +CS D + WD +G Q F H V ++ SR ++
Sbjct: 104 AHFTPDGSHIFTCSTDKTLAFWDIATG--------QRQRRFKGHGNFVNSVQGSRRGQQL 155
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
L SGS D IK+W R LE VT++ F G Q++S D+ +I ++
Sbjct: 156 LCSGSDDRTIKIWDARKKHAAHTLESPFQ--VTAVCFGDTGEQVISGGIDNEVKIWDIRK 213
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
+L RGHS + + +G ++T + D T++VWD++
Sbjct: 214 QAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVR 254
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 58/192 (30%), Positives = 93/192 (48%)
Query: 226 QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285
Q L S S D I++WD KK + + F + T +C F E + SG D
Sbjct: 154 QLLCSGSDDRTIKIWD----ARKKHAAHTLESPFQV---TAVC--FGDTGEQVISGGIDN 204
Query: 286 KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS---G-KLL 341
++K+W IR L L R HS+ +T + S +G IL+ + D+T R+ ++ G + +
Sbjct: 205 EVKIWDIRKQAVLHHL-RGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCV 263
Query: 342 KEFRGHSSYVNDAIFT---NDGS-RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
K F+GH + + GS ++ + S+D V +WD+ + L +K P G +
Sbjct: 264 KVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRIL--YKLP----GHNG 317
Query: 398 SVNSVHLFPKNP 409
SVN+V PK P
Sbjct: 318 SVNAVDFSPKEP 329
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/240 (23%), Positives = 104/240 (43%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA-HSEGVTSLVFSRDGSQ 320
H+ + EF + E+L S D +I +W++ C + + HS V F+ DGS
Sbjct: 54 HEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEAHFTPDGSH 112
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLKS 379
I + S D T + +G+ + F+GH ++VN + G +++ + S D T+K+WD +
Sbjct: 113 IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK 172
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKR 439
T + P V +V F + ++ + + I ++ Q V G
Sbjct: 173 KHAAHTLESP-------FQVTAV-CFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS 224
Query: 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS-GKLEHLMKVHEKDVIGVTHHPHRNLL 498
+ +SP+G++I D L + + E +KV + G H+ +NLL
Sbjct: 225 D--TITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQ----GHQHNFEKNLL 278
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 59/242 (24%), Positives = 103/242 (42%)
Query: 272 SRDSEMLASGSQDGKIKVWRIRSGQC-LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
+RD +L SG V R + Q + +LE H + + F +G +LS+ FD
Sbjct: 28 NRDKALLESG-------VRRTSNLQAPIMQLE-GHEGEIFTAEFHPEGELLLSSGFDRQI 79
Query: 331 RIHGL-KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
I + + + + GHS V +A FT DGS + T S+D T+ WD+ + + FK
Sbjct: 80 YIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFK-- 137
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG-DFVAAC 448
G VNSV + ++C+ + I + K ++ E A C
Sbjct: 138 ----GHGNFVNSVQGSRRGQQ--LLCSGSDDRTIKIWDAR--KKHAAHTLESPFQVTAVC 189
Query: 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 508
GE + G D + + + + H ++ H + G++ P + + T D T++
Sbjct: 190 FGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLR 249
Query: 509 LW 510
+W
Sbjct: 250 VW 251
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 212 (79.7 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 51/161 (31%), Positives = 78/161 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SP + S S D +W + D Y + H V C++F +S LA+G
Sbjct: 393 SPYSLYFASGSHDRTARLWSF-------DRTYPL-RIYAGHLADVDCVKFHPNSNYLATG 444
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++W + G +R L H V SL FS +G + S D ++ L SG L
Sbjct: 445 STDKTVRLWSAQQGNSVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
KE RGH+ + F+ D + +AS D +V+VWD+++T C
Sbjct: 504 KELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYC 544
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 43/155 (27%), Positives = 75/155 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + +C +F P+ +L + S D + +W G + F H VL +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR--------LFTGHRGPVLSLA 475
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS + + LAS +D ++K+W + SG + L R H++ +TSL FS D I S S D++
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDNITSLTFSPDSGLIASASMDNSV 534
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365
R+ +++ G SS + ++T S V++
Sbjct: 535 RVWDIRNTYCSAPADGSSSELV-GVYTGQMSNVLS 568
Score = 157 (60.3 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 54/212 (25%), Positives = 96/212 (45%)
Query: 300 RLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359
++ R H V S F D S +LS S D + R L S ++GH+ V D +
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPY 395
Query: 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419
+ S D T ++W T L+ + G A V+ V P N +++ +
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYA------GHLADVDCVKFHP-NSNYLATGSTDK 448
Query: 420 SIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
++ + + Q G V+ F+ G R G ++ SP G+++ GED+ L + SG L
Sbjct: 449 TVRLWSAQQGNSVRLFT-GHR--GPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 505
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ H ++ +T P L+A+ D ++++W
Sbjct: 506 LRGHTDNITSLTFSPDSGLIASASMDNSVRVW 537
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 47/160 (29%), Positives = 69/160 (43%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
RF D L+SCS D I WD G + YQ H V ++ S S A
Sbjct: 349 RFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQG------HAYPVWDLDISPYSLYFA 400
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
SGS D ++W LR + H V + F + + + + S D T R+ + G
Sbjct: 401 SGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 499
Score = 147 (56.8 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSP+G++L S D +++WD SG L K+L+ H + + + FS DS ++AS
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRG--------HTDNITSLTFSPDSGLIAS 527
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
S D ++VW IR+ C + + SE V V++ S +LS F
Sbjct: 528 ASMDNSVRVWDIRNTYCSAPADGSSSELVG--VYTGQMSNVLSVQF 571
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 60/242 (24%), Positives = 106/242 (43%)
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
E S DS++LA+G + IK+W +RS + L+ H V+ + + D IL D
Sbjct: 275 EISPDSKLLAAGFDNSCIKLWSLRSKK-LK--SEPHQVDVSRIHLACD---ILEEEDDED 328
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP 388
+G +K RGH V F D S +++ S D +++ WDL S T+ +
Sbjct: 329 DN-----AGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 448
P+ D ++ L+ + H ++T+ ++ + ++ ++ G D V
Sbjct: 384 AYPV--WDLDISPYSLYFASGSH----DRTARLWSFD-RTYPLRIYA-GHLADVDCVK-- 433
Query: 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 508
P ++ D+ + +S Q G L H V+ + P+ LA+ GED +K
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 493
Query: 509 LW 510
LW
Sbjct: 494 LW 495
Score = 109 (43.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 52/223 (23%), Positives = 86/223 (38%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V F DS L S S+D I+ W + S L + H+ V L S
Sbjct: 341 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPYSLYF 399
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
S S D TAR+ L+ + GH + V+ F + + + T S+D TV++W + +
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 382 CLQTFKPPP-PLRGGDASVNSVHLFPKNPDH-IVVCNKTSSIYIMTLQGQVVKSFSSGKR 439
++ F P+ S N +L D + + + S L+G S
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 482
+A+ ++ + RN YC + G L+ V+
Sbjct: 520 PDSGLIASASMDNSVRVWDI---RNTYCSAPADGSSSELVGVY 559
Score = 76 (31.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 172 QHQGLLPPGTQFDLFRGTAAMK--QD----VEDMYP--TTLSHTIKFGTKSHAECARFSP 223
++ GL PP + + AA++ Q+ V+D P TT+ + T+ A SP
Sbjct: 219 ENNGLEPPDMPSPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISP 278
Query: 224 DGQFLVSCSFDGF-IEVWDYLSGKLKKDLQYQAD 256
D + L++ FD I++W S KLK + +Q D
Sbjct: 279 DSK-LLAAGFDNSCIKLWSLRSKKLKSE-PHQVD 310
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 212 (79.7 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 109/521 (20%), Positives = 217/521 (41%)
Query: 5 IEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQVA 64
I + ++I+ + +T L+ E +SL+ +I+ F+ + G+WD + +
Sbjct: 63 IRKSEFVRIITRALYSLGYDKTGAMLEEESGISLHN-STIKLFLQQVKDGKWDQSVKTLH 121
Query: 65 QLKLPRNKLED-----LYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH 119
++ P K L EQ LE +++ ++ A LR M ++ +
Sbjct: 122 RIGFPDEKAVKAASFLLLEQKFLEFLKVEKIADALRTLRNE--MAPLRINTKRVHELASS 179
Query: 120 LLVRTYFDAHEAY---QDSTKEXXXXXXXXXXXXEVSVV-PPSRLMALIGQALKWQQHQG 175
L+ + F +H ++S SV+ P RL L+ +L Q+
Sbjct: 180 LISPSSFISHTTSTPGKESVNSRSKVLEELQTLLPASVIIPEKRLECLVENSLHIQRDSC 239
Query: 176 LLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDG 235
+ DL + Q + P+ + ++ T +FS +G++L S S D
Sbjct: 240 VFHNTLDSDL--SLYSDHQCGKHQIPSQTAQILESHT-DEVWFLQFSHNGKYLASSSKDQ 296
Query: 236 FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRS 294
+W+ + D T + H + V+ I +S D ++L G+++ I+ W + S
Sbjct: 297 TAIIWE-----ISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEE-VIRRWDVDS 350
Query: 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY-VND 353
G C+ E+ + S + DG I++ D + + L G+ + ++G + V+D
Sbjct: 351 GDCVHMYEKGGISPI-SCGWYPDGQGIIAGMTDRSICMWDL-DGREKECWKGQRTQKVSD 408
Query: 354 AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 413
T+DG +V+ D + ++D ++T L + + S L N +I+
Sbjct: 409 IAMTDDGKWLVSVCKDSVISLFDREAT--------VERLIEEEDMITSFSLSNDNK-YIL 459
Query: 414 VCNKTSSIYIMTLQG--QVVKSFSSGKREGGDFVAACVSP-KGEWIYCVGEDRNLYCFSH 470
V I + ++G ++V + KR + +C K +I ED +Y +
Sbjct: 460 VNLLNQEIRLWNIEGDPKIVSRYKGHKRSRF-IIRSCFGGYKQAFIASGSEDSQVYIWHR 518
Query: 471 QSGKLEHLMKVHEKDVIGVTHHP-HRNLLATYGEDCTMKLW 510
+GKL + H V V+ P + ++LA+ +D T+++W
Sbjct: 519 STGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 215 (80.7 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 76/296 (25%), Positives = 132/296 (44%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADET--FMMHDETVLCIEFSRDSEM 277
+FSP+ + LV+ S+ G ++W L + L+ H + L +E S D M
Sbjct: 223 QFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEES-DVNM 281
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
AS + DG +K+W + S + + +E HS V + + G + +T +D + R+ L+
Sbjct: 282 -ASCAADGSVKLWSLDSDEPIADIE-GHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEV 339
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ + GHS V+D F DGS T D +VWDL++ C+ F L G
Sbjct: 340 QEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVM-F-----LEGHIK 393
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGDFVAAC-VSPK-GE 454
+ S++ P N H+ + ++ + L Q + + + + + + V++ P G
Sbjct: 394 EIYSINFSP-NGFHVATGSGDNACKVWDLRQRRCIYTIPAHQ----NLVSSVKFQPNDGH 448
Query: 455 WIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
++ D ++H + HE V+GV P L+AT D T KLW
Sbjct: 449 YLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 38 (18.4 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 87 LRELDTARAILRQTQAMGVMKQEQPERYLR 116
++ LD ARA ++ +KQ++ + LR
Sbjct: 175 VKRLDAARAQKEIPESTRTIKQQELHKNLR 204
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 204 (76.9 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 58/173 (33%), Positives = 86/173 (49%)
Query: 220 RFSPDGQFL-VSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET-----VLCIEFSR 273
+F P G L V+ +++WD S +L L + D+T VL + +S
Sbjct: 109 QFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSP 168
Query: 274 DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARI 332
+ + LA GS DG I V+ + + L +LE H+ V SLVFS ++L S S D +
Sbjct: 169 NGKRLACGSMDGTICVFDVDRSKLLHQLE-GHNMPVRSLVFSPVDPRVLFSGSDDGHVNM 227
Query: 333 HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
H + LL GH+S+V + DG + T SSD TV++WDLK +QT
Sbjct: 228 HDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQT 280
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 50/175 (28%), Positives = 74/175 (42%)
Query: 209 KFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLC 268
K +K +SP+G+ L S DG I V+D KL L+ H+ V
Sbjct: 154 KTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEG--------HNMPVRS 205
Query: 269 IEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
+ FS D +L SGS DG + + G+ L H+ V S+ S DG I + S D
Sbjct: 206 LVFSPVDPRVLFSGSDDGHVNM-HDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSD 264
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS------RVVTASSDCTVKVWD 376
T R+ LK ++ H+ V F G R+ + S D +V ++D
Sbjct: 265 RTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYD 319
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 57/243 (23%), Positives = 95/243 (39%)
Query: 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336
+L +GS D +K+WR L R HS GV +L G S+S DS R+ +
Sbjct: 32 LLLTGSLDETVKLWRPDELD-LVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVD 90
Query: 337 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKSTDCLQTFKPPPP--LR 393
+ + S V F G+ + A S +VK+WD S + T P P +
Sbjct: 91 TNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPK 150
Query: 394 GGDAS-----VNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKREGGDFVAA 447
D + V SV P N + + +I + + + +++ V +
Sbjct: 151 PSDKTSSKKFVLSVAWSP-NGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFS 209
Query: 448 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 507
V P+ ++ +D ++ + L M H V+ V P +AT D T+
Sbjct: 210 PVDPRV--LFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTV 267
Query: 508 KLW 510
+LW
Sbjct: 268 RLW 270
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 182 (69.1 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF +KS A+ F P +++ F I++WDY G L F H+ V
Sbjct: 6 KFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLL--------HRFEDHEGPVR 57
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
++F + S D IKVW + + +CL L H + V ++ F R+ I+S S D
Sbjct: 58 GLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLT-GHLDYVRTVFFHRELPWIISASDD 116
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T RI ++ K + GH+ +V A F +V+AS D T+++WD+
Sbjct: 117 QTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDI 166
Score = 94 (38.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/88 (29%), Positives = 36/88 (40%)
Query: 298 LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
L + E + S + F +L F ST ++ + G LL F H V F
Sbjct: 4 LTKFE-SKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 358 NDGSRVVTASSDCTVKVWDLKSTDCLQT 385
V+A D T+KVW L + CL T
Sbjct: 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYT 90
Score = 84 (34.6 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
VVK G G ++ A P I +DR + + + K + + H +V
Sbjct: 200 VVKFILEGHTRGVNW--ASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVD 257
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
V HPH+NL+ + GED T+++W
Sbjct: 258 SVIFHPHQNLIISVGEDKTLRVW 280
Score = 50 (22.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
++ +++ H + V + HP L+ + +D +KLW+
Sbjct: 201 VKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWR 237
Score = 40 (19.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 397 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREG 441
+++N + N D ++ ++YI +QG++V + REG
Sbjct: 548 STLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLN---REG 589
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 211 (79.3 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 62/238 (26%), Positives = 112/238 (47%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+VS S D + VWD +G Q M H V C+++ D + SG+ D +
Sbjct: 354 VVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 403
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + GH
Sbjct: 404 KVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 460
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
S + + D +V+ ++D TVK+WD+K+ CLQT L+G + ++V
Sbjct: 461 QS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPNKHQSAVTCLQF 512
Query: 408 NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 464
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 513 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 570
Score = 184 (69.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 262 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 259 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 313
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 314 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 371
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 434
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 372 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 426 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 471
Query: 495 RNLLATYGEDCTMKLW 510
N+L + D T+K+W
Sbjct: 472 -NILVSGNADSTVKIW 486
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 54/178 (30%), Positives = 88/178 (49%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G H C +F G +VS S D ++VW ++GK + T + H V
Sbjct: 258 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR--------TLVGHTGGVWSS 307
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ RD+ ++ SGS D +KVW +G+C+ L H+ V + +++S S D+T
Sbjct: 308 QM-RDN-IIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLHE--KRVVSGSRDAT 362
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++ CL T +
Sbjct: 363 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 418
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+ G + C ++ DG+ +VS ++D ++VWD + + L T H V
Sbjct: 376 VLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLH-----TLQGHTNRVY 425
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
++F D + SGS D I+VW + +G C+ L H + +TS + +D ++S + D
Sbjct: 426 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GH-QSLTSGMELKDNI-LVSGNAD 480
Query: 328 STARIHGLKSGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
ST +I +K+G+ L+ +G H S V F + V+T+S D TVK+WDLK+ + ++
Sbjct: 481 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFIR 538
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D T HT++ G + +F DG +VS S D I VWD +G
Sbjct: 405 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--------C 453
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLV 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 454 IHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ 511
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLK 342
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 512 FNKNF--VITSSDDGTVKLWDLKTGEFIR 538
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 353 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 410
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 411 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 458
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 497
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 459 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 516
Query: 498 LATYGEDCTMKLW 510
+ T +D T+KLW
Sbjct: 517 VITSSDDGTVKLW 529
>RGD|1311114 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005102 "receptor binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030054 "cell
junction" evidence=ISO] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1311114 GO:GO:0005739 GO:GO:0005886 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:BC083714 IPI:IPI00364585 RefSeq:NP_001011969.1
UniGene:Rn.228807 ProteinModelPortal:Q5XIG8 IntAct:Q5XIG8
STRING:Q5XIG8 PRIDE:Q5XIG8 Ensembl:ENSRNOT00000009923 GeneID:297699
KEGG:rno:297699 UCSC:RGD:1311114 InParanoid:Q5XIG8 NextBio:642559
Genevestigator:Q5XIG8 Uniprot:Q5XIG8
Length = 350
Score = 205 (77.2 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 74/292 (25%), Positives = 134/292 (45%)
Query: 228 LVSCSFDGFIEVWDYLSGKLK--KDLQYQADE-----TFMMHDETVLCIEFSRDSEMLAS 280
+V +F G +L K K + Q D TF+ H V ++D+ A+
Sbjct: 17 VVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAAT 76
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
+ D KVW SG L L AH V ++ F++D + +L+ D RI+ L +
Sbjct: 77 AAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEA 134
Query: 341 L-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
KE GH+S + A++ ++ ++++A D TV++WD + +++ + SV
Sbjct: 135 EPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLN-------FNMSV 186
Query: 400 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459
+S+ P+ + +V+ S + + + +KSF + +A + P+ E++
Sbjct: 187 SSMEYIPEG-EILVITYGRSIAFHSAVSLEPIKSFEAP----ATINSASLHPEKEFLVAG 241
Query: 460 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
GED LY + + SG+ K H + V P L A+ ED T++LW+
Sbjct: 242 GEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 293
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 211 (79.3 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 47/132 (35%), Positives = 73/132 (55%)
Query: 255 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLV 313
A F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+
Sbjct: 330 AMSVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIE 389
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373
F GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K
Sbjct: 390 FDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLK 449
Query: 374 VWDLKSTDCLQT 385
+WDL+S C++T
Sbjct: 450 LWDLRSKVCIKT 461
Score = 205 (77.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 71/295 (24%), Positives = 136/295 (46%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
+FSP + L + D +++W+ K +++ + + + IEF L
Sbjct: 345 QFSPGSRLLATGGMDRRVKLWEVFGDKC----EFKG--SLSGSNAGITSIEFDSAGSYLL 398
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
+ S D ++W + + LR HS V S F D ++I+S S D T ++ L+S
Sbjct: 399 AASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 457
Query: 340 LLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
+K F G S ND + T V++ D ++ WD++S ++ + L G
Sbjct: 458 CIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRSESIVREME----LLG---K 506
Query: 399 VNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSS-GKREGGDFVAACVSPKGEWI 456
+ ++ L P+ + ++ C++ + I+ L+ V+ +FS+ G + G D+ A SP G ++
Sbjct: 507 ITALDLNPERTE-LLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYV 565
Query: 457 YCVGEDRNLYCFSHQSGKLEHLM-KVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ +LY ++ SGK+E ++ K H + V P + + T + LW
Sbjct: 566 AAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSPAGSHVVTVDKGSKAVLW 620
Score = 146 (56.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 61/251 (24%), Positives = 103/251 (41%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G+ + F G +L++ S D +W D Y+ T H VL +
Sbjct: 380 GSNAGITSIEFDSAGSYLLAASNDFASRIWTV-------D-DYRLRHTLTGHSGKVLSAK 431
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 432 FLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKKI 487
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
R ++S +++E A+ N + + +++ S D +K+ DL+ QTF P
Sbjct: 488 RFWDIRSESIVREMELLGKIT--ALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAP 545
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAAC 448
G D + +V F + ++ S+YI L G+V K S K A
Sbjct: 546 GFKCGSDWT-RAV--FSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLS--KHHSSSINAVA 600
Query: 449 VSPKGEWIYCV 459
SP G + V
Sbjct: 601 WSPAGSHVVTV 611
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 211 (79.3 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 62/238 (26%), Positives = 112/238 (47%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+VS S D + VWD +G Q M H V C+++ D + SG+ D +
Sbjct: 394 VVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 443
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + GH
Sbjct: 444 KVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 500
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
S + + D +V+ ++D TVK+WD+K+ CLQT L+G + ++V
Sbjct: 501 QS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPNKHQSAVTCLQF 552
Query: 408 NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 464
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 553 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 610
Score = 184 (69.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 262 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 299 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 353
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 411
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 434
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 412 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 466 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 511
Query: 495 RNLLATYGEDCTMKLW 510
N+L + D T+K+W
Sbjct: 512 -NILVSGNADSTVKIW 526
Score = 180 (68.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 54/178 (30%), Positives = 88/178 (49%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G H C +F G +VS S D ++VW ++GK + T + H V
Sbjct: 298 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR--------TLVGHTGGVWSS 347
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ RD+ ++ SGS D +KVW +G+C+ L H+ V + +++S S D+T
Sbjct: 348 QM-RDN-IIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLHE--KRVVSGSRDAT 402
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++ CL T +
Sbjct: 403 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 458
Score = 178 (67.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+ G + C ++ DG+ +VS ++D ++VWD + + L T H V
Sbjct: 416 VLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLH-----TLQGHTNRVY 465
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
++F D + SGS D I+VW + +G C+ L H + +TS + +D ++S + D
Sbjct: 466 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GH-QSLTSGMELKDNI-LVSGNAD 520
Query: 328 STARIHGLKSGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
ST +I +K+G+ L+ +G H S V F + V+T+S D TVK+WDLK+ + ++
Sbjct: 521 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFIR 578
Score = 148 (57.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D T HT++ G + +F DG +VS S D I VWD +G
Sbjct: 445 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--------C 493
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLV 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 494 IHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ 551
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLK 342
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 552 FNKNF--VITSSDDGTVKLWDLKTGEFIR 578
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 393 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 450
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 451 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 498
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 497
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 499 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 556
Query: 498 LATYGEDCTMKLW 510
+ T +D T+KLW
Sbjct: 557 VITSSDDGTVKLW 569
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 208 (78.3 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 52/169 (30%), Positives = 79/169 (46%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH-DETVLCI 269
G + ++ P G L SCS D +++W DLQ + E + + T
Sbjct: 361 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPAT 420
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
S MLAS S D +++W + G CL L + H E V S+ FS DG + S SFD
Sbjct: 421 SNPNSSIMLASASFDSTVRLWDVERGVCLHTLTK-HQEPVYSVAFSPDGKYLASGSFDKC 479
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
I +SG L+ +RG + + + G +V ++SD +V V DL+
Sbjct: 480 VHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDLR 527
Score = 153 (58.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 357 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQ-AHSKEIYTIKWSP 415
Query: 317 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
G S I+ S SFDST R+ ++ G L H V F+ DG + + S
Sbjct: 416 TGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGS 475
Query: 368 SDCTVKVWDLKSTDCLQTFK 387
D V +W+ +S + +++
Sbjct: 476 FDKCVHIWNTQSGSLVHSYR 495
Score = 145 (56.1 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 68/342 (19%), Positives = 130/342 (38%)
Query: 155 VPPSRLMALIGQALK-----WQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIK 209
+PPS+ L G + W LL G+ R + L H I+
Sbjct: 171 IPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 230
Query: 210 FG---TKSHAECAR--FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264
G S+ + ++ DG L + S+DGF +W G L T H
Sbjct: 231 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLAS--------TLGQHKG 281
Query: 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 324
+ +++++ + S D +W +G+ ++ HS + + ++ + S
Sbjct: 282 PIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNTTFASC 339
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
S D + L + +K F+GH++ VN + G + + S D T+K+W +K C+
Sbjct: 340 STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVH 399
Query: 385 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK----- 438
L+ + ++ P P N SSI + + V+ + +
Sbjct: 400 D------LQAHSKEIYTIKWSPTGP---ATSNPNSSIMLASASFDSTVRLWDVERGVCLH 450
Query: 439 ---REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
+ + SP G+++ D+ ++ ++ QSG L H
Sbjct: 451 TLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVH 492
Score = 134 (52.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 66/317 (20%), Positives = 123/317 (38%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM--HD- 263
T+ G +S ++P L S S D +W+ Q HD
Sbjct: 177 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 236
Query: 264 ---ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
+ V ++++ D +LA+GS DG ++W G L + H + +L +++ G+
Sbjct: 237 PSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQ-HKGPIFALKWNKKGNY 294
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
ILS D T I +G+ ++F HS+ D + N+ + + S+D + V L
Sbjct: 295 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCD 353
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKR 439
++TF+ G VN++ P + C+ ++ I ++ Q V + +
Sbjct: 354 RPVKTFQ------GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDTCVHDLQAHSK 406
Query: 440 E-----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP 493
E A +P + D + + + G H + H++ V V P
Sbjct: 407 EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSP 466
Query: 494 HRNLLATYGEDCTMKLW 510
LA+ D + +W
Sbjct: 467 DGKYLASGSFDKCVHIW 483
Score = 45 (20.9 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 9/33 (27%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPP+ L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPAALISILQKGLQYVEAEISINEDGTVFD 74
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 210 (79.0 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 82/324 (25%), Positives = 131/324 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
E Y P H TK + F G L+SCS D I++W+ + +
Sbjct: 273 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDR-------RC 325
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
TF+ H + V I F+ S + D IK+W +GQC+ R
Sbjct: 326 LRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNPD 385
Query: 316 RDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++V
Sbjct: 386 EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV 445
Query: 375 WDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
W+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 446 WEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF-- 495
Query: 433 SFSSGKREGGDFVA--AC---VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 487
+ K G VA AC SP ++ D L + ++ KL +K H+K I
Sbjct: 496 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCI 555
Query: 488 GVTHHPHR-NLLATYGEDCTMKLW 510
G HPH + + T G D +KLW
Sbjct: 556 GAVWHPHETSKVITCGWDGLIKLW 579
>ZFIN|ZDB-GENE-040426-1110 [details] [associations]
symbol:strap "serine/threonine kinase receptor
associated protein" species:7955 "Danio rerio" [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1110 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016301 HSSP:P16649
GeneTree:ENSGT00630000089849 EMBL:BX649476 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG
OrthoDB:EOG4CRM0M EMBL:BC049525 EMBL:BC065428 IPI:IPI00506790
RefSeq:NP_956598.1 UniGene:Dr.12320 STRING:Q7ZW92 DNASU:393274
Ensembl:ENSDART00000013224 Ensembl:ENSDART00000124627 GeneID:393274
KEGG:dre:393274 InParanoid:Q7ZW92 NextBio:20814331 Uniprot:Q7ZW92
Length = 329
Score = 203 (76.5 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 69/292 (23%), Positives = 130/292 (44%)
Query: 228 LVSCSFDGFIEVWDYLSGKLK--KDLQYQADE-----TFMMHDETVLCIEFSRDSEMLAS 280
+V +F G +L K K + Q D TF+ H V + ++ A+
Sbjct: 17 VVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNTEATKAAT 76
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
+ D KVW +G + L AH V S+ F++D + +L+ D RI+ L +
Sbjct: 77 AAADFTAKVWDAVTGDEVLTL--AHKHIVKSVNFTQDSNYLLTGGNDKVLRIYDLSKPEA 134
Query: 341 L-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
+E GH+S + A++ N+ ++++A+ D T+++WD + + ++T DASV
Sbjct: 135 EPQEIAGHTSAIKKALWCNNDQQILSAADDKTIRLWDKNTNEAVKTLS-------FDASV 187
Query: 400 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459
+S+ P ++ +T + Y ++K+ + +A + P ++
Sbjct: 188 SSMEYIPDGETLVITYGRTIAFY-NAHSLDLIKTVDAP----ASIHSASLHPDKDFFVAG 242
Query: 460 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
G+D LY + + + + K H V V P L A+ ED T++LW+
Sbjct: 243 GDDFKLYKYDYTTKEEMESYKGHFGPVHCVRFSPDGELYASGSEDGTLRLWQ 294
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 210 (79.0 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 46/128 (35%), Positives = 72/128 (56%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 317
F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+ F
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSA 377
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 378 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 378 KSTDCLQT 385
+S C++T
Sbjct: 438 RSKVCIKT 445
Score = 177 (67.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 66/272 (24%), Positives = 121/272 (44%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
+FSP + L + D +++W+ K +++ + + + IEF L
Sbjct: 329 QFSPGSRLLATGGMDRRVKLWEVFGDKC----EFKG--SLSGSNAGITSIEFDSAGSYLL 382
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
+ S D ++W + + LR HS V S F D ++I+S S D T ++ L+S
Sbjct: 383 AASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 441
Query: 340 LLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK-STDCLQTFKPPPPLRGGDA 397
+K F G S ND + T V++ D ++ WD++ +T L + L G
Sbjct: 442 CIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRYNTRSLVSLGQ---LLGKQT 494
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-SFSS-GKREGGDFVAACVSPKGEW 455
+ F ++ C++ + I+ L+ V+ +FS+ G + G D+ SP G +
Sbjct: 495 ASR----FNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGSY 550
Query: 456 IYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 487
+ + +LY +S SGK+E ++ H I
Sbjct: 551 VAAGSAEGSLYVWSVLSGKVEKVLSKHHSSPI 582
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 57/245 (23%), Positives = 100/245 (40%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G+ + F G +L++ S D +W D Y+ T H VL +
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTV-------D-DYRLRHTLTGHSGKVLSAK 415
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 416 FLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKKI 471
Query: 331 RIHGLK-SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
R ++ + + L + F + + +++ S D +K+ DL+ QTF P
Sbjct: 472 RFWDIRYNTRSLVSLGQLLGKQTASRFNPERTELLSCSRDDLLKIIDLRINAVRQTFSAP 531
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAAC 448
G D + V +F + ++ + S+Y+ + L G+V K S K A
Sbjct: 532 GFKCGSDWT--RV-VFSPDGSYVAAGSAEGSLYVWSVLSGKVEKVLS--KHHSSPINAVA 586
Query: 449 VSPKG 453
SP G
Sbjct: 587 WSPSG 591
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 210 (79.0 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 46/128 (35%), Positives = 72/128 (56%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 317
F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+ F
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSA 377
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 378 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 378 KSTDCLQT 385
+S C++T
Sbjct: 438 RSKVCIKT 445
Score = 156 (60.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 62/251 (24%), Positives = 107/251 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G+ + F G +L++ S D +W D Y+ T H VL +
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTV-------D-DYRLRHTLTGHSGKVLSAK 415
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F D+ + SGS D +K+W +RS C++ + S +V + ++S FD
Sbjct: 416 FLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS--CNDIVCTEQC--VMSGHFDKKI 471
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
R ++S +++E A+ N + + +++ S D +K+ DL+ QTF P
Sbjct: 472 RFWDIRSESIVREMELLGKIT--ALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAP 529
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAAC 448
G D + V +F + ++ + S+YI + L G+V K S K+ G A
Sbjct: 530 GFKCGSDWT--RV-VFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLS--KQHGSSINAVA 584
Query: 449 VSPKGEWIYCV 459
SP G + V
Sbjct: 585 WSPSGSHVVSV 595
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 45/180 (25%), Positives = 78/180 (43%)
Query: 201 PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
PTT + I +FSP + L + D +++W+ K +++ +
Sbjct: 311 PTT-AMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKC----EFKG--SLS 363
Query: 261 MHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
+ + IEF L + S D ++W + + LR HS V S F D ++
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYR-LRHTLTGHSGKVLSAKFLLDNAR 422
Query: 321 ILSTSFDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
I+S S D T ++ L+S +K F G S ND + T V++ D ++ WD++S
Sbjct: 423 IVSGSHDRTLKLWDLRSKVCIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRS 478
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 211 (79.3 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 62/238 (26%), Positives = 112/238 (47%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+VS S D + VWD +G Q M H V C+++ D + SG+ D +
Sbjct: 474 VVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 523
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + GH
Sbjct: 524 KVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 580
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
S + + D +V+ ++D TVK+WD+K+ CLQT L+G + ++V
Sbjct: 581 QS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPNKHQSAVTCLQF 632
Query: 408 NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 464
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 633 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 690
Score = 184 (69.8 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 262 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 379 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 433
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 491
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 434
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 492 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 546 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 591
Query: 495 RNLLATYGEDCTMKLW 510
N+L + D T+K+W
Sbjct: 592 -NILVSGNADSTVKIW 606
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/178 (30%), Positives = 88/178 (49%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G H C +F G +VS S D ++VW ++GK + T + H V
Sbjct: 378 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR--------TLVGHTGGVWSS 427
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ RD+ ++ SGS D +KVW +G+C+ L H+ V + +++S S D+T
Sbjct: 428 QM-RDN-IIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLHE--KRVVSGSRDAT 482
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++ CL T +
Sbjct: 483 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 538
Score = 178 (67.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+ G + C ++ DG+ +VS ++D ++VWD + + L T H V
Sbjct: 496 VLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLH-----TLQGHTNRVY 545
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
++F D + SGS D I+VW + +G C+ L H + +TS + +D ++S + D
Sbjct: 546 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GH-QSLTSGMELKDNI-LVSGNAD 600
Query: 328 STARIHGLKSGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
ST +I +K+G+ L+ +G H S V F + V+T+S D TVK+WDLK+ + ++
Sbjct: 601 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFIR 658
Score = 148 (57.2 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D T HT++ G + +F DG +VS S D I VWD +G
Sbjct: 525 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--------C 573
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLV 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 574 IHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ 631
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLK 342
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 632 FNKNF--VITSSDDGTVKLWDLKTGEFIR 658
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 473 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 530
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 531 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 578
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 497
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 579 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 636
Query: 498 LATYGEDCTMKLW 510
+ T +D T+KLW
Sbjct: 637 VITSSDDGTVKLW 649
>UNIPROTKB|Q5E959 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9913 "Bos taurus" [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849
EMBL:BT021061 EMBL:BC119959 IPI:IPI00698102 RefSeq:NP_001015567.1
UniGene:Bt.17089 ProteinModelPortal:Q5E959 STRING:Q5E959
PRIDE:Q5E959 Ensembl:ENSBTAT00000018840 GeneID:510201
KEGG:bta:510201 CTD:11171 HOGENOM:HOG000174258 HOVERGEN:HBG055228
InParanoid:Q5E959 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
NextBio:20869325 Uniprot:Q5E959
Length = 350
Score = 204 (76.9 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 74/292 (25%), Positives = 133/292 (45%)
Query: 228 LVSCSFDGFIEVWDYLSGKLK--KDLQYQADE-----TFMMHDETVLCIEFSRDSEMLAS 280
+V +F G +L K K + Q D TF+ H V ++D+ A+
Sbjct: 17 VVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAAT 76
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
+ D KVW SG L L AH V ++ F++D + +L+ D RI+ L +
Sbjct: 77 AAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEA 134
Query: 341 L-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
KE GH+S + A++ ++ ++++A D TV++WD + +++ + SV
Sbjct: 135 EPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLN-------FNMSV 186
Query: 400 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459
+S+ P+ + +V+ S + + +KSF + +A + P+ E++
Sbjct: 187 SSMEYIPEG-EILVITYGRSIAFHSAVSLDPIKSFEAP----ATINSASLHPEKEFVVAG 241
Query: 460 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
GED LY + + SG+ K H + V P L A+ ED T++LW+
Sbjct: 242 GEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 293
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 211 (79.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 62/238 (26%), Positives = 112/238 (47%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+VS S D + VWD +G Q M H V C+++ D + SG+ D +
Sbjct: 479 VVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 528
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + GH
Sbjct: 529 KVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 585
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
S + + D +V+ ++D TVK+WD+K+ CLQT L+G + ++V
Sbjct: 586 QS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPNKHQSAVTCLQF 637
Query: 408 NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 464
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 638 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 695
Score = 184 (69.8 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 262 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 384 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 438
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 439 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 496
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 434
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 497 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 551 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 596
Query: 495 RNLLATYGEDCTMKLW 510
N+L + D T+K+W
Sbjct: 597 -NILVSGNADSTVKIW 611
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/178 (30%), Positives = 88/178 (49%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G H C +F G +VS S D ++VW ++GK + T + H V
Sbjct: 383 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR--------TLVGHTGGVWSS 432
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ RD+ ++ SGS D +KVW +G+C+ L H+ V + +++S S D+T
Sbjct: 433 QM-RDN-IIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLHE--KRVVSGSRDAT 487
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++ CL T +
Sbjct: 488 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 543
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+ G + C ++ DG+ +VS ++D ++VWD + + L T H V
Sbjct: 501 VLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLH-----TLQGHTNRVY 550
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
++F D + SGS D I+VW + +G C+ L H + +TS + +D ++S + D
Sbjct: 551 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GH-QSLTSGMELKDNI-LVSGNAD 605
Query: 328 STARIHGLKSGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
ST +I +K+G+ L+ +G H S V F + V+T+S D TVK+WDLK+ + ++
Sbjct: 606 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFIR 663
Score = 148 (57.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D T HT++ G + +F DG +VS S D I VWD +G
Sbjct: 530 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--------C 578
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLV 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 579 IHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ 636
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLK 342
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 637 FNKNF--VITSSDDGTVKLWDLKTGEFIR 663
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 478 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 535
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 536 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 583
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 497
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 584 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 641
Query: 498 LATYGEDCTMKLW 510
+ T +D T+KLW
Sbjct: 642 VITSSDDGTVKLW 654
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 212 (79.7 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 59/217 (27%), Positives = 96/217 (44%)
Query: 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
+G S + F + + + G I++WD K+ + T H + +
Sbjct: 56 YGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVR--------TLTGHRSNCISV 107
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+F E ASGS D +K+W IR C+ + H+ GV L F+ DG ++S D+
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVNVLRFTPDGRWVVSGGEDNI 166
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
++ L +GKLL EF+ H + F + T S+D TVK WDL++ + + +
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS---- 222
Query: 390 PPLRGGDASVNSVHLFPKNPD-HIVVCNKTSSIYIMT 425
GG + V NPD V+C S+ I +
Sbjct: 223 ----GGPETAG-VRCLSFNPDGKTVLCGLQESLKIFS 254
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/198 (25%), Positives = 91/198 (45%)
Query: 253 YQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 311
Y+ E F+ H V C++ R S +L +G +D K+ +W I + L HS G+ S
Sbjct: 7 YKLQE-FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGIDS 64
Query: 312 LVFSRDGSQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369
+ F D S++L + + T ++ L+ K+++ GH S F G + S D
Sbjct: 65 VTF--DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 370 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-G 428
+K+WD++ C+ T+K G VN + P +V + + + + L G
Sbjct: 123 TNLKIWDIRKKGCIHTYK------GHTRGVNVLRFTPDGR-WVVSGGEDNIVKVWDLTAG 175
Query: 429 QVVKSFSS--GKREGGDF 444
+++ F S G+ + DF
Sbjct: 176 KLLTEFKSHEGQIQSLDF 193
Score = 169 (64.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 56/210 (26%), Positives = 90/210 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AHS V L R S++L T D + + + GHSS ++ F D S
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF--DASE 71
Query: 363 VVTASSDC--TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 420
V+ A+ T+K+WDL+ ++T L G ++ SV P + + ++
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRT------LTGHRSNCISVDFHPFG-EFFASGSLDTN 124
Query: 421 IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480
+ I ++ + G G + + +P G W+ GED + + +GKL K
Sbjct: 125 LKIWDIRKKGCIHTYKGHTRGVNVLR--FTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
HE + + HPH LLAT D T+K W
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 170 (64.9 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
+SP G FL S SFD +WD SG +++ + T H+ V +++S +LA+
Sbjct: 58 WSPCGTFLASASFDATTCIWDQKSG------EFECNATLEGHENEVKSVDWSVSGSLLAT 111
Query: 281 GSQDGKIKVWRIRSG---QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
+D + +W ++ +C + +H++ V +V+ + S S+D T +++
Sbjct: 112 CGRDKSVWIWEVQEDDEYECASVIH-SHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDE 170
Query: 338 G--KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
GH S V F G R+V+ S D TV++W
Sbjct: 171 DDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIW 210
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 63/271 (23%), Positives = 111/271 (40%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ--CLRRLERAHSEGVTSLVFSRDGS 319
H++ V + +S + +LAS D I++W + C LE H + SL +S G+
Sbjct: 4 HEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCGT 63
Query: 320 QILSTSFDSTARIHGLKSGKLL--KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ S SFD+T I KSG+ GH + V ++ GS + T D +V +W++
Sbjct: 64 FLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEV 123
Query: 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-----------TL 426
+ D ++ + V V P + + C+ +I + TL
Sbjct: 124 QEDD---EYECASVIHSHTQDVKKVVWHPTK-EILASCSYDDTIKLYKEDEDDWSCCDTL 179
Query: 427 QGQVVKSFSSGKREGGDFVAACVSPKGE--W-IYCVGEDRNLYCFS-HQSGKLEHLMK-V 481
+G +S GD + +C K W Y G + H K ++
Sbjct: 180 EGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGY 239
Query: 482 HEKDVIGVTHHPHRNLLATY-GEDCTMKLWK 511
H++ + V L+AT G+DC ++++K
Sbjct: 240 HDRTIYDVHWSKVSGLIATASGDDC-IRIFK 269
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/232 (24%), Positives = 98/232 (42%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G ++ + +S G L +C D + +W+ +++D +Y+ H + V +
Sbjct: 92 GHENEVKSVDWSVSGSLLATCGRDKSVWIWE-----VQEDDEYECASVIHSHTQDVKKVV 146
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQ--CLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
+ E+LAS S D IK+++ C LE H V S+ F G +I+S S D
Sbjct: 147 WHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLE-GHESTVWSISFDGSGDRIVSCSDDK 205
Query: 329 TARI---------HGLK-SGKLLK-----EFRG-HSSYVNDAIFTNDGSRVVTASSDCTV 372
T RI G+ SGK K G H + D ++ + TAS D +
Sbjct: 206 TVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCI 265
Query: 373 KVW--DLKSTDCLQTFKPPPPLRGGDA-SVNSVHLFPKNPDHIVVCNKTSSI 421
+++ D S +F+ R + VNS+ PK+ + + C+ ++
Sbjct: 266 RIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTV 317
Score = 76 (31.8 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 480 KVHEKDVIGVTHHPH-RNLLATYGEDCTMKLWK 511
K H DV + HP N+LAT +D T+KLW+
Sbjct: 289 KAHSMDVNSICWHPKDENILATCSDDGTVKLWR 321
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 210 (79.0 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 62/238 (26%), Positives = 111/238 (46%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+VS S D + VWD +G Q M H V C+++ D + SG+ D +
Sbjct: 396 VVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 445
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + GH
Sbjct: 446 KVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 502
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
S + + D +V+ ++D TVK+WD+K+ CLQT L+G ++V
Sbjct: 503 QS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQT------LQGPSKHQSAVTCLQF 554
Query: 408 NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 464
N + ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 555 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 612
Score = 184 (69.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 262 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 301 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 355
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 413
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 434
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 414 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 468 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 513
Query: 495 RNLLATYGEDCTMKLW 510
N+L + D T+K+W
Sbjct: 514 -NILVSGNADSTVKIW 528
Score = 180 (68.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 54/178 (30%), Positives = 88/178 (49%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G H C +F G +VS S D ++VW ++GK + T + H V
Sbjct: 300 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR--------TLVGHTGGVWSS 349
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ RD+ ++ SGS D +KVW +G+C+ L H+ V + +++S S D+T
Sbjct: 350 QM-RDN-IIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLHE--KRVVSGSRDAT 404
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++ CL T +
Sbjct: 405 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 460
Score = 178 (67.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+ G + C ++ DG+ +VS ++D ++VWD + + L T H V
Sbjct: 418 VLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLH-----TLQGHTNRVY 467
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
++F D + SGS D I+VW + +G C+ L H + +TS + +D ++S + D
Sbjct: 468 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GH-QSLTSGMELKDNI-LVSGNAD 522
Query: 328 STARIHGLKSGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
ST +I +K+G+ L+ +G H S V F + V+T+S D TVK+WDLK+ + ++
Sbjct: 523 STVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFIR 580
Score = 147 (56.8 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D T HT++ G + +F DG +VS S D I VWD +G
Sbjct: 447 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--------C 495
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLV 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 496 IHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQ 553
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLK 342
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 554 FNKNF--VITSSDDGTVKLWDLKTGEFIR 580
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 452
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 453 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 500
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 497
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 501 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF 558
Query: 498 LATYGEDCTMKLW 510
+ T +D T+KLW
Sbjct: 559 VITSSDDGTVKLW 571
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 207 (77.9 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 82/324 (25%), Positives = 131/324 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
E Y P H TK + F G L+SCS D I++W+ + +
Sbjct: 137 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR-------RC 189
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 190 LRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPD 249
Query: 316 RDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++V
Sbjct: 250 EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV 309
Query: 375 WDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
W+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 310 WEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF-- 359
Query: 433 SFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDVI 487
+ K G VA AC V + Y + D N L + ++ KL K H+K I
Sbjct: 360 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCI 419
Query: 488 GVTHHPHR-NLLATYGEDCTMKLW 510
G HPH + + T G D +KLW
Sbjct: 420 GAVWHPHETSKVITCGWDGLIKLW 443
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 209 (78.6 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 76/297 (25%), Positives = 123/297 (41%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C+ FS DG+ L +CS G ++W+ ++ + D H E + FS +
Sbjct: 261 CS-FSRDGKILATCSLSGVTKLWEM--PQVTNTIAVLKD-----HKERATDVVFSPVDDC 312
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
LA+ S D K+W+ G L+ E H + + + F G + +TS+D T R+ + +
Sbjct: 313 LATASADRTAKLWKT-DGTLLQTFE-GHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINT 370
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP-PPLRGGD 396
G L GHS V F DG+ + D +VWDL++ + F+ P+ +
Sbjct: 371 GAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVN 430
Query: 397 ASVNSVHLFPKNPDH---IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453
S N HL D+ I S+YI+ +V +EG + A S
Sbjct: 431 FSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEG--YFLATAS--- 485
Query: 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
Y D + +S + L + HE V + + +AT D T+KLW
Sbjct: 486 ---Y----DMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 184 (69.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 47/162 (29%), Positives = 74/162 (45%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
F DG SC D VWD +G+ L +Q H + V + FS + LAS
Sbjct: 389 FQQDGALAASCGLDSLARVWDLRTGR--SILVFQG------HIKPVFSVNFSPNGYHLAS 440
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS-RDGSQILSTSFDSTARIHGLKSGK 339
G +D + ++W +R + L + AH+ V+ + + ++G + + S+D I +
Sbjct: 441 GGEDNQCRIWDLRMRKSLYIIP-AHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFS 499
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
L+K GH S V T D S + T S D T+K+W D
Sbjct: 500 LVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGND 541
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 213 KSHAECAR---FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
K H E A FSP L + S D ++W G L LQ TF H + + +
Sbjct: 295 KDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTL---LQ-----TFEGHLDRLARV 345
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
F + L + S D ++W I +G L L+ HS V + F +DG+ S DS
Sbjct: 346 AFHPSGKYLGTTSYDKTWRLWDINTGAELL-LQEGHSRSVYGIAFQQDGALAASCGLDSL 404
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
AR+ L++G+ + F+GH V F+ +G + + D ++WDL+
Sbjct: 405 ARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
Score = 148 (57.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 61/250 (24%), Positives = 100/250 (40%)
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
D + FSRD ++LA+ S G K+W + + + H E T +VFS +
Sbjct: 255 DRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLA 314
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382
+ S D TA++ G LL+ F GH + F G + T S D T ++WD+ +T
Sbjct: 315 TASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI-NTGA 372
Query: 383 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREG 441
+ G SV + F ++ C S + L+ G+ + F +
Sbjct: 373 ELLLQ-----EGHSRSVYGI-AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKP- 425
Query: 442 GDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN-LLAT 500
+ SP G + GED + + K +++ H V V + P LAT
Sbjct: 426 --VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLAT 483
Query: 501 YGEDCTMKLW 510
D + +W
Sbjct: 484 ASYDMKVNIW 493
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 207 (77.9 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 82/324 (25%), Positives = 131/324 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
E Y P H TK + F G L+SCS D I++W+ + +
Sbjct: 140 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR-------RC 192
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 193 LRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPD 252
Query: 316 RDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++V
Sbjct: 253 EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV 312
Query: 375 WDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
W+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 313 WEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF-- 362
Query: 433 SFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDVI 487
+ K G VA AC V + Y + D N L + ++ KL K H+K I
Sbjct: 363 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCI 422
Query: 488 GVTHHPHR-NLLATYGEDCTMKLW 510
G HPH + + T G D +KLW
Sbjct: 423 GAVWHPHETSKVITCGWDGLIKLW 446
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 203 (76.5 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
FG + ARF P G + S D I +W+ G +K Y + +
Sbjct: 47 FGHTAEVLVARFDPSGSYFASGGMDRQILLWNVF-GDVKN---YGVLNGCK---GAITDL 99
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDS 328
++SRDS ++ S D + W SGQ +R+ + H+ V +L + GS++L S S D
Sbjct: 100 QWSRDSRVVYCSSSDTHLMSWDAVSGQKIRK-HKGHAGVVNALDVLKVGSELLTSVSDDC 158
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAI-FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
T ++ +S +K Y A+ G++V D +K+WDL++ C K
Sbjct: 159 TMKVWDSRSKDCIKTIE--EKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLK 216
Query: 388 PPPPLRGGDA-SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 446
+ A S + L + D+ V Q Q+ + G+ + +
Sbjct: 217 GHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEH--NLLG 274
Query: 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 506
S ++ D+N+Y +S +G L +++ HE V V HPH++++ + D T
Sbjct: 275 VAWSRNSRFVGAGSSDKNVYVWS-ATGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSDRT 333
Query: 507 MKL 509
+ L
Sbjct: 334 IFL 336
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 202 (76.2 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+D + +WD G + F+ H + VL + FS D+ + SG
Sbjct: 78 SSDGQFALSGSWDKTLRLWDLNQGVSTRQ--------FISHTKDVLSVAFSADNRQIVSG 129
Query: 282 SQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W + QC + + H++ V+++ FS I+S +D ++ L +
Sbjct: 130 SRDKSIKLWNTLA-QCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNC 188
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
+L GH+ YVN + DGS + D +WDL L T L G D
Sbjct: 189 RLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LPGNDV- 241
Query: 399 VNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIY 457
+N++ +P+ +C SSI I L+ + K K E +A+ S +G
Sbjct: 242 INAMSF---SPNRYWLCAAVGSSIKIWDLEDK--KEIEELKPE----IASSGSSRGSSPQ 292
Query: 458 CV 459
C+
Sbjct: 293 CI 294
Score = 164 (62.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 67/249 (26%), Positives = 106/249 (42%)
Query: 274 DSEMLASGSQDGKIKVWRIRS---------GQCLRRLERAHSEGVTSLVFSRDGSQILST 324
D + S S+D I VW + S G+ +R L H+ V+ +V S DG LS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT-GHNHFVSDVVISSDGQFALSG 87
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
S+D T R+ L G ++F H+ V F+ D ++V+ S D ++K+W+ + C
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA-QCKY 146
Query: 385 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY-IMTLQGQVVKSFSSGKREGGD 443
T V++V P N D ++V + + L +K+ G G
Sbjct: 147 TITDDCHTDW----VSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHT--GY 200
Query: 444 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATY 501
VSP G G+D + GK HL + DVI ++ P+R L A
Sbjct: 201 VNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLPGNDVINAMSFSPNRYWLCAAV 258
Query: 502 GEDCTMKLW 510
G ++K+W
Sbjct: 259 GS--SIKIW 265
Score = 133 (51.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS---RDSEM 277
FS D + +VS S D I++W+ L+ + K + D+ H + V + FS RD +
Sbjct: 119 FSADNRQIVSGSRDKSIKLWNTLA-QCKYTI---TDDC---HTDWVSTVRFSPSNRDPVI 171
Query: 278 LASGSQDGKIKVWRIRSGQC-LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336
+++G D +KVW + G C L+ H+ V ++ S DGS S D A + L
Sbjct: 172 VSAG-WDKVVKVWNL--GNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLN 228
Query: 337 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
GK L G+ V +A+ + + A+ ++K+WDL+ ++ KP
Sbjct: 229 EGKHLYTLPGND--VINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKP 278
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 224 DGQFLVSCSFDGFIEVWDYLS-GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282
D ++S S D I VWD S + + + + H+ V + S D + SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGKLL 341
D +++W + G R+ +H++ V S+ FS D QI+S S D + ++ + L K
Sbjct: 89 WDKTLRLWDLNQGVSTRQFI-SHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYT 147
Query: 342 KEFRGHSSYVNDAIFT--NDGSRVVTASSDCTVKVWDL 377
H+ +V+ F+ N +V+A D VKVW+L
Sbjct: 148 ITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL 185
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 202 (76.2 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
S DGQF +S S+D + +WD G + F+ H + VL + FS D+ + SG
Sbjct: 78 SSDGQFALSGSWDKTLRLWDLNQGVSTRQ--------FISHTKDVLSVAFSADNRQIVSG 129
Query: 282 SQDGKIKVWRIRSGQCLRRL-ERAHSEGVTSLVFSRDGSQ--ILSTSFDSTARIHGLKSG 338
S+D IK+W + QC + + H++ V+++ FS I+S +D ++ L +
Sbjct: 130 SRDKSIKLWNTLA-QCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNC 188
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
+L GH+ YVN + DGS + D +WDL L T L G D
Sbjct: 189 RLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT------LPGNDV- 241
Query: 399 VNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIY 457
+N++ +P+ +C SSI I L+ + K K E +A+ S +G
Sbjct: 242 INAMSF---SPNRYWLCAAVGSSIKIWDLEDK--KEIEELKPE----IASSGSSRGSSPQ 292
Query: 458 CV 459
C+
Sbjct: 293 CI 294
Score = 164 (62.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 67/249 (26%), Positives = 106/249 (42%)
Query: 274 DSEMLASGSQDGKIKVWRIRS---------GQCLRRLERAHSEGVTSLVFSRDGSQILST 324
D + S S+D I VW + S G+ +R L H+ V+ +V S DG LS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT-GHNHFVSDVVISSDGQFALSG 87
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
S+D T R+ L G ++F H+ V F+ D ++V+ S D ++K+W+ + C
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA-QCKY 146
Query: 385 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY-IMTLQGQVVKSFSSGKREGGD 443
T V++V P N D ++V + + L +K+ G G
Sbjct: 147 TITDDCHTDW----VSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHT--GY 200
Query: 444 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRN-LLATY 501
VSP G G+D + GK HL + DVI ++ P+R L A
Sbjct: 201 VNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLPGNDVINAMSFSPNRYWLCAAV 258
Query: 502 GEDCTMKLW 510
G ++K+W
Sbjct: 259 GS--SIKIW 265
Score = 133 (51.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS---RDSEM 277
FS D + +VS S D I++W+ L+ + K + D+ H + V + FS RD +
Sbjct: 119 FSADNRQIVSGSRDKSIKLWNTLA-QCKYTI---TDDC---HTDWVSTVRFSPSNRDPVI 171
Query: 278 LASGSQDGKIKVWRIRSGQC-LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336
+++G D +KVW + G C L+ H+ V ++ S DGS S D A + L
Sbjct: 172 VSAG-WDKVVKVWNL--GNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLN 228
Query: 337 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
GK L G+ V +A+ + + A+ ++K+WDL+ ++ KP
Sbjct: 229 EGKHLYTLPGND--VINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKP 278
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 224 DGQFLVSCSFDGFIEVWDYLS-GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282
D ++S S D I VWD S + + + + H+ V + S D + SGS
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGKLL 341
D +++W + G R+ +H++ V S+ FS D QI+S S D + ++ + L K
Sbjct: 89 WDKTLRLWDLNQGVSTRQFI-SHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYT 147
Query: 342 KEFRGHSSYVNDAIFT--NDGSRVVTASSDCTVKVWDL 377
H+ +V+ F+ N +V+A D VKVW+L
Sbjct: 148 ITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNL 185
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 84/324 (25%), Positives = 136/324 (41%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
E Y P H TK + F G L+SCS D I++W+ + G+ ++ L+
Sbjct: 272 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWE-VYGE-RRCLR--- 326
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 327 --TFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPD 384
Query: 316 RDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++V
Sbjct: 385 EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV 444
Query: 375 WDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
W+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 445 WEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF-- 494
Query: 433 SFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDVI 487
+ K G VA AC V + Y + D N L + ++ KL K H+K I
Sbjct: 495 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCI 554
Query: 488 GVTHHPHR-NLLATYGEDCTMKLW 510
G HPH + + T G D +KLW
Sbjct: 555 GAVWHPHETSKVITCGWDGLIKLW 578
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 47/125 (37%), Positives = 69/125 (55%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 317
F HD V + FS S +LA+G D ++K+W + SG+C + S G+TS+ F
Sbjct: 313 FDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSA 372
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 373 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDL 432
Query: 378 KSTDC 382
+S C
Sbjct: 433 RSKVC 437
>UNIPROTKB|E2RBU1 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000122 GO:GO:0030512 GeneTree:ENSGT00630000089849 CTD:11171
KO:K13137 OMA:LWQTTVG EMBL:AAEX03015237 RefSeq:XP_543790.1
ProteinModelPortal:E2RBU1 Ensembl:ENSCAFT00000020131 GeneID:486663
KEGG:cfa:486663 Uniprot:E2RBU1
Length = 350
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 74/292 (25%), Positives = 133/292 (45%)
Query: 228 LVSCSFDGFIEVWDYLSGKLK--KDLQYQADE-----TFMMHDETVLCIEFSRDSEMLAS 280
+V +F G +L K K + Q D TF+ H V ++D+ A+
Sbjct: 17 VVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAAT 76
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
+ D KVW SG L L AH V ++ F++D + +L+ D RI+ L +
Sbjct: 77 AAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEA 134
Query: 341 L-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
KE GH+S + A++ ++ ++++A D TV++WD + +++ + SV
Sbjct: 135 EPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLN-------FNMSV 186
Query: 400 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459
+S+ P+ + +V+ S + + +KSF + +A + P+ E++
Sbjct: 187 SSMEYIPEG-EILVITYGRSIAFHSAVSLDPIKSFEAP----ATINSASLHPEKEFLVAG 241
Query: 460 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
GED LY + + SG+ K H + V P L A+ ED T++LW+
Sbjct: 242 GEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 293
>UNIPROTKB|Q9Y3F4 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005634 Reactome:REACT_111102
Pathway_Interaction_DB:tgfbrpathway GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0007179 EMBL:CH471094 GO:GO:0030512 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:AJ010025 EMBL:AB024327 EMBL:AF161496 EMBL:AY049776
EMBL:AL136691 EMBL:BT020044 EMBL:BT020045 EMBL:AK312295
EMBL:BC000162 EMBL:BC062306 IPI:IPI00941907 RefSeq:NP_009109.3
UniGene:Hs.504895 ProteinModelPortal:Q9Y3F4 SMR:Q9Y3F4
IntAct:Q9Y3F4 MINT:MINT-1346033 STRING:Q9Y3F4 PhosphoSite:Q9Y3F4
DMDM:12643951 OGP:Q9Y3F4 PaxDb:Q9Y3F4 PeptideAtlas:Q9Y3F4
PRIDE:Q9Y3F4 DNASU:11171 Ensembl:ENST00000419869 GeneID:11171
KEGG:hsa:11171 UCSC:uc001rdc.4 GeneCards:GC12P016035
HGNC:HGNC:30796 HPA:HPA027320 MIM:605986 neXtProt:NX_Q9Y3F4
PharmGKB:PA134867032 InParanoid:Q9Y3F4 PhylomeDB:Q9Y3F4
ChiTaRS:STRAP GenomeRNAi:11171 NextBio:42509 ArrayExpress:Q9Y3F4
Bgee:Q9Y3F4 CleanEx:HS_STRAP Genevestigator:Q9Y3F4
GermOnline:ENSG00000023734 Uniprot:Q9Y3F4
Length = 350
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 74/292 (25%), Positives = 133/292 (45%)
Query: 228 LVSCSFDGFIEVWDYLSGKLK--KDLQYQADE-----TFMMHDETVLCIEFSRDSEMLAS 280
+V +F G +L K K + Q D TF+ H V ++D+ A+
Sbjct: 17 VVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAAT 76
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
+ D KVW SG L L AH V ++ F++D + +L+ D RI+ L +
Sbjct: 77 AAADFTAKVWDAVSGDELMTL--AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEA 134
Query: 341 L-KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399
KE GH+S + A++ ++ ++++A D TV++WD + +++ + SV
Sbjct: 135 EPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLN-------FNMSV 186
Query: 400 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459
+S+ P+ + +V+ S + + +KSF + +A + P+ E++
Sbjct: 187 SSMEYIPEG-EILVITYGRSIAFHSAVSLDPIKSFEAP----ATINSASLHPEKEFLVAG 241
Query: 460 GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
GED LY + + SG+ K H + V P L A+ ED T++LW+
Sbjct: 242 GEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 293
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/217 (28%), Positives = 93/217 (42%)
Query: 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
+G S + F + + + G I++WD K+ + T H + +
Sbjct: 56 YGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVR--------TLTGHRSNCVSV 107
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
F E ASGS D +K+W IR C+ + H+ GV L F+ DG I+S D+
Sbjct: 108 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVNVLRFTPDGRWIVSGGEDNV 166
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
++ L +GKLL EF+ H + F + T S+D TVK WDL +TF+
Sbjct: 167 VKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL------ETFEL- 219
Query: 390 PPLRGGDASVNSVHLFPKNPD-HIVVCNKTSSIYIMT 425
+ G V NPD V+C S+ I +
Sbjct: 220 --IGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFS 254
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 55/208 (26%), Positives = 89/208 (42%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362
AHS V L R S++L T D + + + GHSS ++ F
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 73
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
V ++ T+K+WDL+ ++T L G ++ SV+ P + + +++
Sbjct: 74 VAAGAASGTIKLWDLEEAKVVRT------LTGHRSNCVSVNFHPFG-EFFASGSLDTNLK 126
Query: 423 IMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH 482
I ++ + G G + + +P G WI GED + + +GKL H K H
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLR--FTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 184
Query: 483 EKDVIGVTHHPHRNLLATYGEDCTMKLW 510
E + + HPH LLAT D T+K W
Sbjct: 185 EGKIQSLDFHPHEFLLATGSADKTVKFW 212
Score = 176 (67.0 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 50/196 (25%), Positives = 87/196 (44%)
Query: 253 YQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 311
Y+ E F+ H V C++ R S +L +G +D K+ +W I + L HS G+ S
Sbjct: 7 YKLQE-FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGIDS 64
Query: 312 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371
+ F + + + T ++ L+ K+++ GH S F G + S D
Sbjct: 65 VTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTN 124
Query: 372 VKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQV 430
+K+WD++ C+ T+K G VN + P IV + + + + L G++
Sbjct: 125 LKIWDIRKKGCIHTYK------GHTRGVNVLRFTPDGR-WIVSGGEDNVVKVWDLTAGKL 177
Query: 431 VKSFSS--GKREGGDF 444
+ F S GK + DF
Sbjct: 178 LHEFKSHEGKIQSLDF 193
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 49/158 (31%), Positives = 77/158 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SP F S S+D +W + D Y + H V C++F +S LA+G
Sbjct: 390 SPHSLFFASASYDHTARLWSF-------DRTYPL-RIYAGHLAGVDCVKFHPNSNYLATG 441
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++W + G +R L H V L FS +G ++S D ++ L SG L
Sbjct: 442 STDKTVRLWSAQQGNSVR-LFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLY 500
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
K+ GH+ + F+ D S + +AS D +V++WD+KS
Sbjct: 501 KDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Score = 173 (66.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 54/188 (28%), Positives = 79/188 (42%)
Query: 192 MKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDL 251
++ D ED T + G RF PD L+SCS D I WD S +
Sbjct: 320 LEVDEEDR--TATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLES--FTNTV 375
Query: 252 QYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 311
YQ H V ++ S S AS S D ++W LR + H GV
Sbjct: 376 LYQG------HAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLR-IYAGHLAGVDC 428
Query: 312 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371
+ F + + + + S D T R+ + G ++ F GH V F+ +G +V+A D
Sbjct: 429 VKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQL 488
Query: 372 VKVWDLKS 379
+K+WDL S
Sbjct: 489 LKLWDLAS 496
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/115 (32%), Positives = 61/115 (53%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
C FSP+GQ+LVS D +++WD SG L KDL D+ + + FS DS +
Sbjct: 470 CLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDD--------ITSVTFSLDSSV 521
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI 332
+AS S D +++W I+S + + SE + V++ S +L+ F + +R+
Sbjct: 522 IASASMDNSVRIWDIKSKHNSTPADGSSSELLG--VYTGQMSTVLNVQFMAGSRL 574
Score = 144 (55.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 53/213 (24%), Positives = 94/213 (44%)
Query: 299 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 358
R++ H V S F D S +LS S D++ R L+S ++GH+ V D +
Sbjct: 332 RKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISP 391
Query: 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 418
+AS D T ++W T L+ + G A V+ V P N +++ +
Sbjct: 392 HSLFFASASYDHTARLWSFDRTYPLRIYA------GHLAGVDCVKFHP-NSNYLATGSTD 444
Query: 419 SSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
++ + + Q G V+ F+ G SP G+++ GED+ L + SG L
Sbjct: 445 KTVRLWSAQQGNSVRLFTG---HCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYK 501
Query: 478 LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ H D+ VT +++A+ D ++++W
Sbjct: 502 DLHGHTDDITSVTFSLDSSVIASASMDNSVRIW 534
Score = 116 (45.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 41/153 (26%), Positives = 66/153 (43%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V F DS L S S+D I+ W + S L + H+ V L S
Sbjct: 338 HCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTV-LYQGHAYPVWDLDISPHSLFF 396
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
S S+D TAR+ L+ + GH + V+ F + + + T S+D TV++W + +
Sbjct: 397 ASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 456
Query: 382 CLQTFKPP-PPLRGGDASVNSVHLFPKNPDHIV 413
++ F P+R S N +L D ++
Sbjct: 457 SVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLL 489
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/89 (23%), Positives = 35/89 (39%)
Query: 176 LLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDG 235
+L D + T QD T S+ + T+ A SPD + L + +
Sbjct: 232 ILQKEEDLDFLQETIKSVQDGPPSLITIYSYAF-YNTEQLLNTAEASPDNKLLATGLNNS 290
Query: 236 FIEVWDYLSGKLK-KDLQYQADETFMMHD 263
I++W L+ K K K Q +++D
Sbjct: 291 SIKLWS-LTSKFKSKPHQIDVSHIHLIND 318
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 209 (78.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 54/163 (33%), Positives = 80/163 (49%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
RF+P G + VSCS+D +W S QA F+ H V C++F +S +A
Sbjct: 499 RFAPHGYYFVSCSYDKTARLWATDSN--------QALRVFVGHLSDVDCVQFHPNSNYVA 550
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
+GS D +++W +GQ +R L H V+SL FS G + S S D I L +G
Sbjct: 551 TGSSDRTVRLWDNMTGQSVR-LMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGS 609
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL-KSTD 381
L+ H+S V F+ DG+ + A D + +WD K T+
Sbjct: 610 LVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTE 652
Score = 160 (61.4 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 246 KLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAH 305
++ D + + M H V F+ + +L S S+D I++W + + C+ R H
Sbjct: 433 RMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTY-RGH 491
Query: 306 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365
V + F+ G +S S+D TAR+ S + L+ F GH S V+ F + + V T
Sbjct: 492 VYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVAT 551
Query: 366 ASSDCTVKVWD 376
SSD TV++WD
Sbjct: 552 GSSDRTVRLWD 562
Score = 159 (61.0 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 58/230 (25%), Positives = 97/230 (42%)
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S D +++ RSG+ R L H+ V F+ + + +LS S DST R+ L + +
Sbjct: 427 SADINVRMLDDRSGEVTRSL-MGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCV 485
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 401
+RGH V D F G V+ S D T ++W S L+ F G + V+
Sbjct: 486 VTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFV------GHLSDVDC 539
Query: 402 VHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 460
V P N +++ + ++ + + GQ V+ + K G + S G ++
Sbjct: 540 VQFHP-NSNYVATGSSDRTVRLWDNMTGQSVRLMTGHK---GSVSSLAFSACGRYLASGS 595
Query: 461 EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
D N+ + +G L + H V +T +LA G D + LW
Sbjct: 596 VDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S +C +F P+ ++ + S D + +WD ++G Q+ H +V +
Sbjct: 532 GHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTG--------QSVRLMTGHKGSVSSLA 583
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
FS LASGS D I +W + +G + L R H+ VT++ FSRDG+ + + D+
Sbjct: 584 FSACGRYLASGSVDHNIIIWDLSNGSLVTTLLR-HTSTVTTITFSRDGTVLAAAGLDN 640
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 43/168 (25%), Positives = 72/168 (42%)
Query: 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM 277
CA F+P+ L+SCS D I +W L+ + T+ H V + F+
Sbjct: 456 CA-FAPEMNLLLSCSEDSTIRLWSLLT--------WSCVVTYRGHVYPVWDVRFAPHGYY 506
Query: 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
S S D ++W S Q LR H V + F + + + + S D T R+ +
Sbjct: 507 FVSCSYDKTARLWATDSNQALRVFV-GHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMT 565
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
G+ ++ GH V+ F+ G + + S D + +WDL + + T
Sbjct: 566 GQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTT 613
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 247 LKKD-LQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAH 305
L KD L T + + V C E S DS MLA G D +++W + + LR L+ A
Sbjct: 360 LSKDQLPSAVFYTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAK-LRTLKDAD 418
Query: 306 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365
S ++ S D R+ +SG++ + GH+ V F + + +++
Sbjct: 419 SL-----------RELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLS 467
Query: 366 ASSDCTVKVWDLKSTDCLQTFK 387
S D T+++W L + C+ T++
Sbjct: 468 CSEDSTIRLWSLLTWSCVVTYR 489
Score = 63 (27.2 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 197 EDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSF-DGFIEVWDYLSGKLK 248
+D P+ + +T+ + CA S D L +C F D + +W KL+
Sbjct: 362 KDQLPSAVFYTV-LNSHQGVTCAEISDDSTML-ACGFGDSSVRIWSLTPAKLR 412
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 202 (76.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 77/312 (24%), Positives = 136/312 (43%)
Query: 204 LSHTIK--FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261
L H I G K +F+ G L S D I +W+ + G+ + Y
Sbjct: 51 LEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWN-VYGEC---INYSV---LKG 103
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H T+L + +S DS + + D I VW G+ ++R+ R HS V S +R G +
Sbjct: 104 HKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRI-REHSGVVNSCCPARRGPPL 162
Query: 322 LST-SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
+++ S D +ARI +S F+ H V F++ +++T D ++VWD+++
Sbjct: 163 VASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQ 221
Query: 381 -DCLQTFKP-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 438
D L T + S + +L + D+ C K I + +K+F+ +
Sbjct: 222 EDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNS--C-KIWDIRPYAPPNRNIKTFNGAQ 278
Query: 439 RE-GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNL 497
+ + + S G I C DR +Y + + +L++ + H V VT HP+ +
Sbjct: 279 NNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPI 338
Query: 498 LATYGEDCTMKL 509
+A+ D T+ L
Sbjct: 339 IASCSSDKTIYL 350
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 40/182 (21%), Positives = 84/182 (46%)
Query: 198 DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE 257
++Y +++++ G K +S D + + D I VWD G+L K ++ +
Sbjct: 90 NVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIR---EH 146
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
+ +++ C R ++ASGS D +++ RS + H VTS+ FS
Sbjct: 147 SGVVNS----CCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ--HKYPVTSVCFSDA 200
Query: 318 GSQILSTSFDSTARIHGLKSGK-LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
Q+++ D+ R+ +++ + L H + + DG+ +++ S D + K+WD
Sbjct: 201 SDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWD 260
Query: 377 LK 378
++
Sbjct: 261 IR 262
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FS L++ D I VWD + ++D Y T H +T+ S+D L S
Sbjct: 197 FSDASDQLITGGIDNVIRVWDIRN---QEDPLY----TLASHQDTITSTSVSKDGAYLLS 249
Query: 281 GSQDGKIKVWRIRS----GQCLRRLERAHSEGVTSLV---FSRDGSQILSTSFDSTARIH 333
S D K+W IR + ++ A + +L+ +S DG +I S D I
Sbjct: 250 NSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIW 309
Query: 334 GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
+ +L GHS VN+ F + + + SSD T+ + ++K
Sbjct: 310 DTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEIK 354
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 209 (78.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+VS S D + VWD +G Q M H V C+++ D + SG+ D +
Sbjct: 527 VVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 576
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + GH
Sbjct: 577 KVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 633
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
S + + D +V+ ++D TVK+WD+K+ CLQT + P ++V + F K
Sbjct: 634 QS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQGP---HKHQSAVTCLQ-FNK 687
Query: 408 NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 464
N ++ + ++ + L+ G+ +++ + + G V + + C RN
Sbjct: 688 N--FVITSSDDGTVKLWDLRTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 743
Score = 184 (69.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 70/256 (27%), Positives = 120/256 (46%)
Query: 262 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
HD+ V+ C++F + SGS D +KVW +G+CLR L H+ GV S RD
Sbjct: 432 HDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQM-RDNI- 486
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
I+S S D T ++ ++G+ + GH+S V + ++ RVV+ S D T++VWD+++
Sbjct: 487 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETG 544
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNP-----DHIV-VCNKTSSIYIMTLQGQVVKSF 434
CL L G A+V V + D +V V + + + TLQG + +
Sbjct: 545 QCLHV------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 598
Query: 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494
S + +G V+ + D ++ + ++G H + H+ G+
Sbjct: 599 SL-QFDGIHVVSGSL------------DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD- 644
Query: 495 RNLLATYGEDCTMKLW 510
N+L + D T+K+W
Sbjct: 645 -NILVSGNADSTVKIW 659
Score = 180 (68.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 54/178 (30%), Positives = 88/178 (49%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G H C +F G +VS S D ++VW ++GK + T + H V
Sbjct: 431 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR--------TLVGHTGGVWSS 480
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ RD+ ++ SGS D +KVW +G+C+ L H+ V + +++S S D+T
Sbjct: 481 QM-RDN-IIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLHE--KRVVSGSRDAT 535
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++ CL T +
Sbjct: 536 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 591
Score = 175 (66.7 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 53/180 (29%), Positives = 94/180 (52%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+ G + C ++ DG+ +VS ++D ++VWD + + L T H V
Sbjct: 549 VLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLH-----TLQGHTNRVY 598
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
++F D + SGS D I+VW + +G C+ L H + +TS + +D ++S + D
Sbjct: 599 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GH-QSLTSGMELKDNI-LVSGNAD 653
Query: 328 STARIHGLKSGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
ST +I +K+G+ L+ +G H S V F + V+T+S D TVK+WDL++ + ++
Sbjct: 654 STVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLRTGEFIR 711
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 44/149 (29%), Positives = 75/149 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D T HT++ G + +F DG +VS S D I VWD +G
Sbjct: 578 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--------C 626
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLV 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 627 IHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQ 684
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLK 342
F+++ ++++S D T ++ L++G+ ++
Sbjct: 685 FNKNF--VITSSDDGTVKLWDLRTGEFIR 711
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 526 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 583
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 584 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 631
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK-LEHLMKVHEKDVIGVTHHPHRNL 497
G + + + K + D + + ++G+ L+ L H+ ++N
Sbjct: 632 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNF 689
Query: 498 LATYGEDCTMKLW 510
+ T +D T+KLW
Sbjct: 690 VITSSDDGTVKLW 702
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 208 (78.3 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 72/308 (23%), Positives = 129/308 (41%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265
HT K C ++P+G+ LV+ S G +W+ L+ + LQ HD
Sbjct: 118 HTSSNKVKYPINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQ--------AHDSA 169
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG-VTSLVFSRDGSQILST 324
V I +S + + + SG G IK W+ ++ +AH + + L FS ++ S
Sbjct: 170 VRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNV--KIFKAHEQSKIRGLSFSPTDLKLASC 227
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
+ D +I + GH V + S +V+ D +K+WD KS+ +
Sbjct: 228 ADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNIT 287
Query: 385 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDF 444
T L G ++V+ V + +N + IV + + + ++ +K + K G +
Sbjct: 288 T------LHGHKSTVSKVE-WNQNGNWIVSASSDQLLKVFDIR--TMKEMQTFKGHGKEV 338
Query: 445 VAACVSPKGEWIYCVGED--RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 502
A + P E ++ G+ + LY + H+ DV ++ HP ++LA+
Sbjct: 339 TALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGS 398
Query: 503 EDCTMKLW 510
D T K W
Sbjct: 399 NDHTTKFW 406
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 82/324 (25%), Positives = 131/324 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
E Y P H TK + F G L+SCS D I++W+ + +
Sbjct: 272 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR-------RC 324
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 325 LRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPD 384
Query: 316 RDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++V
Sbjct: 385 EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV 444
Query: 375 WDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
W+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 445 WEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF-- 494
Query: 433 SFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDVI 487
+ K G VA AC V + Y + D N L + ++ KL K H+K I
Sbjct: 495 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCI 554
Query: 488 GVTHHPHR-NLLATYGEDCTMKLW 510
G HPH + + T G D +KLW
Sbjct: 555 GAVWHPHETSKVITCGWDGLIKLW 578
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 82/324 (25%), Positives = 131/324 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
E Y P H TK + F G L+SCS D I++W+ + +
Sbjct: 272 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR-------RC 324
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 325 LRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPD 384
Query: 316 RDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++V
Sbjct: 385 EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV 444
Query: 375 WDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
W+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 445 WEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF-- 494
Query: 433 SFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDVI 487
+ K G VA AC V + Y + D N L + ++ KL K H+K I
Sbjct: 495 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCI 554
Query: 488 GVTHHPHR-NLLATYGEDCTMKLW 510
G HPH + + T G D +KLW
Sbjct: 555 GAVWHPHETSKVITCGWDGLIKLW 578
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 82/324 (25%), Positives = 131/324 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
E Y P H TK + F G L+SCS D I++W+ + +
Sbjct: 272 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR-------RC 324
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 325 LRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPD 384
Query: 316 RDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++V
Sbjct: 385 EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV 444
Query: 375 WDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
W+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 445 WEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF-- 494
Query: 433 SFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDVI 487
+ K G VA AC V + Y + D N L + ++ KL K H+K I
Sbjct: 495 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCI 554
Query: 488 GVTHHPHR-NLLATYGEDCTMKLW 510
G HPH + + T G D +KLW
Sbjct: 555 GAVWHPHETSKVITCGWDGLIKLW 578
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 209 (78.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 49/170 (28%), Positives = 91/170 (53%)
Query: 218 CARFSPDGQF-LVSCSFDGFIEVWDYLSGKLKKD-LQYQADETFMMHDETVLCIEFSRDS 275
C + +G S S DG ++VW + K ++ + + HD+ V C+ ++ ++
Sbjct: 431 CVAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNN 490
Query: 276 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 335
+++A+ SQD KVW S L+ + R H+ GV S+ FS +L++S D T RI +
Sbjct: 491 KLIATASQDKTAKVWLAESNT-LQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSI 549
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
+ +K F + + A F + G +++A+SD +K+W++K+ CLQ+
Sbjct: 550 SNFSCIKRFDQECTILR-AEFLDHGKFIISAASDGLLKLWNIKTNTCLQS 598
Score = 166 (63.5 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQA-DETFMMHDETVLCIEFSRDSEM-LASGSQDG 285
L+S D + +W + KD +A + H T+ C+ + + AS SQDG
Sbjct: 393 LISVGKDCSVRLWRL---QHDKDCSLEALTQQANCHTSTIGCVAMTHNGATGFASVSQDG 449
Query: 286 KIKVWR-IRSGQC-------LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
+KVW+ +RS + LR +H + V + ++ + I + S D TA++ +S
Sbjct: 450 SMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNKLIATASQDKTAKVWLAES 509
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
L RGH+ V F+ V+T+SSDCT+++W + + C++ F
Sbjct: 510 NTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSCIKRF 558
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 57/300 (19%), Positives = 129/300 (43%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
++ +GQ ++ S G ++ D S K++ D+ Q+D F + + C E + LA
Sbjct: 261 YADEGQLIIVASGSGKLQQVDPKSWKIR-DILSQSD--FQI-SRLLHCSELKQ----LAL 312
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA-RIHGLKSGK 339
+ + I V+ + + + ++ L +++ + + F + + L+ + +S +++ +
Sbjct: 313 VTTEQNILVYDVETLEPIKHLV-GYNDEILDMCFMGEHDRYLAVATNSKHFKLYDTEHDM 371
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK-STDC-LQTFKPPPPLRGGDA 397
K GHS V + + +++ DC+V++W L+ DC L+ +
Sbjct: 372 NCKLIVGHSDTVMSLAASQN--LLISVGKDCSVRLWRLQHDKDCSLEALTQQANCH--TS 427
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTL--QGQVVKSFSSGKREGG---DFVAACVS-- 450
++ V + ++ S+ + L + S+S R D CV+
Sbjct: 428 TIGCVAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYA 487
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
P + I +D+ + +S L+ +++ H + V V P ++ T DCT+++W
Sbjct: 488 PNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIW 547
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 43/164 (26%), Positives = 71/164 (43%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA- 279
F + LV+ G + +W +GKL K + Q H V+ +EFS ++
Sbjct: 84 FGLSQEHLVTAHRSGLLRLWQLDTGKLVKLWKAQ-------HKGPVIRVEFSPCGRLICT 136
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD--GSQILSTSFDSTARIHGLKS 337
SG D +++W + CL L+ LVF + +I + D+T ++
Sbjct: 137 SGGADATLRLWDYSNNSCLGALKDFPGPAWL-LVFHPNVLRKEIYAGGSDNTVYAWNYET 195
Query: 338 GKLLKEFRGHSSYVNDAIFTNDGS---RVVTASSDCTVKVWDLK 378
L+ + RGH S V F ++ S +VT S D + VW L+
Sbjct: 196 KTLVHKMRGHLSQVTGLSFKSNASDCNEIVTVSRDKVMIVWQLQ 239
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 45/125 (36%), Positives = 69/125 (55%)
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLVFSRD 317
F HD V ++FS S +LA+G D ++K+W + +C + + S G+TS+ F
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSA 377
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
GS +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K+WDL
Sbjct: 378 GSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 378 KSTDC 382
+S C
Sbjct: 438 RSKVC 442
Score = 185 (70.2 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 67/279 (24%), Positives = 123/279 (44%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
+FSP + L + D +++W+ L + + + IEF L
Sbjct: 329 QFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNA------GITSIEFDSAGSYLL 382
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG- 338
+ S D ++W + + LR HS V S F D ++I+S S D T ++ L+S
Sbjct: 383 AASNDFASRIWTVDDNR-LRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKV 441
Query: 339 -KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA 397
+ F G S ND + T V++ D ++ WD+++ ++ + L G
Sbjct: 442 CNIKTVFAGSSC--NDIVCTEQC--VMSGHFDKKIRFWDIRTESIVKELE----LLG--- 490
Query: 398 SVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSS-GKREGGDFVAACVSPKGEW 455
+ ++ L + + ++ C++ + I+ L+ G V ++FS+ G + G D+ SP G +
Sbjct: 491 RITALDLNSERTE-LLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGNY 549
Query: 456 IYCVGEDRNLYCFSHQSGKLEH-LMKVHEKDVIGVTHHP 493
+ D LY ++ +GKLE L K H + V P
Sbjct: 550 VAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAWSP 588
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 55/260 (21%), Positives = 106/260 (40%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G+ + F G +L++ S D +W +L+ T H VL +
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLR--------HTLTGHSGKVLSAK 415
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F D+ + SGS D +K+W +RS C + A S +V + ++S FD
Sbjct: 416 FLLDNARIVSGSHDRTLKLWDLRSKVCNIKTVFAGSS-CNDIVCTEQC--VMSGHFDKKI 472
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP 390
R +++ ++KE + ++ + ++T S D +K+ DL+ QTF
Sbjct: 473 RFWDIRTESIVKELE-LLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQG 531
Query: 391 PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFSSGKREGGDFVAACV 449
G D + V +F + +++ + ++Y+ L G++ ++ + K A
Sbjct: 532 FKCGSDWT--RV-VFSPDGNYVAAGSADGALYVWNVLTGKLERTLA--KHHSSPINAVAW 586
Query: 450 SPKGEWIYCVGEDRNLYCFS 469
SP G + V + +S
Sbjct: 587 SPAGAHVVSVDKGNKAVLWS 606
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 205 (77.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 56/170 (32%), Positives = 83/170 (48%)
Query: 209 KFGTKSH-AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TKS+ + F P ++++ G I++WDY G L + DE H+ V
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLID----RFDE----HEGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
+ F + SG D KIKVW ++ +CL L H + + ++ F + I+S S D
Sbjct: 56 GVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTL-LGHLDYIRTVQFHHENPWIVSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T RI +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 115 QTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 116 (45.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336
+LAS G I++W R G + R + H V + F +S D ++ K
Sbjct: 24 ILAS-LHSGVIQLWDYRMGTLIDRFDE-HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYK 81
Query: 337 SGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD 396
+ + L GH Y+ F ++ +V+AS D T+++W+ +S C+ L G +
Sbjct: 82 THRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISV------LTGHN 135
Query: 397 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFS 435
V PK D +V + ++ + + KS S
Sbjct: 136 HYVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKKSAS 173
Score = 55 (24.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
++++++ H++ V + HP L+ + +D +KLW+
Sbjct: 196 VKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWR 232
Score = 48 (22.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
+VK G G ++ A P I +DR + + K + ++ H +V
Sbjct: 195 IVKYVLEGHDRGVNW--ASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
V H ++++ + ED ++++W
Sbjct: 253 SVMFHAKQDIIVSNSEDKSIRVW 275
Score = 40 (19.1 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 465 LYCFSHQSGKLEHLMKVHE--KDVIGVTHH 492
LY + KL LMK+ E +V+G H+
Sbjct: 708 LYLITGNLDKLSKLMKIAEVKNNVMGQFHN 737
Score = 40 (19.1 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 392 LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVS 450
LRG +V+SV +F D IV ++ SI + + +++F +RE F
Sbjct: 244 LRGHMNNVSSV-MFHAKQDIIVSNSEDKSIRVWDATKRTGIQTF---RREHDRF------ 293
Query: 451 PKGEWIYCVGEDRNLYCFSHQSGKL 475
WI V + NL H +G +
Sbjct: 294 ----WILAVHPEINLLAAGHDNGMI 314
>UNIPROTKB|Q5ZL33 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9031 "Gallus gallus" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0005102 GO:GO:0005681 GO:GO:0000122 GO:GO:0030512 HSSP:P63005
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M EMBL:AJ719901
IPI:IPI00577361 RefSeq:NP_001006247.2 UniGene:Gga.44357
ProteinModelPortal:Q5ZL33 STRING:Q5ZL33 PRIDE:Q5ZL33
Ensembl:ENSGALT00000021374 GeneID:418175 KEGG:gga:418175
InParanoid:Q5ZL33 NextBio:20821378 Uniprot:Q5ZL33
Length = 350
Score = 201 (75.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 70/255 (27%), Positives = 121/255 (47%)
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
TF+ H V ++D+ A+ + D KVW SG L L AH V S+ F++D
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELITL--AHKHIVKSVDFTQD 111
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEF-RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWD 376
+ +L+ D RI+ L + + GH+S + A++++D ++++A D TV++WD
Sbjct: 112 SNYLLTGGQDKLLRIYDLSKPEAEPDVVSGHTSGIKKALWSSDDKQILSAD-DKTVRLWD 170
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS 436
+ST + K L SV+S+ P+ ++ KT + + Q+ KSF +
Sbjct: 171 -RST--MTEVKA---LNVA-MSVSSMEYVPEGQILVITYGKTIAFHSAETLEQI-KSFEA 222
Query: 437 GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496
+A + P+ E + GED LY + + +G+ K H + V P
Sbjct: 223 P----ATINSASLHPEKECLVAGGEDFKLYKYDYNTGEELESYKGHFGPIHCVRFSPDGE 278
Query: 497 LLATYGEDCTMKLWK 511
L A+ ED T++LW+
Sbjct: 279 LYASGSEDGTLRLWQ 293
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 69/297 (23%), Positives = 124/297 (41%)
Query: 188 GTAAMKQ-DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGK 246
G ++Q D D T L H K A + D + + D +VWD +SG
Sbjct: 39 GKPMLRQGDTGDWIGTFLGH------KGAVWGATLNKDATKAATAAADFTAKVWDAVSG- 91
Query: 247 LKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAH 305
DE + H V ++F++DS L +G QD ++++ + + + H
Sbjct: 92 ---------DELITLAHKHIVKSVDFTQDSNYLLTGGQDKLLRIYDLSKPEAEPDVVSGH 142
Query: 306 SEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365
+ G+ ++S D QILS D T R+ + +K S V+ + +G +++
Sbjct: 143 TSGIKKALWSSDDKQILSAD-DKTVRLWDRSTMTEVKALNVAMS-VSSMEYVPEG-QILV 199
Query: 366 ASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 425
+ T+ ++ + +++F+ P A++NS L P+ + +V + +Y
Sbjct: 200 ITYGKTIAFHSAETLEQIKSFEAP-------ATINSASLHPEK-ECLVAGGEDFKLYKYD 251
Query: 426 LQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMK 480
G+ ++S+ K G SP GE +Y G ED L + GK L K
Sbjct: 252 YNTGEELESY---KGHFGPIHCVRFSPDGE-LYASGSEDGTLRLWQTTVGKTYGLWK 304
>UNIPROTKB|P73595 [details] [associations]
symbol:slr1410 "Uncharacterized WD repeat-containing
protein slr1410" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR ProtClustDB:CLSK501008 PIR:S77305
RefSeq:NP_440959.1 RefSeq:YP_005651018.1 ProteinModelPortal:P73595
IntAct:P73595 STRING:P73595 GeneID:12255184 GeneID:954269
KEGG:syn:slr1410 KEGG:syy:SYNGTS_1065 PATRIC:23839192 OMA:NTIRIRD
Uniprot:P73595
Length = 334
Score = 200 (75.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 69/265 (26%), Positives = 119/265 (44%)
Query: 251 LQYQADETFMMHD---ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE 307
+Q + +++ H E ++ I +S+D L S + DG K+W G+ +R
Sbjct: 43 IQLEVIKSYQGHTLKGEAIIQIHYSQDGNYLLSTATDGLAKLWTA-DGELVREFAGKPVA 101
Query: 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
+ + FSRDG I++ ++ ARI ++ G +L E GH+S V D +F +D VVT+S
Sbjct: 102 MIFNGAFSRDGKAIITAGYNGVARIWDVQ-GNVLGEILGHTSAVTDVVFLSDDMGVVTSS 160
Query: 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 427
D T++ W + L T P R D F + I V I ++
Sbjct: 161 DDGTIEGWS-NIKEPLFTVTRPGVSRNMD--------FNAQTNLIAVTQDIGEITLLNPA 211
Query: 428 GQVVKSFSS--GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKD 485
G+VV+ + G+ DF S G+ + G D F+ ++ + + +
Sbjct: 212 GKVVRIIETDQGRLNDVDF-----SQDGKLLVTAGFDGTARVFNLDGQEILKIDVLDDGW 266
Query: 486 VIGVTHHPHRNLLATYGEDCTMKLW 510
V GV + NL+AT +D +++W
Sbjct: 267 VTGVAINQD-NLIATVSDDGILRVW 290
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 202 (76.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 47/139 (33%), Positives = 73/139 (52%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G ++ C FSP G L S S+D + +WD +G+L + L H + V I+
Sbjct: 304 GHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLP--------AHSDPVSGID 355
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F RD ++ S S DG I++W +GQCLR L + VT++ FS +G IL+ + DS
Sbjct: 356 FCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCI 415
Query: 331 RI--HGLKSGKLLKEFRGH 347
R+ + K+ K ++GH
Sbjct: 416 RLWDYIAHPSKVKKTYQGH 434
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 59/245 (24%), Positives = 101/245 (41%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
R SP+G+++ S S DG +WD +G D T + H V C+ +S DS LA
Sbjct: 187 RISPNGRWIASASADGTARIWDAETGA-------HID-TLVGHMAGVSCLAWSPDSGTLA 238
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
+GS D I++W + + + + + G++I S G G
Sbjct: 239 TGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGGGGPARGT 298
Query: 340 LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP-PPPLRGGDAS 398
+ GH +YV F+ G+ + + S D V +WD+++ +++ P+ G D
Sbjct: 299 R-RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGID-- 355
Query: 399 VNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIY 457
F ++ +V C+ I I T GQ +++ + C SP G +I
Sbjct: 356 ------FCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVH--EDNPAVTNVCFSPNGRYIL 407
Query: 458 CVGED 462
D
Sbjct: 408 AFNLD 412
Score = 139 (54.0 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 299 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 358
RR H V L FS G+ + S S+D + +++G+L++ HS V+ F
Sbjct: 299 RRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCR 358
Query: 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT 418
DG+ VV+ S+D +++WD + CL+T + + +V +V F N +I+ N
Sbjct: 359 DGTLVVSCSTDGLIRIWDTATGQCLRTL-----VHEDNPAVTNV-CFSPNGRYILAFNLD 412
Query: 419 SSI----YIM-------TLQGQVVKSFSSG 437
S I YI T QG V FS G
Sbjct: 413 SCIRLWDYIAHPSKVKKTYQGHVNTGFSIG 442
Score = 116 (45.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 299 RRLE-RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT 357
RRLE R HS+ + + S +G I S S D TARI ++G + GH + V+ ++
Sbjct: 172 RRLELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWS 231
Query: 358 NDGSRVVTASSDCTVKVWD 376
D + T S D +++WD
Sbjct: 232 PDSGTLATGSDDKAIRLWD 250
Score = 57 (25.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 450 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509
SPKG + D ++ + ++G+L + H V G+ L+ + D +++
Sbjct: 315 SPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRI 374
Query: 510 W 510
W
Sbjct: 375 W 375
Score = 52 (23.4 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGK 246
G + C +SPD L + S D I +WD ++ +
Sbjct: 220 GHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAE 255
Score = 49 (22.3 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 363 VVTASSDCTVKVWDLKSTDCLQ 384
V +AS D + +WD+KS + +Q
Sbjct: 489 VASASEDGHIVLWDVKSKEVVQ 510
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 207 (77.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 82/324 (25%), Positives = 131/324 (40%)
Query: 197 EDMY-PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
E Y P H TK + F G L+SCS D I++W+ + +
Sbjct: 356 EKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR-------RC 408
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
TF+ H + V I F+ S + D +K+W +GQC+ R
Sbjct: 409 LRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPD 468
Query: 316 RDGSQILSTSFDSTARIH-GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
D + + ++SG++++E+ H VN +F ++ R V+ S D +++V
Sbjct: 469 EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV 528
Query: 375 WDLKSTDCLQTFK--PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
W+ D FK P + S+ +V L P N + + + I I Q +
Sbjct: 529 WEW---DIPVDFKYIAEPSMH----SMPAVTLSP-NGKWLACQSMDNQILIFGAQNRF-- 578
Query: 433 SFSSGKREGGDFVA--AC-VSPKGEWIYCVGEDRN--LYCFSHQSGKLEHLMKVHEKDVI 487
+ K G VA AC V + Y + D N L + ++ KL K H+K I
Sbjct: 579 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCI 638
Query: 488 GVTHHPHR-NLLATYGEDCTMKLW 510
G HPH + + T G D +KLW
Sbjct: 639 GAVWHPHETSKVITCGWDGLIKLW 662
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 202 (76.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 72/298 (24%), Positives = 125/298 (41%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F P G L S FD I +W+ D A T H V+ +
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYG-----DCDNYA--TLKGHSGAVMELH 143
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDST 329
++ D ML S S D + VW +G+ ++RL + H+ V S +R G Q++ T S D T
Sbjct: 144 YNTDGSMLFSASTDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGT 202
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKP 388
++ ++ ++ F+ ++Y A+ ND S ++++ D +KVWDL+ T +
Sbjct: 203 VKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 260
Query: 389 -PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447
+ G S +L D+ V + + + + VK F +
Sbjct: 261 HADSVTGLSLSSEGSYLLSNAMDNTV---RIWDVRPFAPKERCVKIFQGNVHNFEKNLLR 317
Query: 448 CV-SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
C SP G I DR +Y + S ++ + + H V + HP ++ + D
Sbjct: 318 CSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 48/222 (21%), Positives = 95/222 (42%)
Query: 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSS 349
R S Q L H V F G+ + S FD + + +GHS
Sbjct: 78 RCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSG 137
Query: 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
V + + DGS + +AS+D TV VWD ++ + ++ L+G + VNS + + P
Sbjct: 138 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR------LKGHTSFVNSCYPARRGP 191
Query: 410 DHIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
+ + ++ + ++ + V++F + + +A + + I G D ++ +
Sbjct: 192 QLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ----VLAVTFNDTSDQIISGGIDNDIKVW 247
Query: 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ KL + M+ H V G++ + L + D T+++W
Sbjct: 248 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 206 (77.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 79/306 (25%), Positives = 137/306 (44%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G + H C + D LV+ S D ++VW G ++ Y T + H V
Sbjct: 253 GHEDHVITCMQIHDD--VLVTGSDDNTLKVWCIDKG----EVMY----TLVGHTGGVWTS 302
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ S+ + SGS D +KVW G L L+ H+ V + + GS +++ S D+T
Sbjct: 303 QISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAMA--GSILVTGSRDTT 359
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
R+ ++SG+ L GH + V F DG+ VV+ D TVK+W+ + C++T
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRT---- 413
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKT--SSIYIMTL---QGQVVKSFSSGKREGGDF 444
L G + V S+ LF + +VC+ + +SI + +GQ + G
Sbjct: 414 --LTGHNNRVYSL-LFES--ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS---- 464
Query: 445 VAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+ + + +G + D ++ + G H++ H + + RN++AT +D
Sbjct: 465 LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG-RNMVATSSDD 523
Query: 505 CTMKLW 510
T+KLW
Sbjct: 524 GTVKLW 529
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 46/171 (26%), Positives = 83/171 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F DG +VS +D +++W+ +G+ + T H+ V +
Sbjct: 376 GHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIR--------TLTGHNNRVYSLL 425
Query: 271 FSRDSEMLASGSQDGKIKVW---RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
F + ++ SGS D I+VW R +C+ L+ H+ +TS + R G+ ++S + D
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ-GHTS-LTSGMQLR-GNILVSCNAD 482
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S R+ + G + GH S + + + V T+S D TVK+WD++
Sbjct: 483 SHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLWDIE 532
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 206 (77.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 79/306 (25%), Positives = 137/306 (44%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G + H C + D LV+ S D ++VW G ++ Y T + H V
Sbjct: 253 GHEDHVITCMQIHDD--VLVTGSDDNTLKVWCIDKG----EVMY----TLVGHTGGVWTS 302
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ S+ + SGS D +KVW G L L+ H+ V + + GS +++ S D+T
Sbjct: 303 QISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAMA--GSILVTGSRDTT 359
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
R+ ++SG+ L GH + V F DG+ VV+ D TVK+W+ + C++T
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRT---- 413
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKT--SSIYIMTL---QGQVVKSFSSGKREGGDF 444
L G + V S+ LF + +VC+ + +SI + +GQ + G
Sbjct: 414 --LTGHNNRVYSL-LFES--ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS---- 464
Query: 445 VAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504
+ + + +G + D ++ + G H++ H + + RN++AT +D
Sbjct: 465 LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG-RNMVATSSDD 523
Query: 505 CTMKLW 510
T+KLW
Sbjct: 524 GTVKLW 529
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 46/171 (26%), Positives = 83/171 (48%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G + C +F DG +VS +D +++W+ +G+ + T H+ V +
Sbjct: 376 GHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIR--------TLTGHNNRVYSLL 425
Query: 271 FSRDSEMLASGSQDGKIKVW---RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
F + ++ SGS D I+VW R +C+ L+ H+ +TS + R G+ ++S + D
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ-GHTS-LTSGMQLR-GNILVSCNAD 482
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
S R+ + G + GH S + + + V T+S D TVK+WD++
Sbjct: 483 SHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLWDIE 532
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 198 (74.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 61/201 (30%), Positives = 100/201 (49%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G C +F+ + ++S S DG + WD S +++ +Q DE+ + + ++
Sbjct: 107 GHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEP-IQI-LDES----QDGISSLK 160
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
S + E+L +GS DG+++ + +R GQ +++ S +T + FSRDG LS+S DST
Sbjct: 161 VS-EHELL-TGSVDGRVRRYDLRMGQL--QVDYIGSP-ITCVCFSRDGQCTLSSSLDSTV 215
Query: 331 RIHGLKSGKLLKEFRGH--SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388
R+ +G++L E+ GH Y D T+ + V++ S D V WDL T K
Sbjct: 216 RLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSL--TLKL 273
Query: 389 PPPLRGGDASVNSVHLFPKNP 409
P G A V S+ P P
Sbjct: 274 PV----GKAVVQSLSFHPTEP 290
Score = 170 (64.9 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 68/293 (23%), Positives = 129/293 (44%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279
RF+ DG +L++C D +++W G L K T+ H VL + S D+ L
Sbjct: 32 RFNADGNYLLTCGSDKSLKLWSVSRGTLLK--------TYSGHGYEVLDADGSYDNSQLC 83
Query: 280 SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339
S S D + +W + SGQ R+L R H+ V + F+ + + +LS S D T R +S +
Sbjct: 84 SCSSDKTVILWDVASGQVTRKL-RGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRR 142
Query: 340 LLK-EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
+ + S ++ ++ ++T S D V+ +DL+ + P
Sbjct: 143 MEPIQILDESQDGISSLKVSE-HELLTGSVDGRVRRYDLRMGQLQVDYIGSP-------- 193
Query: 399 VNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIY 457
+ V F ++ + + S++ ++ G+++ +S G G + C++ K +
Sbjct: 194 ITCV-CFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYS-GHVNKGYKLDCCLTDKDTHVL 251
Query: 458 CVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
ED ++Y + G L + V + V ++ HP L T E +++W
Sbjct: 252 SCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTSMEG-RVQVW 303
Score = 151 (58.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 34/114 (29%), Positives = 56/114 (49%)
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 325
V + F+ D L + D +K+W + G L+ H V S D SQ+ S S
Sbjct: 28 VRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYS-GHGYEVLDADGSYDNSQLCSCS 86
Query: 326 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
D T + + SG++ ++ RGH+ VN F + + +++ S D TV+ WD +S
Sbjct: 87 SDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRS 140
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 296 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAI 355
Q L R V ++ F+ DG+ +L+ D + ++ + G LLK + GH V DA
Sbjct: 15 QHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDAD 74
Query: 356 FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV 402
+ D S++ + SSD TV +WD+ S T K LRG VN V
Sbjct: 75 GSYDNSQLCSCSSDKTVILWDVASGQV--TRK----LRGHAGKVNCV 115
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 200 (75.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 63/245 (25%), Positives = 106/245 (43%)
Query: 269 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF-D 327
+ S D + LA + D + V R+R G + L H++ V+ + FS DG I+S S D
Sbjct: 109 LAISADGQWLAIAA-DNNVDVRRVRDGMRVETLV-GHTDKVSGVAFSPDGETIVSVSGGD 166
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS--SDCTVKVWDLKSTDCLQT 385
T RI SG L++ + +FT DGS+ +T + D T+K WD + + L T
Sbjct: 167 RTIRIWERASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGT 226
Query: 386 FKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFV 445
P P +N + + PD + + ++ K S + +
Sbjct: 227 -SPQQP-----GFINGLAV---TPDGRKLVGAVRN-FVKAWNLADAKELFSVRGPSLEIN 276
Query: 446 AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 505
VSP W+ ++ + F +GK ++ H+ V+ + P N L + ED
Sbjct: 277 TIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDK 336
Query: 506 TMKLW 510
T+K+W
Sbjct: 337 TVKIW 341
Score = 178 (67.7 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 60/213 (28%), Positives = 99/213 (46%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQ-DGKIKVWRIRSGQCLRRLERAHSEG-VTSLVF 314
ET + H + V + FS D E + S S D I++W SG ++ L A + G TS+VF
Sbjct: 138 ETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTL--ADNLGPTTSVVF 195
Query: 315 SRDGSQILSTSF--DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTV 372
+ DGSQ ++ + D T + + +LL ++N T DG ++V A + V
Sbjct: 196 TPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLVGAVRNF-V 254
Query: 373 KVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432
K W+L D + F +RG +N++ + P N + NK +I I L K
Sbjct: 255 KAWNL--ADAKELFS----VRGPSLEINTIAVSPNNR-WVATANKEGTIMIFDLANG--K 305
Query: 433 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNL 465
++ + G ++ SP G +Y ED+ +
Sbjct: 306 QVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTV 338
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/173 (29%), Positives = 84/173 (48%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
+PDG++L + D I + D + +++ Y + +++ L I S D + LA
Sbjct: 70 TPDGKYLAVATADNQITLIDLAN----QEVVYS--QRSPVNNFADLAI--SADGQWLAIA 121
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKL 340
+ D + V R+R G + L H++ V+ + FS DG I+S S D T RI SG L
Sbjct: 122 A-DNNVDVRRVRDGMRVETLV-GHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNL 179
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTAS--SDCTVKVWDLKSTDCLQTFKPPPP 391
++ + +FT DGS+ +T + D T+K WD + + L T P P
Sbjct: 180 IQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGT-SPQQP 231
Score = 124 (48.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 41/161 (25%), Positives = 73/161 (45%)
Query: 221 FSPDG-QFLVSC-SFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278
F+PDG QF+ D I+ WD + +L L + ++ V + D L
Sbjct: 195 FTPDGSQFITGAIGQDRTIKFWDANTFEL---LGTSPQQPGFINGLAV-----TPDGRKL 246
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
G+ +K W + + L + R S + ++ S + + + + + T I L +G
Sbjct: 247 V-GAVRNFVKAWNLADAKELFSV-RGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANG 304
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
K + RGH +V F+ DG+ + + + D TVK+WDL +
Sbjct: 305 KQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLSA 345
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 203 (76.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH-DETVLCI 269
G + ++ P G L SCS D +++W DLQ + E + + T
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 419
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ MLAS S D +++W + G C+ L + H E V S+ FS DG + S SFD
Sbjct: 420 SNPNSNIMLASASFDSTVRLWDVERGVCIHTLTK-HQEPVYSVAFSPDGKYLASGSFDKC 478
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
I +SG L+ +RG + + + G +V ++SD +V V DL+
Sbjct: 479 VHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDLR 526
Score = 151 (58.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSP 414
Query: 317 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
G S I+ S SFDST R+ ++ G + H V F+ DG + + S
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGS 474
Query: 368 SDCTVKVWDLKSTDCLQTFK 387
D V +W+ +S + +++
Sbjct: 475 FDKCVHIWNTQSGSLVHSYR 494
Score = 146 (56.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 69/342 (20%), Positives = 140/342 (40%)
Query: 155 VPPSRLMALIGQALK-----WQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIK 209
+PPS+ L G + W LL G+ R + L H I+
Sbjct: 170 IPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 229
Query: 210 FG---TKSHAECAR--FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264
G S+ + ++ DG L + S+DGF +W G L T H
Sbjct: 230 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLAS--------TLGQHKG 280
Query: 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 324
+ +++++ + S D +W +G+ ++ HS + + ++ + S
Sbjct: 281 PIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNTTFASC 338
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
S D + L + +K F+GH++ VN + G + + S D T+K+W +K C+
Sbjct: 339 STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH 398
Query: 385 TFKPPPPLRGGDASVNSVHLFP-----KNPD-HIVVCNKT--SSIYIMTLQ-GQVVKSFS 435
L+ + ++ P NP+ +I++ + + S++ + ++ G + + +
Sbjct: 399 D------LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLT 452
Query: 436 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
K + + A SP G+++ D+ ++ ++ QSG L H
Sbjct: 453 --KHQEPVYSVA-FSPDGKYLASGSFDKCVHIWNTQSGSLVH 491
Score = 134 (52.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 66/317 (20%), Positives = 123/317 (38%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM--HD- 263
T+ G +S ++P L S S D +W+ Q HD
Sbjct: 176 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 235
Query: 264 ---ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
+ V ++++ D +LA+GS DG ++W G L + H + +L +++ G+
Sbjct: 236 PSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQ-HKGPIFALKWNKKGNY 293
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
ILS D T I +G+ ++F HS+ D + N+ + + S+D + V L
Sbjct: 294 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCD 352
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKR 439
++TF+ G VN++ P + C+ ++ I ++ Q V + +
Sbjct: 353 RPVKTFQ------GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSK 405
Query: 440 E-----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP 493
E A +P + D + + + G H + H++ V V P
Sbjct: 406 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP 465
Query: 494 HRNLLATYGEDCTMKLW 510
LA+ D + +W
Sbjct: 466 DGKYLASGSFDKCVHIW 482
Score = 45 (20.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 9/33 (27%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPP+ L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPAALISILQKGLQYVEAEISINEDGTVFD 74
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 203 (76.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH-DETVLCI 269
G + ++ P G L SCS D +++W DLQ + E + + T
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 419
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ MLAS S D +++W + G C+ L + H E V S+ FS DG + S SFD
Sbjct: 420 SNPNSNIMLASASFDSTVRLWDVERGVCIHTLTK-HQEPVYSVAFSPDGKYLASGSFDKC 478
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
I +SG L+ +RG + + + G +V ++SD +V V DL+
Sbjct: 479 VHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDLR 526
Score = 151 (58.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSP 414
Query: 317 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
G S I+ S SFDST R+ ++ G + H V F+ DG + + S
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGS 474
Query: 368 SDCTVKVWDLKSTDCLQTFK 387
D V +W+ +S + +++
Sbjct: 475 FDKCVHIWNTQSGSLVHSYR 494
Score = 146 (56.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 69/342 (20%), Positives = 140/342 (40%)
Query: 155 VPPSRLMALIGQALK-----WQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLSHTIK 209
+PPS+ L G + W LL G+ R + L H I+
Sbjct: 170 IPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 229
Query: 210 FG---TKSHAECAR--FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264
G S+ + ++ DG L + S+DGF +W G L T H
Sbjct: 230 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTE-DGNLAS--------TLGQHKG 280
Query: 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 324
+ +++++ + S D +W +G+ ++ HS + + ++ + S
Sbjct: 281 PIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNTTFASC 338
Query: 325 SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
S D + L + +K F+GH++ VN + G + + S D T+K+W +K C+
Sbjct: 339 STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH 398
Query: 385 TFKPPPPLRGGDASVNSVHLFP-----KNPD-HIVVCNKT--SSIYIMTLQ-GQVVKSFS 435
L+ + ++ P NP+ +I++ + + S++ + ++ G + + +
Sbjct: 399 D------LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLT 452
Query: 436 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477
K + + A SP G+++ D+ ++ ++ QSG L H
Sbjct: 453 --KHQEPVYSVA-FSPDGKYLASGSFDKCVHIWNTQSGSLVH 491
Score = 134 (52.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 66/317 (20%), Positives = 123/317 (38%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM--HD- 263
T+ G +S ++P L S S D +W+ Q HD
Sbjct: 176 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 235
Query: 264 ---ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
+ V ++++ D +LA+GS DG ++W G L + H + +L +++ G+
Sbjct: 236 PSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQ-HKGPIFALKWNKKGNY 293
Query: 321 ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST 380
ILS D T I +G+ ++F HS+ D + N+ + + S+D + V L
Sbjct: 294 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCD 352
Query: 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSGKR 439
++TF+ G VN++ P + C+ ++ I ++ Q V + +
Sbjct: 353 RPVKTFQ------GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSK 405
Query: 440 E-----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP 493
E A +P + D + + + G H + H++ V V P
Sbjct: 406 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP 465
Query: 494 HRNLLATYGEDCTMKLW 510
LA+ D + +W
Sbjct: 466 DGKYLASGSFDKCVHIW 482
Score = 45 (20.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 9/33 (27%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPP+ L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPAALISILQKGLQYVEAEISINEDGTVFD 74
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 205 (77.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 52/162 (32%), Positives = 83/162 (51%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
+VS S D + VWD +G Q M H V C+++ D + SG+ D +
Sbjct: 396 VVSGSRDATLRVWDIETG--------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 445
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
KVW + CL L+ H+ V SL F DG ++S S D++ R+ +++G + GH
Sbjct: 446 KVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 502
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
S + + D +V+ ++D TVK+WD+K+ CLQT + P
Sbjct: 503 QS-LTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQGP 542
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 55/202 (27%), Positives = 99/202 (49%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
++S S D ++VW+ +G + T H TV C+ + + SGS+D +
Sbjct: 356 IISGSTDRTLKVWNAETG--------ECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATL 405
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
+VW I +GQCL L H V + + DG +++S ++D ++ ++ L +GH
Sbjct: 406 RVWDIETGQCLHVL-MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 462
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK 407
++ V F DG VV+ S D +++VWD+++ +C+ T L G +++ L
Sbjct: 463 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-LVSG 519
Query: 408 NPDHIV-VCNKTSSIYIMTLQG 428
N D V + + + + TLQG
Sbjct: 520 NADSTVKIWDIKTGQCLQTLQG 541
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 54/178 (30%), Positives = 88/178 (49%)
Query: 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
G H C +F G +VS S D ++VW ++GK + T + H V
Sbjct: 300 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR--------TLVGHTGGVWSS 349
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
+ RD+ ++ SGS D +KVW +G+C+ L H+ V + +++S S D+T
Sbjct: 350 QM-RDN-IIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLHE--KRVVSGSRDAT 404
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++ CL T +
Sbjct: 405 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 460
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
+ G + C ++ DG+ +VS ++D ++VWD + + L T H V
Sbjct: 418 VLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLH-----TLQGHTNRVY 467
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
++F D + SGS D I+VW + +G C+ L H + +TS + +D ++S + D
Sbjct: 468 SLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GH-QSLTSGMELKDNI-LVSGNAD 522
Query: 328 STARIHGLKSGKLLKEFRG---HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQ 384
ST +I +K+G+ L+ +G H S V F + V+T+S D TVK+WDLK+ + ++
Sbjct: 523 STVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFIR 580
Score = 147 (56.8 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA 255
V D T HT++ G + +F DG +VS S D I VWD +G
Sbjct: 447 VWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--------C 495
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLV 313
T H +E +D+ +L SG+ D +K+W I++GQCL+ L+ H VT L
Sbjct: 496 IHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQ 553
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLK 342
F+++ ++++S D T ++ LK+G+ ++
Sbjct: 554 FNKNF--VITSSDDGTVKLWDLKTGEFIR 580
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+++S S D+T R+ +++G+ L GH + V + DG RVV+ + D VKVWD ++
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 452
Query: 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438
CL T L+G N V+ + H+V + +SI + ++ G + + +
Sbjct: 453 ETCLHT------LQG---HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--- 500
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNL 497
G + + + K + D + + ++G+ ++ K VT ++N
Sbjct: 501 --GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF 558
Query: 498 LATYGEDCTMKLW 510
+ T +D T+KLW
Sbjct: 559 VITSSDDGTVKLW 571
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 218 (81.8 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 77/301 (25%), Positives = 140/301 (46%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQY----QADETFMMHDET----VLCIEFS 272
F PD + ++S +DG + +WD +G ++ + + + T++ E + FS
Sbjct: 679 FLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYGLHAGAFS 738
Query: 273 RDSEMLAS-G-SQDGK-IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
D + +A+ G S+D I ++ +G L+++ + HS +++ FS D Q+++ S D T
Sbjct: 739 ADCKQIAAFGWSRDSTCIMLFDTATGD-LQKILKGHSHECSTMAFSSDSRQLVTGSVDCT 797
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
R+ +G L K F GH+ V ++DG ++V+ S + VK+WD + D L+T
Sbjct: 798 VRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGDLLKT---- 852
Query: 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV 449
L G A SV P + I K I+I G + K+ +R G ++
Sbjct: 853 --LASGFAG--SVAFSPDSRQ-IAAGFKDGKIFIWDAAGTLQKTL---ERHPGAIMSIAF 904
Query: 450 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509
SP + + D + + G ++ + H K V + P ++A+ D T+KL
Sbjct: 905 SPDVKQLVTCSTDSTIKRWDITIGGVQEAVG-HSKHVTTMVLSPDGKVIASGSADKTIKL 963
Query: 510 W 510
W
Sbjct: 964 W 964
Score = 205 (77.2 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 55/167 (32%), Positives = 83/167 (49%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSPD + + + DG I +WD +G L+K L+ H ++ I FS D + L +
Sbjct: 863 FSPDSRQIAAGFKDGKIFIWD-AAGTLQKTLE--------RHPGAIMSIAFSPDVKQLVT 913
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S D IK W I G + HS+ VT++V S DG I S S D T ++ +G L
Sbjct: 914 CSTDSTIKRWDITIGGVQEAV--GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDL 971
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
K GH V +F+ D ++V+ SS+ VK+WD + +F+
Sbjct: 972 QKTLTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNSFE 1017
Score = 144 (55.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 55/201 (27%), Positives = 88/201 (43%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G H SPDG+ + S S D I++WD +G L+K T H +TV +
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQK--------TLTGHLDTVEKVV 986
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGSQILSTSFDST 329
FS D+ + S S + +K+W +G+ E S+ V ++V S DG I S +
Sbjct: 987 FSLDNRQIVSCSSEA-VKIWDAATGKVQNSFE---SDDVFTIVAVSPDGKHIASGHCNGR 1042
Query: 330 ARIHGLKSGKLLKEFRGHSS-------------YVNDAIFTN---------DGSRVVTAS 367
++ + +G LLK G+ S + +AIF D +++ S
Sbjct: 1043 IKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTS 1102
Query: 368 SDCTVKVWDLKSTDCLQTFKP 388
+D +K+WD + D LQ P
Sbjct: 1103 TDRAIKLWDAATGD-LQKRLP 1122
Score = 40 (19.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 481 VHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+ + G+ P L+ + D +KLW
Sbjct: 1081 IFNTQITGLVFSPDAKLILSTSTDRAIKLW 1110
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 197 (74.4 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 45/129 (34%), Positives = 69/129 (53%)
Query: 255 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSE-GVTSLV 313
A F HD V ++FS S +LA+G D ++K+W +C + + S G+TS+
Sbjct: 295 ASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIE 354
Query: 314 FSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373
F G+ +L+ S D +RI + +L GHS V A F D +R+V+ S D T+K
Sbjct: 355 FDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLK 414
Query: 374 VWDLKSTDC 382
+WDL+S C
Sbjct: 415 LWDLRSKVC 423
Score = 120 (47.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 61/268 (22%), Positives = 112/268 (41%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G+ + F G +L++ S D +W D Y+ T H VL +
Sbjct: 345 GSNAGITSIEFDSAGAYLLAASNDFASRIWTV-------D-DYRLRHTLTGHSGKVLSAK 396
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQC--LRRL----ERAHSEGVTSLVFSRDGSQILST 324
F D+ + SGS D +K+W +RS C ++ L A G+ ++ + I+ T
Sbjct: 397 FLLDNARIVSGSHDRTLKLWDLRSKVCEEMQSLCVLMTFAFLLGIKTVFAGSSCNDIVCT 456
Query: 325 S-------FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWD 376
FD R ++S +++E A+ N + + +++ S D +K+ D
Sbjct: 457 EQCVMSGHFDKKIRFWDIRSESVVREMELLGKIT--ALDLNPERTELLSCSRDDLLKIID 514
Query: 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT-LQGQVVKSFS 435
L++ Q+F P G D + V +F + ++ + S+Y+ + L G+V K S
Sbjct: 515 LRTNAIKQSFSAPGFKCGSDWT--RV-VFSPDGSYVAAGSADGSLYVWSVLTGKVEKVLS 571
Query: 436 SGKREGGDFVAACVSPKGEWIYCVGEDR 463
K+ A +P G ++ V D+
Sbjct: 572 --KQHSSSINAVAWAPSG--LHVVSVDK 595
Score = 115 (45.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 29/109 (26%), Positives = 55/109 (50%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
+P+ L+SCS D +++ D + +K+ + A D T + FS D +A+G
Sbjct: 495 NPERTELLSCSRDDLLKIIDLRTNAIKQS--FSAPGFKCGSDWTR--VVFSPDGSYVAAG 550
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
S DG + VW + +G+ + L + HS + ++ ++ G ++S S A
Sbjct: 551 SADGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKGSRA 599
Score = 53 (23.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 55 RWDAILPQVAQLKLPRNKLE-DLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPER 113
RW +A+ R++L+ +E+I+L+ +L E ++L TQ + K + P R
Sbjct: 12 RWKR---HIAEELRRRDRLQRQAFEEIILQYTKLLEKSDLHSVL--TQKLQAEKHDVPNR 66
Query: 114 Y 114
+
Sbjct: 67 H 67
Score = 53 (23.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 12 KIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRW-DAILPQVAQLKLP- 69
+I+LQ+ K L + Q + V + ++ + G W D+ L ++AQLK+
Sbjct: 34 EIILQYTKLLEKSDLHSVLTQKLQAEKHDVPNRHE-ISPGHDGAWNDSQLQEMAQLKMKH 92
Query: 70 RNKLEDLYEQ 79
+ +L +L+++
Sbjct: 93 QEELTELHKK 102
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 207 (77.9 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 44/162 (27%), Positives = 85/162 (52%)
Query: 227 FLVSCSFDGFIEVW--DYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 284
F VS S D ++VW D +S ++ + + HD+ + + +R+ ++ +GS+D
Sbjct: 461 FFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSED 520
Query: 285 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF 344
+WR+ + L + H + S+ FS +++ S D T +I + G LK F
Sbjct: 521 RTASIWRLPDLVHVVTL-KGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTF 579
Query: 345 RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
GH+S V A F DG++ V+ +D +K+W++ +++C+ T+
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATY 621
Score = 153 (58.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 51/197 (25%), Positives = 83/197 (42%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQ 254
++ D +++ TI+ G SPD + L S I VWD + K +
Sbjct: 43 NIVDSTDSSVKSTIE-GESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIR----- 96
Query: 255 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 314
++ H+ V+ + +LA+ D K+ VW + G C R H V+S++F
Sbjct: 97 ---SWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYF-RGHKGVVSSILF 152
Query: 315 SRDGSQ--ILSTSFDSTARIHGLKSG----KLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368
D ++ ++S S D+T R+ L + K L H S V + DG + +A
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGR 212
Query: 369 DCTVKVWDLKSTDCLQT 385
D V +WDL C T
Sbjct: 213 DKVVNLWDLHDYSCKAT 229
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/136 (29%), Positives = 66/136 (48%)
Query: 262 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRIR-----SGQCL----RRLERAHSEGVTS 311
H+ +L + F++ S SGS D +KVW + S + + R + AH + + S
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 312 LVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371
+ +R+ S + + S D TA I L + +GH + F+ V+TAS D T
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKT 564
Query: 372 VKVWDLKSTDCLQTFK 387
VK+W + CL+TF+
Sbjct: 565 VKIWAISDGSCLKTFE 580
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/148 (23%), Positives = 61/148 (41%)
Query: 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD 317
T H + +EFS + + + S D +K+W I G CL+ E H+ V F D
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFE-GHTSSVLRASFITD 594
Query: 318 GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW-D 376
G+Q +S D ++ + + + + + H V + T D + +W D
Sbjct: 595 GTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHD 654
Query: 377 LKSTDCLQTFKPPPP--LRGGDASVNSV 402
++D F+ LRG + N+V
Sbjct: 655 STASDKEDDFRKEEEAILRGQELE-NAV 681
Score = 44 (20.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 444 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG 488
F AA + P + CV D+ + +S +E V K ++G
Sbjct: 313 FTAAAMLPSDHGLLCVTADQQFFFYSVVEN-VEETELVLSKRLVG 356
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 199 (75.1 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 206 HTIK-F-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH- 262
H +K F G + ++ P G L SCS D +++W DLQ + E + +
Sbjct: 350 HPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKW 409
Query: 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL 322
T S MLAS S D +++W + G C L + H E V S+ FS DG +
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMK-HQEPVYSVAFSPDGKYLA 468
Query: 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
S SFD I +SG L+ ++G + + + G +V ++SD +V V DL
Sbjct: 469 SGSFDKYVHIWNTQSGSLVHSYQGTGG-IFEVCWNARGDKVGASASDGSVCVLDL 522
Score = 147 (56.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 39/140 (27%), Positives = 68/140 (48%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 353 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSP 411
Query: 317 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
G S I+ S SFDST R+ ++ G H V F+ DG + + S
Sbjct: 412 TGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGS 471
Query: 368 SDCTVKVWDLKSTDCLQTFK 387
D V +W+ +S + +++
Sbjct: 472 FDKYVHIWNTQSGSLVHSYQ 491
Score = 144 (55.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 64/274 (23%), Positives = 113/274 (41%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ-----------CLRRLERAH----S 306
H+ V ++ S++LASGS D ++W + C+R E H +
Sbjct: 178 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR--EGGHDVPSN 235
Query: 307 EGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 366
+ VTSL ++ DG+ + S+D ARI ++G L H + + G+ V++A
Sbjct: 236 KDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGPIFALKWNKKGNYVLSA 294
Query: 367 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426
D T +WD + + Q F P A + + +N C+ I++ L
Sbjct: 295 GVDKTTIIWDAHTGEAKQQF----PFHSAPA----LDVDWQNNMTFASCSTDMCIHVCRL 346
Query: 427 Q-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKD 485
VK+F E A P G + +D L +S + H ++ H K+
Sbjct: 347 GCDHPVKTFQGHTNEVN---AIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE 403
Query: 486 VIGV--------THHPHRNL-LATYGEDCTMKLW 510
+ + T +P+ ++ LA+ D T++LW
Sbjct: 404 IYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Score = 139 (54.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 55/265 (20%), Positives = 114/265 (43%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
++ DG L S+DGF +W +G L T H + +++++ + S
Sbjct: 243 WNSDGTLLAMGSYDGFARIWTE-NGNLAS--------TLGQHKGPIFALKWNKKGNYVLS 293
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
D +W +G+ ++ HS + + ++ S S D + L
Sbjct: 294 AGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNMTFASCSTDMCIHVCRLGCDHP 351
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
+K F+GH++ VN + G + + S D T+K+W +K C+ L+ +
Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD------LQAHSKEIY 405
Query: 401 SVHLFP-----KNPDH-IVVCNKT--SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPK 452
++ P NP+ I++ + + S++ + ++ Q V + + K + + A SP
Sbjct: 406 TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE-QGVCTHTLMKHQEPVYSVA-FSPD 463
Query: 453 GEWIYCVGEDRNLYCFSHQSGKLEH 477
G+++ D+ ++ ++ QSG L H
Sbjct: 464 GKYLASGSFDKYVHIWNTQSGSLVH 488
Score = 136 (52.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 167 ALKWQQHQGLLPPGTQFDLFRGTAAMKQD--VEDMYPTTLS-HTIKFGTKSHAECARFSP 223
A+KW G+L D+ +MKQD V D+ + +TIK+ A +P
Sbjct: 364 AIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS---NP 419
Query: 224 DGQF-LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282
+ L S SFD + +WD G T M H E V + FS D + LASGS
Sbjct: 420 NSSIMLASASFDSTVRLWDVEQGV--------CTHTLMKHQEPVYSVAFSPDGKYLASGS 471
Query: 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
D + +W +SG + + + G+ + ++ G ++ +++ D +
Sbjct: 472 FDKYVHIWNTQSGSLVHSYQG--TGGIFEVCWNARGDKVGASASDGS 516
Score = 48 (22.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPPS L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPSALISILQKGLQYVEAEISINKDGTVFD 74
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 197 (74.4 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TKS + F P ++++ +G I++WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTL-------IDK-FDEHDGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S D
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 206 (77.6 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 58/188 (30%), Positives = 95/188 (50%)
Query: 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKD-------LQYQADET 258
HT GT C+R FLV+ S D +++W L K + QA T
Sbjct: 420 HTHSVGTIC---CSRLKES--FLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTT 474
Query: 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
HD+ + + S + ++LA+GSQD K+W + Q L + H G+ ++ FS
Sbjct: 475 RRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLG-VFTGHRRGLWNVQFSPT- 532
Query: 319 SQILST-SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
Q+L+T S D T ++ L+ LK F GH + V F + GS+++++ SD +K+W +
Sbjct: 533 DQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTI 592
Query: 378 KSTDCLQT 385
KS +C++T
Sbjct: 593 KSNECVRT 600
Score = 159 (61.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 59/193 (30%), Positives = 87/193 (45%)
Query: 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE-MLASGSQ 283
G SC+ D I +W K+ K Q H +V I SR E L +GSQ
Sbjct: 388 GWLFASCAKDQSIRIW-----KMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQ 442
Query: 284 DGKIKVWRIR-----------SGQCLRRLE---RAHSEGVTSLVFSRDGSQILSTSFDST 329
D +K+W + SG L + + R H + + SL S + + + S D T
Sbjct: 443 DCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDKLLATGSQDRT 502
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP 389
A++ L +LL F GH + + F+ + TAS+D T+K+W L+ CL+TF+
Sbjct: 503 AKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFE-- 560
Query: 390 PPLRGGDASVNSV 402
G DASV V
Sbjct: 561 ----GHDASVLKV 569
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 58/211 (27%), Positives = 95/211 (45%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SPD + LV+ S + W + G + + ++A +H V + F S +LA+G
Sbjct: 75 SPDDEVLVTASRALLLAQWAWREGTVTR--LWKA-----IHTAPVASMAFDATSTLLATG 127
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV-FSRDGSQIL--STSFDSTARIHGLKSG 338
DG ++VW I S GV LV F D +++L S++ D++ R+ L+
Sbjct: 128 GCDGAVRVWDIVQHYGTHHFRG--SPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDR 185
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS 398
L H S V F+ G ++++ D VWDL+S QT + P +AS
Sbjct: 186 SCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQS---YQTTRTVPVFESVEAS 242
Query: 399 VNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ 429
V L P+ P + K+S ++ +T Q
Sbjct: 243 V----LLPEQPAPALGV-KSSGLHFLTAGDQ 268
Score = 150 (57.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 41/110 (37%), Positives = 63/110 (57%)
Query: 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF-SRDSEML 278
+FSP Q L + S DG I++W +D + +TF HD +VL + F SR S++L
Sbjct: 528 QFSPTDQVLATASADGTIKLWAL------QD--FSCLKTFEGHDASVLKVAFVSRGSQLL 579
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS 328
+SGS DG +K+W I+S +C+R L+ AH + V L S+ ++ DS
Sbjct: 580 SSGS-DGLLKLWTIKSNECVRTLD-AHEDKVWGLHCSQLDDHAITGGSDS 627
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
SP+ + L + S D ++W L Q Q F H + ++FS ++LA+
Sbjct: 488 SPNDKLLATGSQDRTAKLW-----ALP---QCQLLGVFTGHRRGLWNVQFSPTDQVLATA 539
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S DG IK+W ++ CL+ E H V + F GSQ+LS+ D ++ +KS + +
Sbjct: 540 SADGTIKLWALQDFSCLKTFE-GHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECV 598
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
+ H V + +T SD + +W
Sbjct: 599 RTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILW 632
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/167 (25%), Positives = 71/167 (42%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278
A+ G +L C + + D SG L + L+ Q D+ E + + S D E+L
Sbjct: 30 AQLDQTGHYLF-CVCGTKVNILDVASGALLRSLE-QEDQ------EDITSFDLSPDDEVL 81
Query: 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338
+ S+ + W R G R + H+ V S+ F + + + D R+ +
Sbjct: 82 VTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQH 141
Query: 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTASS--DCTVKVWDLKSTDCL 383
FRG V+ F D +R++ SS D +++VW L+ CL
Sbjct: 142 YGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCL 188
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 69/283 (24%), Positives = 116/283 (40%)
Query: 250 DLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI-RSGQ--CLRRLERAHS 306
+LQ A + H + VL ++ R + AS ++D I++W++ ++GQ C+ + H+
Sbjct: 363 ELQTLACQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQ-GSGHT 421
Query: 307 EGVTSLVFSRDGSQILST-SFDSTARIHGLK-----------SGKLLKEF----RGHSSY 350
V ++ SR L T S D T ++ L SG +L + R H
Sbjct: 422 HSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKD 481
Query: 351 VND-AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409
+N A+ ND + T S D T K+W L L F G + +V P +
Sbjct: 482 INSLAVSPND-KLLATGSQDRTAKLWALPQCQLLGVFT------GHRRGLWNVQFSPTD- 533
Query: 410 DHIVVCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCF 468
+ + +I + LQ +K+F + A VS +G + G D L +
Sbjct: 534 QVLATASADGTIKLWALQDFSCLKTFEG--HDASVLKVAFVS-RGSQLLSSGSDGLLKLW 590
Query: 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
+ +S + + HE V G+ + T G D + LWK
Sbjct: 591 TIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWK 633
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 195 (73.7 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 209 KF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF G +F+ +VS FD + VWD S ++ Q +TF+ +TV+
Sbjct: 97 KFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEP---VQIIDTFL---DTVM 150
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
+ ++ +E++ GS DG ++ + +R G R + + V + S DG+ +L+ D
Sbjct: 151 SVVLTK-TEIIG-GSVDGTVRTFDMRIG---REMSDNLGQPVNCISISNDGNCVLAGCLD 205
Query: 328 STARIHGLKSGKLLKEFRGH--SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
ST R+ +G+LL+ ++GH S+ D TN + V+ S D V WDL L
Sbjct: 206 STLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSK 265
Query: 386 FKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421
F R D V SV PK C TSS+
Sbjct: 266 F------RAHDLVVTSVSYHPKED-----CMLTSSV 290
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 44/183 (24%), Positives = 84/183 (45%)
Query: 201 PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM 260
PT +H +K G + ARF+ DG + ++C D I +W+ G L K T+
Sbjct: 7 PTKEAHILK-GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIK--------TYK 57
Query: 261 MHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQ 320
H V + + D+ S D ++ W + +G+ +R+ R H V ++ F+ S
Sbjct: 58 SHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKF-RGHDGEVNAVKFNDSSSV 116
Query: 321 ILSTSFDSTARI-----HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
++S FD + R+ H ++ +++ F V + T + ++ S D TV+ +
Sbjct: 117 VVSAGFDRSLRVWDCRSHSVEPVQIIDTFL---DTVMSVVLTK--TEIIGGSVDGTVRTF 171
Query: 376 DLK 378
D++
Sbjct: 172 DMR 174
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H+ VL F+ D + +D I++W G L + ++H V + + D ++
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRG-ILIKTYKSHGREVRDVHVTSDNAKF 75
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
S D + +G+++++FRGH VN F + S VV+A D +++VWD +S
Sbjct: 76 CSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 50/261 (19%), Positives = 108/261 (41%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+T+ H V + + D+ S D ++ W + +G+ +R+ R H V ++ F+
Sbjct: 54 KTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKF-RGHDGEVNAVKFND 112
Query: 317 DGSQILSTSFDSTARI-----HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371
S ++S FD + R+ H ++ +++ F V + T + ++ S D T
Sbjct: 113 SSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFL---DTVMSVVLTK--TEIIGGSVDGT 167
Query: 372 VKVWDLK-STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV 430
V+ +D++ + P N V L + + ++T+ + +G +
Sbjct: 168 VRTFDMRIGREMSDNLGQPVNCISISNDGNCV-LAGCLDSTLRLLDRTTGELLQVYKGHI 226
Query: 431 VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT 490
KSF + C++ + ED ++ + K+ + H+ V V+
Sbjct: 227 SKSFKTD---------CCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVS 277
Query: 491 HHPHRNLLATYGEDCTMKLWK 511
+HP + + T D T+++WK
Sbjct: 278 YHPKEDCMLTSSVDGTIRVWK 298
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 197 (74.4 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TKS + F P ++++ +G I++WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTL-------IDK-FDEHDGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S D
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 204 (76.9 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287
L S S+D I +W+ + +Q H V C++F D L SGS D I
Sbjct: 286 LASGSYDATIRLWNLAT--------FQQVALLEGHSSGVTCLQF--DQCKLISGSMDKTI 335
Query: 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347
++W R+ +C+ L H++ V L F D + ++S S D T ++ GK + RGH
Sbjct: 336 RIWNYRTSECISILH-GHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRIT-LRGH 391
Query: 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTF 386
+ VN D V++ S D T+K+W L++ CL TF
Sbjct: 392 TGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTF 430
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 57/175 (32%), Positives = 83/175 (47%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S C +F D L+S S D I +W+Y + + L H ++VLC+
Sbjct: 311 GHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISILHG--------HTDSVLCLT 360
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
F DS +L SGS D +K+W G+ R R H+ V S+ RD +LS S DST
Sbjct: 361 F--DSTLLVSGSADCTVKLWHFSGGK--RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTI 416
Query: 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQT 385
+I L++ L F H V + SR+ + S D T+K WD++ C+ T
Sbjct: 417 KIWSLETNTCLHTFSAHIGPVQSLALAD--SRLFSCSLDGTIKQWDIEKKKCVHT 469
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 55/176 (31%), Positives = 92/176 (52%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H + V+C++ R+ +LASGS D I++W + + Q + LE HS GVT L F D ++
Sbjct: 272 HSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLE-GHSSGVTCLQF--DQCKL 326
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
+S S D T RI ++ + + GH+ V T D + +V+ S+DCTVK+W
Sbjct: 327 ISGSMDKTIRIWNYRTSECISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWHFSGGK 384
Query: 382 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV-VKSFSS 436
+ LRG VNSV + ++ ++ + S+I I +L+ + +FS+
Sbjct: 385 RIT-------LRGHTGPVNSVRII-RDRGLVLSGSDDSTIKIWSLETNTCLHTFSA 432
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 73/252 (28%), Positives = 108/252 (42%)
Query: 200 YPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETF 259
Y T+ +I G C F D LVS S D +++W + GK T
Sbjct: 340 YRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRI---------TL 388
Query: 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS 319
H V + RD ++ SGS D IK+W + + CL AH V SL + D S
Sbjct: 389 RGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFS-AHIGPVQSLALA-D-S 445
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
++ S S D T + ++ K + GH V + D R+++ + D VKVW+ +
Sbjct: 446 RLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWE--IAADHLRLISGAHDGVVKVWE--A 501
Query: 380 TDCLQTFK----PPPPLRGGDASVNS--------VHLFPKNPDHIVVCNKTSSIYIMTLQ 427
+C+ T K P + GD V S + LF P+ V T S+ I +L
Sbjct: 502 CECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLWLFNNAPNESPV--STQSVPISSLN 559
Query: 428 GQVVKSFSSGKR 439
GQ +S SS +R
Sbjct: 560 GQ--RSNSSVQR 569
Score = 118 (46.6 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 293 RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVN 352
R G+C + + HS+GV L R+ + S S+D+T R+ L + + + GHSS V
Sbjct: 260 RHGRCRQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVT 317
Query: 353 DAIFTNDGSRVVTASSDCTVKVWDLKSTDCL 383
F D ++++ S D T+++W+ ++++C+
Sbjct: 318 CLQF--DQCKLISGSMDKTIRIWNYRTSECI 346
Score = 45 (20.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 470 HQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H SG ++ H V V R L+ + +D T+K+W
Sbjct: 379 HFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW 419
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 201 (75.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH-DETVLCI 269
G + ++ P G L SCS D +++W DLQ + E + + T
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 416
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST 329
S MLAS S D +++W + G C L + H E V S+ FS DG + S SFD
Sbjct: 417 SNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTK-HQEPVYSIAFSPDGKYLASGSFDKC 475
Query: 330 ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
I +SG L+ ++G + + + G +V ++SD +V V DL+
Sbjct: 476 VHIWNTQSGSLVHSYQGTGG-IFEVCWNARGDKVGASASDGSVCVLDLR 523
Score = 147 (56.8 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 39/140 (27%), Positives = 68/140 (48%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H V I++ +LAS S D +K+W ++ C+ L+ AHS+ + ++ +S
Sbjct: 353 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSP 411
Query: 317 DG-------SQIL--STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
G S I+ S SFDST R+ ++ G H V F+ DG + + S
Sbjct: 412 TGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGS 471
Query: 368 SDCTVKVWDLKSTDCLQTFK 387
D V +W+ +S + +++
Sbjct: 472 FDKCVHIWNTQSGSLVHSYQ 491
Score = 145 (56.1 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 62/290 (21%), Positives = 122/290 (42%)
Query: 246 KLKKDLQYQADETFMM--HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ------- 296
++ +D++ ++ ++ H+ V ++ S++LASGS D ++W +
Sbjct: 160 EIDRDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQL 219
Query: 297 ----CLRR--LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY 350
C+R + ++ VTSL ++ DG+ + S+D ARI ++G L H
Sbjct: 220 VLRHCIREGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGP 278
Query: 351 VNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPD 410
+ + G+ +++A D T +WD + + Q F P A + + +N
Sbjct: 279 IFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQF----PFHSAPA----LDVDWQNNT 330
Query: 411 HIVVCNKTSSIYIMTLQGQV-VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFS 469
C I++ L + VK+F E A P G + +D L +S
Sbjct: 331 TFASCGTDMCIHVCRLGCDLPVKTFQGHTNEVN---AIKWDPSGMLLASCSDDMTLKIWS 387
Query: 470 HQSGKLEHLMKVHEKDVIGV--------THHPHRNL-LATYGEDCTMKLW 510
+ H ++ H K++ + T +P+ ++ LA+ D T++LW
Sbjct: 388 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Score = 136 (52.9 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 54/265 (20%), Positives = 114/265 (43%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
++ DG L S+DGF +W +G L T H + +++++ + S
Sbjct: 243 WNSDGTLLAMGSYDGFARIWTE-NGNLAS--------TLGQHKGPIFALKWNKKGNYILS 293
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
D +W +G+ ++ HS + + ++ + S D + L
Sbjct: 294 AGVDKTTIIWDAHTGEAKQQFP-FHSAPALDVDW-QNNTTFASCGTDMCIHVCRLGCDLP 351
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVN 400
+K F+GH++ VN + G + + S D T+K+W +K C+ L+ +
Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD------LQAHSKEIY 405
Query: 401 SVHLFP-----KNPDH-IVVCNKT--SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPK 452
++ P NP+ I++ + + S++ + ++ Q V + + K + + A SP
Sbjct: 406 TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVE-QGVCTHTLTKHQEPVYSIA-FSPD 463
Query: 453 GEWIYCVGEDRNLYCFSHQSGKLEH 477
G+++ D+ ++ ++ QSG L H
Sbjct: 464 GKYLASGSFDKCVHIWNTQSGSLVH 488
Score = 133 (51.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 66/319 (20%), Positives = 128/319 (40%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLS----GKLKKDLQYQADETFMMH 262
T+ G +S ++P L S S D +W+ G + L++ E + H
Sbjct: 173 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGW--H 230
Query: 263 D----ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318
D + V ++++ D +LA GS DG ++W +G L + H + +L +++ G
Sbjct: 231 DVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQ-HKGPIFALKWNKKG 288
Query: 319 SQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
+ ILS D T I +G+ ++F HS+ D + N+ + + +D + V L
Sbjct: 289 NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN-TTFASCGTDMCIHVCRLG 347
Query: 379 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL-QGQVVKSFSSG 437
++TF+ G VN++ P + C+ ++ I ++ Q V +
Sbjct: 348 CDLPVKTFQ------GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAH 400
Query: 438 KRE-----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491
+E A +P + D + + + G H + H++ V +
Sbjct: 401 SKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAF 460
Query: 492 HPHRNLLATYGEDCTMKLW 510
P LA+ D + +W
Sbjct: 461 SPDGKYLASGSFDKCVHIW 479
Score = 45 (20.9 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 9/33 (27%), Positives = 22/33 (66%)
Query: 153 SVVPPSRLMALIGQALKWQQHQ-GLLPPGTQFD 184
++VPP+ L++++ + L++ + + + GT FD
Sbjct: 42 TLVPPAALISILQKGLQYVEAEISINEDGTVFD 74
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 197 (74.4 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 69/278 (24%), Positives = 126/278 (45%)
Query: 195 DVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQ 254
D+++ L H +K G S DGQ + S S D + +WD SG K L +
Sbjct: 68 DLQEDNTLKLRHKLK-GHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFG 126
Query: 255 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF 314
+ + ++FS ++ + SG DGKI ++ + +G+ + L+ + + S+ +
Sbjct: 127 PVDLWT--------VQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAY 178
Query: 315 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374
S DG I S + D I + +GK+++ GH+ V F+ + ++TAS D +K+
Sbjct: 179 SPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKL 238
Query: 375 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM-TLQGQVVKS 433
+D+ +D + T G AS F ++ H + +S+ I T + + + +
Sbjct: 239 YDVTHSDVVGTLS-------GHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHT 291
Query: 434 FSSGKREGGDFV-AACVSPKGEWIYCVGEDRNL---YC 467
F+ E D V SP + + ED++L YC
Sbjct: 292 FA----EHTDQVWGVRYSPGNDKVASASEDKSLNIYYC 325
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 64/287 (22%), Positives = 120/287 (41%)
Query: 227 FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 286
FLV+ D ++VWD L++D + H V+ + S D + +AS S D
Sbjct: 54 FLVTGGLDDLVKVWD-----LQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDST 108
Query: 287 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 346
+ +W RSG L + + ++ FS ++S D ++ +++GK +
Sbjct: 109 MCLWDARSGDKKHLLSFGPVD-LWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDA 167
Query: 347 HSS-YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP-PLRGGDASVNSVHL 404
+ Y ++ DG + + + D + ++D+ + +QT + P+R S NS L
Sbjct: 168 QNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLL 227
Query: 405 FPKNPD-HIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDR 463
+ D H+ + + T S + TL G E G A+ S I+ E +
Sbjct: 228 LTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERK 287
Query: 464 NLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
L+ F+ H V GV + P + +A+ ED ++ ++
Sbjct: 288 CLHTFAE-----------HTDQVWGVRYSPGNDKVASASEDKSLNIY 323
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 197 (74.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TKS + F P ++++ +G I++WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTL-------IDK-FDEHDGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S D
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 197 (74.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TKS + F P ++++ +G I++WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTL-------IDK-FDEHDGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S D
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 197 (74.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TKS + F P ++++ +G I++WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTL-------IDK-FDEHDGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S D
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 197 (74.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TKS + F P ++++ +G I++WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTL-------IDK-FDEHDGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S D
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 203 (76.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 42/118 (35%), Positives = 66/118 (55%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H V C++F +S +A+GS D +++W R G +R L H V +L FS +G +
Sbjct: 437 HLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVR-LFTGHRGPVLTLAFSPNGKYL 495
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
S D ++ L SG L K+ RGH+ ++ F+ D S V +AS D TV+VWD+++
Sbjct: 496 ASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRN 553
Score = 176 (67.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 63/218 (28%), Positives = 100/218 (45%)
Query: 294 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVND 353
SG ++ L R HS V F D S +LS S DST R LKS +RGH+ V D
Sbjct: 343 SGSEIKTL-RGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWD 401
Query: 354 AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 413
+ TAS D T ++W T L+ + G + V+ V P N ++I
Sbjct: 402 VDVSPCSLYFSTASHDRTARLWSFARTYPLRLYA------GHLSDVDCVKFHP-NSNYIA 454
Query: 414 VCNKTSSIYIM-TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472
+ ++ + T QG V+ F+ G R G + SP G+++ GED+ L + S
Sbjct: 455 TGSTDKTVRLWSTRQGASVRLFT-GHR--GPVLTLAFSPNGKYLASAGEDQRLKLWDLAS 511
Query: 473 GKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
G L ++ H + ++ +L+A+ D T+++W
Sbjct: 512 GGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVW 549
Score = 176 (67.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 67/252 (26%), Positives = 111/252 (44%)
Query: 262 HDETVL-CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA-HSEGVTSLVFSRDGS 319
H E +L E S DS +LA+G + +K+W +R+ R+L+ H V+ + + D
Sbjct: 278 HTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRA----RKLKAGPHKADVSKIRLACD-- 331
Query: 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
+L D SG +K RGHS V F D S +++ S D TV+ WDLKS
Sbjct: 332 -VLEEEADDEDA-----SGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKS 385
Query: 380 -TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 438
T+ + P+ D V+ L+ H ++T+ ++ + ++ ++ G
Sbjct: 386 FTNTVLYRGHAYPV--WDVDVSPCSLYFSTASH----DRTARLWSFA-RTYPLRLYA-GH 437
Query: 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 498
D V P +I D+ + +S + G L H V+ + P+ L
Sbjct: 438 LSDVDCVK--FHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYL 495
Query: 499 ATYGEDCTMKLW 510
A+ GED +KLW
Sbjct: 496 ASAGEDQRLKLW 507
Score = 165 (63.1 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE 270
G S +C +F P+ ++ + S D + +W G + F H VL +
Sbjct: 436 GHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVR--------LFTGHRGPVLTLA 487
Query: 271 FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTA 330
FS + + LAS +D ++K+W + SG + L R H++ ++SL FS+D S + S S D+T
Sbjct: 488 FSPNGKYLASAGEDQRLKLWDLASGGLFKDL-RGHTDTISSLSFSQDSSLVASASMDNTV 546
Query: 331 RIHGLKS 337
R+ +++
Sbjct: 547 RVWDIRN 553
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
FSP+G++L S D +++WD SG L KDL+ H +T+ + FS+DS ++AS
Sbjct: 488 FSPNGKYLASAGEDQRLKLWDLASGGLFKDLRG--------HTDTISSLSFSQDSSLVAS 539
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF 326
S D ++VW IR+ + SE + ++ S IL+ F
Sbjct: 540 ASMDNTVRVWDIRNAHGSAPTDGCSSELIGQ--YTGSTSNILNVQF 583
Score = 139 (54.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 43/159 (27%), Positives = 67/159 (42%)
Query: 221 FSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280
F D L+SCS D + WD S + Y+ H V ++ S S ++
Sbjct: 362 FLTDASGLLSCSEDSTVRYWDLKS--FTNTVLYRG------HAYPVWDVDVSPCSLYFST 413
Query: 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340
S D ++W LR L H V + F + + I + S D T R+ + G
Sbjct: 414 ASHDRTARLWSFARTYPLR-LYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGAS 472
Query: 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379
++ F GH V F+ +G + +A D +K+WDL S
Sbjct: 473 VRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLAS 511
Score = 56 (24.8 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 35/116 (30%), Positives = 52/116 (44%)
Query: 201 PTTLSHTIKFGTKSHAE----CARFSPDGQFLVSCSFDGF-IEVWDYLSGKLKKDLQYQA 255
P +L+ T+ F H E A S D + L++ FD +++W + KLK ++A
Sbjct: 265 PPSLT-TVCFYAFQHTEQLLNTAEVSADSR-LLAAGFDNSAVKLWSLRARKLKAG-PHKA 321
Query: 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTS 311
D + + VL E D E ASGS+ IK R SG R + G+ S
Sbjct: 322 DVSKIRLACDVL--EEEADDED-ASGSE---IKTLRGHSGPVYRTAFLTDASGLLS 371
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 204 (76.9 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 50/173 (28%), Positives = 87/173 (50%)
Query: 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH-DET 265
T K G + ++ P GQ L SCS D +++W + DLQ + E + + T
Sbjct: 529 TFK-GHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPT 587
Query: 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 325
+ +LAS S D +++W + G C+ L + H+E V S+ FS DG + S S
Sbjct: 588 GPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTK-HTEPVYSVAFSPDGKHLASGS 646
Query: 326 FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378
FD I ++G+L+ ++G + + + + G++V ++SD +V V DL+
Sbjct: 647 FDKCVHIWSTQTGQLVHSYKGTGG-IFEVCWNSKGTKVGASASDGSVFVLDLR 698
Score = 151 (58.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR 316
+TF H V I++ ++LAS S D +K+W + +C L+ AHS+ + ++ +S
Sbjct: 528 KTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQ-AHSKEIYTIKWSP 586
Query: 317 DG--------SQIL-STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367
G + IL S SFDST R+ ++ G + H+ V F+ DG + + S
Sbjct: 587 TGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGS 646
Query: 368 SDCTVKVWDLKSTDCLQTFK 387
D V +W ++ + ++K
Sbjct: 647 FDKCVHIWSTQTGQLVHSYK 666
Score = 142 (55.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 68/336 (20%), Positives = 137/336 (40%)
Query: 190 AAMKQDVEDMY--PTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKL 247
A + D+++ P + + ++ G +S ++P L S S D +WD
Sbjct: 331 ALVPMDIDENIEIPESKARVLR-GHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANT 389
Query: 248 KKD---LQY--QADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE 302
+ L++ Q + ++ V ++++ D +LA+GS DG ++W+ G+ L
Sbjct: 390 NSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKT-DGRLASTLG 448
Query: 303 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIF-TNDGS 361
+ H + +L +++ G+ ILS D T I +G+ ++F HS+ D + TN
Sbjct: 449 Q-HKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQA- 506
Query: 362 RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421
+ S+D + V L + ++TFK G VN++ P+ + C+ ++
Sbjct: 507 -FASCSTDQRIHVCRLGVNEPIKTFK------GHTNEVNAIKWCPQG-QLLASCSDDMTL 558
Query: 422 YIMTL-QGQVVKSFSSGKRE-----GGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGK 474
I ++ + + + +E +P I D + + + G
Sbjct: 559 KIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGS 618
Query: 475 LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
H + H + V V P LA+ D + +W
Sbjct: 619 CIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIW 654
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 71/301 (23%), Positives = 127/301 (42%)
Query: 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE-- 276
A FS D L++ S+ G ++W +LK+ L+ A L D E
Sbjct: 267 AAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYV----GGVALRPGVKADEENV 322
Query: 277 -MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 335
+ASG DG +K+W + + + + V+ + F G + + +DS+ R+ L
Sbjct: 323 VAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDL 382
Query: 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPP-PPLRG 394
+ + GH+ V+ + +DGS +VT D +VWDL++ C+ + + G
Sbjct: 383 EQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFG 442
Query: 395 GDASVNSVHLFPKNPDH---IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSP 451
D S N H+ + D+ I + +Y + ++ ++E G F+ C
Sbjct: 443 VDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKY-QQECGSFLVTCS-- 499
Query: 452 KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
Y D +S+++ + ++ H+ VI V P+ +AT D T KLW
Sbjct: 500 -----Y----DSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550
Query: 512 P 512
P
Sbjct: 551 P 551
Score = 179 (68.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 48/167 (28%), Positives = 83/167 (49%)
Query: 213 KSHAE---CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269
+ HA+ C + DG LV+ D F VWD +G+ L+ H V +
Sbjct: 392 EGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEG--------HLGAVFGV 443
Query: 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD-GSQILSTSFDS 328
+FS + +A+GSQD K+W +R Q + + AH+ ++ + + ++ GS +++ S+DS
Sbjct: 444 DFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIP-AHTNLISDVKYQQECGSFLVTCSYDS 502
Query: 329 TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
T +I K+ + LK +GH + V + + T S D T K+W
Sbjct: 503 TTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 196 (74.1 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 57/170 (33%), Positives = 82/170 (48%)
Query: 209 KFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267
KF TKS + F P ++++ +G I++WDY L D+ F HD V
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTL-------IDK-FDEHDGPVR 55
Query: 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
I+F + + SG D KIKVW + +CL L H + + + F + ILS S D
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHEYPWILSASDD 114
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
T R+ +S + GH+ YV A F VV+AS D TV+VWD+
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDI 164
Score = 60 (26.2 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 468 FSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511
F ++H+++ H++ V HP L+ + +D +K+W+
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 233
Score = 54 (24.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVI 487
VVK G G ++ A P I +DR + + K + + H +V
Sbjct: 196 VVKHVLEGHDRGVNWAA--FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 253
Query: 488 GVTHHPHRNLLATYGEDCTMKLW 510
HP + L+ + ED ++++W
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVW 276
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 205 (77.2 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 58/211 (27%), Positives = 100/211 (47%)
Query: 187 RGTAAMKQDVE--DMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLS 244
R +AM D+E + HT G S + F ++ S D I++W S
Sbjct: 444 RDKSAMIWDLEKKESIAQLTGHT---GVISCVALPKKPSTSMFAITASDDRTIKLWKGFS 500
Query: 245 -----G---KLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ 296
G KKD + A T + H++ + I + + ++ A+ SQD +K+W + + +
Sbjct: 501 TTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLE 560
Query: 297 CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIF 356
+ + +AH GV + FS L+ S D T +I L LK GH V A F
Sbjct: 561 PITSI-KAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASF 619
Query: 357 TNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
+ G ++V+ +S+ +K+W++K+ +CL TF+
Sbjct: 620 ISFGMQIVSVASEGLIKLWNIKTNECLNTFE 650
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 39/154 (25%), Positives = 68/154 (44%)
Query: 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281
+P+ + + S D ++++W+ L+ +A + H +EFS + +
Sbjct: 536 APNDKIFATASQDSYVKLWNV--NNLEPITSIKAHRRGVWH------VEFSPIDQCFLTC 587
Query: 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341
S DG IK+W + CL+ LE H V F G QI+S + + ++ +K+ + L
Sbjct: 588 SADGTIKIWSLSDYTCLKTLE-GHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECL 646
Query: 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
F GH S + D R +T SD + W
Sbjct: 647 NTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 138 (53.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 48/208 (23%), Positives = 90/208 (43%)
Query: 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI 321
H+ + I+ ++AS S D +KVW + G C + H + VT L F ++
Sbjct: 128 HEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ--HDDVVTMLKFHPTLLKL 185
Query: 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381
++ D R++ L + + + H S ++ F+N G ++++ D + VWD+ S +
Sbjct: 186 VTVCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKN 244
Query: 382 CLQTFKPPPPLRGGDASV--NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKR 439
+T L GG ++ S + P+N I + + M +K+
Sbjct: 245 PKKTIPIYQEL-GGIITLPKESYNSLPEN-SKIKIEKIREKVKTMAAHADKIKNGDDITI 302
Query: 440 E-GGDFVA-ACVSPKGEWIYCVGEDRNL 465
GG+ V A + GE C+ D+N+
Sbjct: 303 VIGGEEVLRAWCTETGE---CIWNDQNI 327
Score = 126 (49.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 269 IEFSRDSEMLASGSQDG-KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD 327
+ S DS+ + S Q G +IK+ G + ++E +++ S + +IL +
Sbjct: 53 LRISEDSKFIVS--QAGYEIKIIDTEHGTVISKIES--DTKISTFALSPNNEEILIGCSN 108
Query: 328 STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK 387
+ + ++ L+K ++GH +N+ + G+ V +ASSD TVKVWDL+ C F+
Sbjct: 109 LQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ 168
Score = 94 (38.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 46/212 (21%), Positives = 89/212 (41%)
Query: 309 VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368
++S++ ++D +I+S + + I+ K+ + E G++ + D + ND + +V +S
Sbjct: 347 ISSIINNKD--KIISITSEHNLLIYNGKTLERQGEIIGYNDEIIDIKYINDDNIIVATNS 404
Query: 369 DCTVKVWDLKSTDCLQTFKPPPPL-RGGDASVNSVHLFPKNPDHIVVC---NKTSSIYIM 424
+ +K +DL +T Q + L D S + H+ + D + K SI +
Sbjct: 405 N-EIKTYDL-NTKRAQVLRGHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQL 462
Query: 425 TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH-----LM 479
T V+ + K+ A S G S K + +
Sbjct: 463 TGHTGVISCVALPKKPSTSMFAITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASVT 522
Query: 480 KV-HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
K+ HEKD+ ++ P+ + AT +D +KLW
Sbjct: 523 KIAHEKDINSISIAPNDKIFATASQDSYVKLW 554
Score = 84 (34.6 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 25/113 (22%), Positives = 49/113 (43%)
Query: 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 284
G + S S D ++VWD G + Q HD+ V ++F L + D
Sbjct: 141 GNIVASASSDKTVKVWDLEKGYCTHNFQ---------HDDVVTMLKFHPTLLKLVTVCLD 191
Query: 285 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337
I+V+ + + +C+ + H ++ + FS G +++S+ D + + S
Sbjct: 192 LNIRVYDLVTKECV--ILTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLS 242
Score = 44 (20.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510
+K H + V V P T D T+K+W
Sbjct: 565 IKAHRRGVWHVEFSPIDQCFLTCSADGTIKIW 596
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 203 (76.5 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 54/190 (28%), Positives = 91/190 (47%)
Query: 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263
L H + G + E + S + +V+ S G I VWD + K+ + T + H
Sbjct: 53 LRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILR--------TLLGHK 104
Query: 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILS 323
+ ++F +ASGS D IK+W +R C+ + ++H++ V L FS DG + S
Sbjct: 105 ANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKY-KSHTQAVRCLRFSPDGKWLAS 163
Query: 324 TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA-SSDCTVKVWDLKS--- 379
+ D T ++ L +GK++ EF GH VN F ++ + SS T++ WDL+
Sbjct: 164 AADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHV 223
Query: 380 TDCLQTFKPP 389
C++ P
Sbjct: 224 VSCIEEEATP 233
Score = 168 (64.2 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 284
G+ L + D + VW +L+ DL H + ++ S E++ +GSQ
Sbjct: 33 GRLLATGGDDCRVNVWSV--AQLRHDL-------LTGHTTPIESLQISAKEELIVAGSQS 83
Query: 285 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF 344
G I+VW + + + LR L H + SL F GS + S S D+ ++ ++ + ++
Sbjct: 84 GSIRVWDLEAAKILRTL-LGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKY 142
Query: 345 RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDL 377
+ H+ V F+ DG + +A+ D TVK+WDL
Sbjct: 143 KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDL 175
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 33/132 (25%), Positives = 62/132 (46%)
Query: 257 ETFMMHDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS 315
+ + H V + + + +LA+G D ++ VW + Q L H+ + SL S
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSV--AQLRHDLLTGHTTPIESLQIS 71
Query: 316 RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375
I++ S + R+ L++ K+L+ GH + + F GS V + S D +K+W
Sbjct: 72 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 131
Query: 376 DLKSTDCLQTFK 387
D++ C+ +K
Sbjct: 132 DVRRKGCIFKYK 143
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 49/213 (23%), Positives = 92/213 (43%)
Query: 304 AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF-RGHSSYVNDAIFTNDGSR 362
AHS V+SLV + ++L+T D R++ +L + GH++ + +
Sbjct: 18 AHSSNVSSLVLGKSTGRLLATGGDD-CRVNVWSVAQLRHDLLTGHTTPIESLQISAKEEL 76
Query: 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422
+V S +++VWDL++ L+T L G A++ S+ P + + + I
Sbjct: 77 IVAGSQSGSIRVWDLEAAKILRT------LLGHKANICSLDFHPYG-SFVASGSLDTDIK 129
Query: 423 IMTLQ--GQVVKSFSSGKREGGDFVAACV--SPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478
+ ++ G + K + S + C+ SP G+W+ +D + + +GK+
Sbjct: 130 LWDVRRKGCIFK-YKSHTQ-----AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE 183
Query: 479 MKVHEKDVIGVTHHPH-RNLLATYGEDCTMKLW 510
H V V HP LLA+ T++ W
Sbjct: 184 FTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFW 216
WARNING: HSPs involving 1143 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 512 500 0.00084 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1393
No. of states in DFA: 622 (66 KB)
Total size of DFA: 319 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.37u 0.10s 44.47t Elapsed: 00:00:04
Total cpu time: 44.54u 0.10s 44.64t Elapsed: 00:00:04
Start: Thu May 9 22:35:16 2013 End: Thu May 9 22:35:20 2013
WARNINGS ISSUED: 2