Query 010362
Match_columns 512
No_of_seqs 964 out of 2754
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 05:09:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010362.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010362hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.5E-56 8.7E-61 432.0 42.4 285 210-512 105-409 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 7.1E-48 2.4E-52 363.6 45.5 290 204-511 47-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 2.5E-47 8.6E-52 356.2 42.0 286 210-512 29-319 (321)
4 2pbi_B Guanine nucleotide-bind 100.0 5.3E-47 1.8E-51 359.3 44.5 292 203-511 55-354 (354)
5 2ynn_A Coatomer subunit beta'; 100.0 1.9E-45 6.5E-50 341.3 42.5 287 205-510 6-298 (304)
6 4ery_A WD repeat-containing pr 100.0 5.4E-45 1.9E-49 340.0 44.8 288 210-512 20-310 (312)
7 4g56_B MGC81050 protein; prote 100.0 5.1E-46 1.7E-50 352.8 37.1 290 210-512 39-341 (357)
8 4gqb_B Methylosome protein 50; 100.0 1.8E-45 6E-50 346.2 37.7 291 211-511 28-328 (344)
9 3iz6_a 40S ribosomal protein R 100.0 6.6E-46 2.2E-50 355.6 33.6 294 202-512 56-373 (380)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-44 4.9E-49 341.5 41.3 293 204-512 7-333 (345)
11 3frx_A Guanine nucleotide-bind 100.0 7.7E-44 2.6E-48 332.7 43.2 289 206-512 11-315 (319)
12 1nr0_A Actin interacting prote 100.0 1.2E-43 4.2E-48 361.0 44.1 300 202-512 137-565 (611)
13 1erj_A Transcriptional repress 100.0 9.8E-44 3.4E-48 342.1 39.8 295 211-512 62-387 (393)
14 2hes_X YDR267CP; beta-propelle 100.0 2.7E-43 9.4E-48 330.6 41.8 292 204-512 6-326 (330)
15 2xzm_R RACK1; ribosome, transl 100.0 6.2E-43 2.1E-47 330.3 42.0 291 205-512 14-338 (343)
16 1nr0_A Actin interacting prote 100.0 1.7E-42 5.9E-47 352.6 41.8 307 193-512 40-353 (611)
17 2ymu_A WD-40 repeat protein; u 100.0 7.9E-42 2.7E-46 346.6 43.7 293 193-511 285-577 (577)
18 1gxr_A ESG1, transducin-like e 100.0 4.7E-41 1.6E-45 316.8 44.3 285 210-511 48-334 (337)
19 2ynn_A Coatomer subunit beta'; 100.0 1.1E-41 3.9E-46 315.8 35.9 249 255-512 5-257 (304)
20 3zwl_B Eukaryotic translation 100.0 8.8E-41 3E-45 319.0 42.8 282 210-512 29-344 (369)
21 4aow_A Guanine nucleotide-bind 100.0 1.3E-40 4.5E-45 314.2 43.2 292 204-512 30-335 (340)
22 3dm0_A Maltose-binding peripla 100.0 1.8E-40 6.3E-45 343.2 42.6 289 207-512 377-691 (694)
23 3k26_A Polycomb protein EED; W 100.0 1.4E-41 4.9E-46 324.1 30.7 301 205-512 10-364 (366)
24 3ei3_B DNA damage-binding prot 100.0 9.8E-41 3.3E-45 320.6 36.1 290 204-512 65-380 (383)
25 2ymu_A WD-40 repeat protein; u 100.0 1.1E-39 3.8E-44 330.8 44.5 295 192-512 243-537 (577)
26 1sq9_A Antiviral protein SKI8; 100.0 2.4E-40 8.1E-45 319.6 36.0 293 210-512 13-393 (397)
27 2pm9_A Protein WEB1, protein t 100.0 1.9E-41 6.5E-46 329.4 28.2 293 211-512 10-335 (416)
28 3i2n_A WD repeat-containing pr 100.0 2.4E-40 8.2E-45 314.6 35.1 294 204-512 9-351 (357)
29 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-39 4.6E-44 311.3 39.2 284 211-511 6-358 (372)
30 1r5m_A SIR4-interacting protei 100.0 7.4E-40 2.5E-44 318.8 38.0 279 212-512 107-423 (425)
31 1vyh_C Platelet-activating fac 100.0 7.4E-40 2.5E-44 316.6 36.8 244 258-512 103-367 (410)
32 3gre_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 322.3 34.5 303 200-511 50-437 (437)
33 4e54_B DNA damage-binding prot 100.0 2.3E-40 7.9E-45 323.2 31.9 290 211-512 117-428 (435)
34 4gqb_B Methylosome protein 50; 100.0 2.7E-39 9.1E-44 304.1 36.9 251 210-475 79-334 (344)
35 4gga_A P55CDC, cell division c 100.0 9.3E-39 3.2E-43 310.4 41.7 281 215-512 107-393 (420)
36 3ow8_A WD repeat-containing pr 100.0 4.1E-39 1.4E-43 300.6 37.3 268 184-471 50-320 (321)
37 4ggc_A P55CDC, cell division c 100.0 2.3E-38 7.8E-43 295.9 42.0 281 216-512 28-313 (318)
38 4h5i_A Guanine nucleotide-exch 100.0 7.5E-40 2.6E-44 311.2 31.8 291 212-511 13-340 (365)
39 4aez_A CDC20, WD repeat-contai 100.0 4.1E-39 1.4E-43 311.0 37.0 280 211-512 89-378 (401)
40 2pm9_A Protein WEB1, protein t 100.0 2.5E-40 8.6E-45 321.4 28.6 312 189-512 42-412 (416)
41 3odt_A Protein DOA1; ubiquitin 100.0 2.5E-38 8.5E-43 294.9 40.2 281 203-512 9-294 (313)
42 1got_B GT-beta; complex (GTP-b 100.0 1.4E-38 4.8E-43 300.0 38.0 270 185-469 70-340 (340)
43 2pm7_B Protein transport prote 100.0 8.2E-39 2.8E-43 295.6 35.4 249 210-512 6-283 (297)
44 1r5m_A SIR4-interacting protei 100.0 1.2E-38 4.1E-43 310.3 38.1 288 211-512 43-359 (425)
45 3vl1_A 26S proteasome regulato 100.0 1.7E-39 5.9E-44 316.0 31.8 306 188-512 74-417 (420)
46 4a11_B DNA excision repair pro 100.0 2.3E-38 7.9E-43 306.6 39.2 300 210-512 40-363 (408)
47 3dwl_C Actin-related protein 2 100.0 3.1E-40 1E-44 316.5 25.3 290 211-512 9-377 (377)
48 3vl1_A 26S proteasome regulato 100.0 8.3E-39 2.9E-43 311.2 33.4 279 216-511 59-362 (420)
49 3frx_A Guanine nucleotide-bind 100.0 6.6E-38 2.3E-42 292.5 37.0 269 185-473 33-318 (319)
50 1pgu_A Actin interacting prote 100.0 1.5E-37 5.1E-42 317.6 42.5 316 192-512 39-570 (615)
51 2pbi_B Guanine nucleotide-bind 100.0 1.3E-37 4.5E-42 294.7 38.7 274 184-469 78-354 (354)
52 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-39 3.6E-44 321.9 23.7 309 191-512 182-515 (524)
53 3sfz_A APAF-1, apoptotic pepti 100.0 8.2E-38 2.8E-42 344.7 41.1 290 209-511 611-910 (1249)
54 1gxr_A ESG1, transducin-like e 100.0 4.7E-38 1.6E-42 296.2 33.6 281 211-512 7-294 (337)
55 3mkq_A Coatomer beta'-subunit; 100.0 8.2E-38 2.8E-42 330.1 38.7 287 205-511 6-299 (814)
56 4g56_B MGC81050 protein; prote 100.0 9.4E-39 3.2E-43 302.8 28.3 276 217-512 9-299 (357)
57 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.1E-37 1.4E-41 301.4 40.7 297 186-511 133-439 (445)
58 3bg1_A Protein SEC13 homolog; 100.0 5.4E-39 1.8E-43 299.5 25.9 267 207-512 7-291 (316)
59 3dw8_B Serine/threonine-protei 100.0 6.1E-38 2.1E-42 307.6 34.2 297 211-511 26-443 (447)
60 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-37 5.3E-42 293.4 34.5 251 257-511 9-280 (345)
61 2hes_X YDR267CP; beta-propelle 100.0 2.6E-37 9E-42 289.9 34.7 279 185-472 27-328 (330)
62 3iz6_a 40S ribosomal protein R 100.0 6.1E-38 2.1E-42 300.3 31.0 287 185-474 81-377 (380)
63 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-37 4.7E-42 343.0 37.8 308 188-512 633-1032(1249)
64 1yfq_A Cell cycle arrest prote 100.0 7.1E-38 2.4E-42 295.8 30.5 279 210-506 8-315 (342)
65 3v7d_B Cell division control p 100.0 1.4E-36 4.9E-41 299.4 39.9 299 185-510 135-459 (464)
66 4ery_A WD repeat-containing pr 100.0 8.2E-37 2.8E-41 284.6 35.6 247 256-512 16-266 (312)
67 3mmy_A MRNA export factor; mRN 100.0 2.5E-37 8.6E-42 294.9 32.7 297 198-511 25-343 (368)
68 3f3f_A Nucleoporin SEH1; struc 100.0 4.5E-37 1.5E-41 290.7 32.6 294 208-512 6-335 (351)
69 1pgu_A Actin interacting prote 100.0 4.1E-36 1.4E-40 306.9 40.6 312 184-512 175-612 (615)
70 2oaj_A Protein SNI1; WD40 repe 100.0 3.6E-37 1.2E-41 324.6 32.9 322 185-512 72-603 (902)
71 3v7d_B Cell division control p 100.0 1.5E-35 5E-40 292.2 41.7 277 207-512 116-419 (464)
72 1erj_A Transcriptional repress 100.0 3.4E-36 1.1E-40 289.6 36.1 243 261-512 62-339 (393)
73 1p22_A F-BOX/WD-repeat protein 100.0 3E-36 1E-40 294.3 35.3 269 211-512 131-412 (435)
74 2oaj_A Protein SNI1; WD40 repe 100.0 1.6E-36 5.5E-41 319.6 35.2 208 207-428 11-242 (902)
75 2xzm_R RACK1; ribosome, transl 100.0 1.3E-35 4.5E-40 280.1 38.0 248 255-512 13-283 (343)
76 3jrp_A Fusion protein of prote 100.0 4E-36 1.4E-40 287.9 32.9 247 211-511 9-284 (379)
77 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.1E-35 2.1E-39 286.0 40.8 269 211-512 116-389 (445)
78 4aez_A CDC20, WD repeat-contai 100.0 2.1E-35 7.3E-40 285.0 35.0 275 187-480 108-388 (401)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-36 5E-41 293.4 26.9 282 215-511 36-339 (402)
80 3dm0_A Maltose-binding peripla 100.0 1.2E-34 4.2E-39 299.7 38.5 270 184-471 397-692 (694)
81 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-34 4E-39 284.2 35.8 290 213-511 4-388 (450)
82 3mkq_A Coatomer beta'-subunit; 100.0 1.3E-34 4.6E-39 305.6 38.3 302 188-511 31-383 (814)
83 2j04_B YDR362CP, TAU91; beta p 100.0 1.9E-36 6.6E-41 298.7 22.0 247 211-512 131-426 (524)
84 4aow_A Guanine nucleotide-bind 100.0 5.3E-34 1.8E-38 268.9 37.2 272 185-474 54-339 (340)
85 1k8k_C P40, ARP2/3 complex 41 100.0 4.3E-34 1.5E-38 273.1 33.5 272 188-474 26-363 (372)
86 3dwl_C Actin-related protein 2 100.0 1.1E-35 3.6E-40 284.9 22.1 243 260-510 8-278 (377)
87 2j04_A TAU60, YPL007P, hypothe 100.0 9.9E-36 3.4E-40 285.9 21.5 264 211-511 13-294 (588)
88 3k26_A Polycomb protein EED; W 100.0 1.4E-34 4.8E-39 275.7 28.9 271 190-471 42-365 (366)
89 1sq9_A Antiviral protein SKI8; 100.0 2.8E-34 9.5E-39 277.0 30.7 284 185-474 29-397 (397)
90 2xyi_A Probable histone-bindin 100.0 6.2E-34 2.1E-38 277.2 32.9 245 258-512 123-408 (430)
91 3i2n_A WD repeat-containing pr 100.0 6.9E-35 2.4E-39 276.9 25.3 274 191-475 43-356 (357)
92 3zwl_B Eukaryotic translation 100.0 1.8E-33 6E-38 268.4 34.7 272 186-479 48-353 (369)
93 4e54_B DNA damage-binding prot 100.0 1.4E-34 4.7E-39 282.3 27.0 282 184-476 134-434 (435)
94 3ei3_B DNA damage-binding prot 100.0 1.2E-33 4.2E-38 271.2 32.8 275 184-472 88-382 (383)
95 3bws_A Protein LP49; two-domai 100.0 7.8E-33 2.7E-37 270.2 38.2 284 212-512 121-430 (433)
96 3jro_A Fusion protein of prote 100.0 2E-34 6.8E-39 299.7 28.5 249 210-512 6-283 (753)
97 4a11_B DNA excision repair pro 100.0 3.2E-33 1.1E-37 270.4 35.1 310 185-512 59-403 (408)
98 2aq5_A Coronin-1A; WD40 repeat 100.0 5.5E-34 1.9E-38 275.3 28.4 278 188-475 53-345 (402)
99 4gga_A P55CDC, cell division c 100.0 5.2E-33 1.8E-37 270.0 34.9 276 191-487 124-410 (420)
100 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-32 5.1E-37 255.7 34.5 240 256-512 11-253 (313)
101 1yfq_A Cell cycle arrest prote 100.0 1.4E-33 4.8E-38 266.3 27.5 238 260-512 8-280 (342)
102 3lrv_A PRE-mRNA-splicing facto 100.0 9E-34 3.1E-38 267.6 25.9 267 220-510 43-329 (343)
103 3vu4_A KMHSV2; beta-propeller 100.0 1.6E-32 5.4E-37 259.9 33.4 278 211-511 17-333 (355)
104 3dw8_B Serine/threonine-protei 100.0 2.7E-33 9.4E-38 274.5 28.2 248 262-512 27-371 (447)
105 2xyi_A Probable histone-bindin 100.0 1.3E-32 4.5E-37 267.8 31.7 260 207-473 122-411 (430)
106 4gq1_A NUP37; propeller, trans 100.0 3.3E-33 1.1E-37 268.4 25.5 238 269-506 95-382 (393)
107 2j04_A TAU60, YPL007P, hypothe 100.0 7.2E-34 2.5E-38 273.0 18.8 262 196-503 68-350 (588)
108 1l0q_A Surface layer protein; 100.0 4.2E-31 1.4E-35 254.2 37.8 264 226-512 3-273 (391)
109 2pm7_B Protein transport prote 100.0 3.2E-32 1.1E-36 251.4 27.5 218 258-512 4-236 (297)
110 3gre_A Serine/threonine-protei 100.0 1.2E-32 4.3E-37 269.0 26.2 283 185-469 79-437 (437)
111 3mmy_A MRNA export factor; mRN 100.0 1.2E-31 4.1E-36 255.5 31.4 244 258-512 34-302 (368)
112 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-31 4.3E-36 261.5 30.3 274 186-492 147-433 (435)
113 1l0q_A Surface layer protein; 100.0 4E-30 1.4E-34 247.4 39.1 300 187-512 7-340 (391)
114 2w18_A PALB2, fancn, partner a 100.0 1.3E-30 4.4E-35 235.3 31.3 282 215-512 41-355 (356)
115 4ggc_A P55CDC, cell division c 100.0 3.4E-30 1.1E-34 240.4 35.2 264 191-474 44-317 (318)
116 4h5i_A Guanine nucleotide-exch 100.0 8E-32 2.7E-36 255.9 24.3 253 211-473 71-344 (365)
117 3bg1_A Protein SEC13 homolog; 100.0 1.3E-31 4.6E-36 249.4 23.6 223 258-512 8-245 (316)
118 3vu4_A KMHSV2; beta-propeller 100.0 7E-30 2.4E-34 241.8 30.5 231 259-512 15-269 (355)
119 3lrv_A PRE-mRNA-splicing facto 100.0 4.5E-30 1.5E-34 242.3 28.9 270 183-471 49-332 (343)
120 4gq1_A NUP37; propeller, trans 100.0 6.7E-31 2.3E-35 252.4 23.2 252 211-470 87-387 (393)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-29 3.8E-34 248.9 32.2 243 263-511 4-336 (450)
122 3f3f_A Nucleoporin SEH1; struc 100.0 7.2E-30 2.4E-34 241.2 28.5 284 185-479 26-344 (351)
123 3jrp_A Fusion protein of prote 100.0 1.1E-29 3.7E-34 243.1 27.4 219 257-512 5-238 (379)
124 3bws_A Protein LP49; two-domai 100.0 4.6E-28 1.6E-32 236.3 35.2 283 211-512 58-388 (433)
125 1nir_A Nitrite reductase; hemo 100.0 4.9E-27 1.7E-31 233.6 35.5 309 186-512 153-512 (543)
126 3jro_A Fusion protein of prote 100.0 1.3E-28 4.4E-33 256.0 24.9 218 258-512 4-236 (753)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.1E-27 3.9E-32 231.2 26.7 278 214-512 63-385 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 5.7E-27 1.9E-31 226.3 30.9 277 193-495 94-409 (415)
129 2w18_A PALB2, fancn, partner a 100.0 2.3E-27 7.7E-32 214.2 25.2 191 273-470 143-355 (356)
130 1nir_A Nitrite reductase; hemo 100.0 2.1E-26 7.3E-31 229.0 29.8 274 220-512 144-456 (543)
131 3vgz_A Uncharacterized protein 100.0 3.2E-25 1.1E-29 209.9 36.0 277 211-504 38-334 (353)
132 2ecf_A Dipeptidyl peptidase IV 100.0 3.9E-26 1.3E-30 238.3 29.8 290 213-511 36-410 (741)
133 3u4y_A Uncharacterized protein 99.9 2.2E-25 7.7E-30 209.0 30.5 277 219-512 3-302 (331)
134 1ri6_A Putative isomerase YBHE 99.9 1.3E-25 4.5E-30 211.6 29.0 269 227-511 7-305 (343)
135 1pby_B Quinohemoprotein amine 99.9 4E-25 1.4E-29 207.7 29.6 266 226-512 2-308 (337)
136 2ojh_A Uncharacterized protein 99.9 3.2E-25 1.1E-29 204.1 26.1 254 230-505 17-293 (297)
137 1ri6_A Putative isomerase YBHE 99.9 3.7E-24 1.3E-28 201.6 33.6 294 191-495 14-334 (343)
138 1xfd_A DIP, dipeptidyl aminope 99.9 6.5E-26 2.2E-30 236.0 22.1 284 215-511 18-390 (723)
139 2z3z_A Dipeptidyl aminopeptida 99.9 5E-24 1.7E-28 221.0 31.3 279 214-512 82-433 (706)
140 2ecf_A Dipeptidyl peptidase IV 99.9 3.3E-24 1.1E-28 223.7 29.0 276 215-511 110-456 (741)
141 3u4y_A Uncharacterized protein 99.9 4.3E-23 1.5E-27 193.4 33.4 294 182-495 10-326 (331)
142 1jmx_B Amine dehydrogenase; ox 99.9 5.6E-24 1.9E-28 200.9 27.5 270 218-512 4-323 (349)
143 1xfd_A DIP, dipeptidyl aminope 99.9 8.9E-24 3.1E-28 219.8 27.6 293 192-501 37-427 (723)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 6.4E-23 2.2E-27 198.5 31.5 255 213-470 36-331 (434)
145 3hfq_A Uncharacterized protein 99.9 1.5E-22 5.1E-27 191.1 33.2 265 234-510 15-313 (347)
146 1k32_A Tricorn protease; prote 99.9 3.6E-23 1.2E-27 223.2 32.5 297 196-512 84-459 (1045)
147 3o4h_A Acylamino-acid-releasin 99.9 4.4E-23 1.5E-27 208.8 26.8 267 212-511 20-312 (582)
148 2z3z_A Dipeptidyl aminopeptida 99.9 7.2E-23 2.5E-27 212.3 28.7 282 216-511 28-388 (706)
149 1k32_A Tricorn protease; prote 99.9 6E-23 2E-27 221.5 28.8 279 206-511 197-499 (1045)
150 2ojh_A Uncharacterized protein 99.9 8.4E-23 2.9E-27 187.9 24.7 250 193-463 23-293 (297)
151 1pby_B Quinohemoprotein amine 99.9 2.4E-22 8.2E-27 188.7 26.0 272 192-483 11-321 (337)
152 3hfq_A Uncharacterized protein 99.9 1.2E-21 4.1E-26 184.9 29.9 260 211-477 37-324 (347)
153 3vgz_A Uncharacterized protein 99.9 4.4E-21 1.5E-25 181.4 31.5 240 262-512 39-301 (353)
154 3scy_A Hypothetical bacterial 99.9 1.3E-20 4.5E-25 178.7 33.4 269 212-492 48-360 (361)
155 2oit_A Nucleoporin 214KDA; NH2 99.9 3.9E-21 1.3E-25 186.0 30.1 216 210-427 89-332 (434)
156 3pe7_A Oligogalacturonate lyas 99.9 4.2E-21 1.4E-25 184.1 29.5 285 211-511 28-379 (388)
157 1z68_A Fibroblast activation p 99.9 2E-22 6.7E-27 209.5 21.3 279 218-511 20-388 (719)
158 3scy_A Hypothetical bacterial 99.9 2.5E-20 8.6E-25 176.8 33.6 271 224-511 12-334 (361)
159 1z68_A Fibroblast activation p 99.9 1.2E-21 4.2E-26 203.5 23.1 303 192-511 36-440 (719)
160 1jof_A Carboxy-CIS,CIS-muconat 99.9 3.1E-20 1.1E-24 176.3 29.5 275 227-511 4-338 (365)
161 3o4h_A Acylamino-acid-releasin 99.9 1.3E-20 4.4E-25 190.7 20.7 233 262-512 20-274 (582)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 2E-19 6.8E-24 170.7 27.0 254 212-474 38-343 (365)
163 4a5s_A Dipeptidyl peptidase 4 99.9 6.9E-20 2.3E-24 190.4 24.2 277 215-502 18-381 (740)
164 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-18 3.6E-23 164.7 30.2 266 188-482 17-335 (349)
165 3fvz_A Peptidyl-glycine alpha- 99.8 8.3E-19 2.8E-23 163.8 28.1 247 263-512 23-320 (329)
166 2oiz_A Aromatic amine dehydrog 99.8 4.5E-19 1.5E-23 167.5 26.5 272 224-512 14-332 (361)
167 1q7f_A NHL, brain tumor CG1071 99.8 6.6E-18 2.2E-22 154.5 32.6 245 211-512 27-278 (286)
168 3c5m_A Oligogalacturonate lyas 99.8 2.3E-19 7.8E-24 172.4 21.9 274 216-510 38-378 (396)
169 3azo_A Aminopeptidase; POP fam 99.8 1.4E-18 4.7E-23 178.8 28.3 282 211-510 21-363 (662)
170 2oiz_A Aromatic amine dehydrog 99.8 9.7E-18 3.3E-22 158.3 29.2 289 193-496 32-360 (361)
171 3fvz_A Peptidyl-glycine alpha- 99.8 2.1E-17 7.2E-22 154.3 30.0 246 213-472 23-322 (329)
172 2dg1_A DRP35, lactonase; beta 99.8 6.5E-18 2.2E-22 158.2 26.1 270 214-504 6-300 (333)
173 4a5s_A Dipeptidyl peptidase 4 99.8 9.4E-18 3.2E-22 174.3 29.2 294 192-502 36-434 (740)
174 2gop_A Trilobed protease; beta 99.8 4.9E-17 1.7E-21 153.2 30.4 256 215-511 16-328 (347)
175 3pe7_A Oligogalacturonate lyas 99.8 5.3E-18 1.8E-22 162.4 21.8 234 269-512 41-327 (388)
176 3azo_A Aminopeptidase; POP fam 99.8 5.7E-17 1.9E-21 166.7 26.5 254 218-482 81-379 (662)
177 2z2n_A Virginiamycin B lyase; 99.8 9.2E-15 3.2E-19 134.3 38.7 278 211-511 12-292 (299)
178 2xdw_A Prolyl endopeptidase; a 99.8 1.3E-16 4.6E-21 164.9 28.0 241 262-512 123-412 (710)
179 1qks_A Cytochrome CD1 nitrite 99.8 7E-15 2.4E-19 145.8 38.2 304 191-512 176-536 (567)
180 3dsm_A Uncharacterized protein 99.8 5.1E-16 1.7E-20 144.6 28.3 260 233-512 15-300 (328)
181 3c5m_A Oligogalacturonate lyas 99.8 1.5E-17 5.2E-22 159.6 17.5 237 263-512 35-327 (396)
182 2xdw_A Prolyl endopeptidase; a 99.7 4.7E-16 1.6E-20 160.9 28.5 246 211-474 122-416 (710)
183 3no2_A Uncharacterized protein 99.7 2E-15 7E-20 136.3 28.9 245 224-489 4-271 (276)
184 3no2_A Uncharacterized protein 99.7 1.8E-15 6.3E-20 136.6 28.3 220 274-502 4-231 (276)
185 2bkl_A Prolyl endopeptidase; m 99.7 6.2E-17 2.1E-21 166.9 20.7 275 223-512 77-395 (695)
186 3e5z_A Putative gluconolactona 99.7 2.2E-15 7.4E-20 138.4 28.9 231 259-508 23-281 (296)
187 3e5z_A Putative gluconolactona 99.7 4.2E-15 1.5E-19 136.5 30.3 240 211-476 25-290 (296)
188 2mad_H Methylamine dehydrogena 99.7 2E-14 6.9E-19 135.6 35.4 274 221-512 28-348 (373)
189 1qks_A Cytochrome CD1 nitrite 99.7 6.9E-15 2.4E-19 145.8 33.4 272 223-511 165-474 (567)
190 1rwi_B Serine/threonine-protei 99.7 3.7E-15 1.3E-19 134.9 27.4 236 265-512 25-262 (270)
191 2dg1_A DRP35, lactonase; beta 99.7 1.1E-14 3.8E-19 136.2 31.4 254 206-471 38-315 (333)
192 2qc5_A Streptogramin B lactona 99.7 9.5E-14 3.2E-18 127.6 37.2 279 212-512 18-298 (300)
193 2bkl_A Prolyl endopeptidase; m 99.7 2.4E-16 8.1E-21 162.6 21.6 247 211-475 118-400 (695)
194 2gop_A Trilobed protease; beta 99.7 4.3E-15 1.5E-19 139.8 28.5 234 214-484 59-341 (347)
195 1rwi_B Serine/threonine-protei 99.7 6E-15 2.1E-19 133.5 27.4 241 215-474 25-266 (270)
196 3sjl_D Methylamine dehydrogena 99.7 6.7E-15 2.3E-19 136.7 27.7 276 220-512 39-361 (386)
197 3dsm_A Uncharacterized protein 99.7 6.9E-15 2.4E-19 136.9 28.1 255 214-491 44-319 (328)
198 2z2n_A Virginiamycin B lyase; 99.7 5.2E-13 1.8E-17 122.5 35.5 238 262-512 13-253 (299)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 5.7E-14 1.9E-18 130.1 28.6 241 262-512 16-297 (314)
200 1yr2_A Prolyl oligopeptidase; 99.7 1.5E-14 5E-19 150.3 26.7 275 223-512 116-439 (741)
201 3c75_H MADH, methylamine dehyd 99.7 4.1E-14 1.4E-18 134.0 27.0 272 223-512 82-400 (426)
202 1yr2_A Prolyl oligopeptidase; 99.6 1.5E-14 5.3E-19 150.1 24.0 245 211-475 160-444 (741)
203 3hrp_A Uncharacterized protein 99.6 4.5E-13 1.5E-17 128.2 31.1 242 264-511 131-407 (409)
204 3sjl_D Methylamine dehydrogena 99.6 6.4E-13 2.2E-17 123.5 29.1 289 192-494 59-384 (386)
205 1q7f_A NHL, brain tumor CG1071 99.6 4.9E-13 1.7E-17 122.0 27.9 199 304-512 27-236 (286)
206 2mad_H Methylamine dehydrogena 99.6 1E-11 3.5E-16 117.1 36.5 270 194-479 49-357 (373)
207 2qc5_A Streptogramin B lactona 99.6 1E-11 3.5E-16 113.9 34.3 239 262-512 18-258 (300)
208 1xip_A Nucleoporin NUP159; bet 99.6 3.8E-14 1.3E-18 132.3 16.9 184 215-414 39-230 (388)
209 3g4e_A Regucalcin; six bladed 99.6 3E-12 1E-16 117.3 29.2 227 264-502 13-260 (297)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3.5E-12 1.2E-16 118.0 28.2 246 212-472 16-299 (314)
211 2qe8_A Uncharacterized protein 99.5 6.5E-13 2.2E-17 124.5 21.4 267 214-507 17-314 (343)
212 3hrp_A Uncharacterized protein 99.5 1.1E-11 3.9E-16 118.4 30.4 244 214-470 131-408 (409)
213 1xip_A Nucleoporin NUP159; bet 99.5 3E-13 1E-17 126.3 18.6 175 264-502 38-232 (388)
214 3c75_H MADH, methylamine dehyd 99.5 6.7E-12 2.3E-16 118.9 27.5 275 192-479 99-409 (426)
215 3iuj_A Prolyl endopeptidase; h 99.5 2.1E-12 7.1E-17 132.9 25.0 244 211-475 126-408 (693)
216 2ghs_A AGR_C_1268P; regucalcin 99.5 2.8E-11 9.5E-16 112.4 29.9 222 266-502 51-290 (326)
217 1mda_H Methylamine dehydrogena 99.5 2.6E-12 8.8E-17 119.8 21.2 251 236-512 47-344 (368)
218 3dr2_A Exported gluconolactona 99.5 1.9E-11 6.4E-16 112.5 26.5 230 262-510 43-303 (305)
219 3g4e_A Regucalcin; six bladed 99.5 7.5E-11 2.5E-15 108.0 29.4 227 214-461 13-261 (297)
220 3dr2_A Exported gluconolactona 99.5 1.7E-11 5.7E-16 112.8 25.1 229 211-464 42-299 (305)
221 3iuj_A Prolyl endopeptidase; h 99.5 1.5E-12 5.1E-17 133.9 19.9 235 262-512 127-403 (693)
222 2ghs_A AGR_C_1268P; regucalcin 99.4 2.6E-10 8.9E-15 105.8 31.1 226 215-462 50-292 (326)
223 2ece_A 462AA long hypothetical 99.4 1.7E-10 5.8E-15 107.8 25.7 228 270-502 88-399 (462)
224 2ece_A 462AA long hypothetical 99.4 4.3E-10 1.5E-14 105.1 28.3 235 223-460 93-399 (462)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.4 9.7E-10 3.3E-14 104.3 30.9 258 224-512 102-376 (376)
226 1yiq_A Quinohemoprotein alcoho 99.4 6.1E-11 2.1E-15 121.1 23.8 285 224-512 69-503 (689)
227 1kb0_A Quinohemoprotein alcoho 99.4 7.9E-11 2.7E-15 120.0 24.5 283 225-512 77-505 (677)
228 2hz6_A Endoplasmic reticulum t 99.4 1.9E-13 6.6E-18 129.1 4.3 147 224-385 8-155 (369)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.9E-09 6.6E-14 102.2 32.0 274 224-512 52-335 (376)
230 1fwx_A Nitrous oxide reductase 99.3 1.2E-10 4E-15 112.8 21.6 263 228-503 18-407 (595)
231 2iwa_A Glutamine cyclotransfer 99.3 4.3E-10 1.5E-14 98.9 23.3 214 202-428 9-237 (266)
232 1yiq_A Quinohemoprotein alcoho 99.3 5.8E-10 2E-14 113.9 27.3 267 224-501 120-536 (689)
233 1mda_H Methylamine dehydrogena 99.3 3.5E-11 1.2E-15 112.1 16.5 279 193-493 47-366 (368)
234 3hxj_A Pyrrolo-quinoline quino 99.3 4.9E-10 1.7E-14 104.2 23.4 262 214-511 60-321 (330)
235 1kb0_A Quinohemoprotein alcoho 99.3 5.7E-10 2E-14 113.7 25.3 267 224-500 127-536 (677)
236 1npe_A Nidogen, entactin; glyc 99.3 2.6E-08 8.9E-13 89.4 32.5 255 226-496 2-263 (267)
237 2qe8_A Uncharacterized protein 99.2 5.2E-10 1.8E-14 104.6 18.4 205 307-512 17-276 (343)
238 3hxj_A Pyrrolo-quinoline quino 99.2 4.9E-10 1.7E-14 104.2 16.9 258 219-512 25-282 (330)
239 2hz6_A Endoplasmic reticulum t 99.2 6E-12 2.1E-16 118.8 3.1 178 274-512 8-190 (369)
240 1fwx_A Nitrous oxide reductase 99.2 4E-09 1.4E-13 102.2 21.5 235 223-475 99-434 (595)
241 4a2l_A BT_4663, two-component 99.2 3.4E-07 1.2E-11 95.8 38.0 281 216-512 175-478 (795)
242 3nol_A Glutamine cyclotransfer 99.1 1.3E-08 4.4E-13 88.3 22.2 205 203-422 32-250 (262)
243 1kv9_A Type II quinohemoprotei 99.1 6.7E-09 2.3E-13 105.7 23.7 286 224-512 65-486 (668)
244 4a2l_A BT_4663, two-component 99.1 1.5E-06 5E-11 91.0 40.8 285 214-512 310-612 (795)
245 3mbr_X Glutamine cyclotransfer 99.1 3.9E-08 1.3E-12 84.5 23.4 204 203-422 10-229 (243)
246 1k3i_A Galactose oxidase precu 99.1 2.4E-08 8.3E-13 101.9 24.3 281 218-503 190-530 (656)
247 2iwa_A Glutamine cyclotransfer 99.1 9.4E-08 3.2E-12 84.0 24.4 202 265-473 22-238 (266)
248 2fp8_A Strictosidine synthase; 99.1 3.9E-08 1.3E-12 90.9 23.0 234 264-512 19-311 (322)
249 1kv9_A Type II quinohemoprotei 99.0 6.2E-08 2.1E-12 98.7 25.9 268 224-502 116-520 (668)
250 3qqz_A Putative uncharacterize 99.0 1.3E-07 4.6E-12 82.6 24.3 211 259-471 22-252 (255)
251 3nol_A Glutamine cyclotransfer 99.0 7.2E-08 2.5E-12 83.6 22.1 185 266-503 45-244 (262)
252 2ad6_A Methanol dehydrogenase 99.0 6.2E-08 2.1E-12 96.6 24.9 282 225-512 62-492 (571)
253 2xtc_A F-box-like/WD repeat-co 99.0 7E-10 2.4E-14 76.6 7.1 38 3-40 1-38 (90)
254 1npe_A Nidogen, entactin; glyc 99.0 5.3E-07 1.8E-11 80.7 28.1 225 276-512 2-236 (267)
255 3nok_A Glutaminyl cyclase; bet 99.0 2.5E-07 8.4E-12 80.2 23.8 205 203-422 44-260 (268)
256 2p4o_A Hypothetical protein; p 99.0 3E-07 1E-11 84.3 26.2 230 264-503 32-277 (306)
257 1w6s_A Methanol dehydrogenase 99.0 1.5E-07 5E-12 93.8 25.5 284 225-512 62-501 (599)
258 2fp8_A Strictosidine synthase; 99.0 2.1E-07 7.1E-12 86.0 24.0 246 214-472 19-313 (322)
259 2ad6_A Methanol dehydrogenase 98.9 3E-07 1E-11 91.6 25.6 266 224-500 114-523 (571)
260 1ijq_A LDL receptor, low-densi 98.9 4.4E-06 1.5E-10 76.7 31.5 235 228-479 4-245 (316)
261 2p4o_A Hypothetical protein; p 98.9 1.4E-06 4.6E-11 79.8 27.7 229 214-463 32-279 (306)
262 3v64_C Agrin; beta propeller, 98.9 3.3E-06 1.1E-10 78.7 30.0 246 214-480 34-283 (349)
263 3v9f_A Two-component system se 98.9 1.7E-05 5.9E-10 82.7 37.5 285 214-512 211-522 (781)
264 3p5b_L Low density lipoprotein 98.9 1E-05 3.5E-10 76.8 32.4 237 227-480 85-328 (400)
265 1flg_A Protein (quinoprotein e 98.9 3.9E-06 1.4E-10 83.6 30.7 271 225-501 117-547 (582)
266 3v9f_A Two-component system se 98.9 1.1E-05 3.6E-10 84.3 35.4 287 213-512 257-566 (781)
267 1flg_A Protein (quinoprotein e 98.9 1.1E-06 3.8E-11 87.6 26.6 284 225-512 68-514 (582)
268 1w6s_A Methanol dehydrogenase 98.9 8.3E-07 2.8E-11 88.4 24.9 271 219-501 111-534 (599)
269 3v65_B Low-density lipoprotein 98.9 4.9E-06 1.7E-10 78.6 29.3 254 216-490 79-336 (386)
270 3mbr_X Glutamine cyclotransfer 98.8 2E-06 7E-11 73.9 23.8 187 264-503 21-223 (243)
271 3nok_A Glutaminyl cyclase; bet 98.8 5.1E-07 1.7E-11 78.3 19.8 193 296-502 44-253 (268)
272 2xe4_A Oligopeptidase B; hydro 98.8 1.4E-06 4.8E-11 90.2 26.3 243 215-475 175-461 (751)
273 3v64_C Agrin; beta propeller, 98.8 1.9E-05 6.7E-10 73.4 30.8 235 264-511 34-272 (349)
274 3tc9_A Hypothetical hydrolase; 98.7 7.5E-06 2.6E-10 78.5 26.8 238 265-512 138-428 (430)
275 1ijq_A LDL receptor, low-densi 98.7 6.6E-05 2.2E-09 68.8 30.9 223 277-511 3-235 (316)
276 3v65_B Low-density lipoprotein 98.7 2.2E-05 7.6E-10 74.1 28.0 233 266-511 79-315 (386)
277 3sov_A LRP-6, low-density lipo 98.7 2.3E-05 7.7E-10 71.8 27.2 230 234-479 12-245 (318)
278 3tc9_A Hypothetical hydrolase; 98.7 1.8E-05 6.3E-10 75.8 27.3 245 215-471 138-429 (430)
279 4hw6_A Hypothetical protein, I 98.7 1.8E-05 6E-10 75.9 26.7 239 265-512 140-431 (433)
280 2xbg_A YCF48-like protein; pho 98.7 0.00025 8.5E-09 65.3 36.8 278 211-511 33-319 (327)
281 4hw6_A Hypothetical protein, I 98.6 3.2E-05 1.1E-09 74.1 27.7 244 215-471 140-432 (433)
282 3qqz_A Putative uncharacterize 98.6 8.7E-05 3E-09 64.8 27.7 205 304-511 24-250 (255)
283 3m0c_C LDL receptor, low-densi 98.5 0.00016 5.5E-09 74.3 30.5 229 234-479 403-639 (791)
284 2xe4_A Oligopeptidase B; hydro 98.5 2E-05 6.7E-10 81.6 23.8 195 265-470 175-398 (751)
285 1n7d_A LDL receptor, low-densi 98.5 1.5E-06 5.1E-11 88.7 14.7 241 234-491 385-633 (699)
286 1k3i_A Galactose oxidase precu 98.5 2.3E-05 7.9E-10 79.8 22.7 239 212-461 241-530 (656)
287 3p5b_L Low density lipoprotein 98.5 0.00031 1.1E-08 66.6 28.8 223 277-511 85-317 (400)
288 3sov_A LRP-6, low-density lipo 98.4 0.00016 5.5E-09 66.1 25.6 224 278-511 7-235 (318)
289 3kya_A Putative phosphatase; s 98.4 0.00028 9.7E-09 67.7 27.0 255 215-476 140-479 (496)
290 3kya_A Putative phosphatase; s 98.4 0.00023 7.9E-09 68.4 25.7 240 265-511 140-472 (496)
291 1bpo_A Protein (clathrin); cla 98.4 0.0017 5.7E-08 60.1 34.0 251 234-507 47-324 (494)
292 2xzh_A Clathrin heavy chain 1; 98.3 0.0016 5.4E-08 57.9 34.3 251 234-507 48-325 (365)
293 1uuj_A Platelet-activating fac 98.3 3E-07 1E-11 63.0 2.7 53 7-61 10-62 (88)
294 2p9w_A MAL S 1 allergenic prot 98.3 0.00035 1.2E-08 62.7 23.2 161 216-379 15-215 (334)
295 2ism_A Putative oxidoreductase 98.3 0.00081 2.8E-08 62.5 26.9 235 214-460 31-333 (352)
296 2p9w_A MAL S 1 allergenic prot 98.3 0.00013 4.5E-09 65.5 19.7 168 305-473 11-216 (334)
297 3a9g_A Putative uncharacterize 98.2 0.0025 8.7E-08 59.1 29.0 145 213-365 28-214 (354)
298 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0039 1.3E-07 62.6 32.1 232 227-478 8-243 (628)
299 3amr_A 3-phytase; beta-propell 98.2 0.00096 3.3E-08 60.5 24.5 193 274-480 39-272 (355)
300 3s94_A LRP-6, low-density lipo 98.2 0.0063 2.2E-07 61.0 32.9 288 214-511 84-420 (619)
301 3s94_A LRP-6, low-density lipo 98.2 0.0015 5E-08 65.6 27.9 228 234-478 17-249 (619)
302 3amr_A 3-phytase; beta-propell 98.2 0.00092 3.1E-08 60.6 23.1 187 317-511 39-260 (355)
303 2xbg_A YCF48-like protein; pho 98.2 0.003 1E-07 58.0 27.5 238 213-469 79-319 (327)
304 3m0c_C LDL receptor, low-densi 98.1 0.0033 1.1E-07 64.7 29.3 221 277-509 397-627 (791)
305 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0038 1.3E-07 62.7 29.3 223 277-511 8-234 (628)
306 2g8s_A Glucose/sorbosone dehyd 98.1 0.0062 2.1E-07 56.4 30.0 249 214-465 18-347 (353)
307 2vpj_A Kelch-like protein 12; 98.1 0.0015 5.2E-08 59.2 23.8 234 224-475 14-281 (301)
308 2ism_A Putative oxidoreductase 98.0 0.0062 2.1E-07 56.5 27.5 229 264-502 31-333 (352)
309 1n7d_A LDL receptor, low-densi 98.0 4.1E-05 1.4E-09 78.1 12.6 217 284-511 385-611 (699)
310 2vpj_A Kelch-like protein 12; 98.0 0.0016 5.4E-08 59.0 21.8 225 274-512 14-276 (301)
311 2xn4_A Kelch-like protein 2; s 97.9 0.0042 1.4E-07 56.2 23.6 224 275-512 16-274 (302)
312 3ii7_A Kelch-like protein 7; p 97.9 0.0065 2.2E-07 55.0 24.3 232 226-475 13-275 (306)
313 2xn4_A Kelch-like protein 2; s 97.9 0.0042 1.4E-07 56.2 22.7 232 225-476 16-280 (302)
314 3ii7_A Kelch-like protein 7; p 97.8 0.0063 2.1E-07 55.2 23.2 225 276-512 13-270 (306)
315 3sre_A PON1, serum paraoxonase 97.8 0.0078 2.7E-07 55.3 23.5 189 216-416 52-285 (355)
316 1xi4_A Clathrin heavy chain; a 97.8 0.0022 7.5E-08 68.4 21.1 234 234-490 47-307 (1630)
317 3das_A Putative oxidoreductase 97.8 0.022 7.7E-07 52.0 28.6 152 211-365 29-218 (347)
318 4asc_A Kelch repeat and BTB do 97.7 0.014 4.9E-07 53.0 24.0 212 277-504 7-253 (315)
319 1zgk_A Kelch-like ECH-associat 97.7 0.01 3.5E-07 53.8 22.9 232 223-475 23-290 (308)
320 1zgk_A Kelch-like ECH-associat 97.7 0.0073 2.5E-07 54.8 21.8 225 274-512 24-285 (308)
321 3ei3_A DNA damage-binding prot 97.7 0.09 3.1E-06 56.6 37.0 221 215-459 515-754 (1158)
322 1cru_A Protein (soluble quinop 97.7 0.043 1.5E-06 52.7 33.2 113 213-325 26-162 (454)
323 4asc_A Kelch repeat and BTB do 97.7 0.02 7E-07 52.0 23.9 232 227-477 7-282 (315)
324 3sre_A PON1, serum paraoxonase 97.7 0.0097 3.3E-07 54.7 21.1 191 267-470 53-296 (355)
325 2g8s_A Glucose/sorbosone dehyd 97.6 0.029 9.8E-07 51.9 24.3 244 264-508 18-348 (353)
326 2be1_A Serine/threonine-protei 97.6 0.0088 3E-07 54.4 19.1 114 226-346 11-139 (339)
327 3sbq_A Nitrous-oxide reductase 97.5 0.042 1.5E-06 52.6 22.6 273 228-502 73-453 (638)
328 3s25_A Hypothetical 7-bladed b 97.4 0.064 2.2E-06 48.2 23.7 210 223-473 23-256 (302)
329 2woz_A Kelch repeat and BTB do 97.4 0.042 1.5E-06 49.9 22.4 213 277-504 18-263 (318)
330 3ei3_A DNA damage-binding prot 97.4 0.19 6.5E-06 54.2 29.3 225 264-502 514-755 (1158)
331 3pbp_A Nucleoporin NUP82; beta 97.3 0.02 6.8E-07 53.1 18.6 151 315-468 29-208 (452)
332 2woz_A Kelch repeat and BTB do 97.3 0.088 3E-06 47.8 23.4 233 227-478 18-293 (318)
333 2xzh_A Clathrin heavy chain 1; 97.3 0.089 3E-06 46.9 28.7 238 218-474 71-334 (365)
334 3pbp_A Nucleoporin NUP82; beta 97.3 0.036 1.2E-06 51.4 19.6 147 222-375 29-208 (452)
335 3ott_A Two-component system se 97.2 0.25 8.5E-06 51.1 36.1 267 213-505 21-299 (758)
336 1bpo_A Protein (clathrin); cla 97.2 0.13 4.5E-06 47.8 29.5 238 218-474 70-333 (494)
337 3ott_A Two-component system se 97.1 0.3 1E-05 50.4 35.4 276 215-512 192-500 (758)
338 1tl2_A L10, protein (tachylect 97.0 0.015 5.3E-07 48.6 13.2 142 214-372 41-203 (236)
339 3das_A Putative oxidoreductase 97.0 0.055 1.9E-06 49.5 18.0 156 344-500 27-218 (347)
340 3s25_A Hypothetical 7-bladed b 97.0 0.19 6.4E-06 45.1 21.3 197 272-501 22-240 (302)
341 2uvk_A YJHT; unknown function, 96.9 0.27 9.2E-06 45.4 22.6 240 224-479 19-349 (357)
342 1cru_A Protein (soluble quinop 96.9 0.14 4.8E-06 49.1 20.6 113 349-461 27-163 (454)
343 2uvk_A YJHT; unknown function, 96.8 0.051 1.7E-06 50.3 16.8 222 274-505 19-327 (357)
344 2zwa_A Leucine carboxyl methyl 96.8 0.1 3.5E-06 53.2 19.9 203 273-476 396-639 (695)
345 1tl2_A L10, protein (tachylect 96.7 0.019 6.6E-07 48.0 10.9 179 275-466 4-204 (236)
346 3a9g_A Putative uncharacterize 96.6 0.076 2.6E-06 49.1 16.2 144 349-501 29-215 (354)
347 1xi4_A Clathrin heavy chain; a 96.4 0.26 9E-06 53.1 19.7 240 218-474 70-333 (1630)
348 3b7f_A Glycosyl hydrolase, BNR 95.9 1.2 4E-05 41.7 28.6 273 225-508 22-366 (394)
349 3b7f_A Glycosyl hydrolase, BNR 95.6 1.5 5E-05 41.0 27.8 270 213-492 54-391 (394)
350 3sbq_A Nitrous-oxide reductase 95.6 1.7 5.9E-05 41.9 22.0 222 224-460 141-453 (638)
351 2zwa_A Leucine carboxyl methyl 95.1 0.9 3.1E-05 46.2 17.7 153 316-474 396-579 (695)
352 2wg3_C Hedgehog-interacting pr 95.1 2.4 8.1E-05 40.5 31.6 245 214-460 14-354 (463)
353 2be1_A Serine/threonine-protei 94.5 0.064 2.2E-06 48.8 6.6 200 276-477 11-236 (339)
354 3qhy_B Beta-lactamase inhibito 92.7 4.9 0.00017 35.4 21.0 218 264-511 24-243 (282)
355 3q6k_A 43.2 kDa salivary prote 92.6 6.2 0.00021 36.4 17.2 142 371-512 124-304 (381)
356 2d68_A FOP, FGFR1OP; alpha hel 92.1 0.26 8.8E-06 33.6 4.7 29 9-37 20-48 (82)
357 4hvt_A Ritya.17583.B, post-pro 90.6 16 0.00055 37.0 22.4 244 217-471 132-429 (711)
358 3qhy_B Beta-lactamase inhibito 90.3 8.9 0.0003 33.7 22.0 242 215-498 25-268 (282)
359 3uc1_A DNA gyrase subunit A; D 89.3 12 0.00041 33.7 21.6 165 213-379 94-279 (327)
360 3q6k_A 43.2 kDa salivary prote 88.6 15 0.0005 33.9 20.8 216 214-459 87-341 (381)
361 3l6v_A GYRA, DNA gyrase subuni 86.7 19 0.00065 33.0 26.6 228 271-507 3-309 (370)
362 1zi0_A DNA gyrase subunit A; b 86.0 18 0.00063 32.1 27.1 230 273-508 1-271 (307)
363 4gq2_M Nucleoporin NUP120; bet 84.9 18 0.00062 38.2 15.2 39 264-302 236-274 (950)
364 1wp5_A Topoisomerase IV; broke 84.8 22 0.00074 31.9 27.1 243 223-472 3-277 (323)
365 1suu_A DNA gyrase subunit A; t 83.3 25 0.00084 31.4 29.2 197 223-427 6-230 (312)
366 3kci_A Probable E3 ubiquitin-p 82.2 31 0.0011 31.8 25.9 196 308-510 54-289 (389)
367 2wg3_C Hedgehog-interacting pr 82.0 36 0.0012 32.4 28.4 106 264-369 14-159 (463)
368 3no0_A DNA gyrase subunit A; D 82.0 25 0.00086 30.6 21.6 166 210-379 64-246 (276)
369 3no0_A DNA gyrase subunit A; D 81.5 26 0.0009 30.5 21.6 156 214-379 24-196 (276)
370 1suu_A DNA gyrase subunit A; t 80.8 30 0.001 30.8 28.5 193 273-471 6-230 (312)
371 1sqj_A OXG-RCBH, oligoxylogluc 79.0 62 0.0021 33.3 29.4 158 263-423 14-196 (789)
372 4fhn_B Nucleoporin NUP120; pro 78.6 73 0.0025 34.5 17.4 39 350-388 239-277 (1139)
373 1wp5_A Topoisomerase IV; broke 78.0 38 0.0013 30.3 23.9 191 273-472 3-225 (323)
374 3uc1_A DNA gyrase subunit A; D 75.5 45 0.0015 29.9 26.1 229 276-509 4-274 (327)
375 4gq2_M Nucleoporin NUP120; bet 74.5 91 0.0031 32.9 23.3 39 350-388 237-275 (950)
376 1zi0_A DNA gyrase subunit A; b 73.7 48 0.0016 29.4 27.0 245 223-472 1-277 (307)
377 3kci_A Probable E3 ubiquitin-p 72.8 58 0.002 29.9 29.1 237 265-510 54-341 (389)
378 1sqj_A OXG-RCBH, oligoxylogluc 69.6 1.1E+02 0.0036 31.6 23.4 159 306-465 14-194 (789)
379 3f7f_A Nucleoporin NUP120; nuc 69.4 27 0.00093 35.0 10.1 36 265-302 223-258 (729)
380 2xz2_A CSTF-50, isoform B; RNA 68.9 5.6 0.00019 25.4 3.4 33 5-37 14-46 (66)
381 2yvq_A Carbamoyl-phosphate syn 68.7 6.3 0.00021 30.4 4.5 58 6-65 35-106 (143)
382 3l6v_A GYRA, DNA gyrase subuni 66.7 78 0.0027 28.9 26.8 245 223-471 5-315 (370)
383 3zwu_A Alkaline phosphatase PH 65.3 19 0.00065 35.4 8.1 60 265-324 477-548 (592)
384 4fhn_B Nucleoporin NUP120; pro 65.0 66 0.0023 34.8 13.1 38 308-345 239-276 (1139)
385 2cn3_A Xyloglucanase, beta-1,4 64.1 1.3E+02 0.0044 30.6 29.2 192 265-459 24-261 (737)
386 4a9v_A PHOX; hydrolase, beta-p 62.3 36 0.0012 33.1 9.2 59 443-501 477-548 (592)
387 3zwu_A Alkaline phosphatase PH 61.9 26 0.00088 34.5 8.4 58 444-501 478-548 (592)
388 4a9v_A PHOX; hydrolase, beta-p 61.8 34 0.0012 33.3 8.9 62 264-325 476-549 (592)
389 3f7f_A Nucleoporin NUP120; nuc 59.7 50 0.0017 33.2 9.9 38 214-253 222-259 (729)
390 3mez_B Mannose-specific lectin 57.4 52 0.0018 23.9 10.2 60 275-336 24-83 (113)
391 1oyi_A Double-stranded RNA-bin 53.1 6.7 0.00023 26.7 1.8 33 4-38 12-44 (82)
392 4hvt_A Ritya.17583.B, post-pro 52.4 2E+02 0.0068 29.1 22.1 225 266-502 131-415 (711)
393 4gco_A Protein STI-1; structur 49.7 32 0.0011 25.3 5.6 100 15-118 21-122 (126)
394 3lpz_A GET4 (YOR164C homolog); 44.9 98 0.0034 27.7 8.5 117 43-180 15-134 (336)
395 1vk8_A Hypothetical protein TM 44.4 4.5 0.00015 29.2 -0.1 35 26-65 37-71 (106)
396 2zux_A YESW protein; beta-prop 44.0 2.4E+02 0.0081 27.5 22.5 201 286-494 152-424 (591)
397 3ct5_A Morphogenesis protein 1 40.8 18 0.0006 28.5 2.8 31 7-37 14-49 (159)
398 3a0f_A Xyloglucanase; beta-pro 40.0 3.2E+02 0.011 27.8 30.2 156 262-419 19-203 (763)
399 3mkr_A Coatomer subunit epsilo 37.3 1.1E+02 0.0039 26.4 8.0 88 9-102 66-158 (291)
400 4asv_A Small glutamine-rich te 36.9 21 0.00073 24.6 2.3 19 3-21 15-33 (92)
401 2nxp_A Transcription initiatio 36.1 43 0.0015 26.2 4.3 48 71-120 51-98 (156)
402 2eap_A Lymphocyte cytosolic pr 35.4 30 0.001 23.7 2.8 22 14-36 27-48 (90)
403 1kdl_A YOPD protein; yersinia, 35.3 23 0.00078 17.5 1.6 13 8-20 5-17 (26)
404 2vgx_A Chaperone SYCD; alterna 35.2 76 0.0026 24.0 5.8 91 13-104 27-119 (148)
405 1v32_A AT5G08430, hypothetical 33.0 23 0.00077 25.3 2.0 21 4-24 34-54 (101)
406 1lxj_A YBL001C, hypothetical 1 32.1 8.1 0.00028 27.8 -0.4 35 25-64 27-61 (104)
407 2xcb_A PCRH, regulatory protei 30.9 98 0.0033 22.9 5.8 90 13-103 24-115 (142)
408 1b93_A Protein (methylglyoxal 30.8 57 0.0019 25.3 4.1 58 6-64 22-91 (152)
409 2ibo_A Hypothetical protein SP 30.8 9.1 0.00031 27.5 -0.3 30 30-64 28-57 (104)
410 1yqh_A DUF77, IG hypothetical 30.6 10 0.00035 27.5 -0.0 30 30-64 33-62 (109)
411 1rij_A E6APN1 peptide; Trp-CAG 30.6 31 0.001 16.5 1.6 12 11-22 3-14 (26)
412 2jvf_A De novo protein M7; tet 30.6 18 0.00061 23.1 1.0 18 8-25 63-80 (96)
413 3him_A Probable transcriptiona 30.3 58 0.002 26.2 4.7 59 6-64 17-80 (211)
414 2zux_A YESW protein; beta-prop 29.5 4E+02 0.014 25.9 25.8 279 212-511 177-529 (591)
415 2epi_A UPF0045 protein MJ1052; 29.0 9.3 0.00032 27.3 -0.5 34 27-65 29-62 (100)
416 1xks_A Nuclear pore complex pr 29.0 3.7E+02 0.013 25.3 15.0 154 353-511 42-234 (450)
417 2xev_A YBGF; tetratricopeptide 29.0 95 0.0033 22.1 5.3 93 11-103 6-105 (129)
418 2yu0_A Interferon-activable pr 27.9 86 0.0029 21.9 4.2 34 1-34 39-86 (94)
419 1lxn_A Hypothetical protein MT 27.6 12 0.0004 26.7 -0.2 36 24-64 22-58 (99)
420 2wpv_A GET4, UPF0363 protein Y 27.5 3.2E+02 0.011 24.1 10.2 116 44-180 17-132 (312)
421 1elw_A TPR1-domain of HOP; HOP 27.4 1.5E+02 0.0051 20.2 7.1 92 10-102 7-100 (118)
422 4gof_A Small glutamine-rich te 27.0 37 0.0013 20.6 2.0 14 8-21 3-16 (52)
423 1v31_A Hypothetical protein RA 26.8 35 0.0012 23.8 2.2 22 4-25 26-47 (93)
424 3s5r_A Transcriptional regulat 26.8 1E+02 0.0036 24.7 5.7 61 4-64 9-74 (216)
425 2lni_A Stress-induced-phosphop 26.4 1.7E+02 0.0059 20.6 7.3 95 8-103 17-113 (133)
426 2hxo_A Putative TETR-family tr 26.2 1.3E+02 0.0045 25.1 6.2 57 4-60 15-76 (237)
427 1uhr_A SWI/SNF related, matrix 25.5 36 0.0012 23.8 2.0 22 4-25 26-47 (93)
428 1zvu_A Topoisomerase IV subuni 24.9 5.4E+02 0.018 25.8 15.4 78 349-427 554-632 (716)
429 3lc0_A Histidyl-tRNA synthetas 24.8 2.3E+02 0.0079 26.7 8.1 16 8-23 163-178 (456)
430 2lxb_A Small glutamine-rich te 24.4 45 0.0015 22.0 2.1 17 5-21 5-21 (74)
431 3upv_A Heat shock protein STI1 23.9 1.2E+02 0.0041 21.6 5.0 93 10-103 7-101 (126)
432 2cp8_A NEXT to BRCA1 gene 1 pr 23.8 57 0.0019 20.0 2.3 22 5-26 3-24 (54)
433 3s9j_A Member of DUF4221 famil 23.8 4.1E+02 0.014 24.1 9.7 81 357-438 36-120 (369)
434 3csq_A Morphogenesis protein 1 23.8 45 0.0015 30.0 2.8 30 8-37 15-49 (334)
435 1q47_A Semaphorin 3A; beta pro 23.7 1.9E+02 0.0066 27.6 7.4 55 455-509 423-487 (495)
436 1zvt_A Topoisomerase IV subuni 23.3 3.4E+02 0.012 23.0 16.6 189 274-464 1-210 (256)
437 1xmk_A Double-stranded RNA-spe 23.1 36 0.0012 22.9 1.5 33 5-38 7-39 (79)
438 3aqt_A Bacterial regulatory pr 22.9 1.1E+02 0.0039 25.5 5.2 58 5-62 46-108 (245)
439 3c2b_A Transcriptional regulat 22.9 1.4E+02 0.0048 24.1 5.7 56 6-61 16-76 (221)
440 2j4b_A TAF5, transcription ini 22.6 1.4E+02 0.0047 22.6 5.0 33 71-103 32-64 (138)
441 3qou_A Protein YBBN; thioredox 21.8 3.4E+02 0.012 23.1 8.3 86 15-101 125-212 (287)
442 2dba_A Smooth muscle cell asso 21.6 2.3E+02 0.0079 20.4 7.7 93 10-103 31-128 (148)
443 3bjb_A Probable transcriptiona 21.4 94 0.0032 25.1 4.3 53 6-58 23-80 (207)
444 3eup_A Transcriptional regulat 21.4 46 0.0016 26.7 2.3 52 5-56 11-67 (204)
445 1vi0_A Transcriptional regulat 21.4 71 0.0024 25.8 3.5 54 4-57 7-65 (206)
446 1z0x_A Transcriptional regulat 21.1 2.2E+02 0.0074 23.3 6.5 54 1-54 1-60 (220)
447 1pb6_A Hypothetical transcript 20.7 1.1E+02 0.0036 24.6 4.5 59 6-64 19-82 (212)
448 3qbm_A TETR transcriptional re 20.7 72 0.0025 25.3 3.4 34 5-38 7-41 (199)
449 3on2_A Probable transcriptiona 20.6 1.8E+02 0.0061 22.8 5.9 51 6-56 13-68 (199)
450 3tl4_X Glutaminyl-tRNA synthet 20.6 75 0.0026 25.6 3.2 84 4-87 81-180 (187)
451 3jsj_A Putative TETR-family tr 20.5 1E+02 0.0035 24.2 4.3 59 5-63 9-71 (190)
452 3ljl_A Transcriptional regulat 20.5 97 0.0033 23.6 4.0 53 6-58 15-72 (156)
453 1q47_A Semaphorin 3A; beta pro 20.3 2.8E+02 0.0096 26.5 7.7 74 215-289 405-487 (495)
454 3gyz_A Chaperone protein IPGC; 20.3 51 0.0018 25.3 2.2 88 6-103 7-99 (151)
455 3ppb_A Putative TETR family tr 20.2 97 0.0033 24.3 4.1 59 4-62 8-71 (195)
456 3frq_A Repressor protein MPHR( 20.1 78 0.0027 25.2 3.4 58 4-61 7-69 (195)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-56 Score=432.03 Aligned_cols=285 Identities=25% Similarity=0.441 Sum_probs=262.7
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
.+|.+.|++++|+|++.+|++|+.||+|+|||+.+++... .+.+|...|.+++|+|++++|++|+.||+|++
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~--------~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--------TLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE--------EECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE--------EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3999999999999999999999999999999999887554 45569999999999999999999999999999
Q ss_pred EEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCC
Q 010362 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369 (512)
Q Consensus 290 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 369 (512)
||+.+++++..+. +|...|.+++|+|++++|++|+.|++|++||++++.++..+.+|...|.++.++|++.++++|+.|
T Consensus 177 wd~~~~~~~~~~~-~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 177 WDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp EETTSSCEEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EeCCCCceeEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 9999999988886 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCC-------------------CCeEEEEcCCCcEEEEecC-Ce
Q 010362 370 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN-------------------PDHIVVCNKTSSIYIMTLQ-GQ 429 (512)
Q Consensus 370 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------~~~l~~~~~~~~i~~~~~~-~~ 429 (512)
|+|++||++++.+...+. +|...+.++.|+|+. ..++++++.|+.|++||++ +.
T Consensus 256 ~~v~vwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELR------EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp SCEEEEETTTCCEEEEEC------CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred CeEEEEECCCCceeeEec------CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999999999988877664 567889999999963 3689999999999999998 55
Q ss_pred EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEE
Q 010362 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509 (512)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~i 509 (512)
....+.. +...+.+++|+|+|++|++|+.||.|++||+.+++++..+.+|...|++++|+|++.+|++|+.||+|++
T Consensus 330 ~~~~~~~---h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~v 406 (410)
T 1vyh_C 330 CLMTLVG---HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406 (410)
T ss_dssp EEEEEEC---CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred eEEEEEC---CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 5555543 4567999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecC
Q 010362 510 WKP 512 (512)
Q Consensus 510 W~~ 512 (512)
|+.
T Consensus 407 W~~ 409 (410)
T 1vyh_C 407 WEC 409 (410)
T ss_dssp EC-
T ss_pred EeC
Confidence 984
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.1e-48 Score=363.58 Aligned_cols=290 Identities=19% Similarity=0.337 Sum_probs=258.4
Q ss_pred cceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC
Q 010362 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ 283 (512)
Q Consensus 204 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~ 283 (512)
...+++ +|.+.|++++|+|++++|++|+.||+|++||+.+++.... +..|...|.+++|+|++++|++|+.
T Consensus 47 ~~~~l~-gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~s~~~ 117 (340)
T 1got_B 47 TRRTLR-GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHA--------IPLRSSWVMTCAYAPSGNYVACGGL 117 (340)
T ss_dssp EEEEEC-CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE--------EECSSSCEEEEEECTTSSEEEEEET
T ss_pred hheeec-CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceE--------eecCCccEEEEEECCCCCEEEEEeC
Confidence 344554 9999999999999999999999999999999988776543 3458999999999999999999999
Q ss_pred CCeEEEEEccCCe----eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCC
Q 010362 284 DGKIKVWRIRSGQ----CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359 (512)
Q Consensus 284 dg~i~vwd~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 359 (512)
|+.|++|++.++. ....+. +|...|.++.|++++. +++++.|+.|++||+++++.+..+.+|...|.+++|+|+
T Consensus 118 d~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 118 DNICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp TCEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CCeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC
Confidence 9999999998753 344454 7999999999998764 889999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcc
Q 010362 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKR 439 (512)
Q Consensus 360 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 439 (512)
++++++|+.||.|++||++++.+...+. +|...|.+++|+|++ ..+++++.|+.|++||++............
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~~~~~~~~~------~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVREGMCRQTFT------GHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEEC------CCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCTT
T ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEEc------CCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCcEEEEEccCC
Confidence 9999999999999999999998877765 567899999999987 899999999999999998543333333333
Q ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 440 ~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
....+.+++|+|+|+++++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++.+|+||+.||+|+|||
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 345799999999999999999999999999999999999999999999999999999999999999999997
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-47 Score=356.17 Aligned_cols=286 Identities=17% Similarity=0.339 Sum_probs=258.3
Q ss_pred ecCcCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 210 FGTKSHAECARFSPD----GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~----~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
.+|.+.|++++|+|+ +.+|++|+.||+|+||++.+++... ...+.+|...|.+++|+|++.++++++.|+
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~------~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDL------QWSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEE------EEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeee------eeeeccCCCCEEEEEECCCCCEEEEEeCCC
Confidence 389999999999984 6799999999999999987765322 224667999999999999999999999999
Q ss_pred eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEE
Q 010362 286 KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVT 365 (512)
Q Consensus 286 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 365 (512)
+|++||+.+++.+..+. .+...+.+++|+|++++|++|+.||.|++||+++++....+..|...|.+++|+|++++|++
T Consensus 103 ~i~lWd~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSID-AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp EEEEEETTTTEEEEEEE-CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred cEEEEECCCCCEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE
Confidence 99999999999988886 77888999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeCCcccCCcE
Q 010362 366 ASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSGKREGGDF 444 (512)
Q Consensus 366 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~ 444 (512)
++.||.|++||+++++....+. +|..+|.+++|+|++ .++++++.|+.|++||++.. ....+.. +...+
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~spd~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~---h~~~v 251 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLE------GHAMPIRSLTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSG---HASWV 251 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEEC------CCSSCCCEEEECTTS-CEEEEECTTSCEEEEETTTCCEEEEECC---CSSCE
T ss_pred EcCCCeEEEEECCCCcEEEEEc------ccCCceeEEEEcCCC-CEEEEEcCCCeEEEEECCCcceeEEEcC---CCCce
Confidence 9999999999999998887765 567789999999987 89999999999999999844 4444332 45679
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 445 VAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 445 ~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|.+++|+|++.+|++++.||+|++||.
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999984
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.3e-47 Score=359.28 Aligned_cols=292 Identities=22% Similarity=0.351 Sum_probs=258.4
Q ss_pred ccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe
Q 010362 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282 (512)
Q Consensus 203 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~ 282 (512)
....++. +|.+.|+|++|+|++++||+|+.||+|+|||..+++.... +..|...|.+++|+|++.++++|+
T Consensus 55 ~~~~~l~-gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~--------~~~~~~~v~~~~~sp~g~~lasg~ 125 (354)
T 2pbi_B 55 KTRRTLK-GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHA--------VTMPCTWVMACAYAPSGCAIACGG 125 (354)
T ss_dssp CEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--------EECSSSCCCEEEECTTSSEEEEES
T ss_pred EEEEEec-CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceE--------EecCCCCEEEEEECCCCCEEEEee
Confidence 3445555 9999999999999999999999999999999988765543 344888999999999999999999
Q ss_pred CCCeEEEEEccCC------eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEE
Q 010362 283 QDGKIKVWRIRSG------QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIF 356 (512)
Q Consensus 283 ~dg~i~vwd~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~ 356 (512)
.|+.+++|++... .....+. .|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.+++|
T Consensus 126 ~d~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~ 204 (354)
T 2pbi_B 126 LDNKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL 204 (354)
T ss_dssp TTSEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCCCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEE
Confidence 9999999998643 2234444 78999999999999999999999999999999999999999999999999999
Q ss_pred cC--CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEe
Q 010362 357 TN--DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSF 434 (512)
Q Consensus 357 ~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 434 (512)
+| ++++|++|+.||+|++||++++++...+. +|...|.+++|+|++ ..+++++.|+.+++||++.......
T Consensus 205 ~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~------~h~~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 205 APSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE------THESDVNSVRYYPSG-DAFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp CCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec------CCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEE
Confidence 87 56899999999999999999998887764 567899999999987 8999999999999999985443333
Q ss_pred eCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 435 ~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
.........+.+++|+|+|+++++|+.||.|++||+.+++.+..+.+|.+.|++++|+|++++|++|+.||+|++|+
T Consensus 278 ~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 278 YSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 33333345688999999999999999999999999999999999999999999999999999999999999999996
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.9e-45 Score=341.25 Aligned_cols=287 Identities=21% Similarity=0.329 Sum_probs=251.0
Q ss_pred ceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC
Q 010362 205 SHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 284 (512)
Q Consensus 205 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d 284 (512)
.+++. +|.+.|++++|+|+|++|++|+.||+|++||+.++..... +.+|..+|.+++|+|++++|++|+.|
T Consensus 6 ~~~~~-~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 6 KKTFS-NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRS--------IQVTETPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp EEEEE-EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE--------EECCSSCEEEEEEEGGGTEEEEEETT
T ss_pred EEeec-CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEE--------eeccCCcEEEEEEeCCCCEEEEECCC
Confidence 44554 8999999999999999999999999999999998876553 44589999999999999999999999
Q ss_pred CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-ceeEEeeCCccceeEEEEcC-CCCE
Q 010362 285 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSSYVNDAIFTN-DGSR 362 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~ 362 (512)
++|++||+.+++.+..+. .|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|...|.+++|+| ++..
T Consensus 77 ~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp SEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred CEEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 999999999999999887 89999999999999999999999999999999887 45567889999999999999 6789
Q ss_pred EEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCC-CCCeEEEEcCCCcEEEEecCC-eEEEEeeCCccc
Q 010362 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK-NPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKRE 440 (512)
Q Consensus 363 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~~ 440 (512)
|++|+.||+|++||++++.....+.. ++...+..+.++|. +..++++++.|+.|++||++. .....+.. +
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~---h 227 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTT-----GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG---H 227 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEEC-----CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC---C
T ss_pred EEEEeCCCeEEEEECCCCCccceecc-----CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC---C
Confidence 99999999999999988765554432 34567888999875 347899999999999999984 44555543 4
Q ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCC--eEEEEECCCeEEEe
Q 010362 441 GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN--LLATYGEDCTMKLW 510 (512)
Q Consensus 441 ~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~--~l~s~~~dg~i~iW 510 (512)
...+..++|+|++.+|++|+.||.|++||..+++++..+..|...+.+++|+|++. ++++|+.||. .+|
T Consensus 228 ~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~-~~~ 298 (304)
T 2ynn_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGF-TVL 298 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEE-EEE
T ss_pred CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCce-EEE
Confidence 56799999999999999999999999999999999999999999999999999875 5888887774 444
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.4e-45 Score=339.98 Aligned_cols=288 Identities=31% Similarity=0.547 Sum_probs=256.2
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
.+|...|++++|+|+|++|++|+.||.|++|+..+++... .+.+|...|.+++|+|++++|++|+.||.|++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~--------~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--------TISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------EECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch--------hhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 3999999999999999999999999999999998877554 34569999999999999999999999999999
Q ss_pred EEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCC
Q 010362 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369 (512)
Q Consensus 290 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 369 (512)
||+.+++.+..+. .|...|.+++|+|+++++++|+.||.|++||+++++.+..+..|..+|.+++|+|+++++++++.|
T Consensus 92 wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 92 WDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 9999999988886 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCcccCCcEEEEE
Q 010362 370 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAAC 448 (512)
Q Consensus 370 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 448 (512)
|.|++||+++++....+.. .+...+..++|+|++ .++++++.|+.|++||++. .....+..+......+....
T Consensus 171 ~~i~~wd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLID-----DDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp SCEEEEETTTCCEEEEECC-----SSCCCEEEEEECTTS-SEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred CcEEEEECCCCceeeEEec-----cCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 9999999999887766542 245678999999988 8899999999999999984 44555544332222233344
Q ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEE--CCCeEEEecC
Q 010362 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG--EDCTMKLWKP 512 (512)
Q Consensus 449 ~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~--~dg~i~iW~~ 512 (512)
..+++.++++|+.||.|++||+.+++++..+.+|...|.+++|+|+++++++++ .||+|++|+.
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 457899999999999999999999999999999999999999999999999997 6999999974
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.1e-46 Score=352.75 Aligned_cols=290 Identities=18% Similarity=0.264 Sum_probs=240.4
Q ss_pred ecCcCceEEEEECCCCCEEEEEeC------CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSF------DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ 283 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~ 283 (512)
..|...|++++|||||++||+|+. ||.|++|+..++.....+. ....+|...|.+++|+|++. +++++.
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~----~~~~~~~~~V~~~~~s~d~~-~l~~s~ 113 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC----TAGVQTEAGVTDVAWVSEKG-ILVASD 113 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC----SEEEECSSCEEEEEEETTTE-EEEEET
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe----cccCCCCCCEEEEEEcCCCC-EEEEEC
Confidence 379999999999999999999997 7889999987776544332 23456889999999999986 556788
Q ss_pred CCeEEEEEccCCeeeEEe---ccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCC
Q 010362 284 DGKIKVWRIRSGQCLRRL---ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG 360 (512)
Q Consensus 284 dg~i~vwd~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 360 (512)
||+|++||+.+++..... ..+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|...|++++|+|++
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 999999999988754322 23688999999999999999999999999999999999999999999999999999987
Q ss_pred C-EEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCc
Q 010362 361 S-RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGK 438 (512)
Q Consensus 361 ~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~ 438 (512)
. .+++++.||+|++||+++++....+.. ..+...+.+++|+|++..++++++.|+.|++||++. .....+..
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~----~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~-- 267 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDF----CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV-- 267 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCC----TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC--
T ss_pred CceeeeeccCCceEEEECCCCceeeeeee----ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec--
Confidence 5 789999999999999999876655442 235678999999999888999999999999999984 44444433
Q ss_pred ccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcC-CCCeEEEEECCCeEEEecC
Q 010362 439 REGGDFVAACVSPKG-EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 439 ~~~~~~~~~~~s~~g-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~~~dg~i~iW~~ 512 (512)
+...+.+++|+|++ ++|++|+.||.|++||+.+++++..+ +|.+.|++|+|+| ++.+|+|||.||+|++|+.
T Consensus 268 -~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 268 -HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp -CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred -cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 35679999999987 57999999999999999999988766 6999999999999 7999999999999999983
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-45 Score=346.16 Aligned_cols=291 Identities=17% Similarity=0.223 Sum_probs=239.7
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeecccc---ccccceeeccCcceeEEEEcCCCCeEEEEeCCCeE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ---YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKI 287 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i 287 (512)
.|...|.+++|+|||++|++++ |+++++||........... .........|...|.+++|+|++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 5677899999999999999888 7788888743211111000 01111233467889999999985 68899999999
Q ss_pred EEEEccCCeeeEEe---ccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCC-EE
Q 010362 288 KVWRIRSGQCLRRL---ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RV 363 (512)
Q Consensus 288 ~vwd~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 363 (512)
++||+.+++..... ..+|...|.+++|+|++++|++|+.|++|++||+++++.+..+.+|...|++++|+|++. .+
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l 185 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVF 185 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCce
Confidence 99999998755433 237899999999999999999999999999999999999999999999999999999874 78
Q ss_pred EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCC
Q 010362 364 VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGG 442 (512)
Q Consensus 364 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~ 442 (512)
++++.||+|++||+++++....+... .+...+.+++|+|.+..++++++.|+.|++||++ ++.+..+.. +..
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~---h~~ 258 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPASQIGCS----APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV---HSQ 258 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEEECC--------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC---CSS
T ss_pred eeeccccccccccccccceeeeeecc----eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC---CCC
Confidence 99999999999999999887776533 3456789999999988999999999999999998 444455443 456
Q ss_pred cEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCC-eEEEEECCCeEEEec
Q 010362 443 DFVAACVSPKG-EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN-LLATYGEDCTMKLWK 511 (512)
Q Consensus 443 ~~~~~~~s~~g-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~~~dg~i~iW~ 511 (512)
.|.+++|+|+| ++|++|+.||.|++||+.++++. .+.+|.+.|++++|+|+++ +|+|||.||+|++|+
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 79999999998 57999999999999999998876 4678999999999999876 678999999999997
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.6e-46 Score=355.61 Aligned_cols=294 Identities=19% Similarity=0.355 Sum_probs=251.7
Q ss_pred cccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEE
Q 010362 202 TTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG 281 (512)
Q Consensus 202 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~ 281 (512)
..+.+++. +|.+.|++++|+|++++|++|+.||+|+|||+.+++.... +.+|...|.+++|+|++++|++|
T Consensus 56 ~~~~~~l~-gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~--------~~~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 56 LVCCRTLQ-GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHA--------IKLHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp CEEEEEEC-CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE--------EECCCTTCCCCEECTTSSEEEEC
T ss_pred eEEeeccc-ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceE--------EecCCCCEEEEEECCCCCEEEEe
Confidence 34445565 9999999999999999999999999999999988876553 44599999999999999999999
Q ss_pred eCCCeEEEEEccCCe-------eeEEeccccccCeEEEEEecC-CCEEEEEeCCCcEEEEeCCCCceeEEe-----eCCc
Q 010362 282 SQDGKIKVWRIRSGQ-------CLRRLERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEF-----RGHS 348 (512)
Q Consensus 282 ~~dg~i~vwd~~~~~-------~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~i~d~~~~~~~~~~-----~~~~ 348 (512)
+.|+.+++||+.+.. ....+ .+|...|.++.|+|+ +..|++|+.|++|++||+++++.+..+ .+|.
T Consensus 127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~-~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRDGNMPVSRVL-TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp CSSSCCEEEECCCCSSCCCSSTTCCBC-CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred eCCCcEEEEECCCCccccCCccceeec-cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 999999999987532 22333 389999999999996 457999999999999999999988877 6788
Q ss_pred cceeEEEEcC-CCCEEEEEeCCCcEEEEeCCC-CceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEec
Q 010362 349 SYVNDAIFTN-DGSRVVTASSDCTVKVWDLKS-TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426 (512)
Q Consensus 349 ~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~ 426 (512)
..|.+++|++ +++++++|+.||+|++||++. +.....+ .+|...|.+++|+|++ ..+++++.|+.|++||+
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~------~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY------HGHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE------CCCSSCCCEEEECTTS-SEEEEECSSSCEEEEET
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE------CCcCCCeEEEEEecCC-CeEEEEcCCCeEEEEEC
Confidence 9999999987 889999999999999999984 3444444 3678899999999987 89999999999999999
Q ss_pred CC-eEEEEeeCCcc----cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEec----cccCCCeEEEEEcCCCCe
Q 010362 427 QG-QVVKSFSSGKR----EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM----KVHEKDVIGVTHHPHRNL 497 (512)
Q Consensus 427 ~~-~~~~~~~~~~~----~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~----~~h~~~v~~v~~~p~~~~ 497 (512)
+. .....+..... ....+.+++|+|+|+++++|+.||.|++||..+++....+ .+|.+.|++++|+|++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 279 RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence 84 44444433221 1234789999999999999999999999999999887766 679999999999999999
Q ss_pred EEEEECCCeEEEecC
Q 010362 498 LATYGEDCTMKLWKP 512 (512)
Q Consensus 498 l~s~~~dg~i~iW~~ 512 (512)
|+|||.||+|+||+.
T Consensus 359 l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 359 LCTGSWDKNLKIWAF 373 (380)
T ss_dssp EEEECTTSCEEEEEC
T ss_pred EEEeeCCCCEEEEec
Confidence 999999999999984
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-44 Score=341.54 Aligned_cols=293 Identities=20% Similarity=0.320 Sum_probs=244.8
Q ss_pred cceEEEecCcC-ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe
Q 010362 204 LSHTIKFGTKS-HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282 (512)
Q Consensus 204 ~~~~~~~~h~~-~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~ 282 (512)
+.+++. +|.. .|++++|+|+|++||+|+.||+|+|||+.++....... ...+|...|.+++|+|++++|++|+
T Consensus 7 ~~~~~~-~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~-----~~~~h~~~v~~~~~sp~g~~l~s~s 80 (345)
T 3fm0_A 7 LLGRVP-AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV-----LSEGHQRTVRKVAWSPCGNYLASAS 80 (345)
T ss_dssp EEEEEC-CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEE-----ECSSCSSCEEEEEECTTSSEEEEEE
T ss_pred Eeeeec-CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeee-----eccccCCcEEEEEECCCCCEEEEEE
Confidence 344555 7777 99999999999999999999999999998775432111 2246999999999999999999999
Q ss_pred CCCeEEEEEccCCe--eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc---eeEEeeCCccceeEEEEc
Q 010362 283 QDGKIKVWRIRSGQ--CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK---LLKEFRGHSSYVNDAIFT 357 (512)
Q Consensus 283 ~dg~i~vwd~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~---~~~~~~~~~~~v~~~~~~ 357 (512)
.|++|++||+.++. ++..+. +|...|.+++|+|++++|++|+.|+.|++||++++. .+..+.+|...|.+++|+
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred CCCcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 99999999998764 456665 899999999999999999999999999999998764 456778899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcee--eecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-------
Q 010362 358 NDGSRVVTASSDCTVKVWDLKSTDCL--QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG------- 428 (512)
Q Consensus 358 ~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~------- 428 (512)
|++++|++++.|++|++||.+++... ..+ .+|...|.+++|+|++ .++++++.|+.|++|+...
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~------~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATL------EGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEE------CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred CCCCEEEEEeCCCcEEEEEecCCCEEEEEEe------cCCCCceEEEEECCCC-CEEEEEeCCCeEEEeccccCCCCccc
Confidence 99999999999999999999876532 333 3678899999999987 8999999999999999631
Q ss_pred ---------eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe---------eEEeccccCCCeEEEE
Q 010362 429 ---------QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK---------LEHLMKVHEKDVIGVT 490 (512)
Q Consensus 429 ---------~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~v~ 490 (512)
..+..+. ..+...+.+++|+|++..+++++.|+.|++|+...+. ......+|...|++++
T Consensus 233 ~~~~~~~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 310 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLS--GFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA 310 (345)
T ss_dssp CCC---CEEEEEEEEC--SSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEE
T ss_pred eeeccCCccceeEEec--CCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeE
Confidence 0111111 1245679999999999999999999999999987542 1233468999999999
Q ss_pred EcCCC-CeEEEEECCCeEEEecC
Q 010362 491 HHPHR-NLLATYGEDCTMKLWKP 512 (512)
Q Consensus 491 ~~p~~-~~l~s~~~dg~i~iW~~ 512 (512)
|+|++ .+|||||.||+|++|+.
T Consensus 311 ~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 311 WNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp ECSSSTTEEEEEETTSCEEEEEE
T ss_pred EeCCCceEEEEcCCCCcEEEEEe
Confidence 99987 59999999999999983
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.7e-44 Score=332.70 Aligned_cols=289 Identities=20% Similarity=0.350 Sum_probs=249.3
Q ss_pred eEEEecCcCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC
Q 010362 206 HTIKFGTKSHAECARFSPDG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 284 (512)
Q Consensus 206 ~~~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d 284 (512)
.++. +|.+.|++++|+|++ ++|++|+.||+|++|++....... ..+...+.+|...|.+++|+|++++|++|+.|
T Consensus 11 ~~l~-gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~---~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 11 GTLE-GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF---GVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEC-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE---EEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEc-cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc---cccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 3444 999999999999965 899999999999999986432111 12334677899999999999999999999999
Q ss_pred CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCC-----
Q 010362 285 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND----- 359 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~----- 359 (512)
++|++||+.+++.+..+. +|...|.+++|+|++.+|++|+.|++|++||++ ++.+..+.+|...|.++.|.|.
T Consensus 87 ~~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp SEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-----
T ss_pred CEEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCC
Confidence 999999999999998887 899999999999999999999999999999995 6778888999999999999985
Q ss_pred -CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeCC
Q 010362 360 -GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSG 437 (512)
Q Consensus 360 -~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~ 437 (512)
+..+++++.|+.|++||+++.+....+. +|...|.+++++|++ .++++++.|+.|++||+... ....+..
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~------~h~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~~~~~~~~~~- 236 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFI------GHNSNINTLTASPDG-TLIASAGKDGEIMLWNLAAKKAMYTLSA- 236 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEEC------CCCSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEEEEEEEC-
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeec------CCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEecC-
Confidence 4489999999999999999887766654 577899999999987 89999999999999999844 4444432
Q ss_pred cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecc--------ccCCCeEEEEEcCCCCeEEEEECCCeEEE
Q 010362 438 KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK--------VHEKDVIGVTHHPHRNLLATYGEDCTMKL 509 (512)
Q Consensus 438 ~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~--------~h~~~v~~v~~~p~~~~l~s~~~dg~i~i 509 (512)
...+.+++|+|++.++++++.+ .+++|++..+..+..+. .|...+.+++|+|++++|++|+.||.|++
T Consensus 237 ---~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~v 312 (319)
T 3frx_A 237 ---QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRV 312 (319)
T ss_dssp ---CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ---CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEE
Confidence 3469999999999999988755 59999999887766553 34667999999999999999999999999
Q ss_pred ecC
Q 010362 510 WKP 512 (512)
Q Consensus 510 W~~ 512 (512)
||.
T Consensus 313 Wd~ 315 (319)
T 3frx_A 313 WQV 315 (319)
T ss_dssp EEE
T ss_pred EEE
Confidence 983
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-43 Score=361.05 Aligned_cols=300 Identities=23% Similarity=0.317 Sum_probs=251.2
Q ss_pred cccceEEEecCcCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEE
Q 010362 202 TTLSHTIKFGTKSHAECARFSPDGQ-FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280 (512)
Q Consensus 202 ~~~~~~~~~~h~~~v~~~~~s~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s 280 (512)
......+. +|...|++++|+|++. .|++|+.|++|++||..+++... .+.+|...|.+++|+|++++|++
T Consensus 137 ~~~~~~l~-gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~--------~l~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 137 GTSNGNLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS--------TFGEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp CCBCBCCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE--------EECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCcceec-CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee--------eeccccCceEEEEECCCCCEEEE
Confidence 34444554 8999999999999987 69999999999999987766543 45679999999999999999999
Q ss_pred EeCCCeEEEEEccCCeeeEEecc------ccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeE------------
Q 010362 281 GSQDGKIKVWRIRSGQCLRRLER------AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLK------------ 342 (512)
Q Consensus 281 ~~~dg~i~vwd~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~------------ 342 (512)
|+.|++|++||+.+++.+..+.. +|...|.+++|+|++++|++++.|++|++||+++++.+.
T Consensus 208 ~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~ 287 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 287 (611)
T ss_dssp EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCE
T ss_pred EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcccee
Confidence 99999999999999998887743 689999999999999999999999999999998876543
Q ss_pred -------------------------------EeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCC
Q 010362 343 -------------------------------EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391 (512)
Q Consensus 343 -------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 391 (512)
.+.+|...|++++|+|++++|++++.||+|++||+.++.....+.....
T Consensus 288 ~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~ 367 (611)
T 1nr0_A 288 LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA 367 (611)
T ss_dssp EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS
T ss_pred EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCc
Confidence 3347888999999999999999999999999999988765443210000
Q ss_pred ------------------------------------------C-----------C-----------------------CC
Q 010362 392 ------------------------------------------L-----------R-----------------------GG 395 (512)
Q Consensus 392 ------------------------------------------~-----------~-----------------------~~ 395 (512)
. . .+
T Consensus 368 ~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~ 447 (611)
T 1nr0_A 368 TMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 447 (611)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEEC
T ss_pred ceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeec
Confidence 0 0 01
Q ss_pred CceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC-Ce
Q 010362 396 DASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS-GK 474 (512)
Q Consensus 396 ~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~-~~ 474 (512)
...+.+++++|++ .++++++.|+.|++||+.+........ ..+...+.+++|+|||++|++++.|+.|++||+.+ ++
T Consensus 448 ~~~v~~va~spdg-~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~ 525 (611)
T 1nr0_A 448 SYNSSCVALSNDK-QFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE 525 (611)
T ss_dssp SSCEEEEEECTTS-CEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE
T ss_pred CCCceEEEEeCCC-CEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCc
Confidence 2346788999987 899999999999999998654432222 34567899999999999999999999999999987 66
Q ss_pred eEEe--ccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 475 LEHL--MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 475 ~~~~--~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+... +.+|...|++++|+|++++||+|+.|++|++|+.
T Consensus 526 ~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 6554 3459999999999999999999999999999984
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.8e-44 Score=342.11 Aligned_cols=295 Identities=24% Similarity=0.374 Sum_probs=249.8
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccc----------eeeccCcceeEEEEcCCCCeEEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE----------TFMMHDETVLCIEFSRDSEMLAS 280 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~h~~~v~~l~~s~~~~~l~s 280 (512)
+|.+.|.|++|+|+|++||+|+ ++++++|++.+++....+...... ....+...|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 7999999999999999999987 789999999988776544321100 00123345999999999999999
Q ss_pred EeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcC-C
Q 010362 281 GSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN-D 359 (512)
Q Consensus 281 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~ 359 (512)
|+.||+|++||+.+++.+..+. +|...|.+++|+|++.+|++++.|++|++||+++++....+. +...+.+++|+| +
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGD 218 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTT
T ss_pred EcCCCeEEEEECCCCcEEEEEc-cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCC
Confidence 9999999999999999888886 899999999999999999999999999999999998887776 456699999999 8
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeecCCCC-CCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeE--------
Q 010362 360 GSRVVTASSDCTVKVWDLKSTDCLQTFKPPP-PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV-------- 430 (512)
Q Consensus 360 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~-------- 430 (512)
++++++++.||.|++||++++.....+.... ...+|...|.+++|+|++ ..+++++.|+.|++||++...
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEEC------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 9999999999999999999988777664322 224688899999999988 889999999999999987321
Q ss_pred -----EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcC------CCCeEE
Q 010362 431 -----VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP------HRNLLA 499 (512)
Q Consensus 431 -----~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p------~~~~l~ 499 (512)
...+. .+...+.+++++|++.+|++|+.||.|++||..+++++..+.+|.+.|.+++|+| ++++|+
T Consensus 298 ~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~ 374 (393)
T 1erj_A 298 NSGTCEVTYI---GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA 374 (393)
T ss_dssp ---CEEEEEE---CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred CCCcceEEEe---cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE
Confidence 11222 2456799999999999999999999999999999999999999999999999986 678999
Q ss_pred EEECCCeEEEecC
Q 010362 500 TYGEDCTMKLWKP 512 (512)
Q Consensus 500 s~~~dg~i~iW~~ 512 (512)
||+.||+|+||+.
T Consensus 375 sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 375 TGSGDCKARIWKY 387 (393)
T ss_dssp EEETTSEEEEEEE
T ss_pred EECCCCcEEECcc
Confidence 9999999999973
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-43 Score=330.63 Aligned_cols=292 Identities=20% Similarity=0.275 Sum_probs=232.8
Q ss_pred cceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeecccccccccee-e-ccCcceeEEEEcCCCCeEEEE
Q 010362 204 LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETF-M-MHDETVLCIEFSRDSEMLASG 281 (512)
Q Consensus 204 ~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~-~h~~~v~~l~~s~~~~~l~s~ 281 (512)
+.+++. +|.+.|++++|+|+ +||+|+.||+|++||+..+.... ...+ . +|...|.+++|+|++++|++|
T Consensus 6 ~~~~~~-~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~------~~~~~~~~h~~~v~~v~~sp~~~~las~ 76 (330)
T 2hes_X 6 LIKSLK-LYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTL------IDVLDETAHKKAIRSVAWRPHTSLLAAG 76 (330)
T ss_dssp EEEEEE-CCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEE------EEEECTTCCCSCEEEEEECTTSSEEEEE
T ss_pred cceeec-cCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEE------EEEEecCCccCCEEEEEECCCCCEEEEE
Confidence 445565 99999999999998 99999999999999998753211 1122 2 399999999999999999999
Q ss_pred eCCCeEEEEEccC-------CeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC----ceeEEeeCCccc
Q 010362 282 SQDGKIKVWRIRS-------GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG----KLLKEFRGHSSY 350 (512)
Q Consensus 282 ~~dg~i~vwd~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~----~~~~~~~~~~~~ 350 (512)
+.|++|++||+.. .+.+..+. +|...|.+++|+|++++|++|+.|++|++||++.. +++..+.+|...
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~ 155 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQD 155 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSC
T ss_pred eCCCcEEEEEcccCcCccccceeEEEEc-CCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCc
Confidence 9999999999853 34555565 89999999999999999999999999999999432 456788899999
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCC--ceeeecCCCCCCCCCCceeEEEEEcCCC-CCeEEEEcCCCcEEEEecC
Q 010362 351 VNDAIFTNDGSRVVTASSDCTVKVWDLKST--DCLQTFKPPPPLRGGDASVNSVHLFPKN-PDHIVVCNKTSSIYIMTLQ 427 (512)
Q Consensus 351 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~i~~~~~~ 427 (512)
|.+++|+|++.+|++++.|++|++||..++ ++...+ .+|...|.++.|+|++ ...+++++.|+.|++|++.
T Consensus 156 v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 156 VKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL------NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE------CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc------cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 999999999999999999999999998765 344444 3678899999999984 3679999999999999987
Q ss_pred CeE-------EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe--eEE-eccccCC-CeEEEEEcC--C
Q 010362 428 GQV-------VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK--LEH-LMKVHEK-DVIGVTHHP--H 494 (512)
Q Consensus 428 ~~~-------~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~--~~~-~~~~h~~-~v~~v~~~p--~ 494 (512)
... .........+...+.+++|++++ +|++++.||.|++||..+++ ... ...+|.. .|++++|+| +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~ 308 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNG 308 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC----
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCC
Confidence 420 11111112256789999999765 79999999999999998874 332 3457876 899999999 6
Q ss_pred CCeEEEEECCCeEEEecC
Q 010362 495 RNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 495 ~~~l~s~~~dg~i~iW~~ 512 (512)
+++|++|+.||+|++|+.
T Consensus 309 ~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 309 KTILATGGDDGIVNFWSL 326 (330)
T ss_dssp -CCEEEEETTSEEEEEEC
T ss_pred ceEEEEecCCCcEEEEEe
Confidence 899999999999999984
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.2e-43 Score=330.29 Aligned_cols=291 Identities=18% Similarity=0.274 Sum_probs=241.0
Q ss_pred ceEEEecCcCceEEEEE-----CC-CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeE
Q 010362 205 SHTIKFGTKSHAECARF-----SP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278 (512)
Q Consensus 205 ~~~~~~~h~~~v~~~~~-----s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l 278 (512)
...+. +|.+.|++++| ++ ++++|++|+.||+|++||+.+++..... ..+...+.+|...|.+++|+|++.++
T Consensus 14 ~~~l~-gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~-~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 14 RGILE-GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYF-GIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEE-CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBS-EEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeec-cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccccc-ccccchhccCCCceEEEEECCCCCEE
Confidence 34454 99999999999 77 9999999999999999998765422111 12334677899999999999999999
Q ss_pred EEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee---CCccceeEEE
Q 010362 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR---GHSSYVNDAI 355 (512)
Q Consensus 279 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~---~~~~~v~~~~ 355 (512)
++|+.|++|++||+.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||+. +....... .|...|.+++
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL-GECKFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESS-SCEEEECCTTTSCSSCEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc-CCceeeeecccCCCceeeeee
Confidence 999999999999999999988887 899999999999999999999999999999997 33333333 6888999999
Q ss_pred EcCCC----------CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEe
Q 010362 356 FTNDG----------SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 425 (512)
Q Consensus 356 ~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~ 425 (512)
|+|++ .++++++.||.|++||. .......+. +|...|.+++|+|++ .++++++.|+.|++||
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~------~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK------AHESNVNHLSISPNG-KYIATGGKDKKLLIWD 241 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE------CCSSCEEEEEECTTS-SEEEEEETTCEEEEEE
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc------CccccceEEEECCCC-CEEEEEcCCCeEEEEE
Confidence 99987 78999999999999994 344444433 577899999999988 8999999999999999
Q ss_pred cC-C-eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEE--ecc-----------ccCCCeEEEE
Q 010362 426 LQ-G-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH--LMK-----------VHEKDVIGVT 490 (512)
Q Consensus 426 ~~-~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~--~~~-----------~h~~~v~~v~ 490 (512)
+. . .....+. ....+.+++|+|++.++++| .|+.|++||+.+++... .+. +|...|++++
T Consensus 242 ~~~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 316 (343)
T 2xzm_R 242 ILNLTYPQREFD----AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLA 316 (343)
T ss_dssp SSCCSSCSEEEE----CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEE
T ss_pred CCCCcccceeec----CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEE
Confidence 94 2 2222222 23459999999999988755 57889999998776433 333 6788899999
Q ss_pred EcCCCCeEEEEECCCeEEEecC
Q 010362 491 HHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 491 ~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
|+|++++|++|+.||+|++|+.
T Consensus 317 ~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 317 WNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp ECSSSCCEEEEETTSEEEEEEE
T ss_pred ECCCCCeEEEecCCceEEEEEE
Confidence 9999999999999999999973
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.7e-42 Score=352.58 Aligned_cols=307 Identities=16% Similarity=0.226 Sum_probs=261.4
Q ss_pred cccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEc
Q 010362 193 KQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS 272 (512)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 272 (512)
...+|+.........+. +|...|++++|+|+|++||+|+.||+|+|||+.+++... ...+.+|..+|.+++|+
T Consensus 40 ~v~l~~~~~~~~~~~~~-~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~------~~~~~~~~~~v~~v~fs 112 (611)
T 1nr0_A 40 SVYTVPVGSLTDTEIYT-EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL------KTTIPVFSGPVKDISWD 112 (611)
T ss_dssp EEEEEETTCSSCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE------EEEEECSSSCEEEEEEC
T ss_pred EEEEecCCCcccCeEec-CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCccee------eEeecccCCceEEEEEC
Confidence 44567766566666665 999999999999999999999999999999987554221 12456699999999999
Q ss_pred CCCCeEEEEeCC----CeEEEEEccCCeeeEEeccccccCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCceeEEeeCC
Q 010362 273 RDSEMLASGSQD----GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS-QILSTSFDSTARIHGLKSGKLLKEFRGH 347 (512)
Q Consensus 273 ~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 347 (512)
|++++|++++.+ +.|++|| ++.....+. +|...|.+++|+|++. .|++|+.|++|++||..+++....+.+|
T Consensus 113 ~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~-gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H 189 (611)
T 1nr0_A 113 SESKRIAAVGEGRERFGHVFLFD--TGTSNGNLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH 189 (611)
T ss_dssp TTSCEEEEEECCSSCSEEEEETT--TCCBCBCCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC
T ss_pred CCCCEEEEEECCCCceeEEEEee--CCCCcceec-CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc
Confidence 999999998865 4677776 566666665 8999999999999987 5999999999999999999999999999
Q ss_pred ccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCC-CCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEec
Q 010362 348 SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426 (512)
Q Consensus 348 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~ 426 (512)
...|.+++|+|++++|++++.|++|++||+.+++....+.. .....+|...|.+++|+|++ ..+++++.|+.|++||+
T Consensus 190 ~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~ 268 (611)
T 1nr0_A 190 TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNV 268 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEET
T ss_pred cCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeC
Confidence 99999999999999999999999999999999988777632 22233688999999999988 89999999999999999
Q ss_pred C-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCC
Q 010362 427 Q-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 505 (512)
Q Consensus 427 ~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg 505 (512)
. +.....+............+.| ++..+++++.||.+++||..++++...+.+|...|++++|+|++++|++++.||
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 269 ATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp TTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCceeeeecCCCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 8 5555555544333344556666 788999999999999999999998889999999999999999999999999999
Q ss_pred eEEEecC
Q 010362 506 TMKLWKP 512 (512)
Q Consensus 506 ~i~iW~~ 512 (512)
+|++||.
T Consensus 347 ~v~~Wd~ 353 (611)
T 1nr0_A 347 HINSWDI 353 (611)
T ss_dssp CEEEEET
T ss_pred cEEEEEC
Confidence 9999984
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.9e-42 Score=346.62 Aligned_cols=293 Identities=30% Similarity=0.497 Sum_probs=258.3
Q ss_pred cccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEc
Q 010362 193 KQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS 272 (512)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 272 (512)
...+|+. +......+. +|...|++++|+|++++|++++.||+|++||....... .+.+|...|.+++|+
T Consensus 285 ~i~~w~~-~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~---------~~~~~~~~v~~~~~s 353 (577)
T 2ymu_A 285 TVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ---------TLTGHSSSVWGVAFS 353 (577)
T ss_dssp CEEEEET-TSCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE---------EECCCSSCEEEEEEC
T ss_pred EEEEEeC-CCcEEEEEe-cCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE---------EEeCCCCCEEEEEEC
Confidence 3445553 334444554 89999999999999999999999999999997654432 345699999999999
Q ss_pred CCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCcccee
Q 010362 273 RDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVN 352 (512)
Q Consensus 273 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~ 352 (512)
|++++|++++.||.|++||. +++.+..+. .|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|+
T Consensus 354 ~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~ 430 (577)
T 2ymu_A 354 PDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW 430 (577)
T ss_dssp TTSSEEEEEETTSEEEEEET-TCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCEEEEEcC-CCCEEEEec-CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeE
Confidence 99999999999999999995 577777776 79999999999999999999999999999995 6788899999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEE
Q 010362 353 DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432 (512)
Q Consensus 353 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~ 432 (512)
+++|+|++++|++++.|+.|++||.. ++....+. +|...+.+++|+|++ .++++++.|+.|++|+..++...
T Consensus 431 ~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~------~~~~~v~~~~~spd~-~~las~~~d~~i~iw~~~~~~~~ 502 (577)
T 2ymu_A 431 GVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLT------GHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRNGQLLQ 502 (577)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEE------CCSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSCEEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEc------CCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEcCCCCEEE
Confidence 99999999999999999999999964 55555543 567899999999987 89999999999999999888777
Q ss_pred EeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 433 SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 433 ~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
.+.. +...+.+++|+|+|++|++++.||.|++||. +++++..+.+|.+.|++++|+||+++|+|++.||+|++||
T Consensus 503 ~~~~---h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 503 TLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEC---CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEeC---CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 7765 4567999999999999999999999999995 6888999999999999999999999999999999999997
No 18
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.7e-41 Score=316.76 Aligned_cols=285 Identities=16% Similarity=0.263 Sum_probs=251.5
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
.+|...|++++|+|++++|++++ ||.|++||+.++.....+.. ....+|...|.+++|+|++++|++++.||.|++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ---LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEE---EECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeec---ccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 48999999999999999999999 99999999988764433221 011258899999999999999999999999999
Q ss_pred EEccCCe--eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEe
Q 010362 290 WRIRSGQ--CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 290 wd~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
||+.+++ ....+. .|...|.+++|+|+++++++++.||.|++||+++++.+..+..|...|.+++|+|+++++++++
T Consensus 124 ~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 124 WDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp EECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe
Confidence 9999887 445554 7888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEE
Q 010362 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447 (512)
Q Consensus 368 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (512)
.||.|++||+++++....+. +...+.+++|+|++ ..+++++.++.+++|++.......... +...+.++
T Consensus 203 ~dg~i~~~d~~~~~~~~~~~-------~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~v~~~ 271 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQLQQHD-------FTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPDKYQLHL---HESCVLSL 271 (337)
T ss_dssp TTSEEEEEETTTTEEEEEEE-------CSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSSCEEEECC---CSSCEEEE
T ss_pred cCCcEEEEECCCCceEeeec-------CCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCCeEEEcC---CccceeEE
Confidence 99999999999988777654 45679999999988 889999999999999999665544433 45679999
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 448 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 448 ~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
+|+|+++++++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++.||.|++|+
T Consensus 272 ~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 272 KFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 99999999999999999999999999887554 4888999999999999999999999999997
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.1e-41 Score=315.81 Aligned_cols=249 Identities=20% Similarity=0.326 Sum_probs=223.6
Q ss_pred ccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEe
Q 010362 255 ADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHG 334 (512)
Q Consensus 255 ~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d 334 (512)
...++.+|...|.+++|+|++++|++|+.||+|++||+.++..+..+. .|..+|.+++|+|++++|++|+.|+.|++||
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee-ccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 345678899999999999999999999999999999999999988887 7899999999999999999999999999999
Q ss_pred CCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee-eecCCCCCCCCCCceeEEEEEcCCCCCeEE
Q 010362 335 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL-QTFKPPPPLRGGDASVNSVHLFPKNPDHIV 413 (512)
Q Consensus 335 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 413 (512)
+.+++.+..+.+|...|.+++|+|++++|++|+.||+|++||++++... ..+ .+|...|.+++|+|.+...++
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~------~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF------EGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE------CCCCSCEEEEEECTTCTTEEE
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh------cccCCcEEEEEECCCCCCEEE
Confidence 9999999999999999999999999999999999999999999877433 333 357789999999998779999
Q ss_pred EEcCCCcEEEEecCC-eEEEEeeCCcccCCcEEEEEECC--CCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEE
Q 010362 414 VCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSP--KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT 490 (512)
Q Consensus 414 ~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~--~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~ 490 (512)
+++.|+.|++||+.. ......... +...+..++++| ++.++++|+.||.|++||+.+++++..+.+|...|.+++
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECC--CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEeCCCeEEEEECCCCCccceeccC--CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE
Confidence 999999999999973 333333322 234577888866 788999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEEECCCeEEEecC
Q 010362 491 HHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 491 ~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
|+|++++|++|+.||+|++||+
T Consensus 236 ~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 236 FHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEET
T ss_pred ECCCCCEEEEEcCCCeEEEEEC
Confidence 9999999999999999999984
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-41 Score=318.99 Aligned_cols=282 Identities=18% Similarity=0.310 Sum_probs=251.9
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
.+|.+.|++++|+|+|++|++|+.||.|++||+.+++.... +.+|...|.+++|+|++++|++++.||.|++
T Consensus 29 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~--------~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGT--------LDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEE--------ECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred EEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhh--------hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 39999999999999999999999999999999998876553 4459999999999999999999999999999
Q ss_pred EEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCC-----CcEEEEeCCCCc-----------eeEEeeCCcc--ce
Q 010362 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-----STARIHGLKSGK-----------LLKEFRGHSS--YV 351 (512)
Q Consensus 290 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~-----------~~~~~~~~~~--~v 351 (512)
||+.+++.+..+. +...+.+++|+|+++++++++.+ |.|++||+..+. ....+..|.. .+
T Consensus 101 wd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 101 WDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 9999999988886 78899999999999999999998 999999997653 3445555665 89
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCC-CceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-e
Q 010362 352 NDAIFTNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-Q 429 (512)
Q Consensus 352 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~ 429 (512)
.+++|+|+++++++++.||.|++||+++ ......+. .+...+.+++|+|++ ..+++++.++.|++||+.. .
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID------LHEKSISDMQFSPDL-TYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC
T ss_pred eEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe------cCCCceeEEEECCCC-CEEEEecCCceEEEEECCCCc
Confidence 9999999999999999999999999998 56665554 456789999999987 8899999999999999984 4
Q ss_pred EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCC--------------eEEEEEcCCCeeEEeccccCCCeEEEEEcCCC
Q 010362 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDR--------------NLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 495 (512)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg--------------~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~ 495 (512)
....+. ....+..++|+|+++++++++.++ .+++||..+++.+..+.+|...|++++|+|++
T Consensus 252 ~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 252 VLKKYE----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp EEEEEE----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred eeeeec----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCC
Confidence 444444 345689999999999999999888 89999999999999999999999999999999
Q ss_pred CeEEEEECCCeEEEecC
Q 010362 496 NLLATYGEDCTMKLWKP 512 (512)
Q Consensus 496 ~~l~s~~~dg~i~iW~~ 512 (512)
++|++++.||.|++|+.
T Consensus 328 ~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 328 TSYASGGEDGFIRLHHF 344 (369)
T ss_dssp SEEEEEETTSEEEEEEE
T ss_pred CEEEEEcCCCeEEEEEC
Confidence 99999999999999973
No 21
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.3e-40 Score=314.23 Aligned_cols=292 Identities=22% Similarity=0.342 Sum_probs=247.8
Q ss_pred cceEEEecCcCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe
Q 010362 204 LSHTIKFGTKSHAECARFSPD-GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282 (512)
Q Consensus 204 ~~~~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~ 282 (512)
+..+++ ||++.|++++|+|+ +++||||+.||+|+|||+.+++.... .+...+.+|...|.+++|+|++++|++++
T Consensus 30 l~~tL~-GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~---~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 30 LRGTLK-GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG---IPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp EEEEEC-CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE---EEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEC-CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc---eeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 444565 99999999999997 68999999999999999987653322 23346778999999999999999999999
Q ss_pred CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCcee-EEeeCCccceeEEEEcCCC-
Q 010362 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL-KEFRGHSSYVNDAIFTNDG- 360 (512)
Q Consensus 283 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~-~~~~~~~~~v~~~~~~~~~- 360 (512)
.|+.|++|+...+....... .+...+..+.+++++..|++|+.|+.+++||....... ....+|...+..++|++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 184 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred ccccceEEeecccceeeeec-CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence 99999999999988877776 67888999999999999999999999999998765443 3456788999999998764
Q ss_pred -CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeCCc
Q 010362 361 -SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSGK 438 (512)
Q Consensus 361 -~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~ 438 (512)
..+++++.|+.|++||+++++....+. +|...|.+++|+|++ .++++++.|+.|++||++.. .+..+..
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~------~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-- 255 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNHI------GHTGYLNTVTVSPDG-SLCASGGKDGQAMLWDLNEGKHLYTLDG-- 255 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEEEEEEEC--
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEec------CCCCcEEEEEECCCC-CEEEEEeCCCeEEEEEeccCceeeeecC--
Confidence 578899999999999999998877765 567899999999987 89999999999999999844 4444432
Q ss_pred ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEec---------cccCCCeEEEEEcCCCCeEEEEECCCeEEE
Q 010362 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM---------KVHEKDVIGVTHHPHRNLLATYGEDCTMKL 509 (512)
Q Consensus 439 ~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~---------~~h~~~v~~v~~~p~~~~l~s~~~dg~i~i 509 (512)
...+..++++|++.++ +++.|+.|++||+.++..+..+ .+|...|++++|+|++++|++|+.||.|+|
T Consensus 256 --~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 256 --GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp --SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred --CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 3468999999998765 5567999999999988776554 368889999999999999999999999999
Q ss_pred ecC
Q 010362 510 WKP 512 (512)
Q Consensus 510 W~~ 512 (512)
||.
T Consensus 333 W~~ 335 (340)
T 4aow_A 333 WQV 335 (340)
T ss_dssp EEE
T ss_pred EeC
Confidence 983
No 22
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-40 Score=343.22 Aligned_cols=289 Identities=23% Similarity=0.332 Sum_probs=244.3
Q ss_pred EEEecCcCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 207 TIKFGTKSHAECARFSPDG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 207 ~~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
.++ +|.+.|+|++|+|++ ++|++|+.||+|++||+.+..... ......+.+|...|.+++|+|++++|++|+.||
T Consensus 377 ~l~-~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~---~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 377 TMR-AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY---GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEE-CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS---CEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred hcc-cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc---ccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 344 999999999999864 799999999999999987653221 112345778999999999999999999999999
Q ss_pred eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEe---eCCccceeEEEEcCCC--
Q 010362 286 KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF---RGHSSYVNDAIFTNDG-- 360 (512)
Q Consensus 286 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~---~~~~~~v~~~~~~~~~-- 360 (512)
+|++||+.++.....+. +|...|.+++|+|++++|++|+.|++|++||.......... .+|...|.+++|+|++
T Consensus 453 ~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp EEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred cEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 99999999999988886 89999999999999999999999999999998654333222 4688899999999986
Q ss_pred CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeCCcc
Q 010362 361 SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSGKR 439 (512)
Q Consensus 361 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 439 (512)
..+++++.||+|++||+++++....+. +|...|.+++|+|++ .++++++.|+.|++||+... .+..+.
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~------~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~~~~~~~~---- 600 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLA------GHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGKKLYSLE---- 600 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTTTEEEECCB----
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEc------CCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCceEEEec----
Confidence 589999999999999999988777654 577899999999987 89999999999999999844 333332
Q ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccC-------------------CCeEEEEEcCCCCeEEE
Q 010362 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHE-------------------KDVIGVTHHPHRNLLAT 500 (512)
Q Consensus 440 ~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-------------------~~v~~v~~~p~~~~l~s 500 (512)
....+.+++|+|++.++++++ ++.|++||+.+++.+..+..+. ..+++++|+|++++|+|
T Consensus 601 ~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s 679 (694)
T 3dm0_A 601 ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS 679 (694)
T ss_dssp CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE
T ss_pred CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE
Confidence 245689999999999888776 5669999999998887665321 13789999999999999
Q ss_pred EECCCeEEEecC
Q 010362 501 YGEDCTMKLWKP 512 (512)
Q Consensus 501 ~~~dg~i~iW~~ 512 (512)
|+.||+|+||+.
T Consensus 680 gs~Dg~i~iW~i 691 (694)
T 3dm0_A 680 GYTDGVIRVWGI 691 (694)
T ss_dssp EETTSEEEEEEC
T ss_pred EcCCCeEEEEec
Confidence 999999999984
No 23
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-41 Score=324.13 Aligned_cols=301 Identities=16% Similarity=0.193 Sum_probs=248.9
Q ss_pred ceEEEecCcCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC----CC
Q 010362 205 SHTIKFGTKSHAECARFSPD----GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD----SE 276 (512)
Q Consensus 205 ~~~~~~~h~~~v~~~~~s~~----~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~----~~ 276 (512)
.+.+..+|.+.|++++|+|+ ...+++++.++.|++||+.+++....+... ....|...|.+++|+|+ +.
T Consensus 10 ~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~ 86 (366)
T 3k26_A 10 VNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSY---VDADADENFYTCAWTYDSNTSHP 86 (366)
T ss_dssp EEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEE---ECSCTTCCEEEEEEEECTTTCCE
T ss_pred EEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeec---cccCCCCcEEEEEeccCCCCCCC
Confidence 34566699999999999984 456666777889999999887665443321 11226788999999998 67
Q ss_pred eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeEEe---eCCcccee
Q 010362 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR-DGSQILSTSFDSTARIHGLKSGKLLKEF---RGHSSYVN 352 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~~~~~---~~~~~~v~ 352 (512)
+|++|+.||.|++||+.+++.+..+. .|...|.+++|+| ++.+|++|+.||.|++||+++++.+..+ .+|...|.
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 165 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCcee
Confidence 99999999999999999999988886 8999999999999 8999999999999999999999998888 68999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCC----------------------CCCCCCCCceeEEEEEcCCCCC
Q 010362 353 DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP----------------------PPPLRGGDASVNSVHLFPKNPD 410 (512)
Q Consensus 353 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------------------~~~~~~~~~~i~~~~~~~~~~~ 410 (512)
+++|+|++++|++++.||.|++||+++++....+.. ......+...|.++.|+ +.
T Consensus 166 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~ 242 (366)
T 3k26_A 166 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GD 242 (366)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TT
T ss_pred EEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CC
Confidence 999999999999999999999999998765443321 01112377889999998 37
Q ss_pred eEEEEcCCCcEEEEecCCeEE------------EEeeCCcccCCcEEEEEECCC--CCEEEEEeCCCeEEEEEcCCCee-
Q 010362 411 HIVVCNKTSSIYIMTLQGQVV------------KSFSSGKREGGDFVAACVSPK--GEWIYCVGEDRNLYCFSHQSGKL- 475 (512)
Q Consensus 411 ~l~~~~~~~~i~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~s~~--g~~l~~g~~dg~i~iwd~~~~~~- 475 (512)
.+++++.++.|++||+..... ........+...+.+++|+|+ +++|++|+.||.|++||+.++++
T Consensus 243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 999999999999999874211 112222223456888999999 99999999999999999998763
Q ss_pred ---EEecccc--CCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 476 ---EHLMKVH--EKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 476 ---~~~~~~h--~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
...+.+| ...|++++|+|++++|++++.||.|++||.
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 323 KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp GCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred cccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 3467777 789999999999999999999999999984
No 24
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.8e-41 Score=320.64 Aligned_cols=290 Identities=17% Similarity=0.235 Sum_probs=239.4
Q ss_pred cceEEEecCcCceEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcC-CCCeEEEE
Q 010362 204 LSHTIKFGTKSHAECARFSPDG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSR-DSEMLASG 281 (512)
Q Consensus 204 ~~~~~~~~h~~~v~~~~~s~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~ 281 (512)
....+. +|...|++++|+|++ ++|++|+.||.|+|||+.+++....+. ..+|...|.+++|+| ++++|+++
T Consensus 65 ~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 65 LHRTAS-PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ------GMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp EEEEEC-CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC------CCSTTCBEEEEEEETTEEEEEEEE
T ss_pred eEEecc-CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee------cCCcCCceeEEEeCCCCCCEEEEE
Confidence 334443 899999999999999 999999999999999998876554332 235999999999999 78999999
Q ss_pred eCCCeEEEEEccCCeeeEEecc--ccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCC
Q 010362 282 SQDGKIKVWRIRSGQCLRRLER--AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359 (512)
Q Consensus 282 ~~dg~i~vwd~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 359 (512)
+.||.|++||+.+ ..+..+.. .+...|.+++|+|++++|++|+.||.|++||+ +++.+..+.+|...|.+++|+|+
T Consensus 138 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 138 SIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp ETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSS
T ss_pred eCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCC
Confidence 9999999999986 44444432 23478999999999999999999999999999 68888999999999999999999
Q ss_pred CC-EEEEEeCCCcEEEEeCCC----CceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEE
Q 010362 360 GS-RVVTASSDCTVKVWDLKS----TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKS 433 (512)
Q Consensus 360 ~~-~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~ 433 (512)
++ ++++++.||.|++||+++ +.....+ ++...+.+++|+|.+...+++++.|+.|++||++. .....
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-------PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-------ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-------cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 99 999999999999999997 4444443 36779999999993338999999999999999973 22222
Q ss_pred eeCCc----c----------cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccc--cCCCeEEEEEcCCCCe
Q 010362 434 FSSGK----R----------EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV--HEKDVIGVTHHPHRNL 497 (512)
Q Consensus 434 ~~~~~----~----------~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~~p~~~~ 497 (512)
+.... . ....+..++++|+|++ +|+.||.|++||+.+++++..+.+ |...+.+++|+|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~ 366 (383)
T 3ei3_B 289 IIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDV 366 (383)
T ss_dssp EEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSE
T ss_pred cccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccE
Confidence 22111 0 1234556777777777 778999999999999999999987 4577888899999999
Q ss_pred EEEEECCCeEEEecC
Q 010362 498 LATYGEDCTMKLWKP 512 (512)
Q Consensus 498 l~s~~~dg~i~iW~~ 512 (512)
|++|+ ||.|++||+
T Consensus 367 l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 367 LASGM-GFNILIWNR 380 (383)
T ss_dssp EEEEE-TTEEEEEEC
T ss_pred EEEec-CCcEEEEec
Confidence 99997 999999985
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-39 Score=330.80 Aligned_cols=295 Identities=29% Similarity=0.491 Sum_probs=256.7
Q ss_pred ccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEE
Q 010362 192 MKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF 271 (512)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 271 (512)
....+|+. .......+. +|...|.+++|+|+++.|++++.|+.|++||... +... .+.+|...|.+++|
T Consensus 243 ~~i~~w~~-~~~~~~~~~-~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~~~--------~~~~h~~~v~~~~~ 311 (577)
T 2ymu_A 243 KTVKLWNR-NGQLLQTLT-GHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QLLQ--------TLTGHSSSVWGVAF 311 (577)
T ss_dssp SCEEEECT-TSCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEE--------EECCCSSCEEEEEE
T ss_pred CEEEEEeC-CCCEEEEEe-cCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cEEE--------EEecCCCCeEEEEE
Confidence 34455653 233444454 8999999999999999999999999999999643 3222 45569999999999
Q ss_pred cCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccce
Q 010362 272 SRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 351 (512)
Q Consensus 272 s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v 351 (512)
+|+++.|++++.||+|++||.... .+..+. .|...+.+++|+|+++++++++.||.|++||. +++.+..+.+|...|
T Consensus 312 ~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v 388 (577)
T 2ymu_A 312 SPDGQTIASASDDKTVKLWNRNGQ-HLQTLT-GHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 388 (577)
T ss_dssp CTTSSEEEEEETTSCEEEEETTSC-EEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCE
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCC-eeEEEe-CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCe
Confidence 999999999999999999997654 455565 78999999999999999999999999999995 678889999999999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEE
Q 010362 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 431 (512)
Q Consensus 352 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 431 (512)
++++|+|++++|++++.|+.|++||. +++....+. +|...+.+++|+|++ ..+++++.|+.+++|+..++..
T Consensus 389 ~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~------~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~~~~ 460 (577)
T 2ymu_A 389 RGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT------GHSSSVWGVAFSPDD-QTIASASDDKTVKLWNRNGQLL 460 (577)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEE------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSCEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEec------CCCCCeEEEEECCCC-CEEEEEcCCCEEEEEECCCCEE
Confidence 99999999999999999999999995 455555543 567899999999988 8999999999999999988877
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
..+.. +...+.+++|+|+|++|++++.|+.|++||. +++++..+.+|...|++++|+|++++|++++.||.|++||
T Consensus 461 ~~~~~---~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 461 QTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EEEEC---CSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEcC---CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 76655 3567999999999999999999999999994 7888999999999999999999999999999999999998
Q ss_pred C
Q 010362 512 P 512 (512)
Q Consensus 512 ~ 512 (512)
.
T Consensus 537 ~ 537 (577)
T 2ymu_A 537 R 537 (577)
T ss_dssp T
T ss_pred C
Confidence 3
No 26
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.4e-40 Score=319.56 Aligned_cols=293 Identities=17% Similarity=0.257 Sum_probs=249.8
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC----C---CeEEEEe
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD----S---EMLASGS 282 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~----~---~~l~s~~ 282 (512)
.+|.+.|++++|+| ++|++|+.||.|++||+.+++.... ......+.+|...|.+++|+|+ + ++|++++
T Consensus 13 ~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 13 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENP--KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCG--GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccC--CCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 38999999999999 7999999999999999988762221 1233456679999999999999 9 9999999
Q ss_pred CCCeEEEEEccCCee-----eEEecccc-----ccCeEEEEEe----cCCCE-EEEEeCCCcEEEEeCCC------Ccee
Q 010362 283 QDGKIKVWRIRSGQC-----LRRLERAH-----SEGVTSLVFS----RDGSQ-ILSTSFDSTARIHGLKS------GKLL 341 (512)
Q Consensus 283 ~dg~i~vwd~~~~~~-----~~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~dg~v~i~d~~~------~~~~ 341 (512)
.||.|++||+.+++. ...+. .| ...|.+++|+ |++++ |++++.||.|++||+++ ++.+
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred CCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 999999999998886 67765 66 5899999999 99999 99999999999999988 6666
Q ss_pred E-----Ee-------eCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCC---CceeEEEEEcC
Q 010362 342 K-----EF-------RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGG---DASVNSVHLFP 406 (512)
Q Consensus 342 ~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~ 406 (512)
. .+ ..|...|.+++|+|++ .+++++.||.|++||+++++....+... .+| ...+.+++|+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ---HSMINNSNSIRSVKFSP 243 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC---C---CCCCCEEEEEECS
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc---ccccccCCccceEEECC
Confidence 5 66 4488899999999999 9999999999999999998888777631 124 67899999999
Q ss_pred CCCCeEEEEcCC---CcEEEEecC-CeEEEEeeCCc----------ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q 010362 407 KNPDHIVVCNKT---SSIYIMTLQ-GQVVKSFSSGK----------REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 407 ~~~~~l~~~~~~---~~i~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~ 472 (512)
++ .++++++.+ +.|++||+. +.....+.... .+...+.+++|+|++++|++++.||.|++||+.+
T Consensus 244 ~~-~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 244 QG-SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp ST-TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CC-CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 87 889999999 999999998 44444444310 0467899999999999999999999999999999
Q ss_pred CeeEEecc------cc---------------CCCeEEEEEcCCC----------CeEEEEECCCeEEEecC
Q 010362 473 GKLEHLMK------VH---------------EKDVIGVTHHPHR----------NLLATYGEDCTMKLWKP 512 (512)
Q Consensus 473 ~~~~~~~~------~h---------------~~~v~~v~~~p~~----------~~l~s~~~dg~i~iW~~ 512 (512)
++++..+. +| ...|++++|+|++ ++|++++.||.|++|+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 99999998 78 9999999999998 79999999999999983
No 27
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-41 Score=329.36 Aligned_cols=293 Identities=16% Similarity=0.250 Sum_probs=252.8
Q ss_pred cCcCceEEEEECCCCC-EEEEE----------eCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEE
Q 010362 211 GTKSHAECARFSPDGQ-FLVSC----------SFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~-~l~sg----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~ 279 (512)
.+...|.+++|+|+|+ +|++| +.||.|+|||+.++.....+. . ..|...|.+++|+|++++|+
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~-----~-~~~~~~v~~~~~s~~~~~l~ 83 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIA-----S-LQVDSKFNDLDWSHNNKIIA 83 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSC-----C-CCCSSCEEEEEECSSSSCEE
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEE-----E-EecCCceEEEEECCCCCeEE
Confidence 4445789999999987 99999 889999999998876332111 1 23889999999999999999
Q ss_pred EEeCCCeEEEEEccC----CeeeEEeccccccCeEEEEEecC-CCEEEEEeCCCcEEEEeCCCCc------eeE---Eee
Q 010362 280 SGSQDGKIKVWRIRS----GQCLRRLERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGK------LLK---EFR 345 (512)
Q Consensus 280 s~~~dg~i~vwd~~~----~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~i~d~~~~~------~~~---~~~ 345 (512)
+++.||.|++||+.+ .+.+..+. .|...|.+++|+|+ +.+|++++.||.|++||+++++ ... ...
T Consensus 84 ~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2pm9_A 84 GALDNGSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM 162 (416)
T ss_dssp EEESSSCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC
T ss_pred EEccCCeEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc
Confidence 999999999999987 34666665 89999999999998 8999999999999999998876 333 236
Q ss_pred CCccceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC---cE
Q 010362 346 GHSSYVNDAIFTND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS---SI 421 (512)
Q Consensus 346 ~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~---~i 421 (512)
.|...|.+++|+|+ +.++++++.||.|++||+++++....+.......++...+.+++|+|++..++++++.++ .|
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 78899999999998 789999999999999999999988888766555556889999999999888999999998 99
Q ss_pred EEEecCCe--EEEEeeCCcccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCC-Ce
Q 010362 422 YIMTLQGQ--VVKSFSSGKREGGDFVAACVSP-KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR-NL 497 (512)
Q Consensus 422 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~-~~ 497 (512)
++||++.. ....+. ..+...+.+++|+| ++++|++++.||.|++||+.+++++..+.+|...|.+++|+|++ .+
T Consensus 243 ~~~d~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLN--QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp CEEETTSTTSCSBCCC--SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTE
T ss_pred EEEeCCCCCCCcEEee--cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCE
Confidence 99999843 222222 03467899999999 99999999999999999999999999999999999999999998 89
Q ss_pred EEEEECCCeEEEecC
Q 010362 498 LATYGEDCTMKLWKP 512 (512)
Q Consensus 498 l~s~~~dg~i~iW~~ 512 (512)
|++++.||.|++|+.
T Consensus 321 l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 321 FACASFDNKIEVQTL 335 (416)
T ss_dssp EEECCSSSEEEEEES
T ss_pred EEEEecCCcEEEEEc
Confidence 999999999999984
No 28
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=314.63 Aligned_cols=294 Identities=15% Similarity=0.219 Sum_probs=242.2
Q ss_pred cceEEEecCcCceEEEEECCCCCEE-EEEeC---CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC---CC
Q 010362 204 LSHTIKFGTKSHAECARFSPDGQFL-VSCSF---DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD---SE 276 (512)
Q Consensus 204 ~~~~~~~~h~~~v~~~~~s~~~~~l-~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~ 276 (512)
....+..+|...|.+++|+|++..+ ++|+. ||.|++||+.+++..... ..+|...|.+++|+|+ +.
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~~ 81 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLR-------EIEKAKPIKCGTFGATSLQQR 81 (357)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEE-------EEEESSCEEEEECTTCCTTTC
T ss_pred HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccccee-------eecccCcEEEEEEcCCCCCCc
Confidence 3344445899999999999999655 56665 999999999987654322 2258999999999998 69
Q ss_pred eEEEEeCCCeEEEEEccCCe-eeEEeccccccCeEEEEE------ecCCCEEEEEeCCCcEEEEeCCCCc-eeEEeeCCc
Q 010362 277 MLASGSQDGKIKVWRIRSGQ-CLRRLERAHSEGVTSLVF------SRDGSQILSTSFDSTARIHGLKSGK-LLKEFRGHS 348 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~dg~v~i~d~~~~~-~~~~~~~~~ 348 (512)
+|++|+.||.|++||+.+++ .+..+. .|...|.++.| +|++++|++++.||.|++||+++++ .+..+..|.
T Consensus 82 ~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 82 YLATGDFGGNLHIWNLEAPEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp CEEEEETTSCEEEECTTSCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred eEEEecCCCeEEEEeCCCCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 99999999999999999988 777776 89999999965 6789999999999999999999887 677776655
Q ss_pred c----ceeEEE----EcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCC--CCCeEEEEcCC
Q 010362 349 S----YVNDAI----FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK--NPDHIVVCNKT 418 (512)
Q Consensus 349 ~----~v~~~~----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~~ 418 (512)
+ .+.+++ |+|+++++++++.||.|++||+++++..... .+...+.++.|+|. ....+++++.+
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~l~~~~~d 233 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET-------NIKNGVCSLEFDRKDISMNKLVATSLE 233 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE-------ECSSCEEEEEESCSSSSCCEEEEEEST
T ss_pred CCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec-------CCCCceEEEEcCCCCCCCCEEEEECCC
Confidence 4 788888 6889999999999999999999998765443 35678999999993 34899999999
Q ss_pred CcEEEEecCCeE-EEEee--CCcccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC-------------------ee
Q 010362 419 SSIYIMTLQGQV-VKSFS--SGKREGGDFVAACVSPKGE-WIYCVGEDRNLYCFSHQSG-------------------KL 475 (512)
Q Consensus 419 ~~i~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~s~~g~-~l~~g~~dg~i~iwd~~~~-------------------~~ 475 (512)
+.|++||++... ...+. ....+...+.+++|+|+++ ++++|+.||.|++||+.++ +.
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL 313 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence 999999997432 11111 1123467899999999999 8999999999999999854 46
Q ss_pred EEeccccCCCeEEEEEcCCCCeEE-EEECCCeEEEecC
Q 010362 476 EHLMKVHEKDVIGVTHHPHRNLLA-TYGEDCTMKLWKP 512 (512)
Q Consensus 476 ~~~~~~h~~~v~~v~~~p~~~~l~-s~~~dg~i~iW~~ 512 (512)
+..+.+|...|++++|+|++++|+ +++.||.|++||.
T Consensus 314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 314 LQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred eeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 677888999999999999999998 8999999999983
No 29
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-39 Score=311.33 Aligned_cols=284 Identities=14% Similarity=0.180 Sum_probs=240.3
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVW 290 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vw 290 (512)
.|.+.|++++|+|++++|++|+.||.|++||+.+++.. ....+.+|...|.+++|+|++++|++++.||.|++|
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWV------QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEE------EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEE------eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 58999999999999999999999999999999887511 222455699999999999999999999999999999
Q ss_pred EccCCeeeEEec-cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCce---eEE-eeCCccceeEEEEcCCCCEEEE
Q 010362 291 RIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL---LKE-FRGHSSYVNDAIFTNDGSRVVT 365 (512)
Q Consensus 291 d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~---~~~-~~~~~~~v~~~~~~~~~~~l~~ 365 (512)
|+.+++...... ..|...|.+++|+|++++|++++.||.|++||++.+.. ... ...|...|.+++|+|+++++++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 999987554432 36889999999999999999999999999999988763 233 3568899999999999999999
Q ss_pred EeCCCcEEEEeCC------------------CCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC
Q 010362 366 ASSDCTVKVWDLK------------------STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 427 (512)
Q Consensus 366 ~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~ 427 (512)
++.||.|++||++ .++....+. .+...+.++.|+|++ ..+++++.|+.|++||++
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS------SSCGWVHGVCFSANG-SRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC------CCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGG
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecC------CCCCeEEEEEECCCC-CEEEEEeCCCEEEEEECC
Confidence 9999999999964 444444443 567899999999987 799999999999999997
Q ss_pred -CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC--Cee-----------------------------
Q 010362 428 -GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS--GKL----------------------------- 475 (512)
Q Consensus 428 -~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~--~~~----------------------------- 475 (512)
+.....+.. +...+.+++|+|++.++++| .||.|++|++.+ ++.
T Consensus 233 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
T 1k8k_C 233 KKMAVATLAS---ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK 308 (372)
T ss_dssp GTTEEEEEEC---SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCC
T ss_pred CCceeEEEcc---CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccc
Confidence 555555543 34579999999999998888 899999999988 431
Q ss_pred ---E------Eec-cccCCCeEEEEEc-CCC---CeEEEEECCCeEEEec
Q 010362 476 ---E------HLM-KVHEKDVIGVTHH-PHR---NLLATYGEDCTMKLWK 511 (512)
Q Consensus 476 ---~------~~~-~~h~~~v~~v~~~-p~~---~~l~s~~~dg~i~iW~ 511 (512)
. ..+ .+|.+.|++++|+ +++ .+|+||+.||.|++||
T Consensus 309 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 309 ASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp C---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred cccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 0 223 4899999999977 566 9999999999999997
No 30
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-40 Score=318.83 Aligned_cols=279 Identities=15% Similarity=0.266 Sum_probs=246.8
Q ss_pred CcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEE
Q 010362 212 TKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR 291 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd 291 (512)
|.+.|++++|+|++++|++|+.||.|++|| .+++... .+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~--------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLN--------VLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEE--------EECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeee--------eccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 788999999999999999999999999999 4444433 3445999999999999999999999999999999
Q ss_pred ccCCeeeEEeccccccC---------------eEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEE
Q 010362 292 IRSGQCLRRLERAHSEG---------------VTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIF 356 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~---------------i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~ 356 (512)
+.+++.+..+. .+... +.+++|+|++ .+++++.||.|++||+++++.+..+..|...|.+++|
T Consensus 178 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~ 255 (425)
T 1r5m_A 178 VISGTVMQHFE-LKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEF 255 (425)
T ss_dssp TTTTEEEEEEC-CC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEE
T ss_pred CCCCcEEEEee-ccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEE
Confidence 99999888876 55555 9999999975 6889999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEee
Q 010362 357 TNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFS 435 (512)
Q Consensus 357 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~ 435 (512)
+|++++|++++.||.|++||+++++....+. .+...+.++.|+|++ .+++++.++.+++||+. +.....+.
T Consensus 256 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~ 327 (425)
T 1r5m_A 256 NDTNKLLLSASDDGTLRIWHGGNGNSQNCFY------GHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSI 327 (425)
T ss_dssp ETTTTEEEEEETTSCEEEECSSSBSCSEEEC------CCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCccceEec------CCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecc
Confidence 9999999999999999999999987776664 466789999999987 99999999999999998 44444444
Q ss_pred CCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe--------------------eEEeccccCC--CeEEEEEcC
Q 010362 436 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK--------------------LEHLMKVHEK--DVIGVTHHP 493 (512)
Q Consensus 436 ~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~--------------------~~~~~~~h~~--~v~~v~~~p 493 (512)
. +...+.+++|+|++++|++++.||.|++||+.+++ ++..+.+|.. .|++++|+|
T Consensus 328 ~---~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 328 V---DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp C---TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT
T ss_pred c---CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC
Confidence 3 34679999999999999999999999999999888 8889999976 999999999
Q ss_pred CCCeEEEEECCCeEEEecC
Q 010362 494 HRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 494 ~~~~l~s~~~dg~i~iW~~ 512 (512)
++++|++++.||.|++|+.
T Consensus 405 ~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 405 AGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp TSSEEEEEESSSCCEEEEC
T ss_pred CCceEEEEecCceEEEEee
Confidence 9999999999999999984
No 31
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.4e-40 Score=316.65 Aligned_cols=244 Identities=21% Similarity=0.402 Sum_probs=225.3
Q ss_pred eeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC
Q 010362 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 337 (512)
.+.+|..+|++++|+|++.+|++|+.||+|++||+.+++....+. +|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~-~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 456799999999999999999999999999999999999988887 8999999999999999999999999999999999
Q ss_pred CceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC
Q 010362 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417 (512)
Q Consensus 338 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 417 (512)
++++..+.+|...|.+++|+|+++++++|+.|++|++||++++.+...+. +|...+.++.++|++ .++++++.
T Consensus 182 ~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~------~h~~~v~~~~~~~~g-~~l~s~s~ 254 (410)
T 1vyh_C 182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT------GHREWVRMVRPNQDG-TLIASCSN 254 (410)
T ss_dssp SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE------CCSSCEEEEEECTTS-SEEEEEET
T ss_pred CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe------CCCccEEEEEECCCC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999998887765 567789999999987 89999999
Q ss_pred CCcEEEEecCCe-EEEEeeCCcccCCcEEEEEECCC--------------------CCEEEEEeCCCeEEEEEcCCCeeE
Q 010362 418 TSSIYIMTLQGQ-VVKSFSSGKREGGDFVAACVSPK--------------------GEWIYCVGEDRNLYCFSHQSGKLE 476 (512)
Q Consensus 418 ~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~--------------------g~~l~~g~~dg~i~iwd~~~~~~~ 476 (512)
|+.|++||+... ....+.. +...+.+++|+|+ |.++++|+.||.|++||+.++.++
T Consensus 255 D~~v~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELRE---HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp TSCEEEEETTTCCEEEEECC---CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCceeeEecC---CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 999999999854 3333332 4567999999996 679999999999999999999999
Q ss_pred EeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 477 ~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
..+.+|.+.|++++|+|++++|++|+.||+|++||.
T Consensus 332 ~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 999999999999999999999999999999999984
No 32
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-40 Score=322.25 Aligned_cols=303 Identities=15% Similarity=0.214 Sum_probs=247.0
Q ss_pred CccccceEEEecCcCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeE
Q 010362 200 YPTTLSHTIKFGTKSHAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML 278 (512)
Q Consensus 200 ~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l 278 (512)
........+..+|.+.|++++|+| ++++||+|+.||+|+|||+.+.+..... .....+ +|...|.+++|+|++++|
T Consensus 50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~--~~~~~~-~h~~~v~~~~~~~~~~~l 126 (437)
T 3gre_A 50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY--SSSLTY-DCSSTVTQITMIPNFDAF 126 (437)
T ss_dssp CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC--SCSEEE-ECSSCEEEEEECTTSSEE
T ss_pred ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc--ceeeec-cCCCCEEEEEEeCCCCEE
Confidence 334566667558999999999999 9999999999999999998762111101 111122 499999999999999999
Q ss_pred EEEeCCCeEEEEEcc---CCeeeEEec--------c-c--cccCeEEEE--EecCCCEEEEEeCCCcEEEEeCCCCceeE
Q 010362 279 ASGSQDGKIKVWRIR---SGQCLRRLE--------R-A--HSEGVTSLV--FSRDGSQILSTSFDSTARIHGLKSGKLLK 342 (512)
Q Consensus 279 ~s~~~dg~i~vwd~~---~~~~~~~~~--------~-~--~~~~i~~~~--~~~~~~~l~~~~~dg~v~i~d~~~~~~~~ 342 (512)
++|+.||+|++||+. +++...... . . +...+.++. +++++.++++|+.||.|++||+++++.+.
T Consensus 127 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 206 (437)
T 3gre_A 127 AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ 206 (437)
T ss_dssp EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE
Confidence 999999999999995 554433222 1 1 455677777 55789999999999999999999999999
Q ss_pred EeeC--CccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCC---CCCeEEEEcC
Q 010362 343 EFRG--HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK---NPDHIVVCNK 417 (512)
Q Consensus 343 ~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~ 417 (512)
.+.+ |...|++++|+|++++|++|+.||.|++||+++++....+.. .+..+|.++.++|. +..++++++.
T Consensus 207 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~s~~~~~l~s~~~ 281 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF-----GDHAPITHVEVCQFYGKNSVIVVGGSS 281 (437)
T ss_dssp EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC-----TTCEEEEEEEECTTTCTTEEEEEEEST
T ss_pred EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec-----CCCCceEEEEeccccCCCccEEEEEcC
Confidence 9988 889999999999999999999999999999999988877653 34568999988764 3368999999
Q ss_pred CCcEEEEecC-CeEEEEeeCCc-----------------------ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Q 010362 418 TSSIYIMTLQ-GQVVKSFSSGK-----------------------REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG 473 (512)
Q Consensus 418 ~~~i~~~~~~-~~~~~~~~~~~-----------------------~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~ 473 (512)
|+.|++||++ +.....+.... .+...+.+++|+ ++++|++|+.||.|++||+.++
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 9999999998 55555554321 144568889999 8899999999999999999998
Q ss_pred eeEEeccc-------------------------------------cCCCeEEEEEcCC--CCeEEEEECCCeEEEec
Q 010362 474 KLEHLMKV-------------------------------------HEKDVIGVTHHPH--RNLLATYGEDCTMKLWK 511 (512)
Q Consensus 474 ~~~~~~~~-------------------------------------h~~~v~~v~~~p~--~~~l~s~~~dg~i~iW~ 511 (512)
+....+.+ |.+.|++++|+++ +.+|++|+.||.|+||+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 361 SSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp GGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 87766654 8899999999998 77999999999999996
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-40 Score=323.18 Aligned_cols=290 Identities=16% Similarity=0.189 Sum_probs=232.0
Q ss_pred cCcCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcC-CCCeEEEEeCCCeEE
Q 010362 211 GTKSHAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIK 288 (512)
Q Consensus 211 ~h~~~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~ 288 (512)
+|...|+|++|+| ++++||+|+.||+|+|||+.+++....+ .+.+|...|++++|+| ++++|++|+.||+|+
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~------~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI------KGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE------CCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE------EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 7899999999999 5679999999999999999877543322 3456999999999998 688999999999999
Q ss_pred EEEccCCeeeEEec-cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCC-EEEEE
Q 010362 289 VWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGS-RVVTA 366 (512)
Q Consensus 289 vwd~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 366 (512)
+||++++....... ..+...+.+++|+|++.+|++|+.||.|++||++ ++.+..+.+|...|++++|+|++. +++++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEe
Confidence 99998765433332 1234567899999999999999999999999985 566778889999999999999876 78899
Q ss_pred eCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCcc---cCC
Q 010362 367 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKR---EGG 442 (512)
Q Consensus 367 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~---~~~ 442 (512)
+.|+.|++||+++.+....+. ...+|...|.+++|+|++ .++++++.|+.|++||+.. .....+..... ...
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~---~~~~h~~~v~~~~~spdg-~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 345 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFL---YSLPHRHPVNAACFSPDG-ARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHL 345 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCS---BCCBCSSCEEECCBCTTS-SEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSS
T ss_pred cCcceeeEEecccccccceEE---EeeeccccccceeECCCC-CeeEEEcCCCEEEEEECCCCccceEEecccccccccc
Confidence 999999999999876544432 223678899999999987 8999999999999999983 33333322211 111
Q ss_pred cEEEEEECCCCCEEEEEe------------CCCeEEEEEcCCCeeEEecc-ccCCCeEEE-EEcCCCCeEEEEECCCeEE
Q 010362 443 DFVAACVSPKGEWIYCVG------------EDRNLYCFSHQSGKLEHLMK-VHEKDVIGV-THHPHRNLLATYGEDCTMK 508 (512)
Q Consensus 443 ~~~~~~~s~~g~~l~~g~------------~dg~i~iwd~~~~~~~~~~~-~h~~~v~~v-~~~p~~~~l~s~~~dg~i~ 508 (512)
......|+|++.++++++ .++.|++||..+++.+..+. +|...|.++ +|+|++.+|++|+ |++|+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~ 424 (435)
T 4e54_B 346 TPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHIL 424 (435)
T ss_dssp CCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEE
T ss_pred eeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEE
Confidence 233456777777766664 34579999999999887764 678888887 6999999999876 88999
Q ss_pred EecC
Q 010362 509 LWKP 512 (512)
Q Consensus 509 iW~~ 512 (512)
||++
T Consensus 425 iW~~ 428 (435)
T 4e54_B 425 IWSQ 428 (435)
T ss_dssp ECCC
T ss_pred EEEC
Confidence 9985
No 34
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=304.07 Aligned_cols=251 Identities=18% Similarity=0.169 Sum_probs=214.1
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
..|...|.+++|+|++ .|++|+.||+|+|||+.+++...... ....+|...|++++|+|++++|++|+.||+|++
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~----~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~i 153 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSK----FCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKV 153 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEE----EEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEee----ccccCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 4678889999999985 68899999999999999887554332 245579999999999999999999999999999
Q ss_pred EEccCCeeeEEeccccccCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCceeEEee--CCccceeEEEEcC-CCCEEEE
Q 010362 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGS-QILSTSFDSTARIHGLKSGKLLKEFR--GHSSYVNDAIFTN-DGSRVVT 365 (512)
Q Consensus 290 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~ 365 (512)
||+.+++.+..+. +|...|.+++|+|++. +|++|+.|++|++||+++++....+. .|...+.+++|+| +++++++
T Consensus 154 wd~~~~~~~~~~~-~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 154 WDLAQQVVLSSYR-AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp EETTTTEEEEEEC-CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEE
T ss_pred EECCCCcEEEEEc-CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEE
Confidence 9999999999987 8999999999999874 78999999999999999999888774 3556799999999 4568899
Q ss_pred EeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEE
Q 010362 366 ASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFV 445 (512)
Q Consensus 366 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 445 (512)
|+.||+|++||+++++++..+. +|...|++++|+|++..++++++.|+.|++||.....+..+. .|...|.
T Consensus 233 g~~dg~v~~wd~~~~~~~~~~~------~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~---~H~~~V~ 303 (344)
T 4gqb_B 233 GDENGTVSLVDTKSTSCVLSSA------VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQ---AHRDFVR 303 (344)
T ss_dssp EETTSEEEEEESCC--CCEEEE------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEEC---CCSSCEE
T ss_pred eccCCcEEEEECCCCcEEEEEc------CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEc---CCCCCEE
Confidence 9999999999999998877765 577899999999998889999999999999999966555443 3567899
Q ss_pred EEEECCCCC-EEEEEeCCCeEEEEEcCCCee
Q 010362 446 AACVSPKGE-WIYCVGEDRNLYCFSHQSGKL 475 (512)
Q Consensus 446 ~~~~s~~g~-~l~~g~~dg~i~iwd~~~~~~ 475 (512)
+++|+|++. +|++|+.||.|++|++.+..+
T Consensus 304 ~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 304 DATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 999999986 567899999999999987543
No 35
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=9.3e-39 Score=310.45 Aligned_cols=281 Identities=18% Similarity=0.278 Sum_probs=241.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccC
Q 010362 215 HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS 294 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~ 294 (512)
..++++||++ ++||+|. |++|+|||..+++....+. +.+|...|++++|+|+|++|++|+.||+|++||+.+
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~------~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQ------MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEE------CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEE------ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC
Confidence 4678999986 5888876 9999999999998765443 335888999999999999999999999999999999
Q ss_pred CeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-ceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEE
Q 010362 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373 (512)
Q Consensus 295 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 373 (512)
++.+..+. +|...+.+++++ +..+++|+.|+.+++||.... ..+..+.+|...+..+.|+|+++++++++.||.++
T Consensus 179 ~~~~~~~~-~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 179 QKRLRNMT-SHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp TEEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CcEEEEEe-CCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccce
Confidence 99999887 899999988875 679999999999999998765 45678899999999999999999999999999999
Q ss_pred EEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEE--cCCCcEEEEecCC-eEEEEeeCCcccCCcEEEEEEC
Q 010362 374 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVC--NKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVS 450 (512)
Q Consensus 374 iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~--~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s 450 (512)
+||..+++..... ......+...|.+++|+|.+..+++++ +.|+.|++||+.. .....+.. ...+.++.|+
T Consensus 256 i~~~~~~~~~~~~--~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~----~~~v~~~~~~ 329 (420)
T 4gga_A 256 VWPSAPGEGGWVP--LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA----HSQVCSILWS 329 (420)
T ss_dssp EEESSCCSSCSCC--SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC----SSCEEEEEEE
T ss_pred EEeecccccccee--eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc----ccceeeeeec
Confidence 9999877532211 112235778999999999998888764 5789999999984 44444433 3468899999
Q ss_pred CCCCEEEEEe--CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 451 PKGEWIYCVG--EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 451 ~~g~~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
|+++.+++++ .||.|++||+.+++++..+.+|.+.|++++|+|++.+|+|||.||+|+|||.
T Consensus 330 ~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 330 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp TTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 9999998765 7999999999999999999999999999999999999999999999999984
No 36
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=300.57 Aligned_cols=268 Identities=24% Similarity=0.366 Sum_probs=235.4
Q ss_pred eeccCcccccccccccCccccc--eEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeec
Q 010362 184 DLFRGTAAMKQDVEDMYPTTLS--HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261 (512)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 261 (512)
.++.+..+....+|+....... ..+ .+|...|.+++|+|++.++++|+.||+|++||+.+++....+ ..
T Consensus 50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l-~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~--------~~ 120 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDERLDLQWSL-EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSI--------DA 120 (321)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE--------EC
T ss_pred EEEEEcCCCCEEEEECCCCCeeeeeee-ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEE--------eC
Confidence 3455556666778876655432 234 499999999999999999999999999999999998766543 34
Q ss_pred cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCcee
Q 010362 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 341 (512)
|...+.+++|+|++++|++|+.||.|++||+.+++....+. .+...|.+++|+|++++|++|+.||.|++||+++++.+
T Consensus 121 ~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~ 199 (321)
T 3ow8_A 121 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 199 (321)
T ss_dssp CTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 78889999999999999999999999999999999888876 78889999999999999999999999999999999999
Q ss_pred EEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcE
Q 010362 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421 (512)
Q Consensus 342 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i 421 (512)
..+.+|..+|.+++|+|++++|++++.||.|++||++++.....+. +|...|.+++|+|++ ..+++++.|+.|
T Consensus 200 ~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~------~h~~~v~~~~~sp~~-~~l~s~s~D~~v 272 (321)
T 3ow8_A 200 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS------GHASWVLNVAFCPDD-THFVSSSSDKSV 272 (321)
T ss_dssp EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc------CCCCceEEEEECCCC-CEEEEEeCCCcE
Confidence 9999999999999999999999999999999999999988777654 577899999999987 789999999999
Q ss_pred EEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Q 010362 422 YIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 422 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~ 471 (512)
++||+. +..+..+.. +...+.+++|+|+|++|++++.||.|++||..
T Consensus 273 ~iwd~~~~~~~~~~~~---h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 273 KVWDVGTRTCVHTFFD---HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEeCCCCEEEEEEcC---CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999998 445555443 45679999999999999999999999999963
No 37
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=295.91 Aligned_cols=281 Identities=19% Similarity=0.269 Sum_probs=238.0
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC
Q 010362 216 AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG 295 (512)
Q Consensus 216 v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~ 295 (512)
..+|+||+++ +||+|. |++|+|||+.+++....+. +.+|...|++++|+|++++|++|+.||+|++||+.++
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~------~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQ------MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEE------CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEE------ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 5789999986 777775 9999999999998776543 3358889999999999999999999999999999999
Q ss_pred eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-ceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEE
Q 010362 296 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374 (512)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 374 (512)
+.+..+. +|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+..+.+.++++++++++.||.|++
T Consensus 100 ~~~~~~~-~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 176 (318)
T 4ggc_A 100 KRLRNMT-SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV 176 (318)
T ss_dssp EEEEEEE-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeEEEec-CccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeE
Confidence 9999887 78888877655 5679999999999999998776 456778899999999999999999999999999999
Q ss_pred EeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEE--EEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCC
Q 010362 375 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV--VCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPK 452 (512)
Q Consensus 375 wd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 452 (512)
||+++++...... .....+...+.++.++|.+...+. +++.++.|++|+........... +...+..++++|+
T Consensus 177 wd~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~---~~~~v~~~~~~~~ 251 (318)
T 4ggc_A 177 WPSAPGEGGWVPL--QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD---AHSQVCSILWSPH 251 (318)
T ss_dssp EESSCBTTBSCCS--EEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE---CSSCEEEEEEETT
T ss_pred EECCCCcccccce--eeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc---ceeeeeeeeeccc
Confidence 9999876433221 112346678999999999877664 55678999999998554443333 2456889999999
Q ss_pred CCEEEEEe--CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 453 GEWIYCVG--EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 453 g~~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+..+++++ .||.|++||+.+++++..+.+|.+.|++++|+|++++|+|||.||+|+|||.
T Consensus 252 ~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 252 YKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp TTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 99888765 7999999999999999999999999999999999999999999999999984
No 38
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.5e-40 Score=311.19 Aligned_cols=291 Identities=13% Similarity=0.145 Sum_probs=224.2
Q ss_pred CcCceEEEEECCCCCEEEEEeCCC-------eEEEEEcCCCeeeccc--cccccceeeccCcceeEEEEcCCCCeEEEE-
Q 010362 212 TKSHAECARFSPDGQFLVSCSFDG-------FIEVWDYLSGKLKKDL--QYQADETFMMHDETVLCIEFSRDSEMLASG- 281 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~sg~~dg-------~i~iwd~~~~~~~~~~--~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~- 281 (512)
-..+|.|++|+|||++|++|+.|. .|++|++..+...... .......+.+|...|.++++++ +.+++|
T Consensus 13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~--~~~~~g~ 90 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK--GIILVGC 90 (365)
T ss_dssp CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET--TEEEEEC
T ss_pred CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC--CEEEEEE
Confidence 345899999999999999997543 5999998765433221 1112224567888899888764 456654
Q ss_pred ----------eCCCeEEEEEccCCeeeEEec--------cccccCeEEEEEecCCCEEEEEe--CCCcEEEEeCCCCcee
Q 010362 282 ----------SQDGKIKVWRIRSGQCLRRLE--------RAHSEGVTSLVFSRDGSQILSTS--FDSTARIHGLKSGKLL 341 (512)
Q Consensus 282 ----------~~dg~i~vwd~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~l~~~~--~dg~v~i~d~~~~~~~ 341 (512)
+.|+.+++|++.++....... ..+...+.+++|+|||+++++++ .|++|++||+++++.+
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 457889999987653221111 12345688999999999987654 6899999999999998
Q ss_pred EEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC--
Q 010362 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS-- 419 (512)
Q Consensus 342 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~-- 419 (512)
..+. |...|.+++|+|+|+++++++.+ .+.+|+..++........ ..+...+.+++|+|++ ..+++++.++
T Consensus 171 ~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~----~~~~~~v~~v~fspdg-~~l~~~s~d~~~ 243 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTD----FDKNWSLSKINFIADD-TVLIAASLKKGK 243 (365)
T ss_dssp EEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECC----CCTTEEEEEEEEEETT-EEEEEEEESSSC
T ss_pred EEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeec----CCCCCCEEEEEEcCCC-CEEEEEecCCcc
Confidence 8886 67789999999999999998855 577777777765543321 3467889999999998 6777777665
Q ss_pred --cEEEEecCCeEEE--EeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEe-ccccCCCeEEEEEcCC
Q 010362 420 --SIYIMTLQGQVVK--SFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL-MKVHEKDVIGVTHHPH 494 (512)
Q Consensus 420 --~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~v~~~p~ 494 (512)
.++.|+....... .......+...|.+++|+|||++|++|+.|+.|+|||+.+++++.. +.+|...|++|+|+||
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPD 323 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTT
T ss_pred eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCC
Confidence 5788887643222 1222233456799999999999999999999999999999999887 5799999999999999
Q ss_pred CCeEEEEECCCeEEEec
Q 010362 495 RNLLATYGEDCTMKLWK 511 (512)
Q Consensus 495 ~~~l~s~~~dg~i~iW~ 511 (512)
+++|||||.|++|+||+
T Consensus 324 g~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 324 STYVASVSAANTIHIIK 340 (365)
T ss_dssp SCEEEEEETTSEEEEEE
T ss_pred CCEEEEEeCCCeEEEEE
Confidence 99999999999999998
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-39 Score=311.04 Aligned_cols=280 Identities=21% Similarity=0.331 Sum_probs=241.8
Q ss_pred cCcCc--eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEE
Q 010362 211 GTKSH--AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 288 (512)
Q Consensus 211 ~h~~~--v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~ 288 (512)
+|... +.+++|++ ..+++++.||.|++||+.+++....+.. .|...|.+++|+|++++|++|+.||.|+
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~-------~~~~~v~~v~~s~~~~~l~~~~~dg~i~ 159 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAET-------DESTYVASVKWSHDGSFLSVGLGNGLVD 159 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEEC-------CTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeec-------CCCCCEEEEEECCCCCEEEEECCCCeEE
Confidence 45444 44566665 4577888999999999999876554332 2789999999999999999999999999
Q ss_pred EEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCC-CCceeEEeeCCccceeEEEEcCCCCEEEEEe
Q 010362 289 VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK-SGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 289 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
+||+.+++.+..+. .|...|.+++|+ ++.+++|+.||.|++||++ .+..+..+.+|...|.+++|+|++++|++++
T Consensus 160 iwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 236 (401)
T 4aez_A 160 IYDVESQTKLRTMA-GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG 236 (401)
T ss_dssp EEETTTCCEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEECcCCeEEEEec-CCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 99999999998887 899999999994 6799999999999999998 5677888999999999999999999999999
Q ss_pred CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc--CCCcEEEEecC-CeEEEEeeCCcccCCcE
Q 010362 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN--KTSSIYIMTLQ-GQVVKSFSSGKREGGDF 444 (512)
Q Consensus 368 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~~~~i~~~~~~-~~~~~~~~~~~~~~~~~ 444 (512)
.||.|++||++++.....+. .+...+.+++|+|++..++++++ .|+.+++||+. +.....+. +...+
T Consensus 237 ~d~~v~iwd~~~~~~~~~~~------~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~----~~~~v 306 (401)
T 4aez_A 237 NDNVVQIWDARSSIPKFTKT------NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD----AGSQV 306 (401)
T ss_dssp TTSCEEEEETTCSSEEEEEC------CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE----CSSCE
T ss_pred CCCeEEEccCCCCCccEEec------CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe----CCCcE
Confidence 99999999999988777664 46778999999999888888876 79999999998 44444443 24569
Q ss_pred EEEEECCCCCEEEEE--eCCCeEEEEEcCCCeeEEe--ccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 445 VAACVSPKGEWIYCV--GEDRNLYCFSHQSGKLEHL--MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 445 ~~~~~s~~g~~l~~g--~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.+++|+|++++++++ +.||.|++||+.+++.... +.+|...|.+++|+|++.+|++++.||.|++|+.
T Consensus 307 ~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 307 TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 999999999999994 4899999999999765544 6789999999999999999999999999999984
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-40 Score=321.44 Aligned_cols=312 Identities=14% Similarity=0.217 Sum_probs=252.9
Q ss_pred cccccccccccCccccc-eEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCccee
Q 010362 189 TAAMKQDVEDMYPTTLS-HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267 (512)
Q Consensus 189 ~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~ 267 (512)
..+....+|+....... ......|...|.+++|+|++++|++|+.||.|++||+.+..... .....+.+|...|.
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~----~~~~~~~~h~~~v~ 117 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAI----NSMARFSNHSSSVK 117 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCC----CEEEECCCSSSCCC
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccc----cchhhccCCccceE
Confidence 34456677777655422 11223789999999999999999999999999999998721110 12234556999999
Q ss_pred EEEEcCC-CCeEEEEeCCCeEEEEEccCCe------eeEEe--ccccccCeEEEEEecC-CCEEEEEeCCCcEEEEeCCC
Q 010362 268 CIEFSRD-SEMLASGSQDGKIKVWRIRSGQ------CLRRL--ERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 268 ~l~~s~~-~~~l~s~~~dg~i~vwd~~~~~------~~~~~--~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~i~d~~~ 337 (512)
+++|+|+ +++|++++.||.|++||+.+++ ..... ...|...|.+++|+|+ +.++++++.||.|++||+++
T Consensus 118 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 118 TVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA 197 (416)
T ss_dssp EEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT
T ss_pred EEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC
Confidence 9999998 8999999999999999999876 33222 2368899999999998 78999999999999999999
Q ss_pred CceeEEeeCC------ccceeEEEEcCCC-CEEEEEeCCC---cEEEEeCCCCc-eeeecCCCCCCCCCCceeEEEEEcC
Q 010362 338 GKLLKEFRGH------SSYVNDAIFTNDG-SRVVTASSDC---TVKVWDLKSTD-CLQTFKPPPPLRGGDASVNSVHLFP 406 (512)
Q Consensus 338 ~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~dg---~i~iwd~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~ 406 (512)
++.+..+..+ ...|.+++|+|++ .++++++.|+ .|++||++++. ....+. .+|...+.+++|+|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~v~~~~~s~ 272 (416)
T 2pm9_A 198 KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLN-----QGHQKGILSLDWCH 272 (416)
T ss_dssp TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCC-----SCCSSCEEEEEECS
T ss_pred CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEee-----cCccCceeEEEeCC
Confidence 9999888876 7889999999997 6899999998 99999999863 333322 15778999999999
Q ss_pred CCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeeEEecc----
Q 010362 407 KNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKG-EWIYCVGEDRNLYCFSHQSGKLEHLMK---- 480 (512)
Q Consensus 407 ~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~dg~i~iwd~~~~~~~~~~~---- 480 (512)
.+..++++++.|+.|++||+. +..+..+.. +...+.+++|+|++ .++++++.||.|++||+.++.......
T Consensus 273 ~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 349 (416)
T 2pm9_A 273 QDEHLLLSSGRDNTVLLWNPESAEQLSQFPA---RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETET 349 (416)
T ss_dssp SCSSCEEEEESSSEEEEECSSSCCEEEEEEC---SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-----
T ss_pred CCCCeEEEEeCCCCEEEeeCCCCccceeecC---CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccc
Confidence 656999999999999999998 445555543 34678899999999 899999999999999998765432221
Q ss_pred -------------------------------ccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 481 -------------------------------VHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 481 -------------------------------~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.|..++.+++|+|+|++|++++.||+|+||++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 350 KQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp -----------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred cccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 16678889999999999999999999999985
No 41
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-38 Score=294.91 Aligned_cols=281 Identities=22% Similarity=0.350 Sum_probs=242.9
Q ss_pred ccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe
Q 010362 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282 (512)
Q Consensus 203 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~ 282 (512)
...+++. +|.+.|++++| |++++|++|+.||.|++||+.+++.... +..|...|.+++|+|++++|++++
T Consensus 9 ~~~~~l~-~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 9 QLSATLK-GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTV--------VYTGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp EEEEEEC-CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEE--------EEECSSCEEEEEEETTTTEEEEEE
T ss_pred HHHHHhh-CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEE--------eecCCccEEEEEECCCCCEEEEec
Confidence 4445554 99999999999 9999999999999999999988765543 445899999999999999999999
Q ss_pred CCCeEEEEEccCC---eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcC-
Q 010362 283 QDGKIKVWRIRSG---QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN- 358 (512)
Q Consensus 283 ~dg~i~vwd~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~- 358 (512)
.||.|++|++.+. +....+. .|...|.+++| +++++++++.||.|++|| .++....+..|...+.++.|.|
T Consensus 79 ~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 153 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF 153 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET
T ss_pred CCCeEEEEEeeecCCCCcccchh-hcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC
Confidence 9999999998764 4556665 78999999999 577999999999999999 6788888999999999999988
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCC
Q 010362 359 DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSG 437 (512)
Q Consensus 359 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~ 437 (512)
+++.+++++.||.|++||. ......+.. .+...+.+++++|++. +++++.++.+++||++ +.....+..
T Consensus 154 ~~~~l~~~~~d~~i~i~d~--~~~~~~~~~-----~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~~~~~~~- 223 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQN--DKVIKTFSG-----IHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDVLRTYEG- 223 (313)
T ss_dssp TTTEEEEEETTSCEEEEET--TEEEEEECS-----SCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCCEEEEEEC-
T ss_pred CCCEEEEEECCCCEEEEec--CceEEEEec-----cCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchhhhhhhhc-
Confidence 8999999999999999994 344444432 2567899999999874 9999999999999998 555555543
Q ss_pred cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 438 KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 438 ~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+...+.+++|+|++ .+++++.||.|++||+.+++++..+..|...|.+++|+|+++ +++++.||.|++||.
T Consensus 224 --~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 224 --HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQ 294 (313)
T ss_dssp --CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEES
T ss_pred --CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeC
Confidence 45679999999999 588999999999999999999999999999999999999998 567999999999984
No 42
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-38 Score=300.01 Aligned_cols=270 Identities=19% Similarity=0.297 Sum_probs=235.4
Q ss_pred eccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCc
Q 010362 185 LFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~ 264 (512)
++.+..+....+|+.........+. .|...|.+++|+|+|++|++|+.||.|++|++.++.... .....+.+|..
T Consensus 70 l~s~s~Dg~v~iWd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~----~~~~~~~~h~~ 144 (340)
T 1got_B 70 LLSASQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV----RVSRELAGHTG 144 (340)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEE-CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSC----EEEEEEECCSS
T ss_pred EEEEeCCCcEEEEECCCCCcceEee-cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcc----eeEEEecCCCc
Confidence 4445556678889888888888876 899999999999999999999999999999997754221 12235677999
Q ss_pred ceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEe
Q 010362 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF 344 (512)
Q Consensus 265 ~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~ 344 (512)
.|.++.|++++. +++++.|++|++||+.+++.+..+. +|...|.+++|+|++.++++|+.||.|++||++++.....+
T Consensus 145 ~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~ 222 (340)
T 1got_B 145 YLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 222 (340)
T ss_dssp CEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred cEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEE
Confidence 999999998875 8899999999999999999998887 89999999999999999999999999999999999999999
Q ss_pred eCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEE
Q 010362 345 RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIM 424 (512)
Q Consensus 345 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~ 424 (512)
.+|...|++++|+|++++|++|+.||+|++||+++++....+... .+...+.+++|+|++ .++++++.|+.|++|
T Consensus 223 ~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~----~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vw 297 (340)
T 1got_B 223 TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD----NIICGITSVSFSKSG-RLLLAGYDDFNCNVW 297 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT----TCCSCEEEEEECTTS-SEEEEEETTSEEEEE
T ss_pred cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC----CcccceEEEEECCCC-CEEEEECCCCeEEEE
Confidence 999999999999999999999999999999999998877665422 234579999999988 899999999999999
Q ss_pred ecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q 010362 425 TLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFS 469 (512)
Q Consensus 425 ~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd 469 (512)
|.. +.....+.. +...+.+++|+|+|.+|++|+.||.|++||
T Consensus 298 d~~~~~~~~~~~~---h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 298 DALKADRAGVLAG---HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ETTTCCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EcccCcEeeEeec---CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 987 444444443 456899999999999999999999999996
No 43
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.2e-39 Score=295.58 Aligned_cols=249 Identities=21% Similarity=0.312 Sum_probs=198.5
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC--CCeEEEEeCCCeE
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD--SEMLASGSQDGKI 287 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i 287 (512)
.+|.+.|++++|+|+|++||+|+.||+|+|||+.++.. .....+.+|..+|.+++|+|+ +++|++|+.||+|
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 48999999999999999999999999999999875421 123466789999999999874 8999999999999
Q ss_pred EEEEccCCe--eeEEeccccccCeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCce--eEEeeCCccceeEEEEcCCC-
Q 010362 288 KVWRIRSGQ--CLRRLERAHSEGVTSLVFSRD--GSQILSTSFDSTARIHGLKSGKL--LKEFRGHSSYVNDAIFTNDG- 360 (512)
Q Consensus 288 ~vwd~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~- 360 (512)
++||+.+++ .+..+. .|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+.+|...|.+++|+|++
T Consensus 80 ~iWd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp EEEEBSSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEcCCCceEEEEEee-cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence 999999874 444554 78999999999997 88999999999999999987632 45678899999999999973
Q ss_pred ------------CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC
Q 010362 361 ------------SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG 428 (512)
Q Consensus 361 ------------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 428 (512)
++|++|+.|++|++||++++.....
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~------------------------------------------- 195 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV------------------------------------------- 195 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEEE-------------------------------------------
T ss_pred cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-------------------------------------------
Confidence 4666666666666666554321000
Q ss_pred eEEEEeeCCcccCCcEEEEEECCCC---CEEEEEeCCCeEEEEEcCCCe---eEEec--cccCCCeEEEEEcCCCCeEEE
Q 010362 429 QVVKSFSSGKREGGDFVAACVSPKG---EWIYCVGEDRNLYCFSHQSGK---LEHLM--KVHEKDVIGVTHHPHRNLLAT 500 (512)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~s~~g---~~l~~g~~dg~i~iwd~~~~~---~~~~~--~~h~~~v~~v~~~p~~~~l~s 500 (512)
....+ ..|...|.+++|+|++ .+|++|+.|+.|++||+.++. ....+ ..|...|.+++|+|++++||+
T Consensus 196 -~~~~l---~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las 271 (297)
T 2pm7_B 196 -LESTL---EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271 (297)
T ss_dssp -EEEEE---CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred -EEEEe---cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEE
Confidence 01111 1245668889999984 899999999999999987643 12233 467889999999999999999
Q ss_pred EECCCeEEEecC
Q 010362 501 YGEDCTMKLWKP 512 (512)
Q Consensus 501 ~~~dg~i~iW~~ 512 (512)
++.||+|++|++
T Consensus 272 ~~~D~~v~lw~~ 283 (297)
T 2pm7_B 272 SGGDNKVTLWKE 283 (297)
T ss_dssp EETTSCEEEEEE
T ss_pred EcCCCcEEEEEE
Confidence 999999999973
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-38 Score=310.31 Aligned_cols=288 Identities=14% Similarity=0.235 Sum_probs=243.1
Q ss_pred cCcCceEEEEECCCCC-EEEEEeCCCeEEEEEc----CCCee------eccccc--cccceeeccCcceeEEEEcCCCCe
Q 010362 211 GTKSHAECARFSPDGQ-FLVSCSFDGFIEVWDY----LSGKL------KKDLQY--QADETFMMHDETVLCIEFSRDSEM 277 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~-~l~sg~~dg~i~iwd~----~~~~~------~~~~~~--~~~~~~~~h~~~v~~l~~s~~~~~ 277 (512)
.|.+.|++++|+|+|+ +||+|+.||.|++|++ .+++. ...+.. .......+|...|.+++|+|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 6779999999999999 9999999999999999 77762 222211 011112236889999999999999
Q ss_pred EEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccc-------
Q 010362 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY------- 350 (512)
Q Consensus 278 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~------- 350 (512)
|++++.||.|++|| .+++.+..+. .|...|.+++|+|++++|++++.||.|++||+.+++.+..+..+...
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeecc-CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 99999999999999 6777788876 89999999999999999999999999999999999999988887776
Q ss_pred --------eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 351 --------VNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 351 --------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
+.+++|+|++ .+++++.||.|++||+++++....+. .+...+.+++|+|++ ..+++++.++.|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~------~~~~~i~~~~~~~~~-~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLI------GHHGPISVLEFNDTN-KLLLSASDDGTLR 272 (425)
T ss_dssp -----CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEEC------CCSSCEEEEEEETTT-TEEEEEETTSCEE
T ss_pred cccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeec------cCCCceEEEEECCCC-CEEEEEcCCCEEE
Confidence 9999999985 68899999999999999987766654 467789999999987 7999999999999
Q ss_pred EEecCCe-EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEE
Q 010362 423 IMTLQGQ-VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 501 (512)
Q Consensus 423 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 501 (512)
+||++.. ....+.. +...+.+++|+|++ ++++++.||.|++||+.+++.+..+..|...|.+++|+|++++|+++
T Consensus 273 i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYG---HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp EECSSSBSCSEEECC---CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEE
T ss_pred EEECCCCccceEecC---CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEE
Confidence 9999843 3344332 35679999999999 99999999999999999999999999999999999999999999999
Q ss_pred ECCCeEEEecC
Q 010362 502 GEDCTMKLWKP 512 (512)
Q Consensus 502 ~~dg~i~iW~~ 512 (512)
+.||.|++||.
T Consensus 349 ~~dg~i~i~~~ 359 (425)
T 1r5m_A 349 FMDGQVNVYDL 359 (425)
T ss_dssp ETTSCEEEEEC
T ss_pred ECCCeEEEEEC
Confidence 99999999984
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.7e-39 Score=316.02 Aligned_cols=306 Identities=18% Similarity=0.175 Sum_probs=250.3
Q ss_pred CcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCccee
Q 010362 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267 (512)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~ 267 (512)
+..+....+|+.........+. .| ..+.+..|+|++++|++|+.||.|++||+.+++.... +.+|...|.
T Consensus 74 ~~~d~~v~i~d~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--------~~~h~~~v~ 143 (420)
T 3vl1_A 74 ARLDGHDFLFNTIIRDGSKMLK-RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREI--------DQAHVSEIT 143 (420)
T ss_dssp EEETTEEEEEECCSEETTTTSC-SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEE--------TTSSSSCEE
T ss_pred EEcCCcEEEEEecccceeeEEe-cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeee--------cccccCccE
Confidence 3334455666666555555443 33 4555668999999999999999999999988776543 335999999
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCC
Q 010362 268 CIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347 (512)
Q Consensus 268 ~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 347 (512)
+++|+|++++|++|+.||+|++||+.+++.+..+. .|...|.+++|+|++++|++++.||.|++||+++++.+..+..|
T Consensus 144 ~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 222 (420)
T 3vl1_A 144 KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRK 222 (420)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecC
Confidence 99999999999999999999999999999888886 89999999999999999999999999999999999998888753
Q ss_pred ---c---------------------cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEE
Q 010362 348 ---S---------------------SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVH 403 (512)
Q Consensus 348 ---~---------------------~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~ 403 (512)
. ..+.+++|+|+++++++++.||.|++||+++++....+.. .+...+.+++
T Consensus 223 ~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~ 297 (420)
T 3vl1_A 223 ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS-----KFTCSCNSLT 297 (420)
T ss_dssp TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC-----TTSSCEEEEE
T ss_pred CCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc-----ccCCCceeEE
Confidence 2 3445555678999999999999999999999887776642 4677999999
Q ss_pred EcCCCCCeEEEEcCCCcEEEEecCCe--EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe-------
Q 010362 404 LFPKNPDHIVVCNKTSSIYIMTLQGQ--VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK------- 474 (512)
Q Consensus 404 ~~~~~~~~l~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~------- 474 (512)
|+|++..++++++.|+.|++||++.. ....+..+ +...+.++. .++++++++++.||.|++|++.+..
T Consensus 298 ~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~ 374 (420)
T 3vl1_A 298 VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN--EGTPINNVY-FAAGALFVSSGFDTSIKLDIISDPESERPAIE 374 (420)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES--TTSCEEEEE-EETTEEEEEETTTEEEEEEEECCTTCCSCEEC
T ss_pred EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc--CCCCceEEE-eCCCCEEEEecCCccEEEEeccCCCCCcccee
Confidence 99999669999999999999999842 24444432 245577774 4578899999999999999987631
Q ss_pred --eEEeccccCCCeEEEEEcCCCC---eEEEEECCCeEEEecC
Q 010362 475 --LEHLMKVHEKDVIGVTHHPHRN---LLATYGEDCTMKLWKP 512 (512)
Q Consensus 475 --~~~~~~~h~~~v~~v~~~p~~~---~l~s~~~dg~i~iW~~ 512 (512)
....+..|.+.|.+++|+|++. .+++++.+|.+.+|+.
T Consensus 375 ~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 375 FETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp TTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred ccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence 1223456888999999999999 7888889999999974
No 46
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=306.63 Aligned_cols=300 Identities=18% Similarity=0.240 Sum_probs=245.8
Q ss_pred ecCcCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeecccccccc-----ceeeccCcceeEEEEcC-CCCeEEEEe
Q 010362 210 FGTKSHAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQAD-----ETFMMHDETVLCIEFSR-DSEMLASGS 282 (512)
Q Consensus 210 ~~h~~~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~h~~~v~~l~~s~-~~~~l~s~~ 282 (512)
.+|.+.|++++|+| ++++||+|+.||.|++||+.++.....+..... ....+|...|.+++|+| ++.+|++++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 38999999999999 999999999999999999998776554332111 11235999999999999 778999999
Q ss_pred CCCeEEEEEccCCeeeEEeccccccCeEEEEEecC---CCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCC
Q 010362 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD---GSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359 (512)
Q Consensus 283 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 359 (512)
.||.|++||+.+++....+. +...+.++.|+|. +.++++++.||.|++||+++++.+..+..|...|.+++|+|+
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 120 FDKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPR 197 (408)
T ss_dssp TTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSS
T ss_pred CCCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCC
Confidence 99999999999999888775 7788999999984 459999999999999999999999999999999999999999
Q ss_pred CC-EEEEEeCCCcEEEEeCCCCc-eeeecCC---------CCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC
Q 010362 360 GS-RVVTASSDCTVKVWDLKSTD-CLQTFKP---------PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG 428 (512)
Q Consensus 360 ~~-~l~~~~~dg~i~iwd~~~~~-~~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 428 (512)
++ .+++++.||.|++||++++. ....+.. ......+...+.+++|+|++ ..+++++.|+.+++||+..
T Consensus 198 ~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 198 YDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG-LHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT
T ss_pred CCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC-CEEEEecCCCeEEEEECCC
Confidence 98 58999999999999998765 3333211 11224678899999999987 8999999999999999984
Q ss_pred eEEE-EeeCC--cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCC
Q 010362 429 QVVK-SFSSG--KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 505 (512)
Q Consensus 429 ~~~~-~~~~~--~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg 505 (512)
.... ..... ...............+..+++++.++.|++||+.+++++..+.+|.+.|++++|+|++++|++++.||
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 356 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDC 356 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCC
Confidence 3322 11111 01111122223344556677778899999999999999999999999999999999999999999999
Q ss_pred eEEEecC
Q 010362 506 TMKLWKP 512 (512)
Q Consensus 506 ~i~iW~~ 512 (512)
.|++||+
T Consensus 357 ~i~iw~~ 363 (408)
T 4a11_B 357 NILAWVP 363 (408)
T ss_dssp CEEEEEE
T ss_pred eEEEEeC
Confidence 9999984
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.1e-40 Score=316.50 Aligned_cols=290 Identities=13% Similarity=0.116 Sum_probs=224.0
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCC--eeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSG--KLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 288 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~ 288 (512)
.+.+.|+|++|+|+|++||+|+.||.|++||+.++ +... .+.+|...|.+++|+|++++|++++.||+|+
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~--------~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR--------TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC--------CBCCCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE--------EEecCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 46778999999999999999999999999999877 3333 4556999999999999999999999999999
Q ss_pred EEEccCCe---eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc---eeEEeeC-CccceeEEEEcCCCC
Q 010362 289 VWRIRSGQ---CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK---LLKEFRG-HSSYVNDAIFTNDGS 361 (512)
Q Consensus 289 vwd~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~---~~~~~~~-~~~~v~~~~~~~~~~ 361 (512)
+||+.++. ....+. .|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|+++
T Consensus 81 vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLL-RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp EC------CCCCEEECC-CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS
T ss_pred EEEcCCCCceeeeeEec-ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC
Confidence 99999887 555554 789999999999999999999999999999998887 4677777 999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCceeee------------cCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe
Q 010362 362 RVVTASSDCTVKVWDLKSTDCLQT------------FKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ 429 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 429 (512)
+|++++.||.|++||++....... -...... +|...|.+++|+|++ .++++++.|+.|++||+...
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~-~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG-NALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS-SCEEEEETTTEEC-CEECST
T ss_pred EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC-CEEEEEeCCCcEEEEECCCC
Confidence 999999999999999964321110 0000111 577889999999988 79999999999999999843
Q ss_pred EE--EEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe--eE-----------------------------
Q 010362 430 VV--KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK--LE----------------------------- 476 (512)
Q Consensus 430 ~~--~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~--~~----------------------------- 476 (512)
.. ........+...+.+++|+|+|++|++|+.++.+ +|+...+. ..
T Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (377)
T 3dwl_C 238 EQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVS 316 (377)
T ss_dssp TSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-----
T ss_pred CCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccc
Confidence 22 2223333456779999999999999999877766 66554211 00
Q ss_pred -----E----------------eccccCCCeEEEEEcCCC-C---eEEEEECCCeEEEecC
Q 010362 477 -----H----------------LMKVHEKDVIGVTHHPHR-N---LLATYGEDCTMKLWKP 512 (512)
Q Consensus 477 -----~----------------~~~~h~~~v~~v~~~p~~-~---~l~s~~~dg~i~iW~~ 512 (512)
. ....|.+.|+++++.+.. . .|+|||.||.|++||.
T Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 317 FTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp --------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 012389999999987643 3 6999999999999984
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.3e-39 Score=311.17 Aligned_cols=279 Identities=19% Similarity=0.231 Sum_probs=236.9
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC
Q 010362 216 AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG 295 (512)
Q Consensus 216 v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~ 295 (512)
+++++|+|+|++|++|+.||.|++||+.+++....+. .| ..+....|+|++++|++|+.||.|++||+.++
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 129 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK--------RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN 129 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSC--------SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEe--------cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc
Confidence 4578999999999999999999999998876554332 24 44556678999999999999999999999999
Q ss_pred eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010362 296 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVW 375 (512)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 375 (512)
+....+. .|...|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.||.|++|
T Consensus 130 ~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 130 LQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp EEEEETT-SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ceeeecc-cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 8877765 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceeeecCCCCCCCCCCceeEEEE---------------------EcCCCCCeEEEEcCCCcEEEEecCC-eEEEE
Q 010362 376 DLKSTDCLQTFKPPPPLRGGDASVNSVH---------------------LFPKNPDHIVVCNKTSSIYIMTLQG-QVVKS 433 (512)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~~i~~~~---------------------~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~ 433 (512)
|+++++....+.... .+...+.++. |+|++ ..+++++.++.|++||++. .....
T Consensus 209 d~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKE---NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTIQ 284 (420)
T ss_dssp ETTTTEEEEEECBTT---BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEEE
T ss_pred ECCCCceeEEeecCC---CCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeEE
Confidence 999998888776432 2333444444 45655 7899999999999999984 44444
Q ss_pred eeCCcccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCe-eEEeccc-cCCCeEEEEEcCCCCeEEEEECCCeEEEe
Q 010362 434 FSSGKREGGDFVAACVSPKGE-WIYCVGEDRNLYCFSHQSGK-LEHLMKV-HEKDVIGVTHHPHRNLLATYGEDCTMKLW 510 (512)
Q Consensus 434 ~~~~~~~~~~~~~~~~s~~g~-~l~~g~~dg~i~iwd~~~~~-~~~~~~~-h~~~v~~v~~~p~~~~l~s~~~dg~i~iW 510 (512)
+.. .+...+.+++|+|++. ++++|+.||.|++||+.+++ ++..+.. |...|.++.| |++.+|++++.||.|++|
T Consensus 285 ~~~--~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw 361 (420)
T 3vl1_A 285 LPS--KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLD 361 (420)
T ss_dssp ECC--TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEE
T ss_pred ccc--ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEE
Confidence 433 2456799999999999 99999999999999999875 4667766 5677888855 578899999999999999
Q ss_pred c
Q 010362 511 K 511 (512)
Q Consensus 511 ~ 511 (512)
+
T Consensus 362 ~ 362 (420)
T 3vl1_A 362 I 362 (420)
T ss_dssp E
T ss_pred e
Confidence 8
No 49
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.6e-38 Score=292.50 Aligned_cols=269 Identities=22% Similarity=0.392 Sum_probs=224.3
Q ss_pred eccCcccccccccccCcc-----ccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeecccccccccee
Q 010362 185 LFRGTAAMKQDVEDMYPT-----TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETF 259 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 259 (512)
++.+..+....+|+.... .....+. +|...|.+++|+|+|++|++|+.||+|++||+.+++... .+
T Consensus 33 l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~--------~~ 103 (319)
T 3frx_A 33 LLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ--------RF 103 (319)
T ss_dssp EEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--------EE
T ss_pred EEEecCCccEEEecCCCCCccccccceEEe-CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeE--------EE
Confidence 444455555666765432 2334454 999999999999999999999999999999999987654 45
Q ss_pred eccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecC------CCEEEEEeCCCcEEEE
Q 010362 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD------GSQILSTSFDSTARIH 333 (512)
Q Consensus 260 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~dg~v~i~ 333 (512)
.+|...|.+++|+|++.+|++|+.|++|++||+. +.++..+. +|...|.++.|+|+ +..+++++.|+.|++|
T Consensus 104 ~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~w 181 (319)
T 3frx_A 104 VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAW 181 (319)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEEC-CCSSCEEEEEECCC------CCEEEEEETTSCEEEE
T ss_pred ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEE
Confidence 5699999999999999999999999999999986 55666665 79999999999985 4489999999999999
Q ss_pred eCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEE
Q 010362 334 GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 413 (512)
Q Consensus 334 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 413 (512)
|+++++....+.+|...|.+++|+|++++|++++.||+|++||+++++....+.. ...+.+++|+|++ ..++
T Consensus 182 d~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~v~~~~~sp~~-~~la 253 (319)
T 3frx_A 182 NLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-------QDEVFSLAFSPNR-YWLA 253 (319)
T ss_dssp ETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-------CSCEEEEEECSSS-SEEE
T ss_pred ECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------CCcEEEEEEcCCC-CEEE
Confidence 9999999999999999999999999999999999999999999999988877753 3579999999987 6666
Q ss_pred EEcCCCcEEEEecCCeEEE-EeeCC-----cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Q 010362 414 VCNKTSSIYIMTLQGQVVK-SFSSG-----KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG 473 (512)
Q Consensus 414 ~~~~~~~i~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~ 473 (512)
++. +..+++|+++..... .+... ..+...+.+++|+|||++|++|+.||.|++||+.++
T Consensus 254 ~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 254 AAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 655 455999999865433 22211 123456889999999999999999999999998764
No 50
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-37 Score=317.64 Aligned_cols=316 Identities=17% Similarity=0.238 Sum_probs=250.1
Q ss_pred ccccccccCcc----ccceEEEecCcCc-eEEEEECC--CCCEEEEEeCCCeEEEEEcCCC--------eeeccccc---
Q 010362 192 MKQDVEDMYPT----TLSHTIKFGTKSH-AECARFSP--DGQFLVSCSFDGFIEVWDYLSG--------KLKKDLQY--- 253 (512)
Q Consensus 192 ~~~~~~~~~~~----~~~~~~~~~h~~~-v~~~~~s~--~~~~l~sg~~dg~i~iwd~~~~--------~~~~~~~~--- 253 (512)
....+|+.... .....+. +|... |++++|+| ++++||+|+.||.|++||+.++ .....+..
T Consensus 39 ~~v~v~~~~~~~~~~~~~~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 117 (615)
T 1pgu_A 39 KSAFVRCLDDGDSKVPPVVQFT-GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG 117 (615)
T ss_dssp TEEEEEECCSSCCSSCSEEEEC-TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS
T ss_pred CeEEEEECCCCCCccccceEEe-cCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc
Confidence 34566776655 5666665 89999 99999999 9999999999999999999744 22221110
Q ss_pred ---------------------------------cccceeeccCcceeEEEEcCCCC-eEEEEeCCCeEEEEEccCCeeeE
Q 010362 254 ---------------------------------QADETFMMHDETVLCIEFSRDSE-MLASGSQDGKIKVWRIRSGQCLR 299 (512)
Q Consensus 254 ---------------------------------~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~~dg~i~vwd~~~~~~~~ 299 (512)
.....+.+|...|.+++|+|+++ .+++++.||.|++||+.+++.+.
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~ 197 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 197 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceee
Confidence 01123456778888888988887 79999999999999999999998
Q ss_pred Eecccccc---CeEEEEEecC-CCEEEEEeCCCcEEEEeCCCCceeEEe-e---CCccceeEEEEcCCCCEEEEEeCCCc
Q 010362 300 RLERAHSE---GVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEF-R---GHSSYVNDAIFTNDGSRVVTASSDCT 371 (512)
Q Consensus 300 ~~~~~~~~---~i~~~~~~~~-~~~l~~~~~dg~v~i~d~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~dg~ 371 (512)
.+. .|.. .|.+++|+|+ ++++++++.||.|++||+++++.+..+ . .|...|.+++|+ +++++++++.||.
T Consensus 198 ~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~ 275 (615)
T 1pgu_A 198 SDR-THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADAT 275 (615)
T ss_dssp EEC-SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSE
T ss_pred eec-ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCc
Confidence 887 7888 9999999999 999999999999999999999999998 6 899999999999 9999999999999
Q ss_pred EEEEeCCCCceeeecCCCC---------------------------------------CCCCC-----------------
Q 010362 372 VKVWDLKSTDCLQTFKPPP---------------------------------------PLRGG----------------- 395 (512)
Q Consensus 372 i~iwd~~~~~~~~~~~~~~---------------------------------------~~~~~----------------- 395 (512)
|++||+++++....+.... ...+|
T Consensus 276 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~ 355 (615)
T 1pgu_A 276 IRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSY 355 (615)
T ss_dssp EEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEET
T ss_pred EEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECC
Confidence 9999999887665554331 01122
Q ss_pred ----------------CceeEEEEEcCCC---------------------------------------------------
Q 010362 396 ----------------DASVNSVHLFPKN--------------------------------------------------- 408 (512)
Q Consensus 396 ----------------~~~i~~~~~~~~~--------------------------------------------------- 408 (512)
...|.++.+ +.+
T Consensus 356 dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 434 (615)
T 1pgu_A 356 DGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQS 434 (615)
T ss_dssp TSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEET
T ss_pred CCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEec
Confidence 223333333 111
Q ss_pred ---------------------CCeEEEEcC-CCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEE
Q 010362 409 ---------------------PDHIVVCNK-TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLY 466 (512)
Q Consensus 409 ---------------------~~~l~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~ 466 (512)
...+++++. ++.+++||+....... .....+...+.+++|+|+|++|++|+.||.|+
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 513 (615)
T 1pgu_A 435 FTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKIL 513 (615)
T ss_dssp TTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEE
Confidence 123444444 5555555555433322 33334567899999999999999999999999
Q ss_pred EEEcCCCeeEEeccc-cCCCeEEEEEcC----------CCCeEEEEECCCeEEEecC
Q 010362 467 CFSHQSGKLEHLMKV-HEKDVIGVTHHP----------HRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 467 iwd~~~~~~~~~~~~-h~~~v~~v~~~p----------~~~~l~s~~~dg~i~iW~~ 512 (512)
+||+.+++++..+.+ |...|++++|+| ++++|++++.||.|++||.
T Consensus 514 iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~ 570 (615)
T 1pgu_A 514 LYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV 570 (615)
T ss_dssp EEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEES
T ss_pred EeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEEC
Confidence 999999999999988 999999999999 9999999999999999984
No 51
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-37 Score=294.71 Aligned_cols=274 Identities=19% Similarity=0.284 Sum_probs=236.9
Q ss_pred eeccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccC
Q 010362 184 DLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD 263 (512)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~ 263 (512)
.++.+..+....+|+..+....+.+. .|...|.+++|+|+|.+|++|+.|+.+++|++........ ......+.+|.
T Consensus 78 ~l~s~s~Dg~v~vWd~~~~~~~~~~~-~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~--~~~~~~~~~h~ 154 (354)
T 2pbi_B 78 RIVSSSQDGKVIVWDSFTTNKEHAVT-MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM--AAKKKSVAMHT 154 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE-CSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS--GGGCEEEEECS
T ss_pred EEEEEeCCCeEEEEECCCCCcceEEe-cCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc--cccceeeeccC
Confidence 45556667778899988888888876 7889999999999999999999999999999865432111 12334567799
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEec--CCCEEEEEeCCCcEEEEeCCCCcee
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSR--DGSQILSTSFDSTARIHGLKSGKLL 341 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~i~d~~~~~~~ 341 (512)
..|.+++|+|++..|++++.||+|++||+.+++.+..+. +|...|.+++|+| ++++|++|+.||.|++||+++++++
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV 233 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 999999999999999999999999999999999999887 8999999999988 5689999999999999999999999
Q ss_pred EEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcE
Q 010362 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421 (512)
Q Consensus 342 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i 421 (512)
..+.+|...|++++|+|++++|++++.|++|++||++++.....+... .+...+.++.|+|++ .++++++.|+.|
T Consensus 234 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~----~~~~~~~~~~~s~~g-~~l~~g~~d~~i 308 (354)
T 2pbi_B 234 QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE----SIIFGASSVDFSLSG-RLLFAGYNDYTI 308 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT----TCCSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC----CcccceeEEEEeCCC-CEEEEEECCCcE
Confidence 999999999999999999999999999999999999988766655432 234578899999988 899999999999
Q ss_pred EEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q 010362 422 YIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFS 469 (512)
Q Consensus 422 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd 469 (512)
++||+. +..+..+.. +...+.+++|+|+|++|++|+.||.|++|+
T Consensus 309 ~vwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 309 NVWDVLKGSRVSILFG---HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTTCSEEEEECC---CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCCceEEEEEC---CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999997 555554433 457899999999999999999999999996
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-39 Score=321.94 Aligned_cols=309 Identities=9% Similarity=0.080 Sum_probs=230.9
Q ss_pred cccccccccCccccc----eEEEecCcCceEEEEECCC------CCEEEEEeCCCeEEEEEcCCCeeecc---ccccccc
Q 010362 191 AMKQDVEDMYPTTLS----HTIKFGTKSHAECARFSPD------GQFLVSCSFDGFIEVWDYLSGKLKKD---LQYQADE 257 (512)
Q Consensus 191 ~~~~~~~~~~~~~~~----~~~~~~h~~~v~~~~~s~~------~~~l~sg~~dg~i~iwd~~~~~~~~~---~~~~~~~ 257 (512)
+....+|+..+.... .++ .+|.+.|++++|+|+ +.+||+|+.||+|+|||+.++..... ....+..
T Consensus 182 D~tI~iWd~~~~~~~~~~~~~l-~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~ 260 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHCVKVQTI-VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL 260 (524)
T ss_dssp CEEEEEEEEETTTCCEEEEEEE-EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE
T ss_pred CceEEEEEccCCCCCceEEEEE-EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE
Confidence 334557776555432 223 367899999999997 57999999999999999987643210 0112334
Q ss_pred eeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCee-eEEeccccccCeEEE--EEecCC-CEEEEEeCCCcEEEE
Q 010362 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQC-LRRLERAHSEGVTSL--VFSRDG-SQILSTSFDSTARIH 333 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~dg~v~i~ 333 (512)
.+.+|...|++++|+|++ .|++|+.||+|++||+.++.. ...+. .|...|.++ +|+|++ .+|++|+.|++|++|
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklW 338 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIF 338 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEE
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEEEE
Confidence 677899999999999864 899999999999999997743 34454 799999999 568887 899999999999999
Q ss_pred eCCCCceeEEeeCCcc--ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 334 GLKSGKLLKEFRGHSS--YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 334 d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
|++++++...+.+|.. .|.+++|+|++..+++++.|++|++||++++.+...+. +|...|++++|+|++ ..
T Consensus 339 D~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~------gH~~~V~sva~Sp~g-~~ 411 (524)
T 2j04_B 339 NPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV------SRETTITAIGVSRLH-PM 411 (524)
T ss_dssp CGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE------ECSSCEEEEECCSSC-CB
T ss_pred ECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee------cCCCceEEEEeCCCC-Ce
Confidence 9998888777777653 58899999999999999999999999999987766544 578899999999988 78
Q ss_pred EEEEcCCCcEEEEecCCeEEEEeeCC--cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC-CCeeEEeccccCCCeEE
Q 010362 412 IVVCNKTSSIYIMTLQGQVVKSFSSG--KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ-SGKLEHLMKVHEKDVIG 488 (512)
Q Consensus 412 l~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~ 488 (512)
+++++.|+.|++|+............ ......+..++|+|+|..+. ... .+.+|+.. ++..+..+.+|...|++
T Consensus 412 l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~ 488 (524)
T 2j04_B 412 VLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINITC 488 (524)
T ss_dssp CEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSCCC
T ss_pred EEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceEEE
Confidence 99999999999999875422111100 00112466889999998552 222 23344332 56778889999999999
Q ss_pred EEEcCCCC---eEEEEECCCeEEEecC
Q 010362 489 VTHHPHRN---LLATYGEDCTMKLWKP 512 (512)
Q Consensus 489 v~~~p~~~---~l~s~~~dg~i~iW~~ 512 (512)
|+|+|++. ++|+|+.||.|+||++
T Consensus 489 Vafsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 489 TKWNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp EEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred EECCCCCCccHHHHhhccCceEEEEEc
Confidence 99999864 9999999999999985
No 53
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.2e-38 Score=344.74 Aligned_cols=290 Identities=22% Similarity=0.333 Sum_probs=256.6
Q ss_pred EecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEE
Q 010362 209 KFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 288 (512)
Q Consensus 209 ~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~ 288 (512)
..+|.+.|++++|+|+|+++|+|+.||+|++||+.+++.... +.+|...|.+++|+|++++|++|+.||+|+
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~--------~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLD--------IKAHEDEVLCCAFSSDDSYIATCSADKKVK 682 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--------ECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE--------eccCCCCEEEEEEecCCCEEEEEeCCCeEE
Confidence 348999999999999999999999999999999999876554 446999999999999999999999999999
Q ss_pred EEEccCCeeeEEeccccccCeEEEEEec--CCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEE
Q 010362 289 VWRIRSGQCLRRLERAHSEGVTSLVFSR--DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA 366 (512)
Q Consensus 289 vwd~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 366 (512)
+||+.+++.+..+. .|...|.+++|+| ++..+++|+.||.|++||+++++.+..+.+|...|++++|+|++++++++
T Consensus 683 vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~ 761 (1249)
T 3sfz_A 683 IWDSATGKLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASC 761 (1249)
T ss_dssp EEETTTCCEEEEEE-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred EEECCCCceEEEEc-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEE
Confidence 99999999999987 8999999999999 55689999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEEeCCCCceeeecCCCCCC-------CCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCc
Q 010362 367 SSDCTVKVWDLKSTDCLQTFKPPPPL-------RGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGK 438 (512)
Q Consensus 367 ~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~ 438 (512)
+.||.|++||++++.....+...... ......+.+++|+|++ ..+++++ ++.+.+|+... .........
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~-~~~v~~~d~~~~~~~~~~~~~- 838 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADG-DKIIVAA-KNKVLLFDIHTSGLLAEIHTG- 838 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTS-SEEEEEE-TTEEEEEETTTCCEEEEEECS-
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCceeEEcCC-
Confidence 99999999999988776665433211 1233478889999988 5555555 68999999984 444444332
Q ss_pred ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 439 ~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
+...+.+++|+|+++++++++.||.|++||+.++..+..+.+|.+.|++++|+|+++++++++.||.|++|+
T Consensus 839 -~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 839 -HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp -SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred -CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 356789999999999999999999999999999999999999999999999999999999999999999997
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.7e-38 Score=296.21 Aligned_cols=281 Identities=16% Similarity=0.214 Sum_probs=239.3
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVW 290 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vw 290 (512)
-|.+.|.+++|+|||++++++..++.+.+|+........ ...+|...|.+++|+|++++|++++ ||.|++|
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw 77 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQI--------NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVW 77 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEE--------EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEE
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccc--------eeccCCCceEEEEEecCCcEEEEcC-CCeEEEE
Confidence 356679999999999999999888877666543322111 2235999999999999999999999 9999999
Q ss_pred EccCCeeeEEec----cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc--eeEEeeCCccceeEEEEcCCCCEEE
Q 010362 291 RIRSGQCLRRLE----RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK--LLKEFRGHSSYVNDAIFTNDGSRVV 364 (512)
Q Consensus 291 d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~ 364 (512)
|+.++.....+. ..|...|.+++|+|+++++++++.||.|++||+++++ ....+..|...|.+++|+|++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 157 (337)
T 1gxr_A 78 DISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF 157 (337)
T ss_dssp ETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred ECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEE
Confidence 998875433222 1578899999999999999999999999999999887 5677888999999999999999999
Q ss_pred EEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeCCcccCCc
Q 010362 365 TASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSGKREGGD 443 (512)
Q Consensus 365 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~ 443 (512)
+++.||.|++||+++++....+. .+...+.++.|+|++ ..+++++.++.+++||++.. ....+. +...
T Consensus 158 ~~~~dg~v~~~d~~~~~~~~~~~------~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~----~~~~ 226 (337)
T 1gxr_A 158 SCCSDGNIAVWDLHNQTLVRQFQ------GHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQQHD----FTSQ 226 (337)
T ss_dssp EEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE----CSSC
T ss_pred EEeCCCcEEEEeCCCCceeeeee------cccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCceEeeec----CCCc
Confidence 99999999999999988777765 466789999999987 89999999999999999844 433332 3456
Q ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 444 FVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 444 ~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+.+++|+|+++++++++.+|.|++||+.+++.. .+..|...|.+++|+|++++|++++.||.|++||.
T Consensus 227 v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 899999999999999999999999999988764 56679999999999999999999999999999984
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.2e-38 Score=330.14 Aligned_cols=287 Identities=22% Similarity=0.336 Sum_probs=252.0
Q ss_pred ceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC
Q 010362 205 SHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 284 (512)
Q Consensus 205 ~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d 284 (512)
.+.+. +|.+.|++++|+|+|++||+|+.||.|+|||+.+++.... +.+|..+|.+++|+|++++|++|+.|
T Consensus 6 ~~~~~-~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 6 KKTFS-NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRS--------IQVTETPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp EEEEE-EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE--------EECCSSCEEEEEEEGGGTEEEEEETT
T ss_pred ceeee-cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEE--------EecCCCcEEEEEEeCCCCEEEEEeCC
Confidence 34454 8999999999999999999999999999999998876653 44599999999999999999999999
Q ss_pred CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-ceeEEeeCCccceeEEEEcC-CCCE
Q 010362 285 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSSYVNDAIFTN-DGSR 362 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~ 362 (512)
|.|++||+.+++.+..+. .|...|.+++|+|++++|++++.||.|++||+.++ .....+.+|...|.+++|+| +++.
T Consensus 77 g~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp SEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE
Confidence 999999999999988886 89999999999999999999999999999999887 66778889999999999999 8889
Q ss_pred EEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcC--CCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCcc
Q 010362 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP--KNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKR 439 (512)
Q Consensus 363 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~ 439 (512)
+++++.||.|++||+.++.....+.. .+...+..+.|+| ++ ..+++++.++.|++||... .....+..
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~--- 226 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTT-----GQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKSCVATLEG--- 226 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEEC-----CCTTCCCEEEECCSTTC-CEEEEECTTSEEEEEETTTTEEEEEEEC---
T ss_pred EEEEeCCCeEEEEECCCCcceeEEec-----CCCCCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCCCcEEEEEcC---
Confidence 99999999999999988776665542 2346889999999 55 7999999999999999984 44444433
Q ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCC--eEEEEECCCeEEEec
Q 010362 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN--LLATYGEDCTMKLWK 511 (512)
Q Consensus 440 ~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~--~l~s~~~dg~i~iW~ 511 (512)
+...+.+++|+|+|+++++++.||.|++||..+++.+..+..|...+.+++|+|++. ++++++ |+.+.+|+
T Consensus 227 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 299 (814)
T 3mkq_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLS 299 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEE
Confidence 356799999999999999999999999999999999999999999999999999986 355554 66677775
No 56
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.4e-39 Score=302.80 Aligned_cols=276 Identities=18% Similarity=0.270 Sum_probs=202.3
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC------CCeEEEE
Q 010362 217 ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ------DGKIKVW 290 (512)
Q Consensus 217 ~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~------dg~i~vw 290 (512)
..+.+.+++.++.+. .+.....|++.... ..+|...|.+++|+|||++|++|+. |+.|++|
T Consensus 9 sg~d~g~~~~~~~~~-g~~~~~~w~~p~~~------------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~ 75 (357)
T 4g56_B 9 SGVDLGTENLYFQSN-GSSKGSAWGRPVTA------------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVF 75 (357)
T ss_dssp --------------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEE
T ss_pred cCCCCCccceEEecC-CCccccccCCCCCC------------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEE
Confidence 345566666555544 46778889865432 1249999999999999999999997 7889999
Q ss_pred EccCCeeeEEe---ccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeE----EeeCCccceeEEEEcCCCCEE
Q 010362 291 RIRSGQCLRRL---ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLK----EFRGHSSYVNDAIFTNDGSRV 363 (512)
Q Consensus 291 d~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l 363 (512)
+..++.....+ ...|...|.+++|+|++. +++++.||+|++||+.+++... ...+|...|++++|+|++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l 154 (357)
T 4g56_B 76 KDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQA 154 (357)
T ss_dssp SSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEE
T ss_pred ECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEE
Confidence 98776543222 125788999999999875 5677889999999998876543 344799999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCc
Q 010362 364 VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGD 443 (512)
Q Consensus 364 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 443 (512)
++++.||.|++||+++++....+. +|...|.+++|+|++..++++++.|+.|++||++............+...
T Consensus 155 ~sgs~dg~v~iwd~~~~~~~~~~~------~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 228 (357)
T 4g56_B 155 VSGGKDFSVKVWDLSQKAVLKSYN------AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI 228 (357)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC
T ss_pred EEEeCCCeEEEEECCCCcEEEEEc------CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccccc
Confidence 999999999999999998887775 56789999999999888999999999999999985433333333334667
Q ss_pred EEEEEECCC-CCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCC-CeEEEEECCCeEEEecC
Q 010362 444 FVAACVSPK-GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR-NLLATYGEDCTMKLWKP 512 (512)
Q Consensus 444 ~~~~~~s~~-g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~~~dg~i~iW~~ 512 (512)
+.+++|+|+ +.++++|+.|+.|++||+.+++++..+.+|...|++++|+|++ ++||+|+.||+|+|||.
T Consensus 229 v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDA 299 (357)
T ss_dssp EEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred ccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEEC
Confidence 899999997 5688999999999999999999999999999999999999987 68999999999999984
No 57
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.1e-37 Score=301.45 Aligned_cols=297 Identities=21% Similarity=0.396 Sum_probs=261.1
Q ss_pred ccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcc
Q 010362 186 FRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265 (512)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~ 265 (512)
+.+..+....+|+.........+. +|.+.|++++|+ ++++++|+.||+|++||+.+++.... +.+|...
T Consensus 133 ~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~--------~~~h~~~ 201 (445)
T 2ovr_B 133 VSGSDDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT--------LYGHTST 201 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEECC-CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE--------ECCCSSC
T ss_pred EEEECCCcEEEEECCCCcEEEEEc-CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE--------ECCCCCc
Confidence 344555667788888888777776 999999999997 66999999999999999999876653 4469999
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee
Q 010362 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR 345 (512)
Q Consensus 266 v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~ 345 (512)
|.+++|+ ++.+++|+.||+|++||+.+++.+..+. .|...|.+++| ++.++++|+.||.|++||+++++.+..+.
T Consensus 202 v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 276 (445)
T 2ovr_B 202 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 276 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEEC
T ss_pred EEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEec
Confidence 9999996 5689999999999999999999988886 89999999999 68899999999999999999999999999
Q ss_pred CCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEe
Q 010362 346 GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 425 (512)
Q Consensus 346 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~ 425 (512)
+|...|.++.| ++.++++++.||.|++||+++++....+. ++...+.++.+.+ ..+++++.|+.|++||
T Consensus 277 ~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd 345 (445)
T 2ovr_B 277 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT------GHQSLTSGMELKD---NILVSGNADSTVKIWD 345 (445)
T ss_dssp CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC------CCCSCEEEEEEET---TEEEEEETTSCEEEEE
T ss_pred CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc------CCcccEEEEEEeC---CEEEEEeCCCeEEEEE
Confidence 99999999999 78899999999999999999998887765 4566788887753 6999999999999999
Q ss_pred cC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEec-----cccCCCeEEEEEcCCCCeEE
Q 010362 426 LQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM-----KVHEKDVIGVTHHPHRNLLA 499 (512)
Q Consensus 426 ~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~ 499 (512)
++ +.....+.....+...+.+++++ ++++++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|++.+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la 423 (445)
T 2ovr_B 346 IKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCA 423 (445)
T ss_dssp TTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEE
T ss_pred CCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEE
Confidence 97 56666666655567789999985 689999999999999999999988887 46888999999999999999
Q ss_pred EEECCCe----EEEec
Q 010362 500 TYGEDCT----MKLWK 511 (512)
Q Consensus 500 s~~~dg~----i~iW~ 511 (512)
+|+.||+ |.|||
T Consensus 424 ~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 424 VGSRNGTEETKLLVLD 439 (445)
T ss_dssp EECSSSSSCCEEEEEE
T ss_pred EcccCCCCccEEEEEE
Confidence 9999998 99997
No 58
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.4e-39 Score=299.47 Aligned_cols=267 Identities=18% Similarity=0.194 Sum_probs=201.2
Q ss_pred EEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcC--CCCeEEEEeCC
Q 010362 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSR--DSEMLASGSQD 284 (512)
Q Consensus 207 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~~~d 284 (512)
.+..+|.+.|++++|+|+|++||+|+.|++|+|||+.++... ....+.+|...|.+++|+| ++++|++|+.|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~------~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI------LIADLRGHEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE------EEEEEECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE------EEEEEcCCCccEEEEEeCCCCCCCEEEEEECC
Confidence 344599999999999999999999999999999999876421 1235678999999999986 48999999999
Q ss_pred CeEEEEEccCCe--eeEEeccccccCeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCce---eEEeeCCccceeEEEEc
Q 010362 285 GKIKVWRIRSGQ--CLRRLERAHSEGVTSLVFSRD--GSQILSTSFDSTARIHGLKSGKL---LKEFRGHSSYVNDAIFT 357 (512)
Q Consensus 285 g~i~vwd~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~~---~~~~~~~~~~v~~~~~~ 357 (512)
++|++||+.++. ....+. +|...|.+++|+|+ +.+|++|+.|+.|++||++++.. ...+.+|...|.+++|+
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHA-GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp SCEEEECCSSSCCCEEEEEC-CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEEC
T ss_pred CEEEEEECCCCcceEEEEcc-CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEc
Confidence 999999999874 445554 79999999999997 78999999999999999987632 34556799999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeC
Q 010362 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSS 436 (512)
Q Consensus 358 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~ 436 (512)
|+... +.+ .+...+ ..+....++++++.|+.|++||++.. .......
T Consensus 160 ~~~~~-------~~~--~~~~~~-----------------------~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 207 (316)
T 3bg1_A 160 PAVVP-------GSL--IDHPSG-----------------------QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK 207 (316)
T ss_dssp CCCCC---------------CCS-----------------------CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC
T ss_pred cccCC-------ccc--cccccc-----------------------cCccccceEEEecCCCeEEEEEeCCCCccceeee
Confidence 97420 000 000000 01112256777777777777777622 1122222
Q ss_pred CcccCCcEEEEEECCCC----CEEEEEeCCCeEEEEEcCCC---e-eEEeccccCCCeEEEEEcCCCCeEEEEECCCeEE
Q 010362 437 GKREGGDFVAACVSPKG----EWIYCVGEDRNLYCFSHQSG---K-LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 508 (512)
Q Consensus 437 ~~~~~~~~~~~~~s~~g----~~l~~g~~dg~i~iwd~~~~---~-~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~ 508 (512)
...|...+.+++|+|++ .+|++|+.||.|++|++.+. . ....+..|...|.+++|+|++++||+++.||+|+
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 33456678999999986 89999999999999998763 1 2234567889999999999999999999999999
Q ss_pred EecC
Q 010362 509 LWKP 512 (512)
Q Consensus 509 iW~~ 512 (512)
+|++
T Consensus 288 lw~~ 291 (316)
T 3bg1_A 288 LWKE 291 (316)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9973
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=307.64 Aligned_cols=297 Identities=16% Similarity=0.242 Sum_probs=229.7
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeee---ccccccccceeeccC------------cceeEEEEcCCC
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLK---KDLQYQADETFMMHD------------ETVLCIEFSRDS 275 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~h~------------~~v~~l~~s~~~ 275 (512)
.|.+.|+|++|+|+|++||+|+.||.|+|||+.+++.. ....+.....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 57889999999999999999999999999999876521 111122334667788 889999999998
Q ss_pred --CeEEEEeCCCeEEEEEccCCeee---------------------------------------EEeccccccCeEEEEE
Q 010362 276 --EMLASGSQDGKIKVWRIRSGQCL---------------------------------------RRLERAHSEGVTSLVF 314 (512)
Q Consensus 276 --~~l~s~~~dg~i~vwd~~~~~~~---------------------------------------~~~~~~~~~~i~~~~~ 314 (512)
.+|++++.||+|++||+.++... ..+..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999999875432 1333478999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEeCCC-CceeE-------EeeCCccceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCce---
Q 010362 315 SRDGSQILSTSFDSTARIHGLKS-GKLLK-------EFRGHSSYVNDAIFTNDG-SRVVTASSDCTVKVWDLKSTDC--- 382 (512)
Q Consensus 315 ~~~~~~l~~~~~dg~v~i~d~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~--- 382 (512)
+|++++|++| .|+.|++||+++ ++.+. .+.+|...|++++|+|++ ++|++++.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999984 34444 255789999999999998 9999999999999999998875
Q ss_pred -eeecCCCCCC------CCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC--CeEEEEeeCCcccCC-----------
Q 010362 383 -LQTFKPPPPL------RGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ--GQVVKSFSSGKREGG----------- 442 (512)
Q Consensus 383 -~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~----------- 442 (512)
...+...... ..+...+.+++|+|++ .++++++. +.|++||++ +..+..+..+.....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 4444422110 0111389999999977 78888888 999999997 344444433321111
Q ss_pred -cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEec--------------------------------cccCCCeEEE
Q 010362 443 -DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLM--------------------------------KVHEKDVIGV 489 (512)
Q Consensus 443 -~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~--------------------------------~~h~~~v~~v 489 (512)
.+..++|+|+|++|++|+.||.|++||+.+++.+... ..+...|..+
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 1334899999999999999999999999998765311 0234568899
Q ss_pred EEcCCCCeEEEEECCCeEEEec
Q 010362 490 THHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 490 ~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
+|+|++++||+++.++ +++|.
T Consensus 423 ~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 423 AWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp EECSSSSEEEEECSSC-EEEEE
T ss_pred EECCCCCEEEEEecce-eeeec
Confidence 9999999999998876 66664
No 60
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=293.39 Aligned_cols=251 Identities=17% Similarity=0.288 Sum_probs=210.2
Q ss_pred ceeeccCc-ceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeee--EEeccccccCeEEEEEecCCCEEEEEeCCCcEEEE
Q 010362 257 ETFMMHDE-TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL--RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIH 333 (512)
Q Consensus 257 ~~~~~h~~-~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~ 333 (512)
..+.+|.. .|.+++|+|+|++||+|+.|++|++||+.++... ..+..+|...|.+++|+|++++|++|+.|+.+++|
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEE
Confidence 35567887 9999999999999999999999999999988643 23334799999999999999999999999999999
Q ss_pred eCCCCc--eeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 334 GLKSGK--LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 334 d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
|..++. .+..+.+|...|.+++|+|++++|++++.|++|++||++++....... ...+|...|.+++|+|++ .+
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~---~~~~h~~~v~~~~~~p~~-~~ 164 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS---VLNSHTQDVKHVVWHPSQ-EL 164 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEE---EECCCCSCEEEEEECSSS-SC
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEE---EecCcCCCeEEEEECCCC-CE
Confidence 998764 577889999999999999999999999999999999998764322111 123577889999999987 79
Q ss_pred EEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC---------------eeE
Q 010362 412 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG---------------KLE 476 (512)
Q Consensus 412 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~---------------~~~ 476 (512)
+++++.|+.|++|+..............+...+.+++|+|+|++|++|+.||.|++||.... +++
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 99999999999999985433222222335678999999999999999999999999996322 233
Q ss_pred Eeccc-cCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 477 HLMKV-HEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 477 ~~~~~-h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
..+.+ |...|.+++|+|++..|++++.|+.|++|+
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ 280 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 44444 888999999999999999999999999996
No 61
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-37 Score=289.91 Aligned_cols=279 Identities=19% Similarity=0.270 Sum_probs=209.7
Q ss_pred eccCcccccccccccCcc--ccceEEEec-CcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeec
Q 010362 185 LFRGTAAMKQDVEDMYPT--TLSHTIKFG-TKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~-h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 261 (512)
++.+..+....+|+.... .....+..+ |...|.+++|+|++++||+|+.||+|+|||+...... .........+.+
T Consensus 27 las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~-~~~~~~~~~~~~ 105 (330)
T 2hes_X 27 LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR-TFEMDLLAIIEG 105 (330)
T ss_dssp EEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--------CCCEEEEEEC-
T ss_pred EEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc-cccceeEEEEcC
Confidence 334444555666766543 333444234 9999999999999999999999999999998643211 011123345678
Q ss_pred cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC----eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC
Q 010362 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG----QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 337 (512)
|...|.+++|+|++++|++|+.|++|++||+... +++..+. .|...|.+++|+|++.+|++|+.|++|++||..+
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999999999999999999999999999999432 4555665 8999999999999999999999999999999877
Q ss_pred C--ceeEEeeCCccceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCc--------eeeecCCCCCCCCCCceeEEEEEc
Q 010362 338 G--KLLKEFRGHSSYVNDAIFTND--GSRVVTASSDCTVKVWDLKSTD--------CLQTFKPPPPLRGGDASVNSVHLF 405 (512)
Q Consensus 338 ~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~~~~~i~~~~~~ 405 (512)
+ +++..+.+|...|.+++|+|+ +..|++++.|++|++||++.+. +...+. ..|...|.+++|+
T Consensus 185 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~v~~s 259 (330)
T 2hes_X 185 DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILP-----DVHKRQVYNVAWG 259 (330)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECC-----SCCSSCEEEEEEC
T ss_pred CCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecc-----cccccceEEEEEc
Confidence 6 678889999999999999998 6789999999999999987642 222221 1367899999999
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCeEEEEe-eCCcccCC-cEEEEEECC--CCCEEEEEeCCCeEEEEEcCC
Q 010362 406 PKNPDHIVVCNKTSSIYIMTLQGQVVKSF-SSGKREGG-DFVAACVSP--KGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 406 ~~~~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~s~--~g~~l~~g~~dg~i~iwd~~~ 472 (512)
+. ..+++++.|+.|++|+......... .....+.. .+.+++|+| ++++|++|+.||.|++||+.+
T Consensus 260 ~~--~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 260 FN--GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TT--SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CC--CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 65 4899999999999999875422111 11122333 799999999 789999999999999999864
No 62
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.1e-38 Score=300.27 Aligned_cols=287 Identities=19% Similarity=0.301 Sum_probs=240.0
Q ss_pred eccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCc
Q 010362 185 LFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~ 264 (512)
++.+..+....+|+.......+.+. +|...|.+++|+|+|++||+|+.|+.|++||+.+..... -.......+.+|..
T Consensus 81 l~s~s~D~~v~iWd~~~~~~~~~~~-~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~gh~~ 158 (380)
T 3iz6_a 81 IVSASQDGRLIVWNALTSQKTHAIK-LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD-GNMPVSRVLTGHKG 158 (380)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC-CSSTTCCBCCCCSS
T ss_pred EEEEeCCCeEEEEECCCCccceEEe-cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc-CCccceeeccCCCc
Confidence 4555666778899988888888887 899999999999999999999999999999987643211 11223346778999
Q ss_pred ceeEEEEcCC-CCeEEEEeCCCeEEEEEccCCeeeEEec----cccccCeEEEEEec-CCCEEEEEeCCCcEEEEeCC-C
Q 010362 265 TVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLE----RAHSEGVTSLVFSR-DGSQILSTSFDSTARIHGLK-S 337 (512)
Q Consensus 265 ~v~~l~~s~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~----~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~i~d~~-~ 337 (512)
.|.++.|+|+ +..|++|+.|++|++||+.+++.+..+. .+|...|.+++|+| ++++|++|+.|+.|++||++ .
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT
T ss_pred ceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC
Confidence 9999999997 4579999999999999999999887662 36889999999987 88999999999999999998 4
Q ss_pred CceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCC-CCCCceeEEEEEcCCCCCeEEEEc
Q 010362 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL-RGGDASVNSVHLFPKNPDHIVVCN 416 (512)
Q Consensus 338 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~ 416 (512)
++.+..+.+|...|++++|+|++++|++|+.||+|++||++++.....+...... ..+...+.+++|+|++ .++++++
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~ 317 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGY 317 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEEC
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCC-CEEEEEE
Confidence 5778899999999999999999999999999999999999999888776543321 2233458999999988 8999999
Q ss_pred CCCcEEEEecC-CeEEEEeeC-CcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe
Q 010362 417 KTSSIYIMTLQ-GQVVKSFSS-GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 417 ~~~~i~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~ 474 (512)
.++.|++||.. +.....+.. ...+...|.+++|+|+|++|++|+.||.|++|++...+
T Consensus 318 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 318 SNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp TTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999987 444444422 23467789999999999999999999999999987643
No 63
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.4e-37 Score=342.96 Aligned_cols=308 Identities=23% Similarity=0.355 Sum_probs=266.5
Q ss_pred CcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCccee
Q 010362 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267 (512)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~ 267 (512)
+..+....+|+........++. +|.+.|.+++|+|+|++||+|+.||+|++||+.+++... .+.+|...|.
T Consensus 633 ~~~d~~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~--------~~~~~~~~v~ 703 (1249)
T 3sfz_A 633 CGADKTLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH--------TYDEHSEQVN 703 (1249)
T ss_dssp EETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--------EEECCSSCEE
T ss_pred EeCCCeEEEEECCCCCEEEEec-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE--------EEcCCCCcEE
Confidence 3444567788888888888887 999999999999999999999999999999999887665 3456999999
Q ss_pred EEEEcC--CCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEe-
Q 010362 268 CIEFSR--DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF- 344 (512)
Q Consensus 268 ~l~~s~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~- 344 (512)
+++|+| ++.++++|+.||.|++||+.+++.+..+. +|...|.+++|+|+++++++++.||.|++||+++++....+
T Consensus 704 ~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 704 CCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF-GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp EEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC-CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred EEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec-CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceec
Confidence 999999 55689999999999999999999998887 89999999999999999999999999999998766543322
Q ss_pred ------------------------------------------------------eCCccceeEEEEcCCCCEEEEEeCCC
Q 010362 345 ------------------------------------------------------RGHSSYVNDAIFTNDGSRVVTASSDC 370 (512)
Q Consensus 345 ------------------------------------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg 370 (512)
.+|...|.+++|+|+++++++++.||
T Consensus 783 ~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg 862 (1249)
T 3sfz_A 783 VKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQY 862 (1249)
T ss_dssp CCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSS
T ss_pred ccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCC
Confidence 16778899999999999999999999
Q ss_pred cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe----------E----------
Q 010362 371 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ----------V---------- 430 (512)
Q Consensus 371 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~----------~---------- 430 (512)
.|++||+.++.....+. +|...|.+++|+|++ ..+++++.|+.+++|+.... .
T Consensus 863 ~v~vwd~~~~~~~~~~~------~h~~~v~~v~~spdg-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1249)
T 3sfz_A 863 CVELWNIDSRLKVADCR------GHLSWVHGVMFSPDG-SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENET 935 (1249)
T ss_dssp CEEEEETTTTEEEEEEC------CCSSCEEEEEECTTS-SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEE
T ss_pred eEEEEEcCCCceeeecC------CCccceEEEEECCCC-CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCc
Confidence 99999999988777765 577899999999987 88999999999999997521 0
Q ss_pred ----------EEEeeCC-----cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCC
Q 010362 431 ----------VKSFSSG-----KREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 495 (512)
Q Consensus 431 ----------~~~~~~~-----~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~ 495 (512)
....... ......+.+++++|+|+++++|+.+|.|++||+.+++....+.+|...|++++|+|++
T Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg 1015 (1249)
T 3sfz_A 936 MVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADG 1015 (1249)
T ss_dssp EEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSS
T ss_pred EEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCC
Confidence 0000000 0123568899999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEECCCeEEEecC
Q 010362 496 NLLATYGEDCTMKLWKP 512 (512)
Q Consensus 496 ~~l~s~~~dg~i~iW~~ 512 (512)
+++++++.||.|++||.
T Consensus 1016 ~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 1016 KTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp SCEEEECSSSBEEEEET
T ss_pred CEEEEEcCCCEEEEEEC
Confidence 99999999999999984
No 64
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.1e-38 Score=295.78 Aligned_cols=279 Identities=15% Similarity=0.212 Sum_probs=236.9
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCC-eEEEEeCCCeEE
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSE-MLASGSQDGKIK 288 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~~dg~i~ 288 (512)
.+|.+.|++++|+|++++|++|+.||.|++||+.++..... ...+.+|...|.+++|+|+++ +|++|+.||.|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD-----LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEE-----EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccc-----ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 38999999999999999999999999999999987652111 123346999999999999999 999999999999
Q ss_pred EEEc-cCCeeeEEeccc--cccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC---------CceeEEeeCCccceeEEEE
Q 010362 289 VWRI-RSGQCLRRLERA--HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS---------GKLLKEFRGHSSYVNDAIF 356 (512)
Q Consensus 289 vwd~-~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~---------~~~~~~~~~~~~~v~~~~~ 356 (512)
+||+ .+++. ..+. . |...|.+++|+| +..+++++.|+.|++||+++ ++++..+. |...|.+++|
T Consensus 83 ~wd~~~~~~~-~~~~-~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 158 (342)
T 1yfq_A 83 KVDLIGSPSF-QALT-NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDT 158 (342)
T ss_dssp EECSSSSSSE-EECB-SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEE
T ss_pred EEEeccCCce-Eecc-ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEe
Confidence 9999 87765 4454 6 999999999999 99999999999999999987 77776666 8889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCC-CceeeecCCCCCCCCCCceeEEEEEcC-CCCCeEEEEcCCCcEEEEecCC------
Q 010362 357 TNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKPPPPLRGGDASVNSVHLFP-KNPDHIVVCNKTSSIYIMTLQG------ 428 (512)
Q Consensus 357 ~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~~~~i~~~~~~~------ 428 (512)
+|++ +++++.||.|++||+++ +....... ...+...+.++.|+| ++ ..+++++.++.+++|+++.
T Consensus 159 ~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 159 NSSR--LIVGMNNSQVQWFRLPLCEDDNGTIE----ESGLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp CSSE--EEEEESTTEEEEEESSCCTTCCCEEE----ECSCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECCTTCCSTT
T ss_pred cCCc--EEEEeCCCeEEEEECCccccccceee----ecCCCCceeEEEECCCCC-CEEEEEecCCcEEEEEEcCCCcccc
Confidence 9987 99999999999999998 54321111 123567899999999 76 8999999999999999873
Q ss_pred -eEEEEeeCCcc------cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecccc-CCCeEEEEEcCCCCeEEE
Q 010362 429 -QVVKSFSSGKR------EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH-EKDVIGVTHHPHRNLLAT 500 (512)
Q Consensus 429 -~~~~~~~~~~~------~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s 500 (512)
.....+..+.. +...+.+++|+|++++|++|+.||.|++||+.+++++..+.+| ...|.+++ |++++|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s 309 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCL 309 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEE
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEE
Confidence 33344433321 2347999999999999999999999999999999999999998 99999999 99999999
Q ss_pred EECCCe
Q 010362 501 YGEDCT 506 (512)
Q Consensus 501 ~~~dg~ 506 (512)
++.||+
T Consensus 310 ~s~Dg~ 315 (342)
T 1yfq_A 310 ATSDDT 315 (342)
T ss_dssp EEECTH
T ss_pred EecCCc
Confidence 999998
No 65
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-36 Score=299.37 Aligned_cols=299 Identities=22% Similarity=0.346 Sum_probs=253.5
Q ss_pred eccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCc
Q 010362 185 LFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE 264 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~ 264 (512)
++.+..+....+|+.........+. +|.+.|++++|+|++ +|++|+.||+|++||+.+++... .+.+|..
T Consensus 135 l~sgs~dg~i~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~--------~~~~h~~ 204 (464)
T 3v7d_B 135 VITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH--------VFEGHNS 204 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEE--------EECCCSS
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEe-CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEE--------EECCCCC
Confidence 3445556677888888888888886 999999999999988 99999999999999999887655 3456999
Q ss_pred ceeEEEEc--CCCCeEEEEeCCCeEEEEEccCCee-----------------------eEEeccccccCeEEEEEecCCC
Q 010362 265 TVLCIEFS--RDSEMLASGSQDGKIKVWRIRSGQC-----------------------LRRLERAHSEGVTSLVFSRDGS 319 (512)
Q Consensus 265 ~v~~l~~s--~~~~~l~s~~~dg~i~vwd~~~~~~-----------------------~~~~~~~~~~~i~~~~~~~~~~ 319 (512)
.|.+++|+ +++.++++|+.||+|++||+.++.. ...+ .+|...+.++ +++++
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~--~~~~~ 281 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL-RGHMASVRTV--SGHGN 281 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE-CCCSSCEEEE--EEETT
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc-cCccceEEEE--cCCCC
Confidence 99999999 5789999999999999999987753 2233 3677778776 57789
Q ss_pred EEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCcee
Q 010362 320 QILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399 (512)
Q Consensus 320 ~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i 399 (512)
++++|+.||.|++||+++++.+..+.+|...|.+++|+|+++++++|+.||.|++||+++++....+. +|...+
T Consensus 282 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~------~h~~~v 355 (464)
T 3v7d_B 282 IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ------GHTALV 355 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe------CCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999888775 567889
Q ss_pred EEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEe-
Q 010362 400 NSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL- 478 (512)
Q Consensus 400 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~- 478 (512)
.++.+++ ..+++++.|+.|++||+.......... +...+..++++++++++++|+ ||.|++||+.+++++..
T Consensus 356 ~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~ 428 (464)
T 3v7d_B 356 GLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHAN 428 (464)
T ss_dssp EEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESC
T ss_pred EEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehh
Confidence 9999974 799999999999999998543222221 234567789999999999998 89999999999999986
Q ss_pred ccccCCCeEEEEEcCCCCeEEEEECCCeEEEe
Q 010362 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510 (512)
Q Consensus 479 ~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW 510 (512)
+..|...|.+++|+ .+.++++++.||.+.+|
T Consensus 429 ~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 429 ILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred hccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 67789999999997 45667777788876655
No 66
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.2e-37 Score=284.61 Aligned_cols=247 Identities=26% Similarity=0.411 Sum_probs=219.9
Q ss_pred cceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeC
Q 010362 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 335 (512)
Q Consensus 256 ~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~ 335 (512)
...+.+|...|++++|+|++++|++|+.||.|++|++.+++....+. .|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc-cCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 34667899999999999999999999999999999999999888886 89999999999999999999999999999999
Q ss_pred CCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEE
Q 010362 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVC 415 (512)
Q Consensus 336 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 415 (512)
++++.+..+.+|...|.++.|+|+++++++++.||.|++||+++++....+. .|..++.++.|+|++ ..++++
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~-~~l~~~ 167 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP------AHSDPVSAVHFNRDG-SLIVSS 167 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTS-SEEEEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec------CCCCcEEEEEEcCCC-CEEEEE
Confidence 9999999999999999999999999999999999999999999998877765 466789999999987 799999
Q ss_pred cCCCcEEEEecCC-eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEE--EEE-
Q 010362 416 NKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG--VTH- 491 (512)
Q Consensus 416 ~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~--v~~- 491 (512)
+.|+.|++||++. .....+... +...+..++|+|+++++++++.||.|++||+.+++.+..+.+|...+.+ ..+
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCS--SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred eCCCcEEEEECCCCceeeEEecc--CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 9999999999984 444444332 3457889999999999999999999999999999999999888765432 234
Q ss_pred cCCCCeEEEEECCCeEEEecC
Q 010362 492 HPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 492 ~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.+++.+|++|+.||.|++||.
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEET
T ss_pred eCCCcEEEEECCCCEEEEEEC
Confidence 367889999999999999984
No 67
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=294.90 Aligned_cols=297 Identities=16% Similarity=0.200 Sum_probs=238.3
Q ss_pred ccCccccceEEEecCcCceEEEEECCC---CCEEEEEeCCCeEEEEEcCC-CeeeccccccccceeeccCcceeEEEEcC
Q 010362 198 DMYPTTLSHTIKFGTKSHAECARFSPD---GQFLVSCSFDGFIEVWDYLS-GKLKKDLQYQADETFMMHDETVLCIEFSR 273 (512)
Q Consensus 198 ~~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 273 (512)
...|....+.+. +|.+.|+|++|+|+ |++|++|+.||.|++||+.+ +... ...+.+|...|.+++|+|
T Consensus 25 ~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~-------~~~~~~h~~~v~~~~~~~ 96 (368)
T 3mmy_A 25 NHNPMKDIEVTS-SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI-------PKAQQMHTGPVLDVCWSD 96 (368)
T ss_dssp SSCTTCCEECSS-CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE-------EEEEEECSSCEEEEEECT
T ss_pred CCCCcceeEecc-CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee-------EEEeccccCCEEEEEECc
Confidence 334444444444 99999999999999 69999999999999999987 3322 124566999999999999
Q ss_pred CCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEE--ecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccce
Q 010362 274 DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVF--SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV 351 (512)
Q Consensus 274 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v 351 (512)
++++|++++.||.|++||+.+++.+... .|...|.+++| +|++.+|++++.||.|++||+++++.+..+..+. .+
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~ 173 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIA--QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RC 173 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeec--cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-Cc
Confidence 9999999999999999999999877644 69999999999 8899999999999999999999999999888765 46
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCC---CCeEEEEcCCCcEEEEecCC
Q 010362 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN---PDHIVVCNKTSSIYIMTLQG 428 (512)
Q Consensus 352 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~~~~i~~~~~~~ 428 (512)
.++.+.+ ..+++++.++.+.+||++........... ........+.+.+.. +..+++++.++.+++|+++.
T Consensus 174 ~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~ 247 (368)
T 3mmy_A 174 YCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIES----PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP 247 (368)
T ss_dssp EEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCC----SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSC
T ss_pred eEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccc----cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCC
Confidence 6666654 57889999999999999876543332211 122334444444432 23499999999999999984
Q ss_pred e----EEEEeeCCcc---------cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCC
Q 010362 429 Q----VVKSFSSGKR---------EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 495 (512)
Q Consensus 429 ~----~~~~~~~~~~---------~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~ 495 (512)
. ....+..+.. +...+.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|++++|+|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 248 PNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNG 327 (368)
T ss_dssp SCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTS
T ss_pred CCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCC
Confidence 3 2333333221 11269999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEECCCeEEEec
Q 010362 496 NLLATYGEDCTMKLWK 511 (512)
Q Consensus 496 ~~l~s~~~dg~i~iW~ 511 (512)
++|++++.|+..+.|+
T Consensus 328 ~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 328 NIFAYASSYDWSKGHE 343 (368)
T ss_dssp SCEEEEECCCSTTCGG
T ss_pred CeEEEEeccccccccc
Confidence 9999999998655543
No 68
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.5e-37 Score=290.74 Aligned_cols=294 Identities=16% Similarity=0.187 Sum_probs=221.9
Q ss_pred EEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcC--CCCeEEEEeCCC
Q 010362 208 IKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSR--DSEMLASGSQDG 285 (512)
Q Consensus 208 ~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~--~~~~l~s~~~dg 285 (512)
+..+|.+.|++++|+|++++||+|+.||.|++||+.++.... .....+.+|...|.+++|+| ++++|++|+.||
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNW----ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCE----EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcc----eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 445999999999999999999999999999999998764321 12235667999999999999 699999999999
Q ss_pred eEEEEEccCC---------eeeEEeccccccCeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCceeEEee---------
Q 010362 286 KIKVWRIRSG---------QCLRRLERAHSEGVTSLVFSRD--GSQILSTSFDSTARIHGLKSGKLLKEFR--------- 345 (512)
Q Consensus 286 ~i~vwd~~~~---------~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~~~~~~~--------- 345 (512)
.|++||+.++ +.+..+. .|...|.+++|+|+ +.++++++.||.|++||+++++.+..+.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred eEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 9999999887 4566665 78999999999999 9999999999999999998887654433
Q ss_pred ----CCccceeEEEEcCC---CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCC---CeEEEE
Q 010362 346 ----GHSSYVNDAIFTND---GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP---DHIVVC 415 (512)
Q Consensus 346 ----~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~l~~~ 415 (512)
.|...+.+++|+|+ +..+++++.|+.+.+|+...+....... ..+|...|.+++|+|++. .+++++
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK----LPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEE----CCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeee----cCCCCcceeEEEECCCCCCcceEEEEE
Confidence 57788999999997 8999999999999888887765422211 235788999999999974 689999
Q ss_pred cCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEE----eCCCeEEEEEcCCCeeEEeccccCCCeEEEEE
Q 010362 416 NKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV----GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491 (512)
Q Consensus 416 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g----~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~ 491 (512)
+.|+.|++||++........... .........++....+..+ ...+.+.+|+..+.+++..+.+|...|++++|
T Consensus 237 ~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 314 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPLASEES--LTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSW 314 (351)
T ss_dssp ETTSCEEEEEEEECC-----------------------------------------CCSEEEEEEEEECTTSSCEEEEEE
T ss_pred cCCCeEEEEeCCCCcCccccCCc--ccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEE
Confidence 99999999999843222111111 1122233334444444333 34456777777778888999999999999999
Q ss_pred cCCCCeEEEEECCCeEEEecC
Q 010362 492 HPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 492 ~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+|++++|++++.||.|++|+.
T Consensus 315 s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 315 NLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp CSSSCCEEEEETTSCEEEEEE
T ss_pred cCCCCEEEEecCCCcEEEEec
Confidence 999999999999999999983
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.1e-36 Score=306.94 Aligned_cols=312 Identities=19% Similarity=0.259 Sum_probs=252.7
Q ss_pred eeccCcccccccccccCccccceEEEecCcC---ceEEEEECCC-CCEEEEEeCCCeEEEEEcCCCeeecccccccccee
Q 010362 184 DLFRGTAAMKQDVEDMYPTTLSHTIKFGTKS---HAECARFSPD-GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETF 259 (512)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 259 (512)
.++.+..+....+|+..+......+. +|.. .|++++|+|+ +++|++|+.||.|++||+.+++....+... .
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~ 249 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDR-THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD----Q 249 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBT----T
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeec-ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccc----c
Confidence 34445555667788888877777776 7888 9999999999 999999999999999999988776544100 0
Q ss_pred eccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccc---cccCeEEEEEecCCCEEEEEeCCCcEEEEeCC
Q 010362 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA---HSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336 (512)
Q Consensus 260 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~ 336 (512)
.+|...|.+++|+ ++.+|++++.||.|++||+.+++.+..+... +...+.++.|. ++.++++++.||.|++||+.
T Consensus 250 ~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 250 EPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp BCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETT
T ss_pred cccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECC
Confidence 1499999999999 9999999999999999999999988887622 24678888886 88999999999999999999
Q ss_pred CCceeEEeeCCccceeEEEEcCC---------------------------------CCEEEEEeCCCcEEEEeCCC----
Q 010362 337 SGKLLKEFRGHSSYVNDAIFTND---------------------------------GSRVVTASSDCTVKVWDLKS---- 379 (512)
Q Consensus 337 ~~~~~~~~~~~~~~v~~~~~~~~---------------------------------~~~l~~~~~dg~i~iwd~~~---- 379 (512)
+++.+..+.+|...|.+++| |+ +..+++++.||.|++||+.+
T Consensus 328 ~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~ 406 (615)
T 1pgu_A 328 HDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFG 406 (615)
T ss_dssp EEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECS
T ss_pred CCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCccc
Confidence 88888888777666666655 43 44555555555555555432
Q ss_pred ----------------------------------------------------------------------CceeeecCCC
Q 010362 380 ----------------------------------------------------------------------TDCLQTFKPP 389 (512)
Q Consensus 380 ----------------------------------------------------------------------~~~~~~~~~~ 389 (512)
+....
T Consensus 407 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~----- 481 (615)
T 1pgu_A 407 SQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF----- 481 (615)
T ss_dssp SCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE-----
T ss_pred CCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc-----
Confidence 21110
Q ss_pred CCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeCCcccCCcEEEEEECC----------CCCEEEE
Q 010362 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSGKREGGDFVAACVSP----------KGEWIYC 458 (512)
Q Consensus 390 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~----------~g~~l~~ 458 (512)
.....+...+.+++|+|++ .++++++.|+.|++|++... ....+.. .+...+.+++|+| ++++|++
T Consensus 482 ~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~ 558 (615)
T 1pgu_A 482 DLKTPLRAKPSYISISPSE-TYIAAGDVMGKILLYDLQSREVKTSRWA--FRTSKINAISWKPAEKGANEEEIEEDLVAT 558 (615)
T ss_dssp ECSSCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEECCSC--CCSSCEEEEEECCCC------CCSCCEEEE
T ss_pred cccCCccCceEEEEECCCC-CEEEEcCCCCeEEEeeCCCCcceeEeec--CCCCceeEEEEcCccccccccccCCCEEEE
Confidence 2234678899999999988 89999999999999999844 4333322 1467899999999 9999999
Q ss_pred EeCCCeEEEEEcCCC-eeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 459 VGEDRNLYCFSHQSG-KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 459 g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
|+.||.|++||+.++ +++..+.+|...|++++|+|++. |++++.||.|++|+.
T Consensus 559 ~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 559 GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred EcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 999999999999998 78899999999999999999999 999999999999983
No 70
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-37 Score=324.57 Aligned_cols=322 Identities=8% Similarity=0.047 Sum_probs=237.9
Q ss_pred eccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccc---c-ceee
Q 010362 185 LFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA---D-ETFM 260 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---~-~~~~ 260 (512)
++.+..+....+|+.......+.+. |.+.|++++|+|++++|++|+.||+|++||+.+++.. .+.... . ..+.
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTVF--VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPA 148 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSS
T ss_pred EEEEECcCeEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccc
Confidence 4444556677889888877777774 7789999999999999999999999999999988753 111100 0 2346
Q ss_pred ccCcceeEEEEcCC-CCeEEEEeCCCeEEEEEccCCeeeEEecc-----------------ccccCeEEEEEecCCCEEE
Q 010362 261 MHDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLER-----------------AHSEGVTSLVFSRDGSQIL 322 (512)
Q Consensus 261 ~h~~~v~~l~~s~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-----------------~~~~~i~~~~~~~~~~~l~ 322 (512)
+|..+|.+++|+|+ +..+++|+.||.| +||+.+++.+..+.. .|...|.+++|+|+|.+|+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 79999999999996 5789999999999 999999998877752 1247799999999999999
Q ss_pred EEeCCCcEEEEeCCCCceeEE--e---eC-------------CccceeEEEEc----CCC-CEEEEEeCC-----CcEEE
Q 010362 323 STSFDSTARIHGLKSGKLLKE--F---RG-------------HSSYVNDAIFT----NDG-SRVVTASSD-----CTVKV 374 (512)
Q Consensus 323 ~~~~dg~v~i~d~~~~~~~~~--~---~~-------------~~~~v~~~~~~----~~~-~~l~~~~~d-----g~i~i 374 (512)
+|+.||.|++||+++++++.. + .. |...|.+++|+ |++ ..+++|+.| +.+.+
T Consensus 228 sgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~ 307 (902)
T 2oaj_A 228 TIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTM 307 (902)
T ss_dssp EEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEE
T ss_pred EEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEE
Confidence 999999999999999887653 2 11 34478999995 333 345555444 25556
Q ss_pred Ee-----------------------------------------------------------------------CCCCcee
Q 010362 375 WD-----------------------------------------------------------------------LKSTDCL 383 (512)
Q Consensus 375 wd-----------------------------------------------------------------------~~~~~~~ 383 (512)
|+ +.++...
T Consensus 308 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~ 387 (902)
T 2oaj_A 308 IDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFT 387 (902)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEE
T ss_pred EecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcc
Confidence 55 2222111
Q ss_pred ee-cCCCCCCCCCCceeEEE----------------------------------EEcCCCCCeEEEEcCCCcEEEEecCC
Q 010362 384 QT-FKPPPPLRGGDASVNSV----------------------------------HLFPKNPDHIVVCNKTSSIYIMTLQG 428 (512)
Q Consensus 384 ~~-~~~~~~~~~~~~~i~~~----------------------------------~~~~~~~~~l~~~~~~~~i~~~~~~~ 428 (512)
.. ...+..+..+...|+++ +++|++ .++++++.|+.|++||+..
T Consensus 388 ~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg-~~laSgs~DgtVrlWd~~~ 466 (902)
T 2oaj_A 388 DKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG-TAFITGHSNGSVRIYDASH 466 (902)
T ss_dssp CCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE-EEEEEEETTSEEEEEESSC
T ss_pred cccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccC-cEEEEecCCCcEEEEECCC
Confidence 00 00000011122334433 445654 7899999999999999974
Q ss_pred eEEE-----Eee----CCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe-------------------------
Q 010362 429 QVVK-----SFS----SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK------------------------- 474 (512)
Q Consensus 429 ~~~~-----~~~----~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~------------------------- 474 (512)
.... ... ....+...|.+++|+|||++|++|+.||+|++||+.+++
T Consensus 467 g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (902)
T 2oaj_A 467 GDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNT 546 (902)
T ss_dssp CTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGS
T ss_pred ccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCC
Confidence 4211 000 011356689999999999999999999999999998762
Q ss_pred --------------------eEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 475 --------------------LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 475 --------------------~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
++..+.+|.+.|++|+|+|+| +||+|+.||+|++||.
T Consensus 547 ~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 547 NGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp SCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 467788899999999999999 9999999999999984
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-35 Score=292.16 Aligned_cols=277 Identities=21% Similarity=0.370 Sum_probs=238.0
Q ss_pred EEEecCcCce-EEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 207 TIKFGTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 207 ~~~~~h~~~v-~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
.+. +|...| .|+.| ++++|++|+.||+|++||+.+++.... +.+|...|.+++|+|++ ++++|+.||
T Consensus 116 ~l~-~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~--------~~~h~~~V~~l~~~~~~-~l~s~s~dg 183 (464)
T 3v7d_B 116 TLR-GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQ--------LSGHDGGVWALKYAHGG-ILVSGSTDR 183 (464)
T ss_dssp EEE-CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEE--------ECCCSSCEEEEEECSTT-EEEEEETTS
T ss_pred EEc-CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEE--------EeCCCcCEEEEEEcCCC-EEEEEeCCC
Confidence 444 777774 66666 567999999999999999999876653 44699999999999988 999999999
Q ss_pred eEEEEEccCCeeeEEeccccccCeEEEEEe--cCCCEEEEEeCCCcEEEEeCCCCce-----------------------
Q 010362 286 KIKVWRIRSGQCLRRLERAHSEGVTSLVFS--RDGSQILSTSFDSTARIHGLKSGKL----------------------- 340 (512)
Q Consensus 286 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~dg~v~i~d~~~~~~----------------------- 340 (512)
+|++||+.+++.+..+. .|...|.+++|+ +++.++++|+.||.|++||++++..
T Consensus 184 ~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp CEEEEETTTTEEEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CEEEEECCCCcEEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 99999999999998887 899999999999 4778999999999999999987653
Q ss_pred eEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCc
Q 010362 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 420 (512)
Q Consensus 341 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~ 420 (512)
+..+.+|...+.++ +++++++++++.||.|++||+++++....+. +|...+.++.++|++ ..+++++.|+.
T Consensus 263 ~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~------~~~~~v~~~~~~~~~-~~l~sg~~dg~ 333 (464)
T 3v7d_B 263 VGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS------GHTDRIYSTIYDHER-KRCISASMDTT 333 (464)
T ss_dssp EEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEEETTT-TEEEEEETTSC
T ss_pred EEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec------CCCCCEEEEEEcCCC-CEEEEEeCCCc
Confidence 45677888888776 5778899999999999999999998887765 567899999999987 89999999999
Q ss_pred EEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEE
Q 010362 421 IYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLA 499 (512)
Q Consensus 421 i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 499 (512)
|++||++ +.....+.. +...+.+++++ +.++++|+.||.|++||+.++....... |...+..++|+|++.+++
T Consensus 334 i~vwd~~~~~~~~~~~~---h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 407 (464)
T 3v7d_B 334 IRIWDLENGELMYTLQG---HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILV 407 (464)
T ss_dssp EEEEETTTTEEEEEECC---CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEE
T ss_pred EEEEECCCCcEEEEEeC---CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEE
Confidence 9999997 555555543 45678889987 6899999999999999999987666553 667788899999999999
Q ss_pred EEECCCeEEEecC
Q 010362 500 TYGEDCTMKLWKP 512 (512)
Q Consensus 500 s~~~dg~i~iW~~ 512 (512)
+|+ ||.|++||.
T Consensus 408 ~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 408 SGS-ENQFNIYNL 419 (464)
T ss_dssp EEE-TTEEEEEET
T ss_pred Eec-CCeEEEEEC
Confidence 998 899999984
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.4e-36 Score=289.56 Aligned_cols=243 Identities=23% Similarity=0.388 Sum_probs=210.7
Q ss_pred ccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccc------------------cCeEEEEEecCCCEEE
Q 010362 261 MHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHS------------------EGVTSLVFSRDGSQIL 322 (512)
Q Consensus 261 ~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~l~ 322 (512)
+|...|.+++|+|||++||+|+ ++++++|++.+++.+..+. .+. ..|.+++|+|++++|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLS-DDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEEC-C-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEec-CccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 4999999999999999999986 7899999999998887765 222 2489999999999999
Q ss_pred EEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEE
Q 010362 323 STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV 402 (512)
Q Consensus 323 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~ 402 (512)
+|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+. +...+.++
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-------~~~~v~~~ 212 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-------IEDGVTTV 212 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------CSSCEEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-------cCCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999998776664 34578999
Q ss_pred EEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeC----CcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC----
Q 010362 403 HLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSS----GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG---- 473 (512)
Q Consensus 403 ~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~---- 473 (512)
+++|.+..++++++.|+.|++||.+. .....+.. ...+...+.+++|+|+|++|++|+.||.|++||+.+.
T Consensus 213 ~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 213 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp EECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 99996669999999999999999984 44444321 1335678999999999999999999999999998753
Q ss_pred --------eeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 474 --------KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 474 --------~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.+...+.+|...|.+++|+|++.+|++|+.||.|++||+
T Consensus 293 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 293 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp --------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred cccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 345667789999999999999999999999999999984
No 73
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-36 Score=294.27 Aligned_cols=269 Identities=22% Similarity=0.380 Sum_probs=236.4
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVW 290 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vw 290 (512)
+|...|.|++| +++++++|+.||.|++||+.+++... .+.+|...|.+++| ++++|++|+.||+|++|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~--------~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vw 198 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKR--------ILTGHTGSVLCLQY--DERVIITGSSDSTVRVW 198 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEE--------EECCCSSCEEEEEC--CSSEEEEEETTSCEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEE--------EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEE
Confidence 67778999887 78999999999999999998887654 34569999999999 78899999999999999
Q ss_pred EccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCcee---EEeeCCccceeEEEEcCCCCEEEEEe
Q 010362 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL---KEFRGHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 291 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
|+.+++.+..+. .|...|.+++|+ +..+++|+.||.|++||++++... ..+.+|...|.+++| +++++++|+
T Consensus 199 d~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~ 273 (435)
T 1p22_A 199 DVNTGEMLNTLI-HHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSAS 273 (435)
T ss_dssp ESSSCCEEEEEC-CCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred ECCCCcEEEEEc-CCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEe
Confidence 999999998887 899999999997 459999999999999999888765 677889999999999 678999999
Q ss_pred CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEE
Q 010362 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVA 446 (512)
Q Consensus 368 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~ 446 (512)
.||.|++||+++++....+. +|...+.++.+. +..+++++.|+.|++||++ +.....+.. +...+.+
T Consensus 274 ~dg~i~vwd~~~~~~~~~~~------~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~ 341 (435)
T 1p22_A 274 GDRTIKVWNTSTCEFVRTLN------GHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRC 341 (435)
T ss_dssp TTSEEEEEETTTCCEEEEEE------CCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEE
T ss_pred CCCeEEEEECCcCcEEEEEc------CCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeC---CcCcEEE
Confidence 99999999999998888765 466788999884 3799999999999999998 555555543 3567888
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCe---------eEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGK---------LEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 447 ~~~s~~g~~l~~g~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+++ ++.++++|+.||.|++||+.++. .+..+.+|.+.|.+++| ++.+|++|+.||+|++||.
T Consensus 342 ~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 342 IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred EEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 888 88999999999999999998776 78889999999999999 7788999999999999984
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=319.62 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=179.5
Q ss_pred EEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCe
Q 010362 207 TIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGK 286 (512)
Q Consensus 207 ~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~ 286 (512)
....+|.+.|+|++|+|++++||+|+.||+|+||+..+.+..... .|...|.+++|+| +++|++++.|++
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~---------~~~~~V~~l~fsp-g~~L~S~s~D~~ 80 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL---------EDRSAIKEMRFVK-GIYLVVINAKDT 80 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC---------SSCCCEEEEEEET-TTEEEEEETTCE
T ss_pred ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc---------CCCCCEEEEEEcC-CCEEEEEECcCe
Confidence 344699999999999999999999999999999998776544322 2788999999999 889999999999
Q ss_pred EEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCcee-----------EEeeCCccceeEEE
Q 010362 287 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL-----------KEFRGHSSYVNDAI 355 (512)
Q Consensus 287 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~-----------~~~~~~~~~v~~~~ 355 (512)
|++||+.+++.+..+. |...|++++|+|+++++++|+.||.|++||+++++.. ..+.+|.++|++++
T Consensus 81 v~lWd~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 81 VYVLSLYSQKVLTTVF--VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp EEEEETTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred EEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 9999999999888875 6789999999999999999999999999999888753 23466889999999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEeCCCCceeeecCCC------------CCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 356 FTND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPP------------PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 356 ~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
|+|+ +..+++|+.||.| +||+++++....+... .....|...|.+++|+|++ .++++++.|+.|+
T Consensus 159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~ 236 (902)
T 2oaj_A 159 WNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLV 236 (902)
T ss_dssp EETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEE
T ss_pred EccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEE
Confidence 9996 4789999999999 9999999888776543 1112345789999999997 8999999999999
Q ss_pred EEecCC
Q 010362 423 IMTLQG 428 (512)
Q Consensus 423 ~~~~~~ 428 (512)
+||++.
T Consensus 237 lWd~~~ 242 (902)
T 2oaj_A 237 FWDANS 242 (902)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999973
No 75
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.3e-35 Score=280.10 Aligned_cols=248 Identities=20% Similarity=0.311 Sum_probs=208.7
Q ss_pred ccceeeccCcceeEEEE-----cC-CCCeEEEEeCCCeEEEEEccCC-------eeeEEeccccccCeEEEEEecCCCEE
Q 010362 255 ADETFMMHDETVLCIEF-----SR-DSEMLASGSQDGKIKVWRIRSG-------QCLRRLERAHSEGVTSLVFSRDGSQI 321 (512)
Q Consensus 255 ~~~~~~~h~~~v~~l~~-----s~-~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l 321 (512)
....+.+|...|++++| ++ ++++|++|+.|++|++||+.++ .....+. +|...|.+++|+|++.++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-GHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-CCSSCEEEEEECSSTTEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc-cCCCceEEEEECCCCCEE
Confidence 34467889999999999 77 8999999999999999999753 3445555 899999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEE
Q 010362 322 LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 401 (512)
Q Consensus 322 ~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~ 401 (512)
++|+.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+.... ..... ....|...+.+
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~---~~~~~~~~v~~ 167 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSA---EKENHSDWVSC 167 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECC---TTTSCSSCEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeee---cccCCCceeee
Confidence 999999999999999999999999999999999999999999999999999999998432 22222 12357788999
Q ss_pred EEEcCCCC---------CeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q 010362 402 VHLFPKNP---------DHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 402 ~~~~~~~~---------~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~ 472 (512)
+.|+|.+. .++++++.|+.|++||........+.. +...+.+++|+|+|++|++|+.||.|++||+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKA---HESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcC---ccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 99999863 689999999999999977666555543 456799999999999999999999999999954
Q ss_pred -CeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 473 -GKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 473 -~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+.....+ .+...|.+++|+|++.+++++ .|+.|++|+.
T Consensus 245 ~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~ 283 (343)
T 2xzm_R 245 LTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNL 283 (343)
T ss_dssp CSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEES
T ss_pred Ccccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEe
Confidence 4444444 355679999999999887654 5788999973
No 76
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-36 Score=287.87 Aligned_cols=247 Identities=21% Similarity=0.313 Sum_probs=207.1
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC--CCeEEEEeCCCeEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD--SEMLASGSQDGKIK 288 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i~ 288 (512)
+|.+.|++++|+|++++||+|+.||.|+|||+..+... ....+.+|...|++++|+|+ +++|++|+.||.|+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK------LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcce------eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 99999999999999999999999999999999743321 12245569999999999987 99999999999999
Q ss_pred EEEccCCe--eeEEeccccccCeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCc--eeEEeeCCccceeEEEEcC----
Q 010362 289 VWRIRSGQ--CLRRLERAHSEGVTSLVFSRD--GSQILSTSFDSTARIHGLKSGK--LLKEFRGHSSYVNDAIFTN---- 358 (512)
Q Consensus 289 vwd~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~---- 358 (512)
+||+.+++ .+..+. .|...|.+++|+|+ +.++++++.||.|++||++++. ....+..|...|.+++|+|
T Consensus 83 iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEcCCCceeEeeeec-CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 99999987 555554 78999999999999 9999999999999999998873 4456678999999999999
Q ss_pred ---------CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe
Q 010362 359 ---------DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ 429 (512)
Q Consensus 359 ---------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 429 (512)
++.++++++.||.|++||++++.......
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------------------------------------------ 199 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE------------------------------------------ 199 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEE------------------------------------------
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE------------------------------------------
Confidence 68999999999999999987643211100
Q ss_pred EEEEeeCCcccCCcEEEEEECCC---CCEEEEEeCCCeEEEEEcCCCe-----eEEeccccCCCeEEEEEcCCCCeEEEE
Q 010362 430 VVKSFSSGKREGGDFVAACVSPK---GEWIYCVGEDRNLYCFSHQSGK-----LEHLMKVHEKDVIGVTHHPHRNLLATY 501 (512)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~s~~---g~~l~~g~~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~l~s~ 501 (512)
..+ ..+...+.+++|+|+ ++++++++.||.|++||+.++. .......|...|++++|+|++++|+++
T Consensus 200 --~~~---~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 274 (379)
T 3jrp_A 200 --STL---EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 274 (379)
T ss_dssp --EEE---CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred --EEE---ecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEe
Confidence 000 113456889999999 8999999999999999999863 223334588899999999999999999
Q ss_pred ECCCeEEEec
Q 010362 502 GEDCTMKLWK 511 (512)
Q Consensus 502 ~~dg~i~iW~ 511 (512)
+.||.|++|+
T Consensus 275 ~~dg~i~iw~ 284 (379)
T 3jrp_A 275 GGDNKVTLWK 284 (379)
T ss_dssp ESSSSEEEEE
T ss_pred cCCCcEEEEe
Confidence 9999999997
No 77
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.1e-35 Score=286.01 Aligned_cols=269 Identities=26% Similarity=0.476 Sum_probs=233.9
Q ss_pred cCcCce-EEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 211 GTKSHA-ECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 211 ~h~~~v-~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
+|.+.| +|+ +++|++|++|+.||+|++||+.+++.... +.+|...|.+++|+ ++++++|+.||+|++
T Consensus 116 ~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~~~~~--------~~~h~~~v~~~~~~--~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 116 GHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRT--------LVGHTGGVWSSQMR--DNIIISGSTDRTLKV 183 (445)
T ss_dssp CSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCCEEEE--------CCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred ccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCcEEEE--------EcCCCCCEEEEEec--CCEEEEEeCCCeEEE
Confidence 788765 554 45689999999999999999998876654 44699999999998 569999999999999
Q ss_pred EEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCC
Q 010362 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369 (512)
Q Consensus 290 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 369 (512)
||+.+++.+..+. .|...|.++.|+ ++.+++|+.||.|++||+++++.+..+.+|...|.++.| +++++++++.|
T Consensus 184 wd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 258 (445)
T 2ovr_B 184 WNAETGECIHTLY-GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD 258 (445)
T ss_dssp EETTTTEEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT
T ss_pred EECCcCcEEEEEC-CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC
Confidence 9999999998887 899999999996 568999999999999999999999999999999999999 67899999999
Q ss_pred CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEE
Q 010362 370 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAAC 448 (512)
Q Consensus 370 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 448 (512)
|.|++||+++++....+. +|...+.++.+ +...+++++.|+.|++||++ +.....+.. +...+.++.
T Consensus 259 g~i~iwd~~~~~~~~~~~------~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~ 326 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQ------GHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTG---HQSLTSGME 326 (445)
T ss_dssp SCEEEEEGGGTEEEEEEC------CCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECC---CCSCEEEEE
T ss_pred CEEEEEECCCCcEeEEec------CCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcC---CcccEEEEE
Confidence 999999999998887765 46678999998 34889999999999999998 445544443 344566665
Q ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccc---cCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV---HEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 449 ~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+ +++++++|+.||.|++||+.+++.+..+.. |...|.+++|+ ++++++|+.||.|++||.
T Consensus 327 ~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 327 L--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp E--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred E--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 5 678999999999999999999999988876 88899999995 579999999999999984
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-35 Score=285.01 Aligned_cols=275 Identities=19% Similarity=0.240 Sum_probs=228.1
Q ss_pred cCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcce
Q 010362 187 RGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETV 266 (512)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v 266 (512)
.+.......+|+.........+...|...|++++|+|++++|++|+.||.|++||+.+++.... +.+|...|
T Consensus 108 ~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~--------~~~~~~~v 179 (401)
T 4aez_A 108 AVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT--------MAGHQARV 179 (401)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--------ECCCSSCE
T ss_pred EEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE--------ecCCCCce
Confidence 3445556778888888888888877999999999999999999999999999999998876553 34599999
Q ss_pred eEEEEcCCCCeEEEEeCCCeEEEEEccC-CeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee
Q 010362 267 LCIEFSRDSEMLASGSQDGKIKVWRIRS-GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR 345 (512)
Q Consensus 267 ~~l~~s~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~ 345 (512)
.+++|+ +++|++|+.||.|++||+.. +..+..+. .|...|.+++|+|++++|++|+.||.|++||+++++.+..+.
T Consensus 180 ~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 256 (401)
T 4aez_A 180 GCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT 256 (401)
T ss_dssp EEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC
T ss_pred EEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec
Confidence 999994 57999999999999999984 55566665 899999999999999999999999999999999999999999
Q ss_pred CCccceeEEEEcCCCC-EEEEEe--CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEE--EcCCCc
Q 010362 346 GHSSYVNDAIFTNDGS-RVVTAS--SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV--CNKTSS 420 (512)
Q Consensus 346 ~~~~~v~~~~~~~~~~-~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~--~~~~~~ 420 (512)
.|...|.+++|+|++. .+++++ .||.|++||+++++....+. +...+.+++|+|++ ..+++ ++.++.
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-------~~~~v~~~~~s~~~-~~l~~~~g~~dg~ 328 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-------AGSQVTSLIWSPHS-KEIMSTHGFPDNN 328 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-------CSSCEEEEEECSSS-SEEEEEECTTTCE
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-------CCCcEEEEEECCCC-CeEEEEeecCCCc
Confidence 9999999999999765 555554 69999999999998888775 34579999999998 56666 458999
Q ss_pred EEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecc
Q 010362 421 IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480 (512)
Q Consensus 421 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~ 480 (512)
+++|++.............+...+.+++|+|+|++|++++.||.|++|++.+++.+....
T Consensus 329 i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 329 LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred EEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 999999864333333223356779999999999999999999999999999988776543
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-36 Score=293.39 Aligned_cols=282 Identities=16% Similarity=0.212 Sum_probs=231.2
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcC-CCCeEEEEeCCCeEEEEEc
Q 010362 215 HAECARFSPDGQFLV-SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIKVWRI 292 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~vwd~ 292 (512)
...+++++|+...++ +|+.||.|+||++....... .....+.+|...|.+++|+| ++++|++|+.||+|++||+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~----~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~ 111 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD----KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEI 111 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC----TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEEC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC----CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEc
Confidence 345688999876544 57889999999986543321 12234667999999999999 9999999999999999999
Q ss_pred cCC-------eeeEEeccccccCeEEEEEecCC-CEEEEEeCCCcEEEEeCCCCceeEEe--eCCccceeEEEEcCCCCE
Q 010362 293 RSG-------QCLRRLERAHSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKSGKLLKEF--RGHSSYVNDAIFTNDGSR 362 (512)
Q Consensus 293 ~~~-------~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 362 (512)
.++ +.+..+. +|...|.+++|+|++ .+|++++.||.|++||+++++.+..+ ..|...|.+++|+|++++
T Consensus 112 ~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 112 PDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp CTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred cCCCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence 988 5566665 899999999999998 69999999999999999999999999 789999999999999999
Q ss_pred EEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCc-eeEEEEEcCCCCCeEEEE---cCCCcEEEEecCCeE--EEEeeC
Q 010362 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDA-SVNSVHLFPKNPDHIVVC---NKTSSIYIMTLQGQV--VKSFSS 436 (512)
Q Consensus 363 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~~~---~~~~~i~~~~~~~~~--~~~~~~ 436 (512)
|++++.||.|++||+++++....+.. .+.. .+.++.|+|++ .+++++ +.++.|++||++... ......
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 264 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDR-----PHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKHLEEPLSLQEL 264 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEC-----SSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTBCSSCSEEEEC
T ss_pred EEEEecCCcEEEEeCCCCceeeeecc-----CCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCccccCCceEEec
Confidence 99999999999999999988777621 2333 47899999986 788888 799999999998422 222221
Q ss_pred CcccCCcEEEEEECCCCCEEEE-EeCCCeEEEEEcCCCee-EEeccc--cCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 437 GKREGGDFVAACVSPKGEWIYC-VGEDRNLYCFSHQSGKL-EHLMKV--HEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 437 ~~~~~~~~~~~~~s~~g~~l~~-g~~dg~i~iwd~~~~~~-~~~~~~--h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
.+...+..++|+|+++++++ |+.||.|++||+.+++. +..+.. |...|.+++|+|++.++++ .|+.+++|+
T Consensus 265 --~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 265 --DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp --CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred --cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEE
Confidence 13456889999999999975 55799999999998874 444444 4589999999999998875 577999997
No 80
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-34 Score=299.68 Aligned_cols=270 Identities=23% Similarity=0.362 Sum_probs=219.5
Q ss_pred eeccCcccccccccccCccc-----cceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccce
Q 010362 184 DLFRGTAAMKQDVEDMYPTT-----LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADET 258 (512)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~ 258 (512)
.++.+..+....+|+..... ..+.+ .+|...|.+++|+|+|++|++|+.||+|+|||+.++.... .
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~-~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~--------~ 467 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR--------R 467 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--------E
T ss_pred EEEEEeCCCcEEEEEccCCCccccccccee-cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCccee--------E
Confidence 34455556667778765432 22334 4999999999999999999999999999999999887654 4
Q ss_pred eeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEec--cccccCeEEEEEecCC--CEEEEEeCCCcEEEEe
Q 010362 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLVFSRDG--SQILSTSFDSTARIHG 334 (512)
Q Consensus 259 ~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~~i~~~~~~~~~--~~l~~~~~dg~v~i~d 334 (512)
+.+|...|.+++|+|++++|++|+.|++|++||+.......... .+|...|.+++|+|++ ..+++|+.|+.|++||
T Consensus 468 ~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd 547 (694)
T 3dm0_A 468 FVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 547 (694)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred EeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEE
Confidence 55699999999999999999999999999999986554332221 3678889999999986 6899999999999999
Q ss_pred CCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEE
Q 010362 335 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 414 (512)
Q Consensus 335 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 414 (512)
+++++....+.+|.+.|++++|+|++++|++++.||+|++||+++++.+..+. +...+.+++|+|++ .+++
T Consensus 548 ~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~sp~~-~~l~- 618 (694)
T 3dm0_A 548 LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-------ANSVIHALCFSPNR-YWLC- 618 (694)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-------CSSCEEEEEECSSS-SEEE-
T ss_pred CCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-------CCCcEEEEEEcCCC-cEEE-
Confidence 99999999999999999999999999999999999999999999998877654 34579999999986 4444
Q ss_pred EcCCCcEEEEecCCe-EEEEeeCCc----------------ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Q 010362 415 CNKTSSIYIMTLQGQ-VVKSFSSGK----------------REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 415 ~~~~~~i~~~~~~~~-~~~~~~~~~----------------~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~ 471 (512)
++.++.|++||++.. .+..+.... .+...+.+++|+|+|++|++|+.||.|++|++.
T Consensus 619 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 619 AATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 455677999999854 333332211 011236789999999999999999999999975
No 81
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-34 Score=284.23 Aligned_cols=290 Identities=13% Similarity=0.129 Sum_probs=232.1
Q ss_pred cCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe---eeccccccc----------------------------------
Q 010362 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGK---LKKDLQYQA---------------------------------- 255 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~---~~~~~~~~~---------------------------------- 255 (512)
..++.|++|+|+|++|++++ ++.|++||+.+++ ....+....
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 35789999999999777664 8899999999887 433322110
Q ss_pred ------------cceeeccCcceeEEEEcCCCCeE-EEEeCCCeEEEEEcc--CCeeeEEecc-ccccCeEEEEEecCCC
Q 010362 256 ------------DETFMMHDETVLCIEFSRDSEML-ASGSQDGKIKVWRIR--SGQCLRRLER-AHSEGVTSLVFSRDGS 319 (512)
Q Consensus 256 ------------~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i~vwd~~--~~~~~~~~~~-~~~~~i~~~~~~~~~~ 319 (512)
.....+|...|.+++|+|++++| ++|+.||.|++||+. +++.+..+.. .+...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 01122466689999999999996 899999999999999 8887777652 4678899999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCceeE----EeeCCccceeEEEEcCC---CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCC
Q 010362 320 QILSTSFDSTARIHGLKSGKLLK----EFRGHSSYVNDAIFTND---GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL 392 (512)
Q Consensus 320 ~l~~~~~dg~v~i~d~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 392 (512)
+|++|+.+|.|++|++.+++... .+.+|...|++++|+|+ +++|++++.|+.|++||++++.....+.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~----- 237 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL----- 237 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC-----
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee-----
Confidence 99999999999999998877554 77889999999999999 9999999999999999999888766642
Q ss_pred CCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCc----------------------ccCCcEEEEEE
Q 010362 393 RGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK----------------------REGGDFVAACV 449 (512)
Q Consensus 393 ~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~----------------------~~~~~~~~~~~ 449 (512)
.+|...|.+++|+ ++ .++++++.|+.|++||+. +.....+.... .....+..+++
T Consensus 238 ~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp CCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred cCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 3577899999999 44 899999999999999998 44455443211 22356889999
Q ss_pred CCCCCEEEEEe-CCCeEEEEEc--CCC---eeEEeccccCCCeEEEEEcCCCCeEEEEEC------CCeEEEec
Q 010362 450 SPKGEWIYCVG-EDRNLYCFSH--QSG---KLEHLMKVHEKDVIGVTHHPHRNLLATYGE------DCTMKLWK 511 (512)
Q Consensus 450 s~~g~~l~~g~-~dg~i~iwd~--~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~------dg~i~iW~ 511 (512)
+|+++++++++ .++.|++|++ .++ +.+..+..| +.|.+++|+|++.++++++. +..|.+|.
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIE 388 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEE
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEE
Confidence 99999999999 8999999999 666 677778877 88999999996434433332 45578774
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.3e-34 Score=305.61 Aligned_cols=302 Identities=20% Similarity=0.275 Sum_probs=251.5
Q ss_pred CcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCccee
Q 010362 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL 267 (512)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~ 267 (512)
+.......+|+.........+. +|.+.|++++|+|+|++|++|+.||.|++||+.+++.... +.+|...|+
T Consensus 31 ~~~~g~v~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~--------~~~~~~~v~ 101 (814)
T 3mkq_A 31 TLYSGRVEIWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD--------FEAHPDYIR 101 (814)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE--------EECCSSCEE
T ss_pred EeCCCEEEEEECCCCceEEEEe-cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE--------EecCCCCEE
Confidence 3344567788888887778776 8999999999999999999999999999999998876553 445999999
Q ss_pred EEEEcCCCCeEEEEeCCCeEEEEEccCC-eeeEEeccccccCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeEEee
Q 010362 268 CIEFSRDSEMLASGSQDGKIKVWRIRSG-QCLRRLERAHSEGVTSLVFSR-DGSQILSTSFDSTARIHGLKSGKLLKEFR 345 (512)
Q Consensus 268 ~l~~s~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~~~~~~ 345 (512)
+++|+|++++|++++.||+|++||+.++ .....+. .|...|.+++|+| ++..+++++.||.|++||+.++.....+.
T Consensus 102 ~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 180 (814)
T 3mkq_A 102 SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180 (814)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEE
T ss_pred EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEe
Confidence 9999999999999999999999999987 5555554 8999999999999 88999999999999999999888877777
Q ss_pred CCc-cceeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 346 GHS-SYVNDAIFTN--DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 346 ~~~-~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
.+. ..+.+++|+| ++.++++++.||.|++||+++++....+. +|...+.+++|+|++ ..+++++.||.|+
T Consensus 181 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~------~~~~~v~~~~~~~~~-~~l~~~~~dg~v~ 253 (814)
T 3mkq_A 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE------GHMSNVSFAVFHPTL-PIIISGSEDGTLK 253 (814)
T ss_dssp CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE------CCSSCEEEEEECSSS-SEEEEEETTSCEE
T ss_pred cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc------CCCCCEEEEEEcCCC-CEEEEEeCCCeEE
Confidence 654 7899999999 99999999999999999999988877765 466789999999988 7999999999999
Q ss_pred EEecCC-eEEEEeeCCcccCCcEEEEEECCCCC--EEEEEeCCCeEEEEEcCCCe----------eEE------------
Q 010362 423 IMTLQG-QVVKSFSSGKREGGDFVAACVSPKGE--WIYCVGEDRNLYCFSHQSGK----------LEH------------ 477 (512)
Q Consensus 423 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~--~l~~g~~dg~i~iwd~~~~~----------~~~------------ 477 (512)
+||... .....+.. +...+.+++|+|+|. +++++ .++.+.+|++..+. .+.
T Consensus 254 vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 329 (814)
T 3mkq_A 254 IWNSSTYKVEKTLNV---GLERSWCIATHPTGRKNYIASG-FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIF 329 (814)
T ss_dssp EEETTTCSEEEEECC---SSSSEEEEEECTTCGGGEEEEE-ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEE
T ss_pred EEECCCCcEEEEeec---CCCcEEEEEEccCCCceEEEEE-eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeee
Confidence 999984 44444433 245799999999997 45444 46678888865432 111
Q ss_pred ---------------------eccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 478 ---------------------LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 478 ---------------------~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
.+..+...+.+++|+|+++++++++ ||.+.+|+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~ 383 (814)
T 3mkq_A 330 TAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYT 383 (814)
T ss_dssp EEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred eeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEE
Confidence 1122444678999999999999888 88999997
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-36 Score=298.69 Aligned_cols=247 Identities=13% Similarity=0.090 Sum_probs=197.8
Q ss_pred cCcCceEEEEECCCC---------CEEEE-------------------EeCCCeEEEEEcCCCeeeccccccccceeecc
Q 010362 211 GTKSHAECARFSPDG---------QFLVS-------------------CSFDGFIEVWDYLSGKLKKDLQYQADETFMMH 262 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~---------~~l~s-------------------g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h 262 (512)
.+.+.|.+++|+|++ ++||+ |+.||+|+|||+.+++.... ....+.+|
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~----~~~~l~~~ 206 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCV----KVQTIVHS 206 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEE----EEEEEEEC
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCce----EEEEEEec
Confidence 467788888888876 56666 45788999999987653211 11234567
Q ss_pred CcceeEEEEcCC------CCeEEEEeCCCeEEEEEccCCeee-----------EEeccccccCeEEEEEecCCCEEEEEe
Q 010362 263 DETVLCIEFSRD------SEMLASGSQDGKIKVWRIRSGQCL-----------RRLERAHSEGVTSLVFSRDGSQILSTS 325 (512)
Q Consensus 263 ~~~v~~l~~s~~------~~~l~s~~~dg~i~vwd~~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~l~~~~ 325 (512)
.+.|.+++|+|+ +.+||+++.||+|++||+.++... ..+. +|...|++++|+|+ ..|++|+
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~-~h~~~v~sv~~s~~-~~lasgs 284 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS-LADSLITTFDFLSP-TTVVCGF 284 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC-CTTTCEEEEEESSS-SEEEEEE
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE-cCCCCEEEEEecCC-CeEEEEe
Confidence 889999999996 579999999999999999876421 2443 68899999999986 4899999
Q ss_pred CCCcEEEEeCCCCc-eeEEeeCCccceeEE--EEcCCC-CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEE
Q 010362 326 FDSTARIHGLKSGK-LLKEFRGHSSYVNDA--IFTNDG-SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 401 (512)
Q Consensus 326 ~dg~v~i~d~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~ 401 (512)
.||+|++||++++. +...+.+|...|+++ .|+|++ .+|++++.||+|++||++++++...+...
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~------------ 352 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR------------ 352 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE------------
T ss_pred CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc------------
Confidence 99999999998764 456688999999999 568887 89999999999999999876543322100
Q ss_pred EEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccc
Q 010362 402 VHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV 481 (512)
Q Consensus 402 ~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 481 (512)
.....+.+++|+|+++.+++++.|+.|++||++++.++..+.+
T Consensus 353 -------------------------------------~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g 395 (524)
T 2j04_B 353 -------------------------------------FRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS 395 (524)
T ss_dssp -------------------------------------CSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE
T ss_pred -------------------------------------cccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec
Confidence 0011256789999999999999999999999999998888889
Q ss_pred cCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 482 HEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 482 h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
|.+.|++|+|+|++++|++|+.||+|++||+
T Consensus 396 H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 396 RETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp CSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred CCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 9999999999999999999999999999985
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.3e-34 Score=268.93 Aligned_cols=272 Identities=24% Similarity=0.397 Sum_probs=226.4
Q ss_pred eccCcccccccccccCccc-----cceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeecccccccccee
Q 010362 185 LFRGTAAMKQDVEDMYPTT-----LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETF 259 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 259 (512)
++.+..+....+|+..... +.+.+ .+|...|.+++|+|+|++|++|+.||.|++|+..........
T Consensus 54 l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~-------- 124 (340)
T 4aow_A 54 ILSASRDKTIIMWKLTRDETNYGIPQRAL-RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-------- 124 (340)
T ss_dssp EEEEETTSCEEEEEECCSSSCSEEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--------
T ss_pred EEEEcCCCeEEEEECCCCCcccceeeEEE-eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeee--------
Confidence 4445556667788765543 23344 389999999999999999999999999999999887655433
Q ss_pred eccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCC--CEEEEEeCCCcEEEEeCCC
Q 010362 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG--SQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 260 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~v~i~d~~~ 337 (512)
..+...+..+.+++++.+|++++.|+.+++||+............|...+..++|++++ ..+++++.|+.|++||+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~ 204 (340)
T 4aow_A 125 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 204 (340)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT
T ss_pred cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC
Confidence 33778899999999999999999999999999987766655555889999999999864 5788999999999999999
Q ss_pred CceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC
Q 010362 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417 (512)
Q Consensus 338 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 417 (512)
++.+..+.+|...|++++|+|++++|++|+.||.|++||+++.+.+..+. +...+.++.++|++ .+++++.
T Consensus 205 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~--~~~~~~~ 275 (340)
T 4aow_A 205 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD-------GGDIINALCFSPNR--YWLCAAT 275 (340)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-------CSSCEEEEEECSSS--SEEEEEE
T ss_pred CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec-------CCceEEeeecCCCC--ceeeccC
Confidence 99999999999999999999999999999999999999999998887765 33578999999874 5677778
Q ss_pred CCcEEEEecCCeEE-EEeeC------CcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe
Q 010362 418 TSSIYIMTLQGQVV-KSFSS------GKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 418 ~~~i~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~ 474 (512)
|+.|++||+++... ..+.. ...+...|.+++|+|+|++|++|+.||.|++||+.+|+
T Consensus 276 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 276 GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 99999999985433 33221 22356789999999999999999999999999999885
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.3e-34 Score=273.08 Aligned_cols=272 Identities=16% Similarity=0.216 Sum_probs=226.2
Q ss_pred CcccccccccccCccc--cceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcc
Q 010362 188 GTAAMKQDVEDMYPTT--LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265 (512)
Q Consensus 188 ~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~ 265 (512)
+.......+|+..... ....+. +|...|.+++|+|++++|++|+.||.|++||+.+++..... .+..|...
T Consensus 26 ~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~------~~~~~~~~ 98 (372)
T 1k8k_C 26 CPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL------VILRINRA 98 (372)
T ss_dssp ECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE------ECCCCSSC
T ss_pred EeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE------EeecCCCc
Confidence 3345566677776665 566665 89999999999999999999999999999999887644332 23448899
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEccCCee---eEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeC-------
Q 010362 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQC---LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL------- 335 (512)
Q Consensus 266 v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~------- 335 (512)
|.+++|+|++++|++++.||.|++||+.++.. ...+...|...|.+++|+|++++|++++.||.|++||+
T Consensus 99 v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 178 (372)
T 1k8k_C 99 ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEE 178 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSC
T ss_pred eeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccc
Confidence 99999999999999999999999999998762 44454578899999999999999999999999999995
Q ss_pred -----------CCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEE
Q 010362 336 -----------KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHL 404 (512)
Q Consensus 336 -----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 404 (512)
..++.+..+..|...|.+++|+|++++|++++.||.|++||+++++....+. .+..++.+++|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~~~v~~~~~ 252 (372)
T 1k8k_C 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA------SETLPLLAVTF 252 (372)
T ss_dssp CCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE------CSSCCEEEEEE
T ss_pred cccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc------cCCCCeEEEEE
Confidence 4678888898999999999999999999999999999999999998887775 45678999999
Q ss_pred cCCCCCeEEEEcCCCcEEEEecCC--eEEEE-------------------------------------eeCCcccCCcEE
Q 010362 405 FPKNPDHIVVCNKTSSIYIMTLQG--QVVKS-------------------------------------FSSGKREGGDFV 445 (512)
Q Consensus 405 ~~~~~~~l~~~~~~~~i~~~~~~~--~~~~~-------------------------------------~~~~~~~~~~~~ 445 (512)
+|++ .+++++ .++.+++|++.. ..... ......+...|.
T Consensus 253 ~~~~-~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 330 (372)
T 1k8k_C 253 ITES-SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVS 330 (372)
T ss_dssp EETT-EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEE
T ss_pred ecCC-CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcc
Confidence 9987 566666 999999999976 32111 111124677899
Q ss_pred EEEEC-CCC---CEEEEEeCCCeEEEEEcCCCe
Q 010362 446 AACVS-PKG---EWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 446 ~~~~s-~~g---~~l~~g~~dg~i~iwd~~~~~ 474 (512)
+++|. ++| .+|++|+.||.|++||+.+++
T Consensus 331 ~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 331 QISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred eeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 99865 777 999999999999999998754
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-35 Score=284.90 Aligned_cols=243 Identities=11% Similarity=0.110 Sum_probs=201.0
Q ss_pred eccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC--eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC
Q 010362 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG--QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 260 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 337 (512)
..+..+|++++|+|++++|++|+.||.|++||+.++ +.+..+. .|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 347789999999999999999999999999999988 6667775 8999999999999999999999999999999998
Q ss_pred Cc---eeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce---eeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 338 GK---LLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC---LQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 338 ~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
++ ....+.+|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. .|...|.+++|+|++ .+
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~-~~ 160 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR-----PLRSTILSLDWHPNN-VL 160 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS-----SCCSCEEEEEECTTS-SE
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec-----ccCCCeEEEEEcCCC-CE
Confidence 77 6777888999999999999999999999999999999998763 333331 277899999999987 89
Q ss_pred EEEEcCCCcEEEEecCCe----------------EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCee
Q 010362 412 IVVCNKTSSIYIMTLQGQ----------------VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKL 475 (512)
Q Consensus 412 l~~~~~~~~i~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~ 475 (512)
+++++.|+.+++||+... ........ .+...+.+++|+|+|++|++++.||.|++||+.+++.
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 999999999999998511 11112222 4677899999999999999999999999999999887
Q ss_pred ----EEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEe
Q 010362 476 ----EHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510 (512)
Q Consensus 476 ----~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW 510 (512)
+..+.+|...|.+++|+|++++|++++.|+.+.+|
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~ 278 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQ 278 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEEC
T ss_pred cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEE
Confidence 78889999999999999999999999877766444
No 87
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-36 Score=285.88 Aligned_cols=264 Identities=9% Similarity=0.028 Sum_probs=212.7
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVW 290 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vw 290 (512)
.-...|.+++|||||+++|+++.|++|+ |...++ .+.+|...|.+++|+|+| .++.+.+|
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~-----------~l~gh~~~v~~V~FsPdg-------~~~~~~~~ 72 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK-----------DINCNSKNLFHVKEFPLE-------FENKLDFE 72 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS-----------CCSSBGGGTEEEEEECCC-------CCCTTTTS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccc-----------eecCCCccEEEEEECCCC-------CcceEEEE
Confidence 4457899999999999999999999999 643332 224699999999999998 45555555
Q ss_pred EccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCcc-----ceeEEEEcCCCCEEEE
Q 010362 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS-----YVNDAIFTNDGSRVVT 365 (512)
Q Consensus 291 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~ 365 (512)
+ ++....+...|...|.+++|+|+|..||+++.||.|++||..+ .+..+. |.. .|.+++|+|+|++|++
T Consensus 73 ~---~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAs 146 (588)
T 2j04_A 73 L---AQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVV 146 (588)
T ss_dssp C---CCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEE
T ss_pred e---CCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEE
Confidence 5 3332333334688999999999999999999999999999543 666666 665 4999999999999999
Q ss_pred EeCCCcEEEEeCCCCce-------eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEE----EEe
Q 010362 366 ASSDCTVKVWDLKSTDC-------LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV----KSF 434 (512)
Q Consensus 366 ~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~----~~~ 434 (512)
|+.||+|++||+.++.. +.++.... .+|...|.+++|+|++ +++++.|+.+++|++.++.. ..+
T Consensus 147 gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~--~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 147 GNEDGELQFFSIRKNSENTPEFYFESSIRLSD--AGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp EETTSEEEEEECCCCTTTCCCCEEEEEEECSC--TTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred EcCCCEEEEEECCCCccccccceeeeeeeccc--ccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeee
Confidence 99999999999998753 33432222 3577899999999986 88899999999999986542 223
Q ss_pred eCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEE--cCCCCeEEEEECCCeEEEec
Q 010362 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH--HPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 435 ~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~--~p~~~~l~s~~~dg~i~iW~ 511 (512)
... +...|.+++|+ |+.|++++ +|.|++||+.+++......+|.+.|..++| +|++..+++++.||+ ++|.
T Consensus 222 ~~~--h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 222 QNA--SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp ECC--CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred ccc--ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 222 34678899999 68999887 699999999998885444479999999999 999999999999999 9996
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-34 Score=275.73 Aligned_cols=271 Identities=13% Similarity=0.246 Sum_probs=219.2
Q ss_pred ccccccccccCccccceEEEe----cCcCceEEEEECCC----CCEEEEEeCCCeEEEEEcCCCeeeccccccccceeec
Q 010362 190 AAMKQDVEDMYPTTLSHTIKF----GTKSHAECARFSPD----GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261 (512)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~s~~----~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 261 (512)
......+|+.........+.. .|...|++++|+|+ |++|++|+.||.|++||+.+++... .+.+
T Consensus 42 ~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~--------~~~~ 113 (366)
T 3k26_A 42 GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIK--------HYVG 113 (366)
T ss_dssp ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEE--------EEES
T ss_pred CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEee--------eecC
Confidence 334667787776666555542 26688999999999 6799999999999999999887654 3456
Q ss_pred cCcceeEEEEcC-CCCeEEEEeCCCeEEEEEccCCeeeEEec--cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC
Q 010362 262 HDETVLCIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLE--RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338 (512)
Q Consensus 262 h~~~v~~l~~s~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~ 338 (512)
|...|.+++|+| ++++|++|+.||.|++||+.+++.+..+. ..|...|.+++|+|++++|++++.||.|++||++++
T Consensus 114 ~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 114 HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCC
Confidence 999999999999 99999999999999999999999888873 378999999999999999999999999999999877
Q ss_pred ceeEEee----------------------------CCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCC--
Q 010362 339 KLLKEFR----------------------------GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP-- 388 (512)
Q Consensus 339 ~~~~~~~----------------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-- 388 (512)
+....+. .|...|.+++|+ ++++++++.||.|++||++++........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 271 (366)
T 3k26_A 194 RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPS 271 (366)
T ss_dssp HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTT
T ss_pred ccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccC
Confidence 6544333 388999999998 67999999999999999988754111100
Q ss_pred ------CCCCCCCCceeEEEEEcCCC-CCeEEEEcCCCcEEEEecCCe-----EEEEeeCCcccCCcEEEEEECCCCCEE
Q 010362 389 ------PPPLRGGDASVNSVHLFPKN-PDHIVVCNKTSSIYIMTLQGQ-----VVKSFSSGKREGGDFVAACVSPKGEWI 456 (512)
Q Consensus 389 ------~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~g~~l 456 (512)
......+...+.+++|+|+. ..++++++.++.|++||+... ....+. ...+...+.+++|+|++++|
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l 350 (366)
T 3k26_A 272 ESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT-HHKCGAAIRQTSFSRDSSIL 350 (366)
T ss_dssp CCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC-CTTCCSCEEEEEECTTSSEE
T ss_pred CcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc-ccccCCceEEEEeCCCCCeE
Confidence 01122456678889999982 389999999999999999843 222333 22236789999999999999
Q ss_pred EEEeCCCeEEEEEcC
Q 010362 457 YCVGEDRNLYCFSHQ 471 (512)
Q Consensus 457 ~~g~~dg~i~iwd~~ 471 (512)
++++.||.|++||+.
T Consensus 351 ~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 351 IAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEeCCCEEEEEEec
Confidence 999999999999985
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.8e-34 Score=277.04 Aligned_cols=284 Identities=16% Similarity=0.177 Sum_probs=229.0
Q ss_pred eccCcccccccccccCccc------cceEEEecCcCceEEEEECCC----C---CEEEEEeCCCeEEEEEcCCCeeeccc
Q 010362 185 LFRGTAAMKQDVEDMYPTT------LSHTIKFGTKSHAECARFSPD----G---QFLVSCSFDGFIEVWDYLSGKLKKDL 251 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~h~~~v~~~~~s~~----~---~~l~sg~~dg~i~iwd~~~~~~~~~~ 251 (512)
++.+..+....+|+..... ....+. +|...|.+++|+|+ | ++|++|+.||.|++||+.+++.....
T Consensus 29 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 107 (397)
T 1sq9_A 29 TVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV 107 (397)
T ss_dssp EEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCE
T ss_pred EEEEcCCCEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccc
Confidence 3344445566777776665 566665 89999999999999 9 99999999999999999877641100
Q ss_pred cccccceeecc-----CcceeEEEEc----CCCCe-EEEEeCCCeEEEEEccC------CeeeE-----Eec------cc
Q 010362 252 QYQADETFMMH-----DETVLCIEFS----RDSEM-LASGSQDGKIKVWRIRS------GQCLR-----RLE------RA 304 (512)
Q Consensus 252 ~~~~~~~~~~h-----~~~v~~l~~s----~~~~~-l~s~~~dg~i~vwd~~~------~~~~~-----~~~------~~ 304 (512)
....+..| ...|.+++|+ |++++ |++++.||.|++||+.+ ++.+. .+. ..
T Consensus 108 ---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (397)
T 1sq9_A 108 ---IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT 184 (397)
T ss_dssp ---EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS
T ss_pred ---cceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccC
Confidence 01234446 5899999999 99999 99999999999999998 66655 553 24
Q ss_pred cccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeC---C---ccceeEEEEcCCCCEEEEEeCC---CcEEEE
Q 010362 305 HSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG---H---SSYVNDAIFTNDGSRVVTASSD---CTVKVW 375 (512)
Q Consensus 305 ~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~iw 375 (512)
|...|.+++|+|++ .+++++.||.|++||+++++.+..+.. | ...|.+++|+|++++|++++.| |.|++|
T Consensus 185 ~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~ 263 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 263 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEE
Confidence 78899999999999 999999999999999999999999998 8 9999999999999999999999 999999
Q ss_pred eCCCCceeeecCCCCC-------CCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEee------CC----
Q 010362 376 DLKSTDCLQTFKPPPP-------LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFS------SG---- 437 (512)
Q Consensus 376 d~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~------~~---- 437 (512)
|+++++....+..+.. ...+...+.+++|+|++ .++++++.|+.|++||+. +.....+. .+
T Consensus 264 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1sq9_A 264 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDI 342 (397)
T ss_dssp ETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGC
T ss_pred ECCCCcccceeccCcccccccccccccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhh
Confidence 9999988877753110 01167899999999987 799999999999999998 55555555 21
Q ss_pred --------cccCCcEEEEEECCCC----------CEEEEEeCCCeEEEEEcCCCe
Q 010362 438 --------KREGGDFVAACVSPKG----------EWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 438 --------~~~~~~~~~~~~s~~g----------~~l~~g~~dg~i~iwd~~~~~ 474 (512)
..+...+.+++|+|+| ++|++|+.||.|++|++.+|+
T Consensus 343 ~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 343 LAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred hccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 0116789999999999 799999999999999998764
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.2e-34 Score=277.18 Aligned_cols=245 Identities=19% Similarity=0.281 Sum_probs=210.8
Q ss_pred eeeccCcceeEEEEcCC-CCeEEEEeCCCeEEEEEccC----------CeeeEEeccccccCeEEEEEecCCC-EEEEEe
Q 010362 258 TFMMHDETVLCIEFSRD-SEMLASGSQDGKIKVWRIRS----------GQCLRRLERAHSEGVTSLVFSRDGS-QILSTS 325 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~-~~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~ 325 (512)
....|.+.|++++|+|+ +.+|++++.||.|++||+.+ ......+. .|...|.+++|+|++. +|++|+
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEEEEe
Confidence 34569999999999997 78999999999999999987 56666675 8999999999999988 999999
Q ss_pred CCCcEEEEeCCCCce-------eEEeeCCccceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCc---eeeecCCCCCCCC
Q 010362 326 FDSTARIHGLKSGKL-------LKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTD---CLQTFKPPPPLRG 394 (512)
Q Consensus 326 ~dg~v~i~d~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~ 394 (512)
.||.|++||+.++.. ...+.+|...|.+++|+| ++..|++++.||.|++||++++. ....+ ..
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~------~~ 275 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV------DA 275 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE------EC
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe------ec
Confidence 999999999987432 456778999999999999 77899999999999999999863 33333 25
Q ss_pred CCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC--eEEEEeeCCcccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcC
Q 010362 395 GDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG--QVVKSFSSGKREGGDFVAACVSPKGE-WIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 395 ~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~dg~i~iwd~~ 471 (512)
|...+++++|+|++..++++++.++.|++||++. ..+..+.. +...+.+++|+|+++ ++++++.||.|++||+.
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES---HKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC---CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec---CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 6789999999999977899999999999999984 33444443 356799999999995 68999999999999998
Q ss_pred C--------------CeeEEeccccCCCeEEEEEcCCCC-eEEEEECCCeEEEecC
Q 010362 472 S--------------GKLEHLMKVHEKDVIGVTHHPHRN-LLATYGEDCTMKLWKP 512 (512)
Q Consensus 472 ~--------------~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~~~dg~i~iW~~ 512 (512)
. .+++..+.+|...|++++|+|+++ ++++++.||.|+||++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 7 367778889999999999999998 9999999999999974
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.9e-35 Score=276.92 Aligned_cols=274 Identities=14% Similarity=0.237 Sum_probs=221.5
Q ss_pred cccccccccCccccceEEEecCcCceEEEEECCC---CCEEEEEeCCCeEEEEEcCCCe-eeccccccccceeeccCcce
Q 010362 191 AMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPD---GQFLVSCSFDGFIEVWDYLSGK-LKKDLQYQADETFMMHDETV 266 (512)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~sg~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~h~~~v 266 (512)
+....+|+............+|...|.+++|+|+ |++|++|+.||.|++||+.+++ .. ..+.+|...|
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--------~~~~~~~~~v 114 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV--------YSVKGHKEII 114 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS--------EEECCCSSCE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccE--------EEEEecccce
Confidence 5667788888877777767799999999999998 7999999999999999998876 32 3455699999
Q ss_pred eEEE------EcCCCCeEEEEeCCCeEEEEEccCCe-eeEEeccccc----cCeEEEE----EecCCCEEEEEeCCCcEE
Q 010362 267 LCIE------FSRDSEMLASGSQDGKIKVWRIRSGQ-CLRRLERAHS----EGVTSLV----FSRDGSQILSTSFDSTAR 331 (512)
Q Consensus 267 ~~l~------~s~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~----~~i~~~~----~~~~~~~l~~~~~dg~v~ 331 (512)
.+++ |+|++++|++++.||.|++||+.++. .+..+. .+. ..+.+++ |+|+++++++++.||.|+
T Consensus 115 ~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~ 193 (357)
T 3i2n_A 115 NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME-PVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIK 193 (357)
T ss_dssp EEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC-CCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEE
T ss_pred EEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc-ccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEE
Confidence 9995 47899999999999999999999887 566664 333 3789998 678999999999999999
Q ss_pred EEeCCCCceeEEeeCCccceeEEEEcC---CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCC
Q 010362 332 IHGLKSGKLLKEFRGHSSYVNDAIFTN---DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 408 (512)
Q Consensus 332 i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 408 (512)
+||+++++.... ..|...|.+++|+| +++++++++.||.|++||+++++....+... ...++...+.++.|+|++
T Consensus 194 i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~ 271 (357)
T 3i2n_A 194 LFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASV-SEKAHKSTVWQVRHLPQN 271 (357)
T ss_dssp EEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE-EEECCSSCEEEEEEETTE
T ss_pred EEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeee-ccCCCcCCEEEEEECCCC
Confidence 999998887544 56888999999999 9999999999999999999876554433211 112577899999999998
Q ss_pred CCeEEEEcCCCcEEEEecCCeE-----------------EEEeeCCcccCCcEEEEEECCCCCEEE-EEeCCCeEEEEEc
Q 010362 409 PDHIVVCNKTSSIYIMTLQGQV-----------------VKSFSSGKREGGDFVAACVSPKGEWIY-CVGEDRNLYCFSH 470 (512)
Q Consensus 409 ~~~l~~~~~~~~i~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~s~~g~~l~-~g~~dg~i~iwd~ 470 (512)
..++++++.|+.|++||++... .........+...+.+++|+|+|++++ +++.||.|++||+
T Consensus 272 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 272 RELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 5689999999999999987311 112222233567899999999999998 7999999999999
Q ss_pred CCCee
Q 010362 471 QSGKL 475 (512)
Q Consensus 471 ~~~~~ 475 (512)
.+.+.
T Consensus 352 ~~~~~ 356 (357)
T 3i2n_A 352 TKLNK 356 (357)
T ss_dssp CC---
T ss_pred CCccc
Confidence 87654
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=268.36 Aligned_cols=272 Identities=16% Similarity=0.213 Sum_probs=230.9
Q ss_pred ccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcc
Q 010362 186 FRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265 (512)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~ 265 (512)
+.+..+....+|+.........+. +|...|.+++|+|++++|++++.||.|++||+.+++....+. |...
T Consensus 48 ~~~~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~ 117 (369)
T 3zwl_B 48 FSCSKDSSASVWYSLNGERLGTLD-GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK---------SPVP 117 (369)
T ss_dssp EEEESSSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---------CSSC
T ss_pred EEEeCCCEEEEEeCCCchhhhhhh-hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---------cCCC
Confidence 334445567788887777777776 899999999999999999999999999999999887665433 7889
Q ss_pred eeEEEEcCCCCeEEEEeCC-----CeEEEEEccCCee-----------eEEecccccc--CeEEEEEecCCCEEEEEeCC
Q 010362 266 VLCIEFSRDSEMLASGSQD-----GKIKVWRIRSGQC-----------LRRLERAHSE--GVTSLVFSRDGSQILSTSFD 327 (512)
Q Consensus 266 v~~l~~s~~~~~l~s~~~d-----g~i~vwd~~~~~~-----------~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d 327 (512)
|.+++|+|+++++++++.+ |.|++||+.++.. ...+. .+.. .+.+++|+|+++++++++.|
T Consensus 118 v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d 196 (369)
T 3zwl_B 118 VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THEGLDAATVAGWSTKGKYIIAGHKD 196 (369)
T ss_dssp EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCTTCCCEEEEEECGGGCEEEEEETT
T ss_pred eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCcCccceeEEEEcCCCCEEEEEcCC
Confidence 9999999999999999999 9999999987642 22222 3444 89999999999999999999
Q ss_pred CcEEEEeCCC-CceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcC
Q 010362 328 STARIHGLKS-GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 406 (512)
Q Consensus 328 g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 406 (512)
|.|++||+++ ++.+..+..|...|.+++|+|++++|++++.||.|++||+++++....+. +...+.++.++|
T Consensus 197 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~~~~~~~~~ 269 (369)
T 3zwl_B 197 GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-------TDCPLNTAVITP 269 (369)
T ss_dssp SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-------CSSCEEEEEECS
T ss_pred CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-------CCCCceeEEecC
Confidence 9999999998 78888999999999999999999999999999999999999998887776 456899999999
Q ss_pred CCCCeEEEEcCCC--------------cEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Q 010362 407 KNPDHIVVCNKTS--------------SIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 407 ~~~~~l~~~~~~~--------------~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~ 471 (512)
++ ..+++++.++ .+++||.. +.....+.. +...+.+++|+|+|++|++++.||.|++|++.
T Consensus 270 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 270 LK-EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG---HFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp SS-SEEEEEECCC-------------CEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred CC-ceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec---ccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 98 7777777777 89999998 444444443 35679999999999999999999999999998
Q ss_pred CCeeEEec
Q 010362 472 SGKLEHLM 479 (512)
Q Consensus 472 ~~~~~~~~ 479 (512)
++.....+
T Consensus 346 ~~~~~~~~ 353 (369)
T 3zwl_B 346 KSYFDFKY 353 (369)
T ss_dssp HHHHTCCC
T ss_pred cccchhHH
Confidence 76554433
No 93
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-34 Score=282.34 Aligned_cols=282 Identities=17% Similarity=0.213 Sum_probs=208.4
Q ss_pred eeccCcccccccccccCccccceEEE-ecCcCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeec
Q 010362 184 DLFRGTAAMKQDVEDMYPTTLSHTIK-FGTKSHAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261 (512)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 261 (512)
.+..|..+....+|+.........+. .+|.+.|++++|+| ++++|++|+.||+|++||++++....... ...
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~------~~~ 207 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFAS------SDT 207 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEEC------CSS
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEec------cCC
Confidence 34456666777888877665554443 38999999999998 78999999999999999998764332111 112
Q ss_pred cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCce
Q 010362 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS-QILSTSFDSTARIHGLKSGKL 340 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~ 340 (512)
+...+.+++|+|++.+|++|+.||.|++||++. +.+..+. .|...|.+++|+|++. ++++|+.|+.|++||+++.+.
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLR-MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG 285 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSB-CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEe-cccceEEeeeecCCCceEEEEecCcceeeEEecccccc
Confidence 455688999999999999999999999999864 5566665 7999999999999876 678999999999999988765
Q ss_pred eEE---eeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCC--------
Q 010362 341 LKE---FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP-------- 409 (512)
Q Consensus 341 ~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------- 409 (512)
... ..+|...|++++|+|+|++|++++.||.|++||++++.....+............+....++|.+.
T Consensus 286 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (435)
T 4e54_B 286 KASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYP 365 (435)
T ss_dssp SSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCC
T ss_pred cceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcC
Confidence 433 356899999999999999999999999999999999887766554332222222233344555542
Q ss_pred ---CeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEE-EECCCCCEEEEEeCCCeEEEEEcCCCeeE
Q 010362 410 ---DHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAA-CVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476 (512)
Q Consensus 410 ---~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~~g~~dg~i~iwd~~~~~~~ 476 (512)
..++.+..++.|++||.. +..+..+... +...+.++ +|+|+|++|++|+ |+.|++|++++++..
T Consensus 366 d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~--~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 366 DPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP--ESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CTTSCCSSTTCCCCEEEECSSSCCEEEEECCS--SCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred CCCeEEEEecCCCEEEEEECCCCcEEEEEeCC--CCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 222222344679999998 4555554433 24456665 6999999999876 789999999988754
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-33 Score=271.19 Aligned_cols=275 Identities=17% Similarity=0.233 Sum_probs=218.0
Q ss_pred eeccCcccccccccccCccccceEEEe-cCcCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeec
Q 010362 184 DLFRGTAAMKQDVEDMYPTTLSHTIKF-GTKSHAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM 261 (512)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 261 (512)
.++.+..+....+|+.........+.. +|...|.+++|+| ++++|++|+.||.|++||+.+... ..+. ...+
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~-----~~~~ 161 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI-QVFA-----KTDS 161 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE-EEEE-----CCCC
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce-EEEe-----ccCC
Confidence 344455556777888887777766653 7999999999999 789999999999999999986432 2211 1223
Q ss_pred cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCC-EEEEEeCCCcEEEEeCCC---
Q 010362 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS-QILSTSFDSTARIHGLKS--- 337 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~i~d~~~--- 337 (512)
|...|.+++|+|++++|++|+.||.|++||+ +++.+..+. .|...|.+++|+|+++ ++++|+.|+.|++||+++
T Consensus 162 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 162 WDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEK-LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp SSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEE-CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS
T ss_pred CCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEec-cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc
Confidence 5688999999999999999999999999998 577777776 7999999999999998 999999999999999987
Q ss_pred -CceeEEeeCCccceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCC-CCCC----------CceeEEEEE
Q 010362 338 -GKLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP-LRGG----------DASVNSVHL 404 (512)
Q Consensus 338 -~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~----------~~~i~~~~~ 404 (512)
+..+..+ +|...|.+++|+| ++++|++++.||.|++||+++++....+..... ...+ ...+..+.+
T Consensus 240 ~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 240 KNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp TTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred ccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 5566666 6899999999999 999999999999999999998876555442211 1111 234445666
Q ss_pred cCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q 010362 405 FPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 405 ~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~ 472 (512)
+|++ .+ +++.|+.|++||+. +..+..+... .+...+..++|+|+|++|++|+ ||.|++||+.+
T Consensus 319 s~dg-~~--s~s~d~~i~iwd~~~~~~~~~l~~~-~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 319 YPDD-QL--LLNDKRTIDIYDANSGGLVHQLRDP-NAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp BCCT-TT--CTTCCCCEEEEETTTCCEEEEECBT-TBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred cCCc-cc--ccCCCCeEEEEecCCCceeeeecCC-CCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 6666 33 77899999999998 5555555432 2355677789999999999997 99999999864
No 95
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=7.8e-33 Score=270.15 Aligned_cols=284 Identities=13% Similarity=0.177 Sum_probs=239.1
Q ss_pred CcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEE
Q 010362 212 TKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR 291 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd 291 (512)
....+.+++|+|++.++++++.|+.|++||+.+++....... ..+.+|...|.+++|+|++.++++++.|+.|++||
T Consensus 121 ~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d 197 (433)
T 3bws_A 121 TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP---EKYKKKLGFVETISIPEHNELWVSQMQANAVHVFD 197 (433)
T ss_dssp CSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC---HHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEE
T ss_pred CCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc---ccccccCCceeEEEEcCCCEEEEEECCCCEEEEEE
Confidence 445577999999888888888899999999998876643321 23456889999999999999999999999999999
Q ss_pred ccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEe---
Q 010362 292 IRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS--- 367 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--- 367 (512)
+.+++.+..+. .|...+.+++|+|+++.+++++ .|+.|++||+++++.+..+..+. .+.+++|+|+++.+++++
T Consensus 198 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~ 275 (433)
T 3bws_A 198 LKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPRGLLLSKDGKELYIAQFSA 275 (433)
T ss_dssp TTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEEEEEECTTSSEEEEEEEES
T ss_pred CCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-CceEEEEcCCCCEEEEEECCC
Confidence 99999888886 7888999999999999886554 79999999999998888877654 589999999999999888
Q ss_pred -----CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeCCcccC
Q 010362 368 -----SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSGKREG 441 (512)
Q Consensus 368 -----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~ 441 (512)
.||.|++||+++++....+. +...+.+++|+|++..++++++.++.+++||+... ....+. ..
T Consensus 276 ~~~~~~dg~i~~~d~~~~~~~~~~~-------~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~----~~ 344 (433)
T 3bws_A 276 SNQESGGGRLGIYSMDKEKLIDTIG-------PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP----VF 344 (433)
T ss_dssp CTTCSCCEEEEEEETTTTEEEEEEE-------EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE----CS
T ss_pred CccccCCCeEEEEECCCCcEEeecc-------CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec----CC
Confidence 58899999999887766542 34578899999998667788899999999999844 444443 24
Q ss_pred CcEEEEEECCCCCEEEEEeC---------------CCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEEC-CC
Q 010362 442 GDFVAACVSPKGEWIYCVGE---------------DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGE-DC 505 (512)
Q Consensus 442 ~~~~~~~~s~~g~~l~~g~~---------------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~-dg 505 (512)
..+..++|+|+|+++++++. ||.|++||..+++.+..+.. ...+.+++|+|++++|++++. |+
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~ 423 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDH 423 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTT
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCC
Confidence 56889999999999998886 57999999999999988875 457899999999999988875 99
Q ss_pred eEEEecC
Q 010362 506 TMKLWKP 512 (512)
Q Consensus 506 ~i~iW~~ 512 (512)
.|++|+.
T Consensus 424 ~i~v~~~ 430 (433)
T 3bws_A 424 QIRVYRR 430 (433)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999973
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=299.67 Aligned_cols=249 Identities=21% Similarity=0.300 Sum_probs=207.7
Q ss_pred ecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC--CCeEEEEeCCCeE
Q 010362 210 FGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD--SEMLASGSQDGKI 287 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i 287 (512)
.+|.+.|++++|+|+|++|++|+.||+|+|||+.++.. .....+.+|..+|++++|+|+ +++|++|+.||.|
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~------~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE------EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC------ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 49999999999999999999999999999999874432 122355679999999999998 9999999999999
Q ss_pred EEEEccCCe--eeEEeccccccCeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCc--eeEEeeCCccceeEEEEcC---
Q 010362 288 KVWRIRSGQ--CLRRLERAHSEGVTSLVFSRD--GSQILSTSFDSTARIHGLKSGK--LLKEFRGHSSYVNDAIFTN--- 358 (512)
Q Consensus 288 ~vwd~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~--- 358 (512)
++||+.+++ .+..+. .|...|.+++|+|+ ++.+++|+.||.|++||++++. ....+.+|...|.+++|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEECCCCccccccccc-CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 999999987 555554 79999999999999 9999999999999999998773 4456678999999999999
Q ss_pred ----------CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC
Q 010362 359 ----------DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG 428 (512)
Q Consensus 359 ----------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 428 (512)
++..+++|+.||.|++||++++......
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~------------------------------------------ 196 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL------------------------------------------ 196 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEE------------------------------------------
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCccccee------------------------------------------
Confidence 5888999999999999998765311110
Q ss_pred eEEEEeeCCcccCCcEEEEEECCC---CCEEEEEeCCCeEEEEEcCCCe-----eEEeccccCCCeEEEEEcCCCCeEEE
Q 010362 429 QVVKSFSSGKREGGDFVAACVSPK---GEWIYCVGEDRNLYCFSHQSGK-----LEHLMKVHEKDVIGVTHHPHRNLLAT 500 (512)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~s~~---g~~l~~g~~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~l~s 500 (512)
...+ ..+...+.+++|+|+ ++++++|+.||.|++||+.++. .......|...|++++|+|+++++++
T Consensus 197 --~~~~---~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 197 --ESTL---EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp --EEEE---CCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEE
T ss_pred --eeee---cCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEE
Confidence 0001 113556899999999 8999999999999999998874 33344568899999999999999999
Q ss_pred EECCCeEEEecC
Q 010362 501 YGEDCTMKLWKP 512 (512)
Q Consensus 501 ~~~dg~i~iW~~ 512 (512)
|+.||.|++|+.
T Consensus 272 ~s~Dg~I~vwd~ 283 (753)
T 3jro_A 272 SGGDNKVTLWKE 283 (753)
T ss_dssp ECSSSCEECCBC
T ss_pred EcCCCEEEEEec
Confidence 999999999984
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=270.45 Aligned_cols=310 Identities=16% Similarity=0.217 Sum_probs=217.7
Q ss_pred eccCcccccccccccCccccceEEE------------ecCcCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeeccc
Q 010362 185 LFRGTAAMKQDVEDMYPTTLSHTIK------------FGTKSHAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDL 251 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~h~~~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 251 (512)
++.+..+....+|+.........+. .+|...|.+++|+| ++.+|++|+.||.|++||+.+++....+
T Consensus 59 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (408)
T 4a11_B 59 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF 138 (408)
T ss_dssp EEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec
Confidence 3344445566777776665555443 25999999999999 7889999999999999999988766544
Q ss_pred cccccceeeccCcceeEEEEcCC---CCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCC-EEEEEeCC
Q 010362 252 QYQADETFMMHDETVLCIEFSRD---SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS-QILSTSFD 327 (512)
Q Consensus 252 ~~~~~~~~~~h~~~v~~l~~s~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d 327 (512)
. +...+.++.|+|. +.++++++.||.|++||+.+++.+..+. .|...|.+++|+|++. .+++|+.|
T Consensus 139 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~d 208 (408)
T 4a11_B 139 N---------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ-GHRQEILAVSWSPRYDYILATASAD 208 (408)
T ss_dssp E---------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC-CCCSCEEEEEECSSCTTEEEEEETT
T ss_pred c---------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec-CCCCcEEEEEECCCCCcEEEEEcCC
Confidence 3 7788999999995 4499999999999999999999888886 7999999999999998 58899999
Q ss_pred CcEEEEeCCCCc-eeEEe---------------eCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCC
Q 010362 328 STARIHGLKSGK-LLKEF---------------RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391 (512)
Q Consensus 328 g~v~i~d~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 391 (512)
|.|++||++++. .+..+ ..|...|.+++|+|++++|++++.||.|++||+++++..........
T Consensus 209 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 288 (408)
T 4a11_B 209 SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVC 288 (408)
T ss_dssp SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCC
T ss_pred CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecccccc
Confidence 999999998765 33333 56888999999999999999999999999999998876554432221
Q ss_pred CCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q 010362 392 LRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSH 470 (512)
Q Consensus 392 ~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~ 470 (512)
... ...............+++++.++.+++||+. +.....+.. +...+.+++|+|++++|++|+.||.|++||+
T Consensus 289 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 289 NNS--KKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG---HYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp CCC--SSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC---CSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ccc--cccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc---CCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 111 1112223333444677888889999999998 445554443 4567999999999999999999999999999
Q ss_pred CCCeeEEeccccCCCeEEEEEcC-CCCeEEEEECCCeEEEecC
Q 010362 471 QSGKLEHLMKVHEKDVIGVTHHP-HRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 471 ~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~~~dg~i~iW~~ 512 (512)
.+++++.....+.. ...+.| ....+.+++.|+.+++|+.
T Consensus 364 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~~ 403 (408)
T 4a11_B 364 SLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWSH 403 (408)
T ss_dssp CC-----------------------------------------
T ss_pred CCCCccCCCCceEe---ccccccccceeecccCccCceeecCC
Confidence 99988765543332 233444 4456677889999999973
No 98
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.5e-34 Score=275.33 Aligned_cols=278 Identities=20% Similarity=0.225 Sum_probs=223.9
Q ss_pred CcccccccccccCcc----ccceEEEecCcCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeecc
Q 010362 188 GTAAMKQDVEDMYPT----TLSHTIKFGTKSHAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH 262 (512)
Q Consensus 188 ~~~~~~~~~~~~~~~----~~~~~~~~~h~~~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h 262 (512)
+.......+|+.... .....+ .+|.+.|++++|+| ++++|++|+.||+|++||+.++....... .+...+.+|
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~-~~~~~~~~h 130 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLV-CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR-EPVITLEGH 130 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCB-CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC-SCSEEEECC
T ss_pred EcCCCEEEEEECccCCCCCCCCceE-ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC-CceEEecCC
Confidence 444455566665332 122233 38999999999999 99999999999999999998875433221 234567789
Q ss_pred CcceeEEEEcCCC-CeEEEEeCCCeEEEEEccCCeeeEEec-cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCce
Q 010362 263 DETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340 (512)
Q Consensus 263 ~~~v~~l~~s~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~ 340 (512)
...|.+++|+|++ ++|++++.||.|++||+.+++.+..+. ..|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 9999999999998 699999999999999999999988883 37999999999999999999999999999999999999
Q ss_pred eEEe-eCCccc-eeEEEEcCCCCEEEEE---eCCCcEEEEeCCCCce-eeecCCCCCCCCCCceeEEEEEcCCCCCeEEE
Q 010362 341 LKEF-RGHSSY-VNDAIFTNDGSRVVTA---SSDCTVKVWDLKSTDC-LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 414 (512)
Q Consensus 341 ~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 414 (512)
+..+ ..|.+. +.++.|+|++.++++| +.|+.|++||++++.. ..... ..+...+.++.|+|++..++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE-----LDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-----CCCCSSCEEEEEETTTTEEEEE
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe-----ccCCCceeEEEEcCCCCEEEEE
Confidence 9888 678775 8999999999999998 7899999999998654 22221 1245678999999998555567
Q ss_pred EcCCCcEEEEecCCeE--EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCee
Q 010362 415 CNKTSSIYIMTLQGQV--VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKL 475 (512)
Q Consensus 415 ~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~ 475 (512)
++.|+.|++|++.... ...+.... +...+.+++|+|++.++++ .++.+++|++.++..
T Consensus 286 g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 286 GKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp ETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred EcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 7789999999998443 44433322 4567899999999998864 567999999988764
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.2e-33 Score=269.99 Aligned_cols=276 Identities=17% Similarity=0.262 Sum_probs=221.1
Q ss_pred cccccccccCccccceEEEe-cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEE
Q 010362 191 AMKQDVEDMYPTTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269 (512)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l 269 (512)
+....+|+.....+.+.+.. +|...|+|++|+|+|++||+|+.||+|+|||+.+++.... +.+|...+.++
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~--------~~~h~~~v~~~ 195 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN--------MTSHSARVGSL 195 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE--------ECCCSSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE--------EeCCCCceEEE
Confidence 34567888888888777764 6788999999999999999999999999999999887653 44699999998
Q ss_pred EEcCCCCeEEEEeCCCeEEEEEccCCee-eEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc----eeEEe
Q 010362 270 EFSRDSEMLASGSQDGKIKVWRIRSGQC-LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK----LLKEF 344 (512)
Q Consensus 270 ~~s~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~----~~~~~ 344 (512)
+|+ +.+|++|+.|+.+++||...... +..+. .|...+..+.|+|++.++++++.|+.+++|+..+++ .+...
T Consensus 196 s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~ 272 (420)
T 4gga_A 196 SWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTF 272 (420)
T ss_dssp EEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEE
T ss_pred eeC--CCEEEEEeCCCceeEeeecccceeeEEec-ccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeee
Confidence 885 67999999999999999987554 44454 899999999999999999999999999999998765 34567
Q ss_pred eCCccceeEEEEcCCCC-EEEEE--eCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEE-cCCCc
Q 010362 345 RGHSSYVNDAIFTNDGS-RVVTA--SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVC-NKTSS 420 (512)
Q Consensus 345 ~~~~~~v~~~~~~~~~~-~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~~~~ 420 (512)
..|...|.+++|+|.+. .++++ +.|++|++||+.++.+...+.. ...+.++.|+|++..+++++ ..|+.
T Consensus 273 ~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-------~~~v~~~~~~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 273 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-------HSQVCSILWSPHYKELISGHGFAQNQ 345 (420)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-------SSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-------ccceeeeeecCCCCeEEEEEecCCCE
Confidence 78999999999999654 55543 4799999999999988887753 35788999999885544443 37899
Q ss_pred EEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeE
Q 010362 421 IYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 487 (512)
Q Consensus 421 i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 487 (512)
|++||+. +..+..+.. |...|.+++|+|||++|++|+.||+|++||+.+..+......+...+.
T Consensus 346 I~iwd~~~~~~v~~l~g---H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKG---HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp EEEEETTTCCEEEEECC---CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred EEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 9999998 555555543 467899999999999999999999999999988766665555544433
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=255.73 Aligned_cols=240 Identities=20% Similarity=0.259 Sum_probs=209.7
Q ss_pred cceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeC
Q 010362 256 DETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL 335 (512)
Q Consensus 256 ~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~ 335 (512)
...+.+|...|++++| |++++|++|+.||.|++||+.++.....+. .|...|.+++|+|+++++++++.||.|++|++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY-TGQGFLNSVCYDSEKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE-ECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee-cCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence 3467789999999999 999999999999999999999998888776 78999999999999999999999999999998
Q ss_pred CCC---ceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeE
Q 010362 336 KSG---KLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHI 412 (512)
Q Consensus 336 ~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 412 (512)
... +.+..+.+|...|.++.| +++.+++++.||.|++|| .+.....+. .+...+.++.+.|.....+
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~------~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ------AHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE------CCSSCEEEEEEEETTTTEE
T ss_pred eecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc------cCCCceeEEEEccCCCCEE
Confidence 654 567788899999999999 567999999999999999 445554443 4677999999999666999
Q ss_pred EEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEc
Q 010362 413 VVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHH 492 (512)
Q Consensus 413 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~ 492 (512)
++++.++.+++||.. .....+... +...+.+++|+|++. +++++.||.|++||+.+++++..+.+|...|++++|+
T Consensus 159 ~~~~~d~~i~i~d~~-~~~~~~~~~--~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 234 (313)
T 3odt_A 159 LTASADKTIKLWQND-KVIKTFSGI--HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLL 234 (313)
T ss_dssp EEEETTSCEEEEETT-EEEEEECSS--CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEEECCCCEEEEecC-ceEEEEecc--CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEe
Confidence 999999999999943 334444332 356799999999999 9999999999999999999999999999999999999
Q ss_pred CCCCeEEEEECCCeEEEecC
Q 010362 493 PHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 493 p~~~~l~s~~~dg~i~iW~~ 512 (512)
|++ .+++++.||.|++||.
T Consensus 235 ~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 235 PNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp TTS-CEEEEETTSEEEEECT
T ss_pred cCC-CEEEEecCCEEEEEEC
Confidence 999 6889999999999984
No 101
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-33 Score=266.27 Aligned_cols=238 Identities=14% Similarity=0.115 Sum_probs=205.6
Q ss_pred eccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCe---eeEEeccccccCeEEEEEecCCC-EEEEEeCCCcEEEEeC
Q 010362 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ---CLRRLERAHSEGVTSLVFSRDGS-QILSTSFDSTARIHGL 335 (512)
Q Consensus 260 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~i~d~ 335 (512)
.+|...|.+++|+|++++|++++.||.|++||+.++. ...... .|...|.+++|+|+++ +|++|+.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 3599999999999999999999999999999999877 233343 7899999999999999 9999999999999999
Q ss_pred -CCCceeEEeeC--CccceeEEEEcCCCCEEEEEeCCCcEEEEeCCC---------CceeeecCCCCCCCCCCceeEEEE
Q 010362 336 -KSGKLLKEFRG--HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS---------TDCLQTFKPPPPLRGGDASVNSVH 403 (512)
Q Consensus 336 -~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~i~~~~ 403 (512)
.+++. ..+.+ |...|.+++|+| ++.+++++.||.|++||+++ ++....+. +...+.++.
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~ 157 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-------VKNKIFTMD 157 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-------SCCCEEEEE
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-------eCCceEEEE
Confidence 77755 67788 999999999999 99999999999999999986 55444432 567899999
Q ss_pred EcCCCCCeEEEEcCCCcEEEEecCC-eE--EEEeeCCcccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCC------
Q 010362 404 LFPKNPDHIVVCNKTSSIYIMTLQG-QV--VKSFSSGKREGGDFVAACVSP-KGEWIYCVGEDRNLYCFSHQSG------ 473 (512)
Q Consensus 404 ~~~~~~~~l~~~~~~~~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~dg~i~iwd~~~~------ 473 (512)
++|+. +++++.++.|++||++. .. ...... .+...+.+++|+| +++++++|+.||.|++|++..+
T Consensus 158 ~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 158 TNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEES--GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS 232 (342)
T ss_dssp ECSSE---EEEEESTTEEEEEESSCCTTCCCEEEEC--SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTC
T ss_pred ecCCc---EEEEeCCCeEEEEECCccccccceeeec--CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccc
Confidence 99865 99999999999999986 22 222222 2356799999999 9999999999999999999887
Q ss_pred eeEEeccccCC---------CeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 474 KLEHLMKVHEK---------DVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 474 ~~~~~~~~h~~---------~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+....+..|.. .|++++|+|++++|++++.||.|++||.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 77778887765 9999999999999999999999999984
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-34 Score=267.60 Aligned_cols=267 Identities=10% Similarity=0.062 Sum_probs=209.4
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc------
Q 010362 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR------ 293 (512)
Q Consensus 220 ~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~------ 293 (512)
.+.+++.++++|+.||+|++||+.+++....+. ...|.++.|+|+ +++++.|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITIL 109 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE----------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe----------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEe
Confidence 445688899999999999999999887665442 356788889888 9999999999999665
Q ss_pred ---CCeeeEEeccccccCeEEEEEec--CCCEEEEEeCCCcEEEEeCCCCceeEEeeC-CccceeEEEEcCCCCEEEEEe
Q 010362 294 ---SGQCLRRLERAHSEGVTSLVFSR--DGSQILSTSFDSTARIHGLKSGKLLKEFRG-HSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 294 ---~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 367 (512)
+++.+......|...|.+++|+| +++++++++.||.|++||+++++....... |...+++++|+|++.+|++|+
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc
Confidence 55555566556778999999999 999999999999999999999988776644 556899999999999999999
Q ss_pred CCCcEEEEeCCCCcee-eecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-EEEEeeCCcccCCcE-
Q 010362 368 SDCTVKVWDLKSTDCL-QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSGKREGGDF- 444 (512)
Q Consensus 368 ~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~- 444 (512)
.||.|++||+++++.. ..+.. +|..+|.+++|+|++ ..+++++ ++.|++||++.. ....+.....+...+
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~-----~h~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 262 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPV-----DEEAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTG 262 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCC-----CTTSCEEEEEECTTS-SEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----C
T ss_pred CCCEEEEEECCCCCCCccEEec-----cCCCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCCCCcceeeccccccccccc
Confidence 9999999999998766 55542 367899999999987 7888888 559999999843 222222111111222
Q ss_pred -EEEEECCCCCEEEEEeC-CCeEEEEEcCCCeeEEeccccCCCeEEEEEcC---CCCeEEEEECCCeEEEe
Q 010362 445 -VAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHP---HRNLLATYGEDCTMKLW 510 (512)
Q Consensus 445 -~~~~~s~~g~~l~~g~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p---~~~~l~s~~~dg~i~iW 510 (512)
.+++|+|+|++|++++. |+.|++|++..+...... .++..++|+| +...+++++.||.+.++
T Consensus 263 ~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 263 TVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred ceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence 46999999999999998 999999998665432222 5677888888 77888999999988875
No 103
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.6e-32 Score=259.91 Aligned_cols=278 Identities=14% Similarity=0.202 Sum_probs=211.9
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeE-EEEeCCCeEEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML-ASGSQDGKIKV 289 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i~v 289 (512)
+|.+.|+|++|+|||++||+|+.+| ++|||+.+++..... +...+..+++.++++.+ ++++.|++|++
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 85 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ----------EMRHLSKVRMLHRTNYVAFVTGVKEVVHI 85 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE----------ECSCCCEEEECTTSSEEEEECSSTTEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee----------ecCCeEEEEEcCCCCEEEEEECCccEEEE
Confidence 8999999999999999999998765 789998876644321 22358889999988877 56777899999
Q ss_pred EEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-ceeEEeeCCccceeEEEEcCCCCEEEE--E
Q 010362 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-KLLKEFRGHSSYVNDAIFTNDGSRVVT--A 366 (512)
Q Consensus 290 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~--~ 366 (512)
||+.+++.+..+. +...|.+++|+++. ++++. |+.|++||+.++ +.+..+.. +...+++++ ..+++ |
T Consensus 86 Wd~~~~~~~~~~~--~~~~v~~v~~~~~~--~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg 155 (355)
T 3vu4_A 86 WDDVKKQDVSRIK--VDAPVKDLFLSREF--IVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNE 155 (355)
T ss_dssp EETTTTEEEEEEE--CSSCEEEEEECSSE--EEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEES
T ss_pred EECCCCcEEEEEE--CCCceEEEEEcCCE--EEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCC
Confidence 9999999988875 67799999998764 44444 789999999988 66666654 344566777 56666 5
Q ss_pred eCCCcEEEEeCCCCceeee---------cCC-CCCCCCCCceeEEEEEcCCCCCeEEEEcCCCc-EEEEecC-CeEEEEe
Q 010362 367 SSDCTVKVWDLKSTDCLQT---------FKP-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS-IYIMTLQ-GQVVKSF 434 (512)
Q Consensus 367 ~~dg~i~iwd~~~~~~~~~---------~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~-i~~~~~~-~~~~~~~ 434 (512)
+.||.|++||++++..... +.+ ...+.+|...|.+++|+|++ .++++++.|+. |++||++ +..+..+
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS-SEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC-CEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 7899999999997651110 011 22345788999999999987 89999999998 9999998 5566665
Q ss_pred eCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeE--Eecc---------------------ccCCCeEEEEE
Q 010362 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE--HLMK---------------------VHEKDVIGVTH 491 (512)
Q Consensus 435 ~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~--~~~~---------------------~h~~~v~~v~~ 491 (512)
..+ .+...+.+++|+|+|++|++++.||.|++||+..+... ..+. .+..+...++|
T Consensus 235 ~~g-~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 313 (355)
T 3vu4_A 235 RRG-LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW 313 (355)
T ss_dssp ECT-TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE
T ss_pred EcC-CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE
Confidence 532 13568999999999999999999999999999765321 1111 11223467999
Q ss_pred cCCCCeEEEEECCCeEEEec
Q 010362 492 HPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 492 ~p~~~~l~s~~~dg~i~iW~ 511 (512)
+|+++.+++++.||.+++|+
T Consensus 314 ~~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 314 ISESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp SSSSEEEEEETTTTEEEEEE
T ss_pred eCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999996
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=274.54 Aligned_cols=248 Identities=13% Similarity=0.253 Sum_probs=204.1
Q ss_pred cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCe-----------eeEEeccccc------------cCeEEEEEecCC
Q 010362 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ-----------CLRRLERAHS------------EGVTSLVFSRDG 318 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~~~~------------~~i~~~~~~~~~ 318 (512)
|.+.|++++|+|+|++||+|+.||.|++||+.+++ ....+. +|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcCCC
Confidence 78899999999999999999999999999999877 466665 787 889999999998
Q ss_pred --CEEEEEeCCCcEEEEeCCCCcee---------------------------------------EE-eeCCccceeEEEE
Q 010362 319 --SQILSTSFDSTARIHGLKSGKLL---------------------------------------KE-FRGHSSYVNDAIF 356 (512)
Q Consensus 319 --~~l~~~~~dg~v~i~d~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 356 (512)
..|++++.|+.|++||+.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764332 12 3579999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCC-CceeeecCC-CCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeE----
Q 010362 357 TNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKP-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV---- 430 (512)
Q Consensus 357 ~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~---- 430 (512)
+|++++|++| .||.|++||+++ +.....+.. +....+|...|.+++|+|+++.++++++.|+.|++||++...
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999994 444433211 123457888999999999987899999999999999998443
Q ss_pred -EEEeeCCcc---------cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC-CeeEEeccccCCC--------------
Q 010362 431 -VKSFSSGKR---------EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS-GKLEHLMKVHEKD-------------- 485 (512)
Q Consensus 431 -~~~~~~~~~---------~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~-------------- 485 (512)
...+..... +...+.+++|+|+|++|++++. |.|++||+.+ ++++..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 344443221 1137999999999999999999 9999999997 8888888888642
Q ss_pred -eEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 486 -VIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 486 -v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+..++|+|++++|++|+.||.|++||.
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 334999999999999999999999984
No 105
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-32 Score=267.78 Aligned_cols=260 Identities=19% Similarity=0.227 Sum_probs=213.1
Q ss_pred EEEecCcCceEEEEECCC-CCEEEEEeCCCeEEEEEcCCCeeecc--ccccccceeeccCcceeEEEEcCCCC-eEEEEe
Q 010362 207 TIKFGTKSHAECARFSPD-GQFLVSCSFDGFIEVWDYLSGKLKKD--LQYQADETFMMHDETVLCIEFSRDSE-MLASGS 282 (512)
Q Consensus 207 ~~~~~h~~~v~~~~~s~~-~~~l~sg~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~h~~~v~~l~~s~~~~-~l~s~~ 282 (512)
....+|.+.|++++|+|+ +.+||+|+.||.|++||+.+...... -...+...+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 444689999999999997 78999999999999999976311110 01233456778999999999999988 999999
Q ss_pred CCCeEEEEEccCCee-------eEEeccccccCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCC---ceeEEeeCCccce
Q 010362 283 QDGKIKVWRIRSGQC-------LRRLERAHSEGVTSLVFSR-DGSQILSTSFDSTARIHGLKSG---KLLKEFRGHSSYV 351 (512)
Q Consensus 283 ~dg~i~vwd~~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~---~~~~~~~~~~~~v 351 (512)
.||.|++||+.++.. ...+. .|...|.+++|+| ++..|++++.||.|++||++++ +.+..+..|...|
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 999999999987432 33443 7889999999999 6789999999999999999987 5777888999999
Q ss_pred eEEEEcCCCC-EEEEEeCCCcEEEEeCCCC-ceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe
Q 010362 352 NDAIFTNDGS-RVVTASSDCTVKVWDLKST-DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ 429 (512)
Q Consensus 352 ~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 429 (512)
++++|+|++. .+++|+.||.|++||+++. ..+..+. .|...|.++.|+|++..++++++.++.|.+||+...
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~------~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE------CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee------cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 9999999887 6889999999999999974 4444443 467899999999999888999999999999999851
Q ss_pred E------------EEEeeCCcccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC
Q 010362 430 V------------VKSFSSGKREGGDFVAACVSPKGE-WIYCVGEDRNLYCFSHQSG 473 (512)
Q Consensus 430 ~------------~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~dg~i~iwd~~~~ 473 (512)
. .........+...+.+++|+|++. ++++++.||.|++|++..+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 0 012222233466799999999999 8999999999999998754
No 106
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.3e-33 Score=268.45 Aligned_cols=238 Identities=13% Similarity=0.076 Sum_probs=178.6
Q ss_pred EEEcCCCCeEEEEeCCCeEEEEEccCCeeeEE----eccccccCeEEEEEec--------CCCEEEEEeCCCcEEEEeCC
Q 010362 269 IEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR----LERAHSEGVTSLVFSR--------DGSQILSTSFDSTARIHGLK 336 (512)
Q Consensus 269 l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~~i~~~~~~~--------~~~~l~~~~~dg~v~i~d~~ 336 (512)
..+++++.+|++++.|++|++||+.++..... ...+|.+.|.+++|+| |+++|++|+.|++|++||++
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 33444567899999999999999998865432 1248999999999998 78999999999999999999
Q ss_pred CCceeEEeeCCccceeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceeeecCCC-------------------CCCCCCC
Q 010362 337 SGKLLKEFRGHSSYVNDAIFTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKPP-------------------PPLRGGD 396 (512)
Q Consensus 337 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------------------~~~~~~~ 396 (512)
++..+..+..|..+|.+++|+|++. +|++++.||+|++||+++++........ ....++.
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 8888888888999999999999874 7999999999999999987654332211 1123567
Q ss_pred ceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeE-EEEeeCCcc---------------cCCcEEEEEECC--CCCEEEE
Q 010362 397 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV-VKSFSSGKR---------------EGGDFVAACVSP--KGEWIYC 458 (512)
Q Consensus 397 ~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~~s~--~g~~l~~ 458 (512)
..+.++.|++.+...+++++.|+.+++||+.... ...+..... ........+++| ++.++++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA 334 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence 7888999986555899999999999999987322 211111100 001111223333 4557788
Q ss_pred EeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCe
Q 010362 459 VGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT 506 (512)
Q Consensus 459 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~ 506 (512)
|+.||.|++||+.+++....+..|..+|++++|+|||++||+++.||.
T Consensus 335 gs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 335 HSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp ETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred ECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 889999999999999988888889999999999999999999998875
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-34 Score=273.03 Aligned_cols=262 Identities=14% Similarity=0.151 Sum_probs=209.4
Q ss_pred ccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCc-----ceeEEE
Q 010362 196 VEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE-----TVLCIE 270 (512)
Q Consensus 196 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~ 270 (512)
.++.........+..+|...|.+++|||+|++||+++.||.|++||.+. ... .+. |.. .|.+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~--------~l~-~~~~~~~~sv~sva 136 (588)
T 2j04_A 68 KLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLT--------NLD-SKGNLSSRTYHCFE 136 (588)
T ss_dssp TTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEE--------ECC-CSSCSTTTCEEEEE
T ss_pred eEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eee--------ecc-CCCccccccEEEEE
Confidence 3333333333344446788999999999999999999999999999543 222 122 333 599999
Q ss_pred EcCCCCeEEEEeCCCeEEEEEccCCee-------eEEec---cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCce
Q 010362 271 FSRDSEMLASGSQDGKIKVWRIRSGQC-------LRRLE---RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340 (512)
Q Consensus 271 ~s~~~~~l~s~~~dg~i~vwd~~~~~~-------~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~ 340 (512)
|||||++||+|+.||+|++||+.++.. +..+. .+|...|.+++|+||| +++++.|++|++||+.++..
T Consensus 137 fSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 137 WNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp ECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSS
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcc
Confidence 999999999999999999999998752 45552 4678899999999999 88889999999999988773
Q ss_pred ---eEEe-eCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEE--cCCCCCeEEE
Q 010362 341 ---LKEF-RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHL--FPKNPDHIVV 414 (512)
Q Consensus 341 ---~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~~ 414 (512)
..++ .+|...|.+++|+ |+.+++++ +++|++||+.+++...... +|...+..+.+ +|++ ..+++
T Consensus 215 ~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~------gh~~~V~~va~~~s~d~-~~La~ 284 (588)
T 2j04_A 215 QPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKT------GSLENFHIIPLNHEKES-TILLM 284 (588)
T ss_dssp CCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEEC------SCCSCCCEEEETTCSSC-EEEEE
T ss_pred ccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEc------CCCceEEEEEeeeCCCC-CEEEE
Confidence 3456 4788899999999 58899887 6999999999877632221 47789999999 8877 78999
Q ss_pred EcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCC
Q 010362 415 CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494 (512)
Q Consensus 415 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~ 494 (512)
++.+|. ++|..+ .+.++||+..+++. |+++++|+...+. ...+.+ ...|.+++|+||
T Consensus 285 a~edG~-klw~~d------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPd 341 (588)
T 2j04_A 285 SNKTSY-KVLLED------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPD 341 (588)
T ss_dssp CSSCEE-EEEESS------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTT
T ss_pred EcCCCC-EEEeec------------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCC
Confidence 999999 999877 15589999888774 9999999975554 445554 677999999999
Q ss_pred CCeEEEEEC
Q 010362 495 RNLLATYGE 503 (512)
Q Consensus 495 ~~~l~s~~~ 503 (512)
|..+|+++.
T Consensus 342 G~~lA~~~~ 350 (588)
T 2j04_A 342 GYSIAIVYD 350 (588)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEEe
Confidence 999999874
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.2e-31 Score=254.24 Aligned_cols=264 Identities=16% Similarity=0.169 Sum_probs=219.1
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeE-EEEeCCCeEEEEEccCCeeeEEeccc
Q 010362 226 QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEML-ASGSQDGKIKVWRIRSGQCLRRLERA 304 (512)
Q Consensus 226 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~ 304 (512)
.++++++.|+.|++||+.+++....+. +...+.+++|+|+++++ ++++.|+.|++||+.+++.+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~---------~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~-- 71 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIP---------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-- 71 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE---------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEee---------cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--
Confidence 467888999999999999988765443 33568999999999977 667789999999999999988876
Q ss_pred cccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCce
Q 010362 305 HSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRV-VTASSDCTVKVWDLKSTDC 382 (512)
Q Consensus 305 ~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~ 382 (512)
+...+.+++|+|+++++++++ .++.|++||+.+++.+..+..+. .+.+++|+|+++.+ ++++.++.|++||+.+++.
T Consensus 72 ~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 72 AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 334899999999999886554 67999999999999888887654 58999999999977 6778899999999999888
Q ss_pred eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe--
Q 010362 383 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-- 460 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-- 460 (512)
...+.. ...+.++.|+|++..+++++..++.|++||++.......... ...+..++|+|+|+++++++
T Consensus 151 ~~~~~~-------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~ 220 (391)
T 1l0q_A 151 INTVSV-------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV---EAAPSGIAVNPEGTKAYVTNVD 220 (391)
T ss_dssp EEEEEC-------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---SSEEEEEEECTTSSEEEEEEEC
T ss_pred EEEEec-------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec---CCCccceEECCCCCEEEEEecC
Confidence 777653 235689999999865667888999999999985443333222 34578999999999999988
Q ss_pred -CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeE-EEEECCCeEEEecC
Q 010362 461 -EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL-ATYGEDCTMKLWKP 512 (512)
Q Consensus 461 -~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~s~~~dg~i~iW~~ 512 (512)
.++.|++||+.+++.+..+..|. .+.+++|+|+++++ ++++.|+.|++||+
T Consensus 221 ~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 221 KYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp SSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 68999999999999998888765 57899999999877 67789999999984
No 109
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.2e-32 Score=251.39 Aligned_cols=218 Identities=21% Similarity=0.255 Sum_probs=177.6
Q ss_pred eeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC--eeeEEeccccccCeEEEEEec--CCCEEEEEeCCCcEEEE
Q 010362 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG--QCLRRLERAHSEGVTSLVFSR--DGSQILSTSFDSTARIH 333 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~i~ 333 (512)
.+.+|...|.+++|+|+|++||+|+.|++|++||+.++ +.+..+. +|..+|.+++|+| ++++|++|+.|++|++|
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 35579999999999999999999999999999999753 5667776 8999999999986 38999999999999999
Q ss_pred eCCCCc--eeEEeeCCccceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCC
Q 010362 334 GLKSGK--LLKEFRGHSSYVNDAIFTND--GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409 (512)
Q Consensus 334 d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 409 (512)
|+++++ .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..... ....+|...+.+++|+|...
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~----~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP----IIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC----EEEECCSSCEEEEEECCCC-
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee----eeeecccCccceEeecCCcc
Confidence 998874 56677889999999999997 88999999999999999987632111 11235677888888888641
Q ss_pred CeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe----eEEeccccCCC
Q 010362 410 DHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK----LEHLMKVHEKD 485 (512)
Q Consensus 410 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~----~~~~~~~h~~~ 485 (512)
.. .+ .....+++++|++|+.||.|++||+.+++ +...+.+|...
T Consensus 159 ~~------~~--------------------------~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~ 206 (297)
T 2pm7_B 159 EE------DG--------------------------EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (297)
T ss_dssp -------------------------------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred cc------cc--------------------------cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc
Confidence 10 00 00112457899999999999999998765 66788899999
Q ss_pred eEEEEEcCCC---CeEEEEECCCeEEEecC
Q 010362 486 VIGVTHHPHR---NLLATYGEDCTMKLWKP 512 (512)
Q Consensus 486 v~~v~~~p~~---~~l~s~~~dg~i~iW~~ 512 (512)
|.+++|+|++ .+|++++.||+|+|||+
T Consensus 207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred eEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 9999999984 89999999999999973
No 110
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=269.03 Aligned_cols=283 Identities=14% Similarity=0.192 Sum_probs=220.9
Q ss_pred eccCcccccccccccCc---cc-cceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcC---CCeeeccccccccc
Q 010362 185 LFRGTAAMKQDVEDMYP---TT-LSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYL---SGKLKKDLQYQADE 257 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~---~~-~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~---~~~~~~~~~~~~~~ 257 (512)
++.+..+....+|+... .. ......++|...|++++|+|++++|++|+.||+|++||+. +++...........
T Consensus 79 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~ 158 (437)
T 3gre_A 79 LITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIR 158 (437)
T ss_dssp EEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeE
Confidence 34444555666777654 22 2123444799999999999999999999999999999995 44443333222222
Q ss_pred eee--c--cCcceeEEE--EcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccc-cccCeEEEEEecCCCEEEEEeCCCcE
Q 010362 258 TFM--M--HDETVLCIE--FSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERA-HSEGVTSLVFSRDGSQILSTSFDSTA 330 (512)
Q Consensus 258 ~~~--~--h~~~v~~l~--~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v 330 (512)
.+. . +...+.++. +++++.+|++|+.||.|++||+.+++.+..+... |...|.+++|+|++++|++|+.||.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i 238 (437)
T 3gre_A 159 KINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGII 238 (437)
T ss_dssp EEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCE
T ss_pred EEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 222 1 556788888 6689999999999999999999999999888732 88999999999999999999999999
Q ss_pred EEEeCCCCceeEEee-CCccceeEEEEcC----CCCEEEEEeCCCcEEEEeCCCCceeeecCCCC---------------
Q 010362 331 RIHGLKSGKLLKEFR-GHSSYVNDAIFTN----DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP--------------- 390 (512)
Q Consensus 331 ~i~d~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------------- 390 (512)
++||+++++.+..+. .|...|.+++|+| ++.+|++++.||.|++||++++++...+....
T Consensus 239 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 239 DIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp EEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG
T ss_pred EEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc
Confidence 999999999998886 7888999996664 67799999999999999999988777665332
Q ss_pred ---CCCC--CCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeCC---------------------------
Q 010362 391 ---PLRG--GDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSG--------------------------- 437 (512)
Q Consensus 391 ---~~~~--~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~--------------------------- 437 (512)
...+ +...|.+++++ ++ .++++++.|+.|++||+.. .....+...
T Consensus 319 ~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (437)
T 3gre_A 319 EELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTS 396 (437)
T ss_dssp GGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC---
T ss_pred ccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEeccccc
Confidence 1122 77789999999 44 7999999999999999973 323322221
Q ss_pred -------cccCCcEEEEEECCC--CCEEEEEeCCCeEEEEE
Q 010362 438 -------KREGGDFVAACVSPK--GEWIYCVGEDRNLYCFS 469 (512)
Q Consensus 438 -------~~~~~~~~~~~~s~~--g~~l~~g~~dg~i~iwd 469 (512)
..+...|.+++++++ +.+|++|+.||.|++|+
T Consensus 397 ~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 397 THSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 125678999999887 88999999999999995
No 111
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=255.54 Aligned_cols=244 Identities=21% Similarity=0.344 Sum_probs=202.3
Q ss_pred eeeccCcceeEEEEcCC---CCeEEEEeCCCeEEEEEccC-CeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEE
Q 010362 258 TFMMHDETVLCIEFSRD---SEMLASGSQDGKIKVWRIRS-GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIH 333 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~---~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~ 333 (512)
.+.+|...|++++|+|+ |++|++|+.||.|++||+.+ +..+......|...|.+++|+|++++|++++.||.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 45679999999999999 59999999999999999997 655533334899999999999999999999999999999
Q ss_pred eCCCCceeEEeeCCccceeEEEE--cCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 334 GLKSGKLLKEFRGHSSYVNDAIF--TNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 334 d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
|+++++.+. +..|...|.+++| +|++++|++++.||.|++||+++++....+... ..+.++.+.+ ..
T Consensus 114 d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-------~~~~~~~~~~---~~ 182 (368)
T 3mmy_A 114 DLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-------ERCYCADVIY---PM 182 (368)
T ss_dssp ETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-------SCEEEEEEET---TE
T ss_pred EcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-------CCceEEEecC---Ce
Confidence 999888766 5569999999999 899999999999999999999999887776633 2556666654 57
Q ss_pred EEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCE----EEEEeCCCeEEEEEcCCC---eeEEeccccCC
Q 010362 412 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEW----IYCVGEDRNLYCFSHQSG---KLEHLMKVHEK 484 (512)
Q Consensus 412 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~----l~~g~~dg~i~iwd~~~~---~~~~~~~~h~~ 484 (512)
+++++.++.+.+|+++..................++++.+++.. +++|+.||.|++||+... .....+.+|..
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 88999999999999985443333333333445666666555544 999999999999999987 55667777765
Q ss_pred ------------CeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 485 ------------DVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 485 ------------~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.|++++|+|++++|++++.||.|++||.
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp C----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred ccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence 7999999999999999999999999984
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.3e-31 Score=261.51 Aligned_cols=274 Identities=20% Similarity=0.350 Sum_probs=215.4
Q ss_pred ccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcc
Q 010362 186 FRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265 (512)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~ 265 (512)
+.+..+....+|+.........+. +|.+.|.+++| ++++|++|+.||+|++||+.+++.... +.+|...
T Consensus 147 ~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~--------~~~h~~~ 215 (435)
T 1p22_A 147 VSGLRDNTIKIWDKNTLECKRILT-GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT--------LIHHCEA 215 (435)
T ss_dssp EEEESSSCEEEEESSSCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE--------ECCCCSC
T ss_pred EEEeCCCeEEEEeCCCCeEEEEEc-CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE--------EcCCCCc
Confidence 344555667788888877777776 89999999999 788999999999999999998876553 4459999
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEccCCeee---EEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeE
Q 010362 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL---RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLK 342 (512)
Q Consensus 266 v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~ 342 (512)
|.+++|++ ..+++|+.||.|++||+.++... ..+ .+|...|.+++| +++++++|+.||.|++||+++++.+.
T Consensus 216 v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~ 290 (435)
T 1p22_A 216 VLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVR 290 (435)
T ss_dssp EEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEe-cCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEE
Confidence 99999974 59999999999999999988755 344 478999999999 68899999999999999999999999
Q ss_pred EeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 343 EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 343 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
.+.+|...|.++.++ ++++++|+.||.|++||++++++...+. +|...+.++.+ ++..+++++.||.|+
T Consensus 291 ~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~~~~---~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 291 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLE------GHEELVRCIRF---DNKRIVSGAYDGKIK 359 (435)
T ss_dssp EEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEC---CSSEEEEEETTSCEE
T ss_pred EEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEe------CCcCcEEEEEe---cCCEEEEEeCCCcEE
Confidence 999999999999994 6799999999999999999998888775 56778999998 348899999999999
Q ss_pred EEecCCe----------EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEc
Q 010362 423 IMTLQGQ----------VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHH 492 (512)
Q Consensus 423 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~ 492 (512)
+||+... ....+.. +...+.+++| ++.+|++|+.||.|++||+.++....... ...+..++.|.
T Consensus 360 vwd~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 360 VWDLVAALDPRAPAGTLCLRTLVE---HSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp EEEHHHHTSTTSCTTTTEEEEECC---CSSCCCCEEE--CSSCEEECCSSSEEEEEC-----------------------
T ss_pred EEECCCCCCccccccchheeeccC---CCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCC-CCCCccceeee
Confidence 9998732 3444433 4566888888 78899999999999999998876554433 23345555554
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4e-30 Score=247.38 Aligned_cols=300 Identities=15% Similarity=0.208 Sum_probs=233.7
Q ss_pred cCcccccccccccCccccceEEEecCcCceEEEEECCCCCEE-EEEeCCCeEEEEEcCCCeeeccccccccceeeccCcc
Q 010362 187 RGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFL-VSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET 265 (512)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~ 265 (512)
.+.......+|+....+....+. +| ..+.+++|+|+|+++ ++++.|+.|++||+.+++....+. +...
T Consensus 7 s~~~d~~v~v~d~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~---------~~~~ 75 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTATIP-VG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP---------AGSS 75 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEE-CS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---------CSSS
T ss_pred EcCCCCEEEEEECCCCeEEEEee-cC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---------CCCC
Confidence 34444566778877777777765 44 458999999999987 667789999999999988765443 3348
Q ss_pred eeEEEEcCCCCeEEEEe-CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEE-EEEeCCCcEEEEeCCCCceeEE
Q 010362 266 VLCIEFSRDSEMLASGS-QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI-LSTSFDSTARIHGLKSGKLLKE 343 (512)
Q Consensus 266 v~~l~~s~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~v~i~d~~~~~~~~~ 343 (512)
+.+++|+|++++|++++ .++.|++||+.+++.+..+. +...+.+++|+|+++.+ ++++.++.|++||+.+++.+..
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 99999999999886554 67999999999999887775 45678999999999987 6777899999999999999888
Q ss_pred eeCCccceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc---CCC
Q 010362 344 FRGHSSYVNDAIFTNDGSRV-VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN---KTS 419 (512)
Q Consensus 344 ~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~~~ 419 (512)
+..+. .+.+++|+|+++.+ ++++.++.|++||+++++....+. +...+.+++++|++ ..+++++ .++
T Consensus 154 ~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-------~~~~~~~~~~~~~g-~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 154 VSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-------VEAAPSGIAVNPEG-TKAYVTNVDKYFN 224 (391)
T ss_dssp EECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-------CSSEEEEEEECTTS-SEEEEEEECSSCC
T ss_pred EecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-------cCCCccceEECCCC-CEEEEEecCcCCC
Confidence 87665 47999999999987 567788999999999988776664 34578899999988 5555555 789
Q ss_pred cEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEE-EEEeCCCeEEEEEcCCCeeEEeccccCCCeE---EEEEcCC
Q 010362 420 SIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWI-YCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI---GVTHHPH 494 (512)
Q Consensus 420 ~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l-~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~---~v~~~p~ 494 (512)
.+++||+. +.....+..+ ..+.+++|+|+|+++ ++++.|+.|++||+.+++++..+..|..+.. .+.+.|+
T Consensus 225 ~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (391)
T 1l0q_A 225 TVSMIDTGTNKITARIPVG----PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPV 300 (391)
T ss_dssp EEEEEETTTTEEEEEEECC----SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSS
T ss_pred cEEEEECCCCeEEEEEecC----CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccc
Confidence 99999998 4444444432 347889999999988 5667899999999999999888876654421 1222221
Q ss_pred --------------------C--CeEEEEECCCeEEEecC
Q 010362 495 --------------------R--NLLATYGEDCTMKLWKP 512 (512)
Q Consensus 495 --------------------~--~~l~s~~~dg~i~iW~~ 512 (512)
. -.+.+.+.|..+++|+.
T Consensus 301 ~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 340 (391)
T 1l0q_A 301 QPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDF 340 (391)
T ss_dssp CCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEEC
T ss_pred cccccccccccccccccccccceEEEEeCCCCceEEEEEC
Confidence 1 24666677889999974
No 114
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.3e-30 Score=235.26 Aligned_cols=282 Identities=12% Similarity=0.106 Sum_probs=186.8
Q ss_pred ceEEEEECCCCC---EEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe-CC-CeEEE
Q 010362 215 HAECARFSPDGQ---FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-QD-GKIKV 289 (512)
Q Consensus 215 ~v~~~~~s~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~d-g~i~v 289 (512)
.+.++.|-.-|- .+++++ ...|++|+..++. +.+..+++.+|..+|..+.+.||..-|+... .+ ..-.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v 114 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAW-----QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREI 114 (356)
T ss_dssp EEEEEEEC----CEEEEEEEE-SSEEEEEEESSSS-----BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEE
T ss_pred EEeeeeeccCCCCccEEEEec-cceEEEcccCCCc-----cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccce
Confidence 356677766554 677777 6799999998871 1122335556888888888888543222211 11 00011
Q ss_pred EEc--c-C----CeeeEEeccccccCeEEEEEecCCCEEEEEe--CCCcEEEEeC-CCCceeEEeeCCccceeEEEEcC-
Q 010362 290 WRI--R-S----GQCLRRLERAHSEGVTSLVFSRDGSQILSTS--FDSTARIHGL-KSGKLLKEFRGHSSYVNDAIFTN- 358 (512)
Q Consensus 290 wd~--~-~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~v~i~d~-~~~~~~~~~~~~~~~v~~~~~~~- 358 (512)
+-+ . . ++.+.. .+|...|.++ ++++.+.+++ .|+.|++|++ .+++.+..+.+|...++.++|+|
T Consensus 115 ~sla~spd~~~~~~~l~s--~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 115 RALFCSSDDESEKQVLLK--SGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp EEECC------CCEEEEE--EEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred EEEEECCCccccccEEEe--CCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 111 0 1 111111 1233334333 4555555533 5899999999 45788888889999999999999
Q ss_pred --CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCe-----------EEEEcCCCcEEEEe
Q 010362 359 --DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH-----------IVVCNKTSSIYIMT 425 (512)
Q Consensus 359 --~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------l~~~~~~~~i~~~~ 425 (512)
++..|++++.|++|+|||+++++++.++.... .+...+.+++|+|++... +++++.|+.+++||
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~---~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD---SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC------CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC---cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 77999999999999999999999999886322 123467788899976322 36678899999999
Q ss_pred cCCe-EEEEee--CCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeE-EEEEcCCCCeEEEE
Q 010362 426 LQGQ-VVKSFS--SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI-GVTHHPHRNLLATY 501 (512)
Q Consensus 426 ~~~~-~~~~~~--~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~ 501 (512)
.... .+..+. ....+...+....+ ++.++++|+.||+|+|||+.+++++.++.+|...+. +++|+||+++|+||
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE
T ss_pred CCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE
Confidence 9844 333321 11122233433333 488999999999999999999999999999987655 68999999999999
Q ss_pred ECCCeEEEecC
Q 010362 502 GEDCTMKLWKP 512 (512)
Q Consensus 502 ~~dg~i~iW~~ 512 (512)
+.|++|+|||+
T Consensus 345 S~D~TIklWd~ 355 (356)
T 2w18_A 345 QKDGNIFVYHY 355 (356)
T ss_dssp CTTSCEEEEEE
T ss_pred ECCCcEEEecC
Confidence 99999999984
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.4e-30 Score=240.45 Aligned_cols=264 Identities=18% Similarity=0.258 Sum_probs=216.3
Q ss_pred cccccccccCccccceEEEe-cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEE
Q 010362 191 AMKQDVEDMYPTTLSHTIKF-GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269 (512)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l 269 (512)
+....+|+....++.+.+.. +|...|++++|+|+|++||+|+.||+|++||+.+++.... +.+|...+.++
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~--------~~~h~~~~~~~ 115 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN--------MTSHSARVGSL 115 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--------EECCSSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE--------ecCccceEEEe
Confidence 44577899888888887763 6888999999999999999999999999999999886653 44588888776
Q ss_pred EEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCce----eEEee
Q 010362 270 EFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL----LKEFR 345 (512)
Q Consensus 270 ~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~----~~~~~ 345 (512)
.+ ++..+++++.++.+++|+..++.........|...+..+.++++++++++++.||.|++||+++++. .....
T Consensus 116 ~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 193 (318)
T 4ggc_A 116 SW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT 193 (318)
T ss_dssp EE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEEC
T ss_pred ec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeec
Confidence 65 4679999999999999999877554443348999999999999999999999999999999987653 34556
Q ss_pred CCccceeEEEEcCCCCEE---EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEE-EcCCCcE
Q 010362 346 GHSSYVNDAIFTNDGSRV---VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-CNKTSSI 421 (512)
Q Consensus 346 ~~~~~v~~~~~~~~~~~l---~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~~~~i 421 (512)
.+.+.|.++.++|++..+ ++++.+++|++||.+......... +...+..+.+.|.+..++++ ++.|+.|
T Consensus 194 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~sg~~d~~i 266 (318)
T 4ggc_A 194 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-------AHSQVCSILWSPHYKELISGHGFAQNQL 266 (318)
T ss_dssp CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-------CSSCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-------ceeeeeeeeecccccceEEEEEcCCCEE
Confidence 678889999999976533 456778999999999887666544 45678899999988555443 3479999
Q ss_pred EEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe
Q 010362 422 YIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 422 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~ 474 (512)
++||++ +..+..+.. |...|.+++|+|+|++|++|+.||.|++||+.+..
T Consensus 267 ~iwd~~~~~~~~~l~g---H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 267 VIWKYPTMAKVAELKG---HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEETTTCCEEEEECC---CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999998 555555543 46789999999999999999999999999987653
No 116
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8e-32 Score=255.90 Aligned_cols=253 Identities=13% Similarity=0.105 Sum_probs=194.3
Q ss_pred cCcCceEEEEECCCCCEEEEE-----------eCCCeEEEEEcCCCeeec-cccccccceeeccCcceeEEEEcCCCCeE
Q 010362 211 GTKSHAECARFSPDGQFLVSC-----------SFDGFIEVWDYLSGKLKK-DLQYQADETFMMHDETVLCIEFSRDSEML 278 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg-----------~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~h~~~v~~l~~s~~~~~l 278 (512)
+|...|.|++++ ++.+++| +.|+.+++|++....... ............+...+.+++|+|||+++
T Consensus 71 ~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~l 148 (365)
T 4h5i_A 71 DNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVA 148 (365)
T ss_dssp TTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCE
T ss_pred CCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEE
Confidence 678888888764 4566665 357789999986543211 11111111223356679999999999998
Q ss_pred EEEe--CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEE--eeCCccceeEE
Q 010362 279 ASGS--QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE--FRGHSSYVNDA 354 (512)
Q Consensus 279 ~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~--~~~~~~~v~~~ 354 (512)
++++ .|++|+|||+.+++.+..+. |...|.+++|+|||+++++++. +.+.+|+..+++.+.. ...|...|.++
T Consensus 149 a~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v 225 (365)
T 4h5i_A 149 AIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKI 225 (365)
T ss_dssp EEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEE
T ss_pred EEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEE
Confidence 7554 68999999999999988875 7788999999999999999984 5567777777776543 45688899999
Q ss_pred EEcCCCCEEEEEeCCC----cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-Ce
Q 010362 355 IFTNDGSRVVTASSDC----TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQ 429 (512)
Q Consensus 355 ~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~ 429 (512)
+|+|+++.+++++.|+ .++.||+......... .....++...|++++|+|++ .++++++.|+.|++||+. ++
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLR--SKQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEE--EEEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTTTE
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceeccee--eeeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCCCc
Confidence 9999999999999887 6888988765432111 11123567789999999988 899999999999999998 45
Q ss_pred EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Q 010362 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG 473 (512)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~ 473 (512)
.+..+... |...|++++|+|||++|++|+.|++|+|||+...
T Consensus 303 ~~~~~~~g--H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 303 MSKIFKQA--HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEETTS--SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEEecCc--ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 55555433 4678999999999999999999999999999643
No 117
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-31 Score=249.42 Aligned_cols=223 Identities=19% Similarity=0.240 Sum_probs=175.9
Q ss_pred eeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCe--eeEEeccccccCeEEEEEec--CCCEEEEEeCCCcEEEE
Q 010362 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ--CLRRLERAHSEGVTSLVFSR--DGSQILSTSFDSTARIH 333 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~i~ 333 (512)
.+.+|...|++++|+|+|++|++|+.|++|++||+.++. .+..+. +|...|.+++|+| ++++|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 345799999999999999999999999999999998875 345565 8999999999986 48999999999999999
Q ss_pred eCCCC--ceeEEeeCCccceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCC
Q 010362 334 GLKSG--KLLKEFRGHSSYVNDAIFTND--GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409 (512)
Q Consensus 334 d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 409 (512)
|++++ +....+.+|...|++++|+|+ +.+|++++.||+|++||++.+..... .....+|...+.++.|+|+..
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~---~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV---KKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE---CCBTTSSSSCBCCCEECCCCC
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce---eeeeccccCCcceEEEccccC
Confidence 99887 456678889999999999997 78999999999999999987632211 112245777888999998742
Q ss_pred CeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC---eeEEeccccCCCe
Q 010362 410 DHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG---KLEHLMKVHEKDV 486 (512)
Q Consensus 410 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~---~~~~~~~~h~~~v 486 (512)
..-+. +.. .+ ...+++++|++|+.|+.|++||+..+ +++..+.+|...|
T Consensus 164 ~~~~~----------~~~-------------~~-----~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 164 PGSLI----------DHP-------------SG-----QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV 215 (316)
T ss_dssp C----------------C-------------CS-----CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCE
T ss_pred Ccccc----------ccc-------------cc-----cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCce
Confidence 10000 000 00 01234678999999999999999765 5677889999999
Q ss_pred EEEEEcCCC----CeEEEEECCCeEEEecC
Q 010362 487 IGVTHHPHR----NLLATYGEDCTMKLWKP 512 (512)
Q Consensus 487 ~~v~~~p~~----~~l~s~~~dg~i~iW~~ 512 (512)
++++|+|++ .+|++|+.||+|++|+.
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred EEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 999999986 78999999999999974
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=7e-30 Score=241.75 Aligned_cols=231 Identities=12% Similarity=0.136 Sum_probs=185.4
Q ss_pred eeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEE-EEEeCCCcEEEEeCCC
Q 010362 259 FMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQI-LSTSFDSTARIHGLKS 337 (512)
Q Consensus 259 ~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~v~i~d~~~ 337 (512)
...|...|.+++|+|||++|++|+.+| +++||+.+++...... ...+..+++.++++.+ ++++.|+.|++||..+
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE---MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE---CSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee---cCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 355999999999999999999998765 7899999887665543 2358888999988887 4677789999999999
Q ss_pred CceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-ceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEE--
Q 010362 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKST-DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV-- 414 (512)
Q Consensus 338 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-- 414 (512)
++.+..+. +...|.++.++++. ++++ .|+.|++||+.++ +.+..+.. +....++++ ..+++
T Consensus 91 ~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---------~~~~~~~s~---~~la~~s 154 (355)
T 3vu4_A 91 KQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---------FGGVCEFSN---GLLVYSN 154 (355)
T ss_dssp TEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---------EEEEEEEET---TEEEEEE
T ss_pred CcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---------CCceEEEEc---cEEEEeC
Confidence 99998887 56689999998863 4444 4789999999987 55544431 334455566 45555
Q ss_pred EcCCCcEEEEecCCeE-----------------EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCeeE
Q 010362 415 CNKTSSIYIMTLQGQV-----------------VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN-LYCFSHQSGKLE 476 (512)
Q Consensus 415 ~~~~~~i~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~-i~iwd~~~~~~~ 476 (512)
++.+|.|++||+.... ...+ ..|...+.+++|+|+|++|++|+.||+ |++||+.+++++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~---~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI---KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEE---CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEE---EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 6899999999998532 2222 335678999999999999999999998 999999999999
Q ss_pred Eecc-c-cCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 477 HLMK-V-HEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 477 ~~~~-~-h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
..+. + |...|++++|+|++++|++++.||+|++||.
T Consensus 232 ~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 232 REFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred EEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 9998 5 9999999999999999999999999999984
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.5e-30 Score=242.27 Aligned_cols=270 Identities=11% Similarity=0.064 Sum_probs=209.1
Q ss_pred eeeccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccc-c-ceee
Q 010362 183 FDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQA-D-ETFM 260 (512)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~-~~~~ 260 (512)
..++.+..+....+|+.........+. ...|.++.|+|+ +++|+.|++|++|+.........+.... . ....
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 345566677778889888887777775 467888999998 9999999999999876433222211111 1 1122
Q ss_pred ccCcceeEEEEcC--CCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC
Q 010362 261 MHDETVLCIEFSR--DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG 338 (512)
Q Consensus 261 ~h~~~v~~l~~s~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~ 338 (512)
+|...|.+++|+| +++++++|+.||+|++||+.+++........+...+.+++|+|++.+|++|+.||.|++||++++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 4668999999999 99999999999999999999999877665456778999999999999999999999999999999
Q ss_pred cee-EEeeC-CccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCcee--EEEEEcCCCCCeEEE
Q 010362 339 KLL-KEFRG-HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASV--NSVHLFPKNPDHIVV 414 (512)
Q Consensus 339 ~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~l~~ 414 (512)
+.+ ..+.. |..+|++++|+|++.+|++++ |+.|++||+++++....+.... .+...+ .+++|+|++ .++++
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g-~~l~~ 277 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYT---IPEFKTGTVTYDIDDSG-KNMIA 277 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCB---C-----CCEEEEECTTS-SEEEE
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccc---cccccccceEEEECCCC-CEEEE
Confidence 887 78888 999999999999999999999 5599999999987766554321 122233 469999988 77888
Q ss_pred EcC-CCcEEEEecCCe--EEEEeeCCcccCCcEEEEEECC---CCCEEEEEeCCCeEEEEEcC
Q 010362 415 CNK-TSSIYIMTLQGQ--VVKSFSSGKREGGDFVAACVSP---KGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 415 ~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~---~g~~l~~g~~dg~i~iwd~~ 471 (512)
++. ++.+++|++... .... .++..++|++ ++..+++++.||.+.++-..
T Consensus 278 ~s~~d~~i~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTKNWTK--------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EETTTTEEEEEEECTTTCSEEE--------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred ecCCCCcEEEEEEcccccceEe--------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 777 999999998632 1111 3466788888 88999999999999887543
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=6.7e-31 Score=252.37 Aligned_cols=252 Identities=13% Similarity=0.095 Sum_probs=175.6
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcC--------CCCeEEEEe
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSR--------DSEMLASGS 282 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~--------~~~~l~s~~ 282 (512)
.|...+....+++++.+||+|+.|++|+|||..+++.... .....+.+|.+.|++++|+| |+++||+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~---~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQ---HVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEE---EEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcccee---eeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 4444455555666788999999999999999988765432 22235678999999999998 789999999
Q ss_pred CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCceeEE------------------
Q 010362 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGS-QILSTSFDSTARIHGLKSGKLLKE------------------ 343 (512)
Q Consensus 283 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~~~~------------------ 343 (512)
.|++|+|||+.++..+..+. .|..++.+++|+|++. +|++|+.||+|++||+++++....
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~ 242 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTL 242 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESG
T ss_pred CCCeEEEEECCCCceeeeec-CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccc
Confidence 99999999999888777776 7889999999999874 799999999999999988754332
Q ss_pred -------eeCCccceeEEEEc-CCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCC------------CCCceeEEEE
Q 010362 344 -------FRGHSSYVNDAIFT-NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR------------GGDASVNSVH 403 (512)
Q Consensus 344 -------~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------------~~~~~i~~~~ 403 (512)
..+|...+.++.|+ |+++.+++++.|+++++||+.++.....+....... ..........
T Consensus 243 ~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
T 4gq1_A 243 PLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGAC 322 (393)
T ss_dssp GGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCE
T ss_pred cceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEE
Confidence 23577788899986 799999999999999999998876554433211000 0011112233
Q ss_pred EcCC-CCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q 010362 404 LFPK-NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSH 470 (512)
Q Consensus 404 ~~~~-~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~ 470 (512)
++|. +..++++++.|+.|++||.. +........ +...|.+++|+|||++|++++.+| +.+|.+
T Consensus 323 ~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp ECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 4443 33456778889999999998 444333333 345799999999999999998776 445543
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=248.86 Aligned_cols=243 Identities=16% Similarity=0.192 Sum_probs=201.3
Q ss_pred CcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCe---eeEEecc------------------------------------
Q 010362 263 DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ---CLRRLER------------------------------------ 303 (512)
Q Consensus 263 ~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~------------------------------------ 303 (512)
..++.+++|+|+|++|+++ .++.|++||+.+|+ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999966665 57899999999998 5554431
Q ss_pred -----------------ccccCeEEEEEecCCCEE-EEEeCCCcEEEEeCC--CCceeEEee--CCccceeEEEEcCCCC
Q 010362 304 -----------------AHSEGVTSLVFSRDGSQI-LSTSFDSTARIHGLK--SGKLLKEFR--GHSSYVNDAIFTNDGS 361 (512)
Q Consensus 304 -----------------~~~~~i~~~~~~~~~~~l-~~~~~dg~v~i~d~~--~~~~~~~~~--~~~~~v~~~~~~~~~~ 361 (512)
.|...|.+++|+|++++| ++|+.||.|++||+. +++.+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 123369999999999996 889999999999999 888888876 5678899999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCC--CCCeEEEEcCCCcEEEEecC-CeEEEEeeCCc
Q 010362 362 RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK--NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK 438 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~ 438 (512)
+|++++.+|.|++|++.++..... ....+.+|...|.+++|+|+ +..++++++.|+.|++||+. +.....+...
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~- 239 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKF--TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG- 239 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSC--CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC-
T ss_pred EEEEEeCCCcEEEEecCCcccccc--cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC-
Confidence 999999999999999988764430 11233467889999999998 23799999999999999998 4444443322
Q ss_pred ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecccc-------------------------CCCeEEEEEcC
Q 010362 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH-------------------------EKDVIGVTHHP 493 (512)
Q Consensus 439 ~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-------------------------~~~v~~v~~~p 493 (512)
+...+.+++|+ +|++|++|+.|+.|++||+.+++++..+..+ ...|.+++|+|
T Consensus 240 -h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 240 -HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp -CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred -CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 45779999999 9999999999999999999999988777532 35689999999
Q ss_pred CCCeEEEEE-CCCeEEEec
Q 010362 494 HRNLLATYG-EDCTMKLWK 511 (512)
Q Consensus 494 ~~~~l~s~~-~dg~i~iW~ 511 (512)
+++++++++ .|+.|++|+
T Consensus 318 ~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp SSSEEEEEETTCSEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEE
Confidence 999999999 899999997
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=7.2e-30 Score=241.19 Aligned_cols=284 Identities=13% Similarity=0.175 Sum_probs=197.5
Q ss_pred eccCcccccccccccCccc----cceEEEecCcCceEEEEECC--CCCEEEEEeCCCeEEEEEcCCCeeeccc-cccccc
Q 010362 185 LFRGTAAMKQDVEDMYPTT----LSHTIKFGTKSHAECARFSP--DGQFLVSCSFDGFIEVWDYLSGKLKKDL-QYQADE 257 (512)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~h~~~v~~~~~s~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~~ 257 (512)
++.+..+....+|+..... ....+. +|...|++++|+| ++++|++|+.||.|++||+.++...... ......
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~ 104 (351)
T 3f3f_A 26 VATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLC 104 (351)
T ss_dssp EEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEE
T ss_pred EEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceee
Confidence 3444455567777776542 344444 8999999999999 6999999999999999999876432110 112233
Q ss_pred eeeccCcceeEEEEcCC--CCeEEEEeCCCeEEEEEccCCeeeEEec------------cccccCeEEEEEecC---CCE
Q 010362 258 TFMMHDETVLCIEFSRD--SEMLASGSQDGKIKVWRIRSGQCLRRLE------------RAHSEGVTSLVFSRD---GSQ 320 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~------------~~~~~~i~~~~~~~~---~~~ 320 (512)
.+.+|...|.+++|+|+ +.+|++++.||.|++||+.+++.+..+. ..+...+.+++|+|+ +..
T Consensus 105 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 184 (351)
T 3f3f_A 105 TLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK 184 (351)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE
T ss_pred eecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE
Confidence 55679999999999999 9999999999999999998877544332 157788999999997 999
Q ss_pred EEEEeCCCcEEEEeCCCCce--eEEeeCCccceeEEEEcCCC----CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCC
Q 010362 321 ILSTSFDSTARIHGLKSGKL--LKEFRGHSSYVNDAIFTNDG----SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRG 394 (512)
Q Consensus 321 l~~~~~dg~v~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 394 (512)
+++++.++.+.+|+...++. +..+.+|...|++++|+|++ ++|++++.||.|++||++++.........
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----- 259 (351)
T 3f3f_A 185 LAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEES----- 259 (351)
T ss_dssp EEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------
T ss_pred EEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCc-----
Confidence 99999999998888877765 67788899999999999998 89999999999999999876443322211
Q ss_pred CCceeEEEEEcCCCCCeEEE----EcCCCcEEEEecCC-eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q 010362 395 GDASVNSVHLFPKNPDHIVV----CNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFS 469 (512)
Q Consensus 395 ~~~~i~~~~~~~~~~~~l~~----~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd 469 (512)
..........+.. ..... +.....+.+|+... .....+ ..+...+.+++|+|++++|++|+.||.|++||
T Consensus 260 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 260 -LTNSNMFDNSADV-DMDAQGRSDSNTEEKAELQSNLQVELLSEH---DDHNGEVWSVSWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp ---------------------------------CCSEEEEEEEEE---CTTSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred -ccceeccCCCccc-ccccccccccccceeeeecccccccEEEEE---ecccccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 1111111111111 11111 22223334443332 222222 23567799999999999999999999999999
Q ss_pred cCCCeeEEec
Q 010362 470 HQSGKLEHLM 479 (512)
Q Consensus 470 ~~~~~~~~~~ 479 (512)
+.+++....+
T Consensus 335 ~~~~~~~~~~ 344 (351)
T 3f3f_A 335 ATYSNEFKCM 344 (351)
T ss_dssp ECTTSCEEEE
T ss_pred cCcCcchhhe
Confidence 9987655443
No 123
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=243.08 Aligned_cols=219 Identities=22% Similarity=0.264 Sum_probs=178.9
Q ss_pred ceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc--CCeeeEEeccccccCeEEEEEecC--CCEEEEEeCCCcEEE
Q 010362 257 ETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR--SGQCLRRLERAHSEGVTSLVFSRD--GSQILSTSFDSTARI 332 (512)
Q Consensus 257 ~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~i 332 (512)
..+.+|...|++++|+|++++|++|+.||.|++||+. +++.+..+. .|...|.+++|+|+ +.+|++|+.||.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-CCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 4567899999999999999999999999999999998 556666775 89999999999977 999999999999999
Q ss_pred EeCCCCc--eeEEeeCCccceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCC
Q 010362 333 HGLKSGK--LLKEFRGHSSYVNDAIFTND--GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKN 408 (512)
Q Consensus 333 ~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 408 (512)
||+.+++ .+..+..|...|.+++|+|+ +.++++++.||.|++||++++....... ...+...+.++.|+|..
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII----IDAHAIGVNSASWAPAT 159 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE----EECCTTCEEEEEECCCC
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE----ecCCCCceEEEEEcCcc
Confidence 9999887 67788889999999999999 9999999999999999998764322211 11344555666655542
Q ss_pred CCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe----eEEeccccCC
Q 010362 409 PDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK----LEHLMKVHEK 484 (512)
Q Consensus 409 ~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~----~~~~~~~h~~ 484 (512)
... .......+++.++++|+.||.|++||+.++. +...+.+|..
T Consensus 160 ~~~--------------------------------~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~ 207 (379)
T 3jrp_A 160 IEE--------------------------------DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 207 (379)
T ss_dssp ------------------------------------------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred ccc--------------------------------cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC
Confidence 000 0011124589999999999999999998764 5567788999
Q ss_pred CeEEEEEcCC---CCeEEEEECCCeEEEecC
Q 010362 485 DVIGVTHHPH---RNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 485 ~v~~v~~~p~---~~~l~s~~~dg~i~iW~~ 512 (512)
.|.+++|+|+ +.+|++++.||.|++||.
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 9999999999 899999999999999983
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=4.6e-28 Score=236.32 Aligned_cols=283 Identities=9% Similarity=0.011 Sum_probs=218.2
Q ss_pred cCcCceEEEE---ECCCCCEEEEEe--------------CCCeEEEEEcC--CCeeeccccccccceeeccCcceeEEEE
Q 010362 211 GTKSHAECAR---FSPDGQFLVSCS--------------FDGFIEVWDYL--SGKLKKDLQYQADETFMMHDETVLCIEF 271 (512)
Q Consensus 211 ~h~~~v~~~~---~s~~~~~l~sg~--------------~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 271 (512)
.....+..++ |+|++..++..+ .++.+.||.++ ++.... ...+. ....+.+++|
T Consensus 58 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~------~~~~~-~~~~~~~~~~ 130 (433)
T 3bws_A 58 DKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRF------ISRFK-TGFQPKSVRF 130 (433)
T ss_dssp ETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEE------EEEEE-CSSCBCCCEE
T ss_pred ccCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceE------EEEEc-CCCCceEEEE
Confidence 3445567777 888777665433 23323444433 232111 11122 3345679999
Q ss_pred cCCCCeEEEEeCCCeEEEEEccCCeeeEEec----cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCC
Q 010362 272 SRDSEMLASGSQDGKIKVWRIRSGQCLRRLE----RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH 347 (512)
Q Consensus 272 s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 347 (512)
+|++.++++++.++.|++||+.+++...... ..|...|.+++|+|++..+++++.|+.|++||+++++.+..+..|
T Consensus 131 s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~ 210 (433)
T 3bws_A 131 IDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT 210 (433)
T ss_dssp SSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS
T ss_pred eCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC
Confidence 9988888888889999999999998876432 257789999999999999999999999999999999999999999
Q ss_pred ccceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc--------CC
Q 010362 348 SSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN--------KT 418 (512)
Q Consensus 348 ~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--------~~ 418 (512)
...+.+++|+|+++.+++++ .|+.|++||+++++....+.. ...+.+++++|++ ..+++++ .+
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~g-~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 211 GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-------IGLPRGLLLSKDG-KELYIAQFSASNQESGG 282 (433)
T ss_dssp SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-------CSEEEEEEECTTS-SEEEEEEEESCTTCSCC
T ss_pred CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-------CCCceEEEEcCCC-CEEEEEECCCCccccCC
Confidence 99999999999999885554 799999999999887776653 3458999999988 5666655 58
Q ss_pred CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEE-EEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCe
Q 010362 419 SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWI-YCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNL 497 (512)
Q Consensus 419 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l-~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 497 (512)
+.|++||+.......... +...+..++|+|+++.+ ++++.++.|++||+.+++.+..+. +...+.+++|+|++++
T Consensus 283 g~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~ 358 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIG---PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKY 358 (433)
T ss_dssp EEEEEEETTTTEEEEEEE---EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSE
T ss_pred CeEEEEECCCCcEEeecc---CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCE
Confidence 899999998543333222 12357889999999765 556799999999999999888776 6778999999999998
Q ss_pred EEEEEC---------------CCeEEEecC
Q 010362 498 LATYGE---------------DCTMKLWKP 512 (512)
Q Consensus 498 l~s~~~---------------dg~i~iW~~ 512 (512)
+++++. ||.|++||+
T Consensus 359 l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 359 LYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp EEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred EEEEecCCCccccccccccccceEEEEEEC
Confidence 888876 579999985
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=4.9e-27 Score=233.56 Aligned_cols=309 Identities=13% Similarity=0.128 Sum_probs=237.1
Q ss_pred ccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEc--CCCeeeccccccccceeeccC
Q 010362 186 FRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDY--LSGKLKKDLQYQADETFMMHD 263 (512)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~h~ 263 (512)
+.+.......+++....++..++..++. +.+++|+|+|++|++++.|++|.+||+ .+++....+. +.
T Consensus 153 vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~---------~g 221 (543)
T 1nir_A 153 VTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK---------IG 221 (543)
T ss_dssp EEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE---------CC
T ss_pred EEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe---------cC
Confidence 3344455677788888888888876665 889999999999999999999999999 7776655433 45
Q ss_pred cceeEEEEcC----CCCeEEEEeC-CCeEEEEEccCCeeeEEeccc---------c-ccCeEEEEEecCCCEE-EEEeCC
Q 010362 264 ETVLCIEFSR----DSEMLASGSQ-DGKIKVWRIRSGQCLRRLERA---------H-SEGVTSLVFSRDGSQI-LSTSFD 327 (512)
Q Consensus 264 ~~v~~l~~s~----~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~---------~-~~~i~~~~~~~~~~~l-~~~~~d 327 (512)
..+..++|+| ||+++++++. +++|.+||..+++++..+... | ...+.++.++|++..+ ++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 6689999999 9999999885 899999999999988887531 2 2378999999977654 556678
Q ss_pred CcEEEEeCCCCceeE--EeeCCccceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEE
Q 010362 328 STARIHGLKSGKLLK--EFRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHL 404 (512)
Q Consensus 328 g~v~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 404 (512)
+.|.+||+.+.+.+. .+. +...+.++.|+|+|+++++++ .+++|.+||..++++...+.... ..|......+ +
T Consensus 302 g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~--~ph~g~g~~~-~ 377 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK--TPHPGRGANF-V 377 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SBCCTTCEEE-E
T ss_pred CeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC--CCCCCCCccc-C
Confidence 999999998876544 443 556788999999999877655 58899999999999887765321 1122222222 4
Q ss_pred cCCCCCeEEEEc-CCCcEEEEecCC--------eEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-------CCCeEEEE
Q 010362 405 FPKNPDHIVVCN-KTSSIYIMTLQG--------QVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-------EDRNLYCF 468 (512)
Q Consensus 405 ~~~~~~~l~~~~-~~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-------~dg~i~iw 468 (512)
+|++...++++. .++.|.+||... +.+..+... +.....+.++|+|++|++++ .++.|.+|
T Consensus 378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~---g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~ 454 (543)
T 1nir_A 378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQ---GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 454 (543)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS---CSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEE
T ss_pred CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcC---CCCceEEEcCCCCCcEEEecCCCCCcccCceEEEE
Confidence 677556777775 689999999974 445555432 34466789999999999987 26799999
Q ss_pred EcCCCeeE-Eec--------cccCCCeEEEEEcCCCCeEEEEE-----CCCeEEEecC
Q 010362 469 SHQSGKLE-HLM--------KVHEKDVIGVTHHPHRNLLATYG-----EDCTMKLWKP 512 (512)
Q Consensus 469 d~~~~~~~-~~~--------~~h~~~v~~v~~~p~~~~l~s~~-----~dg~i~iW~~ 512 (512)
|+.+++.. ..+ ..+...+..+.|+|+|+.++.+. .|+.|.|||.
T Consensus 455 d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 455 DLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp ETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred ECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence 99998866 443 34567899999999999887653 4799999985
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-28 Score=256.03 Aligned_cols=218 Identities=22% Similarity=0.269 Sum_probs=177.8
Q ss_pred eeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc--CCeeeEEeccccccCeEEEEEecC--CCEEEEEeCCCcEEEE
Q 010362 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR--SGQCLRRLERAHSEGVTSLVFSRD--GSQILSTSFDSTARIH 333 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~i~ 333 (512)
.+.+|.+.|++++|+|++++|++|+.||+|++||+. ++.....+. +|..+|.+++|+|+ +++|++|+.||.|++|
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc-CCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 456799999999999999999999999999999998 456666775 89999999999988 9999999999999999
Q ss_pred eCCCCc--eeEEeeCCccceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCC
Q 010362 334 GLKSGK--LLKEFRGHSSYVNDAIFTND--GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNP 409 (512)
Q Consensus 334 d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 409 (512)
|+.+++ .+..+.+|...|++++|+|+ ++.+++|+.||.|++||++++....... ..++...+.++.|+|...
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~----~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII----IDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE----EECCSSCEEEEEECCCC-
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE----eecCCCceEEEEecCccc
Confidence 999886 67788889999999999999 9999999999999999998764322111 123455666666665420
Q ss_pred CeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC----eeEEeccccCCC
Q 010362 410 DHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG----KLEHLMKVHEKD 485 (512)
Q Consensus 410 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~----~~~~~~~~h~~~ 485 (512)
. ........+++.++++|+.||.|++||+.++ .+...+.+|.+.
T Consensus 159 ~--------------------------------~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 159 E--------------------------------EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp ----------------------------------------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred c--------------------------------cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 0 0001112457899999999999999999877 566778899999
Q ss_pred eEEEEEcCC---CCeEEEEECCCeEEEecC
Q 010362 486 VIGVTHHPH---RNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 486 v~~v~~~p~---~~~l~s~~~dg~i~iW~~ 512 (512)
|++++|+|+ +.++++|+.||.|++||+
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 999999999 899999999999999984
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.1e-27 Score=231.19 Aligned_cols=278 Identities=16% Similarity=0.212 Sum_probs=211.7
Q ss_pred CceEEEEECCCCC-EEEEEe----CCC----eEEEEEc--CCCeeeccccccccceeeccCcceeEEEEcC---------
Q 010362 214 SHAECARFSPDGQ-FLVSCS----FDG----FIEVWDY--LSGKLKKDLQYQADETFMMHDETVLCIEFSR--------- 273 (512)
Q Consensus 214 ~~v~~~~~s~~~~-~l~sg~----~dg----~i~iwd~--~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~--------- 273 (512)
..+...+|++.|. ++++|+ .|| +|++||+ .+++.+.. ..+.+|...+..+++++
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~~~~~~~ 136 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ------NSYKVNKQWLRYAGHTASDEVFEKLT 136 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEE------EEEEECGGGHHHHHHHHHHHHHHHHH
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEee------eEEEcChhHHHHHHHHHHHHHHHHHc
Confidence 4577778888774 666776 467 9999999 88775432 13456777777777764
Q ss_pred -----CCCeEEEEeCC------CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCC---cEEEEeCCCCc
Q 010362 274 -----DSEMLASGSQD------GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS---TARIHGLKSGK 339 (512)
Q Consensus 274 -----~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~v~i~d~~~~~ 339 (512)
.+..++.++.+ +.|++||+.. .....+. .|...+.+++|+|||+.|++++.++ .|++||+.+++
T Consensus 137 g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~-~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~ 214 (415)
T 2hqs_A 137 GIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA 214 (415)
T ss_dssp SSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred CCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEe-CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc
Confidence 25667766654 7999999974 4455554 6888999999999999999999875 99999999887
Q ss_pred eeEEeeCCccceeEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc
Q 010362 340 LLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCT--VKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 416 (512)
Q Consensus 340 ~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 416 (512)
.. .+..|...+.+++|+|+|+.|+ +++.++. |++||+.+++.. .+. .+...+.++.|+|++..+++++.
T Consensus 215 ~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~------~~~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 215 VR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT------DGRSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp EE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC------CCSSCEEEEEECTTSSEEEEEEC
T ss_pred EE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc------CCCCcccceEECCCCCEEEEEEC
Confidence 75 5667888899999999999887 6666654 999999987653 222 34567899999999844444444
Q ss_pred CCC--cEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC---CeEEEEEcCCCeeEEeccccCCCeEEEEE
Q 010362 417 KTS--SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED---RNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491 (512)
Q Consensus 417 ~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~v~~ 491 (512)
.++ .|++||..+.....+.. +...+..++|+|+|++|++++.+ +.|++||+.+++.. .+..|. .+.+++|
T Consensus 287 ~~g~~~i~~~d~~~~~~~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~ 361 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGAPQRITW---EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSL 361 (415)
T ss_dssp TTSSCEEEEEETTSSCCEECCC---SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEec---CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEE
Confidence 455 67888888655444332 23467889999999999988864 58999999998875 455454 8999999
Q ss_pred cCCCCeEEEEECCC---eEEEecC
Q 010362 492 HPHRNLLATYGEDC---TMKLWKP 512 (512)
Q Consensus 492 ~p~~~~l~s~~~dg---~i~iW~~ 512 (512)
+|++++|++++.|+ .|++||+
T Consensus 362 spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 362 APNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp CTTSSEEEEEEEETTEEEEEEEET
T ss_pred cCCCCEEEEEEcCCCccEEEEEEC
Confidence 99999999888777 7999874
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=5.7e-27 Score=226.30 Aligned_cols=277 Identities=14% Similarity=0.123 Sum_probs=213.8
Q ss_pred ccccccc--Cccccc--eEEEecCcCceEEEEECC--------------CCCEEEEEeCC------CeEEEEEcCCCeee
Q 010362 193 KQDVEDM--YPTTLS--HTIKFGTKSHAECARFSP--------------DGQFLVSCSFD------GFIEVWDYLSGKLK 248 (512)
Q Consensus 193 ~~~~~~~--~~~~~~--~~~~~~h~~~v~~~~~s~--------------~~~~l~sg~~d------g~i~iwd~~~~~~~ 248 (512)
...+|+. ...+.. ..+. +|...+.++++++ .+..++.++.+ +.|++||++.+..
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~- 171 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYK-VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ- 171 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEE-ECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC-
T ss_pred EEEEEeCCCCCCCEEeeeEEE-cChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC-
Confidence 4567777 666554 2343 7888888877765 26677766654 7999999875332
Q ss_pred ccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC---eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEE-EE
Q 010362 249 KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG---KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQIL-ST 324 (512)
Q Consensus 249 ~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~ 324 (512)
..+.+|...|.+++|+|||++|++++.++ .|++||+.+++... +. .+...+.+++|+|||+.|+ ++
T Consensus 172 --------~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~-~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 172 --------FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VA-SFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp --------EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EE-CCSSCEEEEEECTTSSEEEEEE
T ss_pred --------EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-ee-cCCCcccCEEEcCCCCEEEEEE
Confidence 24556889999999999999999999875 99999999998754 43 5778899999999999888 56
Q ss_pred eCCCc--EEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC-CC--cEEEEeCCCCceeeecCCCCCCCCCCcee
Q 010362 325 SFDST--ARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS-DC--TVKVWDLKSTDCLQTFKPPPPLRGGDASV 399 (512)
Q Consensus 325 ~~dg~--v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~i 399 (512)
+.++. |++||+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|.+||+.+++... +. .+...+
T Consensus 242 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~------~~~~~~ 313 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-IT------WEGSQN 313 (415)
T ss_dssp CTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CC------CSSSEE
T ss_pred ecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Ee------cCCCcc
Confidence 66654 99999988776 567778888999999999999988876 44 67778988776432 21 234578
Q ss_pred EEEEEcCCCCCeEEEEcCC---CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCC---eEEEEEcCCC
Q 010362 400 NSVHLFPKNPDHIVVCNKT---SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDR---NLYCFSHQSG 473 (512)
Q Consensus 400 ~~~~~~~~~~~~l~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg---~i~iwd~~~~ 473 (512)
.++.|+|++ ..+++++.+ ..|++||+.+.....+... ..+..++|+|+|++|++++.++ .|++||+. +
T Consensus 314 ~~~~~spdG-~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~----~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g 387 (415)
T 2hqs_A 314 QDADVSSDG-KFMVMVSSNGGQQHIAKQDLATGGVQVLSST----FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-G 387 (415)
T ss_dssp EEEEECTTS-SEEEEEEECSSCEEEEEEETTTCCEEECCCS----SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-S
T ss_pred cCeEECCCC-CEEEEEECcCCceEEEEEECCCCCEEEecCC----CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-C
Confidence 899999998 555555543 5899999986655554432 2688999999999999988776 89999987 5
Q ss_pred eeEEeccccCCCeEEEEEcCCC
Q 010362 474 KLEHLMKVHEKDVIGVTHHPHR 495 (512)
Q Consensus 474 ~~~~~~~~h~~~v~~v~~~p~~ 495 (512)
.....+..|.+.|.+++|+|..
T Consensus 388 ~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 388 RFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp CCEEECCCSSSEEEEEEECCCC
T ss_pred CcEEEeeCCCCCCcCCcccccc
Confidence 5567788899999999999954
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.3e-27 Score=214.19 Aligned_cols=191 Identities=17% Similarity=0.146 Sum_probs=144.0
Q ss_pred CCCCeEEEEe--CCCeEEEEEc-cCCeeeEEeccccccCeEEEEEec---CCCEEEEEeCCCcEEEEeCCCCceeEEeeC
Q 010362 273 RDSEMLASGS--QDGKIKVWRI-RSGQCLRRLERAHSEGVTSLVFSR---DGSQILSTSFDSTARIHGLKSGKLLKEFRG 346 (512)
Q Consensus 273 ~~~~~l~s~~--~dg~i~vwd~-~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~ 346 (512)
++++++.+++ .|+.|++|++ .+|+.+..+. .|...++.++|+| ++..|++|+.|++|++||+++++++.++.+
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~-~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g 221 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF-LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI 221 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE-ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeec-cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC
Confidence 4555555533 5899999999 4587777776 8899999999999 779999999999999999999999999987
Q ss_pred Ccc---ceeEEEEcCCCCEE------------EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 347 HSS---YVNDAIFTNDGSRV------------VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 347 ~~~---~v~~~~~~~~~~~l------------~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
|.. .+.+++|+|+|.++ ++|+.|++|++||..+++.+..+.... ..+|...+.+..++ ...
T Consensus 222 ~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~-p~Gh~~~~lsg~~s---g~~ 297 (356)
T 2w18_A 222 DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL-PPGQAGRFLEGDVK---DHC 297 (356)
T ss_dssp CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC-CTTCCCCEEEEEEE---TTE
T ss_pred CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec-cCCCcceeEccccC---CCE
Confidence 543 57777999999876 567889999999999998765442110 12333334444443 368
Q ss_pred EEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q 010362 412 IVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSH 470 (512)
Q Consensus 412 l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~ 470 (512)
+++++.|+.|++||+. ++....+..+. ...+..++|+|||++|++|+.|++|++||.
T Consensus 298 lASgS~DgTIkIWDl~tGk~l~tL~gH~--~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 298 AAAILTSGTIAIWDLLLGQCTALLPPVS--DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCC----CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEecCCC--CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 8999999999999999 55555554332 223446899999999999999999999985
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=2.1e-26 Score=229.00 Aligned_cols=274 Identities=13% Similarity=0.102 Sum_probs=217.8
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEc--cCCee
Q 010362 220 RFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI--RSGQC 297 (512)
Q Consensus 220 ~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~--~~~~~ 297 (512)
+|+|++.++++++.|++|.+||..+++....+.. ++. +.+++|+|||++|++++.|++|++||+ .+++.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~-------g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-------GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC-------STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec-------Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE
Confidence 3789999999999999999999999887765432 232 889999999999999999999999999 88988
Q ss_pred eEEeccccccCeEEEEEec----CCCEEEEEeC-CCcEEEEeCCCCceeEEeeCC----------c-cceeEEEEcCCCC
Q 010362 298 LRRLERAHSEGVTSLVFSR----DGSQILSTSF-DSTARIHGLKSGKLLKEFRGH----------S-SYVNDAIFTNDGS 361 (512)
Q Consensus 298 ~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~-dg~v~i~d~~~~~~~~~~~~~----------~-~~v~~~~~~~~~~ 361 (512)
+..+. +...+..++|+| ||+++++++. +++|.+||..+++++..+..+ . ..+.++.++|++.
T Consensus 215 ~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~ 292 (543)
T 1nir_A 215 VAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 292 (543)
T ss_dssp EEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS
T ss_pred EEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCC
Confidence 88876 456689999999 9999999885 899999999999998887652 2 2688999999776
Q ss_pred E-EEEEeCCCcEEEEeCCCCceee--ecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCC
Q 010362 362 R-VVTASSDCTVKVWDLKSTDCLQ--TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSG 437 (512)
Q Consensus 362 ~-l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~ 437 (512)
. +++...++.|.+||+.+.+... .+. +...+..+.|+|++..+++++..++.|.+||.. ++....+...
T Consensus 293 ~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-------~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g 365 (543)
T 1nir_A 293 EFIVNVKETGKVLLVNYKDIDNLTVTSIG-------AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG 365 (543)
T ss_dssp EEEEEETTTTEEEEEECTTSSSCEEEEEE-------CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred EEEEEECCCCeEEEEEecCCCcceeEEec-------cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccC
Confidence 5 5566778999999998865443 222 234566789999985566677789999999998 4555555433
Q ss_pred c-ccCCcEEEEEECCC-CCEEEEEe-CCCeEEEEEcCC-------CeeEEeccccCCCeEEEEEcCCCCeEEEEE-----
Q 010362 438 K-REGGDFVAACVSPK-GEWIYCVG-EDRNLYCFSHQS-------GKLEHLMKVHEKDVIGVTHHPHRNLLATYG----- 502 (512)
Q Consensus 438 ~-~~~~~~~~~~~s~~-g~~l~~g~-~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~----- 502 (512)
. .+.+....+ ++|+ |..++++. .|++|.+||+.+ .+.++++.+|.+.+..+++||++++|++++
T Consensus 366 ~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~ 444 (543)
T 1nir_A 366 KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPD 444 (543)
T ss_dssp SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSS
T ss_pred CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCC
Confidence 2 122222222 4777 56566665 689999999998 899999999998899999999999999987
Q ss_pred --CCCeEEEecC
Q 010362 503 --EDCTMKLWKP 512 (512)
Q Consensus 503 --~dg~i~iW~~ 512 (512)
.+++|.+||.
T Consensus 445 ~~~~~~v~v~d~ 456 (543)
T 1nir_A 445 ARISQSVAVFDL 456 (543)
T ss_dssp HHHHTCEEEEET
T ss_pred cccCceEEEEEC
Confidence 2789999984
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=3.2e-25 Score=209.87 Aligned_cols=277 Identities=12% Similarity=0.131 Sum_probs=218.8
Q ss_pred cCcCceEEEEECCCCCEEEEEeC-------CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEE-e
Q 010362 211 GTKSHAECARFSPDGQFLVSCSF-------DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG-S 282 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~ 282 (512)
.....+..++|+|+|+++++++. ++.|.+||..+++....+. ....+..++|+|++++++++ .
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---------~~~~~~~~~~s~dg~~l~v~~~ 108 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH---------NDLKPFGATINNTTQTLWFGNT 108 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE---------ESSCCCSEEEETTTTEEEEEET
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe---------cCCCcceEEECCCCCEEEEEec
Confidence 34456889999999999988874 5689999999988766543 33457889999999965554 5
Q ss_pred CCCeEEEEEccCCeeeEEecccccc--------CeEEEEEecCCCEEEEEe--CCCcEEEEeCCCCceeEEeeCCcccee
Q 010362 283 QDGKIKVWRIRSGQCLRRLERAHSE--------GVTSLVFSRDGSQILSTS--FDSTARIHGLKSGKLLKEFRGHSSYVN 352 (512)
Q Consensus 283 ~dg~i~vwd~~~~~~~~~~~~~~~~--------~i~~~~~~~~~~~l~~~~--~dg~v~i~d~~~~~~~~~~~~~~~~v~ 352 (512)
.++.|.+||..+++.+..+...... .+.+++|+|+++++++++ .++.|.+||..+++.+..+..+...+.
T Consensus 109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST 188 (353)
T ss_dssp TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC
T ss_pred CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc
Confidence 5799999999999988877632222 278999999999888776 478899999999999888876666688
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEE
Q 010362 353 DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVV 431 (512)
Q Consensus 353 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~ 431 (512)
+++|+|+++++++++.++.|.+||..+++....+.... .++...+.+++++|++..++++...++.+.+||.. +...
T Consensus 189 ~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLD--DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp CCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCC--SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred eEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCC--CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 99999999999999999999999999998877765422 12345678899999986566666677999999997 4444
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECC
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~d 504 (512)
..+.... ...++|+|+|+++++++ .++.|.+||..+++.+..+..+ ..+.+++|+|++++++.+..+
T Consensus 267 ~~~~~~~-----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 267 AKVAAPE-----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEECSS-----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred EEEEcCC-----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 4444322 24689999999777666 6899999999999998887654 468899999999976666554
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=3.9e-26 Score=238.28 Aligned_cols=290 Identities=12% Similarity=0.078 Sum_probs=210.8
Q ss_pred cCceEEEEECCCCCEEEEEeC-CC-----eEEEEEcCCCeeeccccccccc-----------ee-----eccCcceeEEE
Q 010362 213 KSHAECARFSPDGQFLVSCSF-DG-----FIEVWDYLSGKLKKDLQYQADE-----------TF-----MMHDETVLCIE 270 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~-dg-----~i~iwd~~~~~~~~~~~~~~~~-----------~~-----~~h~~~v~~l~ 270 (512)
...+.+++|||||++|++++. || .|++||+.+++....+...... .. ......|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346899999999999999998 88 9999999988765433221000 00 00003488999
Q ss_pred EcCCCCeEEEEeCCCeEEEEEccCCe--eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCc
Q 010362 271 FSRDSEMLASGSQDGKIKVWRIRSGQ--CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 348 (512)
Q Consensus 271 ~s~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~ 348 (512)
|+|||++|++++. +.|++||+.++. ....+. .+...+.+++|+|||++|++++ ++.|++||+.+++.......+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~-~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLT-HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCC-CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcc-cCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 9999999999986 999999999882 334444 5678899999999999999988 5689999998887665444333
Q ss_pred cc----------------eeEEEEcCCCCEEEEEeCCC---------------------------------cEEEEeCCC
Q 010362 349 SY----------------VNDAIFTNDGSRVVTASSDC---------------------------------TVKVWDLKS 379 (512)
Q Consensus 349 ~~----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~iwd~~~ 379 (512)
.. +.++.|+|||++|++++.|+ .|.+||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 47899999999999987765 788999988
Q ss_pred -CceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc----CCCcEEEEecCCeEEEEeeCCcccC--CcEEEEEECCC
Q 010362 380 -TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN----KTSSIYIMTLQGQVVKSFSSGKREG--GDFVAACVSPK 452 (512)
Q Consensus 380 -~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~ 452 (512)
++....... ..+...+.+++| |++..+++.+. .+..|++||..+............. ..+..++|+||
T Consensus 273 ~~~~~~~~~~----~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 273 QAQTQWIDLG----KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp TCCCEEECCC----SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred CCceEEecCC----CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 765433221 135678999999 99844444433 3567999999854433332221110 02347899999
Q ss_pred CCEEEEEeCCCeEEEEEcC-CCeeEEeccccCCCeEEE-EEcCCCCeEE-EEECCC--eEEEec
Q 010362 453 GEWIYCVGEDRNLYCFSHQ-SGKLEHLMKVHEKDVIGV-THHPHRNLLA-TYGEDC--TMKLWK 511 (512)
Q Consensus 453 g~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~v-~~~p~~~~l~-s~~~dg--~i~iW~ 511 (512)
|+++++++.+|.+.+|.+. ++. ...+..|...|..+ .|+|+++.|+ +++.|+ .++||+
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 9999999999977777665 445 77787888888887 5999998775 455555 889986
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=2.2e-25 Score=209.03 Aligned_cols=277 Identities=11% Similarity=0.095 Sum_probs=199.6
Q ss_pred EEECCCCCE-EEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC-CCeEEEEEccCCe
Q 010362 219 ARFSPDGQF-LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ-DGKIKVWRIRSGQ 296 (512)
Q Consensus 219 ~~~s~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-dg~i~vwd~~~~~ 296 (512)
..|.+++++ +++++.++.|.+||..+++....+.. +...+ +++|+|+++++++++. ++.|.+||+.+++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--------~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~ 73 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL--------GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP 73 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC--------CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc--------cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 346666555 66778899999999999887654432 45556 9999999997776665 8899999999998
Q ss_pred e-eEEeccccccCeEEEEEecCCCEEEEEeCCC---cEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEE-eCCCc
Q 010362 297 C-LRRLERAHSEGVTSLVFSRDGSQILSTSFDS---TARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTA-SSDCT 371 (512)
Q Consensus 297 ~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~ 371 (512)
. ...+. .+..+..+++|+|++++++++..++ .|.+||+.+++.+..+..+. .+.+++|+|+|++++++ ..++.
T Consensus 74 ~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 74 PKVVAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp CEEEEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTT
T ss_pred eeEEecc-cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCCCc
Confidence 7 55554 4555555599999999999555553 89999999998888877544 46899999999865554 55688
Q ss_pred -EEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeE---EEEeeCCcccCCcEEE
Q 010362 372 -VKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQV---VKSFSSGKREGGDFVA 446 (512)
Q Consensus 372 -i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~---~~~~~~~~~~~~~~~~ 446 (512)
|.+|++.......... ... .........+.++|++..+++++..++.+.+||+. +.. ...+.. ...+..
T Consensus 152 ~i~~~~~~~~g~~~~~~-~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~----~~~~~~ 225 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTG-QEF-ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT----NNLPGT 225 (331)
T ss_dssp EEEEEEECTTCCEEEEE-EEE-ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC----SSCCCC
T ss_pred eEEEEEECCCCcEeecC-Ccc-ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC----CCCCce
Confidence 9999988643321111 000 01234578999999985577777789999999997 444 444443 244678
Q ss_pred EEECCCCCEEEEEe-CCCeEEEEEcCCCee--EEecccc----CC---CeEEEEEcCCCCeEEEEE-CCCeEEEecC
Q 010362 447 ACVSPKGEWIYCVG-EDRNLYCFSHQSGKL--EHLMKVH----EK---DVIGVTHHPHRNLLATYG-EDCTMKLWKP 512 (512)
Q Consensus 447 ~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~--~~~~~~h----~~---~v~~v~~~p~~~~l~s~~-~dg~i~iW~~ 512 (512)
++|+|||+++++++ .++.|.+||..+++. +..+..+ .. ....++|+|++++|++++ .++.|.+||.
T Consensus 226 ~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 226 IVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp EEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 99999999887766 578899999999887 3333222 22 235689999999876555 5679999984
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.3e-25 Score=211.56 Aligned_cols=269 Identities=13% Similarity=0.181 Sum_probs=194.0
Q ss_pred EEEEEeCCCeEEEEEcCC-CeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC-CeEEEEEcc--CCee--eEE
Q 010362 227 FLVSCSFDGFIEVWDYLS-GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD-GKIKVWRIR--SGQC--LRR 300 (512)
Q Consensus 227 ~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-g~i~vwd~~--~~~~--~~~ 300 (512)
.+++++.|+.|.+|++.. ++... + ....|...+.+++|+|++++|++++.+ +.|.+|++. +++. +..
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTL-T------QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEE-E------EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEE-e------eeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence 344447899999999853 32211 1 112367789999999999999988886 999999998 5553 333
Q ss_pred eccccccCeEEEEEecCCCEEEEEeC-CCcEEEEeCC---CCceeEEeeCCccceeEEEEcCCCCEEEEEe-CCCcEEEE
Q 010362 301 LERAHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLK---SGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVW 375 (512)
Q Consensus 301 ~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~v~i~d~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw 375 (512)
+. ....+..++|+|+++++++++. ++.|.+||+. +.+....+..+ ..+.+++|+|+++++++++ .++.|.+|
T Consensus 80 ~~--~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 80 SA--LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp EE--CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred cc--cCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEE
Confidence 43 2347899999999998877765 7889999994 33444555444 3588999999999888887 89999999
Q ss_pred eCCC-Cceee----ecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC--eE---EEEeeCCc---ccCC
Q 010362 376 DLKS-TDCLQ----TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG--QV---VKSFSSGK---REGG 442 (512)
Q Consensus 376 d~~~-~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--~~---~~~~~~~~---~~~~ 442 (512)
|+.+ ++... .... .....+..++|+|++..+++++..++.+.+|+++. .. ........ ....
T Consensus 157 d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTT-----VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 231 (343)
T ss_dssp EECTTSCEEEEEEEEEEC-----STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred EecCCCceeeeccccccc-----CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccC
Confidence 9987 54332 1111 12346778999999855666777899999999952 21 22222111 1134
Q ss_pred cEEEEEECCCCCEEEEEe-CCCeEEEEEcC--C--CeeEEeccccCCCeEEEEEcCCCCeEEEEE-CCCeEEEec
Q 010362 443 DFVAACVSPKGEWIYCVG-EDRNLYCFSHQ--S--GKLEHLMKVHEKDVIGVTHHPHRNLLATYG-EDCTMKLWK 511 (512)
Q Consensus 443 ~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~--~--~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~-~dg~i~iW~ 511 (512)
.+..++|+|+|+++++++ .++.|.+||+. + .+.+..+..+.. +.+++|+|++++|++++ .|+.|.+|+
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEE
Confidence 567899999999888555 78999999998 3 345555554444 88999999999888877 689999994
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=4e-25 Score=207.70 Aligned_cols=266 Identities=10% Similarity=0.078 Sum_probs=202.6
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCc-ceeEEEEcCCCCeEE-EEeCCCeEEEEEccCCeeeEEecc
Q 010362 226 QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE-TVLCIEFSRDSEMLA-SGSQDGKIKVWRIRSGQCLRRLER 303 (512)
Q Consensus 226 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~s~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~ 303 (512)
+++++++.++.|.+||..+++....+.. ++.. .+.+++|+|+++.++ +++.++.|.+||+.+++.+..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI-------ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC-------TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc-------CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence 4789999999999999999887654431 1211 588999999998664 555678999999999998877653
Q ss_pred cc----ccCeEEEEEecCCCEEEEEe------------CCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEe
Q 010362 304 AH----SEGVTSLVFSRDGSQILSTS------------FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 304 ~~----~~~i~~~~~~~~~~~l~~~~------------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
.+ ...+.+++|+|+|+++++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++++++
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE-
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe-
Confidence 32 22678899999999998886 579999999998888877765 4458889999999988887
Q ss_pred CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC-----------------------cEEEE
Q 010362 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS-----------------------SIYIM 424 (512)
Q Consensus 368 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~-----------------------~i~~~ 424 (512)
++.|.+||+.+++....+..... ..+ +.++|++..+++.+..++ .+.+|
T Consensus 153 -~~~i~~~d~~~~~~~~~~~~~~~----~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 224 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLVEDKPIQSW----EAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM 224 (337)
T ss_dssp -SSSEEEEETTTTEEEEEECSTTT----TTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred -CCeEEEEECCCCcEeeeeecccc----CCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEE
Confidence 68899999999887766553321 111 256777654444443333 46889
Q ss_pred ecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECC
Q 010362 425 TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED 504 (512)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~d 504 (512)
|........... ......+..++|+|+|++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|+++++++++.|
T Consensus 225 d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~ 300 (337)
T 1pby_B 225 DLETGEMAMREV-RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGAL 300 (337)
T ss_dssp ETTTCCEEEEEE-EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBS
T ss_pred eCCCCCceEeec-CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCC
Confidence 988544332222 2233457789999999999988 799999999999988877643 567899999999999989999
Q ss_pred CeEEEecC
Q 010362 505 CTMKLWKP 512 (512)
Q Consensus 505 g~i~iW~~ 512 (512)
+.|.+||+
T Consensus 301 ~~i~v~d~ 308 (337)
T 1pby_B 301 GDLAAYDA 308 (337)
T ss_dssp SEEEEEET
T ss_pred CcEEEEEC
Confidence 99999985
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=3.2e-25 Score=204.12 Aligned_cols=254 Identities=13% Similarity=0.084 Sum_probs=190.6
Q ss_pred EEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccC-CeeeEEeccccccC
Q 010362 230 SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS-GQCLRRLERAHSEG 308 (512)
Q Consensus 230 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~ 308 (512)
.++.|+.|++||+.+++... +..|...|.+++|+|++++|++++ ++.|++||+.+ ++........+...
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~---------~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV---------VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATIC 86 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE---------EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCB
T ss_pred CCCcceeEEEEeCCCCceee---------eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccccc
Confidence 34678999999998877543 234888999999999999999987 88999999998 87665554233477
Q ss_pred eEEEEEecCCCEEEEEeC--CCcEEE--EeCCCCceeEEeeCCccceeEEEEcCCCCEEE-EEeCCCcEEEEeCC--CCc
Q 010362 309 VTSLVFSRDGSQILSTSF--DSTARI--HGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV-TASSDCTVKVWDLK--STD 381 (512)
Q Consensus 309 i~~~~~~~~~~~l~~~~~--dg~v~i--~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~--~~~ 381 (512)
+.+++|+|++++|++++. ++...+ ++..+++ ...+..+. .+..++|+|+++.++ +++.++.+++|++. ++.
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 899999999999999983 344444 5555444 34444443 488899999999887 77789999999864 333
Q ss_pred eeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC--CeEEEEeeCCcccCCcEEEEEECCCCCEEEEE
Q 010362 382 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ--GQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g 459 (512)
. ..+. .+...+.++.|+|++..+++++..++.+.+|+++ +.....+... ...+..++|+|+|++|+++
T Consensus 165 ~-~~~~------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 165 E-TRLT------HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS---AYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp E-EECC------CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC---SEEEEEEEECTTSSEEEEE
T ss_pred c-eEcc------cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC---CcccCCeEECCCCCEEEEE
Confidence 2 2222 3456789999999985455555568888888875 4455444432 3467889999999999988
Q ss_pred eCC-----------CeEEEEEcCCCeeE--EeccccCCCeEEEEEcCCCCeEEEEECCC
Q 010362 460 GED-----------RNLYCFSHQSGKLE--HLMKVHEKDVIGVTHHPHRNLLATYGEDC 505 (512)
Q Consensus 460 ~~d-----------g~i~iwd~~~~~~~--~~~~~h~~~v~~v~~~p~~~~l~s~~~dg 505 (512)
+.+ +.|++||+.+++.. ..+.+|...+.+++|+|+++.|++++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 865 56999999988664 34447888999999999999988887654
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=3.7e-24 Score=201.63 Aligned_cols=294 Identities=16% Similarity=0.209 Sum_probs=199.1
Q ss_pred cccccccccCc-cccceEEEecCcCceEEEEECCCCCEEEEEeCC-CeEEEEEcC--CCeeeccccccccceeeccCcce
Q 010362 191 AMKQDVEDMYP-TTLSHTIKFGTKSHAECARFSPDGQFLVSCSFD-GFIEVWDYL--SGKLKKDLQYQADETFMMHDETV 266 (512)
Q Consensus 191 ~~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~~~h~~~v 266 (512)
.....+|+... ..........|...+.+++|+|+|++|++++.+ +.|.+|++. +++.... ..+..+ ..+
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~-~~~ 86 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA------AESALP-GSL 86 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE------EEEECS-SCC
T ss_pred CCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec------cccccC-CCC
Confidence 33445565532 222222224677889999999999999998876 999999997 4443211 112223 378
Q ss_pred eEEEEcCCCCeEEEEeC-CCeEEEEEcc---CCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCC-Cce
Q 010362 267 LCIEFSRDSEMLASGSQ-DGKIKVWRIR---SGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKS-GKL 340 (512)
Q Consensus 267 ~~l~~s~~~~~l~s~~~-dg~i~vwd~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~-~~~ 340 (512)
.+++|+|+++++++++. ++.|.+||+. +++....+. ....+.+++|+|+++++++++ .++.|.+||+.+ ++.
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 99999999998877665 8899999994 334444443 345689999999999888887 889999999987 544
Q ss_pred eE----EeeC-CccceeEEEEcCCCCEEEEEe-CCCcEEEEeCCC--Cce--eeecCCCCCCCCCCceeEEEEEcCCCCC
Q 010362 341 LK----EFRG-HSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKS--TDC--LQTFKPPPPLRGGDASVNSVHLFPKNPD 410 (512)
Q Consensus 341 ~~----~~~~-~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 410 (512)
.. .+.. ....+.+++|+|+++++++++ .++.|.+||+.. +.. ................+..++|+|++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 32 2232 344688999999999776555 789999999954 332 2222211111122346778999999865
Q ss_pred eEEEEcCCCcEEEEecC--CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEE--cCCCee--EEeccccC
Q 010362 411 HIVVCNKTSSIYIMTLQ--GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFS--HQSGKL--EHLMKVHE 483 (512)
Q Consensus 411 ~l~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd--~~~~~~--~~~~~~h~ 483 (512)
+++++..++.+.+|++. +........... ...+..++|+|+|++|++++ .++.|.+|+ ..++++ +..+.. .
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g 322 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-G 322 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-S
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecC-CCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-C
Confidence 66677789999999998 332222221111 12367899999999999888 689999995 446654 333433 2
Q ss_pred CCeEEEEEcCCC
Q 010362 484 KDVIGVTHHPHR 495 (512)
Q Consensus 484 ~~v~~v~~~p~~ 495 (512)
....+++|.|+.
T Consensus 323 ~~p~~i~~~~~~ 334 (343)
T 1ri6_A 323 QGPMWVVVNAHE 334 (343)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeeEEEEccc
Confidence 456678888754
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=6.5e-26 Score=235.96 Aligned_cols=284 Identities=13% Similarity=0.130 Sum_probs=204.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCc---ceeEEEEcCCCCeEEEEeCC-------
Q 010362 215 HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE---TVLCIEFSRDSEMLASGSQD------- 284 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~s~~~~~l~s~~~d------- 284 (512)
.+.+++|+|||+++++ +.||+|++||+.+++....+. +|.. .|.+++|||||++|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~--------~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~ 88 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIE--------GKKIESLRAIRYEISPDREYALFSYNVEPIYQHS 88 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEEC--------TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEec--------cccccccccceEEECCCCCEEEEEecCccceeec
Confidence 3667899999998776 789999999999887654332 2433 49999999999999999864
Q ss_pred --CeEEEEEccCCeeeEEec--cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccce---------
Q 010362 285 --GKIKVWRIRSGQCLRRLE--RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV--------- 351 (512)
Q Consensus 285 --g~i~vwd~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v--------- 351 (512)
+.+.+||+.+++. ..+. ..+...+..++|+|||+.|++++. +.|++||+.+++.......+...+
T Consensus 89 ~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp CCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHH
T ss_pred ceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECccccee
Confidence 7888999998876 3332 133445889999999999999985 799999999887766655544333
Q ss_pred ---------eEEEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCCceeeecCC
Q 010362 352 ---------NDAIFTNDGSRVVTASSDC----------------------------------TVKVWDLKSTDCLQTFKP 388 (512)
Q Consensus 352 ---------~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~ 388 (512)
.+++|+|||+.|++++.|+ .|++||+.+++....+..
T Consensus 167 ~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~ 246 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP 246 (723)
T ss_dssp HHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC
T ss_pred EEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC
Confidence 7899999999999887553 799999998876555554
Q ss_pred CCCCCCCCceeEEEEEcCCCCCeEEEEcC----CCcEEEEecCCeEEEEeeCCcccCCcE----EEEEECCCCCEEEEE-
Q 010362 389 PPPLRGGDASVNSVHLFPKNPDHIVVCNK----TSSIYIMTLQGQVVKSFSSGKREGGDF----VAACVSPKGEWIYCV- 459 (512)
Q Consensus 389 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~g~~l~~g- 459 (512)
+.....+...+.++.|+|++ ..+++... +..|++||+.+.......... +...+ ..++|+|||+.|+..
T Consensus 247 ~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~ 324 (723)
T 1xfd_A 247 PDDPRMREYYITMVKWATST-KVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIR 324 (723)
T ss_dssp CCCGGGSSEEEEEEEESSSS-EEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEE
T ss_pred CccCCCccceeEEEEEeCCC-eEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec-cCCEEeccCCCceEcCCCCeEEEEE
Confidence 33333346789999999998 45555432 357999999854433322111 11111 367999999977754
Q ss_pred -eCCC------eEEEEE-cCCCe--eEEeccccCCCeEE-EEEcCCCCeEEEEECC---CeEEEec
Q 010362 460 -GEDR------NLYCFS-HQSGK--LEHLMKVHEKDVIG-VTHHPHRNLLATYGED---CTMKLWK 511 (512)
Q Consensus 460 -~~dg------~i~iwd-~~~~~--~~~~~~~h~~~v~~-v~~~p~~~~l~s~~~d---g~i~iW~ 511 (512)
..++ .|++|| ..++. ....+..+...+.. ++|+|+++.|+..+.+ +.+++|+
T Consensus 325 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 325 AIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp EECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred ecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 4666 577788 34444 14455544444554 6999999998866655 7889986
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=5e-24 Score=221.02 Aligned_cols=279 Identities=14% Similarity=0.186 Sum_probs=205.4
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 293 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~ 293 (512)
..|.+++|||| +.++.+. ++.|++||+.+++.... ..+...+.+++|+|||++|+++ .|+.|++||+.
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l---------~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYL---------FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEE---------ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEc---------cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecC
Confidence 56999999999 6666664 69999999988765432 2366778999999999999995 68999999999
Q ss_pred C-----CeeeEEeccccccC--------------eEEEEEecCCCEEEEEe-----------------------------
Q 010362 294 S-----GQCLRRLERAHSEG--------------VTSLVFSRDGSQILSTS----------------------------- 325 (512)
Q Consensus 294 ~-----~~~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~----------------------------- 325 (512)
+ ++...... .+... +.+++|+|||++|++++
T Consensus 150 ~~~~~~g~~~~~~~-~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~ 228 (706)
T 2z3z_A 150 KLGEGMSRAIAVTI-DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMA 228 (706)
T ss_dssp CTTSCCCCCEESCS-CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBT
T ss_pred cccccCCCcEEecc-CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCC
Confidence 8 77654443 22232 48999999999999987
Q ss_pred ----CCCcEEEEeCCCCceeEEee--CCccceeEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCceeeecCCCCCCCC
Q 010362 326 ----FDSTARIHGLKSGKLLKEFR--GHSSYVNDAIFTNDGSRVVTASSDC-----TVKVWDLKSTDCLQTFKPPPPLRG 394 (512)
Q Consensus 326 ----~dg~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~ 394 (512)
.+..|++||+.+++...... .|...+.+++|+|||+.|++++.++ .|.+||+.+++....+..... ..
T Consensus 229 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~-~~ 307 (706)
T 2z3z_A 229 GTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD-KH 307 (706)
T ss_dssp TSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC-SS
T ss_pred CCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC-CC
Confidence 34679999998887654432 4667799999999999999887775 899999998843333221100 01
Q ss_pred CCceeEEEEEcC--CCCCeEEEEcCCCcEEEEecC--CeEEEEeeCCcccCCcEEE-EEECCCCCEEEEEeC-CC----e
Q 010362 395 GDASVNSVHLFP--KNPDHIVVCNKTSSIYIMTLQ--GQVVKSFSSGKREGGDFVA-ACVSPKGEWIYCVGE-DR----N 464 (512)
Q Consensus 395 ~~~~i~~~~~~~--~~~~~l~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~~g~~-dg----~ 464 (512)
....+.++.|+| ++ .+++++..++.+.+|.++ +.....+..+ ...+.. ++|+|+|+.|++++. ++ .
T Consensus 308 ~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~~~~~~ 383 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTTGRLIRQVTKG---EWEVTNFAGFDPKGTRLYFESTEASPLERH 383 (706)
T ss_dssp CCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEETTSCEEEECCCS---SSCEEEEEEECTTSSEEEEEESSSCTTCBE
T ss_pred eECccCCceeecCCCC-EEEEEEccCCccEEEEEECCCCEEEecCCC---CeEEEeeeEEcCCCCEEEEEecCCCCceEE
Confidence 111346788999 77 588888888888888765 5555555432 344655 799999998876664 44 7
Q ss_pred EEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECC----CeEEEecC
Q 010362 465 LYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED----CTMKLWKP 512 (512)
Q Consensus 465 i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~d----g~i~iW~~ 512 (512)
|+.||..+++. ..+. |...+.+++|+|++++++.++.+ +.|.+||+
T Consensus 384 l~~~d~~~~~~-~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 384 FYCIDIKGGKT-KDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EEEEETTCCCC-EESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EEEEEcCCCCc-eecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 88888877763 3343 66779999999999988766443 56999974
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=3.3e-24 Score=223.73 Aligned_cols=276 Identities=12% Similarity=0.089 Sum_probs=204.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCC---eeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEE
Q 010362 215 HAECARFSPDGQFLVSCSFDGFIEVWDYLSG---KLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR 291 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd 291 (512)
.|.+++|||||++|++++. +.|.+||+.++ ... .+..|...+.+++|+|||++|++++ ++.|++||
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~---------~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d 178 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR---------QLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVID 178 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC---------BCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE---------EcccCCcccccccCCCCCCEEEEEe-CCcEEEEe
Confidence 3889999999999999985 99999999887 322 2334778899999999999999987 56999999
Q ss_pred ccCCeeeEEeccccccC----------------eEEEEEecCCCEEEEEeCCC---------------------------
Q 010362 292 IRSGQCLRRLERAHSEG----------------VTSLVFSRDGSQILSTSFDS--------------------------- 328 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~----------------i~~~~~~~~~~~l~~~~~dg--------------------------- 328 (512)
+.+++...... .+... +.+++|+|||++|++++.|+
T Consensus 179 ~~~g~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 179 LASGRQMQLTA-DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp TTTTEEEECCC-CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred cCCCCEEEecc-CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 99887655443 23222 47899999999999988765
Q ss_pred ------cEEEEeCCC-CceeEEee--CCccceeEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCceeeecCCCCCCCC
Q 010362 329 ------TARIHGLKS-GKLLKEFR--GHSSYVNDAIFTNDGSRVVTASS-----DCTVKVWDLKSTDCLQTFKPPPPLRG 394 (512)
Q Consensus 329 ------~v~i~d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~ 394 (512)
.|++||+.+ ++...... .|...+.+++| |||++|++++. ++.|.+||+.+++....+..... .
T Consensus 258 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~--~ 334 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP--T 334 (741)
T ss_dssp SCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS--S
T ss_pred CCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC--C
Confidence 789999988 77654433 36778999999 99999987754 56799999999876655432210 0
Q ss_pred CCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC--CeEEEEeeCCcccCCcEEEE-EECCCCCEEEEEe-CCC--eEEEE
Q 010362 395 GDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ--GQVVKSFSSGKREGGDFVAA-CVSPKGEWIYCVG-EDR--NLYCF 468 (512)
Q Consensus 395 ~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~~g~-~dg--~i~iw 468 (512)
....+.++.|+|++. ++++++.++.+.+|.++ +. ...+..+ ...+..+ .|+|+|+.|++.+ .++ .+++|
T Consensus 335 ~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~---~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 335 WVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHG---NWSVDELLAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp CCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCS---SSCEEEEEEEETTTTEEEEEECSSCTTCBEEE
T ss_pred cCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeec---ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEE
Confidence 011345789999985 88888888876666654 55 4444432 3456666 5999999876554 455 89999
Q ss_pred EcCC-CeeEEeccccCCCeEEEEEcCCCCeEEEEECC----CeEEEec
Q 010362 469 SHQS-GKLEHLMKVHEKDVIGVTHHPHRNLLATYGED----CTMKLWK 511 (512)
Q Consensus 469 d~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~d----g~i~iW~ 511 (512)
++.. +.....+.. ...+..++|+||+++|+....+ +.+.+|+
T Consensus 410 ~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 410 AVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp EEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred EEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 9864 555566654 6678899999999988765433 3466665
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=4.3e-23 Score=193.42 Aligned_cols=294 Identities=11% Similarity=0.108 Sum_probs=203.5
Q ss_pred eeeeccCcccccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCCee-ecccccccccee
Q 010362 182 QFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSF-DGFIEVWDYLSGKL-KKDLQYQADETF 259 (512)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~-dg~i~iwd~~~~~~-~~~~~~~~~~~~ 259 (512)
....+.........+++....+....+.. +...+ +++|+|+|+++++++. ++.|.+||..+++. ... +
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~--------~ 79 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITL-GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA--------I 79 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEEC-CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE--------E
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEc-cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe--------c
Confidence 33344444455667778777777777764 45555 9999999997776665 89999999988875 332 2
Q ss_pred eccCcceeEEEEcCCCCeEEEEeCCC---eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEE-eCCCc-EEEEe
Q 010362 260 MMHDETVLCIEFSRDSEMLASGSQDG---KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDST-ARIHG 334 (512)
Q Consensus 260 ~~h~~~v~~l~~s~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~-v~i~d 334 (512)
..+..+..+++|+|++++++++..++ .|.+||+.+++.+..+. ....+.+++|+|+|++++++ ..++. |.+|+
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 80 QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 33555555599999999999655553 89999999999888775 44567999999999866555 55588 99999
Q ss_pred CCCCceeE----EeeCCccceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCce---eeecCCCCCCCCCCceeEEEEEcC
Q 010362 335 LKSGKLLK----EFRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKSTDC---LQTFKPPPPLRGGDASVNSVHLFP 406 (512)
Q Consensus 335 ~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~ 406 (512)
+.....+. ........+..++|+|+|+++++++ .++.|.+||+.+++. ...+.. ...+..++++|
T Consensus 158 ~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-------~~~~~~~~~sp 230 (331)
T 3u4y_A 158 IDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-------NNLPGTIVVSR 230 (331)
T ss_dssp ECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-------SSCCCCEEECT
T ss_pred ECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-------CCCCceEEECC
Confidence 87644331 1123345588999999999765554 688999999998887 555542 24567899999
Q ss_pred CCCCeEEEEcCCCcEEEEecCCeEE---EEeeCC----cccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEe
Q 010362 407 KNPDHIVVCNKTSSIYIMTLQGQVV---KSFSSG----KREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHL 478 (512)
Q Consensus 407 ~~~~~l~~~~~~~~i~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~ 478 (512)
++..++++...++.|.+||...... ..+... .........++|+|||++|++++ .++.|.+||+.+.....
T Consensus 231 dg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~- 309 (331)
T 3u4y_A 231 DGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGY- 309 (331)
T ss_dssp TSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEE-
T ss_pred CCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccc-
Confidence 9854566666788899999985433 222221 11111224589999999987666 56799999998755433
Q ss_pred ccccCCCeEEEEEcCCC
Q 010362 479 MKVHEKDVIGVTHHPHR 495 (512)
Q Consensus 479 ~~~h~~~v~~v~~~p~~ 495 (512)
+.+....-....++|+.
T Consensus 310 ~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 310 VAGIEANGGIAICHPDK 326 (331)
T ss_dssp CTTCCCBSCEEECCCC-
T ss_pred eecccccCCeEEECCcc
Confidence 33333332234455543
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=5.6e-24 Score=200.94 Aligned_cols=270 Identities=14% Similarity=0.125 Sum_probs=193.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEE-EEeCCCeEEEEEccCCe
Q 010362 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA-SGSQDGKIKVWRIRSGQ 296 (512)
Q Consensus 218 ~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~-s~~~dg~i~vwd~~~~~ 296 (512)
.+++++++.++++++.+++|.+||..+++....+... ....+..++|+|++++++ ++..++.|.+||+.+++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-------~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP-------DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS-------SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC-------CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 4568889999999999999999999998876554321 112578999999998665 45568999999999998
Q ss_pred eeEEecccc-----ccCeEEEEEecCCCEEEEEeCC------------CcEEEEeCCCCce---eEEeeCCccceeEEEE
Q 010362 297 CLRRLERAH-----SEGVTSLVFSRDGSQILSTSFD------------STARIHGLKSGKL---LKEFRGHSSYVNDAIF 356 (512)
Q Consensus 297 ~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~d------------g~v~i~d~~~~~~---~~~~~~~~~~v~~~~~ 356 (512)
....+...+ ...+.+++|+|+|+++++++.+ +.|.+||+.+++. +..+.. ...+.+++|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~ 155 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRA 155 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEE
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeE
Confidence 877765322 2347899999999999998865 8999999988543 334443 345889999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCC--------------CCC----ceeEEEEEcCCCCC--------
Q 010362 357 TNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR--------------GGD----ASVNSVHLFPKNPD-------- 410 (512)
Q Consensus 357 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------------~~~----~~i~~~~~~~~~~~-------- 410 (512)
+|+|+ +++++. .|.+||+.+++....+....... ... .....+.+++++..
T Consensus 156 s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 232 (349)
T 1jmx_B 156 ADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLL 232 (349)
T ss_dssp CTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEE
T ss_pred CCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccc
Confidence 99999 665543 49999999988776654321000 000 02334555543311
Q ss_pred --eEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeE
Q 010362 411 --HIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSP-KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVI 487 (512)
Q Consensus 411 --~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 487 (512)
++.....++.+..++... ....+..++++| +|++++++ ++.|++||+.+++.+..+.. ...+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~ 298 (349)
T 1jmx_B 233 YGYLSVDLKTGKTHTQEFAD-----------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYY 298 (349)
T ss_dssp EEEEEEETTTCCEEEEEEEE-----------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCC
T ss_pred eeEEEEeccCCcEEeccccc-----------CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCcc
Confidence 111233334444444321 244678999999 99999988 88999999999998877763 34577
Q ss_pred EEEEcCCCCeEEEEECCCeEEEecC
Q 010362 488 GVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 488 ~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+++|+|++++|++++.++.|.+||+
T Consensus 299 ~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 299 CVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp EEEECSSSSCEEEESBSSEEEEEET
T ss_pred ceEECCCCCEEEEecCCCeEEEEec
Confidence 9999999998888888999999985
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=8.9e-24 Score=219.82 Aligned_cols=293 Identities=14% Similarity=0.152 Sum_probs=208.6
Q ss_pred ccccccccCccccceEEEecCcC---ceEEEEECCCCCEEEEEeCC---------CeEEEEEcCCCeeecccccccccee
Q 010362 192 MKQDVEDMYPTTLSHTIKFGTKS---HAECARFSPDGQFLVSCSFD---------GFIEVWDYLSGKLKKDLQYQADETF 259 (512)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~sg~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~ 259 (512)
....+|+.........+. +|.. .|.+++|||||++|++++.+ +.|.+||+.+++.. .+. ..
T Consensus 37 g~i~~~d~~~g~~~~~~~-~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~-----~~ 109 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIE-GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-SLD-----PP 109 (723)
T ss_dssp SCEEEBCGGGCCCEEEEC-TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE-ECC-----CT
T ss_pred CCEEEEECCCCcEEEEec-cccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE-ecc-----CC
Confidence 345567766666555553 5554 49999999999999999864 78889999988752 111 11
Q ss_pred eccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccC------------------eEEEEEecCCCEE
Q 010362 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEG------------------VTSLVFSRDGSQI 321 (512)
Q Consensus 260 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~------------------i~~~~~~~~~~~l 321 (512)
.+|...+.+++|||||+.||+++. +.|++||+.+++...... .+... +.+++|+|||+.|
T Consensus 110 ~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~-~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~l 187 (723)
T 1xfd_A 110 EVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS-TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRL 187 (723)
T ss_dssp TCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC-CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEE
T ss_pred ccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec-CCCCCceECcccceeEEEEeccCcceEEECCCCCEE
Confidence 235566899999999999999985 799999999988765554 33332 3789999999999
Q ss_pred EEEeCCC----------------------------------cEEEEeCCCCceeEEeeCC------ccceeEEEEcCCCC
Q 010362 322 LSTSFDS----------------------------------TARIHGLKSGKLLKEFRGH------SSYVNDAIFTNDGS 361 (512)
Q Consensus 322 ~~~~~dg----------------------------------~v~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~ 361 (512)
++++.|+ .|++||+.+++....+..+ ...+.+++|+|||+
T Consensus 188 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 188 AYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred EEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe
Confidence 9987553 7999999888765666554 56789999999999
Q ss_pred EEEEEeC----CCcEEEEeCCCCceeeecCCCCCCCCCCcee----EEEEEcCCCCCeEEE-EcCCC------cEEEEe-
Q 010362 362 RVVTASS----DCTVKVWDLKSTDCLQTFKPPPPLRGGDASV----NSVHLFPKNPDHIVV-CNKTS------SIYIMT- 425 (512)
Q Consensus 362 ~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~l~~-~~~~~------~i~~~~- 425 (512)
++++.+. +..|.+||+.+++....+... +...+ ..+.|+|++..+++. +..++ .+++||
T Consensus 268 ~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-----~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~ 342 (723)
T 1xfd_A 268 VAVTWLNRAQNVSILTLCDATTGVCTKKHEDE-----SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSS 342 (723)
T ss_dssp EEEEEEETTSCEEEEEEEETTTCCEEEEEEEE-----CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECS
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCcceEEEEec-----cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEec
Confidence 8877653 357999999988765543211 11122 367899999666665 55666 577787
Q ss_pred cCCeE---EEEeeCCcccCCcEEE-EEECCCCCEEEEEeCC---CeEEEEEcCCCe--eEEeccc---cCCCeEEEEEcC
Q 010362 426 LQGQV---VKSFSSGKREGGDFVA-ACVSPKGEWIYCVGED---RNLYCFSHQSGK--LEHLMKV---HEKDVIGVTHHP 493 (512)
Q Consensus 426 ~~~~~---~~~~~~~~~~~~~~~~-~~~s~~g~~l~~g~~d---g~i~iwd~~~~~--~~~~~~~---h~~~v~~v~~~p 493 (512)
..+.. ...+... ...+.. ++|+|||+.|+..+.+ +.+++|++.... ....+.. |...+..++|+|
T Consensus 343 ~~~~~~~~~~~l~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sp 419 (723)
T 1xfd_A 343 QPNSSNDNIQSITSG---DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSH 419 (723)
T ss_dssp SCCSSSCCCCBSCCS---SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECT
T ss_pred cCCCCccceeEeecC---CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECC
Confidence 34433 3333321 223444 6899999999876654 789999986432 3334443 667789999999
Q ss_pred CCCeEEEE
Q 010362 494 HRNLLATY 501 (512)
Q Consensus 494 ~~~~l~s~ 501 (512)
++++++..
T Consensus 420 dg~~l~~~ 427 (723)
T 1xfd_A 420 SMDFFLLK 427 (723)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 99977754
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=6.4e-23 Score=198.51 Aligned_cols=255 Identities=10% Similarity=0.083 Sum_probs=177.4
Q ss_pred cCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeee-------ccccccccceeeccCcceeEEEEcCCCCeEE----EE
Q 010362 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLK-------KDLQYQADETFMMHDETVLCIEFSRDSEMLA----SG 281 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~-------~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~----s~ 281 (512)
...+.++++++++.++++|+.|| +++|+....... .............+...|.+++|+|++++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34588999999999999999888 899876422110 0000000111123667899999999999999 78
Q ss_pred eCCCeEEEEEccCC--------ee---eEEeccccccCeEEEEEecC-CCEEEEEeCCCcEEEEeCCCCceeEEeeCCcc
Q 010362 282 SQDGKIKVWRIRSG--------QC---LRRLERAHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEFRGHSS 349 (512)
Q Consensus 282 ~~dg~i~vwd~~~~--------~~---~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~ 349 (512)
+.|++|++||+.++ +. ...+ .+|...|.+++|+|+ +.+|++++.||+|++||++++.......+|..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLL-KDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECC-CSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeecc-CCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 88999999999765 21 2233 368999999999997 88999999999999999999877777778889
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCC-CCCceeEEEEEcCCCCCeEEEEcCCC------cEE
Q 010362 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR-GGDASVNSVHLFPKNPDHIVVCNKTS------SIY 422 (512)
Q Consensus 350 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~~~------~i~ 422 (512)
.|.+++|+|+|++|++|+.||+|++||.+ ++....+..+.... .+...+.++.|+++...+++....+| .++
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 99999999999999999999999999998 55555554333221 34568999999987633333344443 388
Q ss_pred EEecCCe------EEEEeeCC----cccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEc
Q 010362 423 IMTLQGQ------VVKSFSSG----KREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSH 470 (512)
Q Consensus 423 ~~~~~~~------~~~~~~~~----~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~ 470 (512)
+|+++.. ....+... .....+...+..-++.+++++++ ..+.|.+...
T Consensus 273 i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 273 MALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp EEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred EEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEe
Confidence 9998732 11222111 01112222333446777776666 4445666654
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.5e-22 Score=191.14 Aligned_cols=265 Identities=13% Similarity=0.130 Sum_probs=183.6
Q ss_pred CCeEEEEEcC--CCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC---CCeEEEEEccCCee--eEEeccccc
Q 010362 234 DGFIEVWDYL--SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ---DGKIKVWRIRSGQC--LRRLERAHS 306 (512)
Q Consensus 234 dg~i~iwd~~--~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~---dg~i~vwd~~~~~~--~~~~~~~~~ 306 (512)
++.|.+|+++ +++.... ....+...+..++|+|||+ |++++. ++.|.+|++.+++. +..+. .+.
T Consensus 15 ~~~i~v~~~d~~tg~~~~~-------~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~-~~~ 85 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTND-------GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV-APG 85 (347)
T ss_dssp CCEEEEEEEETTTTEEEEE-------EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE-EES
T ss_pred CCCEEEEEEcCCCCeEEEe-------eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee-cCC
Confidence 5567777765 3443221 1122557788999999999 555554 68999999987763 33332 466
Q ss_pred cCeEEEEEecCCCEEEEEe-CCCcEEEEeCCC-Cc--eeEEeeCC---------ccceeEEEEcCCCCEEEEEeCCCcEE
Q 010362 307 EGVTSLVFSRDGSQILSTS-FDSTARIHGLKS-GK--LLKEFRGH---------SSYVNDAIFTNDGSRVVTASSDCTVK 373 (512)
Q Consensus 307 ~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~dg~i~ 373 (512)
..+..++|+|+|++|++++ .++.|.+|++.. +. .+..+... ...+.+++|+|+|+.+++...++.|.
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~ 165 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVY 165 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEE
Confidence 7889999999999998888 678999999963 32 23333221 12478899999999666666788999
Q ss_pred EEeCC-CCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC--eEEE---EeeCCcc---cCCcE
Q 010362 374 VWDLK-STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG--QVVK---SFSSGKR---EGGDF 444 (512)
Q Consensus 374 iwd~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--~~~~---~~~~~~~---~~~~~ 444 (512)
+||+. +++......... .....+..++|+|++..+++++..++.+.+|+++. .... ....... ....+
T Consensus 166 ~~~~~~~g~~~~~~~~~~---~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 166 VYNVSDAGQLSEQSVLTM---EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp EEEECTTSCEEEEEEEEC---CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEE
T ss_pred EEEECCCCcEEEeeeEEc---CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcc
Confidence 99998 444322111000 11235678999999855667778899999999873 2222 2221111 11457
Q ss_pred EEEEECCCCCEEEEE-eCCCeEEEEEcCC---CeeEEeccccCCCeEEEEEcCCCCeEEEEECC-CeEEEe
Q 010362 445 VAACVSPKGEWIYCV-GEDRNLYCFSHQS---GKLEHLMKVHEKDVIGVTHHPHRNLLATYGED-CTMKLW 510 (512)
Q Consensus 445 ~~~~~s~~g~~l~~g-~~dg~i~iwd~~~---~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~d-g~i~iW 510 (512)
..++|+|||++|+++ ..++.|.+|++.. .+.+..+..+...+.+++|+|++++|++++.+ +.|.+|
T Consensus 243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp EEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 889999999988554 5689999999872 24555666666778999999999988888754 899999
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=3.6e-23 Score=223.16 Aligned_cols=297 Identities=12% Similarity=0.078 Sum_probs=223.2
Q ss_pred ccccCccccceEEEecCcCce-------EEEEECCCCCEEEEEeCC------CeEEEEEcCCCeeeccccc---------
Q 010362 196 VEDMYPTTLSHTIKFGTKSHA-------ECARFSPDGQFLVSCSFD------GFIEVWDYLSGKLKKDLQY--------- 253 (512)
Q Consensus 196 ~~~~~~~~~~~~~~~~h~~~v-------~~~~~s~~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~--------- 253 (512)
+|+..... ...+. +|...+ .+++|||||+++++++.+ ..|.+|++.+++.......
T Consensus 84 ~~d~~~g~-~~~lt-~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~sp 161 (1045)
T 1k32_A 84 FYNGENGE-IKRIT-YFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFAD 161 (1045)
T ss_dssp EEETTTTE-EEECC-CCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEET
T ss_pred EEECCCCC-eEEcc-cCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCC
Confidence 34443333 33443 677777 999999999977777754 4688888876653321100
Q ss_pred --------------------------------cccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccC-CeeeEE
Q 010362 254 --------------------------------QADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS-GQCLRR 300 (512)
Q Consensus 254 --------------------------------~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~-~~~~~~ 300 (512)
.....+.+|...+.++.|+++ .++++++.|+.+.+|.+.. +.....
T Consensus 162 G~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~ 240 (1045)
T 1k32_A 162 GRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRK 240 (1045)
T ss_dssp TEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEE
T ss_pred CEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceE
Confidence 011234568889999999988 6777788889999998764 434444
Q ss_pred eccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeC-----------CccceeEEEEc-CCCCEEEEEeC
Q 010362 301 LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG-----------HSSYVNDAIFT-NDGSRVVTASS 368 (512)
Q Consensus 301 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~ 368 (512)
+. .+. .+...+|+|||+.++++. ++.|++||+... .+..+.. |...+.+++|+ |+|+.+++++
T Consensus 241 l~-~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~- 315 (1045)
T 1k32_A 241 HT-SFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS- 315 (1045)
T ss_dssp CC-CCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-
T ss_pred ec-CCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-
Confidence 44 333 466789999999998885 899999999444 3435544 33468999999 9999998888
Q ss_pred CCcEEEEeCCCCceeeecCCCCCCCCCCc-eeEEEEEcCCCCCeEEEEcCCCcEE-EEecCCeEEEEeeCCcccCCcEEE
Q 010362 369 DCTVKVWDLKSTDCLQTFKPPPPLRGGDA-SVNSVHLFPKNPDHIVVCNKTSSIY-IMTLQGQVVKSFSSGKREGGDFVA 446 (512)
Q Consensus 369 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~ 446 (512)
++.|.+|+..++.... +. .+.. .+..+.|+ ++ ..++.++.+..++ +|+..+.....+. .+...+..
T Consensus 316 ~~~i~~~~~~~~~~~~-~~------~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~~~l~---~~~~~~~~ 383 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLK-VP------EPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKAEKFE---ENLGNVFA 383 (1045)
T ss_dssp TTEEEEECTTSSBEEE-CS------CCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCEEECC---CCCCSEEE
T ss_pred cCEEEEEcCCCCceEE-cc------CCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCceEec---CCccceee
Confidence 7899999998776443 22 2344 78899999 66 6666766688888 9999876655554 23467899
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCC----------eEEEecC
Q 010362 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC----------TMKLWKP 512 (512)
Q Consensus 447 ~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg----------~i~iW~~ 512 (512)
++|+|||++|++++.++.|++||+.+++....+.+|...+.+++|+|||++|++++.++ .|++||+
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 99999999999999999999999999998888878999999999999999999887654 8999984
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=4.4e-23 Score=208.85 Aligned_cols=267 Identities=14% Similarity=0.141 Sum_probs=194.9
Q ss_pred CcCceEEEEECCCCCEEEEEeC-CCeEEEEEcCCCeeeccccccccceeeccC-cceeEEEEcCCCCeEEEEeC---CCe
Q 010362 212 TKSHAECARFSPDGQFLVSCSF-DGFIEVWDYLSGKLKKDLQYQADETFMMHD-ETVLCIEFSRDSEMLASGSQ---DGK 286 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l~s~~~---dg~ 286 (512)
+..+|.+++|+|||++||+++. ||++.||++.+++.... ..|. ..+..++|+|| +++++++. +..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~l---------t~~~~~~~~~~~~spd-~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKL---------NREPINSVLDPHYGVG-RVILVRDVSKGAEQ 89 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEEC---------CSSCCSEECEECTTCS-EEEEEEECSTTSCC
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEee---------ecccccccccccCCCC-eEEEEeccCCCCcc
Confidence 3557999999999999999887 99999999876654332 2244 68999999999 77777765 455
Q ss_pred EEEEEccC---CeeeEEeccccccCeEEEEEecCCCE-EEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCE
Q 010362 287 IKVWRIRS---GQCLRRLERAHSEGVTSLVFSRDGSQ-ILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362 (512)
Q Consensus 287 i~vwd~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 362 (512)
..+|.+.. +... .+. ....+...+|+|+++. +++.+.++.+.+||+.+++.......+. .+++|+|||++
T Consensus 90 ~~l~~~~~~~~g~~~-~l~--~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~ 163 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLE--AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDL 163 (582)
T ss_dssp EEEEEEETTSTTCCE-ECT--TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTE
T ss_pred eEEEEEeccCCCccc-ccc--CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCE
Confidence 66665543 3322 333 2234556788998864 3344445566699998887655444332 78999999999
Q ss_pred EEEEeCC----CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC--cEEEEecCCeEEEEeeC
Q 010362 363 VVTASSD----CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS--SIYIMTLQGQVVKSFSS 436 (512)
Q Consensus 363 l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~--~i~~~~~~~~~~~~~~~ 436 (512)
+++++.+ +.|++||+.+++.. .+. .+...+.+++|+|++ ..++++..++ .|++||+.+........
T Consensus 164 la~~~~~~~~~~~i~~~d~~~g~~~-~l~------~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 235 (582)
T 3o4h_A 164 IAGLGFFGGGRVSLFTSNLSSGGLR-VFD------SGEGSFSSASISPGM-KVTAGLETAREARLVTVDPRDGSVEDLEL 235 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCCE-EEC------CSSCEEEEEEECTTS-CEEEEEECSSCEEEEEECTTTCCEEECCC
T ss_pred EEEEEEcCCCCeEEEEEcCCCCCce-Eee------cCCCccccceECCCC-CEEEEccCCCeeEEEEEcCCCCcEEEccC
Confidence 9988776 78999999887754 222 355678999999998 6666888888 89999998655553322
Q ss_pred CcccCCcEEEEE--------ECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCe--
Q 010362 437 GKREGGDFVAAC--------VSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCT-- 506 (512)
Q Consensus 437 ~~~~~~~~~~~~--------~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~-- 506 (512)
. ...+..++ |+|||.++++++.+|.+++|++ |+... .+.+.|.+++|+ +++++++++.+.+
T Consensus 236 ~---~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~ 306 (582)
T 3o4h_A 236 P---SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPP 306 (582)
T ss_dssp S---CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred C---CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCC
Confidence 1 22233334 9999999999999999999999 76655 244678899999 9999998887754
Q ss_pred -EEEec
Q 010362 507 -MKLWK 511 (512)
Q Consensus 507 -i~iW~ 511 (512)
+.+|+
T Consensus 307 ~l~~~d 312 (582)
T 3o4h_A 307 RIVSLP 312 (582)
T ss_dssp EEEEET
T ss_pred eEEEEc
Confidence 66665
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=7.2e-23 Score=212.32 Aligned_cols=282 Identities=11% Similarity=0.079 Sum_probs=196.1
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeee-ccccccc-c--------ceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 216 AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLK-KDLQYQA-D--------ETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 216 v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~-~~~~~~~-~--------~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
+..+.|. |+.+++++.|| | +||+.+++.. ..+.... . .....+...|.+++|+|| +.++.+. ++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CC
Confidence 3446777 66777777788 8 9999988762 2211100 0 000011256999999999 6666554 69
Q ss_pred eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-----CceeEEeeCCccc----------
Q 010362 286 KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS-----GKLLKEFRGHSSY---------- 350 (512)
Q Consensus 286 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~-----~~~~~~~~~~~~~---------- 350 (512)
.|++||+.+++..... .+...+.+++|+|||+.|+++ .++.|++||+.+ ++.......+...
T Consensus 102 ~i~~~d~~~~~~~~l~--~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLF--DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp EEEEEETTTTEEEEEE--CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred EEEEEECCCCceEEcc--CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 9999999988765544 356778999999999999985 589999999988 7766544433332
Q ss_pred ----eeEEEEcCCCCEEEEEe---------------------------------CCCcEEEEeCCCCceeeecCCCCCCC
Q 010362 351 ----VNDAIFTNDGSRVVTAS---------------------------------SDCTVKVWDLKSTDCLQTFKPPPPLR 393 (512)
Q Consensus 351 ----v~~~~~~~~~~~l~~~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~ 393 (512)
+.++.|+|||++|++++ .+..|.+||+.+++....... .
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~----~ 254 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG----E 254 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC----S
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC----C
Confidence 48999999999999987 446799999998875443221 1
Q ss_pred CCCceeEEEEEcCCCCCeEEEEcCCC-----cEEEEecCCe-EEEEeeCCccc--CCcEEEEEECC--CCCEEEEEeCCC
Q 010362 394 GGDASVNSVHLFPKNPDHIVVCNKTS-----SIYIMTLQGQ-VVKSFSSGKRE--GGDFVAACVSP--KGEWIYCVGEDR 463 (512)
Q Consensus 394 ~~~~~i~~~~~~~~~~~~l~~~~~~~-----~i~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~s~--~g~~l~~g~~dg 463 (512)
.+...+.++.|+|++ ..+++++.++ .+++||..+. ........... ...+..++|+| ||+++++++.+|
T Consensus 255 ~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDE-NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp CTTCEEEEEEECTTS-SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred CCceeEeeEEEECCC-CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 355689999999998 5666655554 8999999855 44443321111 11235679999 999999999999
Q ss_pred eEEEEEcC-CCeeEEeccccCCCeEE-EEEcCCCCeEEEEEC-CC----eEEEec
Q 010362 464 NLYCFSHQ-SGKLEHLMKVHEKDVIG-VTHHPHRNLLATYGE-DC----TMKLWK 511 (512)
Q Consensus 464 ~i~iwd~~-~~~~~~~~~~h~~~v~~-v~~~p~~~~l~s~~~-dg----~i~iW~ 511 (512)
.+.+|++. ++..+..+..|...+.. ++|+|+++.|+.++. ++ .|..||
T Consensus 334 ~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 334 WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 99999876 67777788888888877 899999987765554 44 555554
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=6e-23 Score=221.46 Aligned_cols=279 Identities=11% Similarity=0.085 Sum_probs=218.7
Q ss_pred eEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCC-CeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC
Q 010362 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLS-GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD 284 (512)
Q Consensus 206 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d 284 (512)
..+ .+|...+.++.|+++ .++++++.||.+.||.+.. +.... .+..|. .+...+|+|||+.|+++. +
T Consensus 197 ~~l-~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~--------~l~~~~-~~~~~~~SpDG~~la~~~-~ 264 (1045)
T 1k32_A 197 KKI-VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLR--------KHTSFT-DYYPRHLNTDGRRILFSK-G 264 (1045)
T ss_dssp EEE-ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCE--------ECCCCC-SSCEEEEEESSSCEEEEE-T
T ss_pred EEC-cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcce--------EecCCC-CcceeeEcCCCCEEEEEe-C
Confidence 344 589999999999998 6777888899999998753 22222 122233 467789999999999885 8
Q ss_pred CeEEEEEccCCeeeEEecc----------ccccCeEEEEEe-cCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCcc-cee
Q 010362 285 GKIKVWRIRSGQCLRRLER----------AHSEGVTSLVFS-RDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS-YVN 352 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~~----------~~~~~i~~~~~~-~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~-~v~ 352 (512)
+.|.+||+.... +..+.. .|...+.+++|+ |||+.+++++ ++.+++|+..+++.. .+..|.. .+.
T Consensus 265 ~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~ 341 (1045)
T 1k32_A 265 GSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYV 341 (1045)
T ss_dssp TEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEE
T ss_pred CEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEE
Confidence 999999985443 334431 134468999999 9999999888 889999999877644 4566776 899
Q ss_pred EEEEcCCCCEEEEEeCCCcEE-EEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEE
Q 010362 353 DAIFTNDGSRVVTASSDCTVK-VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 431 (512)
Q Consensus 353 ~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 431 (512)
+++|+ +|+.+++++.++.+. +||+.++.... +. .+...+..++|+|++ ..+++++.++.+++||+.+...
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~------~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~ 412 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FE------ENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKP 412 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CC------CCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ec------CCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCce
Confidence 99999 999999999888888 99988765432 22 345678999999998 7888899999999999986554
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEeCCC----------eEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEE
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDR----------NLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 501 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg----------~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 501 (512)
...... +...+..++|||||++|++++.++ .|++||+.+++ ...+..|...+.+++|+|+|++|+++
T Consensus 413 ~~~~~~--~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 413 TVIERS--REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp EEEEEC--SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred EEeccC--CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEE
Confidence 444322 345577899999999999887654 89999999988 66677788889999999999999999
Q ss_pred ECCCeEEEec
Q 010362 502 GEDCTMKLWK 511 (512)
Q Consensus 502 ~~dg~i~iW~ 511 (512)
+.++...+|+
T Consensus 490 s~~~~~~~~~ 499 (1045)
T 1k32_A 490 SYRSLDPSPD 499 (1045)
T ss_dssp ESCCCCCEEC
T ss_pred ecccCCcCcc
Confidence 9988877775
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=8.4e-23 Score=187.89 Aligned_cols=250 Identities=15% Similarity=0.177 Sum_probs=178.7
Q ss_pred cccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCC-Ceeeccccccccceeecc-CcceeEEE
Q 010362 193 KQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLS-GKLKKDLQYQADETFMMH-DETVLCIE 270 (512)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~h-~~~v~~l~ 270 (512)
...+++........ + ..|...|.+++|+|+|++|++++ ++.|.+||+.+ ++...... +| ...+.+++
T Consensus 23 ~i~~~d~~~~~~~~-~-~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~ 91 (297)
T 2ojh_A 23 SIEIFNIRTRKMRV-V-WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT--------GFATICNNDHG 91 (297)
T ss_dssp EEEEEETTTTEEEE-E-EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC--------TTCCCBCSCCE
T ss_pred eEEEEeCCCCceee-e-ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc--------ccccccccceE
Confidence 33445554444332 2 36889999999999999999987 88999999988 66543222 23 46789999
Q ss_pred EcCCCCeEEEEe--CCCeEEEEEc--cCCeeeEEeccccccCeEEEEEecCCCEEE-EEeCCCcEEEEeCCC-CceeEEe
Q 010362 271 FSRDSEMLASGS--QDGKIKVWRI--RSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLKS-GKLLKEF 344 (512)
Q Consensus 271 ~s~~~~~l~s~~--~dg~i~vwd~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~v~i~d~~~-~~~~~~~ 344 (512)
|+|++++|++++ .++...||.+ .++. ...+. ....+..++|+|+++.++ +++.++.+.+|+++. +.....+
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 999999999998 3345555554 4444 33443 334589999999999887 677889899998632 3344566
Q ss_pred eCCccceeEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC----
Q 010362 345 RGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLK-STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT---- 418 (512)
Q Consensus 345 ~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~---- 418 (512)
..+...+.+++|+|+++.++.++ .++.+++|++. .+.....+. .+...+.++.|+|++ ..+++++.+
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~s~dg-~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT------DSAYGDWFPHPSPSG-DKVVFVSYDADVF 241 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC------CCSEEEEEEEECTTS-SEEEEEEEETTCC
T ss_pred ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe------cCCcccCCeEECCCC-CEEEEEEcCCCCC
Confidence 67788899999999999888766 58999999886 344444433 345688899999998 555555543
Q ss_pred -------CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCC
Q 010362 419 -------SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDR 463 (512)
Q Consensus 419 -------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg 463 (512)
+.+++||+.+...........+...+..++|+|+|++|++++.+.
T Consensus 242 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 569999998654333332222345577899999999998887553
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=2.4e-22 Score=188.69 Aligned_cols=272 Identities=14% Similarity=0.146 Sum_probs=200.2
Q ss_pred ccccccccCccccceEEEecCcC-ceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEE
Q 010362 192 MKQDVEDMYPTTLSHTIKFGTKS-HAECARFSPDGQFLV-SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCI 269 (512)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l 269 (512)
....+++....+....+..++.. .+.+++|+|+|++++ +++.++.|.+||+.+++....+..... ..|...+.++
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~ 87 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP---EERVKSLFGA 87 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT---TEEEECTTCE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc---ccccccccce
Confidence 34455666666666666655543 488999999998765 555678999999998876654432110 0023367889
Q ss_pred EEcCCCCeEEEEe------------CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC
Q 010362 270 EFSRDSEMLASGS------------QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 270 ~~s~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 337 (512)
+|+|+|+++++++ .++.|.+||+.+++.+..+. ....+.+++|+|++++++++ ++.|.+||+.+
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--APRQITMLAWARDGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--CCSSCCCEEECTTSSCEEEE--SSSEEEEETTT
T ss_pred EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe--CCCCcceeEECCCCCEEEEe--CCeEEEEECCC
Confidence 9999999998886 57999999999998877775 35568889999999988888 68999999999
Q ss_pred CceeEEeeCCccceeEEEEcCCCCEEEEEeCCC------------------------cEEEEeCCCCceeeecCCCCCCC
Q 010362 338 GKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC------------------------TVKVWDLKSTDCLQTFKPPPPLR 393 (512)
Q Consensus 338 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------------------~i~iwd~~~~~~~~~~~~~~~~~ 393 (512)
++....+..+.. ...+.|+|++..++.++.++ .|.+||+.+++.. .+.. .
T Consensus 164 ~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~----~ 237 (337)
T 1pby_B 164 GTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREV----R 237 (337)
T ss_dssp TEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEE----E
T ss_pred CcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eeec----C
Confidence 988877765431 11337899988765544332 4689999988764 2221 1
Q ss_pred CCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q 010362 394 GGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 394 ~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~ 472 (512)
.+...+.+++++|++ ..++++ ++.|.+||+.. +....+... ..+..++|+|+|+++++++.++.|.+||+.+
T Consensus 238 ~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 238 IMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEKNASIKRVPLP----HSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp ECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTTTEEEEEEECS----SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred CCCCceeeEEECCCC-CEEEEe--CCeEEEEECCCCcCcceecCC----CceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 234567889999988 556665 79999999984 444444332 3467899999999999999999999999999
Q ss_pred CeeEEeccccC
Q 010362 473 GKLEHLMKVHE 483 (512)
Q Consensus 473 ~~~~~~~~~h~ 483 (512)
++.+..+..+.
T Consensus 311 ~~~~~~~~~~~ 321 (337)
T 1pby_B 311 LEKKGQVDLPG 321 (337)
T ss_dssp CCEEEEEECGG
T ss_pred CcEEEEEEcCC
Confidence 99888876553
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.2e-21 Score=184.88 Aligned_cols=260 Identities=13% Similarity=0.146 Sum_probs=177.6
Q ss_pred cCcCceEEEEECCCCCEEEEEeC---CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe-CCCe
Q 010362 211 GTKSHAECARFSPDGQFLVSCSF---DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-QDGK 286 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~ 286 (512)
.+...+..++|+|+|+ |++++. ++.|.+|++.+++.... ..+..+...+..++|+|+|++|++++ .++.
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~------~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~ 109 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKL------NTVVAPGTPPAYVAVDEARQLVYSANYHKGT 109 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEE------EEEEEESCCCSEEEEETTTTEEEEEETTTTE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEe------eeeecCCCCCEEEEECCCCCEEEEEeCCCCE
Confidence 5567788899999999 555543 68999999977653221 12234677899999999999988888 6799
Q ss_pred EEEEEcc-CCe--eeEEeccc--------cccCeEEEEEecCCCEEEEEeCCCcEEEEeCC-CCceeE--EeeCC-ccce
Q 010362 287 IKVWRIR-SGQ--CLRRLERA--------HSEGVTSLVFSRDGSQILSTSFDSTARIHGLK-SGKLLK--EFRGH-SSYV 351 (512)
Q Consensus 287 i~vwd~~-~~~--~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~-~~~~~~--~~~~~-~~~v 351 (512)
|.+|++. ++. .+..+... ....+.+++|+|+|+.+++...++.|.+|++. +++... .+..+ ...+
T Consensus 110 v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p 189 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGP 189 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCE
T ss_pred EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCC
Confidence 9999996 333 23333211 12348899999999966666668899999998 454332 22222 3357
Q ss_pred eEEEEcCCCCEEEE-EeCCCcEEEEeCCC--Cce--eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEec
Q 010362 352 NDAIFTNDGSRVVT-ASSDCTVKVWDLKS--TDC--LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426 (512)
Q Consensus 352 ~~~~~~~~~~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~ 426 (512)
..++|+|+|+++++ ...++.|.+|++.. ++. ...+............+..++|+|++..++++...++.|.+|++
T Consensus 190 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 190 RHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 88999999996665 45688999999874 432 12222111111122568899999998555677778999999998
Q ss_pred C-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeC-CCeEEEE--EcCCCeeEE
Q 010362 427 Q-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE-DRNLYCF--SHQSGKLEH 477 (512)
Q Consensus 427 ~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~-dg~i~iw--d~~~~~~~~ 477 (512)
. ............+...+..++|+|||++|++++. ++.|.+| |..+|++..
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 270 TADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 7 2222222222222344678999999999988875 4899999 555676553
No 153
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=4.4e-21 Score=181.36 Aligned_cols=240 Identities=8% Similarity=0.081 Sum_probs=188.7
Q ss_pred cCcceeEEEEcCCCCeEEEEeC-------CCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEE-eCCCcEEEE
Q 010362 262 HDETVLCIEFSRDSEMLASGSQ-------DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIH 333 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~-------dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~v~i~ 333 (512)
....+..++|+|+++++++++. ++.|.+||..+++.+..+. ....+..++|+|++++++++ ..++.|.+|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--NDLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--ESSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--cCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 4456889999999998888874 5689999999999888875 34557889999999966655 457899999
Q ss_pred eCCCCceeEEeeCCccc---------eeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEE
Q 010362 334 GLKSGKLLKEFRGHSSY---------VNDAIFTNDGSRVVTAS--SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSV 402 (512)
Q Consensus 334 d~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~ 402 (512)
|..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||..+++....+... ...+.++
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~ 190 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT------GKMSTGL 190 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC------CTTCCCC
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC------CCccceE
Confidence 99999988888765432 68899999999887776 4788999999999887776522 2246778
Q ss_pred EEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCc-ccCCcEEEEEECCCCCEEEEEeC-CCeEEEEEcCCCeeEEec
Q 010362 403 HLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGK-REGGDFVAACVSPKGEWIYCVGE-DRNLYCFSHQSGKLEHLM 479 (512)
Q Consensus 403 ~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~s~~g~~l~~g~~-dg~i~iwd~~~~~~~~~~ 479 (512)
.++|++ ..+++++.++.+.+||... .....+.... .....+..++++|+|+++++++. ++.|.+||..+++.+..+
T Consensus 191 ~~s~dg-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 191 ALDSEG-KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp EEETTT-TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred EECCCC-CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 899988 6777788899999999984 4444444322 23456778999999998887775 599999999999988877
Q ss_pred cccCCCeEEEEEcCCCCeEEEEE-CCCeEEEecC
Q 010362 480 KVHEKDVIGVTHHPHRNLLATYG-EDCTMKLWKP 512 (512)
Q Consensus 480 ~~h~~~v~~v~~~p~~~~l~s~~-~dg~i~iW~~ 512 (512)
..+. ..+++|+|+++.++.++ .++.|.+||+
T Consensus 270 ~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 270 AAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp ECSS--CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EcCC--CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 6543 25799999998655555 7999999985
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=1.3e-20 Score=178.74 Aligned_cols=269 Identities=13% Similarity=0.162 Sum_probs=182.8
Q ss_pred CcCceEEEEECCCCCEEEEEeCC----CeEEEEEcCC--CeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe-CC
Q 010362 212 TKSHAECARFSPDGQFLVSCSFD----GFIEVWDYLS--GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-QD 284 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~sg~~d----g~i~iwd~~~--~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~d 284 (512)
+...+..++|+|+|++|++++.+ |.|.+|+++. ++.... .....+......+++ ++++|++++ .+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~------~~~~~~~~~p~~~~~--dg~~l~~~~~~~ 119 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL------NTQKTMGADPCYLTT--NGKNIVTANYSG 119 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE------EEEECSSSCEEEEEE--CSSEEEEEETTT
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe------eEeccCCCCcEEEEE--CCCEEEEEECCC
Confidence 67778889999999999999875 7999999865 433211 112224556777888 788777776 57
Q ss_pred CeEEEEEccCCeeeEEec-------------cccccCeEEEEEecCCCEEEEEeC-CCcEEEEeCCCCce------e---
Q 010362 285 GKIKVWRIRSGQCLRRLE-------------RAHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKL------L--- 341 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~l~~~~~-dg~v~i~d~~~~~~------~--- 341 (512)
+.|.+|++.....+.... ..+...+.+++|+|+|+++++++. ++.|.+|++..... +
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec
Confidence 899999997543322211 011234588999999997766654 78999998875431 1
Q ss_pred ---EE-eeCCccceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCcee--eecCCCCCCCCCCceeEEEEEcCCCCCeEEE
Q 010362 342 ---KE-FRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKSTDCL--QTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 414 (512)
Q Consensus 342 ---~~-~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 414 (512)
.. ...+...+..++|+|+|+++++++ .++.|.+||+.++... ..+.. ...+......++|+|++..++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~---~~~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 200 GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA---DTVNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES---CSSCCCCEEEEEECTTSSEEEEE
T ss_pred ccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec---CCCCCCCcccEEECCCCCEEEEE
Confidence 11 223445678999999999887777 5899999999876432 22221 11233456899999998444455
Q ss_pred EcC-CCcEEEEecC--CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEE--EcCCCeeEEec-cccCCCeE
Q 010362 415 CNK-TSSIYIMTLQ--GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCF--SHQSGKLEHLM-KVHEKDVI 487 (512)
Q Consensus 415 ~~~-~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iw--d~~~~~~~~~~-~~h~~~v~ 487 (512)
... ++.+.+|+++ ............ +..+..++|+|||++|++++ .++.|.+| |..++++.... ..+...+.
T Consensus 277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~ 355 (361)
T 3scy_A 277 NRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPV 355 (361)
T ss_dssp ECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEE
T ss_pred CCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCe
Confidence 555 6899999985 222222211111 34467899999999998888 67899996 55577776554 23556788
Q ss_pred EEEEc
Q 010362 488 GVTHH 492 (512)
Q Consensus 488 ~v~~~ 492 (512)
||.|.
T Consensus 356 ~v~~~ 360 (361)
T 3scy_A 356 CLKFV 360 (361)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99886
No 155
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3.9e-21 Score=186.01 Aligned_cols=216 Identities=14% Similarity=0.081 Sum_probs=152.3
Q ss_pred ecCcCceEEEEECCCCCEEE----EEeCCCeEEEEEcCCCeee---ccccccccceeeccCcceeEEEEcCC-CCeEEEE
Q 010362 210 FGTKSHAECARFSPDGQFLV----SCSFDGFIEVWDYLSGKLK---KDLQYQADETFMMHDETVLCIEFSRD-SEMLASG 281 (512)
Q Consensus 210 ~~h~~~v~~~~~s~~~~~l~----sg~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~h~~~v~~l~~s~~-~~~l~s~ 281 (512)
..+...|.+++|+|+|++|| +|+.|++|+|||+.++... ..-.......+.+|...|.+++|+|+ +.+|+++
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 36778899999999999999 7889999999998765100 00000112345679999999999998 8899999
Q ss_pred eCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCC-------ccceeEE
Q 010362 282 SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH-------SSYVNDA 354 (512)
Q Consensus 282 ~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-------~~~v~~~ 354 (512)
+.||+|++||++++....... .|...|.+++|+|+|++|++|+.||.|++||++ ++....+..| ...|.++
T Consensus 169 s~Dg~v~iwD~~~~~~~~~~~-~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 169 LADGSIAVLQVTETVKVCATL-PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp ETTSCEEEEEESSSEEEEEEE-CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred ECCCeEEEEEcCCCcceeecc-CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 999999999999987665554 688999999999999999999999999999997 6666655443 2379999
Q ss_pred EEcCCCCEEEEE-eCCC------cEEEEeCCCCce-----eeecCCC-CCCCCCCceeEEEEEcCCCCCeEEEEcCCCcE
Q 010362 355 IFTNDGSRVVTA-SSDC------TVKVWDLKSTDC-----LQTFKPP-PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421 (512)
Q Consensus 355 ~~~~~~~~l~~~-~~dg------~i~iwd~~~~~~-----~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i 421 (512)
+|++++.++++. ..+| .+++|+++.... ...+... ....+...+...+...++-.-++++.+..+.|
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv 326 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEV 326 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBC
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCce
Confidence 999988776543 3443 389999986521 1121111 10112222223333335553445555555666
Q ss_pred EEEecC
Q 010362 422 YIMTLQ 427 (512)
Q Consensus 422 ~~~~~~ 427 (512)
.+....
T Consensus 327 ~vl~~~ 332 (434)
T 2oit_A 327 SILARQ 332 (434)
T ss_dssp EEEEEC
T ss_pred eEEEec
Confidence 666543
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=4.2e-21 Score=184.11 Aligned_cols=285 Identities=13% Similarity=0.072 Sum_probs=194.1
Q ss_pred cCcCceEE-----EEECCCCCEEEEEeC-CC--eEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe
Q 010362 211 GTKSHAEC-----ARFSPDGQFLVSCSF-DG--FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282 (512)
Q Consensus 211 ~h~~~v~~-----~~~s~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~ 282 (512)
.|...... .+|||||++|+.++. +| .|.+||+.+++...... ++...+..++|+|||+.|+.++
T Consensus 28 ~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~--------~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 28 PPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE--------GRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp CTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC--------SSCBCSSSCEECTTSSEEEEEE
T ss_pred CCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee--------CCCCCccceEEcCCCCEEEEEe
Confidence 44444554 789999999999887 66 48888998887654332 2445555778999999999999
Q ss_pred CCCeEEEEEccCCeeeEEeccccccCeEEEE--EecCCCEEEEEe----------------------CCCcEEEEeCCCC
Q 010362 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLV--FSRDGSQILSTS----------------------FDSTARIHGLKSG 338 (512)
Q Consensus 283 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~~----------------------~dg~v~i~d~~~~ 338 (512)
.++.|++||+.+++...... .+...+.... ++|++..++... .++.|++||+.++
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQ-VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred CCCeEEEEECCCCcceeeee-chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 99999999999998765554 3444443333 489999887432 3467999999888
Q ss_pred ceeEEeeCCccceeEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 339 KLLKEFRGHSSYVNDAIFTN-DGSRVVTASSD------CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 339 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
+... +..+...+..+.|+| +|+.|+.+..+ ..|.++|...+... .+... .....+....|+|++..+
T Consensus 179 ~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~----~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 179 ESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTH----AEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp CEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCC----CTTEEEEEEEECTTSSCE
T ss_pred ceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeC----CCCcccccceECCCCCEE
Confidence 6544 444666789999999 99988877753 36888887655432 22211 111357788999999666
Q ss_pred EEEEcCCC----cEEEEecCCeEEEEeeCCcccCCc---EEEEEECCCCCEEEEE---------eCCCeEEEEEcCCCee
Q 010362 412 IVVCNKTS----SIYIMTLQGQVVKSFSSGKREGGD---FVAACVSPKGEWIYCV---------GEDRNLYCFSHQSGKL 475 (512)
Q Consensus 412 l~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~g~~l~~g---------~~dg~i~iwd~~~~~~ 475 (512)
++++..++ .|++||+.+.....+......... ....+|+|||+.|+.. ..+..|++||+.+++.
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred EEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 55554433 399999985543333221110000 0113689999988754 4566899999998876
Q ss_pred EEeccccCC-----------CeEEEEEcCCCCeEEEEE-CCCeEEEec
Q 010362 476 EHLMKVHEK-----------DVIGVTHHPHRNLLATYG-EDCTMKLWK 511 (512)
Q Consensus 476 ~~~~~~h~~-----------~v~~v~~~p~~~~l~s~~-~dg~i~iW~ 511 (512)
. .+..|.. .+.+++|+|||+.|+.++ .+|...+|.
T Consensus 333 ~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 333 H-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp E-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred E-EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 4 3444544 578899999999877665 577777774
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=2e-22 Score=209.45 Aligned_cols=279 Identities=11% Similarity=0.106 Sum_probs=193.7
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCc---ceeEEEEcCCCCeEEEEeC---------CC
Q 010362 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDE---TVLCIEFSRDSEMLASGSQ---------DG 285 (512)
Q Consensus 218 ~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~s~~~~~l~s~~~---------dg 285 (512)
+++|+|+|++++++ .||+|++||+.+++....+. +|.. .+.+++|||||++|++++. ++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~--------~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~ 90 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILS--------NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTA 90 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEEC--------HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEc--------cccccccceeeEEECCCCCeEEEEecCceeEEeecce
Confidence 67999999765554 69999999999887654332 1322 4899999999999999876 78
Q ss_pred eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEe-eCCccce-------------
Q 010362 286 KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF-RGHSSYV------------- 351 (512)
Q Consensus 286 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~-~~~~~~v------------- 351 (512)
.|++||+.+++.+.... ....+..++|+|||+.|+++. ++.|++||+.+++..... .++...+
T Consensus 91 ~i~~~d~~~g~~~~~~~--l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 91 TYYIYDLSNGEFVRGNE--LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp EEEEEETTTTEECCSSC--CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHT
T ss_pred EEEEEECCCCcccccee--cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeec
Confidence 99999999988632111 235688999999999999986 789999999888765432 2222212
Q ss_pred ----eEEEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCCcee--eecCCCCC
Q 010362 352 ----NDAIFTNDGSRVVTASSDC----------------------------------TVKVWDLKSTDCL--QTFKPPPP 391 (512)
Q Consensus 352 ----~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~--~~~~~~~~ 391 (512)
.+++|+|||++|++++.|. .|++||+.+++.. ..+..+..
T Consensus 168 ~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 247 (719)
T 1z68_A 168 LATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAM 247 (719)
T ss_dssp TCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHH
T ss_pred ccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCcc
Confidence 5899999999999987652 7889999887643 12222122
Q ss_pred CCCCCceeEEEEEcCCCCCeEEEEcCC----CcEEEEe----cCCeEEEEeeC--CcccCCcEE-----EEEECCCCCEE
Q 010362 392 LRGGDASVNSVHLFPKNPDHIVVCNKT----SSIYIMT----LQGQVVKSFSS--GKREGGDFV-----AACVSPKGEWI 456 (512)
Q Consensus 392 ~~~~~~~i~~~~~~~~~~~~l~~~~~~----~~i~~~~----~~~~~~~~~~~--~~~~~~~~~-----~~~~s~~g~~l 456 (512)
+.++...+.+++|+|++ .++++.... ..|++|| ..+........ ...+...+. .+.|+|||+.+
T Consensus 248 ~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 326 (719)
T 1z68_A 248 IASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISY 326 (719)
T ss_dssp HHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCE
T ss_pred CCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeE
Confidence 23567789999999995 566654322 2488899 66443332221 011122233 67899999966
Q ss_pred EE--EeCCC--eEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECC-----CeEEEec
Q 010362 457 YC--VGEDR--NLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGED-----CTMKLWK 511 (512)
Q Consensus 457 ~~--g~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~d-----g~i~iW~ 511 (512)
+. +..+| .|++||+.+++ ...+..+...+..+.++ +++.++..+.+ +.+++|+
T Consensus 327 ~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 327 YKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp EEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred EEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 54 44555 57888887776 34555566678887777 77777766654 7888885
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=2.5e-20 Score=176.82 Aligned_cols=271 Identities=9% Similarity=0.125 Sum_probs=184.4
Q ss_pred CCCEEEEEe----CCCeEEEEEcC--CCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC----CeEEEEEcc
Q 010362 224 DGQFLVSCS----FDGFIEVWDYL--SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD----GKIKVWRIR 293 (512)
Q Consensus 224 ~~~~l~sg~----~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d----g~i~vwd~~ 293 (512)
...++++|+ .++.|.+|+++ +++..... .. +...+..++|+|||++|++++.+ +.|.+|++.
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~------~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~ 83 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLS------DA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFD 83 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEE------EE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEee------cc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEe
Confidence 334556664 45789999774 44432211 11 56778889999999999999876 799999987
Q ss_pred C--Cee--eEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeEEe------eC--------CccceeEE
Q 010362 294 S--GQC--LRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLKEF------RG--------HSSYVNDA 354 (512)
Q Consensus 294 ~--~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~------~~--------~~~~v~~~ 354 (512)
. ++. +.... .+......+++ +++++++++ .++.|.+|++.....+..+ .+ +...+.++
T Consensus 84 ~~~g~~~~~~~~~-~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 160 (361)
T 3scy_A 84 KEKGTLHLLNTQK-TMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCV 160 (361)
T ss_dssp TTTTEEEEEEEEE-CSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEE
T ss_pred CCCCcEEEeeEec-cCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEE
Confidence 6 443 22222 24456777777 788887776 5789999999754332211 11 12235789
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEeCCCCce------e------eecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcE
Q 010362 355 IFTNDGSRVVTAS-SDCTVKVWDLKSTDC------L------QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421 (512)
Q Consensus 355 ~~~~~~~~l~~~~-~dg~i~iwd~~~~~~------~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i 421 (512)
+|+|+|+++++++ .++.|.+|++..... + ..... .....+..++|+|++..+++++..++.|
T Consensus 161 ~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 161 RITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-----APGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-----CTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec-----CCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 9999999776655 478999998875431 1 11111 1234567899999985455555579999
Q ss_pred EEEecCCeEE---EEeeCCcccCCcEEEEEECCCCCEEEEEeCC--CeEEEEEcC--CCe--eEEeccccCCCeEEEEEc
Q 010362 422 YIMTLQGQVV---KSFSSGKREGGDFVAACVSPKGEWIYCVGED--RNLYCFSHQ--SGK--LEHLMKVHEKDVIGVTHH 492 (512)
Q Consensus 422 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d--g~i~iwd~~--~~~--~~~~~~~h~~~v~~v~~~ 492 (512)
.+|++..... ........+......++|+|||++|++++.+ +.|.+|++. +++ .+..+.. ...+.+++|+
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~s 314 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIIT 314 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEEC
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEEC
Confidence 9999974433 2233333333456799999999999877754 899999985 455 3444443 4578899999
Q ss_pred CCCCeEEEEE-CCCeEEEec
Q 010362 493 PHRNLLATYG-EDCTMKLWK 511 (512)
Q Consensus 493 p~~~~l~s~~-~dg~i~iW~ 511 (512)
|++++|++++ .++.|.+|+
T Consensus 315 pdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 315 PNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp TTSCEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEE
Confidence 9999888887 678999963
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.2e-21 Score=203.50 Aligned_cols=303 Identities=10% Similarity=0.036 Sum_probs=202.1
Q ss_pred ccccccccCccccceEEEecCcC---ceEEEEECCCCCEEEEEeC---------CCeEEEEEcCCCeeecccccccccee
Q 010362 192 MKQDVEDMYPTTLSHTIKFGTKS---HAECARFSPDGQFLVSCSF---------DGFIEVWDYLSGKLKKDLQYQADETF 259 (512)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~sg~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~ 259 (512)
....+|+.........+. +|.. .+.+++|||||++||+++. ++.|++||+.+++......
T Consensus 36 ~~i~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~------- 107 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILS-NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE------- 107 (719)
T ss_dssp SCEEEEESSSCCEEEEEC-HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-------
T ss_pred CCEEEEEcCCCcEEEEEc-cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-------
Confidence 344556665555444432 4433 3899999999999999876 7899999999987632111
Q ss_pred eccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCe-----------------EEEEEecCCCEEE
Q 010362 260 MMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGV-----------------TSLVFSRDGSQIL 322 (512)
Q Consensus 260 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~~~l~ 322 (512)
....+.+++|||||+.||++. ++.|++||+.+++.......++...+ .+++|+|||++|+
T Consensus 108 --l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la 184 (719)
T 1z68_A 108 --LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLA 184 (719)
T ss_dssp --CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEE
T ss_pred --cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEE
Confidence 124688999999999999986 78999999998876543322333222 4899999999999
Q ss_pred EEeCCC----------------------------------cEEEEeCCCCcee--------EEeeCCccceeEEEEcCCC
Q 010362 323 STSFDS----------------------------------TARIHGLKSGKLL--------KEFRGHSSYVNDAIFTNDG 360 (512)
Q Consensus 323 ~~~~dg----------------------------------~v~i~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~ 360 (512)
+++.|. .|++||+.+++.. ..+.+|...+.+++|+||+
T Consensus 185 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~ 264 (719)
T 1z68_A 185 YAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE 264 (719)
T ss_dssp EEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS
T ss_pred EEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC
Confidence 987652 7889999887643 1234577789999999998
Q ss_pred CEEEEEeCC----CcEEEEe----CCCCceeeecCCCCCCCCCCceeE-----EEEEcCCCCCeEE-EEcCCC--cEEEE
Q 010362 361 SRVVTASSD----CTVKVWD----LKSTDCLQTFKPPPPLRGGDASVN-----SVHLFPKNPDHIV-VCNKTS--SIYIM 424 (512)
Q Consensus 361 ~~l~~~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~~~~~~~~l~-~~~~~~--~i~~~ 424 (512)
+.+++.... ..|.+|| ..+++....+... ...+...+. .+.|+|++..+++ ++..++ .|++|
T Consensus 265 ~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~ 342 (719)
T 1z68_A 265 RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHI--EESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYI 342 (719)
T ss_dssp EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEE--EECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEE
T ss_pred eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecc--cccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEE
Confidence 776664432 2488899 7776654433100 001233343 6789999866555 344555 46777
Q ss_pred ecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCC--Cee-EEecc----ccCCCeEEEEEc
Q 010362 425 TLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQS--GKL-EHLMK----VHEKDVIGVTHH 492 (512)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~--~~~-~~~~~----~h~~~v~~v~~~ 492 (512)
++.+.....+... ...+..+.++ +++.|+..+.+ +...+|.+.. +.. ...+. +|...+..+.|+
T Consensus 343 ~~~~~~~~~lt~~---~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s 418 (719)
T 1z68_A 343 KDTVENAIQITSG---KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFS 418 (719)
T ss_dssp SSCSTTCEECSCS---SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEEC
T ss_pred ECCCCceEecccC---ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEEC
Confidence 7765544444332 3346666666 88877777654 7788887653 421 22332 366678899999
Q ss_pred CCCCeEEE-EECC--CeEEEec
Q 010362 493 PHRNLLAT-YGED--CTMKLWK 511 (512)
Q Consensus 493 p~~~~l~s-~~~d--g~i~iW~ 511 (512)
|++++++. ++.+ ..+.+||
T Consensus 419 ~dg~~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 419 DYAKYYALVCYGPGIPISTLHD 440 (719)
T ss_dssp GGGSSEEEEECCBSSCEEEEEC
T ss_pred CCCCEEEEEcCCCCCCeEEEEE
Confidence 99887764 4433 3566775
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=3.1e-20 Score=176.26 Aligned_cols=275 Identities=11% Similarity=0.161 Sum_probs=184.9
Q ss_pred EEEEEeCC--CeEEEEEc--CCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc-CCeeeEEe
Q 010362 227 FLVSCSFD--GFIEVWDY--LSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR-SGQCLRRL 301 (512)
Q Consensus 227 ~l~sg~~d--g~i~iwd~--~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~ 301 (512)
++++|+.. +.|.+|++ .+++....-.. .......+..++|+|+|++|++++.+ .|.+|++. +++.....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~-----~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~ 77 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRT-----EIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA 77 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEE-----ECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEE-----ccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee
Confidence 35566643 56887765 34543211000 00133468899999999999999888 99999997 78765433
Q ss_pred ccccccCeEEEEEecCCCE--EEEEe-------------CCCcEEEEeCC-CCceeEEee----CCccceeEEEEcCCCC
Q 010362 302 ERAHSEGVTSLVFSRDGSQ--ILSTS-------------FDSTARIHGLK-SGKLLKEFR----GHSSYVNDAIFTNDGS 361 (512)
Q Consensus 302 ~~~~~~~i~~~~~~~~~~~--l~~~~-------------~dg~v~i~d~~-~~~~~~~~~----~~~~~v~~~~~~~~~~ 361 (512)
.....+.+.+++|+|+|++ +++++ .+|.+.+|++. +++....+. .+...+.+++|+|+|+
T Consensus 78 ~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 78 SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred EeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 2111133566899999995 44543 68899999997 466544443 2456789999999999
Q ss_pred EEEEEeC-CCcEEEEeCC-CCceee--ecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC---CeEE---
Q 010362 362 RVVTASS-DCTVKVWDLK-STDCLQ--TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ---GQVV--- 431 (512)
Q Consensus 362 ~l~~~~~-dg~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~---~~~~--- 431 (512)
++++++. ++.|++||+. +++... .+..+ .+...+..++|+|++..++++...++.+.+|+++ +...
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~----~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 233 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAP----DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTH 233 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECS----STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecC----CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEcc
Confidence 8887764 6799999998 665432 22110 1234688999999985444555567899999875 3322
Q ss_pred EEeeCCcc----cCC------cEEEEE-ECCCCCEEEEEeCC-C-----eEEEEEcC-CCeeEEe---ccccCCCeEEEE
Q 010362 432 KSFSSGKR----EGG------DFVAAC-VSPKGEWIYCVGED-R-----NLYCFSHQ-SGKLEHL---MKVHEKDVIGVT 490 (512)
Q Consensus 432 ~~~~~~~~----~~~------~~~~~~-~s~~g~~l~~g~~d-g-----~i~iwd~~-~~~~~~~---~~~h~~~v~~v~ 490 (512)
..+..... +.. .+..++ |+|||++|++++.+ + .|.+|++. ++++... ...+...+..++
T Consensus 234 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a 313 (365)
T 1jof_A 234 HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNA 313 (365)
T ss_dssp EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCC
T ss_pred ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccce
Confidence 12222111 111 477899 99999999877643 2 89999996 6765542 333455677899
Q ss_pred EcC---CCCeEEEEECC-CeEEEec
Q 010362 491 HHP---HRNLLATYGED-CTMKLWK 511 (512)
Q Consensus 491 ~~p---~~~~l~s~~~d-g~i~iW~ 511 (512)
|+| ++++|++++.+ +.|.+|+
T Consensus 314 ~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 314 VSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp EEECTTCTTEEEEECSSSCEEEEEE
T ss_pred ecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 999 89999988864 8999996
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.3e-20 Score=190.74 Aligned_cols=233 Identities=15% Similarity=0.163 Sum_probs=172.2
Q ss_pred cCcceeEEEEcCCCCeEEEEeC-CCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeC---CCcEEEEeCCC
Q 010362 262 HDETVLCIEFSRDSEMLASGSQ-DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF---DSTARIHGLKS 337 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~v~i~d~~~ 337 (512)
+..+|.+++|+|||+.||+++. ||+++||++.+++.. .+...+...+.+++|+|| +.+++++. +....+|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 4568999999999999999887 999999999776654 444233368999999999 77777765 44455654432
Q ss_pred ---CceeEEeeCCccceeEEEEcCCCCE-EEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEE
Q 010362 338 ---GKLLKEFRGHSSYVNDAIFTNDGSR-VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 413 (512)
Q Consensus 338 ---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 413 (512)
+... .+.... .+...+|+|+|+. +++.+.++.+.+||+.+++....... .. .+++|+|++ ..++
T Consensus 98 ~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~-------~~--~~~~~spDG-~~la 165 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL-------PG--FGFVSDIRG-DLIA 165 (582)
T ss_dssp TSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE-------SS--CEEEEEEET-TEEE
T ss_pred cCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC-------CC--ceEEECCCC-CEEE
Confidence 2222 333322 2446688888763 33444445566999988865443321 11 788999998 6677
Q ss_pred EEcCC----CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCC--eEEEEEcCCCeeEEeccccCCCeE
Q 010362 414 VCNKT----SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDR--NLYCFSHQSGKLEHLMKVHEKDVI 487 (512)
Q Consensus 414 ~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg--~i~iwd~~~~~~~~~~~~h~~~v~ 487 (512)
.++.+ ..|++||+.+.....+.. +...+...+|||||++|+++..+| .|++||+.+++.. .+..|...+.
T Consensus 166 ~~~~~~~~~~~i~~~d~~~g~~~~l~~---~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~ 241 (582)
T 3o4h_A 166 GLGFFGGGRVSLFTSNLSSGGLRVFDS---GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFS 241 (582)
T ss_dssp EEEEEETTEEEEEEEETTTCCCEEECC---SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHH
T ss_pred EEEEcCCCCeEEEEEcCCCCCceEeec---CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChh
Confidence 66655 679999988665555543 245578999999999999888888 8999999999888 7777877777
Q ss_pred EEE--------EcCCCCeEEEEECCCeEEEecC
Q 010362 488 GVT--------HHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 488 ~v~--------~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.++ |+|||.++++++.||++++|+.
T Consensus 242 ~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 242 SYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp HHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 777 9999999999999999999973
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=2e-19 Score=170.73 Aligned_cols=254 Identities=11% Similarity=0.140 Sum_probs=171.7
Q ss_pred CcCceEEEEECCCCCEEEEEeCCCeEEEEEcC-CCeeeccccccccceeeccCcceeEEEEcCCCCe--EEEEe------
Q 010362 212 TKSHAECARFSPDGQFLVSCSFDGFIEVWDYL-SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEM--LASGS------ 282 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~--l~s~~------ 282 (512)
....+..++|+|+|++|++++.+ .|.+|++. +++....... ..+ +.+.+++|+|+|++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~------~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~ 109 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH------PIG-GHPRANDADTNTRAIFLLAAKQPPYAV 109 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE------ECC-SSGGGGCTTSCCEEEEEEECSSTTCCE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe------ecC-CCCccEEECCCCCEEEEEEecCCccee
Confidence 44568889999999999999887 99999997 6665332110 111 23556899999994 55553
Q ss_pred -------CCCeEEEEEcc-CCeeeEEecc---ccccCeEEEEEecCCCEEEEEeC-CCcEEEEeCC-CCcee--EEee--
Q 010362 283 -------QDGKIKVWRIR-SGQCLRRLER---AHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLK-SGKLL--KEFR-- 345 (512)
Q Consensus 283 -------~dg~i~vwd~~-~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~-dg~v~i~d~~-~~~~~--~~~~-- 345 (512)
.+|++.+|++. +++....+.. .+...+.+++|+|||+++++++. ++.|++||+. +++.. ..+.
T Consensus 110 ~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 110 YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred ccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence 68999999997 4655433321 24567999999999998887764 6799999998 67653 2333
Q ss_pred CCccceeEEEEcCCCCEEEEEeC-CCcEEEEeCC--CCcee---eecCC-CCCCCCCCc------eeEEEE-EcCCCCCe
Q 010362 346 GHSSYVNDAIFTNDGSRVVTASS-DCTVKVWDLK--STDCL---QTFKP-PPPLRGGDA------SVNSVH-LFPKNPDH 411 (512)
Q Consensus 346 ~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~---~~~~~-~~~~~~~~~------~i~~~~-~~~~~~~~ 411 (512)
.|...+..++|+|+|+++++++. ++.|.+|++. +++.. ..+.. +....++.. .+..++ ++|++ +.
T Consensus 190 ~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~ 268 (365)
T 1jof_A 190 DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KY 268 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SE
T ss_pred CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CE
Confidence 23566899999999999888775 6899999765 45432 11211 111112222 588999 99998 45
Q ss_pred EEEEcC-CC-----cEEEEecC-CeEEEEeeC-CcccCCcEEEEEECC---CCCEEEEEeC-CCeEEEEEcCCCe
Q 010362 412 IVVCNK-TS-----SIYIMTLQ-GQVVKSFSS-GKREGGDFVAACVSP---KGEWIYCVGE-DRNLYCFSHQSGK 474 (512)
Q Consensus 412 l~~~~~-~~-----~i~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~s~---~g~~l~~g~~-dg~i~iwd~~~~~ 474 (512)
+++++. .. .|.+|++. ......... ..........++++| ||++|++++. ++.|.+|++....
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred EEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 555443 33 89999985 232322110 111122234678899 8999999986 4899999987663
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=6.9e-20 Score=190.39 Aligned_cols=277 Identities=13% Similarity=0.123 Sum_probs=181.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC---------C
Q 010362 215 HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD---------G 285 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d---------g 285 (512)
...+++|+|||++++++ ||+|++||+.+++....+.... +..+......++|||||++|++++.+ +
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENST---FDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTT---TTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechh---hhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 45679999999999886 9999999999987654332211 11122233558999999999999876 5
Q ss_pred eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEE-eeCCccc--------------
Q 010362 286 KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE-FRGHSSY-------------- 350 (512)
Q Consensus 286 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~-------------- 350 (512)
.+.+||+.+++... +. .+...+...+|||||+.|+.+. ++.|++||+.+++.... ..++...
T Consensus 93 ~~~~~d~~~~~~~~-l~-~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 93 SYDIYDLNKRQLIT-EE-RIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEETTTTEECC-SS-CCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred EEEEEECCCCcEEE-cc-cCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 67799999998654 43 5677899999999999999885 78999999988765432 2222221
Q ss_pred ---eeEEEEcCCCCEEEEEeCCC------------------------------------cEEEEeCCC---Cc--eeeec
Q 010362 351 ---VNDAIFTNDGSRVVTASSDC------------------------------------TVKVWDLKS---TD--CLQTF 386 (512)
Q Consensus 351 ---v~~~~~~~~~~~l~~~~~dg------------------------------------~i~iwd~~~---~~--~~~~~ 386 (512)
...+.|+|||+.|+.++.|. .|++||+.+ +. ....+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 23589999999998875322 477888887 63 12223
Q ss_pred CCCCCCCCCCceeEEEEEcCCCCCeEEEE-cC---CCcEEEEecCCeE----EEEeeCC--cccCCc-----EEEEEECC
Q 010362 387 KPPPPLRGGDASVNSVHLFPKNPDHIVVC-NK---TSSIYIMTLQGQV----VKSFSSG--KREGGD-----FVAACVSP 451 (512)
Q Consensus 387 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~---~~~i~~~~~~~~~----~~~~~~~--~~~~~~-----~~~~~~s~ 451 (512)
..+....++...+..+.|+|++. .++.. .. +..|++||..+.. ....... ..+... .....|+|
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp 328 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL 328 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred cCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence 22211123667899999999984 44443 22 2368999987432 1100000 011111 23578999
Q ss_pred CCCEEE-EEe-CC--CeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEE
Q 010362 452 KGEWIY-CVG-ED--RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 502 (512)
Q Consensus 452 ~g~~l~-~g~-~d--g~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~ 502 (512)
||+.++ ..+ .+ ..|++||..+++......+ ...|..+.+ ++++.|+..+
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g-~~~v~~~~~-~d~~~i~f~~ 381 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG-TWEVIGIEA-LTSDYLYYIS 381 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS-SSCEEEEEE-ECSSEEEEEE
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceEecccC-CEEEEEEEE-EeCCEEEEEE
Confidence 999877 665 33 4688999887776654443 455655542 3455444333
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=1.1e-18 Score=164.66 Aligned_cols=266 Identities=13% Similarity=0.088 Sum_probs=182.2
Q ss_pred CcccccccccccCccccceEEEecCcCceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeeeccccccccceeeccCcce
Q 010362 188 GTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLV-SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETV 266 (512)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v 266 (512)
........+++....+....+..+....+..++|+|+|++++ ++..++.|.+||+.+++....+...... ..+...+
T Consensus 17 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~--~~~~~~~ 94 (349)
T 1jmx_B 17 TNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP--GEVGRSM 94 (349)
T ss_dssp EETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST--TEEEECS
T ss_pred eCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc--ccccccc
Confidence 333455667777777777777655434688999999998665 4557899999999988766544321000 0002347
Q ss_pred eEEEEcCCCCeEEEEeCC------------CeEEEEEccCCeee---EEeccccccCeEEEEEecCCCEEEEEeCCCcEE
Q 010362 267 LCIEFSRDSEMLASGSQD------------GKIKVWRIRSGQCL---RRLERAHSEGVTSLVFSRDGSQILSTSFDSTAR 331 (512)
Q Consensus 267 ~~l~~s~~~~~l~s~~~d------------g~i~vwd~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 331 (512)
.+++|+|+|+++++++.+ +.|.+||+.+++.. ..+. +...+.+++|+|+|+ +++++ +.|.
T Consensus 95 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~-l~~~~--~~i~ 169 (349)
T 1jmx_B 95 YSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGS-LYVAG--PDIY 169 (349)
T ss_dssp SCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSC-EEEES--SSEE
T ss_pred cceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCCc-EEEcc--CcEE
Confidence 899999999999998865 89999999985432 3332 345688999999999 66654 4499
Q ss_pred EEeCCCCceeEEeeCCcc------------------------ceeEEEEcCCCCE-----------EEEEeCCCcEEEEe
Q 010362 332 IHGLKSGKLLKEFRGHSS------------------------YVNDAIFTNDGSR-----------VVTASSDCTVKVWD 376 (512)
Q Consensus 332 i~d~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~~-----------l~~~~~dg~i~iwd 376 (512)
+||+.+++....+..+.. ....+++++++.. +.....++.+++|+
T Consensus 170 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (349)
T 1jmx_B 170 KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 249 (349)
T ss_dssp EECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEE
T ss_pred EEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecc
Confidence 999999988877654320 2344566654321 11222334455444
Q ss_pred CCCCceeeecCCCCCCCCCCceeEEEEEcC-CCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCcccCCcEEEEEECCCCC
Q 010362 377 LKSTDCLQTFKPPPPLRGGDASVNSVHLFP-KNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGE 454 (512)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~ 454 (512)
+.. ....+.+++++| ++ ..++++ ++.|.+||+.. +....+... ..+..++|+|+|+
T Consensus 250 ~~~---------------~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 250 FAD---------------LTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKLIKAANLD----HTYYCVAFDKKGD 307 (349)
T ss_dssp EEE---------------CSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTEEEEEEECS----SCCCEEEECSSSS
T ss_pred ccc---------------CCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCeEEEEEcCC----CCccceEECCCCC
Confidence 421 234678899999 77 566666 88999999984 444444332 2356899999999
Q ss_pred EEEEEeCCCeEEEEEcCCCeeEEecccc
Q 010362 455 WIYCVGEDRNLYCFSHQSGKLEHLMKVH 482 (512)
Q Consensus 455 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h 482 (512)
+|++++.++.|.+||..+++.+..+..+
T Consensus 308 ~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp CEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEEecCCCeEEEEeccccceeeeeecC
Confidence 9999888999999999999988877654
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=8.3e-19 Score=163.78 Aligned_cols=247 Identities=13% Similarity=0.097 Sum_probs=189.9
Q ss_pred CcceeEEEEcCCCCeEEEEeCC------------------------CeEEEEEccCCeeeEEeccccccCeEEEEEecCC
Q 010362 263 DETVLCIEFSRDSEMLASGSQD------------------------GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG 318 (512)
Q Consensus 263 ~~~v~~l~~s~~~~~l~s~~~d------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~ 318 (512)
-..+.+++++|+|+++++.+.+ ++|.+||..+++.+..+...+-..+..++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3679999999999998888777 4799999999998776654455678999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCc-eeEEe---------eCCccceeEEEEcC-CCCEEEEEe-CCCcEEEEeCCCCceeeec
Q 010362 319 SQILSTSFDSTARIHGLKSGK-LLKEF---------RGHSSYVNDAIFTN-DGSRVVTAS-SDCTVKVWDLKSTDCLQTF 386 (512)
Q Consensus 319 ~~l~~~~~dg~v~i~d~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~~ 386 (512)
+.+++...++.|+.||..... .+..+ ..+...+..++++| ++..+++.+ .++.|++|| .++.....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888888999999985442 45555 23444688999999 788888876 689999999 556666555
Q ss_pred CCCCCC----CCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEE---
Q 010362 387 KPPPPL----RGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYC--- 458 (512)
Q Consensus 387 ~~~~~~----~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~--- 458 (512)
...... .+.......++++|++..++++...++.|.+|+.. +..+..+... .....+..++++| |..+.+
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA-SFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-TTTTCEEEEEEET-TEEEEEECC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-ccCCCcceeeecC-CEEEEeCCC
Confidence 322110 12234578999999866888888899999999998 7776666443 2345677899999 433333
Q ss_pred ----EeCCCeEEEEEcCCCeeEEecc---ccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 459 ----VGEDRNLYCFSHQSGKLEHLMK---VHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 459 ----g~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
...+..|++||..+++.+..+. ++...+.+|+++|+|.++++...+++|++|++
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 3345589999999999988873 56678999999999998899999999999974
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=4.5e-19 Score=167.47 Aligned_cols=272 Identities=11% Similarity=0.149 Sum_probs=187.5
Q ss_pred CCCEEEEEe------CCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC----------CCeE
Q 010362 224 DGQFLVSCS------FDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ----------DGKI 287 (512)
Q Consensus 224 ~~~~l~sg~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----------dg~i 287 (512)
+++++++.. .|+.|.+||..+++....+. .+..+ .++|+||++++++++. +++|
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~--------~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v 83 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVP--------TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVV 83 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEE--------CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEec--------CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEE
Confidence 455555543 47899999998887765433 24344 8999999999998863 6789
Q ss_pred EEEEccCCeeeEEeccc-----cccCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeEE-eeCCccceeEEEEcCC
Q 010362 288 KVWRIRSGQCLRRLERA-----HSEGVTSLVFSRDGSQILSTSF--DSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTND 359 (512)
Q Consensus 288 ~vwd~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~ 359 (512)
.+||..+++.+..+... +......++++|||++++++.. ++.|.+||+.+++.+.. +... . ...+.+.|+
T Consensus 84 ~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~ 161 (361)
T 2oiz_A 84 EVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-G-CWSVIPQPN 161 (361)
T ss_dssp EEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-T-EEEEEECTT
T ss_pred EEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-C-cceeEEcCC
Confidence 99999999888877522 2345778999999999998874 57899999999988877 5432 2 223556776
Q ss_pred C-CEEEEEeCCCcEEEEeCCC-CceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeE---EEEe
Q 010362 360 G-SRVVTASSDCTVKVWDLKS-TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV---VKSF 434 (512)
Q Consensus 360 ~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~---~~~~ 434 (512)
+ ..+++.+.||.+.+|+... ++................++ .+...|++ ..++..+.++.++++|+.... ...+
T Consensus 162 ~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~v~v~d~~~~~~~~~~~~ 239 (361)
T 2oiz_A 162 RPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDK-DKAHFVSYYGNVYSADFSGDEVKVDGPW 239 (361)
T ss_dssp SSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECS-SEEEEEBTTSEEEEEECSSSSCEEEEEE
T ss_pred CCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccC-CEEEEEeCCCeEEEEEecCCCceecccc
Confidence 5 6788889999999999865 44331111000000111111 12223444 455556678899999987432 1222
Q ss_pred eCCc---ccC----CcEEEEEECCCCCEEEEEeC-----------CCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCC
Q 010362 435 SSGK---REG----GDFVAACVSPKGEWIYCVGE-----------DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN 496 (512)
Q Consensus 435 ~~~~---~~~----~~~~~~~~s~~g~~l~~g~~-----------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~ 496 (512)
.... ... .....++++|+++.++++.. .+.|.+||..+++.+..+..+. +.+++|+|+++
T Consensus 240 ~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~ 317 (361)
T 2oiz_A 240 SLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN 317 (361)
T ss_dssp ESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT
T ss_pred cccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC
Confidence 1110 000 11112688999998887654 3589999999999999998877 99999999999
Q ss_pred eEEEEECCCeEEEecC
Q 010362 497 LLATYGEDCTMKLWKP 512 (512)
Q Consensus 497 ~l~s~~~dg~i~iW~~ 512 (512)
+|++++. +.|.+||+
T Consensus 318 ~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 318 LMLTLDG-GNVNVYDI 332 (361)
T ss_dssp EEEEECS-SCEEEEEC
T ss_pred EEEEeCC-CeEEEEEC
Confidence 9998886 99999985
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=6.6e-18 Score=154.53 Aligned_cols=245 Identities=13% Similarity=0.222 Sum_probs=178.4
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEE-cCCCCeEEEEeC-CCeEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF-SRDSEMLASGSQ-DGKIK 288 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-s~~~~~l~s~~~-dg~i~ 288 (512)
++-..+.+++++|+|+++++.+.++.|.+||.. ++....+... ....++...+.++++ .+++.++++... ++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~--~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGEC--GKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCB--SSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEeccc--CCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 455678999999999998888889999999976 4443332210 011224567899999 467776666543 88999
Q ss_pred EEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee--CCccceeEEEEcCCCCEEEEE
Q 010362 289 VWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR--GHSSYVNDAIFTNDGSRVVTA 366 (512)
Q Consensus 289 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 366 (512)
+|| .+++.+..+...+...+.+++++|+|+.+++...++.|.+||. .++.+..+. .+...+.+++++|+|+.+++.
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 999 6777777765445567899999999988777777899999996 466666654 344568899999999877777
Q ss_pred eCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEE
Q 010362 367 SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVA 446 (512)
Q Consensus 367 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (512)
..++.|++||.. ++....+... + ....+..
T Consensus 182 ~~~~~i~~~~~~-g~~~~~~~~~------------------g-------------------------------~~~~p~~ 211 (286)
T 1q7f_A 182 NRAHCVKVFNYE-GQYLRQIGGE------------------G-------------------------------ITNYPIG 211 (286)
T ss_dssp GGGTEEEEEETT-CCEEEEESCT------------------T-------------------------------TSCSEEE
T ss_pred CCCCEEEEEcCC-CCEEEEEccC------------------C-------------------------------ccCCCcE
Confidence 778899999864 3322222100 0 0123678
Q ss_pred EEECCCCCEEEEEeCCC-eEEEEEcCCCeeEEeccccCC--CeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 447 ACVSPKGEWIYCVGEDR-NLYCFSHQSGKLEHLMKVHEK--DVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 447 ~~~s~~g~~l~~g~~dg-~i~iwd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
++++++|+++++...++ .|.+||. +++.+..+..+.. .+.+++++|+++++++ +.|++|++|+.
T Consensus 212 i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 212 VGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred EEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 89999998888887776 9999995 5666666655433 4779999999987777 67999999974
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=2.3e-19 Score=172.43 Aligned_cols=274 Identities=10% Similarity=0.021 Sum_probs=184.4
Q ss_pred eEEEEECCCCCEEEEEeCC---CeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEc
Q 010362 216 AECARFSPDGQFLVSCSFD---GFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI 292 (512)
Q Consensus 216 v~~~~~s~~~~~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~ 292 (512)
+.+++|||||++|+.+... ..|.+||+.+++...... ++......+.|+|||+.|+.++.++.|++||+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~--------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~ 109 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE--------GKGDNTFGGFISTDERAFFYVKNELNLMKVDL 109 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC--------SSCBCTTTCEECTTSSEEEEEETTTEEEEEET
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec--------CCCCccccceECCCCCEEEEEEcCCcEEEEEC
Confidence 6778999999998877543 478889988876543211 12222334789999999999999999999999
Q ss_pred cCCeeeEEeccccccCeEE-------------------EEEecCCCEEEEE-----eCCCcEEEEeCCCCceeEEeeCCc
Q 010362 293 RSGQCLRRLERAHSEGVTS-------------------LVFSRDGSQILST-----SFDSTARIHGLKSGKLLKEFRGHS 348 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~-----~~dg~v~i~d~~~~~~~~~~~~~~ 348 (512)
.+++...... .+...... +.|+|+++.++.+ ..+..|++||+.+++..... .+.
T Consensus 110 ~~~~~~~~~~-~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~ 187 (396)
T 3c5m_A 110 ETLEEQVIYT-VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDT 187 (396)
T ss_dssp TTCCEEEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EES
T ss_pred CCCCcEEEEe-cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCC
Confidence 9887654443 22222212 3456777766544 35668999999888765444 456
Q ss_pred cceeEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC---
Q 010362 349 SYVNDAIFTN-DGSRVVTASSD------CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT--- 418 (512)
Q Consensus 349 ~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~--- 418 (512)
..+..+.|+| ++..|+..+.+ ..|.+||+..+.... +... .....+..+.|+|++..+++++..+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~ 262 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEH----AEGESCTHEFWIPDGSAMAYVSYFKGQT 262 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCC----CTTEEEEEEEECTTSSCEEEEEEETTTC
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eecc----CCCccccceEECCCCCEEEEEecCCCCc
Confidence 6789999999 78877766543 358888887654322 2211 1134678899999985555554332
Q ss_pred -CcEEEEecCCeEEEEeeCCcccCCcEEEEEECC-CCCEEEEEe----------------CCCeEEEEEcCCCeeEEecc
Q 010362 419 -SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSP-KGEWIYCVG----------------EDRNLYCFSHQSGKLEHLMK 480 (512)
Q Consensus 419 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~----------------~dg~i~iwd~~~~~~~~~~~ 480 (512)
+.|++||+.+.....+.... ... ..|+| ||+++++++ .++.|++||+.+++.. .+.
T Consensus 263 ~~~l~~~d~~~g~~~~l~~~~----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~ 336 (396)
T 3c5m_A 263 DRVIYKANPETLENEEVMVMP----PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLC 336 (396)
T ss_dssp CEEEEEECTTTCCEEEEEECC----SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEE
T ss_pred cceEEEEECCCCCeEEeeeCC----CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-Ecc
Confidence 34999999855444333222 123 88999 999888765 3478999999888754 344
Q ss_pred ccCC-----------CeEEEEEcCCCCeEEEEEC-CCeEEEe
Q 010362 481 VHEK-----------DVIGVTHHPHRNLLATYGE-DCTMKLW 510 (512)
Q Consensus 481 ~h~~-----------~v~~v~~~p~~~~l~s~~~-dg~i~iW 510 (512)
.+.. .+..++|+|+++.|+.++. ++...+|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 337 KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEE
Confidence 4443 2567899999998877764 5665665
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=1.4e-18 Score=178.77 Aligned_cols=282 Identities=11% Similarity=0.042 Sum_probs=194.4
Q ss_pred cCcCceEEEEECCCCCEEEEE--eCCCeEEEEEcCCCeeeccccccccceeeccCccee---------EEEEc--CCCCe
Q 010362 211 GTKSHAECARFSPDGQFLVSC--SFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVL---------CIEFS--RDSEM 277 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~---------~l~~s--~~~~~ 277 (512)
+|...+..++|++++-+++++ +.++...||....+..... +..|...+. ...|+ |||+.
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEES--------ALPAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEE--------SSCTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcce--------eCCCCccccccccccCCccceeeeecCCCe
Confidence 788899999999887777777 5688999998643332222 222444444 55565 99998
Q ss_pred -EEEEeC-CCeEEEEEcc--C-CeeeEEeccc----cccCeEEEEEecCCCEEEEEeCC----------CcEEEEeCCC-
Q 010362 278 -LASGSQ-DGKIKVWRIR--S-GQCLRRLERA----HSEGVTSLVFSRDGSQILSTSFD----------STARIHGLKS- 337 (512)
Q Consensus 278 -l~s~~~-dg~i~vwd~~--~-~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d----------g~v~i~d~~~- 337 (512)
|+.++. +..|.++++. . +. ...+... +...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 93 ~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 93 LLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp EEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred EEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 776654 4566666665 2 43 4444421 56678999999999999998876 5899999987
Q ss_pred -----CceeEEee-CCccceeEEEEcCCCCEEEEEeCC--------CcEEEEeCC-CCc--eeeecCCCCCCCCCCceeE
Q 010362 338 -----GKLLKEFR-GHSSYVNDAIFTNDGSRVVTASSD--------CTVKVWDLK-STD--CLQTFKPPPPLRGGDASVN 400 (512)
Q Consensus 338 -----~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~i~ 400 (512)
++. ..+. .+...+..++|+|||++|+.++.+ ..|.+||+. ++. ....+. ..+...+.
T Consensus 172 ~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-----~~~~~~~~ 245 (662)
T 3azo_A 172 AAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-----GGPEEAIA 245 (662)
T ss_dssp TTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-----EETTBCEE
T ss_pred ccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-----CCCCceEc
Confidence 443 4455 556678889999999999887755 379999998 562 222222 12346788
Q ss_pred EEEEcCCCCCeEEEEcCCC--cEEEEecCCeEEEEeeCCcccCC------cEEEEEECCCCCEEEEEeCCCeEEEE--Ec
Q 010362 401 SVHLFPKNPDHIVVCNKTS--SIYIMTLQGQVVKSFSSGKREGG------DFVAACVSPKGEWIYCVGEDRNLYCF--SH 470 (512)
Q Consensus 401 ~~~~~~~~~~~l~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~s~~g~~l~~g~~dg~i~iw--d~ 470 (512)
.+.|+|++. ++++++.++ .|+.|+..+.....+........ .+..++++|+++++++++. +.+.+| |.
T Consensus 246 ~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~ 323 (662)
T 3azo_A 246 QAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDP 323 (662)
T ss_dssp EEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEET
T ss_pred ceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEEC
Confidence 999999995 888888888 67777765554444443321110 1456888999999999998 998888 65
Q ss_pred CCCeeEEeccccCCCeEEE-EEcCCCCeEEEEECCCeEEEe
Q 010362 471 QSGKLEHLMKVHEKDVIGV-THHPHRNLLATYGEDCTMKLW 510 (512)
Q Consensus 471 ~~~~~~~~~~~h~~~v~~v-~~~p~~~~l~s~~~dg~i~iW 510 (512)
.+++ +..+..|...+..+ +++++.-++++++.+....+|
T Consensus 324 ~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 324 ESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp TTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 5565 56777777778777 555444455566666555555
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=9.7e-18 Score=158.31 Aligned_cols=289 Identities=13% Similarity=0.129 Sum_probs=198.1
Q ss_pred cccccccCccccceEEEecCcCceEEEEECCCCCEEEEEe----------CCCeEEEEEcCCCeeeccccccccceeecc
Q 010362 193 KQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS----------FDGFIEVWDYLSGKLKKDLQYQADETFMMH 262 (512)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h 262 (512)
...++|....+...++..+ ..+ .++|+|||+++++++ .++.|.+||..+++....+...... ..+
T Consensus 32 ~v~v~D~~t~~~~~~i~~g-~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~--~~~ 106 (361)
T 2oiz_A 32 RVHVYDYTNGKFLGMVPTA-FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR--VQG 106 (361)
T ss_dssp EEEEEETTTCCEEEEEECC-EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB--CCB
T ss_pred eEEEEECCCCeEEEEecCC-CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc--ccc
Confidence 3445565566666677643 333 899999999999886 3678999999888777655432110 012
Q ss_pred CcceeEEEEcCCCCeEEEEeC--CCeEEEEEccCCeeeEE-eccccccCeEEEEEecCC-CEEEEEeCCCcEEEEeCCC-
Q 010362 263 DETVLCIEFSRDSEMLASGSQ--DGKIKVWRIRSGQCLRR-LERAHSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKS- 337 (512)
Q Consensus 263 ~~~v~~l~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~i~d~~~- 337 (512)
......++++|||++|+++.. +++|.+||+.+++.+.. +. .. ....+.+.|++ ..+++.+.||.+.+|+...
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA--AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG--GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTT
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec--CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCC
Confidence 345778999999999998874 57999999999988877 54 22 22335677765 6778888999999999865
Q ss_pred CceeEE------eeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee--eecCCCCC----CCCCCceeEEEEEc
Q 010362 338 GKLLKE------FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL--QTFKPPPP----LRGGDASVNSVHLF 405 (512)
Q Consensus 338 ~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~----~~~~~~~i~~~~~~ 405 (512)
++.... +.....++ .+.+++++..++..+.++.+.++|+...... ..+..... ..........++++
T Consensus 184 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE
T ss_pred CcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe
Confidence 554422 12222222 3344677778888888999999998754321 11111000 00000111236788
Q ss_pred CCCCCeEEEEc----------CCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-
Q 010362 406 PKNPDHIVVCN----------KTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG- 473 (512)
Q Consensus 406 ~~~~~~l~~~~----------~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~- 473 (512)
|++...+++.. ..+.+.+||.. ++.+..+..+ . ...++++|||++|++++. +.|.+||..++
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~----~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~ 336 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR----D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPE 336 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT----T-CCEEEEETTTTEEEEECS-SCEEEEECSSSS
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC----C-eeEEEECCCCCEEEEeCC-CeEEEEECCCCc
Confidence 98755555543 13579999998 4555555443 2 778999999999999887 99999999999
Q ss_pred -eeEEeccccCCCeEEEEEcCCCC
Q 010362 474 -KLEHLMKVHEKDVIGVTHHPHRN 496 (512)
Q Consensus 474 -~~~~~~~~h~~~v~~v~~~p~~~ 496 (512)
+.+..+..+......++++|+|+
T Consensus 337 l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 337 PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEEEETTSCSSEEEEEECCCSC
T ss_pred ceeeEEeccCCCCcEEEEecCCCC
Confidence 99988866778889999999985
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=2.1e-17 Score=154.26 Aligned_cols=246 Identities=11% Similarity=0.107 Sum_probs=183.0
Q ss_pred cCceEEEEECCCCCEEEEEeCC------------------------CeEEEEEcCCCeeeccccccccceeeccCcceeE
Q 010362 213 KSHAECARFSPDGQFLVSCSFD------------------------GFIEVWDYLSGKLKKDLQYQADETFMMHDETVLC 268 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~ 268 (512)
-+.+.+++++|+|+++++.+.+ ++|.+||..+++...... .++-..+..
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-------~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG-------KNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC-------TTTCSSEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC-------CCccCCceE
Confidence 3569999999999999988877 479999998887654322 124457899
Q ss_pred EEEcCCCCeEEEEeCCCeEEEEEccCCe-eeEEec--------cccccCeEEEEEec-CCCEEEEEe-CCCcEEEEeCCC
Q 010362 269 IEFSRDSEMLASGSQDGKIKVWRIRSGQ-CLRRLE--------RAHSEGVTSLVFSR-DGSQILSTS-FDSTARIHGLKS 337 (512)
Q Consensus 269 l~~s~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~--------~~~~~~i~~~~~~~-~~~~l~~~~-~dg~v~i~d~~~ 337 (512)
++++|+|+++++...++.|++||..... .+..+. ..+-..+..++++| ++..+++.+ .++.|++|| .+
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 9999999988888889999999975442 444442 13344689999999 788777776 689999999 57
Q ss_pred CceeEEeeCC----------ccceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcC
Q 010362 338 GKLLKEFRGH----------SSYVNDAIFTND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 406 (512)
Q Consensus 338 ~~~~~~~~~~----------~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 406 (512)
++.+..+... -..+..++++|+ +..+++...++.|++||..+++.+..+... .....+.+++++|
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~----~~~~~~~~~~~~p 250 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA----SFGRNVFAISYIP 250 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT----TTTTCEEEEEEET
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc----ccCCCcceeeecC
Confidence 7777766422 234889999998 677777778899999999988888777533 2345677888888
Q ss_pred CCCCeEEE-------EcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q 010362 407 KNPDHIVV-------CNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 407 ~~~~~l~~-------~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~ 472 (512)
+ ..+.. ...+..+++|+.. +..+..+.....+...+..++++|+|..+++...++.|++|++..
T Consensus 251 -g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 251 -G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp -T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred -C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 2 22222 2334589999976 555555543333455688999999998888888899999999753
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=6.5e-18 Score=158.21 Aligned_cols=270 Identities=11% Similarity=0.090 Sum_probs=191.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 293 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~ 293 (512)
..|.+++|++++..++..+.++.++.|. ++... .+..+...+.+++|+|++++++++..++.|.+||..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~ 74 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---AEPWL--------EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPE 74 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEE--------EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred cccceeeecCCccceeEEeecccCcccc---cceeE--------EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCC
Confidence 3467788999888887777788899883 22222 233366678999999999988888889999999998
Q ss_pred CCeeeEEeccccccCeEEEEEecCCCEEEEEeCC----CcEEEEeCCCCceeEEee--CCccceeEEEEcCCCCEEEEEe
Q 010362 294 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD----STARIHGLKSGKLLKEFR--GHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
+++...... .+...+.+++++|+++++++...+ +.|.+||..++.....+. .+...+.+++++|+|+.+++..
T Consensus 75 ~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 75 TKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp TCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred CCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 887654432 456789999999999877777666 689999998776543333 2345689999999998777665
Q ss_pred C------CCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC--CeEEEEe-----
Q 010362 368 S------DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ--GQVVKSF----- 434 (512)
Q Consensus 368 ~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~~~~~----- 434 (512)
. .+.|..+|..+++...... ....+..++++|++..++++...++.|++|+.. +.....+
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~ 226 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTVTPIIQ-------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIP 226 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCEEEEEE-------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEE
T ss_pred cccccCCCceEEEEeCCCCEEEEeec-------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEE
Confidence 3 3556677765544322211 122467899999884466666778999999984 3322211
Q ss_pred eCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCC------CeEEEEEcCCCCeEEEEECC
Q 010362 435 SSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEK------DVIGVTHHPHRNLLATYGED 504 (512)
Q Consensus 435 ~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~v~~~p~~~~l~s~~~d 504 (512)
.... ....+..++++++|++.++...++.|.+||. +++.+..+..+.. .+.+++|+|++..|+.++.+
T Consensus 227 ~~~~-~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 227 YYFT-GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EECC-SSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EecC-CCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 1111 1135678999999998888778899999998 5666666654433 68899999998766655544
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=9.4e-18 Score=174.34 Aligned_cols=294 Identities=12% Similarity=0.100 Sum_probs=190.4
Q ss_pred ccccccccCccccceEEEecCcCc-----eEEEEECCCCCEEEEEeCC---------CeEEEEEcCCCeeeccccccccc
Q 010362 192 MKQDVEDMYPTTLSHTIKFGTKSH-----AECARFSPDGQFLVSCSFD---------GFIEVWDYLSGKLKKDLQYQADE 257 (512)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~s~~~~~l~sg~~d---------g~i~iwd~~~~~~~~~~~~~~~~ 257 (512)
.....|+.........+. +|... ...++|||||++|+.++.+ +.+.+||+.+++...
T Consensus 36 ~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-------- 106 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLE-NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-------- 106 (740)
T ss_dssp TEEEEEETTTCCEEEEEC-TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--------
T ss_pred CcEEEEECCCCceEEEEe-chhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE--------
Confidence 345566666665544443 55432 2347899999999999876 567799999987543
Q ss_pred eeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCe-----------------EEEEEecCCCE
Q 010362 258 TFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGV-----------------TSLVFSRDGSQ 320 (512)
Q Consensus 258 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~~~ 320 (512)
+..|...+...+|||||+.||.++ |+.|++|++.++...+....++...+ ..+.|+|||+.
T Consensus 107 -l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~ 184 (740)
T 4a5s_A 107 -EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF 184 (740)
T ss_dssp -SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE
T ss_pred -cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCE
Confidence 223677899999999999999985 78999999988875543322332222 35899999999
Q ss_pred EEEEeCCC------------------------------------cEEEEeCCC---Cc--eeEEee------CCccceeE
Q 010362 321 ILSTSFDS------------------------------------TARIHGLKS---GK--LLKEFR------GHSSYVND 353 (512)
Q Consensus 321 l~~~~~dg------------------------------------~v~i~d~~~---~~--~~~~~~------~~~~~v~~ 353 (512)
|+.++.|. .|++||+.+ ++ ....+. +|...+..
T Consensus 185 la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (740)
T 4a5s_A 185 LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCD 264 (740)
T ss_dssp EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEE
T ss_pred EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEE
Confidence 99875332 478899988 63 233343 37778999
Q ss_pred EEEcCCCCEEEEEeC----CCcEEEEeCCCCc----eeeecCCCCCCCCCCce-----eEEEEEcCCCCCeE-EEEcCCC
Q 010362 354 AIFTNDGSRVVTASS----DCTVKVWDLKSTD----CLQTFKPPPPLRGGDAS-----VNSVHLFPKNPDHI-VVCNKTS 419 (512)
Q Consensus 354 ~~~~~~~~~l~~~~~----dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~l-~~~~~~~ 419 (512)
++|+|||+.++.... +..|.+||+.+++ +........ ..+... .....|+|++..++ .....+|
T Consensus 265 ~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~--~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G 342 (740)
T 4a5s_A 265 VTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE--MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG 342 (740)
T ss_dssp EEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE--ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS
T ss_pred EEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee--ccCCceEccCcCCCceEcCCCCEEEEEEEcCCC
Confidence 999999997665533 3369999999887 322211000 012222 23678999985555 3443444
Q ss_pred --cEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC-------CeEEEEEcCCCeeEEeccc----cCCCe
Q 010362 420 --SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED-------RNLYCFSHQSGKLEHLMKV----HEKDV 486 (512)
Q Consensus 420 --~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-------g~i~iwd~~~~~~~~~~~~----h~~~v 486 (512)
.|++|+..+.....+..+. ..+..+. ++|++.|+..+.. ..|+..++..+.....+.. ....+
T Consensus 343 ~~~l~~~~~~~~~~~~lT~g~---~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~ 418 (740)
T 4a5s_A 343 YRHICYFQIDKKDCTFITKGT---WEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQY 418 (740)
T ss_dssp CEEEEEEETTCSSCEESCCSS---SCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCB
T ss_pred ceEEEEEECCCCceEecccCC---EEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCce
Confidence 5788888877666665442 2344433 2446666655543 2455566655544333432 24568
Q ss_pred EEEEEcCCCCeEEEEE
Q 010362 487 IGVTHHPHRNLLATYG 502 (512)
Q Consensus 487 ~~v~~~p~~~~l~s~~ 502 (512)
..+.|+|++++++...
T Consensus 419 ~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 419 YSVSFSKEAKYYQLRC 434 (740)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEe
Confidence 8999999998766443
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.81 E-value=4.9e-17 Score=153.16 Aligned_cols=256 Identities=13% Similarity=0.156 Sum_probs=176.2
Q ss_pred ceEEEEECCCCCEEEEEe---------CCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC-
Q 010362 215 HAECARFSPDGQFLVSCS---------FDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD- 284 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d- 284 (512)
.+..+++ ||++++... .++.|.+||+.+++... + ..+..++|+|||++|+.++.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---------l----~~~~~~~~SpDg~~la~~~~~~ 80 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF---------I----ENATMPRISPDGKKIAFMRANE 80 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE---------E----ESCEEEEECTTSSEEEEEEEET
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE---------c----ccCCCeEECCCCCEEEEEEecc
Confidence 4666777 888887642 26789999998875321 1 457889999999999988754
Q ss_pred --C--eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCC---------------------------CcEEEE
Q 010362 285 --G--KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD---------------------------STARIH 333 (512)
Q Consensus 285 --g--~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------------------g~v~i~ 333 (512)
+ .|.+|++.+++...... +.. +..++|+|||+.|+.++.+ ..|++|
T Consensus 81 ~~~~~~l~~~~~~~g~~~~l~~--~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 81 EKKVSEIWVADLETLSSKKILE--AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEEE--ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEE
T ss_pred CCCcceEEEEECCCCceEEEEc--CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEE
Confidence 3 48888888887655443 233 9999999999999888642 579999
Q ss_pred eCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcC
Q 010362 334 GLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC-------TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFP 406 (512)
Q Consensus 334 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 406 (512)
|+.+++.+..+.. . .+..+.|+|+| .++++..++ ...+|.+.+++. ..+.. + ..+..+ +|
T Consensus 158 d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~------~-~~~~~~--sp 224 (347)
T 2gop_A 158 DTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFE------K-VSFYAV--DS 224 (347)
T ss_dssp ETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEE------E-ESEEEE--EE
T ss_pred ECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEecc------C-cceeeE--CC
Confidence 9988876455554 4 78899999999 777776542 344554444432 22221 1 233333 88
Q ss_pred CCCCeEEEEcC-------CCcEEEEecCCeEEEEeeCCcccCCcEEE-EEECCCCCEEEEEeCCCeEEEEEcCCCeeEEe
Q 010362 407 KNPDHIVVCNK-------TSSIYIMTLQGQVVKSFSSGKREGGDFVA-ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL 478 (512)
Q Consensus 407 ~~~~~l~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~ 478 (512)
++..+++.+.. ...|++|| .+. ...+... +...+.. +.|+ || ++++++.++.+++| +.+++....
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~--~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~ 297 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD-GKE-VMGILDE--VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPI 297 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC-SSC-EEESSTT--CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEE
T ss_pred CCCEEEEEEccccCCccccceEEEEC-CCc-eEecccc--CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEE
Confidence 88555444433 24688888 443 3333322 2345665 8899 88 88999999999999 877766444
Q ss_pred ccccCCCeEEEEEcCCCCeEEEEECCCeE-EEec
Q 010362 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTM-KLWK 511 (512)
Q Consensus 479 ~~~h~~~v~~v~~~p~~~~l~s~~~dg~i-~iW~ 511 (512)
+ .+...|.+++|+| .++++++.++.. .+|.
T Consensus 298 ~-~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 298 A-KGRHWIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp E-CSSSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred e-cCCCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 4 4577899999999 677777777654 6663
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=5.3e-18 Score=162.44 Aligned_cols=234 Identities=13% Similarity=0.167 Sum_probs=163.6
Q ss_pred EEEcCCCCeEEEEeC-CC--eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee
Q 010362 269 IEFSRDSEMLASGSQ-DG--KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR 345 (512)
Q Consensus 269 l~~s~~~~~l~s~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~ 345 (512)
.+|+|||++|+.++. +| .|.+||+.+++...... .+...+..+.|+|||+.|+.++.++.|++||+.+++....+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC-SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee-CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 789999999999887 66 48888998888765543 555555577899999999999999999999999998877666
Q ss_pred CCccceeEEE--EcCCCCEEEEEe----------------------CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEE
Q 010362 346 GHSSYVNDAI--FTNDGSRVVTAS----------------------SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS 401 (512)
Q Consensus 346 ~~~~~v~~~~--~~~~~~~l~~~~----------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~ 401 (512)
.+...+.... ++|++..++... .++.|.+||+.+++...... +...+..
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-------~~~~~~~ 192 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-------ENQWLGH 192 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-------ESSCEEE
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec-------CCccccc
Confidence 6665554444 489999887432 34679999999886544332 2346788
Q ss_pred EEEcC-CCCCeEEEEcC------CCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeC-CC----eEEEEE
Q 010362 402 VHLFP-KNPDHIVVCNK------TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE-DR----NLYCFS 469 (512)
Q Consensus 402 ~~~~~-~~~~~l~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~-dg----~i~iwd 469 (512)
+.|+| ++ ..++.+.. ...+++++..+.....+.... ....+...+|+|||+.|+..+. ++ .|++||
T Consensus 193 ~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 193 PIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA-EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCC-TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred cEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCC-CCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 99999 77 55544443 347888888876655554432 1124678899999998766543 22 399999
Q ss_pred cCCCeeEE--eccccCC---CeEEEEEcCCCCeEEEE---------ECCCeEEEecC
Q 010362 470 HQSGKLEH--LMKVHEK---DVIGVTHHPHRNLLATY---------GEDCTMKLWKP 512 (512)
Q Consensus 470 ~~~~~~~~--~~~~h~~---~v~~v~~~p~~~~l~s~---------~~dg~i~iW~~ 512 (512)
+.+++... .+.++.. ....+.|+|||+.|+.. +.+..|++||+
T Consensus 271 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 271 PETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp TTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred cCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 99987533 2322110 11224799999877753 45668999974
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=5.7e-17 Score=166.74 Aligned_cols=254 Identities=13% Similarity=0.073 Sum_probs=161.6
Q ss_pred EEEEC--CCCCE-EEEEeC-CCeEEEEEcC--C-CeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC------
Q 010362 218 CARFS--PDGQF-LVSCSF-DGFIEVWDYL--S-GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD------ 284 (512)
Q Consensus 218 ~~~~s--~~~~~-l~sg~~-dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d------ 284 (512)
...|+ |||+. |+.++. +..|.+|++. + ++.. .+.... ...|...+.+++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~~~~---~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 156 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLTPVS---AVGGGLRWADPVLLPERGEVWCMAEEFTGEGP 156 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCE-ECSCCC---CSTTCEEEEEEEEETTTTEEEEEEEEECSSST
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCE-eccCCc---cCCCCccccCcEECCCCCEEEEEEecccCCCC
Confidence 55555 99998 776653 5667777765 2 3321 111000 00156678999999999999998877
Q ss_pred ----CeEEEEEccC------CeeeEEeccccccCeEEEEEecCCCEEEEEeCC--------CcEEEEeCC-CC---ceeE
Q 010362 285 ----GKIKVWRIRS------GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD--------STARIHGLK-SG---KLLK 342 (512)
Q Consensus 285 ----g~i~vwd~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~v~i~d~~-~~---~~~~ 342 (512)
..|++||+.+ ++.. .+...+...+..++|+|||++|+.++.+ ..|++||+. ++ +...
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 157 SDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp TCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred CCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 5899999988 5543 3320344678889999999999988755 379999998 56 3444
Q ss_pred EeeCCccceeEEEEcCCCCEEEEEeCCC--cEEEEeCCCCceeeecCCCCCCCC--CCceeEEEEEcCCCCCeEEEEcCC
Q 010362 343 EFRGHSSYVNDAIFTNDGSRVVTASSDC--TVKVWDLKSTDCLQTFKPPPPLRG--GDASVNSVHLFPKNPDHIVVCNKT 418 (512)
Q Consensus 343 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~~ 418 (512)
...+|...+..+.|+|||+++++++.++ .|.+||+.+++............. -...+..++++|++ .+++++..
T Consensus 236 l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~~- 313 (662)
T 3azo_A 236 LLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANG-LIAVVHGK- 313 (662)
T ss_dssp EEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTS-CEEEEEBS-
T ss_pred eCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCC-EEEEEEEc-
Confidence 4444567899999999999888888888 566677666654433221111100 00114567788876 68888888
Q ss_pred CcEEEE--ecCCeEEEEeeCCcccCCcEEEEEECCCCCE--EEEEeCCC--eEEEEEcCCCeeEEecccc
Q 010362 419 SSIYIM--TLQGQVVKSFSSGKREGGDFVAACVSPKGEW--IYCVGEDR--NLYCFSHQSGKLEHLMKVH 482 (512)
Q Consensus 419 ~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~--l~~g~~dg--~i~iwd~~~~~~~~~~~~h 482 (512)
+.+.+| |..+.....+... ...+..+ +++++.. +++++.+. .|+.+|+.+++.......+
T Consensus 314 ~~~~l~~~d~~~~~~~~l~~~---~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~ 379 (662)
T 3azo_A 314 GAAVLGILDPESGELVDAAGP---WTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARH 379 (662)
T ss_dssp SSCEEEEEETTTTEEEECCSS---CCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCC
T ss_pred CccEEEEEECCCCcEEEecCC---CCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCC
Confidence 888888 5555555555432 3345544 1444443 33444443 5667777777755443333
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=9.2e-15 Score=134.30 Aligned_cols=278 Identities=12% Similarity=0.098 Sum_probs=196.6
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVW 290 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vw 290 (512)
.+...+.+++++++|+++++...++.|.+||.. ++... +.. ..+...+.++++.++|.+.++...++.|..|
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YPL------PTPDAKVMCLTISSDGEVWFTENAANKIGRI 83 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EEC------SSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ecC------CcccCceeeEEECCCCCEEEeCCCCCeEEEE
Confidence 345679999999999988877668999999987 54322 110 1134678999999999988877768899999
Q ss_pred EccCCeeeEEecc-ccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEE-eeCCccceeEEEEcCCCCEEEEEeC
Q 010362 291 RIRSGQCLRRLER-AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDGSRVVTASS 368 (512)
Q Consensus 291 d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~ 368 (512)
|.. ++. ..+.. .....+.++++.+++..+++...++.|..||. +++.... ...+...+.+++++++|+..++...
T Consensus 84 ~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 160 (299)
T 2z2n_A 84 TKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ 160 (299)
T ss_dssp CTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred CCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC
Confidence 976 443 22221 24557899999999988777777889999998 5554432 2234456899999999987777777
Q ss_pred CCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEE
Q 010362 369 DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC 448 (512)
Q Consensus 369 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (512)
++.|..||. +++.... ... .....+.++++.+++ .++++...++.+..++..+. ...+... .....+..++
T Consensus 161 ~~~i~~~~~-~g~~~~~-~~~----~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~-~~~~~~~-~~~~~~~~i~ 231 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEF-KIP----TPASGPVGITKGNDD-ALWFVEIIGNKIGRITTSGE-ITEFKIP-TPNARPHAIT 231 (299)
T ss_dssp TTEEEEECT-TCCEEEE-ECS----STTCCEEEEEECTTS-SEEEEETTTTEEEEECTTCC-EEEEECS-STTCCEEEEE
T ss_pred CCEEEEEcC-CCcEEEe-eCC----CCCCcceeEEECCCC-CEEEEccCCceEEEECCCCc-EEEEECC-CCCCCceeEE
Confidence 789999998 6554332 111 123467889999886 56676667889999999544 3333222 2235688999
Q ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCeeEEe-ccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 449 VSPKGEWIYCVGEDRNLYCFSHQSGKLEHL-MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 449 ~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
++++|+..++...++.|..||. ++..... +..+...+.++++ +++.++++.+ .+.|..++
T Consensus 232 ~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~ 292 (299)
T 2z2n_A 232 AGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLT 292 (299)
T ss_dssp ECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEE
T ss_pred ECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEE
Confidence 9999996666657899999998 4554322 3345567899999 8888777655 45555554
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.77 E-value=1.3e-16 Score=164.94 Aligned_cols=241 Identities=12% Similarity=0.118 Sum_probs=170.1
Q ss_pred cCcceeEEEEcCCCCeEEEEeCCC-----eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCc-------
Q 010362 262 HDETVLCIEFSRDSEMLASGSQDG-----KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST------- 329 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~------- 329 (512)
|...+..++|||||++||.++.++ .|++||+.+++...... ....+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE--EEECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc--cCcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 555789999999999999876543 89999999998766432 2233778999999999999988766
Q ss_pred ---------EEEEeCCCCcee--EEee--CCccceeEEEEcCCCCEEEEEeC-----CCcEEEEeCCC------Cc-eee
Q 010362 330 ---------ARIHGLKSGKLL--KEFR--GHSSYVNDAIFTNDGSRVVTASS-----DCTVKVWDLKS------TD-CLQ 384 (512)
Q Consensus 330 ---------v~i~d~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~-~~~ 384 (512)
|++|++.+++.. ..+. .|...+.++.|+|||++|+.++. +..|.+||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 999999887632 2223 24556788999999999887764 56899999976 42 233
Q ss_pred ecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC---CcEEEEecCCeE---EEEeeCCcccCCcEEEEEECCCCCEEEE
Q 010362 385 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT---SSIYIMTLQGQV---VKSFSSGKREGGDFVAACVSPKGEWIYC 458 (512)
Q Consensus 385 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~---~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 458 (512)
.+... ...+.. .++|++..+++.+..+ ..|.+|++.+.. ...+.... ....+..+++++++.++++
T Consensus 281 ~l~~~------~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 281 KLIDN------FEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-EKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp EEECS------SSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-SSCEEEEEEEETTTEEEEE
T ss_pred EeeCC------CCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-CCCeEEEEEEEcCCEEEEE
Confidence 33221 122222 4777775555555543 369999987532 23333322 1235677888888888888
Q ss_pred EeCCCe--EEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEE-EEE---CCCeEEEecC
Q 010362 459 VGEDRN--LYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLA-TYG---EDCTMKLWKP 512 (512)
Q Consensus 459 g~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-s~~---~dg~i~iW~~ 512 (512)
...++. |++|++.+|+.+..+..+.+.+..+.++|++..++ +.+ ..++|..||+
T Consensus 353 ~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 353 YLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred EEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 888884 66778777887777877888899999999887555 333 3477888873
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.76 E-value=7e-15 Score=145.75 Aligned_cols=304 Identities=12% Similarity=0.115 Sum_probs=211.0
Q ss_pred cccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcC--CCeeeccccccccceeeccCcceeE
Q 010362 191 AMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYL--SGKLKKDLQYQADETFMMHDETVLC 268 (512)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~h~~~v~~ 268 (512)
.....+.|....+...++..+. .+.++.|||||+++++++.|+.|.+||+. +++....+. .......
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g~--~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~---------~G~~P~~ 244 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK---------IGSEARS 244 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECSS--CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE---------CCSEEEE
T ss_pred CCeEEEEECCCCeEEEEEeCCC--CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe---------cCCCCce
Confidence 3455667777777777776443 56799999999999999999999999995 666554433 2334679
Q ss_pred EEEc----CCCCeEEEEeC-CCeEEEEEccCCeeeEEeccc---------c-ccCeEEEEEecCCCEEEEE-eCCCcEEE
Q 010362 269 IEFS----RDSEMLASGSQ-DGKIKVWRIRSGQCLRRLERA---------H-SEGVTSLVFSRDGSQILST-SFDSTARI 332 (512)
Q Consensus 269 l~~s----~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~---------~-~~~i~~~~~~~~~~~l~~~-~~dg~v~i 332 (512)
++|+ |||+++++++. +++|.++|..+.+.+..+... | ...+..+..++++..++.. ..+|.|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 9999 69998887765 589999999999988776522 1 1257888889887665544 45689999
Q ss_pred EeCCCCceeE--EeeCCccceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCceeeecCC-CCCCCCCCceeEEEEEcCCC
Q 010362 333 HGLKSGKLLK--EFRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKSTDCLQTFKP-PPPLRGGDASVNSVHLFPKN 408 (512)
Q Consensus 333 ~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~ 408 (512)
+|..+.+... .+. ......++.|+|++++++++. .++.|.++|+.+++....+.. .. ..|.+.-.. .++|++
T Consensus 325 vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~--~Phpg~g~~-~~~p~~ 400 (567)
T 1qks_A 325 VDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ--TPHPGRGAN-FVHPTF 400 (567)
T ss_dssp EETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS--SBCCTTCEE-EEETTT
T ss_pred EecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCc--CCCCcccee-eECCCC
Confidence 9987654332 222 234567889999999987765 578899999999987776643 11 112211111 256765
Q ss_pred CCeEEEEc-CCCcEEEEecCC--------eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeC-------CCeEEEEEcCC
Q 010362 409 PDHIVVCN-KTSSIYIMTLQG--------QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE-------DRNLYCFSHQS 472 (512)
Q Consensus 409 ~~~l~~~~-~~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~-------dg~i~iwd~~~ 472 (512)
...++++. .++.|.++|... +.+..+.... ..-..+..+|+++++++... .+.|.++|+.+
T Consensus 401 g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g---~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 401 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG---GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC---SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC---CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 45666554 568999999874 3444444321 22234678999999998773 35999999987
Q ss_pred C-----e-eEEecc--------ccCCCeEEEEEcCCCCeEEEEE-----CCCeEEEecC
Q 010362 473 G-----K-LEHLMK--------VHEKDVIGVTHHPHRNLLATYG-----EDCTMKLWKP 512 (512)
Q Consensus 473 ~-----~-~~~~~~--------~h~~~v~~v~~~p~~~~l~s~~-----~dg~i~iW~~ 512 (512)
. . ....+. .....+..+.|+|+|+.+..+. .++.|.|+|.
T Consensus 478 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 478 MTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp CCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred ccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 6 2 112221 1235688999999998766553 3788998874
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=5.1e-16 Score=144.64 Aligned_cols=260 Identities=11% Similarity=0.129 Sum_probs=185.5
Q ss_pred CCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEE
Q 010362 233 FDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSL 312 (512)
Q Consensus 233 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~ 312 (512)
.+++|.+||..+++....+..... -.........+++. +++..++...++.|.+||..+++.+.++. .......+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n--~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~--~~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRAN--GFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT--GFTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHH--SSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE--CCSSEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhc--CcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC--CCCCCcEE
Confidence 488999999999987765421100 01122446777774 35555666668999999999999988884 45678999
Q ss_pred EEecCCCEEEEEe-CCCcEEEEeCCCCceeEEeeCCc-----cceeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCceee
Q 010362 313 VFSRDGSQILSTS-FDSTARIHGLKSGKLLKEFRGHS-----SYVNDAIFTNDGSRVVTAS--SDCTVKVWDLKSTDCLQ 384 (512)
Q Consensus 313 ~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~ 384 (512)
++++++ .++++. .++.|.+||..+++....+.... .....+++ . +..+++++ .++.|.++|+.+++...
T Consensus 90 ~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 90 HFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp EEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred EEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 999998 455555 78999999999998887776433 14567777 3 44555554 48899999999998777
Q ss_pred ecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC----------CcEEEEecCC-eEEEEeeCCcccCCcEEEEEECCCC
Q 010362 385 TFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT----------SSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKG 453 (512)
Q Consensus 385 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~----------~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g 453 (512)
.+... .....+.+.|++ .+++++..+ +.|.++|... .....+.... +.....++++|++
T Consensus 167 ~i~~g-------~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~--g~~p~~la~~~d~ 236 (328)
T 3dsm_A 167 ELTIG-------IQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL--GDWPSEVQLNGTR 236 (328)
T ss_dssp EEECS-------SCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT--TCCCEEEEECTTS
T ss_pred EEEcC-------CCccceEEcCCC-CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC--CCCceeEEEecCC
Confidence 76532 234567888877 566665554 7899999984 4444443321 2357899999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeEEe--ccccCCCeEEEEEcC-CCCeEEEE----ECCCeEEEecC
Q 010362 454 EWIYCVGEDRNLYCFSHQSGKLEHL--MKVHEKDVIGVTHHP-HRNLLATY----GEDCTMKLWKP 512 (512)
Q Consensus 454 ~~l~~g~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~v~~~p-~~~~l~s~----~~dg~i~iW~~ 512 (512)
++++++.. .|++||..+++.... +..+.....+++++| ++.++++. ..++.|.+||+
T Consensus 237 ~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 237 DTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp CEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred CEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 99998765 899999998876422 222246788999999 56666666 57899999986
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=1.5e-17 Score=159.64 Aligned_cols=237 Identities=12% Similarity=0.113 Sum_probs=162.1
Q ss_pred CcceeEEEEcCCCCeEEEEeCC---CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc
Q 010362 263 DETVLCIEFSRDSEMLASGSQD---GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGK 339 (512)
Q Consensus 263 ~~~v~~l~~s~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~ 339 (512)
...+.+++|+|||++|+.+... ..|.+||+.+++...... .+......+.|+|||+.|+.++.++.|++||+.+++
T Consensus 35 ~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 35 RNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp CCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec-CCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 3447788999999998877543 478889998887544332 333333347899999999999999999999998887
Q ss_pred eeEEeeCCccceeE-------------------EEEcCCCCEEEEE-----eCCCcEEEEeCCCCceeeecCCCCCCCCC
Q 010362 340 LLKEFRGHSSYVND-------------------AIFTNDGSRVVTA-----SSDCTVKVWDLKSTDCLQTFKPPPPLRGG 395 (512)
Q Consensus 340 ~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 395 (512)
.......+...... +.|+|+++.++.+ ..+..|.+||+.+++...... +
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-------~ 186 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-------D 186 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-------E
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-------C
Confidence 66655544432222 3457777766544 356689999998877544332 3
Q ss_pred CceeEEEEEcC-CCCCeEEEEcCC------CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC-----C
Q 010362 396 DASVNSVHLFP-KNPDHIVVCNKT------SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED-----R 463 (512)
Q Consensus 396 ~~~i~~~~~~~-~~~~~l~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g 463 (512)
...+..+.|+| ++ ..++..+.+ ..|++++..+.....+... .....+..++|+|||++|+.++.+ +
T Consensus 187 ~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 187 TAWLGHPIYRPFDD-STVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH-AEGESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp SSCEEEEEEETTEE-EEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC-CTTEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred CcccccceECCCCC-CEEEEEecCCCCCCCceEEEEECCCCceeEeecc-CCCccccceEECCCCCEEEEEecCCCCccc
Confidence 34678899999 55 444443332 4688899876654444431 112347788999999988777643 4
Q ss_pred eEEEEEcCCCeeEEeccccCCCeEEEEEcC-CCCeEEEEE----------------CCCeEEEecC
Q 010362 464 NLYCFSHQSGKLEHLMKVHEKDVIGVTHHP-HRNLLATYG----------------EDCTMKLWKP 512 (512)
Q Consensus 464 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~~----------------~dg~i~iW~~ 512 (512)
.|++||+.+++........ ... +.|+| +++++++++ .++.|.+||+
T Consensus 265 ~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred eEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 5999999988755433211 133 89999 999888765 3478999874
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=4.7e-16 Score=160.85 Aligned_cols=246 Identities=14% Similarity=0.118 Sum_probs=173.1
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCC-----eEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDG-----FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
+|...+..++|||||++||.++.++ .|++||+.+++..... + ....+..++|+|||+.|+.++.++
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-------~--~~~~~~~~~wspDg~~l~~~~~~~ 192 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-------L--ERVKFSCMAWTHDGKGMFYNAYPQ 192 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-------E--EEECSCCEEECTTSSEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-------c--cCcccceEEEEeCCCEEEEEEECC
Confidence 3445688999999999999876543 8999999998865421 1 222367899999999999998876
Q ss_pred e----------------EEEEEccCCeee--EEec-cccccCeEEEEEecCCCEEEEEeC-----CCcEEEEeCCC----
Q 010362 286 K----------------IKVWRIRSGQCL--RRLE-RAHSEGVTSLVFSRDGSQILSTSF-----DSTARIHGLKS---- 337 (512)
Q Consensus 286 ~----------------i~vwd~~~~~~~--~~~~-~~~~~~i~~~~~~~~~~~l~~~~~-----dg~v~i~d~~~---- 337 (512)
. |++|++.++... ..+. ..+...+..+.|+|||++|+.++. +..|++||+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 193 QDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred ccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccc
Confidence 6 999999887622 2222 124556889999999999988765 56899999976
Q ss_pred --Cc-eeEEeeCCccceeEEEEcCCCCEEEEEeCC----CcEEEEeCCCCce--eeecCCCCCCCCCCceeEEEEEcCCC
Q 010362 338 --GK-LLKEFRGHSSYVNDAIFTNDGSRVVTASSD----CTVKVWDLKSTDC--LQTFKPPPPLRGGDASVNSVHLFPKN 408 (512)
Q Consensus 338 --~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~ 408 (512)
+. ....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+.... ....+.++.+++.+
T Consensus 273 ~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 273 ITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH----EKDVLEWVACVRSN 347 (710)
T ss_dssp SCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC----SSCEEEEEEEETTT
T ss_pred cCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC----CCCeEEEEEEEcCC
Confidence 43 45566666655554 588899888776653 3599999987642 22222211 11367788888544
Q ss_pred CCeEEEEcCCCc--EEEEec-CCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe----CCCeEEEEEcCCCe
Q 010362 409 PDHIVVCNKTSS--IYIMTL-QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG----EDRNLYCFSHQSGK 474 (512)
Q Consensus 409 ~~~l~~~~~~~~--i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~----~dg~i~iwd~~~~~ 474 (512)
.++++...++. |++|++ .+.....+... .+.+..++++|++..++... ..+.|+.||+.+++
T Consensus 348 -~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~---~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 348 -FLVLCYLHDVKNTLQLHDLATGALLKIFPLE---VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp -EEEEEEEETTEEEEEEEETTTCCEEEEECCC---SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred -EEEEEEEECCEEEEEEEECCCCCEEEecCCC---CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 67777777774 666777 45555554432 45677889999998766443 35789999998876
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=2e-15 Score=136.32 Aligned_cols=245 Identities=13% Similarity=0.104 Sum_probs=184.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccC-cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEec
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHD-ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE 302 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 302 (512)
.+++|++++.|+.|.+||.++++....+.. +. ..+.+++++|+|++++ +.++.|..||. +|+.+.++.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~--------~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL--------EKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC--------CTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC--------CccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEc
Confidence 467899999999999999989998876543 33 4688999999999888 34778999998 899999887
Q ss_pred cccccCeEEEEEecCCCEEEEEeC-CCcEEEEeCCCCceeEEeeC------CccceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010362 303 RAHSEGVTSLVFSRDGSQILSTSF-DSTARIHGLKSGKLLKEFRG------HSSYVNDAIFTNDGSRVVTASSDCTVKVW 375 (512)
Q Consensus 303 ~~~~~~i~~~~~~~~~~~l~~~~~-dg~v~i~d~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 375 (512)
......+.++.+.|+|+.+++.+. ++.|..+|. +++.+..+.. +......+.+.++|+++++...++.|..|
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 151 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEE
T ss_pred CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEE
Confidence 433457889999999999999887 788888886 7887776642 22345667889999999999999999999
Q ss_pred eCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCccc---CCcEEEEEECC
Q 010362 376 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKRE---GGDFVAACVSP 451 (512)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~s~ 451 (512)
|.. ++.+.++... ..+.++...+++ .+++++..++.+..+|.. ++.+..+...... -..+..++..+
T Consensus 152 d~~-G~~~w~~~~~-------~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~ 222 (276)
T 3no2_A 152 APN-GQLLNSVKLS-------GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ 222 (276)
T ss_dssp CTT-SCEEEEEECS-------SCCCEEEECTTS-CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred CCC-CCEEEEEECC-------CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC
Confidence 998 9888887643 234456667766 788888888899999999 8887777643211 23367888899
Q ss_pred CCCEEEEEeCC--------CeEEEEEc-CCCeeEEeccccC--CCeEEE
Q 010362 452 KGEWIYCVGED--------RNLYCFSH-QSGKLEHLMKVHE--KDVIGV 489 (512)
Q Consensus 452 ~g~~l~~g~~d--------g~i~iwd~-~~~~~~~~~~~h~--~~v~~v 489 (512)
+|+.+++.... +..+++.+ .+|+.+-.+..+. +.+.++
T Consensus 223 ~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~ 271 (276)
T 3no2_A 223 NGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTI 271 (276)
T ss_dssp TSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEE
T ss_pred CCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcccccceeee
Confidence 99988887421 23345555 5777776665432 344444
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=1.8e-15 Score=136.60 Aligned_cols=220 Identities=14% Similarity=0.154 Sum_probs=174.0
Q ss_pred CCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCc-ccee
Q 010362 274 DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS-SYVN 352 (512)
Q Consensus 274 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~-~~v~ 352 (512)
.+++|++++.|+.|.+||..+|+.+.++.......+.++.++|+|++++ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 4678999999999999999999999998732225789999999999888 45788999998 899999998753 4688
Q ss_pred EEEEcCCCCEEEEEeC-CCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEE
Q 010362 353 DAIFTNDGSRVVTASS-DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 431 (512)
Q Consensus 353 ~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 431 (512)
++.+.++|+.+++.+. ++.+..+|. +++.+..+...............+...+++ .++++...++.|..||..++.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G-~~lv~~~~~~~v~~~d~~G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKG-NYLVPLFATSEVREIAPNGQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTS-CEEEEETTTTEEEEECTTSCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCC-CEEEEecCCCEEEEECCCCCEE
Confidence 8999999999999887 778888885 677766665332222222344455677776 7889999999999999998888
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccC------CCeEEEEEcCCCCeEEEEE
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHE------KDVIGVTHHPHRNLLATYG 502 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~------~~v~~v~~~p~~~~l~s~~ 502 (512)
..+.... ....+...++|+.+++++.++.|..+|..+|+.+..+..+. ..+..++..+++.++++..
T Consensus 159 w~~~~~~----~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 159 NSVKLSG----TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEECSS----CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEECCC----CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 7776542 24457778999999999999999999999999988876432 2378888999999888774
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.74 E-value=6.2e-17 Score=166.92 Aligned_cols=275 Identities=11% Similarity=0.038 Sum_probs=176.5
Q ss_pred CCCCEEEEEeCCC---eEEEE--EcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEE-----EeCCCeEEEEEc
Q 010362 223 PDGQFLVSCSFDG---FIEVW--DYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS-----GSQDGKIKVWRI 292 (512)
Q Consensus 223 ~~~~~l~sg~~dg---~i~iw--d~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s-----~~~dg~i~vwd~ 292 (512)
|+|++++....++ .-.+| +...++...-+. ....-.+|...+..++|||||++||. |+.+..|++||+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d--~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLD--PNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEEC--GGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEc--hHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 6777777665443 23344 433333211111 11111236667999999999999994 444568999999
Q ss_pred cCCeee-EEeccccccCeEEEEEecCCCEEEEEeCCCc-------------EEEEeCCCCc----eeEEeeCCccceeEE
Q 010362 293 RSGQCL-RRLERAHSEGVTSLVFSRDGSQILSTSFDST-------------ARIHGLKSGK----LLKEFRGHSSYVNDA 354 (512)
Q Consensus 293 ~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-------------v~i~d~~~~~----~~~~~~~~~~~v~~~ 354 (512)
.+++.+ .... .......++|+|||+.|+.++.|.. |++|++.++. .+.....+...+.++
T Consensus 155 ~tg~~~~~~~~--~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 155 DSGEWSKVDVI--EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TTCCBCSSCCB--SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCCcCCccc--CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 999865 2111 1111268999999999999998776 9999998876 233333455678899
Q ss_pred EEcCCCCEEEEEeCCC----cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc---CCCcEEEEecC
Q 010362 355 IFTNDGSRVVTASSDC----TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN---KTSSIYIMTLQ 427 (512)
Q Consensus 355 ~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~~~~i~~~~~~ 427 (512)
.|+|||++|+.++.++ .|.+||..++... .+.. +...+....+ +++. +++.+. .++.|.+|++.
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~------~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVK------GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEE------CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTT
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eeec------CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCC
Confidence 9999999998877665 6777766554322 2221 1223344444 5665 555555 35789999987
Q ss_pred CeE---EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC-CCeeEEecccc-CCCeEEEEEcCCCCeEE-EE
Q 010362 428 GQV---VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ-SGKLEHLMKVH-EKDVIGVTHHPHRNLLA-TY 501 (512)
Q Consensus 428 ~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~v~~~p~~~~l~-s~ 501 (512)
+.. ...+.... ....+..++++ ++.++++...|+..++|.+. +++....+..+ .+.+..++++|++..++ +.
T Consensus 304 ~~~~~~~~~l~~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 381 (695)
T 2bkl_A 304 KPARASWKEIVPED-SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVF 381 (695)
T ss_dssp BCSGGGCEEEECCC-SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEE
T ss_pred CCCccCCeEEecCC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEE
Confidence 432 13333221 13346677887 77888888899988887655 45556666655 66788899999887666 22
Q ss_pred E---CCCeEEEecC
Q 010362 502 G---EDCTMKLWKP 512 (512)
Q Consensus 502 ~---~dg~i~iW~~ 512 (512)
+ ..++|++||.
T Consensus 382 ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 382 TSFTTPRQIYKTSV 395 (695)
T ss_dssp EETTEEEEEEEEET
T ss_pred cCCCCCCEEEEEEC
Confidence 2 3477888873
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=2.2e-15 Score=138.45 Aligned_cols=231 Identities=11% Similarity=0.018 Sum_probs=168.6
Q ss_pred eeccCcceeEEEEcCCCC-eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC
Q 010362 259 FMMHDETVLCIEFSRDSE-MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 259 ~~~h~~~v~~l~~s~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 337 (512)
+..+.....+++|+|+++ +++++..++.|..||..++ ...+. .+...+.+++++|+|+++++...++.|.+||..+
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~-~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM-HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE-SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE-CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 334556788999999998 7788888999999999877 45554 4667799999999999877776678999999988
Q ss_pred CceeEEeeCC----ccceeEEEEcCCCCEEEEEeC-----------------CCcEEEEeCCCCceeeecCCCCCCCCCC
Q 010362 338 GKLLKEFRGH----SSYVNDAIFTNDGSRVVTASS-----------------DCTVKVWDLKSTDCLQTFKPPPPLRGGD 396 (512)
Q Consensus 338 ~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 396 (512)
++........ ...+.+++++|+|+++++.+. .+.|..++.. ++... +. ...
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~------~~~ 171 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA-PI------RDR 171 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE-EE------CCC
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEE-ee------cCC
Confidence 8754433221 234678999999998887321 3456666655 43322 21 123
Q ss_pred ceeEEEEEcCCCCCeEEEEcCCCcEEEEecC--CeE---EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Q 010362 397 ASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ--GQV---VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 397 ~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~ 471 (512)
.....++++|++ ..+++.+.++.|++|++. +.. ...+ . .....+..++++++|++.++. ++.|.+||..
T Consensus 172 ~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~--~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 172 VKPNGLAFLPSG-NLLVSDTGDNATHRYCLNARGETEYQGVHF-T--VEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp SSEEEEEECTTS-CEEEEETTTTEEEEEEECSSSCEEEEEEEE-C--CSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCCccEEECCCC-CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e--CCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 456889999998 445888888999999986 332 2233 2 123445679999999866655 8899999986
Q ss_pred CCeeEEeccccCCCeEEEEE-cCCCCeEEEEECCCeEE
Q 010362 472 SGKLEHLMKVHEKDVIGVTH-HPHRNLLATYGEDCTMK 508 (512)
Q Consensus 472 ~~~~~~~~~~h~~~v~~v~~-~p~~~~l~s~~~dg~i~ 508 (512)
++.+..+..+.. +++++| .|+++.|++++.++..+
T Consensus 246 -g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 246 -GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp -SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEE
T ss_pred -CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEE
Confidence 778888877777 999999 58998888888876444
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=4.2e-15 Score=136.48 Aligned_cols=240 Identities=12% Similarity=0.107 Sum_probs=173.4
Q ss_pred cCcCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 211 GTKSHAECARFSPDGQ-FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
.+.....+++|+|+|+ +++++..++.|..||..++ ... +..+...+.+++++|+|+++++...++.|.+
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~--------~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSP--------EMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEE--------EESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEE--------EECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 4556688999999998 7888888999999998876 222 2236677999999999998887777789999
Q ss_pred EEccCCeeeEEecc---ccccCeEEEEEecCCCEEEEE----e-------------CCCcEEEEeCCCCceeEEeeCCcc
Q 010362 290 WRIRSGQCLRRLER---AHSEGVTSLVFSRDGSQILST----S-------------FDSTARIHGLKSGKLLKEFRGHSS 349 (512)
Q Consensus 290 wd~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~----~-------------~dg~v~i~d~~~~~~~~~~~~~~~ 349 (512)
||..+++....... .....+..++++|+|+++++. + ..+.|..++.. ++ ...+..+..
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~ 172 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRV 172 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCS
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCC
Confidence 99988875443321 112356789999999988873 2 13456666654 44 344455666
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCC-CCce---eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEe
Q 010362 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLK-STDC---LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMT 425 (512)
Q Consensus 350 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~ 425 (512)
.+..++|+|+++.+++.+.++.|.+||+. ++.. ...+ . .....+.++++.+++ .++++. ++.|.+|+
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~-----~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T-----VEPGKTDGLRVDAGG-LIWASA--GDGVHVLT 243 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C-----CSSSCCCSEEEBTTS-CEEEEE--TTEEEEEC
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e-----CCCCCCCeEEECCCC-CEEEEc--CCeEEEEC
Confidence 78899999999988777778999999987 4443 2222 1 123455678999987 555555 88999999
Q ss_pred cCCeEEEEeeCCcccCCcEEEEEE-CCCCCEEEEEeCCCeEEEEEcCCCeeE
Q 010362 426 LQGQVVKSFSSGKREGGDFVAACV-SPKGEWIYCVGEDRNLYCFSHQSGKLE 476 (512)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~-s~~g~~l~~g~~dg~i~iwd~~~~~~~ 476 (512)
..+.....+.... . +.+++| +|+++.|++++.+ .+..++..+.++.
T Consensus 244 ~~g~~~~~~~~~~---~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 244 PDGDELGRVLTPQ---T-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp TTSCEEEEEECSS---C-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCC
T ss_pred CCCCEEEEEECCC---C-ceeEEEECCCCCEEEEEcCC-eEEEEEccccccc
Confidence 9988777665433 2 677888 6999999998875 5666677666544
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.74 E-value=2e-14 Score=135.60 Aligned_cols=274 Identities=9% Similarity=-0.003 Sum_probs=186.0
Q ss_pred ECCCCCEEEEEeC--CC---eEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe----------CCC
Q 010362 221 FSPDGQFLVSCSF--DG---FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS----------QDG 285 (512)
Q Consensus 221 ~s~~~~~l~sg~~--dg---~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----------~dg 285 (512)
..|+++++++... .+ +|.+||..+++....+.. ...+ .++++|||++++++. .++
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~--------g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~ 97 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--------GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTD 97 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC--------CCCC--CeEECCCCCEEEEEeccccccccCCCCC
Confidence 3467777666653 22 889999999887654432 2233 999999999999886 367
Q ss_pred eEEEEEccCCeeeEEeccc-c-----ccCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeEE-eeCCccceeEEEE
Q 010362 286 KIKVWRIRSGQCLRRLERA-H-----SEGVTSLVFSRDGSQILSTSF--DSTARIHGLKSGKLLKE-FRGHSSYVNDAIF 356 (512)
Q Consensus 286 ~i~vwd~~~~~~~~~~~~~-~-----~~~i~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~ 356 (512)
.|.+||..+.+.+..+..+ . ......+.|+|||++|++++. ++.|.++| .+++.+.. +.... ++.+
T Consensus 98 ~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~ 172 (373)
T 2mad_H 98 YVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHI 172 (373)
T ss_pred eEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEE
Confidence 8999999998888776532 0 133568999999999999874 47899999 99988877 65322 2445
Q ss_pred cCCC-CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeE---EE
Q 010362 357 TNDG-SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV---VK 432 (512)
Q Consensus 357 ~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~---~~ 432 (512)
.|++ ..+++.+.||.+.++|. +++............+.........+.+++..++++. ..+.+.+.|..+.. ..
T Consensus 173 ~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~ 250 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKA 250 (373)
T ss_pred EeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEee
Confidence 5554 45667778999999999 7776533221110011111112334555554444444 67889999986432 12
Q ss_pred EeeCCc-------ccCCcEEEEEECCCCCEEEEEeC----------CCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCC
Q 010362 433 SFSSGK-------REGGDFVAACVSPKGEWIYCVGE----------DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR 495 (512)
Q Consensus 433 ~~~~~~-------~~~~~~~~~~~s~~g~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~ 495 (512)
.+.... ........+.++|+++.+++... .+.|.++|..+++.+..+.. .....+++|+||+
T Consensus 251 ~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg 329 (373)
T 2mad_H 251 PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDG 329 (373)
T ss_pred eeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCC
Confidence 221100 00122344788999998888754 35799999999999988863 3468899999999
Q ss_pred C-eEEEEE-CCCeEEEecC
Q 010362 496 N-LLATYG-EDCTMKLWKP 512 (512)
Q Consensus 496 ~-~l~s~~-~dg~i~iW~~ 512 (512)
+ .++++. .++.|.+||+
T Consensus 330 ~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 330 GPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred CeEEEEEcCCCCeEEEEEC
Confidence 9 777777 5899999985
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=6.9e-15 Score=145.77 Aligned_cols=272 Identities=13% Similarity=0.116 Sum_probs=195.2
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc--CCeeeEE
Q 010362 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR--SGQCLRR 300 (512)
Q Consensus 223 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~--~~~~~~~ 300 (512)
|.+.++++...+++|.++|..+++....+. ....+..+.|+|||+++++++.|+.|.+||+. +++.+.+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~---------~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLD---------TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEE---------CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEe---------CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE
Confidence 455567777789999999999998776554 33456799999999999999999999999996 8888877
Q ss_pred eccccccCeEEEEEe----cCCCEEEEEeC-CCcEEEEeCCCCceeEEeeCC-----------ccceeEEEEcCCCCEE-
Q 010362 301 LERAHSEGVTSLVFS----RDGSQILSTSF-DSTARIHGLKSGKLLKEFRGH-----------SSYVNDAIFTNDGSRV- 363 (512)
Q Consensus 301 ~~~~~~~~i~~~~~~----~~~~~l~~~~~-dg~v~i~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l- 363 (512)
+.. ......++|+ |||+++++++. ++.|.++|..+.+.+..+... ...+..+..++++..+
T Consensus 236 i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~v 313 (567)
T 1qks_A 236 IKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFI 313 (567)
T ss_dssp EEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEE
T ss_pred Eec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEE
Confidence 762 3457899999 69999888765 589999999999988876532 1257788888876654
Q ss_pred EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeC-Cc-cc
Q 010362 364 VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSS-GK-RE 440 (512)
Q Consensus 364 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~-~~-~~ 440 (512)
+....+|.|.++|..+.+....... ........+.|+|++..+++++..++.|.++|... +....... .. .+
T Consensus 314 v~~~~~g~v~~vd~~~~~~~~v~~i-----~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 314 VNVKETGKILLVDYTDLNNLKTTEI-----SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPH 388 (567)
T ss_dssp EEETTTTEEEEEETTCSSEEEEEEE-----ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBC
T ss_pred EEecCCCeEEEEecCCCccceeeee-----eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCC
Confidence 4455679999999887543222111 11234567889999966677777899999999984 44444443 22 12
Q ss_pred CCcEEEEEECCCCCEEEEEe--CCCeEEEEEcCC-------CeeEEeccccCCCeEEEEEcCCCCeEEEEEC-------C
Q 010362 441 GGDFVAACVSPKGEWIYCVG--EDRNLYCFSHQS-------GKLEHLMKVHEKDVIGVTHHPHRNLLATYGE-------D 504 (512)
Q Consensus 441 ~~~~~~~~~s~~g~~l~~g~--~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~-------d 504 (512)
.+.-.. .++|++..+++.+ .++.|.++|..+ .+.++.+......-..+..+|+++++..... .
T Consensus 389 pg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~ 467 (567)
T 1qks_A 389 PGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEIS 467 (567)
T ss_dssp CTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHH
T ss_pred Ccccee-eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccC
Confidence 111112 2588855555443 568999999987 5677777755444345789999998887653 3
Q ss_pred CeEEEec
Q 010362 505 CTMKLWK 511 (512)
Q Consensus 505 g~i~iW~ 511 (512)
++|.++|
T Consensus 468 ~~v~v~d 474 (567)
T 1qks_A 468 GSVAVFD 474 (567)
T ss_dssp TCEEEEE
T ss_pred ceEEEEE
Confidence 5788876
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=3.7e-15 Score=134.87 Aligned_cols=236 Identities=9% Similarity=-0.018 Sum_probs=168.4
Q ss_pred ceeEEEEcCCCCeEE-EEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEE
Q 010362 265 TVLCIEFSRDSEMLA-SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE 343 (512)
Q Consensus 265 ~v~~l~~s~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~ 343 (512)
...+++++++|++++ +.+.++.|.+||..++... .+.......+.+++++++++.+++.. ++.|.+||...... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-ee
Confidence 678999999998777 5467889999997655432 22223345688999999998655555 88999999865543 33
Q ss_pred ee-CCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 344 FR-GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 344 ~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
+. .....+.+++++++|+.+++...++.|.+|+..+........ .....+.++++.+++ .++++...++.|.
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~------~~~~~p~~i~~~~~g-~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF------TGLNDPDGVAVDNSG-NVYVTDTDNNRVV 174 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC------CSCCSCCCEEECTTC-CEEEEEGGGTEEE
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc------ccCCCceeEEEeCCC-CEEEEECCCCEEE
Confidence 33 233568899999999977777778899999765543322111 122356788999977 5777777789999
Q ss_pred EEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEE
Q 010362 423 IMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYG 502 (512)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~ 502 (512)
.|+..+......... ....+..++++++|.+.++...++.|.+|+............+...+.+++++|+++++++..
T Consensus 175 ~~~~~~~~~~~~~~~--~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 175 KLEAESNNQVVLPFT--DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp EECTTTCCEEECCCS--SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEG
T ss_pred EEecCCCceEeeccc--CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEEC
Confidence 999986654443221 124578999999997777777789999999876554433333446789999999999888988
Q ss_pred CCCeEEEecC
Q 010362 503 EDCTMKLWKP 512 (512)
Q Consensus 503 ~dg~i~iW~~ 512 (512)
.+++|+++++
T Consensus 253 ~~~~v~~~~~ 262 (270)
T 1rwi_B 253 GNDRVVKLTS 262 (270)
T ss_dssp GGTEEEEECC
T ss_pred CCCEEEEEcC
Confidence 9999999874
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=1.1e-14 Score=136.18 Aligned_cols=254 Identities=14% Similarity=0.133 Sum_probs=173.8
Q ss_pred eEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC-
Q 010362 206 HTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD- 284 (512)
Q Consensus 206 ~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d- 284 (512)
..+. ++...+.+++|+|+|++++++..++.|.+||..+++..... ..+...+.+++|+|+|++++++..+
T Consensus 38 ~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~--------~~~~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 38 LEIS-KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF--------VSHKANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp EEEE-SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE--------ECSSSSEEEEEECTTSCEEEEECTTS
T ss_pred EEEe-ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe--------eCCCCCcceEEECCCCcEEEEeCCCC
Confidence 3443 56667899999999998888888999999998877654321 1256789999999999988877666
Q ss_pred ---CeEEEEEccCCeeeEEec-cccccCeEEEEEecCCCEEEEEeC------CCcEEEEeCCCCceeEEeeCCccceeEE
Q 010362 285 ---GKIKVWRIRSGQCLRRLE-RAHSEGVTSLVFSRDGSQILSTSF------DSTARIHGLKSGKLLKEFRGHSSYVNDA 354 (512)
Q Consensus 285 ---g~i~vwd~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~v~~~ 354 (512)
+.|.+||..++.....+. ......+.+++++|+|+.+++... .+.|..+|..+++... +..+...+..+
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i 187 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGI 187 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEE
T ss_pred CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccce
Confidence 689999988876543332 123457899999999987776653 3567777765554433 32333457889
Q ss_pred EEcCCCCEEEE-EeCCCcEEEEeCCC-CceeeecCC--CCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeE
Q 010362 355 IFTNDGSRVVT-ASSDCTVKVWDLKS-TDCLQTFKP--PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV 430 (512)
Q Consensus 355 ~~~~~~~~l~~-~~~dg~i~iwd~~~-~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~ 430 (512)
+|+|+++.++. .+.++.|.+||+.+ +.....+.. .....+ ...+..+++.+++ .++++...++.|.+|+..+..
T Consensus 188 ~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~g~~ 265 (333)
T 2dg1_A 188 ALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDD-NLYVAMYGQGRVLVFNKRGYP 265 (333)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTC-CEEEEEETTTEEEEECTTSCE
T ss_pred EECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC-CCCCCceEECCCC-CEEEEEcCCCEEEEECCCCCE
Confidence 99999986654 45578999999964 332221100 000011 1467789999987 677777778899999998776
Q ss_pred EEEeeCCccc---CCcEEEEEECCCCCEEEEEeCCC------eEEEEEcC
Q 010362 431 VKSFSSGKRE---GGDFVAACVSPKGEWIYCVGEDR------NLYCFSHQ 471 (512)
Q Consensus 431 ~~~~~~~~~~---~~~~~~~~~s~~g~~l~~g~~dg------~i~iwd~~ 471 (512)
...+...... ...+..++|+||++.|++++.++ .|+.++..
T Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 266 IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred EEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 6666543210 11467899999988887776553 45555543
No 192
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.72 E-value=9.5e-14 Score=127.55 Aligned_cols=279 Identities=11% Similarity=0.077 Sum_probs=197.0
Q ss_pred CcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEE
Q 010362 212 TKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR 291 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd 291 (512)
....+.+++++++|++.++...++.|.+||.. ++... +. +..+...+.++++.+++.+.++...++.|..||
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~------~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FE------VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLS 89 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EE------CSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EE------CCCCCCcceeEEECCCCCEEEEecCCCeEEEEC
Confidence 34578899999999988877778999999977 54432 11 112346789999999998777776678999999
Q ss_pred ccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEE-eeCCccceeEEEEcCCCCEEEEEeCCC
Q 010362 292 IRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE-FRGHSSYVNDAIFTNDGSRVVTASSDC 370 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg 370 (512)
.. ++............+.++++.+++..+++...++.|..+|.. ++.... +......+.++++.++++..++...++
T Consensus 90 ~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 167 (300)
T 2qc5_A 90 KK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNN 167 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT
T ss_pred CC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCC
Confidence 87 654322211234678999999999877777668899999986 554422 232345688999999999666666678
Q ss_pred cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEEC
Q 010362 371 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVS 450 (512)
Q Consensus 371 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 450 (512)
.|..||. +++... +..+ .....+..+++.+++ .++++....+.|..++..+........ .....+..++++
T Consensus 168 ~i~~~~~-~g~~~~-~~~~----~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~g~~~~~~~~--~~~~~~~~i~~d 238 (300)
T 2qc5_A 168 SIGRITN-TGKLEE-YPLP----TNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTTGEISEYDIP--TPNARPHAITAG 238 (300)
T ss_dssp EEEEECT-TCCEEE-EECS----STTCCEEEEEECTTS-SEEEEETTTTEEEEECTTCCEEEEECS--STTCCEEEEEEC
T ss_pred eEEEECC-CCcEEE-eeCC----CCCCCcceEEECCCC-CEEEEccCCCEEEEEcCCCcEEEEECC--CCCCCceEEEEC
Confidence 8999998 554432 2211 223467889999876 677766777889999986554332221 123457899999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeeEE-eccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 451 PKGEWIYCVGEDRNLYCFSHQSGKLEH-LMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 451 ~~g~~l~~g~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
++|+..++...++.|..||. +++... .+......+.++++++++.++++.. . .|..++|
T Consensus 239 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 239 KNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp STTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 99996666667799999998 454432 2333456688999999998776654 4 6776664
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=2.4e-16 Score=162.62 Aligned_cols=247 Identities=14% Similarity=0.037 Sum_probs=166.5
Q ss_pred cCcCceEEEEECCCCCEEEE-----EeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 211 GTKSHAECARFSPDGQFLVS-----CSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~s-----g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
+|...+.+++|||||++||. |+.+..|++||+.+++...... + .......++|+|||+.|+.++.|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~------~--~~~~~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV------I--EGGKYATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC------B--SCCTTCCCEECTTSSEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc------c--CcccccceEEecCCCEEEEEEecC
Confidence 45557899999999999994 4445789999999987541100 1 111126899999999999999877
Q ss_pred e-------------EEEEEccCCee--eEEec-cccccCeEEEEEecCCCEEEEEeCCC----cEEEEeCCCCceeEEee
Q 010362 286 K-------------IKVWRIRSGQC--LRRLE-RAHSEGVTSLVFSRDGSQILSTSFDS----TARIHGLKSGKLLKEFR 345 (512)
Q Consensus 286 ~-------------i~vwd~~~~~~--~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg----~v~i~d~~~~~~~~~~~ 345 (512)
. |++|++.++.. ...+. ..+...+.++.|+|||++|+.++.++ .|++|+..+++ ...+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~ 268 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLV 268 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEee
Confidence 6 99999988762 12222 13446788999999999998887666 67778765554 34444
Q ss_pred CCccceeEEEEcCCCCEEEEEe---CCCcEEEEeCCCCce--eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCc
Q 010362 346 GHSSYVNDAIFTNDGSRVVTAS---SDCTVKVWDLKSTDC--LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 420 (512)
Q Consensus 346 ~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~ 420 (512)
.+...+....+ ++|.+++.+. .++.|.+||+.++.. ...+... .....+..+.++ +..++++...++.
T Consensus 269 ~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~----~~~~~l~~~~~~--~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 269 KGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE----DSSASLLSVSIV--GGHLSLEYLKDAT 341 (695)
T ss_dssp ECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC----CSSCEEEEEEEE--TTEEEEEEEETTE
T ss_pred cCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC----CCCCeEEEEEEE--CCEEEEEEEECCE
Confidence 45555666666 5666444443 257899999987642 1222211 113467777877 3367888888888
Q ss_pred EEEEecC--CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe----CCCeEEEEEcCCCee
Q 010362 421 IYIMTLQ--GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG----EDRNLYCFSHQSGKL 475 (512)
Q Consensus 421 i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~----~dg~i~iwd~~~~~~ 475 (512)
.++|.++ +.....+... ..+.+..++++|++..++... ..+.|++||+.+++.
T Consensus 342 ~~l~~~~~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTVQLP--GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEEETTCCEEEECCCS--SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEEEEeCCCCeeEEecCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7777554 5544444322 134566778899998776443 357899999988764
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=4.3e-15 Score=139.79 Aligned_cols=234 Identities=17% Similarity=0.174 Sum_probs=156.9
Q ss_pred CceEEEEECCCCCEEEEEeCC---C--eEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC----
Q 010362 214 SHAECARFSPDGQFLVSCSFD---G--FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD---- 284 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d---- 284 (512)
..+.+++|||||++||.++.+ + .|.+|++.+++..... .+.. +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~---------~~~~-~~~~~wspdg~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL---------EAKN-IRSLEWNEDSRKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE---------EESE-EEEEEECTTSSEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE---------cCCC-ccceeECCCCCEEEEEEccCCCc
Confidence 457889999999999988754 3 4788888877644321 1334 9999999999999888743
Q ss_pred -----------------------CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCC-------cEEEEe
Q 010362 285 -----------------------GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS-------TARIHG 334 (512)
Q Consensus 285 -----------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------~v~i~d 334 (512)
..|.+||+.+++.+..+. . . .+..++|+||| .+++++.++ ...+|.
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~-~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~ 204 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE-K-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYI 204 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEE-E-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEE
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeec-C-C-CcccccCCCCe-EEEEEecccccccccccccEEE
Confidence 579999999888745555 2 3 78899999999 777776542 334444
Q ss_pred CCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCC--------CcEEEEeCCCCceeeecCCCCCCCCCCceeEE-EEEc
Q 010362 335 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD--------CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNS-VHLF 405 (512)
Q Consensus 335 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~ 405 (512)
+.+++ ...+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| +++...... .+...+.. +.|+
T Consensus 205 ~d~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~------~~~~~~~~~~~~s 272 (347)
T 2gop_A 205 WEDGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD------EVDRGVGQAKIKD 272 (347)
T ss_dssp EETTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST------TCCSEEEEEEEET
T ss_pred eCCCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc------cCCcccCCccEEc
Confidence 43444 3344434 445444 9999988877754 3688888 444332221 33556775 8888
Q ss_pred CCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeE-EEEEcCCCeeEEeccccCC
Q 010362 406 PKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNL-YCFSHQSGKLEHLMKVHEK 484 (512)
Q Consensus 406 ~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i-~iwd~~~~~~~~~~~~h~~ 484 (512)
++ ++++++.++.+.+| +.......+... ...+..++++| .++++++.++.. .+|.+. ++ ...+..|..
T Consensus 273 -dg--~~~~~~~~~~~~l~-~~~g~~~~~~~~---~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 273 -GK--VYFTLFEEGSVNLY-IWDGEIKPIAKG---RHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp -TE--EEEEEEETTEEEEE-EESSSEEEEECS---SSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred -Cc--EEEEEecCCcEEEE-EcCCceEEEecC---CCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence 54 88888999999998 763223333322 45688899999 677777766654 666665 54 334554543
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=6e-15 Score=133.46 Aligned_cols=241 Identities=8% Similarity=-0.053 Sum_probs=171.7
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc
Q 010362 215 HAECARFSPDGQFLV-SCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 293 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~ 293 (512)
...+++++++|++++ +.+.++.|.+||..++..... . ..+...+.+++++++|+++++.. ++.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-~-------~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-P-------FNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-C-------CCSCCSCCCEEECTTCCEEEEET-TTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-e-------eCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCC
Confidence 578899999999777 547789999998765442211 0 11335678999999998666655 8899999977
Q ss_pred CCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEE
Q 010362 294 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373 (512)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 373 (512)
++.. ..+.......+.+++++++|+.+++...++.|.+|+..+.............+.+++++++|+.+++...++.|.
T Consensus 96 ~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 96 SNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp CSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred CceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEE
Confidence 6543 333323336789999999998777777788999998655544332223334678999999999777777788999
Q ss_pred EEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCC
Q 010362 374 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453 (512)
Q Consensus 374 iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 453 (512)
+||........... .....+.++++.+++ .++++...++.|..|+..+........ .....+..++++++|
T Consensus 175 ~~~~~~~~~~~~~~------~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~~~~--~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 175 KLEAESNNQVVLPF------TDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTSTVLPF--TGLNTPLAVAVDSDR 245 (270)
T ss_dssp EECTTTCCEEECCC------SSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCCEECCC--CSCSCEEEEEECTTC
T ss_pred EEecCCCceEeecc------cCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcceeecc--CCCCCceeEEECCCC
Confidence 99988765433211 122567889999987 777877788999999998654433222 112457899999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCe
Q 010362 454 EWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 454 ~~l~~g~~dg~i~iwd~~~~~ 474 (512)
+++++...++.|++++....+
T Consensus 246 ~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 246 TVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CEEEEEGGGTEEEEECCCGGG
T ss_pred CEEEEECCCCEEEEEcCCCcc
Confidence 988888899999999987654
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.71 E-value=6.7e-15 Score=136.75 Aligned_cols=276 Identities=12% Similarity=0.060 Sum_probs=188.4
Q ss_pred EECCCCCEEEEEeC-----CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe----------CC
Q 010362 220 RFSPDGQFLVSCSF-----DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS----------QD 284 (512)
Q Consensus 220 ~~s~~~~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----------~d 284 (512)
...|+++.+++... ++.|.+.|..+++....+.. ...+ . ++++|||+++++++ .+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v--------G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG--------GFLP-N-PVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE--------CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC--------CCCC-c-EEECCCCCEEEEEcccccccccCCCC
Confidence 34688888887765 68999999999988876542 2333 4 99999999988776 36
Q ss_pred CeEEEEEccCCeeeEEecccc------ccCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeEEeeCCccceeEEEE
Q 010362 285 GKIKVWRIRSGQCLRRLERAH------SEGVTSLVFSRDGSQILSTSF--DSTARIHGLKSGKLLKEFRGHSSYVNDAIF 356 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~ 356 (512)
+.|.+||..+++.+..+..+. ......+.|+|||++++++.. ++.|.++|+.+++.+.++.... . ...+
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~ 185 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIF 185 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceee
Confidence 789999999999888875322 125667999999999998874 6899999999999998886422 1 2233
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCC-CceeeecCCCCCCCCCCceeE-EEEEcCCCCCeEEEEcCCCcEEEEecCCeEEE--
Q 010362 357 TNDGSRVVTASSDCTVKVWDLKS-TDCLQTFKPPPPLRGGDASVN-SVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK-- 432 (512)
Q Consensus 357 ~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-- 432 (512)
....+.+++.+.||.+.+.++.+ ++........ ......++. ...|.+.+..+++ .+.++.+++.|..+....
T Consensus 186 P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~--~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~ 262 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEV--FHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFL 262 (386)
T ss_dssp EEETTEEEEEETTSCEEEEECCSSSCCEEEECCC--CSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEEC
T ss_pred cCCCceeEEECCCCCEEEEECCCCCeEEEeecce--eccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceee
Confidence 33456777888899999999876 5543221111 111111221 2244332323333 555899999999754322
Q ss_pred -EeeCCc-------ccCCcEEEEEECCCCCEEEEEeC----------CCeEEEEEcCCCeeEEeccccCCCeEEEEEcCC
Q 010362 433 -SFSSGK-------REGGDFVAACVSPKGEWIYCVGE----------DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPH 494 (512)
Q Consensus 433 -~~~~~~-------~~~~~~~~~~~s~~g~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~ 494 (512)
.+.... ........++++++++.++.... .+.|.++|..+++.+..+... ..+.+++++||
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D 341 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQD 341 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSS
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCC
Confidence 221000 00112234677999999888753 257999999999999888643 36889999999
Q ss_pred CC-eEEEE-ECCCeEEEecC
Q 010362 495 RN-LLATY-GEDCTMKLWKP 512 (512)
Q Consensus 495 ~~-~l~s~-~~dg~i~iW~~ 512 (512)
++ +|+++ ..++.|.++|+
T Consensus 342 ~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 342 EKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp SSCEEEEEETTTTEEEEEET
T ss_pred CCeEEEEEcCCCCeEEEEEC
Confidence 86 66654 45899999985
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=6.9e-15 Score=136.92 Aligned_cols=255 Identities=15% Similarity=0.077 Sum_probs=178.3
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 293 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~ 293 (512)
.....+.+. +++.+++...++.|.+||..+++....+. .......++++++++..++...++.|.+||..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~---------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~ 113 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT---------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPK 113 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE---------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETT
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC---------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECC
Confidence 345677774 44555566668999999999988776552 34678899999998555544478999999999
Q ss_pred CCeeeEEeccccc----cCeEEEEEecCCCEEEEEe--CCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEe
Q 010362 294 SGQCLRRLERAHS----EGVTSLVFSRDGSQILSTS--FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 294 ~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~--~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
+++....+..+.. .....+++ . +..++++. .++.|.++|+.+++.+..+.... ....+.++|+|++++++.
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBC
T ss_pred CCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEEC
Confidence 9998777653221 14566777 3 45555555 48899999999998888776533 467899999998777665
Q ss_pred CC----------CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCC
Q 010362 368 SD----------CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSG 437 (512)
Q Consensus 368 ~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 437 (512)
.+ +.|.++|..+++....+..+. ......++++|++ ..++++.. .+.++|.....+......
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-----g~~p~~la~~~d~-~~lyv~~~--~v~~~d~~t~~~~~~~~~ 262 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-----GDWPSEVQLNGTR-DTLYWINN--DIWRMPVEADRVPVRPFL 262 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-----TCCCEEEEECTTS-CEEEEESS--SEEEEETTCSSCCSSCSB
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCC-----CCCceeEEEecCC-CEEEEEcc--EEEEEECCCCceeeeeee
Confidence 54 789999999988776654321 2357899999987 55555544 899999874433211111
Q ss_pred cccCCcEEEEEECCC-CCEEEEE----eCCCeEEEEEcCCCeeEEeccccCCCeEEEEE
Q 010362 438 KREGGDFVAACVSPK-GEWIYCV----GEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTH 491 (512)
Q Consensus 438 ~~~~~~~~~~~~s~~-g~~l~~g----~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~ 491 (512)
.........++++|+ +...++. ..++.|.+||.. ++.+..+.. ......++|
T Consensus 263 ~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 263 EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence 111345788999994 5555555 578999999998 888887763 233455555
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=5.2e-13 Score=122.49 Aligned_cols=238 Identities=13% Similarity=0.074 Sum_probs=172.8
Q ss_pred cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCcee
Q 010362 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 341 (512)
+...+.++++.++|++.++...++.|.+||.. +.............+.++++.+++..+++...++.|..||.. ++.
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~- 89 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII- 89 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-
Confidence 45679999999999977776668899999988 654332222345679999999999877777668889999975 433
Q ss_pred EEee--CCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC
Q 010362 342 KEFR--GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419 (512)
Q Consensus 342 ~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~ 419 (512)
..+. .....+.++++++++..+++...++.|..||. +++.... ..+ .....+..+++.+++ .++++...++
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~----~~~~~~~~i~~~~~g-~l~v~~~~~~ 162 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY-ELP----NKGSYPSFITLGSDN-ALWFTENQNN 162 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECS----STTCCEEEEEECTTS-CEEEEETTTT
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe-cCC----CCCCCCceEEEcCCC-CEEEEeCCCC
Confidence 3332 24456889999999988887777889999998 5543322 111 123467889999887 6777777788
Q ss_pred cEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEe-ccccCCCeEEEEEcCCCCeE
Q 010362 420 SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL-MKVHEKDVIGVTHHPHRNLL 498 (512)
Q Consensus 420 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l 498 (512)
.+..++..+... .+... .....+..++++++|++.++...++.|.+||. +++.... ...+...+.+++++++++++
T Consensus 163 ~i~~~~~~g~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 163 AIGRITESGDIT-EFKIP-TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLW 239 (299)
T ss_dssp EEEEECTTCCEE-EEECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred EEEEEcCCCcEE-EeeCC-CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEE
Confidence 999999954433 33221 12345788999999997777667889999999 6664432 33345678999999999977
Q ss_pred EEEECCCeEEEecC
Q 010362 499 ATYGEDCTMKLWKP 512 (512)
Q Consensus 499 ~s~~~dg~i~iW~~ 512 (512)
++...++.|..||+
T Consensus 240 v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 240 FTEWGANKIGRLTS 253 (299)
T ss_dssp EEETTTTEEEEEET
T ss_pred EeccCCceEEEECC
Confidence 77667888998875
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.67 E-value=5.7e-14 Score=130.06 Aligned_cols=241 Identities=11% Similarity=0.113 Sum_probs=167.2
Q ss_pred cCcceeEEEEcCCCCeEEE-------EeCCCeEEEEEccCCeeeEEec---cccccCeEEEEEecC-CCEEEEEeCCCcE
Q 010362 262 HDETVLCIEFSRDSEMLAS-------GSQDGKIKVWRIRSGQCLRRLE---RAHSEGVTSLVFSRD-GSQILSTSFDSTA 330 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s-------~~~dg~i~vwd~~~~~~~~~~~---~~~~~~i~~~~~~~~-~~~l~~~~~dg~v 330 (512)
.-....+++|++++.++++ +..++.|.+||..+++...... ..+...+.+++++++ +. +++++..+.|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l 94 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGL 94 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCE
Confidence 3345689999999988877 5778999999988887543221 014467899999999 65 4445545579
Q ss_pred EEEeCCCCceeEE-eeC----CccceeEEEEcCCCCEEEEEeCC---------------CcEEEEeCCCCceeeecCCCC
Q 010362 331 RIHGLKSGKLLKE-FRG----HSSYVNDAIFTNDGSRVVTASSD---------------CTVKVWDLKSTDCLQTFKPPP 390 (512)
Q Consensus 331 ~i~d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~~ 390 (512)
.+||.. ++.... ... ....+.+++++++|+.+++...+ +.|..||.. ++......
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--- 169 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--- 169 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE---
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc---
Confidence 999987 665432 221 12358899999999887776655 567777765 44322211
Q ss_pred CCCCCCceeEEEEEc----CCCCCeEEEEcCCCcEEEEecC--CeEE--EEeeCCcccC-CcEEEEEECCCCCEEEEEeC
Q 010362 391 PLRGGDASVNSVHLF----PKNPDHIVVCNKTSSIYIMTLQ--GQVV--KSFSSGKREG-GDFVAACVSPKGEWIYCVGE 461 (512)
Q Consensus 391 ~~~~~~~~i~~~~~~----~~~~~~l~~~~~~~~i~~~~~~--~~~~--~~~~~~~~~~-~~~~~~~~s~~g~~l~~g~~ 461 (512)
.......++++ |++..++++...++.|.+|+.. +... ..+....... .....++++++|++.++...
T Consensus 170 ----~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 170 ----AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp ----EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred ----CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 12245778888 8774455666678999999975 3211 1121111112 44678999999998888878
Q ss_pred CCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCC-eEEEEECCCeEEEecC
Q 010362 462 DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN-LLATYGEDCTMKLWKP 512 (512)
Q Consensus 462 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~~~dg~i~iW~~ 512 (512)
++.|.+||..+++.+..+..+...+.+++++|+++ ++++...++.|..|++
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 89999999987887777776777899999999999 4455556688888874
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.67 E-value=1.5e-14 Score=150.30 Aligned_cols=275 Identities=15% Similarity=0.123 Sum_probs=171.8
Q ss_pred CCCCEEEEEeCCCe---EEEEEcC-----CCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC-----CeEEE
Q 010362 223 PDGQFLVSCSFDGF---IEVWDYL-----SGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD-----GKIKV 289 (512)
Q Consensus 223 ~~~~~l~sg~~dg~---i~iwd~~-----~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~v 289 (512)
|+|++++....++. -.+|-.. .++...-+.. ...-.+|...+..++|||||++||.++.+ ..|++
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~--~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDP--NTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECG--GGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECH--HHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 78888776654432 4455433 2221111110 01112244578899999999999987654 36999
Q ss_pred EEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCc--------------EEEEeCCCCce--eEEee--CCccce
Q 010362 290 WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST--------------ARIHGLKSGKL--LKEFR--GHSSYV 351 (512)
Q Consensus 290 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--------------v~i~d~~~~~~--~~~~~--~~~~~v 351 (512)
||+.+++.+.... +...+..++|+|| +.|+.++.++. |++|++.++.. ...+. .+...+
T Consensus 194 ~dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 194 VGVADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp EETTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred EECCCCCCCCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 9999998765421 2223467899999 99998887654 89999977652 22233 233458
Q ss_pred eEEEEcCCCCEEEEEeCCC-----cEEEEeCCCC--ceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC---CCcE
Q 010362 352 NDAIFTNDGSRVVTASSDC-----TVKVWDLKST--DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK---TSSI 421 (512)
Q Consensus 352 ~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---~~~i 421 (512)
.++.|+|||++|+..+.++ .|.+||+.++ .+...+... ....... ++|++..+++.... ++.|
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~------~~~~~~~-~~~dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD------LKAQWDF-VDGVGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS------SSSCEEE-EEEETTEEEEEECTTCTTCEE
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC------CCceEEE-EeccCCEEEEEECCCCCCCEE
Confidence 8999999999988877544 7999999876 312333221 1122233 24777444444433 3459
Q ss_pred EEEecCC--eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC-CCeeEEecccc-CCCeEEEEEcCCCCe
Q 010362 422 YIMTLQG--QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ-SGKLEHLMKVH-EKDVIGVTHHPHRNL 497 (512)
Q Consensus 422 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~v~~~p~~~~ 497 (512)
.+|++.+ .....+.... ...+..++++ ++.++++...|+..++|.+. +++....+..+ .+.+..+.++|++..
T Consensus 344 ~~~d~~~~~~~~~~l~~~~--~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~ 420 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPES--KDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRH 420 (741)
T ss_dssp EEEECSSSSCEEEEEECCC--SSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSC
T ss_pred EEEeCCCCccccEEEecCC--CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCE
Confidence 9999885 3444444332 2345566776 66777888889887777554 45556666543 567889999998875
Q ss_pred EE-EEE---CCCeEEEecC
Q 010362 498 LA-TYG---EDCTMKLWKP 512 (512)
Q Consensus 498 l~-s~~---~dg~i~iW~~ 512 (512)
++ +.+ ..++|++||.
T Consensus 421 l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 421 AYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EEEEEEETTEEEEEEEEET
T ss_pred EEEEEcCCCCCCEEEEEEC
Confidence 55 332 3477888873
No 201
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.67 E-value=4.1e-14 Score=133.97 Aligned_cols=272 Identities=11% Similarity=0.087 Sum_probs=185.9
Q ss_pred CCCCEEEEEeC-C----CeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe----------CCCeE
Q 010362 223 PDGQFLVSCSF-D----GFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS----------QDGKI 287 (512)
Q Consensus 223 ~~~~~l~sg~~-d----g~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----------~dg~i 287 (512)
++++.+++... + +.|.++|..+++....+.. ...+ .++++||+++++++. .++.|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v--------G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~V 151 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG--------GFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYV 151 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE--------CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC--------CCCC--ceEECCCCCEEEEEeccccccccCCCCCEE
Confidence 35665555543 2 6999999999998876653 2334 899999999988876 36789
Q ss_pred EEEEccCCeeeEEeccc------cccCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeEEeeCCccceeEEEEcCC
Q 010362 288 KVWRIRSGQCLRRLERA------HSEGVTSLVFSRDGSQILSTSF--DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND 359 (512)
Q Consensus 288 ~vwd~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 359 (512)
.++|..+++.+..+..+ .......+.|+|||++++++.. ++.|.+.|+.+++.+.++..... ....|+
T Consensus 152 sviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~ 227 (426)
T 3c75_H 152 EVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPA 227 (426)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEE
T ss_pred EEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccC
Confidence 99999999988887532 1234567899999999999874 57899999999999888774221 223343
Q ss_pred C-CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCce-eEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeC-
Q 010362 360 G-SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS-VNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS- 436 (512)
Q Consensus 360 ~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~- 436 (512)
+ ..+++.+.||.+.+.+..+++...... ........+ ...+.+.+++ ..++.....+.+.+.|..+........
T Consensus 228 g~~~~v~~~~dG~~~~V~~~~~~v~~~~~--~~~~v~~~p~~~~~~~~~dg-~~~~~~s~~g~V~ViD~~~~~~~v~~~~ 304 (426)
T 3c75_H 228 SPTVFYMNCRDGSLARVDFADGETKVTNT--EVFHTEDELLINHPAFSLRS-GRLVWPTYTGKIFQADLTAEGATFRAPI 304 (426)
T ss_dssp ETTEEEEEETTSSEEEEECCTTCCEEEEC--CCCSCTTSCBCSCCEECTTT-CEEEEEBTTSEEEEEEECSSCEEECCCE
T ss_pred CCcEEEEEcCCCCEEEEECCCCcEEEEee--eeeccCCCceeeEeeecCCC-CEEEEEeCCCcEEEEeccCCceEEeeee
Confidence 3 566777778888888886555442211 000001111 1224567776 444444567899999987543332211
Q ss_pred --C--c--cc---CCcEEEEEECCCCCEEEEEeC----------CCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCC-
Q 010362 437 --G--K--RE---GGDFVAACVSPKGEWIYCVGE----------DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN- 496 (512)
Q Consensus 437 --~--~--~~---~~~~~~~~~s~~g~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~- 496 (512)
. . .. ......++++|+++.+++... .+.|.++|..+.+.+..+... ....++.|+||++
T Consensus 305 ~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~ 383 (426)
T 3c75_H 305 EALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEP 383 (426)
T ss_dssp ESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSC
T ss_pred eeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCE
Confidence 0 0 00 011113689999998887753 357999999999999988643 3578999999998
Q ss_pred eEEEEE-CCCeEEEecC
Q 010362 497 LLATYG-EDCTMKLWKP 512 (512)
Q Consensus 497 ~l~s~~-~dg~i~iW~~ 512 (512)
+++++. .++.|.++|+
T Consensus 384 ~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 384 LLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred EEEEEcCCCCeEEEEEC
Confidence 888887 5999999985
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=1.5e-14 Score=150.13 Aligned_cols=245 Identities=14% Similarity=0.118 Sum_probs=164.6
Q ss_pred cCcCceEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFD-----GFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
+|...+..++|||||++||.++.+ ..|++||+.+++..... .+...+..++|+|| +.|+.++.++
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~---------~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE---------LKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE---------EEEEESCCCEESTT-SEEEEEECCC
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc---------CCCceeccEEEECC-CEEEEEEecC
Confidence 344468899999999999987644 36999999998764321 02223467899999 9999888765
Q ss_pred e--------------EEEEEccCCee--eEEec-cccccCeEEEEEecCCCEEEEEeCCC-----cEEEEeCCCC--cee
Q 010362 286 K--------------IKVWRIRSGQC--LRRLE-RAHSEGVTSLVFSRDGSQILSTSFDS-----TARIHGLKSG--KLL 341 (512)
Q Consensus 286 ~--------------i~vwd~~~~~~--~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~i~d~~~~--~~~ 341 (512)
. |++|++.++.. ...+. ..+...+..+.|+|||++|+..+.++ .|++||+.++ +..
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 4 89999977652 22222 12233588999999999998877544 7999999876 414
Q ss_pred EEeeCCccceeEEEEcCCCCEEEEEeCC----CcEEEEeCCCCc-eeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc
Q 010362 342 KEFRGHSSYVNDAIFTNDGSRVVTASSD----CTVKVWDLKSTD-CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 416 (512)
Q Consensus 342 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 416 (512)
..+..+...+... ++|+|+.|+..+.+ +.|.+||+.++. ....+.+. +...+.++.+. +..++++..
T Consensus 310 ~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~-----~~~~l~~~~~~--~~~lv~~~~ 381 (741)
T 1yr2_A 310 TALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE-----SKDNLESVGIA--GNRLFASYI 381 (741)
T ss_dssp EEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC-----CSSEEEEEEEE--BTEEEEEEE
T ss_pred EEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC-----CCCeEEEEEEE--CCEEEEEEE
Confidence 5555555445444 34888888877753 459999988752 22332221 23356667776 436778888
Q ss_pred CCCcEEEEec--CCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe----CCCeEEEEEcCCCee
Q 010362 417 KTSSIYIMTL--QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG----EDRNLYCFSHQSGKL 475 (512)
Q Consensus 417 ~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~----~dg~i~iwd~~~~~~ 475 (512)
.++...+|.+ .+.....+... ..+.+..+.++|+++.++... ..+.|+.||+.+++.
T Consensus 382 ~dg~~~l~~~~~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 382 HDAKSQVLAFDLDGKPAGAVSLP--GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp ETTEEEEEEEETTSCEEEECBCS--SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred ECCEEEEEEEeCCCCceeeccCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 8887666654 46655554321 235577889999988666332 457899999988774
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.64 E-value=4.5e-13 Score=128.24 Aligned_cols=242 Identities=11% Similarity=0.089 Sum_probs=172.5
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCC--cEEEEeCCCCcee
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS--TARIHGLKSGKLL 341 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~v~i~d~~~~~~~ 341 (512)
.....|+|+++++++++...++.|++||..++....... . ..... ++|+|+++.++++..++ .|..++...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~-~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP-G-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE-T-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec-c-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 467899999999977777778999999998887655443 2 22333 99999999999988866 7999998766544
Q ss_pred EEe----eCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCce--eEEEEEcCCCCCeEEEE
Q 010362 342 KEF----RGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDAS--VNSVHLFPKNPDHIVVC 415 (512)
Q Consensus 342 ~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~l~~~ 415 (512)
..+ ......+.+++++|++..|+.+..++.|+.||..++.... +..... .+.... ...++++|.+..++++.
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~-~~~~~~-~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL-IKQLEL-SGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE-EEECCC-CSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE-Eecccc-cCCCCCCccccEEEeCCCCEEEEEe
Confidence 444 2244568899999955566667778899999998765322 210000 011111 23899999766788888
Q ss_pred cCCCcEEEEecCCeEEEEeeCC-c----------ccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEecccc-
Q 010362 416 NKTSSIYIMTLQGQVVKSFSSG-K----------REGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVH- 482 (512)
Q Consensus 416 ~~~~~i~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h- 482 (512)
..++.|+.|+.++......... . ..-.....++++++|+++++-. .++.|+.|+..++.... +.++
T Consensus 286 ~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~-~~g~~ 364 (409)
T 3hrp_A 286 QNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST-VAGQV 364 (409)
T ss_dssp TTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE-EEECT
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE-EeCCC
Confidence 8889999999987633322211 0 0013467899999999777777 88999999988887543 3333
Q ss_pred --------------CCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 483 --------------EKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 483 --------------~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
-.....++++|++.++++-..+++|+.+.
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 24588999999998888888888998765
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.62 E-value=6.4e-13 Score=123.47 Aligned_cols=289 Identities=15% Similarity=0.175 Sum_probs=188.7
Q ss_pred ccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEe----------CCCeEEEEEcCCCeeeccccccccceeec
Q 010362 192 MKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS----------FDGFIEVWDYLSGKLKKDLQYQADETFMM 261 (512)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 261 (512)
....+.|....+...++..+... . ++++|||+++++++ .++.|.+||..+.+....+........ .
T Consensus 59 ~~V~ViD~~t~~v~~~I~vG~~P--~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~-~ 134 (386)
T 3sjl_D 59 TQQFVIDGEAGRVIGMIDGGFLP--N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRF-L 134 (386)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC-C
T ss_pred CEEEEEECCCCeEEEEEECCCCC--c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccc-c
Confidence 35566777778888888866553 3 99999999888775 367899999999988776643210000 0
Q ss_pred cCcceeEEEEcCCCCeEEEEeC--CCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-C
Q 010362 262 HDETVLCIEFSRDSEMLASGSQ--DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS-G 338 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~-~ 338 (512)
.......++++|||++++++.. ++.|.++|+.+++.+.++... + . ...+....+.+++.+.||.+.+.++.+ +
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEG 210 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E-EEEEEEETTEEEEEETTSCEEEEECCSSS
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c-ceeecCCCceeEEECCCCCEEEEECCCCC
Confidence 1234567999999999988864 689999999999999888532 1 1 223333456777888899999999876 5
Q ss_pred ceeEEeeCC----ccce-eEEEEc-CCCCEEEEEeCCCcEEEEeCCCCce--eeecCCCCC----CCCCCceeEEEEEcC
Q 010362 339 KLLKEFRGH----SSYV-NDAIFT-NDGSRVVTASSDCTVKVWDLKSTDC--LQTFKPPPP----LRGGDASVNSVHLFP 406 (512)
Q Consensus 339 ~~~~~~~~~----~~~v-~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~----~~~~~~~i~~~~~~~ 406 (512)
+.......+ ..++ ....|. ++|++++ .+.+|.|.+.|+.+... ...+..... ..-.......+.++|
T Consensus 211 ~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~ 289 (386)
T 3sjl_D 211 TPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR 289 (386)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEET
T ss_pred eEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECC
Confidence 543322111 1122 124564 5775544 56689999999976542 222210000 000011223466678
Q ss_pred CCCCeEEEEcC---------CCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCC-EEEEEe-CCCeEEEEEcCCCe
Q 010362 407 KNPDHIVVCNK---------TSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGE-WIYCVG-EDRNLYCFSHQSGK 474 (512)
Q Consensus 407 ~~~~~l~~~~~---------~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~-~dg~i~iwd~~~~~ 474 (512)
++..++++... ...|.++|.. .+.+..+..+. .+..+.+++|++ +|++.. .++.|.++|..+++
T Consensus 290 ~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 290 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 77555554331 2569999998 45555555432 467899999997 777765 58999999999999
Q ss_pred eEEeccccCCCeEEEEEcCC
Q 010362 475 LEHLMKVHEKDVIGVTHHPH 494 (512)
Q Consensus 475 ~~~~~~~h~~~v~~v~~~p~ 494 (512)
.+..+... +..+.+.+++|
T Consensus 366 ~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 366 ELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EEEEECCC-CSSCCEEEECC
T ss_pred EEEEecCC-CCCceeEECCc
Confidence 99888643 33445666665
No 205
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=4.9e-13 Score=121.96 Aligned_cols=199 Identities=16% Similarity=0.206 Sum_probs=151.3
Q ss_pred ccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeC------CccceeEEEE-cCCCCEEEEEeC-CCcEEEE
Q 010362 304 AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG------HSSYVNDAIF-TNDGSRVVTASS-DCTVKVW 375 (512)
Q Consensus 304 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~------~~~~v~~~~~-~~~~~~l~~~~~-dg~i~iw 375 (512)
++-..+.++++++++..+++.+.++.|.+||.. ++.+..+.. +...+.++++ .++++.+++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 345678999999999988888889999999986 666666642 3356889999 467766665543 7899999
Q ss_pred eCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCE
Q 010362 376 DLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEW 455 (512)
Q Consensus 376 d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 455 (512)
| .+++....+... ....+.++++.|++ .++++...++.|.+|+..+.....+... .....+..++++++|++
T Consensus 106 d-~~g~~~~~~~~~-----~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~~~~~~~~-~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 106 N-QYGQFVRKFGAT-----ILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGNVLHKFGCS-KHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp C-TTSCEEEEECTT-----TCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSCEEEEEECT-TTCSSEEEEEECSSSEE
T ss_pred C-CCCcEEEEecCc-----cCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCCCEEEEeCCC-CccCCcEEEEECCCCCE
Confidence 9 566666555321 23467899999987 6777778889999999888776665432 12345789999999998
Q ss_pred EEEEeCCCeEEEEEcCCCeeEEecccc--CCCeEEEEEcCCCCeEEEEECCC-eEEEecC
Q 010362 456 IYCVGEDRNLYCFSHQSGKLEHLMKVH--EKDVIGVTHHPHRNLLATYGEDC-TMKLWKP 512 (512)
Q Consensus 456 l~~g~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~v~~~p~~~~l~s~~~dg-~i~iW~~ 512 (512)
+++...++.|++||. +++.+..+..+ ...+.+++++|+++++++...++ .|.+|++
T Consensus 178 ~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 178 FISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp EEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred EEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 888788999999997 45555555433 36789999999999988888786 9999985
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.61 E-value=1e-11 Score=117.11 Aligned_cols=270 Identities=12% Similarity=0.030 Sum_probs=177.7
Q ss_pred ccccccCccccceEEEecCcCceEEEEECCCCCEEEEEe----------CCCeEEEEEcCCCeeecccccc-ccceeecc
Q 010362 194 QDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS----------FDGFIEVWDYLSGKLKKDLQYQ-ADETFMMH 262 (512)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~----------~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~h 262 (512)
..+.|....+...++..+.. + .++|||||++++++. .++.|.+||..+.+....+... ..... +
T Consensus 49 v~v~D~~t~~~~~~i~~g~~-p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~--~ 123 (373)
T 2mad_H 49 QWVLDAGSGSILGHVNGGFL-P--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFD--V 123 (373)
T ss_pred EEEEECCCCeEEEEecCCCC-C--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccc--c
Confidence 34555556666667764432 2 899999999999886 3678999999888776655432 11110 1
Q ss_pred CcceeEEEEcCCCCeEEEEeC--CCeEEEEEccCCeeeEE-eccccccCeEEEEEecCC-CEEEEEeCCCcEEEEeCCCC
Q 010362 263 DETVLCIEFSRDSEMLASGSQ--DGKIKVWRIRSGQCLRR-LERAHSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKSG 338 (512)
Q Consensus 263 ~~~v~~l~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~i~d~~~~ 338 (512)
......++|+|||++|++++. ++.|.++| .+++.+.. +. ... ++.+.|++ ..+++.+.||.+.++|. ++
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~--~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS--SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC--CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 133568999999999998874 47899999 99998877 64 222 24455654 45567778999999999 88
Q ss_pred ceeEEee-----CCccc-eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eeeecCCCCC----CCCCCceeEEEEEcC
Q 010362 339 KLLKEFR-----GHSSY-VNDAIFTNDGSRVVTASSDCTVKVWDLKSTD--CLQTFKPPPP----LRGGDASVNSVHLFP 406 (512)
Q Consensus 339 ~~~~~~~-----~~~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~----~~~~~~~i~~~~~~~ 406 (512)
+...... ....+ .....+.+++..++..+.++.+.+.|+.+.. ....+..... ..-.......+.++|
T Consensus 197 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~ 276 (373)
T 2mad_H 197 GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK 276 (373)
T ss_pred cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC
Confidence 7764322 11112 1234566666655555578899999987553 2222211100 000112234477888
Q ss_pred CCCCeEEEEc---------CCCcEEEEecCC-eEEEEeeCCcccCCcEEEEEECCCCC-EEEEEe-CCCeEEEEEcCCCe
Q 010362 407 KNPDHIVVCN---------KTSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGE-WIYCVG-EDRNLYCFSHQSGK 474 (512)
Q Consensus 407 ~~~~~l~~~~---------~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~-~dg~i~iwd~~~~~ 474 (512)
++..++++.. ..+.|.++|... +.+..+... .....+.|+|||+ .++++. .++.|.++|..+++
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g----~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG----HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC----CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 8855555543 245799999984 444555432 2467899999999 777777 58999999999999
Q ss_pred eEEec
Q 010362 475 LEHLM 479 (512)
Q Consensus 475 ~~~~~ 479 (512)
.+..+
T Consensus 353 vv~~i 357 (373)
T 2mad_H 353 QDQST 357 (373)
T ss_pred EEeee
Confidence 98874
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=1e-11 Score=113.87 Aligned_cols=239 Identities=12% Similarity=0.053 Sum_probs=172.4
Q ss_pred cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCcee
Q 010362 262 HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL 341 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 341 (512)
....+.++++.++|++.++...++.|.+||.. ++............+.++++.+++..+++...++.|..+|.. ++..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE
Confidence 34678899999999988777678999999987 654432221234678999999999877776667889999987 5543
Q ss_pred E-EeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCc
Q 010362 342 K-EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 420 (512)
Q Consensus 342 ~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~ 420 (512)
. ........+.++++.++++.+++...++.|..||.. ++... +..+ .....+.++++.+++ .++++...++.
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~----~~~~~~~~i~~d~~g-~l~v~~~~~~~ 168 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLP----NKGSYPAFITLGSDN-ALWFTENQNNS 168 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EECS----STTCCEEEEEECTTS-SEEEEETTTTE
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCC----CCCCCceeEEECCCC-CEEEEecCCCe
Confidence 2 222234568899999999888777768899999987 55432 2111 123467889999887 56666667889
Q ss_pred EEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEe-ccccCCCeEEEEEcCCCCeEE
Q 010362 421 IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHL-MKVHEKDVIGVTHHPHRNLLA 499 (512)
Q Consensus 421 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~ 499 (512)
|..++..+.... +.. ......+..++++++|++.++....+.|.+||. +++.... +..+...+.++++++++++++
T Consensus 169 i~~~~~~g~~~~-~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v 245 (300)
T 2qc5_A 169 IGRITNTGKLEE-YPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWF 245 (300)
T ss_dssp EEEECTTCCEEE-EEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred EEEECCCCcEEE-eeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEE
Confidence 999998655443 322 122345789999999987777767788999998 5554432 334456789999999998777
Q ss_pred EEECCCeEEEecC
Q 010362 500 TYGEDCTMKLWKP 512 (512)
Q Consensus 500 s~~~dg~i~iW~~ 512 (512)
+...++.|..|++
T Consensus 246 ~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 246 TEWGANQIGRITN 258 (300)
T ss_dssp EETTTTEEEEECT
T ss_pred eccCCCeEEEECC
Confidence 7666788998875
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.58 E-value=3.8e-14 Score=132.28 Aligned_cols=184 Identities=12% Similarity=0.072 Sum_probs=137.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeecc---ccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEE
Q 010362 215 HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKD---LQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWR 291 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~---~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd 291 (512)
.+..+++++...++++|+.++ +++|+++....... ..+.+. ....+.. |+.++| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~-~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFK-WEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCS-EEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccce-EEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 588999999999999999875 66698754431000 001111 1223666 999999 89999999 889999999
Q ss_pred ccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCc
Q 010362 292 IRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCT 371 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 371 (512)
+.+........ .+..++.++.+.+. .+++++.||.+.+||+.++.... +...|+|++|+|+| ++.|..||+
T Consensus 113 v~sl~~~~~~~-~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 113 LEELSEFRTVT-SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp SSSTTCEEEEE-ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSC
T ss_pred chhhhccCccc-eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCc
Confidence 98766544444 56777888877654 38889999999999998877643 44579999999999 788999999
Q ss_pred EEEEeCCCCce--eeecCCCCCCC---CCCceeEEEEEcCCCCCeEEE
Q 010362 372 VKVWDLKSTDC--LQTFKPPPPLR---GGDASVNSVHLFPKNPDHIVV 414 (512)
Q Consensus 372 i~iwd~~~~~~--~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~ 414 (512)
+++|+...+.. ..++..+..+. ++...|.++.|.+++ .++++
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~ 230 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAV 230 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC-eEEEE
Confidence 99999888775 55665554333 367899999999976 44444
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.58 E-value=3e-12 Score=117.32 Aligned_cols=227 Identities=12% Similarity=0.084 Sum_probs=156.0
Q ss_pred cceeEEEEcCCC-CeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeE
Q 010362 264 ETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLK 342 (512)
Q Consensus 264 ~~v~~l~~s~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~ 342 (512)
.-.-+..|+|++ .++++...++.|..||..++.. ..+ .....+.+++++++|++++ +. ++.|.+||..+++...
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~--~~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV--TMDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE--ECSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE--eCCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEE
Confidence 345688899965 4555656688999999988765 333 2457799999999999544 44 5689999998776543
Q ss_pred EeeC----CccceeEEEEcCCCCEEEEEeCC---------CcEEEEeCCC-CceeeecCCCCCCCCCCceeEEEEEcCCC
Q 010362 343 EFRG----HSSYVNDAIFTNDGSRVVTASSD---------CTVKVWDLKS-TDCLQTFKPPPPLRGGDASVNSVHLFPKN 408 (512)
Q Consensus 343 ~~~~----~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 408 (512)
.... ....+++++++|+|+++++...+ ..-.+|.+.. ++..... ......+.++|+|++
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~-------~~~~~pngi~~spdg 160 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF-------DQVDISNGLDWSLDH 160 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-------EEESBEEEEEECTTS
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-------eccccccceEEcCCC
Confidence 3222 12357899999999976654321 2234444432 2222211 112346789999998
Q ss_pred CCeEEEEcCCCcEEEEecC---CeE--EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccC
Q 010362 409 PDHIVVCNKTSSIYIMTLQ---GQV--VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHE 483 (512)
Q Consensus 409 ~~~l~~~~~~~~i~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~ 483 (512)
..++++.+.++.|..|++. +.. ...+............++++++|++.++...++.|..||..+++.+..+..+.
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 6667777888999999873 222 12222222223456789999999888777788899999999999998888887
Q ss_pred CCeEEEEEc-CCCCeEEEEE
Q 010362 484 KDVIGVTHH-PHRNLLATYG 502 (512)
Q Consensus 484 ~~v~~v~~~-p~~~~l~s~~ 502 (512)
..+++++|. |+++.|..++
T Consensus 241 ~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 241 DKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp SBEEEEEEESGGGCEEEEEE
T ss_pred CCceEEEEeCCCCCEEEEEc
Confidence 889999998 7877554443
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=3.5e-12 Score=117.97 Aligned_cols=246 Identities=14% Similarity=0.162 Sum_probs=165.7
Q ss_pred CcCceEEEEECCCCCEEEE-------EeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC-CCeEEEEeC
Q 010362 212 TKSHAECARFSPDGQFLVS-------CSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD-SEMLASGSQ 283 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~s-------g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~-~~~l~s~~~ 283 (512)
.-....+++|+++|+++++ +..++.|.+||..+++...... ....++...+.+++++++ ++++++. .
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~----~~~~~~~~~~~~i~~~~~~g~l~v~~-~ 90 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK----PEVNGYGGIPAGCQCDRDANQLFVAD-M 90 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC----CEETTEECCEEEEEECSSSSEEEEEE-T
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe----cccCCCCCCCceEEEecCCCcEEEEE-C
Confidence 3445789999999998888 6778999999987776532110 011124467899999999 6655544 4
Q ss_pred CCeEEEEEccCCeeeEE-ecc---ccccCeEEEEEecCCCEEEEEeCC---------------CcEEEEeCCCCceeEEe
Q 010362 284 DGKIKVWRIRSGQCLRR-LER---AHSEGVTSLVFSRDGSQILSTSFD---------------STARIHGLKSGKLLKEF 344 (512)
Q Consensus 284 dg~i~vwd~~~~~~~~~-~~~---~~~~~i~~~~~~~~~~~l~~~~~d---------------g~v~i~d~~~~~~~~~~ 344 (512)
.+.|.+||.. ++.... ... .....+.+++++++|+.+++...+ +.|..+|.. ++....
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~- 167 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV- 167 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-
Confidence 4579999988 765432 211 112458899999999877776654 567788765 544332
Q ss_pred eCCccceeEEEEc----CCCCEEEEE-eCCCcEEEEeCC-CCcee--eecCCCCCCCCCC-ceeEEEEEcCCCCCeEEEE
Q 010362 345 RGHSSYVNDAIFT----NDGSRVVTA-SSDCTVKVWDLK-STDCL--QTFKPPPPLRGGD-ASVNSVHLFPKNPDHIVVC 415 (512)
Q Consensus 345 ~~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~iwd~~-~~~~~--~~~~~~~~~~~~~-~~i~~~~~~~~~~~~l~~~ 415 (512)
..+......++++ |+++.++.+ ..++.|.+||.. ++... ..+.. ...+. ..+..+++.+++ .++++.
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~---~~~~~~~~p~~i~~d~~G-~l~v~~ 243 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH---IPGTHEGGADGMDFDEDN-NLLVAN 243 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE---CCCCSSCEEEEEEEBTTC-CEEEEE
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE---CCCCCCCCCCceEECCCC-CEEEEE
Confidence 2333456889999 999766555 467899999976 34311 11110 11222 467889999987 777777
Q ss_pred cCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCC
Q 010362 416 NKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQS 472 (512)
Q Consensus 416 ~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~ 472 (512)
..++.|..|+.. +.....+... ...+.+++++|+|+.|++++ .++.|..|+...
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRCP---FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEECS---SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCEEEEEcCCCCcEeEEEeCC---CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 788899999998 5544444332 24588999999999666554 668999999864
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=6.5e-13 Score=124.46 Aligned_cols=267 Identities=14% Similarity=0.099 Sum_probs=174.1
Q ss_pred CceEEEEECCCCCEEEEEe--CCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC-----CCe
Q 010362 214 SHAECARFSPDGQFLVSCS--FDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ-----DGK 286 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-----dg~ 286 (512)
..+..++++|+|+++++.. .++.+.||.+.+++.. .+... .....+|-..+.+++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~-~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQ-SGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCC-CSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCc-ccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6788999999999988864 2343566665555433 11100 0112235678999999999876665433 578
Q ss_pred EEEEEccCCeeeEEeccc-----cccCeEEEEEecCCCEEEEE-e---CCCcEEEEeCCCCceeEEeeCCcccee-EEEE
Q 010362 287 IKVWRIRSGQCLRRLERA-----HSEGVTSLVFSRDGSQILST-S---FDSTARIHGLKSGKLLKEFRGHSSYVN-DAIF 356 (512)
Q Consensus 287 i~vwd~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~-~---~dg~v~i~d~~~~~~~~~~~~~~~~v~-~~~~ 356 (512)
|.+||+.+++.+..+... +...+..+++++++..++.+ . .++.|.+||+.+++....+.+|..... ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999999877666421 12356899999865555444 4 578999999988887776655432111 1344
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC-CCcEEEEecC---C-e--
Q 010362 357 TNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK-TSSIYIMTLQ---G-Q-- 429 (512)
Q Consensus 357 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-~~~i~~~~~~---~-~-- 429 (512)
.++|..+.+.+.+|.++.|. ..+..++++|++ ..++++.. ...++.++.. . .
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~--------------------~~~~gia~s~dg-~~ly~~~~~~~~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPH--------------------LGVNGIVLDAEN-EWLYLSPMHSTSMYRIKSADLSNLQLT 233 (343)
T ss_dssp EETTEECBEECTTSCEECCC--------------------CCEEEEEECTTS-CEEEEEESSCSEEEEEEHHHHTCTTCC
T ss_pred eECCEEEEeccCCCceecee--------------------cccceeEeccCC-CEEEEEeCCCCeEEEEEHHHhcCCCCC
Confidence 55676677777777765543 135789999988 45555444 4466666532 1 0
Q ss_pred ------EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccc-cCCCeEEEEEcCCCCeEEEEE
Q 010362 430 ------VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV-HEKDVIGVTHHPHRNLLATYG 502 (512)
Q Consensus 430 ------~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~~ 502 (512)
.+... ...+....++++++|++.++...++.|.+||..+++....... +...+.++++.+++.++++.+
T Consensus 234 ~~~~~~~~~~~----g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 234 DAELGSKIERY----SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp HHHHHTTCEEE----EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred hhhhhcceEec----ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 00000 0112345689999999999988999999999866765443332 245688999999998888876
Q ss_pred CCCeE
Q 010362 503 EDCTM 507 (512)
Q Consensus 503 ~dg~i 507 (512)
..+.+
T Consensus 310 ~~~~~ 314 (343)
T 2qe8_A 310 QLHHS 314 (343)
T ss_dssp CGGGS
T ss_pred ccccc
Confidence 54433
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=1.1e-11 Score=118.45 Aligned_cols=244 Identities=10% Similarity=0.023 Sum_probs=165.3
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC--eEEEEE
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG--KIKVWR 291 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg--~i~vwd 291 (512)
.....++|+|+|+++++...++.|++||..++....... ...... ++|+|+++.|++++.++ .|.+|+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~---------~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP---------GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE---------TCCBCB-CEECTTSSEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec---------cCCCCc-eeEecCCCcEEEEecCCCceEEEEE
Confidence 467899999999988888888999999998776543221 122233 99999999999888766 799999
Q ss_pred ccCCeeeEEe---ccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEE----eeCCccce--eEEEEcCC-CC
Q 010362 292 IRSGQCLRRL---ERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE----FRGHSSYV--NDAIFTND-GS 361 (512)
Q Consensus 292 ~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~----~~~~~~~v--~~~~~~~~-~~ 361 (512)
..++.....+ .......+.+++++|++..|+++..++.|+.||..++..... ..++...- ..++|+|+ +.
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 8766543333 112446678999999655666677788999999987754322 22222222 38999995 55
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeecCCCCCCC---------CCCceeEEEEEcCCCCCeEEEEc-CCCcEEEEecCCeEE
Q 010362 362 RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR---------GGDASVNSVHLFPKNPDHIVVCN-KTSSIYIMTLQGQVV 431 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~~~~-~~~~i~~~~~~~~~~ 431 (512)
.+++-..++.|+.|+.... . ..+....... ..-.....+++.|++ .++++-. .++.|+.|+.....+
T Consensus 281 lyv~d~~~~~I~~~~~~g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEEEETTTTEEEEECTTCC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEETTTTEE
T ss_pred EEEEeCCCCEEEEEecCCC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEECCCCEE
Confidence 5566666788999997643 1 1111110000 012347899999987 5777777 889999999654444
Q ss_pred EEeeCCc-c-----------cCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q 010362 432 KSFSSGK-R-----------EGGDFVAACVSPKGEWIYCVGEDRNLYCFSH 470 (512)
Q Consensus 432 ~~~~~~~-~-----------~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~ 470 (512)
..+.... . .-.....++++++|.++++-..++.|+.+++
T Consensus 358 ~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 358 STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 4333220 0 0134788999999888888888888888765
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=3e-13 Score=126.28 Aligned_cols=175 Identities=17% Similarity=0.231 Sum_probs=134.3
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCe---------eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEe
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ---------CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHG 334 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d 334 (512)
.+++.+++++...++++|+.+ .+.+|++.+.. ........+.. |+.++| |++.|+++ .++.|++||
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 368999999999999999987 56669876443 11101113556 999999 88999998 789999999
Q ss_pred CCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEE
Q 010362 335 LKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 414 (512)
Q Consensus 335 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 414 (512)
+++.........|...+.++.+.+. .+++++.||.|.+||+.++.....
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~----------------------------- 161 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL----------------------------- 161 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE-----------------------------
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccc-----------------------------
Confidence 9887766667777778888777654 388888899999999886542110
Q ss_pred EcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCee--EEec------c---ccC
Q 010362 415 CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKL--EHLM------K---VHE 483 (512)
Q Consensus 415 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~--~~~~------~---~h~ 483 (512)
...+.++||||+| ++.|..||.+++|+...++. ..++ . +|.
T Consensus 162 --------------------------~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~ 213 (388)
T 1xip_A 162 --------------------------AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEE 213 (388)
T ss_dssp --------------------------EESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTT
T ss_pred --------------------------cCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCC
Confidence 1238899999999 67899999999999888775 5555 2 367
Q ss_pred CCeEEEEEcCCCCeEEEEE
Q 010362 484 KDVIGVTHHPHRNLLATYG 502 (512)
Q Consensus 484 ~~v~~v~~~p~~~~l~s~~ 502 (512)
..|.+|.|.+++.++++-+
T Consensus 214 ~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 214 YSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp SEEEEEEESSSSEEEEEEE
T ss_pred eeEEEEEEecCCeEEEEEc
Confidence 8899999999999888754
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.53 E-value=6.7e-12 Score=118.87 Aligned_cols=275 Identities=13% Similarity=0.137 Sum_probs=185.8
Q ss_pred ccccccccCccccceEEEecCcCceEEEEECCCCCEEEEEe----------CCCeEEEEEcCCCeeeccccccccceeec
Q 010362 192 MKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS----------FDGFIEVWDYLSGKLKKDLQYQADETFMM 261 (512)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 261 (512)
....+.|....+...++..+.. + .++++|||++++++. .++.|.++|..+++....+.......+.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~- 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL- 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC-
T ss_pred CeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc-
Confidence 3556677778888888887754 3 899999999888876 3679999999999887765432000000
Q ss_pred cCcceeEEEEcCCCCeEEEEeC--CCeEEEEEccCCeeeEEeccccccCeEEEEEecCC-CEEEEEeCCCcEEEEeCCCC
Q 010362 262 HDETVLCIEFSRDSEMLASGSQ--DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKSG 338 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~i~d~~~~ 338 (512)
.......++++|||++++++.. ++.|.+.|+.+++.+.++..+. . ....|++ ..+++.+.||.+.+.+..++
T Consensus 175 ~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g---~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~ 249 (426)
T 3c75_H 175 VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD---C--YHIFPASPTVFYMNCRDGSLARVDFADG 249 (426)
T ss_dssp BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---E--EEEEEEETTEEEEEETTSSEEEEECCTT
T ss_pred cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC---c--eeeccCCCcEEEEEcCCCCEEEEECCCC
Confidence 1233567899999999999874 5789999999999988886322 1 2334433 56667777888888888666
Q ss_pred ceeEE----eeCCccc-eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee--eecCCC--CCCC--CCCceeEEEEEcCC
Q 010362 339 KLLKE----FRGHSSY-VNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL--QTFKPP--PPLR--GGDASVNSVHLFPK 407 (512)
Q Consensus 339 ~~~~~----~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~--~~~~--~~~~~i~~~~~~~~ 407 (512)
+.... +.....+ ...+.+.+++..++..+..+.+.+.|....... ..+... .... ........+.++|+
T Consensus 250 ~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d 329 (426)
T 3c75_H 250 ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ 329 (426)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG
T ss_pred cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCC
Confidence 55432 1111112 123567899888888788899999998765422 111100 0000 00111223678888
Q ss_pred CCCeEEEEcC---------CCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCC-EEEEEe-CCCeEEEEEcCCCee
Q 010362 408 NPDHIVVCNK---------TSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGE-WIYCVG-EDRNLYCFSHQSGKL 475 (512)
Q Consensus 408 ~~~~l~~~~~---------~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~-~dg~i~iwd~~~~~~ 475 (512)
+..++++... ++.|.++|.. .+.+..+..+. ....+.++|||+ ++++.. .++.|.++|..+++.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH----EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 7555555431 3579999998 45555554332 367899999999 888888 599999999999999
Q ss_pred EEec
Q 010362 476 EHLM 479 (512)
Q Consensus 476 ~~~~ 479 (512)
+..+
T Consensus 406 v~tI 409 (426)
T 3c75_H 406 LRSV 409 (426)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9886
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.52 E-value=2.1e-12 Score=132.86 Aligned_cols=244 Identities=15% Similarity=0.118 Sum_probs=161.7
Q ss_pred cCcCceEEEEECCCCCEEEEEe-----CCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 211 GTKSHAECARFSPDGQFLVSCS-----FDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
+|...+..++|||||++||.+. .+..|++||+.+++.... .+ +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-------~~--~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-------PL--KDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-------EE--EEEESCCCEEE-TTTEEEEEESSC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-------cc--CCceeccEEEe-CCCEEEEEEecC
Confidence 4556788999999999998543 335799999999875432 01 11123578899 999999988774
Q ss_pred e-------------EEEEEccCCee--eEEecc-c-cccCeEEEEEecCCCEEEEEeC----CCcEEEEeCCCCc-eeEE
Q 010362 286 K-------------IKVWRIRSGQC--LRRLER-A-HSEGVTSLVFSRDGSQILSTSF----DSTARIHGLKSGK-LLKE 343 (512)
Q Consensus 286 ~-------------i~vwd~~~~~~--~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~----dg~v~i~d~~~~~-~~~~ 343 (512)
. |++|++.++.. ...+.. . +.....++.|+|||++|+.... ++.|+++|+.++. ....
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 3 99999987642 222221 2 3445788999999998865543 2489999997764 4555
Q ss_pred eeCCccceeEEEEcCCCCEEEEEe-CC---CcEEEEeCCCCce--eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC
Q 010362 344 FRGHSSYVNDAIFTNDGSRVVTAS-SD---CTVKVWDLKSTDC--LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK 417 (512)
Q Consensus 344 ~~~~~~~v~~~~~~~~~~~l~~~~-~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 417 (512)
+..+....... ++++|..|+..+ .+ +.|..+|+.++.. ...+.+. ...+. .+++++..+++....
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~------~~~~~--~~s~~g~~lv~~~~~ 346 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE------RQQVL--TVHSGSGYLFAEYMV 346 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC------CSSCE--EEEEETTEEEEEEEE
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC------CCCEE--EEEEECCEEEEEEEE
Confidence 66565555544 666666655444 33 5799999987653 1233222 12222 677777455555555
Q ss_pred CC--cEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC----CeEEEEEcCCCee
Q 010362 418 TS--SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED----RNLYCFSHQSGKL 475 (512)
Q Consensus 418 ~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d----g~i~iwd~~~~~~ 475 (512)
++ .|++|++.+.....+... ..+.+..+.+++++..++....+ +.++.||+.+++.
T Consensus 347 ~g~~~l~~~d~~g~~~~~l~~p--~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 347 DATARVEQFDYEGKRVREVALP--GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp TTEEEEEEECTTSCEEEEECCS--SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CCeeEEEEEECCCCeeEEeecC--CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 55 688899887766555432 23456677778888877766544 8899999987754
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.51 E-value=2.8e-11 Score=112.39 Aligned_cols=222 Identities=12% Similarity=0.054 Sum_probs=150.2
Q ss_pred eeEEEEcCCCC-eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEe
Q 010362 266 VLCIEFSRDSE-MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF 344 (512)
Q Consensus 266 v~~l~~s~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~ 344 (512)
..+.+|+|++. ++++...++.|..||..+++.. .+. ....+.+++|+|+|+++++. .+ .|.+||..+++.....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~--~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA--LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE--CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE--CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 45678999754 5556666889999999887643 332 34679999999999876654 44 4999999887754322
Q ss_pred eC----CccceeEEEEcCCCCEEEEEeC------CCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEE
Q 010362 345 RG----HSSYVNDAIFTNDGSRVVTASS------DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 414 (512)
Q Consensus 345 ~~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 414 (512)
.. ....+++++++|+|+++++... .+.|..++ +++... +. ........++|+|++..++++
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~------~~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LF------ADISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EE------EEESSEEEEEECTTSCEEEEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-ee------CCCcccCCeEEcCCCCEEEEE
Confidence 21 1235889999999997665542 24566666 443322 11 011245789999998556666
Q ss_pred EcCCCcEEEEecC--Ce-E---EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEE
Q 010362 415 CNKTSSIYIMTLQ--GQ-V---VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG 488 (512)
Q Consensus 415 ~~~~~~i~~~~~~--~~-~---~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 488 (512)
.+.++.|.+|+.. +. . ...+............++++++|++.++...++.|.+||. +++.+..+..+...+++
T Consensus 197 ~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~ 275 (326)
T 2ghs_A 197 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTC 275 (326)
T ss_dssp ETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEE
T ss_pred ECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEE
Confidence 6778899999975 22 1 1122111112344678999999987777767789999998 67777777777778999
Q ss_pred EEEc-CCCCeEEEEE
Q 010362 489 VTHH-PHRNLLATYG 502 (512)
Q Consensus 489 v~~~-p~~~~l~s~~ 502 (512)
++|+ |++..|+.++
T Consensus 276 ~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 276 PAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEESTTSCEEEEEE
T ss_pred EEEecCCCCEEEEEe
Confidence 9998 8877654444
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.50 E-value=2.6e-12 Score=119.76 Aligned_cols=251 Identities=10% Similarity=-0.029 Sum_probs=167.1
Q ss_pred eEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe----------CCCeEEEEEccCCeeeEEecccc
Q 010362 236 FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS----------QDGKIKVWRIRSGQCLRRLERAH 305 (512)
Q Consensus 236 ~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~ 305 (512)
+|.++|..+++.+..+.. ...+ .+.++||+++++++. .+++|.+||+.+++.+.++..+.
T Consensus 47 ~vsvID~~t~~v~~~i~v--------G~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~ 116 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG--------AFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD 116 (368)
T ss_dssp EEEEEETTTTEEEEEEEE--------CTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT
T ss_pred eEEEEECCCCeEEEEEeC--------CCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCC
Confidence 889999999998876653 2334 799999999999886 36899999999999999886321
Q ss_pred ------ccCeEEEEEecCCCEEEEEeC--CCcEEE--EeCCCCceeEEeeCCccceeEEEEcCCC-CEEEEEeCCCcEEE
Q 010362 306 ------SEGVTSLVFSRDGSQILSTSF--DSTARI--HGLKSGKLLKEFRGHSSYVNDAIFTNDG-SRVVTASSDCTVKV 374 (512)
Q Consensus 306 ------~~~i~~~~~~~~~~~l~~~~~--dg~v~i--~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i 374 (512)
......++++|||++++++.. +..+.+ +|..+ +..+.... . ....|++ ..+++.+.||.+.+
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~--~--~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS--C--FHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS--C--CCCEEEETTEEECCCCTTSCEE
T ss_pred ccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC--c--eEEccCCCeEEEEEcCCCCEEE
Confidence 134678999999999999875 356888 99876 44443211 1 1223443 34556677888888
Q ss_pred EeCCC-----CceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeE---EEEeeCCc----ccC-
Q 010362 375 WDLKS-----TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV---VKSFSSGK----REG- 441 (512)
Q Consensus 375 wd~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~---~~~~~~~~----~~~- 441 (512)
.|+.+ ++...... ........+. . .+++ ..++..+. +.+.+.|..+.. ...+.... ...
T Consensus 190 vd~~~~~~~~~~v~~~~t--~~i~vg~~P~---~-~~~~-~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~ 261 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCT--GAQNCSSQAA---Q-ANYP-GMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNF 261 (368)
T ss_dssp EECCSSCCCCEECCCCSC--TTSCBCSCCE---E-ETTT-TEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTE
T ss_pred EECccccccCCeEEEEee--eeeeCCCCcc---c-cccC-CEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccc
Confidence 88876 33222111 0111112233 2 5555 34444444 899999986432 22221110 000
Q ss_pred --CcEEEEEECCCCCEEEEEeC-C--------CeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCC-eEEEEE-CCCeEE
Q 010362 442 --GDFVAACVSPKGEWIYCVGE-D--------RNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRN-LLATYG-EDCTMK 508 (512)
Q Consensus 442 --~~~~~~~~s~~g~~l~~g~~-d--------g~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~~-~dg~i~ 508 (512)
.....++++|||+.++++.. + +.+.++|..+++.+..+.... ...+++|+||++ ++++.. .++.|.
T Consensus 262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEE
T ss_pred ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEE
Confidence 11112679999999887643 2 356699999999999887544 588999999997 566777 599999
Q ss_pred EecC
Q 010362 509 LWKP 512 (512)
Q Consensus 509 iW~~ 512 (512)
++|+
T Consensus 341 VID~ 344 (368)
T 1mda_H 341 IYDA 344 (368)
T ss_dssp EEES
T ss_pred EEEC
Confidence 9985
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=1.9e-11 Score=112.48 Aligned_cols=230 Identities=14% Similarity=0.120 Sum_probs=154.5
Q ss_pred cCcceeEEEEcCCCC-eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCce
Q 010362 262 HDETVLCIEFSRDSE-MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL 340 (512)
Q Consensus 262 h~~~v~~l~~s~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~ 340 (512)
.........|+|+++ ++++...++.|..|+. +++ ...+. .....+..++++++|+++++...++.|..|+.. ++.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~-~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLL-DATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEE-ESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEe-CCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 445677899999998 5666667889999997 455 33343 355678999999999866665556789999985 553
Q ss_pred eEEee---CC-ccceeEEEEcCCCCEEEE----EeC-------------CCcEEEEeCCCCceeeecCCCCCCCCCCcee
Q 010362 341 LKEFR---GH-SSYVNDAIFTNDGSRVVT----ASS-------------DCTVKVWDLKSTDCLQTFKPPPPLRGGDASV 399 (512)
Q Consensus 341 ~~~~~---~~-~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i 399 (512)
..... +. ...+++++++|+|+..++ |.. .+.|..||..+++..... .....
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--------~~~~p 190 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--------DLDHP 190 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--------EESSE
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--------cCCCC
Confidence 32211 11 134778999999998876 321 256788887666543321 11245
Q ss_pred EEEEEcCCCCCeEEEEcCC------CcEEEEecCCeEE---EEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Q 010362 400 NSVHLFPKNPDHIVVCNKT------SSIYIMTLQGQVV---KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSH 470 (512)
Q Consensus 400 ~~~~~~~~~~~~l~~~~~~------~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~ 470 (512)
..++++|++ ..++++... +.|+.|++.+..+ ..+... .......++++++|+ |++++.+ .|.+|+.
T Consensus 191 ~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~--~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~ 265 (305)
T 3dr2_A 191 NGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV--PDGLPDGFCVDRGGW-LWSSSGT-GVCVFDS 265 (305)
T ss_dssp EEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC--SSSCCCSEEECTTSC-EEECCSS-EEEEECT
T ss_pred cceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC--CCCCCCeEEECCCCC-EEEecCC-cEEEECC
Confidence 789999998 444444443 7899999874322 112111 123345688999999 4455544 5999997
Q ss_pred CCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEe
Q 010362 471 QSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510 (512)
Q Consensus 471 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW 510 (512)
+++.+..+..+. .+.+++|+|+++.|..++.++..++.
T Consensus 266 -~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 266 -DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp -TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred -CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 577777776555 58899999999888888877655553
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.48 E-value=7.5e-11 Score=107.98 Aligned_cols=227 Identities=9% Similarity=0.093 Sum_probs=152.0
Q ss_pred CceEEEEECCC-CCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEc
Q 010362 214 SHAECARFSPD-GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI 292 (512)
Q Consensus 214 ~~v~~~~~s~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~ 292 (512)
.-..+..|+|+ +.++++...++.|..||..++.... + .....+.+++++|+|+++++ . ++.|.+||.
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~---------~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~ 80 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V---------TMDAPVSSVALRQSGGYVAT-I-GTKFCALNW 80 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E---------ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEET
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E---------eCCCceEEEEECCCCCEEEE-E-CCeEEEEEC
Confidence 34568899995 4566666678999999988765421 1 14567999999999995554 4 568999999
Q ss_pred cCCeeeEEeccc---cccCeEEEEEecCCCEEEEEeC-----------CCcEEEEeCCCCceeEEeeCCccceeEEEEcC
Q 010362 293 RSGQCLRRLERA---HSEGVTSLVFSRDGSQILSTSF-----------DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN 358 (512)
Q Consensus 293 ~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~-----------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 358 (512)
.+++........ ....+..++++|+|+++++... .+.|+.++.. ++.. .+..+....+.++|+|
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSL 158 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECT
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcC
Confidence 888754332211 1245789999999986665432 1344444442 3332 2333344578899999
Q ss_pred CCCEEEE-EeCCCcEEEEeC--CCCcee--eecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEE
Q 010362 359 DGSRVVT-ASSDCTVKVWDL--KSTDCL--QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVK 432 (512)
Q Consensus 359 ~~~~l~~-~~~dg~i~iwd~--~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~ 432 (512)
+++.++. .+.++.|.+||+ .++... ..+.. ..........+++.+++ .+.++....+.|..||.. +....
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~---~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYK---LEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEE---CCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTCCEEE
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEE---CCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCceEEE
Confidence 9987754 455788999987 455421 11111 11123467889999987 777777788899999997 77666
Q ss_pred EeeCCcccCCcEEEEEEC-CCCCEEEEEeC
Q 010362 433 SFSSGKREGGDFVAACVS-PKGEWIYCVGE 461 (512)
Q Consensus 433 ~~~~~~~~~~~~~~~~~s-~~g~~l~~g~~ 461 (512)
.+... ...+++++|+ |+++.|++++.
T Consensus 235 ~i~~p---~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 235 TVKLP---VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEECS---SSBEEEEEEESGGGCEEEEEEB
T ss_pred EEECC---CCCceEEEEeCCCCCEEEEEcC
Confidence 66543 2458899997 88888776664
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=1.7e-11 Score=112.84 Aligned_cols=229 Identities=9% Similarity=0.088 Sum_probs=155.4
Q ss_pred cCcCceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 211 GTKSHAECARFSPDGQ-FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
..........|+|+|+ +++++..++.|..|+. +++.. .+..+...+..++++++|+++++...++.|.+
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~---------~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVD---------VLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEE---------EEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEE---------EEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 3445677899999998 6677778899999987 44321 12235667899999999997666555678999
Q ss_pred EEccCCeeeEEecc---ccccCeEEEEEecCCCEEEE----EeC-------------CCcEEEEeCCCCceeEEeeCCcc
Q 010362 290 WRIRSGQCLRRLER---AHSEGVTSLVFSRDGSQILS----TSF-------------DSTARIHGLKSGKLLKEFRGHSS 349 (512)
Q Consensus 290 wd~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~----~~~-------------dg~v~i~d~~~~~~~~~~~~~~~ 349 (512)
|+.. ++....... .....+.++++.|+|+..++ |.. .+.|+.+|..+++..... ...
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~ 188 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD 188 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC
Confidence 9975 553322210 11234678999999997776 332 256888887666654433 334
Q ss_pred ceeEEEEcCCCCEEEEEeCC------CcEEEEeCCCCcee--eecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcE
Q 010362 350 YVNDAIFTNDGSRVVTASSD------CTVKVWDLKSTDCL--QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421 (512)
Q Consensus 350 ~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i 421 (512)
..+.++|+|+++.|+.+... +.|.+|++..+... ..+... .......+++.+++ . +.++.. +.|
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-----~~~~pdgi~~d~~G-~-lwv~~~-~gv 260 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-----PDGLPDGFCVDRGG-W-LWSSSG-TGV 260 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-----SSSCCCSEEECTTS-C-EEECCS-SEE
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-----CCCCCCeEEECCCC-C-EEEecC-CcE
Confidence 57889999999988777665 68999998754311 111110 12334567888877 4 444444 459
Q ss_pred EEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCe
Q 010362 422 YIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN 464 (512)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~ 464 (512)
.+|+..+.....+.... .+..++|+++++.|+.++.++.
T Consensus 261 ~~~~~~g~~~~~~~~~~----~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 261 CVFDSDGQLLGHIPTPG----TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp EEECTTSCEEEEEECSS----CCCEEEECTTSCEEEEEETTEE
T ss_pred EEECCCCCEEEEEECCC----ceeEEEEeCCCCEEEEEcCCeE
Confidence 99999888777766533 3678899999999988887643
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.48 E-value=1.5e-12 Score=133.93 Aligned_cols=235 Identities=14% Similarity=0.131 Sum_probs=153.8
Q ss_pred cCcceeEEEEcCCCCeEEEEe-----CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCc-------
Q 010362 262 HDETVLCIEFSRDSEMLASGS-----QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDST------- 329 (512)
Q Consensus 262 h~~~v~~l~~s~~~~~l~s~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~------- 329 (512)
|...+..++|||||++||.+. ....|++||+.+|+.+.... .......++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL--KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE--EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc--CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 556788999999999988543 23579999999998654321 11123578899 9999999987743
Q ss_pred ------EEEEeCCCCce----eEEeeC-CccceeEEEEcCCCCEEEEEeC----CCcEEEEeCCCCc-eeeecCCCCCCC
Q 010362 330 ------ARIHGLKSGKL----LKEFRG-HSSYVNDAIFTNDGSRVVTASS----DCTVKVWDLKSTD-CLQTFKPPPPLR 393 (512)
Q Consensus 330 ------v~i~d~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~~~~~~~~ 393 (512)
|++|++.++.. +..... |.....++.|+|||++|+.... +..|.++|+.++. ....+...
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~---- 279 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD---- 279 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS----
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC----
Confidence 99999977643 222233 4445788999999998865432 2479999998763 22333221
Q ss_pred CCCceeEEEEEcCCCCCeEEEEcCC---CcEEEEecCCeEE---EEeeCCcccCCcEEEEEECCCCCEEEEEeC-CC--e
Q 010362 394 GGDASVNSVHLFPKNPDHIVVCNKT---SSIYIMTLQGQVV---KSFSSGKREGGDFVAACVSPKGEWIYCVGE-DR--N 464 (512)
Q Consensus 394 ~~~~~i~~~~~~~~~~~~l~~~~~~---~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~-dg--~ 464 (512)
....... +++++..+++.+..+ +.|..+++.+... ..+.... ..+. .|++++++|+.... +| .
T Consensus 280 --~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~--~~s~~g~~lv~~~~~~g~~~ 351 (693)
T 3iuj_A 280 --LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPER---QQVL--TVHSGSGYLFAEYMVDATAR 351 (693)
T ss_dssp --SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC---SSCE--EEEEETTEEEEEEEETTEEE
T ss_pred --CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCC---CCEE--EEEEECCEEEEEEEECCeeE
Confidence 1222222 556665666666554 5788899875322 3333322 2233 88999998877764 44 6
Q ss_pred EEEEEcCCCeeEEecc-ccCCCeEEEEEcCCCCeEEEEECC----CeEEEecC
Q 010362 465 LYCFSHQSGKLEHLMK-VHEKDVIGVTHHPHRNLLATYGED----CTMKLWKP 512 (512)
Q Consensus 465 i~iwd~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~~~d----g~i~iW~~ 512 (512)
|++|++..+.. ..+. ...+.+..+.++|++..++....+ ++|..||+
T Consensus 352 l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 352 VEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EEEECTTSCEE-EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEEEECCCCee-EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 89999875544 3333 344567788888888766554444 77887763
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=2.6e-10 Score=105.80 Aligned_cols=226 Identities=12% Similarity=0.054 Sum_probs=150.5
Q ss_pred ceEEEEECCCC-CEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc
Q 010362 215 HAECARFSPDG-QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 293 (512)
Q Consensus 215 ~v~~~~~s~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~ 293 (512)
...+..|+|++ .+++++..++.|..||..+++... +. ....+.+++|+|+|+++++. .+ .|.+||..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~---------~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~ 117 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA---------LPFMGSALAKISDSKQLIAS-DD-GLFLRDTA 117 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE---------CSSCEEEEEEEETTEEEEEE-TT-EEEEEETT
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE---------CCCcceEEEEeCCCeEEEEE-CC-CEEEEECC
Confidence 35678999975 456666678999999988775431 11 34579999999999877754 34 59999998
Q ss_pred CCeeeEEeccc---cccCeEEEEEecCCCEEEEEeC------CCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEE
Q 010362 294 SGQCLRRLERA---HSEGVTSLVFSRDGSQILSTSF------DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364 (512)
Q Consensus 294 ~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 364 (512)
+++........ ....+.+++++|+|+.+++... .+.|..++ +++.. .+..+......++|+|+++.++
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGY 194 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEE
Confidence 88754332211 1245889999999987665432 24566666 44433 3333334577899999998775
Q ss_pred EE-eCCCcEEEEeCC--CC-cee--eecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCc
Q 010362 365 TA-SSDCTVKVWDLK--ST-DCL--QTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK 438 (512)
Q Consensus 365 ~~-~~dg~i~iwd~~--~~-~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 438 (512)
.+ +.++.|.+||+. ++ ... ..+.. ..........+.+.+++ .++++...++.|..|+..+.....+...
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~---~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~g~~~~~i~~~- 269 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFID---STGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTDGNHIARYEVP- 269 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEE---CTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTTCCEEEEEECS-
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEE---CCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCCCCEEEEEECC-
Confidence 55 456889999986 55 311 11110 01123456788888887 6666666678899999987766655432
Q ss_pred ccCCcEEEEEEC-CCCCEEEEEeCC
Q 010362 439 REGGDFVAACVS-PKGEWIYCVGED 462 (512)
Q Consensus 439 ~~~~~~~~~~~s-~~g~~l~~g~~d 462 (512)
...+.+++|+ ++++.|++++..
T Consensus 270 --~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 270 --GKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp --CSBEEEEEEESTTSCEEEEEEBC
T ss_pred --CCCcEEEEEecCCCCEEEEEecC
Confidence 3458899997 898877666543
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.40 E-value=1.7e-10 Score=107.80 Aligned_cols=228 Identities=9% Similarity=0.035 Sum_probs=154.9
Q ss_pred EEc--CCCCeEEEE-eCCCeEEEEEccCC----eeeEEec------cccccCeEEEEEecCCCEEEEEeCC------CcE
Q 010362 270 EFS--RDSEMLASG-SQDGKIKVWRIRSG----QCLRRLE------RAHSEGVTSLVFSRDGSQILSTSFD------STA 330 (512)
Q Consensus 270 ~~s--~~~~~l~s~-~~dg~i~vwd~~~~----~~~~~~~------~~~~~~i~~~~~~~~~~~l~~~~~d------g~v 330 (512)
.++ +++++|+.. ..++.|.++|+.+. +..+.+. .........+..+|+| .++++..+ |.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 777776654 45789999999765 5566552 0112245667888999 66665555 789
Q ss_pred EEEeCCCCceeEEeeCCcc---ceeEEEEcCCCCEEEEEe-------------------CCCcEEEEeCCCCceeeecCC
Q 010362 331 RIHGLKSGKLLKEFRGHSS---YVNDAIFTNDGSRVVTAS-------------------SDCTVKVWDLKSTDCLQTFKP 388 (512)
Q Consensus 331 ~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~ 388 (512)
.++|.++++.+.++..... .-..+.|+|+++.++++. .+.+|.+||+.+++...++..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 9999999999998863322 234688899999888874 368899999999887777664
Q ss_pred CCCCCCCCceeEEEEE--cCCCCCeEEEEc-----CCCcEEEEecCCeEEEEee---CCcc---------------cCCc
Q 010362 389 PPPLRGGDASVNSVHL--FPKNPDHIVVCN-----KTSSIYIMTLQGQVVKSFS---SGKR---------------EGGD 443 (512)
Q Consensus 389 ~~~~~~~~~~i~~~~~--~~~~~~~l~~~~-----~~~~i~~~~~~~~~~~~~~---~~~~---------------~~~~ 443 (512)
.. .......+.+ +|++...++++- .++.|.+|..++....... .... ....
T Consensus 247 g~----~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 247 GE----ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp CT----TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred CC----CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 31 1233445555 888866666666 7788887766532111111 0000 0234
Q ss_pred EEEEEECCCCCEEEEEe-CCCeEEEEEcCC---CeeEEeccccC--------------CCeEEEEEcCCCCeEEEEE
Q 010362 444 FVAACVSPKGEWIYCVG-EDRNLYCFSHQS---GKLEHLMKVHE--------------KDVIGVTHHPHRNLLATYG 502 (512)
Q Consensus 444 ~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~---~~~~~~~~~h~--------------~~v~~v~~~p~~~~l~s~~ 502 (512)
...+.+|+||++|+++. ..+.|.+||+.+ .+++..+.... +....++++|||++|+++.
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 67889999999999988 578999999863 34555443221 1357899999999988887
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.40 E-value=4.3e-10 Score=105.09 Aligned_cols=235 Identities=11% Similarity=0.076 Sum_probs=154.4
Q ss_pred CCCCEEEEE-eCCCeEEEEEcCCC----eeeccccccccceeec-cCcceeEEEEcCCCCeEEEEeCC------CeEEEE
Q 010362 223 PDGQFLVSC-SFDGFIEVWDYLSG----KLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQD------GKIKVW 290 (512)
Q Consensus 223 ~~~~~l~sg-~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~~l~s~~~d------g~i~vw 290 (512)
+++++|++. ..+++|.|+|+.+. +....+... ..... .......+..+|+| +++++..+ |.|.++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~--~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPE--EVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHH--HHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechh--hcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 788877765 47889999998755 333333100 00000 11245667888999 77776655 789999
Q ss_pred EccCCeeeEEeccccc--cCeEEEEEecCCCEEEEEe-------------------CCCcEEEEeCCCCceeEEeeCC--
Q 010362 291 RIRSGQCLRRLERAHS--EGVTSLVFSRDGSQILSTS-------------------FDSTARIHGLKSGKLLKEFRGH-- 347 (512)
Q Consensus 291 d~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~-------------------~dg~v~i~d~~~~~~~~~~~~~-- 347 (512)
|..+++.+.++..+.. .--..+.|+|+++.+++.. .+.+|.+||+.+++.+.++...
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 9999999998863322 2234688999999888875 3689999999998888877653
Q ss_pred ccceeEEEE--cCCCCEEEEEe------CCCcEEEEeCCCCce--eeecCCCC-----CCC-------CCCceeEEEEEc
Q 010362 348 SSYVNDAIF--TNDGSRVVTAS------SDCTVKVWDLKSTDC--LQTFKPPP-----PLR-------GGDASVNSVHLF 405 (512)
Q Consensus 348 ~~~v~~~~~--~~~~~~l~~~~------~dg~i~iwd~~~~~~--~~~~~~~~-----~~~-------~~~~~i~~~~~~ 405 (512)
......+.| +|+++++++++ .+++|.+|....+.. .+.+.... .+. +.......+.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 133455656 99999887776 466887766544321 11110000 000 002357789999
Q ss_pred CCCCCeEEEEcCCCcEEEEecC----CeEEEEeeCCc-----------ccCCcEEEEEECCCCCEEEEEe
Q 010362 406 PKNPDHIVVCNKTSSIYIMTLQ----GQVVKSFSSGK-----------REGGDFVAACVSPKGEWIYCVG 460 (512)
Q Consensus 406 ~~~~~~l~~~~~~~~i~~~~~~----~~~~~~~~~~~-----------~~~~~~~~~~~s~~g~~l~~g~ 460 (512)
|++..++++.-..+.|.++|+. .+.+..+..+. ...+....+.++|||++|+++.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9997777777888999999985 23333333320 0011356799999999999998
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.38 E-value=9.7e-10 Score=104.32 Aligned_cols=258 Identities=11% Similarity=0.063 Sum_probs=167.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEecc
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER 303 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 303 (512)
++..+++++.++.|..+|..+++........ .......... +..++.++.++.|..+|..+|+.+.....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~--------~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVA--------GEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECS--------SCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCC--------CceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 4567888888999999999999876544321 1111111121 45778888899999999999998877652
Q ss_pred ccccCe------EEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccc-------eeEEEEcC--CCCEEEEEeC
Q 010362 304 AHSEGV------TSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSY-------VNDAIFTN--DGSRVVTASS 368 (512)
Q Consensus 304 ~~~~~i------~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~-------v~~~~~~~--~~~~l~~~~~ 368 (512)
. .++ ...... +..+++++.++.+..+|..+++.+......... +..+...| .+..++.++.
T Consensus 172 ~--~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~ 247 (376)
T 3q7m_A 172 D--MPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY 247 (376)
T ss_dssp C--C-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT
T ss_pred C--CCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec
Confidence 2 111 122222 457888888999999999999988776532110 00011111 2457888888
Q ss_pred CCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEE
Q 010362 369 DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAA 447 (512)
Q Consensus 369 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~ 447 (512)
++.+..+|.++++........ ....+... ...+++++.++.+..+|.. ++......... .......
T Consensus 248 ~g~l~~~d~~tG~~~w~~~~~--------~~~~~~~~---~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~--~~~~~~~ 314 (376)
T 3q7m_A 248 NGNLTALDLRSGQIMWKRELG--------SVNDFIVD---GNRIYLVDQNDRVMALTIDGGVTLWTQSDLL--HRLLTSP 314 (376)
T ss_dssp TSCEEEEETTTCCEEEEECCC--------CEEEEEEE---TTEEEEEETTCCEEEEETTTCCEEEEECTTT--TSCCCCC
T ss_pred CcEEEEEECCCCcEEeeccCC--------CCCCceEE---CCEEEEEcCCCeEEEEECCCCcEEEeecccC--CCcccCC
Confidence 999999999999887665422 12233332 2678888889999999987 44444333111 1111112
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEE-EEEcCCCCeEEEEECCCeEEEecC
Q 010362 448 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIG-VTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 448 ~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~-v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.. .+..|++++.+|.++++|..+|+.+.........+.+ ... .+..|+.++.||.|..|++
T Consensus 315 ~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~~ 376 (376)
T 3q7m_A 315 VL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSITR 376 (376)
T ss_dssp EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEEC
T ss_pred EE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEeC
Confidence 22 3578899999999999999999988776653333322 222 2456778899999999874
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.38 E-value=6.1e-11 Score=121.09 Aligned_cols=285 Identities=10% Similarity=0.101 Sum_probs=180.9
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeecc-C-cce-eEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEE
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH-D-ETV-LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR 300 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h-~-~~v-~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 300 (512)
.+..+++++.++.|.-+|..+|+.+.............+ . ..+ ..++. .+..+++++.|+.|..+|..+|+.+.+
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 366778888899999999999998776543211100000 0 000 11222 356788888999999999999999887
Q ss_pred eccc-cccCeEEEEEec---CCCEEEEEe------CCCcEEEEeCCCCceeEEeeCCc----------------------
Q 010362 301 LERA-HSEGVTSLVFSR---DGSQILSTS------FDSTARIHGLKSGKLLKEFRGHS---------------------- 348 (512)
Q Consensus 301 ~~~~-~~~~i~~~~~~~---~~~~l~~~~------~dg~v~i~d~~~~~~~~~~~~~~---------------------- 348 (512)
+... +......+..+| ++ .+++++ .+|.|+.||.++|+.+..+....
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 7632 211111111112 44 455543 36899999999999988775210
Q ss_pred ---------cceeEEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCceeeecCCCCC-CCC--CCc
Q 010362 349 ---------SYVNDAIFTNDGSRVVTASSDCT-------------------VKVWDLKSTDCLQTFKPPPP-LRG--GDA 397 (512)
Q Consensus 349 ---------~~v~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~-~~~--~~~ 397 (512)
.....++++|++..++.++.++. |..+|.++++....+..... ... ...
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 01125788998889998887764 99999999998887654311 000 111
Q ss_pred eeEEEEEcCCC--CCeEEEEcCCCcEEEEecC-CeEEEEeeCCc-------------------------c----------
Q 010362 398 SVNSVHLFPKN--PDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK-------------------------R---------- 439 (512)
Q Consensus 398 ~i~~~~~~~~~--~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~-------------------------~---------- 439 (512)
+..-.....++ ...++.++.+|.++++|.. |+.+....... .
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 11111111122 1378889999999999987 55443222111 0
Q ss_pred -cCCcEEEEEECCCCCEEEEEeC---------------------------------------------CCeEEEEEcCCC
Q 010362 440 -EGGDFVAACVSPKGEWIYCVGE---------------------------------------------DRNLYCFSHQSG 473 (512)
Q Consensus 440 -~~~~~~~~~~s~~g~~l~~g~~---------------------------------------------dg~i~iwd~~~~ 473 (512)
.......++++|+..++++... +|.|+.||+.+|
T Consensus 386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG 465 (689)
T 1yiq_A 386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ 465 (689)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence 0001123688888888887632 378999999999
Q ss_pred eeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 474 KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 474 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+.+-.+..+. ++..-.+...+.+++.++.||.++.||+
T Consensus 466 ~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 466 QAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp EEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred CeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEEC
Confidence 9988776543 3333355667888999999999999985
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.38 E-value=7.9e-11 Score=120.01 Aligned_cols=283 Identities=10% Similarity=0.077 Sum_probs=183.9
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeeccccccccceeec---cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEe
Q 010362 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM---HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRL 301 (512)
Q Consensus 225 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 301 (512)
+..+++++.++.|.-+|..+|+.+............. .......+++ ++..+++++.|+.|..+|..+|+.+.++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 5567777888999999999999887654322110000 0000112222 3567888889999999999999998887
Q ss_pred ccccc----cCeEE-EEEecCCCEEEEEeC------CCcEEEEeCCCCceeEEeeCCccc--------------------
Q 010362 302 ERAHS----EGVTS-LVFSRDGSQILSTSF------DSTARIHGLKSGKLLKEFRGHSSY-------------------- 350 (512)
Q Consensus 302 ~~~~~----~~i~~-~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~-------------------- 350 (512)
..... ..+.+ ... .+..+++++. +|.|+.+|.++|+.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 63201 11211 111 2345666553 689999999999999877643211
Q ss_pred ------------eeEEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCceeeecCCCCCC-C--CCC
Q 010362 351 ------------VNDAIFTNDGSRVVTASSDC-------------------TVKVWDLKSTDCLQTFKPPPPL-R--GGD 396 (512)
Q Consensus 351 ------------v~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~-~--~~~ 396 (512)
...++++|++..++.++.++ .|..+|.++++....+.....- - ...
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~ 312 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST 312 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence 13578889888888887664 5999999999988776643210 0 001
Q ss_pred ceeEEEEEcCCCC--CeEEEEcCCCcEEEEecC-CeEEEEeeCCccc--------CCc----------------------
Q 010362 397 ASVNSVHLFPKNP--DHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKRE--------GGD---------------------- 443 (512)
Q Consensus 397 ~~i~~~~~~~~~~--~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~--------~~~---------------------- 443 (512)
....-+....++. ..++.++.+|.++++|.. ++.+......... +..
T Consensus 313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~ 392 (677)
T 1kb0_A 313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA 392 (677)
T ss_dssp SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred CCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence 1111122222332 578889999999999987 5555444322100 000
Q ss_pred --EEEEEECCCCCEEEEEeCC-------------------------------------------CeEEEEEcCCCeeEEe
Q 010362 444 --FVAACVSPKGEWIYCVGED-------------------------------------------RNLYCFSHQSGKLEHL 478 (512)
Q Consensus 444 --~~~~~~s~~g~~l~~g~~d-------------------------------------------g~i~iwd~~~~~~~~~ 478 (512)
...++++|++.++++...+ |.|..||..+++.+-.
T Consensus 393 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 472 (677)
T 1kb0_A 393 HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS 472 (677)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE
T ss_pred cCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEee
Confidence 1246788998888876432 7899999999998877
Q ss_pred ccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 479 MKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 479 ~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+. +..++.+..+...+.+++.++.||.+++||+
T Consensus 473 ~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 473 VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 76 3344555556677888888999999999985
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.37 E-value=1.9e-13 Score=129.11 Aligned_cols=147 Identities=15% Similarity=0.175 Sum_probs=82.7
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEecc
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER 303 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 303 (512)
++..+++++.||.|+.||..+|+....+.. ..+.+..+..++..+++++.||.|+.||..+|+.+.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeec
Confidence 578899999999999999999988765432 2344444556777888888999999999999987766642
Q ss_pred ccccCeE-EEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010362 304 AHSEGVT-SLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC 382 (512)
Q Consensus 304 ~~~~~i~-~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 382 (512)
.....+. +..+. ++..+++++.++.++.||.++|+.+..+..+.. ..++|++..+++++.|+.|+.||.++++.
T Consensus 78 ~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 78 TIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp CHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred cCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 2111111 11111 345678888899999999999999888765542 34566788899999999999999998875
Q ss_pred eee
Q 010362 383 LQT 385 (512)
Q Consensus 383 ~~~ 385 (512)
...
T Consensus 153 ~W~ 155 (369)
T 2hz6_A 153 RWN 155 (369)
T ss_dssp CCE
T ss_pred EEe
Confidence 544
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.37 E-value=1.9e-09 Score=102.22 Aligned_cols=274 Identities=9% Similarity=0.070 Sum_probs=169.3
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeec-cCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEec
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM-HDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE 302 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 302 (512)
.+..+++++.++.|..+|..+++............... ....+.+.. ..++..++.++.++.|..+|..+|+.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 46678888889999999999998775544321100000 012222211 1235678888889999999999999887765
Q ss_pred cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccce-----eEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010362 303 RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYV-----NDAIFTNDGSRVVTASSDCTVKVWDL 377 (512)
Q Consensus 303 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~iwd~ 377 (512)
. ........... +..+++++.++.|..+|.++++.+..+....... ...... +..++.++.+|.+..+|.
T Consensus 131 ~-~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 131 V-AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp C-SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred C-CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence 2 22111122222 4578888899999999999999888776432211 222222 356888888999999999
Q ss_pred CCCceeeecCCCCCCCCC-CceeEEEEEcCC-CCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCC
Q 010362 378 KSTDCLQTFKPPPPLRGG-DASVNSVHLFPK-NPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGE 454 (512)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~ 454 (512)
.+++.............. ...+..+...|. ....+++++.++.+..+|.. ++........ ....+.. ++.
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~-----~~~~~~~--~~~ 278 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG-----SVNDFIV--DGN 278 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC-----CEEEEEE--ETT
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC-----CCCCceE--ECC
Confidence 999887766533210000 000000000110 12677888889999999987 5544433321 1333333 467
Q ss_pred EEEEEeCCCeEEEEEcCCCeeEEeccc-cCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 455 WIYCVGEDRNLYCFSHQSGKLEHLMKV-HEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 455 ~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.+++++.+|.++.+|..+|+.+..... ....+..... .+..|+.++.+|.|.++|+
T Consensus 279 ~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 279 RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEET
T ss_pred EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEEC
Confidence 888899999999999999998766542 2222222222 2467788888999998875
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.34 E-value=1.2e-10 Score=112.82 Aligned_cols=263 Identities=12% Similarity=0.118 Sum_probs=180.5
Q ss_pred EEEEeCCCeEEEEEcCCCeeeccccccccc-------------eee------------cc------CcceeEEEEcC---
Q 010362 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADE-------------TFM------------MH------DETVLCIEFSR--- 273 (512)
Q Consensus 228 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~-------------~~~------------~h------~~~v~~l~~s~--- 273 (512)
|.+|+..|.++|+-+-+++.+..+...... .+. .+ .+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 567788888888888777665544321110 110 00 11122244444
Q ss_pred --CCCeEEEEeC-CCeEEEEEccCCeeeEEeccccccCeEEEEE-e-cCCCEEEEEe------------------CCCcE
Q 010362 274 --DSEMLASGSQ-DGKIKVWRIRSGQCLRRLERAHSEGVTSLVF-S-RDGSQILSTS------------------FDSTA 330 (512)
Q Consensus 274 --~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~l~~~~------------------~dg~v 330 (512)
||+++..+.. ++.|.+.|+.+.++...+.......+..+++ + |++.++++++ .++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 7888877765 4579999999999888554345567889998 5 8999999885 24689
Q ss_pred EEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCC--------------------------------------cE
Q 010362 331 RIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDC--------------------------------------TV 372 (512)
Q Consensus 331 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------------------------------~i 372 (512)
.++|..+.+...++.-.. ....++++|+|+++++++.+. .|
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999998888877433 356788999999999888553 36
Q ss_pred EEEeCCC--Cce-eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-------------EEEEeeC
Q 010362 373 KVWDLKS--TDC-LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-------------VVKSFSS 436 (512)
Q Consensus 373 ~iwd~~~--~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-------------~~~~~~~ 436 (512)
.+.|.++ ++. +..++. .....++.++|++...++++..+..+.++|+... ......
T Consensus 257 ~VID~~~~~~~~~~~~Ipv-------g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~- 328 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPI-------ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE- 328 (595)
T ss_dssp EEEECSGGGCCSSEEEEEE-------ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-
T ss_pred EEEeCcccCCceeEEEEec-------CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-
Confidence 6666665 332 223321 1245678999999777888889999999999843 222222
Q ss_pred CcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCC----------CeeEEeccccCCCe-----EEEEEcCCCCeEEE
Q 010362 437 GKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQS----------GKLEHLMKVHEKDV-----IGVTHHPHRNLLAT 500 (512)
Q Consensus 437 ~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~----------~~~~~~~~~h~~~v-----~~v~~~p~~~~l~s 500 (512)
.+.....++|+|+| ++++.. .|+.|.+||+.+ .+.+..+..|-.+- .++..+|||++|++
T Consensus 329 ---vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 329 ---LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp ---CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred ---CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 23457889999999 665554 799999999987 45666666554332 23356799999998
Q ss_pred EEC
Q 010362 501 YGE 503 (512)
Q Consensus 501 ~~~ 503 (512)
+..
T Consensus 405 ~Nk 407 (595)
T 1fwx_A 405 LSK 407 (595)
T ss_dssp EES
T ss_pred cCC
Confidence 763
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.34 E-value=4.3e-10 Score=98.89 Aligned_cols=214 Identities=10% Similarity=0.031 Sum_probs=150.1
Q ss_pred cccceEEEecCcCceEEEEECCCCCEEEEEeC--CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEE
Q 010362 202 TTLSHTIKFGTKSHAECARFSPDGQFLVSCSF--DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA 279 (512)
Q Consensus 202 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~ 279 (512)
.+...++..+.......++|+|++.+.++.+. ++.|.++|..+++....+.... + .....+++. ++.|.
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~------~-~fgeGi~~~--g~~ly 79 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD------S-YFGEGLTLL--NEKLY 79 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT------T-CCEEEEEEE--TTEEE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC------C-cceEEEEEe--CCEEE
Confidence 34455554444445689999998755555443 5799999999999887654321 1 112245554 44454
Q ss_pred EE-eCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCc--c---ceeE
Q 010362 280 SG-SQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS--S---YVND 353 (512)
Q Consensus 280 s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~--~---~v~~ 353 (512)
.+ -.++.+.++|..+.+.+.++..+ ... ...+++||+.++++..++.|.++|..+.+.+..+.-.. . .++.
T Consensus 80 v~t~~~~~v~viD~~t~~v~~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 80 QVVWLKNIGFIYDRRTLSNIKNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp EEETTCSEEEEEETTTTEEEEEEECC-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred EEEecCCEEEEEECCCCcEEEEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 44 45789999999999999988643 121 23456688888888788999999999998888776422 1 3667
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCC-------CCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEec
Q 010362 354 AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPP-------PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTL 426 (512)
Q Consensus 354 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~ 426 (512)
+.|. ++...+....++.|.+.|..+++....+.... .........+.++++|++..+++++...+.++..++
T Consensus 157 le~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp EEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 8888 66555555567899999999999888876431 001112466899999999888999999999998887
Q ss_pred CC
Q 010362 427 QG 428 (512)
Q Consensus 427 ~~ 428 (512)
..
T Consensus 236 ~~ 237 (266)
T 2iwa_A 236 HL 237 (266)
T ss_dssp EE
T ss_pred ec
Confidence 63
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.33 E-value=5.8e-10 Score=113.87 Aligned_cols=267 Identities=11% Similarity=0.112 Sum_probs=168.4
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeecccccc-ccc-eeeccCcceeEEEEcCCCCeEEEEe------CCCeEEEEEccCC
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQ-ADE-TFMMHDETVLCIEFSRDSEMLASGS------QDGKIKVWRIRSG 295 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~~-~~~~h~~~v~~l~~s~~~~~l~s~~------~dg~i~vwd~~~~ 295 (512)
.+..+++++.||.|..+|..+|+........ ... .......++ + .++. +++++ .+|.|..||..+|
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~----v-~~g~-v~vg~~~~~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPR----V-VNGK-VVIGNGGAEFGVRGYVTAYDAETG 193 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCE----E-ETTE-EEECCBCTTTCCBCEEEEEETTTC
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcE----E-ECCE-EEEEeCCCccCCCCEEEEEECCCC
Confidence 4567888999999999999999987655431 000 000011111 1 1444 44443 3789999999999
Q ss_pred eeeEEecccc------------------------------ccCeEEEEEecCCCEEEEEeCCCc----------------
Q 010362 296 QCLRRLERAH------------------------------SEGVTSLVFSRDGSQILSTSFDST---------------- 329 (512)
Q Consensus 296 ~~~~~~~~~~------------------------------~~~i~~~~~~~~~~~l~~~~~dg~---------------- 329 (512)
+.+.++.... ......+++.|++..+++++.++.
T Consensus 194 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y 273 (689)
T 1yiq_A 194 KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLF 273 (689)
T ss_dssp CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTT
T ss_pred cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 9887765211 011125788898899999987764
Q ss_pred ---EEEEeCCCCceeEEeeC--Cc-------cceeEEEEcCCCC---EEEEEeCCCcEEEEeCCCCceeeecCCCCCC--
Q 010362 330 ---ARIHGLKSGKLLKEFRG--HS-------SYVNDAIFTNDGS---RVVTASSDCTVKVWDLKSTDCLQTFKPPPPL-- 392 (512)
Q Consensus 330 ---v~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-- 392 (512)
|..+|.++|+.+..++. |. .++.......+|+ .++.++.+|.++++|.++++.+.........
T Consensus 274 ~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 353 (689)
T 1yiq_A 274 LSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWT 353 (689)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccc
Confidence 99999999999988764 21 1121222223554 7888999999999999999887433221100
Q ss_pred --------------------CCC-----------CceeEEEEEcCCCCCeEEEEcC------------------------
Q 010362 393 --------------------RGG-----------DASVNSVHLFPKNPDHIVVCNK------------------------ 417 (512)
Q Consensus 393 --------------------~~~-----------~~~i~~~~~~~~~~~~l~~~~~------------------------ 417 (512)
... ...-..++++|.. .++++...
T Consensus 354 ~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~-~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (689)
T 1yiq_A 354 KGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT-GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQL 432 (689)
T ss_dssp EEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT-TEEEEEEEECCEEEECCSSCCCCCSCTTSCCC
T ss_pred cccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC-CEEEEeccccceeeeecccccccccccccccc
Confidence 000 0011225667765 34444311
Q ss_pred ---------------------CCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCee
Q 010362 418 ---------------------TSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKL 475 (512)
Q Consensus 418 ---------------------~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~ 475 (512)
++.+..||+. ++..-...... +.....++..+.++++|+.||.++.||.++|+.
T Consensus 433 g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 433 GLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT----IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp SSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS----SCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC----CccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 3779999997 55554444322 122234556788999999999999999999999
Q ss_pred EEeccccCCC-eEEEEEcCCCC-eEEEE
Q 010362 476 EHLMKVHEKD-VIGVTHHPHRN-LLATY 501 (512)
Q Consensus 476 ~~~~~~h~~~-v~~v~~~p~~~-~l~s~ 501 (512)
+..++.+.+. ..-+.|..+|+ ++++.
T Consensus 509 lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 509 LWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred ceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 9887654332 23466777876 44443
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.32 E-value=3.5e-11 Score=112.10 Aligned_cols=279 Identities=12% Similarity=0.012 Sum_probs=175.9
Q ss_pred cccccccCccccceEEEecCcCceEEEEECCCCCEEEEEe----------CCCeEEEEEcCCCeeeccccccccceeecc
Q 010362 193 KQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCS----------FDGFIEVWDYLSGKLKKDLQYQADETFMMH 262 (512)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h 262 (512)
...+.|....+...++..+.. + .+.|+|||++++++. .++.|.+||..+++....+.......+. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~-~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS-V 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC-B
T ss_pred eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccc-c
Confidence 344667778888888987765 3 799999999999886 3689999999999988776532000000 0
Q ss_pred CcceeEEEEcCCCCeEEEEeC--CCeEEE--EEccCCeeeEEeccccccCeEEEEEecCC-CEEEEEeCCCcEEEEeCCC
Q 010362 263 DETVLCIEFSRDSEMLASGSQ--DGKIKV--WRIRSGQCLRRLERAHSEGVTSLVFSRDG-SQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 263 ~~~v~~l~~s~~~~~l~s~~~--dg~i~v--wd~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~i~d~~~ 337 (512)
......++++|||++++++.. +..+.+ +|..+ +..+..+ +. ....|++ ..+++.+.||.+.+.|+.+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~--~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA--SC---FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS--SC---CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC--Cc---eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 134568999999999999875 457888 88877 4444321 11 1233444 3445566788888888876
Q ss_pred -----CceeEE----eeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eeeecCCCCCC-CCC---CceeEEE
Q 010362 338 -----GKLLKE----FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD--CLQTFKPPPPL-RGG---DASVNSV 402 (512)
Q Consensus 338 -----~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~-~~~---~~~i~~~ 402 (512)
++.... +.....+. . .+++..++..+. +.+.+.|..+.. ....+...... ... ......+
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v 269 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMV 269 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCE
T ss_pred ccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceee
Confidence 332211 11112232 3 566666666666 899999987542 22222211000 000 0111226
Q ss_pred EEcCCCCCeEEEEc---C-----CCcEEEEecCC-eEEEEeeCCcccCCcEEEEEECCCCCE-EEEEe-CCCeEEEEEcC
Q 010362 403 HLFPKNPDHIVVCN---K-----TSSIYIMTLQG-QVVKSFSSGKREGGDFVAACVSPKGEW-IYCVG-EDRNLYCFSHQ 471 (512)
Q Consensus 403 ~~~~~~~~~l~~~~---~-----~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~-l~~g~-~dg~i~iwd~~ 471 (512)
.++|++..++++.. . ++.+.++|... +.+..+..+. ....++++|||++ +++.. .++.|.++|+.
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 78998855555544 2 24566999984 4444443322 4678999999985 45555 58999999999
Q ss_pred CCeeEEeccccCCCeEEEEEcC
Q 010362 472 SGKLEHLMKVHEKDVIGVTHHP 493 (512)
Q Consensus 472 ~~~~~~~~~~h~~~v~~v~~~p 493 (512)
+++.+..+.... ....+++.+
T Consensus 346 t~kvv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 346 SDQDQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp SCEEEEECCCCS-CCCEEECCC
T ss_pred CCcEEEEEECCC-CCCEEEeec
Confidence 999999987553 344666654
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.31 E-value=4.9e-10 Score=104.18 Aligned_cols=262 Identities=16% Similarity=0.112 Sum_probs=173.4
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 293 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~ 293 (512)
..+.++...++|. +..++.+ |..+|. +++....... ........... +..+..++.++.+..+|..
T Consensus 60 ~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~--------~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~ 125 (330)
T 3hxj_A 60 IIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDT--------KKAIVSDFTIF--EDILYVTSMDGHLYAINTD 125 (330)
T ss_dssp EEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-------------CCEEEE--TTEEEEECTTSEEEEECTT
T ss_pred CcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEEC--------CCCcccCceEE--CCEEEEEecCCEEEEEcCC
Confidence 3456777777775 4445544 888885 5554433321 11122222333 4567778889999999988
Q ss_pred CCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEE
Q 010362 294 SGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVK 373 (512)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 373 (512)
++...... .....+.++...+++. ++.++.++.+..+|.. ++....+......+.++...+++...+ ++ +.|.
T Consensus 126 -g~~~~~~~-~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~ 198 (330)
T 3hxj_A 126 -GTEKWRFK-TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVY 198 (330)
T ss_dssp -SCEEEEEE-CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEE
T ss_pred -CCEEEEEc-CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEE
Confidence 77766654 3444566677776665 6677888999999998 888777776666778888888877544 44 7799
Q ss_pred EEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCC
Q 010362 374 VWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKG 453 (512)
Q Consensus 374 iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 453 (512)
.+| .+++........ ...+.++...+++ .+.+++.++.+..++..+.....+..... .+..+.+.++|
T Consensus 199 ~~d-~~g~~~~~~~~~------~~~~~~~~~~~~g--~l~v~t~~~gl~~~~~~g~~~~~~~~~~~---~~~~~~~~~~g 266 (330)
T 3hxj_A 199 AIN-PDGTEKWNFYAG------YWTVTRPAISEDG--TIYVTSLDGHLYAINPDGTEKWRFKTGKR---IESSPVIGNTD 266 (330)
T ss_dssp EEC-TTSCEEEEECCS------SCCCSCCEECTTS--CEEEEETTTEEEEECTTSCEEEEEECSSC---CCSCCEECTTS
T ss_pred EEC-CCCcEEEEEccC------CcceeceEECCCC--eEEEEcCCCeEEEECCCCCEeEEeeCCCC---ccccceEcCCC
Confidence 999 777666554422 2345566666543 56677778888888877776655544321 12234455555
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 454 EWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 454 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
.|+.++.+|.|+.+|. +++.+..+......+.++...+++.++ .++.+|.+++..
T Consensus 267 -~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~ 321 (330)
T 3hxj_A 267 -TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIY-FGTRNGKFYALF 321 (330)
T ss_dssp -CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEE-EECTTSCEEEEE
T ss_pred -eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEE-EEcCCCeEEEEe
Confidence 5777888889999996 777776666556667788887777654 578899988754
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.30 E-value=5.7e-10 Score=113.68 Aligned_cols=267 Identities=10% Similarity=0.037 Sum_probs=171.6
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeE-EEEcCCCCeEEEEeC------CCeEEEEEccCCe
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLC-IEFSRDSEMLASGSQ------DGKIKVWRIRSGQ 296 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~s~~~~~l~s~~~------dg~i~vwd~~~~~ 296 (512)
++..+++++.|+.|..+|..+|+............ ....+.+ ... .+..+++++. +|.|+.+|..+|+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~---~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQK---GSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGE 201 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCC---SSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcC---cCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCc
Confidence 46688888999999999999999876654320000 0011111 011 1345555543 6899999999999
Q ss_pred eeEEecccccc-------------------------------CeEEEEEecCCCEEEEEeCCC-----------------
Q 010362 297 CLRRLERAHSE-------------------------------GVTSLVFSRDGSQILSTSFDS----------------- 328 (512)
Q Consensus 297 ~~~~~~~~~~~-------------------------------~i~~~~~~~~~~~l~~~~~dg----------------- 328 (512)
.+.++...... ....++++|++..++.++.++
T Consensus 202 ~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~ 281 (677)
T 1kb0_A 202 RKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLY 281 (677)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred EEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCee
Confidence 98877531111 113578889999999887664
Q ss_pred --cEEEEeCCCCceeEEeeC--Cc-------cceeEEEEcCCC---CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCC-
Q 010362 329 --TARIHGLKSGKLLKEFRG--HS-------SYVNDAIFTNDG---SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLR- 393 (512)
Q Consensus 329 --~v~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~- 393 (512)
.|..+|.++|+.+..++. |. ....-+....+| ..++.++.+|.++++|.++++.+..+.......
T Consensus 282 ~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~ 361 (677)
T 1kb0_A 282 LASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA 361 (677)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence 499999999999988764 21 112223333467 678999999999999999999877654321100
Q ss_pred ----CCCce------------------------eEEEEEcCCCCCeEEEEcC----------------------------
Q 010362 394 ----GGDAS------------------------VNSVHLFPKNPDHIVVCNK---------------------------- 417 (512)
Q Consensus 394 ----~~~~~------------------------i~~~~~~~~~~~~l~~~~~---------------------------- 417 (512)
....+ -..++++|+. .++++...
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~-~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 440 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT-GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW 440 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT-TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC-CEEEEeChhcceeeeccccccccccccccccccccc
Confidence 00000 1245677776 44444322
Q ss_pred ---------------CCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccc
Q 010362 418 ---------------TSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV 481 (512)
Q Consensus 418 ---------------~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 481 (512)
.+.+..||.. ++......... +.....++.++..++.++.||.+++||..+|+.+..+..
T Consensus 441 ~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~----~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 441 NTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS----PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp CCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS----SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC----CCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 2679999987 55554443321 223344556788899999999999999999999988874
Q ss_pred cC-CCeEEEEEcCCCCeEEE
Q 010362 482 HE-KDVIGVTHHPHRNLLAT 500 (512)
Q Consensus 482 h~-~~v~~v~~~p~~~~l~s 500 (512)
.. ....-+.|.++|+.+++
T Consensus 517 ~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 517 GTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp SSCCCSCCEEEEETTEEEEE
T ss_pred CCCcccCCEEEEeCCEEEEE
Confidence 43 22334566678764443
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.28 E-value=2.6e-08 Score=89.41 Aligned_cols=255 Identities=10% Similarity=0.049 Sum_probs=161.1
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe-CCCeEEEEEccCCeeeEEeccc
Q 010362 226 QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-QDGKIKVWRIRSGQCLRRLERA 304 (512)
Q Consensus 226 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~ 304 (512)
.+|..+. .+.|+.++++...... +.. ...+......+.+++|++++..|..+. .++.|..+++..+.....+. .
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~-~~~--~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~ 76 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKK-TEA--KAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR-Q 76 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCG-GGC--EEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC-T
T ss_pred cEEEEEc-CCeEEEEEecCccccc-ccc--eeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE-C
Confidence 4555555 3578888887654221 100 001111234678999999766555554 56899999987655433332 2
Q ss_pred cccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC---CCcEEEEeCCCC
Q 010362 305 HSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS---DCTVKVWDLKST 380 (512)
Q Consensus 305 ~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~ 380 (512)
.......++++|++..++.+. ..+.|.++++..................++++|++..|+.+.. .+.|..+++...
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 235688999999766666554 4678999998644322222222245789999997666655554 368888887643
Q ss_pred ceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe
Q 010362 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 460 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 460 (512)
. ...+.. ........++++|++..++++....+.|..++..+.....+... ......++.. +..++.+.
T Consensus 157 ~-~~~~~~-----~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~---~~~P~gi~~d--~~~lyva~ 225 (267)
T 1npe_A 157 N-RRILAQ-----DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG---LQYPFAVTSY--GKNLYYTD 225 (267)
T ss_dssp C-CEEEEC-----TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC---CCSEEEEEEE--TTEEEEEE
T ss_pred C-cEEEEE-----CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC---CCCceEEEEe--CCEEEEEE
Confidence 2 222211 11235788999998767777888889999999986554444322 2234556654 45555555
Q ss_pred -CCCeEEEEEcCCCeeEEeccccC-CCeEEEEEcCCCC
Q 010362 461 -EDRNLYCFSHQSGKLEHLMKVHE-KDVIGVTHHPHRN 496 (512)
Q Consensus 461 -~dg~i~iwd~~~~~~~~~~~~h~-~~v~~v~~~p~~~ 496 (512)
.++.|..+|..+++.+..+.... ....++++.|++.
T Consensus 226 ~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 226 WKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 67899999999999888876443 2477888888764
No 237
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=5.2e-10 Score=104.61 Aligned_cols=205 Identities=13% Similarity=0.127 Sum_probs=135.0
Q ss_pred cCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCceeEEee-------CCccceeEEEEcCCCCEEEEEeC-----CCcE
Q 010362 307 EGVTSLVFSRDGSQILSTSF--DSTARIHGLKSGKLLKEFR-------GHSSYVNDAIFTNDGSRVVTASS-----DCTV 372 (512)
Q Consensus 307 ~~i~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~-----dg~i 372 (512)
..+..++++|+|+.+++... ++.+++|.+.+++. ..+. .+-..+.+++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999998888642 34244444434543 3221 24457899999999876555433 5789
Q ss_pred EEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc---CCCcEEEEecCCeEEEEeeCCc----c------
Q 010362 373 KVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN---KTSSIYIMTLQGQVVKSFSSGK----R------ 439 (512)
Q Consensus 373 ~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~~~~i~~~~~~~~~~~~~~~~~----~------ 439 (512)
.+||+.+++....+..+............+++.|++...+++.. .++.|.+||............. .
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999998877766544322233445688999987645556555 6789999999743333322110 0
Q ss_pred -----------------cCCcEEEEEECCCCCEEEEEeCCC-eEEEEEcC---CCe-----eEE--eccccCCCeEEEEE
Q 010362 440 -----------------EGGDFVAACVSPKGEWIYCVGEDR-NLYCFSHQ---SGK-----LEH--LMKVHEKDVIGVTH 491 (512)
Q Consensus 440 -----------------~~~~~~~~~~s~~g~~l~~g~~dg-~i~iwd~~---~~~-----~~~--~~~~h~~~v~~v~~ 491 (512)
-...+..++++|+|+.|+++..++ .++.++.. .+. ... ...++......+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 002357899999999999888665 56666532 111 000 11134445678999
Q ss_pred cCCCCeEEEEECCCeEEEecC
Q 010362 492 HPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 492 ~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+++|.++++...++.|.+||+
T Consensus 256 d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CTTCCEEEEEGGGTEEEEEET
T ss_pred CCCCCEEEEccCCCeEEEEEC
Confidence 999999999989999999986
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.19 E-value=4.9e-10 Score=104.20 Aligned_cols=258 Identities=16% Similarity=0.160 Sum_probs=164.6
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeee
Q 010362 219 ARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCL 298 (512)
Q Consensus 219 ~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~ 298 (512)
+.+..+|. +.+++.++.|..|| .+++....... +...+.++...+++. +..++.+ +..+|. +++..
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~--------~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~ 90 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKS--------GEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEK 90 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCG--------GGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGG
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEec--------CCCcccceEEecCCc-EEEecCc--EEEECC-CCcEE
Confidence 34445554 56677788999999 78876554331 334567777777775 4445444 888885 66654
Q ss_pred EEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010362 299 RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLK 378 (512)
Q Consensus 299 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 378 (512)
..+. ..........+. +..+.+++.++.+..+|.. ++.......+...+.++...+++. ++.++.++.|..+|..
T Consensus 91 ~~~~-~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 91 WRFD-TKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp GGSC-C-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT
T ss_pred EEEE-CCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC
Confidence 4443 122222233333 5578888889999999988 877777766666677778877776 6667778999999998
Q ss_pred CCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEE
Q 010362 379 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC 458 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 458 (512)
++....+... ...+.++...+++ .+.+++ +.+..+|..+......... ...+.++...++|. |++
T Consensus 166 -g~~~~~~~~~------~~~~~~~~~d~~g--~l~v~t--~~l~~~d~~g~~~~~~~~~---~~~~~~~~~~~~g~-l~v 230 (330)
T 3hxj_A 166 -GTEKWRFKTN------DAITSAASIGKDG--TIYFGS--DKVYAINPDGTEKWNFYAG---YWTVTRPAISEDGT-IYV 230 (330)
T ss_dssp -SCEEEEEECS------SCCCSCCEECTTC--CEEEES--SSEEEECTTSCEEEEECCS---SCCCSCCEECTTSC-EEE
T ss_pred -CCEeEEEecC------CCceeeeEEcCCC--EEEEEe--CEEEEECCCCcEEEEEccC---CcceeceEECCCCe-EEE
Confidence 7766555432 1234444554443 455555 8899999556555444432 23456677788875 566
Q ss_pred EeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 459 VGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 459 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
++.++.+..+|. +++.+..+......+.++...+++. |..++.+|.|..+|+
T Consensus 231 ~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 231 TSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp EETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred EcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 777888888874 5666655554444445566655554 556777888888775
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.18 E-value=6e-12 Score=118.82 Aligned_cols=178 Identities=13% Similarity=0.096 Sum_probs=98.9
Q ss_pred CCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCcc-cee
Q 010362 274 DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS-YVN 352 (512)
Q Consensus 274 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~-~v~ 352 (512)
++..+++++.||.|+.||..+|+.+.++.. ..+.+..+..++..+++++.||.|+.||..+++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 577899999999999999999999988863 4555555666777888888999999999999988776654421 111
Q ss_pred -EEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEE
Q 010362 353 -DAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 431 (512)
Q Consensus 353 -~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 431 (512)
+..+. .+..+++++.|+.++.||.++++....+.... .
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----------~------------------------------ 123 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----------A------------------------------ 123 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC-----------------------------------------------------
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----------c------------------------------
Confidence 11111 34567788889999999999887655543110 0
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCC---CeEEEEECCCeEE
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHR---NLLATYGEDCTMK 508 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~---~~l~s~~~dg~i~ 508 (512)
..++|++..+++++.|+.|+.||..+|+.+..+..+. .....+.++. ..+++++.||.|.
T Consensus 124 ---------------~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~ 186 (369)
T 2hz6_A 124 ---------------DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVV 186 (369)
T ss_dssp ------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEE
T ss_pred ---------------ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEE
Confidence 0112356667777777888888887777655443221 1122233321 4566677788888
Q ss_pred EecC
Q 010362 509 LWKP 512 (512)
Q Consensus 509 iW~~ 512 (512)
.||+
T Consensus 187 a~d~ 190 (369)
T 2hz6_A 187 TVDS 190 (369)
T ss_dssp EECT
T ss_pred EEEC
Confidence 8774
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.16 E-value=4e-09 Score=102.20 Aligned_cols=235 Identities=11% Similarity=0.085 Sum_probs=164.1
Q ss_pred CCCCEEEEEeC-CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEE-c-CCCCeEEEEe-----------------
Q 010362 223 PDGQFLVSCSF-DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF-S-RDSEMLASGS----------------- 282 (512)
Q Consensus 223 ~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-s-~~~~~l~s~~----------------- 282 (512)
+||+++++... ++.|.+.|+.+.+....+... ....+..+++ + |+++++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip-------~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIP-------NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECS-------SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCC-------CCCCCcceeeeecCCCcEEEEecccccccCCCCccccccc
Confidence 48888887764 557999999999877644321 2345778887 5 8999998885
Q ss_pred -CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCC---------------------------------
Q 010362 283 -QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS--------------------------------- 328 (512)
Q Consensus 283 -~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------------------------- 328 (512)
.++.+.+.|..+.+...++..+ +....++++|+|+++++.+.+.
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred ccCceEEEEECCCCeEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 2468999999999988888632 2567788999999999888553
Q ss_pred -----cEEEEeCCC--Cce-eEEeeCCccceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCc------------eeeecC
Q 010362 329 -----TARIHGLKS--GKL-LKEFRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKSTD------------CLQTFK 387 (512)
Q Consensus 329 -----~v~i~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~------------~~~~~~ 387 (512)
.|.+.|.++ ++. +..+... ....++.++|||+++++++ .+.+|.++|+.+.+ ......
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred eeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC
Confidence 477778776 444 4455432 3467899999999887765 57899999998653 111211
Q ss_pred CCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-----------eEEEEeeCCcccCCcE--EEEEECCCCC
Q 010362 388 PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-----------QVVKSFSSGKREGGDF--VAACVSPKGE 454 (512)
Q Consensus 388 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~--~~~~~s~~g~ 454 (512)
.......++|+|++ ..+++...++.+..|++.. ..+..+..+...+... .....+|||+
T Consensus 329 -------vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk 400 (595)
T 1fwx_A 329 -------LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND 400 (595)
T ss_dssp -------CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred -------CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence 23467889999999 7888899999999999874 2334444332111000 1124589999
Q ss_pred EEEEEeC---CCe----------EEEEEcCCCee
Q 010362 455 WIYCVGE---DRN----------LYCFSHQSGKL 475 (512)
Q Consensus 455 ~l~~g~~---dg~----------i~iwd~~~~~~ 475 (512)
+|++... |+. -.++|+..+++
T Consensus 401 ~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 401 WLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp EEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred EEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 9999873 332 27899866553
No 241
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.15 E-value=3.4e-07 Score=95.77 Aligned_cols=281 Identities=10% Similarity=0.109 Sum_probs=181.7
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC
Q 010362 216 AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG 295 (512)
Q Consensus 216 v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~ 295 (512)
|.++...++|.+.+ |+.++-|..|+..+++...... ..+...|.++...+++.+.+ |+.++-+..||..++
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~-------~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~ 245 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIP-------ILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTK 245 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC-----------CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTT
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecC-------CCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCC
Confidence 88888888886555 6655568899987765432211 01346788998888776554 554445899998877
Q ss_pred eeeEEecc------ccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeC-------CccceeEEEEcCCCCE
Q 010362 296 QCLRRLER------AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRG-------HSSYVNDAIFTNDGSR 362 (512)
Q Consensus 296 ~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~ 362 (512)
+....... -....|.++...++|.+ ..|+.+ -|.+||..++........ ....|.++...++|.
T Consensus 246 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~- 322 (795)
T 4a2l_A 246 EIKNYLHSPSNPKSISSNYIRSLAMDSQNRL-WIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG- 322 (795)
T ss_dssp EEEEECCCTTCTTSCSCSBEEEEEECTTSCE-EEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-
T ss_pred eEEEeecCCCCccccCCCeEEEEEEcCCCCE-EEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-
Confidence 64332211 11356999998888764 455555 688999876654332211 235699999999887
Q ss_pred EEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCc----
Q 010362 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK---- 438 (512)
Q Consensus 363 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---- 438 (512)
|..|+.++-|..|+..+..............-....|.++...+++ .+.+|+.++-+..++........+....
T Consensus 323 lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~ 400 (795)
T 4a2l_A 323 MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQRFTSYTLQEDESA 400 (795)
T ss_dssp EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTS--CEEEEESSSCEEEECTTTCCEEEECCC-----
T ss_pred EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCC--CEEEEECCCCeEEEcCCCCcEEEEecCCCCcc
Confidence 5667777779999876554322111111111124568888876654 5677888888999998865555443221
Q ss_pred --ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecc----ccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 439 --REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK----VHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 439 --~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.....|.+++..++|+.|..|+.++-|..||..+++...... .+...|.++...+++.+.+.. .+| +.+|+|
T Consensus 401 ~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~ 478 (795)
T 4a2l_A 401 RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNP 478 (795)
T ss_dssp -CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEET
T ss_pred cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeC
Confidence 123568899998999867788887889999998876544322 234679999998888866644 454 666654
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.15 E-value=1.3e-08 Score=88.28 Aligned_cols=205 Identities=14% Similarity=0.147 Sum_probs=139.9
Q ss_pred ccceEEEecCcCceEEEEECCCCCEEEEEeCCC--eEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEE
Q 010362 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDG--FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLAS 280 (512)
Q Consensus 203 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s 280 (512)
+..+++....+.-...+.|+ ++.++.+.+.+| .|+++|+.+++....+... .........++++.|..
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---------~~~FgeGit~~g~~ly~ 101 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---------KRYFGEGISDWKDKIVG 101 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC---------TTCCEEEEEEETTEEEE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC---------CccceeEEEEeCCEEEE
Confidence 34445543344445789998 677777777766 9999999999988766532 22222222233445555
Q ss_pred Ee-CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCC--c---cceeEE
Q 010362 281 GS-QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH--S---SYVNDA 354 (512)
Q Consensus 281 ~~-~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~--~---~~v~~~ 354 (512)
.. .++.+.+||..+.+.+.++.... ....++++++.|+.+..++.|.++|..+.+.+.++... . ..++.+
T Consensus 102 ltw~~~~v~v~D~~t~~~~~ti~~~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNEL 177 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVRSFNYDG----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNEL 177 (262)
T ss_dssp EESSSSEEEEEETTTCCEEEEEECSS----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEE
T ss_pred EEeeCCEEEEEECccCcEEEEEECCC----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccccccee
Confidence 44 58899999999999999987432 22334467777877776788999999999988887642 2 234557
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCC------CCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 355 IFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL------RGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 355 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
.|. +|...+..-.++.|.+.|.++++....+....-. .......+.++++|....++++|-.=..++
T Consensus 178 e~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ 250 (262)
T 3nol_A 178 EWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVF 250 (262)
T ss_dssp EEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred EEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceE
Confidence 776 6665555556889999999999998887654211 112346789999999877777776555444
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=6.7e-09 Score=105.74 Aligned_cols=286 Identities=11% Similarity=0.098 Sum_probs=175.7
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeecc-C-cce-eEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEE
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMH-D-ETV-LCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR 300 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h-~-~~v-~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 300 (512)
.+..+++++.++.|.-+|..+|+.+.............+ . ..+ ..+++ .+..+++++.|+.|..+|..+|+.+.+
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 356777788899999999999998766543211100000 0 001 11222 255788888899999999999999888
Q ss_pred eccccccCeEEEEEec--CCCEEEEEeC------CCcEEEEeCCCCceeEEeeCCc------------------------
Q 010362 301 LERAHSEGVTSLVFSR--DGSQILSTSF------DSTARIHGLKSGKLLKEFRGHS------------------------ 348 (512)
Q Consensus 301 ~~~~~~~~i~~~~~~~--~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~~------------------------ 348 (512)
+..........+..+| .+..+++++. +|.|+.+|.++|+.+..+....
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 7632111000010111 1345555543 5899999999999998875311
Q ss_pred -------cceeEEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCceeeecCCCCC-CCC--CCcee
Q 010362 349 -------SYVNDAIFTNDGSRVVTASSDC-------------------TVKVWDLKSTDCLQTFKPPPP-LRG--GDASV 399 (512)
Q Consensus 349 -------~~v~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~-~~~--~~~~i 399 (512)
.....++++|+...++.++.++ .|..+|.++++....+..... ... ...+.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~ 302 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI 302 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc
Confidence 0112468888888888887766 399999999998887764311 000 11222
Q ss_pred EEEEEcCCCC--CeEEEEcCCCcEEEEecC-CeEEEEeeCCc---------ccCC------------------------c
Q 010362 400 NSVHLFPKNP--DHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK---------REGG------------------------D 443 (512)
Q Consensus 400 ~~~~~~~~~~--~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~---------~~~~------------------------~ 443 (512)
....+..++. ..++.++.+|.++++|.. |+.+....... .... .
T Consensus 303 ~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~ 382 (668)
T 1kv9_A 303 TLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHN 382 (668)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSC
T ss_pred EEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccC
Confidence 2222222331 368889999999999987 55543222111 0000 0
Q ss_pred EEEEEECCCCCEEEEEe------------------------------------CCCeEEEEEcCCCeeEEeccccCCCeE
Q 010362 444 FVAACVSPKGEWIYCVG------------------------------------EDRNLYCFSHQSGKLEHLMKVHEKDVI 487 (512)
Q Consensus 444 ~~~~~~s~~g~~l~~g~------------------------------------~dg~i~iwd~~~~~~~~~~~~h~~~v~ 487 (512)
...++++|+...+++.. .+|.|..||..+|+.+-....+ .++.
T Consensus 383 w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~ 461 (668)
T 1kv9_A 383 WHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWN 461 (668)
T ss_dssp SSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCC
T ss_pred CCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCc
Confidence 11257777777666421 2488999999999988776543 2333
Q ss_pred EEEEcCCCCeEEEEECCCeEEEecC
Q 010362 488 GVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 488 ~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
...+...+.+++.++.||.++.||+
T Consensus 462 ~~~~~t~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 462 GGTLSTAGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEET
T ss_pred CceeEeCCCEEEEECCcccchhhhh
Confidence 3344456788888999999999985
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.12 E-value=1.5e-06 Score=90.99 Aligned_cols=285 Identities=11% Similarity=0.133 Sum_probs=179.3
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 293 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~ 293 (512)
..|.++...++|.+ ..|+.++-|..|+..++............. -....|.++...++|. |..|+.++-|..||..
T Consensus 310 ~~i~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~--l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~ 385 (795)
T 4a2l_A 310 RSVRSIFMDSQGGM-WLGTYFGGLNYYHPIRNRFKNIRNIPYKNS--LSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPI 385 (795)
T ss_dssp SCEEEEEECTTSCE-EEEESSSCEEEECGGGGSSEEECCCTTSSS--CSCSSEEEEEECTTSC-EEEEESSSCEEEECTT
T ss_pred CcEEEEEEeCCcCE-EEEECCCCeEEeCCCcccceEEcCCCCCCC--CCCCeeEEEEECCCCC-EEEEECCCCeEEEcCC
Confidence 56899999998874 457777778899876554321110000000 1345699999988876 5557777779999988
Q ss_pred CCeeeEEecc-------ccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee----CCccceeEEEEcCCCCE
Q 010362 294 SGQCLRRLER-------AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR----GHSSYVNDAIFTNDGSR 362 (512)
Q Consensus 294 ~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~ 362 (512)
++........ .....|.++...+++..|.+|+.++-+..+|..+++...... .....|.++...++|..
T Consensus 386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l 465 (795)
T 4a2l_A 386 TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNL 465 (795)
T ss_dssp TCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCE
T ss_pred CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCE
Confidence 7764332211 123578999988888757778887889999988776433221 13456889998888875
Q ss_pred EEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeC----Cc
Q 010362 363 VVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS----GK 438 (512)
Q Consensus 363 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~----~~ 438 (512)
.+. +.+ .+.+||..+++.................|.++...+++ . +.+++. +.+..++...... .+.. ..
T Consensus 466 wig-t~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g-~-lWigt~-~Gl~~~~~~~~~~-~~~~~~~~~~ 539 (795)
T 4a2l_A 466 WLG-TLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK-R-LWIGGE-EGLSVFKQEGLDI-QKASILPVSN 539 (795)
T ss_dssp EEE-ESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC-C-EEEEES-SCEEEEEEETTEE-EECCCSCSCG
T ss_pred EEE-ecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC-C-EEEEeC-CceEEEeCCCCeE-EEecCCCCCC
Confidence 554 444 48899988765433221100001123568888877665 3 444445 5688888875544 3321 11
Q ss_pred ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecc--c-cCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 439 REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK--V-HEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 439 ~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~--~-h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
.....+.++..+++|.+.++ +.. -+..||..+++....-. + ....|.++...++|.+.+++ ..| |..|+|
T Consensus 540 l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~G-l~~~~~ 612 (795)
T 4a2l_A 540 VTKLFTNCIYEASNGIIWVG-TRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST-NRG-ISCFNP 612 (795)
T ss_dssp GGGSCEEEEEECTTSCEEEE-ESS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE-TTE-EEEEET
T ss_pred CCCCeeEEEEECCCCCEEEE-eCC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc-CCc-eEEEcC
Confidence 22346888999999985554 444 68889988776543221 1 23568899998888877655 444 555554
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.11 E-value=3.9e-08 Score=84.55 Aligned_cols=204 Identities=10% Similarity=0.086 Sum_probs=137.7
Q ss_pred ccceEEEecCcCceEEEEECCCCCEEEEEeCCC--eEEEEEcCCCeeeccccccccceeeccCccee--EEEEcCCCCeE
Q 010362 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDG--FIEVWDYLSGKLKKDLQYQADETFMMHDETVL--CIEFSRDSEML 278 (512)
Q Consensus 203 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~--~l~~s~~~~~l 278 (512)
+...++......-...+.|++ +.+..+.+.+| .|+.+|+.+++....+... .... .++.. .++..
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~---------~~~fgeGi~~~-~~~ly 78 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP---------PPYFGAGIVAW-RDRLI 78 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC---------TTCCEEEEEEE-TTEEE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC---------CCcceeEEEEe-CCEEE
Confidence 344455434445567899987 55666666554 8999999999988766432 1222 23333 23344
Q ss_pred EEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCc-----cceeE
Q 010362 279 ASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS-----SYVND 353 (512)
Q Consensus 279 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~-----~~v~~ 353 (512)
+..-.++.+.+||..+.+.+.++..+. .-..++ +++..|+.+..++.|.++|..+.+.+.++.-.. ..++.
T Consensus 79 ~ltw~~~~v~v~D~~tl~~~~ti~~~~--~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 79 QLTWRNHEGFVYDLATLTPRARFRYPG--EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp EEESSSSEEEEEETTTTEEEEEEECSS--CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred EEEeeCCEEEEEECCcCcEEEEEeCCC--CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccccee
Confidence 444568899999999999999987432 223444 567777777778999999999999888776422 23556
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCC-------CCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 354 AIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL-------RGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 354 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
+.|. +|...+..-.+..|.+.|.++++....+....-. .......+.+++.|.+..++++|-.=..++
T Consensus 155 Le~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~ 229 (243)
T 3mbr_X 155 LEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLY 229 (243)
T ss_dssp EEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred eEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEE
Confidence 6665 5655555546779999999999988877643211 112346789999999877777776555544
No 246
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.07 E-value=2.4e-08 Score=101.86 Aligned_cols=281 Identities=11% Similarity=0.096 Sum_probs=159.0
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC-C
Q 010362 218 CARFSP-DGQFLVSCSFDG-----------FIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ-D 284 (512)
Q Consensus 218 ~~~~s~-~~~~l~sg~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-d 284 (512)
++++.| +|++++.|+.++ .+.+||..+++........ ..+.....++++.+++++++.|+. +
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~-----~~~~~~~~~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV-----TKHDMFCPGISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE-----CSCCCSSCEEEECTTSCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC-----CCCCCccccccCCCCCCEEEeCCCCC
Confidence 556677 888889887543 5889998887643321110 112233445778899999999984 4
Q ss_pred CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CC-----CcEEEEeCCCCceeEEe----eCCccceeEE
Q 010362 285 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FD-----STARIHGLKSGKLLKEF----RGHSSYVNDA 354 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-----g~v~i~d~~~~~~~~~~----~~~~~~v~~~ 354 (512)
+.+.+||..+++....-.......-.+++..++++.++.|+ .+ ..+.+||..+.+-...- ......-...
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~ 344 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQG 344 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTG
T ss_pred CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccc
Confidence 58999999887644322211222234556667899999988 34 56899999776533210 0000000001
Q ss_pred EEcCCCCEEEEEeCCC---------cEEEEeCCCCceeeecCCCCCC---CCCCceeEEEEEcCCCCCeEEEEcCCC---
Q 010362 355 IFTNDGSRVVTASSDC---------TVKVWDLKSTDCLQTFKPPPPL---RGGDASVNSVHLFPKNPDHIVVCNKTS--- 419 (512)
Q Consensus 355 ~~~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~l~~~~~~~--- 419 (512)
.+..++..++.++.+| .+..||..+............. ......-.++.+...+..++++|+.++
T Consensus 345 ~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~ 424 (656)
T 1k3i_A 345 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD 424 (656)
T ss_dssp GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS
T ss_pred eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC
Confidence 1223445555555443 4678888766533221111000 000111233444344546777776432
Q ss_pred --------cEEEEecCCeEEEEee-CCcccCCcEEEEEECCCCCEEEEEeCC-----------CeEEEEEcCCCeeEEe-
Q 010362 420 --------SIYIMTLQGQVVKSFS-SGKREGGDFVAACVSPKGEWIYCVGED-----------RNLYCFSHQSGKLEHL- 478 (512)
Q Consensus 420 --------~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~g~~l~~g~~d-----------g~i~iwd~~~~~~~~~- 478 (512)
.+.+||.......... ..........+++..|+|+.++.|+.+ ..+.+||..+.+-...
T Consensus 425 ~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 425 SDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp SBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred CCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 5777887755444443 111112223456678899999999854 4689999987664332
Q ss_pred -ccccCCCeEEEEEcCCCCeEEEEEC
Q 010362 479 -MKVHEKDVIGVTHHPHRNLLATYGE 503 (512)
Q Consensus 479 -~~~h~~~v~~v~~~p~~~~l~s~~~ 503 (512)
+........+..+.|++++++.||.
T Consensus 505 ~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 505 PNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCccccccHhhcCCCcEEEecCCC
Confidence 2222222334556789999999885
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.07 E-value=9.4e-08 Score=84.03 Aligned_cols=202 Identities=9% Similarity=0.071 Sum_probs=137.9
Q ss_pred ceeEEEEcCCCCeEEEEeC--CCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCcee
Q 010362 265 TVLCIEFSRDSEMLASGSQ--DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLL 341 (512)
Q Consensus 265 ~v~~l~~s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~ 341 (512)
....++|+|++.+.++.+. ++.|+++|+.+++.+..+..+.......+++. ++.++.++ .++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 3689999998755555443 57999999999999888753332233455554 55665555 5789999999999999
Q ss_pred EEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcE
Q 010362 342 KEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSI 421 (512)
Q Consensus 342 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i 421 (512)
.++..... ....+++||+.++++..++.|.++|..+.+....+..... ...-...+.+.+. ++ .+++....++.|
T Consensus 100 ~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~-~~p~~~~nele~~-dg-~lyvn~~~~~~V 174 (266)
T 2iwa_A 100 KNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN-GHRVIRLNELEYI-NG-EVWANIWQTDCI 174 (266)
T ss_dssp EEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET-TEECCCEEEEEEE-TT-EEEEEETTSSEE
T ss_pred EEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC-CcccccceeEEEE-CC-EEEEecCCCCeE
Confidence 88864311 1234566788777777789999999999888777663321 0011135667776 33 566666678899
Q ss_pred EEEecC-CeEEEEeeCCc----------ccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCC
Q 010362 422 YIMTLQ-GQVVKSFSSGK----------REGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSG 473 (512)
Q Consensus 422 ~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~ 473 (512)
.+.|.. ++....+.... ........++++|+++.+++++ ..+.++..++...
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999997 55555554321 1123568999999987665555 7788988887654
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.06 E-value=3.9e-08 Score=90.92 Aligned_cols=234 Identities=9% Similarity=0.055 Sum_probs=151.7
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEecc-------------------ccccCeEEEEEecCCCEEEEE
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER-------------------AHSEGVTSLVFSRDGSQILST 324 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------------------~~~~~i~~~~~~~~~~~l~~~ 324 (512)
....+++|.+++++++++..++.|..|+..++... .+.. .....+..+++.++...|+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34567889999987888888999999998765432 2210 011357899999833456666
Q ss_pred eCCCcEEEEeCCCCceeEEeeC-----CccceeEEEEcC-CCCEEEEEeC-----------------CCcEEEEeCCCCc
Q 010362 325 SFDSTARIHGLKSGKLLKEFRG-----HSSYVNDAIFTN-DGSRVVTASS-----------------DCTVKVWDLKSTD 381 (512)
Q Consensus 325 ~~dg~v~i~d~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~~~ 381 (512)
...+.+..+|..++.. ..+.. .......+++.+ +|+..++... +|.|..||..+++
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 5556688888765532 22221 113478899999 9987666432 3678888887665
Q ss_pred eeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe---EEEEeeCCcccCCcEEEEEECCCCCEEEE
Q 010362 382 CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ---VVKSFSSGKREGGDFVAACVSPKGEWIYC 458 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 458 (512)
...... .......++++|++..++++-...+.|..+++.+. ....+... .+ ...++++++|++.++
T Consensus 177 ~~~~~~-------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 177 TTLLLK-------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---PN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp EEEEEE-------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---SS-EEEEEECTTSCEEEE
T ss_pred EEEecc-------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---CC-CCCeEECCCCCEEEE
Confidence 322211 01234578999987445666677789999998742 22222211 12 678999999987666
Q ss_pred EeC----------CCeEEEEEcCCCeeEEeccccC----CCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 459 VGE----------DRNLYCFSHQSGKLEHLMKVHE----KDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 459 g~~----------dg~i~iwd~~~~~~~~~~~~h~----~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
... .+.|..+|. .++.+..+.... ..++++++ .++.++++...++.|.++++
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 246 SSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred ecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 544 467888986 477776665432 34667776 46666666667888888764
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.05 E-value=6.2e-08 Score=98.65 Aligned_cols=268 Identities=12% Similarity=0.101 Sum_probs=163.1
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccc-eeeccCcceeEEEEcCCCCeEEEEeC------CCeEEEEEccCCe
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADE-TFMMHDETVLCIEFSRDSEMLASGSQ------DGKIKVWRIRSGQ 296 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~s~~~~~l~s~~~------dg~i~vwd~~~~~ 296 (512)
.+..+++++.||.|..+|..+|+........... .......++ . .++ .+++++. +|.|..+|..+|+
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~----v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~ 189 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR----V-VKG-KVIIGNGGAEYGVRGFVSAYDADTGK 189 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE----E-ETT-EEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE----E-ECC-EEEEeCCCCCcCCCCEEEEEECCCCc
Confidence 3567888889999999999999987655431100 000011111 1 133 4555433 5899999999999
Q ss_pred eeEEecccc--c----------------------------cCeEEEEEecCCCEEEEEeCCC------------------
Q 010362 297 CLRRLERAH--S----------------------------EGVTSLVFSRDGSQILSTSFDS------------------ 328 (512)
Q Consensus 297 ~~~~~~~~~--~----------------------------~~i~~~~~~~~~~~l~~~~~dg------------------ 328 (512)
.+.++.... . .....+++.|+...++.++.++
T Consensus 190 ~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~ 269 (668)
T 1kv9_A 190 LAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYL 269 (668)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred EEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceee
Confidence 988775211 0 0112468888888898888776
Q ss_pred -cEEEEeCCCCceeEEeeC--Cc-------cceeEEEEcCCCC---EEEEEeCCCcEEEEeCCCCceeeecCCCCCC---
Q 010362 329 -TARIHGLKSGKLLKEFRG--HS-------SYVNDAIFTNDGS---RVVTASSDCTVKVWDLKSTDCLQTFKPPPPL--- 392 (512)
Q Consensus 329 -~v~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--- 392 (512)
.|..+|.++|+.+..++. |. .++....+..+|+ .++.++.+|.++++|..+++.+.........
T Consensus 270 ~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~ 349 (668)
T 1kv9_A 270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAE 349 (668)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEE
T ss_pred eeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccc
Confidence 399999999999988864 22 2222223334564 6888999999999999999877433221100
Q ss_pred -----------------CCC----------CceeEEEEEcCCCCCeEEE-------------------------------
Q 010362 393 -----------------RGG----------DASVNSVHLFPKNPDHIVV------------------------------- 414 (512)
Q Consensus 393 -----------------~~~----------~~~i~~~~~~~~~~~~l~~------------------------------- 414 (512)
.+. ...-..++++|.. .++++
T Consensus 350 ~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~-g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (668)
T 1kv9_A 350 KVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT-GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADA 428 (668)
T ss_dssp EECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT-TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGC
T ss_pred ccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC-CEEEEeccccceEeeeeccccccccccccCcccccc
Confidence 000 0000124555554 22222
Q ss_pred -----EcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCe-E
Q 010362 415 -----CNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDV-I 487 (512)
Q Consensus 415 -----~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v-~ 487 (512)
...++.+..||.. ++..-...... ......+...+.++++|+.||.++.||..+|+.+..+....... .
T Consensus 429 ~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~----~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~ 504 (668)
T 1kv9_A 429 TDVPAAVVSGALLAWDPVKQKAAWKVPYPT----HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAA 504 (668)
T ss_dssp CCCCGGGCEEEEEEEETTTTEEEEEEEESS----SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CCCCCCCccceEEEEeCCCCcEEEEccCCC----CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccC
Confidence 1123779999987 55444443322 12223344568889999999999999999999998876543211 2
Q ss_pred EEEEcCCCC-eEEEEE
Q 010362 488 GVTHHPHRN-LLATYG 502 (512)
Q Consensus 488 ~v~~~p~~~-~l~s~~ 502 (512)
-+.+..+++ +++.++
T Consensus 505 p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 505 PMTFELAGRQYVAIMA 520 (668)
T ss_dssp CEEEEETTEEEEEEEE
T ss_pred ceEEEECCEEEEEEEe
Confidence 233444665 444444
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.05 E-value=1.3e-07 Score=82.57 Aligned_cols=211 Identities=15% Similarity=0.208 Sum_probs=143.7
Q ss_pred eeccCcceeEEEEcCCCCeEE-EEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC
Q 010362 259 FMMHDETVLCIEFSRDSEMLA-SGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 259 ~~~h~~~v~~l~~s~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 337 (512)
+.+-...+..++|+|+++.|+ +...++.|...|.. ++.++++..........+++.+++.++++.-.++.+.++++..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 334556799999999766554 56778899999987 8888877544446788999998887666655677899988765
Q ss_pred Cce---eEEee------CCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCC---CceeeecCCCC-CCCCCCceeEEEEE
Q 010362 338 GKL---LKEFR------GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS---TDCLQTFKPPP-PLRGGDASVNSVHL 404 (512)
Q Consensus 338 ~~~---~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~-~~~~~~~~i~~~~~ 404 (512)
... +.... ..+.....++|+|.++.|+++.......+|.+.. ......+..+. ..........++++
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 442 22221 1234568999999998888877766666665541 11111110000 00011235689999
Q ss_pred cCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCccc------CCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Q 010362 405 FPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKRE------GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 405 ~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~ 471 (512)
+|....+++....+..+..+|..++.+..+.-.... -...-.+++.++|+ ++..++.+.++.|...
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC-
T ss_pred cCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEec
Confidence 999988999999999999999998876665544321 13567999999998 5555777788877643
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=7.2e-08 Score=83.60 Aligned_cols=185 Identities=13% Similarity=0.158 Sum_probs=123.7
Q ss_pred eeEEEEcCCCCeEEEEeCCC--eEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeE
Q 010362 266 VLCIEFSRDSEMLASGSQDG--KIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLK 342 (512)
Q Consensus 266 v~~l~~s~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~ 342 (512)
...+.|+ ++.+..+++.+| .|+++|+.+++.+.++.. ..........++++.|+... .++.+.+||..+.+.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 4889998 677777777766 899999999999888863 23333333333455666655 47899999999999999
Q ss_pred EeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 343 EFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 343 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
++..... -..+ ++++..|+.+..++.|.++|..+.+....+.... .+
T Consensus 122 ti~~~~e-G~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~----------------~g-------------- 168 (262)
T 3nol_A 122 SFNYDGE-GWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA----------------HG-------------- 168 (262)
T ss_dssp EEECSSC-CCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEE----------------TT--------------
T ss_pred EEECCCC-ceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc----------------CC--------------
Confidence 9875332 2233 3567777776667889999999877665543210 00
Q ss_pred EEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecccc------------CCCeEEEE
Q 010362 423 IMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH------------EKDVIGVT 490 (512)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h------------~~~v~~v~ 490 (512)
..-..++.+.+. +|+..+..-.++.|.+.|..+|+.+..+... ....+.|+
T Consensus 169 ----------------~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA 231 (262)
T 3nol_A 169 ----------------EELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIA 231 (262)
T ss_dssp ----------------EECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEE
T ss_pred ----------------ccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEE
Confidence 000123334444 5654433336788999999999988776532 23568999
Q ss_pred EcCCCCeEEEEEC
Q 010362 491 HHPHRNLLATYGE 503 (512)
Q Consensus 491 ~~p~~~~l~s~~~ 503 (512)
|+|+++.|...|.
T Consensus 232 ~dp~~~~lfVTGK 244 (262)
T 3nol_A 232 WDKEHHRLFVTGK 244 (262)
T ss_dssp EETTTTEEEEEET
T ss_pred EcCCCCEEEEECC
Confidence 9998776666654
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.04 E-value=6.2e-08 Score=96.57 Aligned_cols=282 Identities=13% Similarity=0.100 Sum_probs=170.0
Q ss_pred CCEEEEEeC-CCeEEEEEc-CCCeeeccccccccceeec--c-CcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeE
Q 010362 225 GQFLVSCSF-DGFIEVWDY-LSGKLKKDLQYQADETFMM--H-DETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLR 299 (512)
Q Consensus 225 ~~~l~sg~~-dg~i~iwd~-~~~~~~~~~~~~~~~~~~~--h-~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~ 299 (512)
+..+++++. ++.|.-+|. .+|+.+............. . ...-..++. .+..++.++.|+.+..+|..+|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 556667777 899999999 8998876554321100000 0 000011222 35578888889999999999999887
Q ss_pred Eeccccc---cCeE-EEEEecCCCEEEEEeC------CCcEEEEeCCCCceeEEeeCCccc-------------------
Q 010362 300 RLERAHS---EGVT-SLVFSRDGSQILSTSF------DSTARIHGLKSGKLLKEFRGHSSY------------------- 350 (512)
Q Consensus 300 ~~~~~~~---~~i~-~~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~------------------- 350 (512)
+...... ..+. +.... + ..+++++. ++.|+.+|.++++.+.++......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 7652210 0111 11111 3 45666655 789999999999998877642211
Q ss_pred -------------------eeEEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCceeeecCCCCC----
Q 010362 351 -------------------VNDAIFTNDGSRVVTASSD----------------CTVKVWDLKSTDCLQTFKPPPP---- 391 (512)
Q Consensus 351 -------------------v~~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~---- 391 (512)
...+++.++...++.++.+ +.|..+|.++++....++....
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 0235677766677666532 3599999999998877654321
Q ss_pred CCCCCceeEEEEEcCCCC--CeEEEEcCCCcEEEEecC-CeEEEEeeCCcc----------cCCcE--------------
Q 010362 392 LRGGDASVNSVHLFPKNP--DHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKR----------EGGDF-------------- 444 (512)
Q Consensus 392 ~~~~~~~i~~~~~~~~~~--~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~----------~~~~~-------------- 444 (512)
......++. +...+++. ..++.++.+|.++++|.. ++.+........ .+.++
T Consensus 298 ~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 298 FAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred cccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 001112222 11112332 356778889999999986 555544432210 00111
Q ss_pred ------------EEEEECCCCCEEEEEe-------------------------------------CCCeEEEEEcCCCee
Q 010362 445 ------------VAACVSPKGEWIYCVG-------------------------------------EDRNLYCFSHQSGKL 475 (512)
Q Consensus 445 ------------~~~~~s~~g~~l~~g~-------------------------------------~dg~i~iwd~~~~~~ 475 (512)
..++++|+...+++.+ .+|.|+.||..+++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 2356788877777654 357899999999998
Q ss_pred EEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 476 EHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 476 ~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+-.+... ..+.+......+..++.++.||.|+.||+
T Consensus 457 ~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~ 492 (571)
T 2ad6_A 457 KWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDN 492 (571)
T ss_dssp EEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred EEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEEC
Confidence 8776532 22222222334567777899999999985
No 253
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=99.03 E-value=7e-10 Score=76.56 Aligned_cols=38 Identities=18% Similarity=0.318 Sum_probs=34.7
Q ss_pred cccchhhHHHHHHHHHHhcChHHHHHHHHhhcCccccc
Q 010362 3 LEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNT 40 (512)
Q Consensus 3 ~~~~~~e~~~li~q~L~e~G~~~t~~~l~~Es~~~~~~ 40 (512)
|.++++||++||++||+|+||.+||.+|++||++.-.+
T Consensus 1 msitsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~ 38 (90)
T 2xtc_A 1 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSN 38 (90)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSC
T ss_pred CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCccc
Confidence 57899999999999999999999999999999997654
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.02 E-value=5.3e-07 Score=80.75 Aligned_cols=225 Identities=12% Similarity=0.054 Sum_probs=139.8
Q ss_pred CeEEEEeCCCeEEEEEccCCeee-----EEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeEEeeCCcc
Q 010362 276 EMLASGSQDGKIKVWRIRSGQCL-----RRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLKEFRGHSS 349 (512)
Q Consensus 276 ~~l~s~~~dg~i~vwd~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~ 349 (512)
.+|+.+.. +.|+.+++...... ..+. .....+..++|++++..|+.+. .++.|..++.........+.....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 34555553 47888888754321 1111 1234578999999776666555 467899999876554333333334
Q ss_pred ceeEEEEcCCCCEEEEE-eCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC--CCcEEEEec
Q 010362 350 YVNDAIFTNDGSRVVTA-SSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK--TSSIYIMTL 426 (512)
Q Consensus 350 ~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--~~~i~~~~~ 426 (512)
....+++++++..++.+ ...+.|.++++..... ..+... .......+++.|.+..++++... .+.|..++.
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~-----~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDT-----GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS-----SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEEC-----CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 67899999976555544 4567899999875332 222111 12356889999976455555544 478888888
Q ss_pred CCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCC
Q 010362 427 QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDC 505 (512)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg 505 (512)
++.....+... .......+++++++..|+.+. ..+.|.++|...+.....+.. ......++.. .+.++++...++
T Consensus 154 dg~~~~~~~~~--~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~ 229 (267)
T 1npe_A 154 DGTNRRILAQD--NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTN 229 (267)
T ss_dssp TSCCCEEEECT--TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTT
T ss_pred CCCCcEEEEEC--CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCC
Confidence 86554433321 123578899999887776665 568999999876554433332 2334567654 344444444567
Q ss_pred eEEEecC
Q 010362 506 TMKLWKP 512 (512)
Q Consensus 506 ~i~iW~~ 512 (512)
.|.++|+
T Consensus 230 ~v~~~d~ 236 (267)
T 1npe_A 230 SVIAMDL 236 (267)
T ss_dssp EEEEEET
T ss_pred eEEEEeC
Confidence 8887764
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=2.5e-07 Score=80.23 Aligned_cols=205 Identities=10% Similarity=0.071 Sum_probs=140.2
Q ss_pred ccceEEEecCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe
Q 010362 203 TLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS 282 (512)
Q Consensus 203 ~~~~~~~~~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~ 282 (512)
+...++....+.-...+.|+ ++.+..+.+.+|.|+++|+.+++....+ ... ..---.+++.. ++..+..-
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-------~~FgeGit~~g-~~Ly~ltw 113 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLG-------NIFAEGLASDG-ERLYQLTW 113 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-------TCCEEEEEECS-SCEEEEES
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-------CcceeEEEEeC-CEEEEEEc
Confidence 34455544444555788897 4667777788899999999999887765 321 11112244433 23334444
Q ss_pred CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCC--cc---ceeEEEEc
Q 010362 283 QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH--SS---YVNDAIFT 357 (512)
Q Consensus 283 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~--~~---~v~~~~~~ 357 (512)
.++.+.+||..+.+.+.++... ..-..++ +|++.|+.+..++.|.++|..+.+.+.++... .. .++.+.|.
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~--~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYS--GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECS--SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred cCCEEEEEECCcCcEEEEEeCC--CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe
Confidence 6889999999999999998743 2223444 56888888877899999999999988877642 22 34667776
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCC-------CCCCCceeEEEEEcCCCCCeEEEEcCCCcEE
Q 010362 358 NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP-------LRGGDASVNSVHLFPKNPDHIVVCNKTSSIY 422 (512)
Q Consensus 358 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~ 422 (512)
+|...+..-.++.|.+.|.++++....+....- ......-.+.+++.|.+..++++|-.=..++
T Consensus 190 -dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ 260 (268)
T 3nok_A 190 -NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLF 260 (268)
T ss_dssp -TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEE
T ss_pred -CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceE
Confidence 665555554678999999999998887764310 1123346789999999878888876555443
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.00 E-value=3e-07 Score=84.26 Aligned_cols=230 Identities=8% Similarity=-0.006 Sum_probs=141.4
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCC--cEEEEeCCCCcee
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS--TARIHGLKSGKLL 341 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~v~i~d~~~~~~~ 341 (512)
.....++|+++++++++...++.|..||.... ....+. ....+..+++.++|+.+++....+ .|..+|..+++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~--~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe--CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 45678999999987777667899999997653 333332 345688999999998665554332 4777787777654
Q ss_pred EEeeC-CccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce-eeecCC---CCCCCCCCceeEEEEEcCCCCCeEEEEc
Q 010362 342 KEFRG-HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDC-LQTFKP---PPPLRGGDASVNSVHLFPKNPDHIVVCN 416 (512)
Q Consensus 342 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 416 (512)
..... .......++..+++..+++-..++.|.++|..++.. +..... ...........+.+ +|++..++++-.
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 33221 122334555555554455444588999999875421 110000 00001111234445 677656677777
Q ss_pred CCCcEEEEecCC--eE--EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeE--EeccccCCCeEEEE
Q 010362 417 KTSSIYIMTLQG--QV--VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE--HLMKVHEKDVIGVT 490 (512)
Q Consensus 417 ~~~~i~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~v~ 490 (512)
..+.|..++..+ .. ...+... .....++++++|++.++....+.|.++|.. ++.. ..+.......++++
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 888999999873 11 1111111 124468999999877776678899999975 6553 23443345689999
Q ss_pred Ec---CCCCeEEEEEC
Q 010362 491 HH---PHRNLLATYGE 503 (512)
Q Consensus 491 ~~---p~~~~l~s~~~ 503 (512)
|. |++..|+.++.
T Consensus 262 ~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTN 277 (306)
T ss_dssp ECCSTTTTTEEEEEEC
T ss_pred EecccCCCCEEEEECC
Confidence 98 88776665554
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.00 E-value=1.5e-07 Score=93.77 Aligned_cols=284 Identities=10% Similarity=0.055 Sum_probs=169.5
Q ss_pred CCEEEEEeC-CCeEEEEEc-CCCeeeccccccccceee---ccCcceeEEEEcCCCCe----EEEEeCCCeEEEEEccCC
Q 010362 225 GQFLVSCSF-DGFIEVWDY-LSGKLKKDLQYQADETFM---MHDETVLCIEFSRDSEM----LASGSQDGKIKVWRIRSG 295 (512)
Q Consensus 225 ~~~l~sg~~-dg~i~iwd~-~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~s~~~~~----l~s~~~dg~i~vwd~~~~ 295 (512)
+..+++++. ++.|.-+|. .+|+.+............ ........++++|.+.. ++.++.|+.+..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 556777777 899999999 899887655432111000 00001123455444444 888888999999999999
Q ss_pred eeeEEeccccc---cCeEE-EEEecCCCEEEEEe------CCCcEEEEeCCCCceeEEeeCCccce--------------
Q 010362 296 QCLRRLERAHS---EGVTS-LVFSRDGSQILSTS------FDSTARIHGLKSGKLLKEFRGHSSYV-------------- 351 (512)
Q Consensus 296 ~~~~~~~~~~~---~~i~~-~~~~~~~~~l~~~~------~dg~v~i~d~~~~~~~~~~~~~~~~v-------------- 351 (512)
+.+.+...... ..+.+ .... ++ .+++++ .+|.|+.+|.++|+.+..+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 98877652211 01111 1111 34 555555 37999999999999988776432110
Q ss_pred ------------------------eEEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCceeeecCCCCC
Q 010362 352 ------------------------NDAIFTNDGSRVVTASSD----------------CTVKVWDLKSTDCLQTFKPPPP 391 (512)
Q Consensus 352 ------------------------~~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~ 391 (512)
..+++.++...++.++.+ +.|..+|.++++....++....
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 135666777778777665 3799999999998877664321
Q ss_pred C----CCCCceeEEEEEc-CCCC--CeEEEEcCCCcEEEEecC-CeEEEEeeCCc----------ccCC-----------
Q 010362 392 L----RGGDASVNSVHLF-PKNP--DHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK----------REGG----------- 442 (512)
Q Consensus 392 ~----~~~~~~i~~~~~~-~~~~--~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~----------~~~~----------- 442 (512)
- .....++. +... .++. ..++.++.+|.++++|.. ++.+....... ..+.
T Consensus 300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 0 01111221 1111 2332 457778899999999987 55554433221 0000
Q ss_pred ---------------cEEEEEECCCCCEEEEEe---------------------------------------CCCeEEEE
Q 010362 443 ---------------DFVAACVSPKGEWIYCVG---------------------------------------EDRNLYCF 468 (512)
Q Consensus 443 ---------------~~~~~~~s~~g~~l~~g~---------------------------------------~dg~i~iw 468 (512)
....++++|+..++++.. ..|.|..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 112356666666655431 34789999
Q ss_pred EcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 469 SHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 469 d~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
|+.+|+.+-..... .++.+-.....+.+++.++.||.++.||+
T Consensus 459 D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~ 501 (599)
T 1w6s_A 459 NAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDS 501 (599)
T ss_dssp CTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred ECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEEC
Confidence 99999887665421 12211111224667777899999999885
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.97 E-value=2.1e-07 Score=86.03 Aligned_cols=246 Identities=9% Similarity=0.001 Sum_probs=149.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeecccccccc------------ceeeccCcceeEEEEcC-CCCeEEE
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQAD------------ETFMMHDETVLCIEFSR-DSEMLAS 280 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~------------~~~~~h~~~v~~l~~s~-~~~~l~s 280 (512)
....+++|+++|+++.++..++.|..|+..++.... +..... .........+.++++.+ +++ |+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 345678899999978888889999999987654321 110000 00001123578999998 554 555
Q ss_pred EeCCCeEEEEEccCCeeeEEecc----ccccCeEEEEEec-CCCEEEEEeC-----------------CCcEEEEeCCCC
Q 010362 281 GSQDGKIKVWRIRSGQCLRRLER----AHSEGVTSLVFSR-DGSQILSTSF-----------------DSTARIHGLKSG 338 (512)
Q Consensus 281 ~~~dg~i~vwd~~~~~~~~~~~~----~~~~~i~~~~~~~-~~~~l~~~~~-----------------dg~v~i~d~~~~ 338 (512)
+...+.|..+|..++.. ..+.. ........+++.+ +|+..++... ++.|..+|..++
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 55556688888765542 22211 1123578899999 8876665432 367889998766
Q ss_pred ceeEEeeCCccceeEEEEcCCCCEEEEE-eCCCcEEEEeCCCCc--eeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEE
Q 010362 339 KLLKEFRGHSSYVNDAIFTNDGSRVVTA-SSDCTVKVWDLKSTD--CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVC 415 (512)
Q Consensus 339 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 415 (512)
+...... .....+.++++|+++.|+.+ +.++.|.+|++.... ....+.. ... ...+++.+++ .++++.
T Consensus 176 ~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~------~~g-P~gi~~d~~G-~l~va~ 246 (322)
T 2fp8_A 176 ETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK------IPN-PGNIKRNADG-HFWVSS 246 (322)
T ss_dssp EEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE------CSS-EEEEEECTTS-CEEEEE
T ss_pred EEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe------CCC-CCCeEECCCC-CEEEEe
Confidence 5433222 22346679999999866655 556889999987532 1111110 112 6778888887 555555
Q ss_pred cC----------CCcEEEEecCCeEEEEeeCCccc-CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q 010362 416 NK----------TSSIYIMTLQGQVVKSFSSGKRE-GGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 416 ~~----------~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~ 472 (512)
.. .+.|..++..+.....+...... -..+..+++ .++++.++...++.|..+++..
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 44 46788888888777666543211 123444555 3555555555778888888753
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.94 E-value=3e-07 Score=91.63 Aligned_cols=266 Identities=12% Similarity=0.085 Sum_probs=158.5
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeE-EEEcCCCCeEEEEeC------CCeEEEEEccCCe
Q 010362 224 DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLC-IEFSRDSEMLASGSQ------DGKIKVWRIRSGQ 296 (512)
Q Consensus 224 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~s~~~~~l~s~~~------dg~i~vwd~~~~~ 296 (512)
.+..+++++.|+.+..+|..+|+........... ....+.+ .... ++ .+++++. +|.|..+|..+|+
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~----~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPK----VGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGG----GTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCC----ccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCc
Confidence 3567888888999999999999887654321100 0001111 0111 34 4555554 7999999999999
Q ss_pred eeEEecccccc-------------------------------------CeEEEEEecCCCEEEEEeCC------------
Q 010362 297 CLRRLERAHSE-------------------------------------GVTSLVFSRDGSQILSTSFD------------ 327 (512)
Q Consensus 297 ~~~~~~~~~~~-------------------------------------~i~~~~~~~~~~~l~~~~~d------------ 327 (512)
.+.++...... ....+++.++...++.++.+
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 88876522110 00235667766777776642
Q ss_pred ----CcEEEEeCCCCceeEEeeCC--cc----ceeE---EEEcCCCC---EEEEEeCCCcEEEEeCCCCceeeecCCCCC
Q 010362 328 ----STARIHGLKSGKLLKEFRGH--SS----YVND---AIFTNDGS---RVVTASSDCTVKVWDLKSTDCLQTFKPPPP 391 (512)
Q Consensus 328 ----g~v~i~d~~~~~~~~~~~~~--~~----~v~~---~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 391 (512)
+.|..+|.++++.+..++.. .. .+.. +....+|+ .++.++.+|.+.++|..+++.+........
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 35999999999998887642 11 1111 22224674 577888999999999999988776543220
Q ss_pred CC-------CCCcee--------------------------EEEEEcCCCCCeEEEEc----------------------
Q 010362 392 LR-------GGDASV--------------------------NSVHLFPKNPDHIVVCN---------------------- 416 (512)
Q Consensus 392 ~~-------~~~~~i--------------------------~~~~~~~~~~~~l~~~~---------------------- 416 (512)
.. ....++ ..++++|+. .++++..
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~-g~~yv~~~~~~~~~~~~~~~~~~g~~~~g 426 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES-RTLYAGLNHICMDWEPFMLPYRAGQFFVG 426 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT-TEEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC-CEEEEEchhccccccccccccccCCcccc
Confidence 00 000011 234566655 3333322
Q ss_pred ---------------CCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecc
Q 010362 417 ---------------KTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480 (512)
Q Consensus 417 ---------------~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~ 480 (512)
.++.+..+|.. ++.......... +....+...+..+++++.||.|+.+|..+|+.+..+.
T Consensus 427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~----~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA----AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp EEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC----CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC----ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 34788889887 555444433221 1111222346778889999999999999999998776
Q ss_pred ccCCC-eEEEEEcCCCCeEEE
Q 010362 481 VHEKD-VIGVTHHPHRNLLAT 500 (512)
Q Consensus 481 ~h~~~-v~~v~~~p~~~~l~s 500 (512)
..... -..+.+..+++.++.
T Consensus 503 ~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 503 MPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp CSSCCCSCCEEEEETTEEEEE
T ss_pred CCCCcEeeeEEEEECCEEEEE
Confidence 43221 122345567764443
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.94 E-value=4.4e-06 Score=76.70 Aligned_cols=235 Identities=12% Similarity=0.032 Sum_probs=144.7
Q ss_pred EEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEE-eCCCeEEEEEccC---CeeeEEecc
Q 010362 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG-SQDGKIKVWRIRS---GQCLRRLER 303 (512)
Q Consensus 228 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~vwd~~~---~~~~~~~~~ 303 (512)
|+.+. ...|+..|+.+.+....+. ....+..++|++++..|..+ ..++.|..+++.. +.....+..
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~---------~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIP---------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEEC---------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred EEEEC-CCeEEEEECCCcceEehhc---------CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe
Confidence 34343 3568888887765433221 33567899999876555555 4568999999875 122222221
Q ss_pred ccccCeEEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCC--CcEEEEeCCCC
Q 010362 304 AHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD--CTVKVWDLKST 380 (512)
Q Consensus 304 ~~~~~i~~~~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~ 380 (512)
..-.....+++.+.+..|+ +-...+.|.++++........+.........++++|.+..|+.+... +.|..+++...
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 2224567899987555555 44567889999986544333333334567899999966666555543 67888887643
Q ss_pred ceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe
Q 010362 381 DCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG 460 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 460 (512)
. ...+.. ..-.....+++.|.+..++++-...+.|..+++++.....+............+++. .+...++-.
T Consensus 154 ~-~~~~~~-----~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~ 226 (316)
T 1ijq_A 154 D-IYSLVT-----ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDI 226 (316)
T ss_dssp C-EEEEEC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEET
T ss_pred C-eEEEEE-----CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEEC
Confidence 2 222211 112457899999988677777778889999999875544443322122345677774 355555555
Q ss_pred CCCeEEEEEcCCCeeEEec
Q 010362 461 EDRNLYCFSHQSGKLEHLM 479 (512)
Q Consensus 461 ~dg~i~iwd~~~~~~~~~~ 479 (512)
..+.|..++..+|+.+..+
T Consensus 227 ~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 227 INEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp TTTEEEEEETTTCCCCEEE
T ss_pred CCCeEEEEeCCCCcceEEE
Confidence 7789999998777654443
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.93 E-value=1.4e-06 Score=79.84 Aligned_cols=229 Identities=10% Similarity=0.039 Sum_probs=140.5
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC--eEEEEE
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG--KIKVWR 291 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg--~i~vwd 291 (512)
.....++|+++|+++++-..++.|..||.... ....+. ....+..+++.++|+++++..... .|..+|
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~---------~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT---------VEGKVSGLAFTSNGDLVATGWNADSIPVVSLV 101 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE---------CSSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe---------CCCCceeEEEcCCCcEEEEeccCCcceEEEEc
Confidence 56788999999997777778899999997653 222111 234688999999998666554322 466777
Q ss_pred ccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCce-eEEee---------CCccceeEEEEcCCCC
Q 010362 292 IRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL-LKEFR---------GHSSYVNDAIFTNDGS 361 (512)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~-~~~~~---------~~~~~v~~~~~~~~~~ 361 (512)
..+++...............++..+++..+++...++.|+.+|..+++. +.... ..-...+.+ +|+++
T Consensus 102 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~ 179 (306)
T 2p4o_A 102 KSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGN 179 (306)
T ss_dssp CTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETT
T ss_pred CCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCC
Confidence 7777754333212223345555555554444444588999999865431 11110 111234455 78887
Q ss_pred EEEEE-eCCCcEEEEeCCC-Cce--eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCC
Q 010362 362 RVVTA-SSDCTVKVWDLKS-TDC--LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSG 437 (512)
Q Consensus 362 ~l~~~-~~dg~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 437 (512)
.|+.+ ...+.|..||+.. +.. ...+. .......+++.+++ .++++....+.|..++..+........
T Consensus 180 ~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-------~~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~G~~~~~~~~- 250 (306)
T 2p4o_A 180 FLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-------EQTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDRSTTIIAQA- 250 (306)
T ss_dssp EEEEEETTTTEEEEEEBCTTSCBCCCEEEE-------ESCCCSSEEEBTTC-CEEEECBTTCCEEEECTTCCEEEEECG-
T ss_pred EEEEEeCCCCEEEEEEeCCCCCCCccEEEe-------ccCCCCCeEECCCC-CEEEEeCCCCeEEEECCCCCEEEEeec-
Confidence 66555 4567899999875 321 01110 01234567888877 677777778899999988665332111
Q ss_pred cccCCcEEEEEEC---CCCCEEEEEeCCC
Q 010362 438 KREGGDFVAACVS---PKGEWIYCVGEDR 463 (512)
Q Consensus 438 ~~~~~~~~~~~~s---~~g~~l~~g~~dg 463 (512)
........+++|. |+++.|++.+..+
T Consensus 251 ~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 251 EQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp GGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ccccCCceEEEEecccCCCCEEEEECCCC
Confidence 1122457899998 8988887776543
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.91 E-value=3.3e-06 Score=78.65 Aligned_cols=246 Identities=11% Similarity=0.030 Sum_probs=153.4
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe-CCCeEEEEEc
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-QDGKIKVWRI 292 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~vwd~ 292 (512)
+..+|.+..+++ +|+.+. ...|+..++........+ .....+..++|++.+..|..+. ..+.|..+++
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~---------~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~ 102 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLL---------NNLENAIALDFHHRRELVFWSDVTLDRILRANL 102 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEE---------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEee---------cCCCceEEEEEeccccEEEEEeccCCceEEEec
Confidence 345666666644 444433 345877777654432211 1334578999998666665554 5688999998
Q ss_pred cCCeeeEEeccccccCeEEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEe-CC-
Q 010362 293 RSGQCLRRLERAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS-SD- 369 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d- 369 (512)
..+.....+. ........+++.+.+..|+ +-...+.|.+.++........+...-.....++++|.+..|+.+. ..
T Consensus 103 ~g~~~~~~~~-~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~ 181 (349)
T 3v64_C 103 NGSNVEEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT 181 (349)
T ss_dssp TSCSCEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSS
T ss_pred CCCCceEEEe-CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCC
Confidence 7665333332 2334567899988655554 445567899999865443333333445678999999666555444 44
Q ss_pred CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEE
Q 010362 370 CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACV 449 (512)
Q Consensus 370 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (512)
+.|..+++..... ..+.. ......+.++++|.+..++++-...+.|..+++++.....+.... ......+++
T Consensus 182 ~~I~r~~~dG~~~-~~~~~-----~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~--~~~P~giav 253 (349)
T 3v64_C 182 PRIEASSMDGSGR-RIIAD-----THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITV 253 (349)
T ss_dssp CEEEEEETTSCSC-EESCC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS--CSSEEEEEE
T ss_pred CEEEEEeCCCCCc-EEEEE-----CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC--CCCceEEEE
Confidence 7788888764332 22211 123457899999988677777778889999999875544443322 234567777
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCCCeeEEecc
Q 010362 450 SPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK 480 (512)
Q Consensus 450 s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~ 480 (512)
..+...++-...+.|..++..+|+....+.
T Consensus 254 -~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 254 -FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp -ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred -ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 345555555578889999876776554443
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=1.7e-05 Score=82.70 Aligned_cols=285 Identities=9% Similarity=0.033 Sum_probs=175.2
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR 293 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~ 293 (512)
..|.++...++|.+.+ |+.+ -+.+||..+++...... ............|.++...++|. |..|+..+-|.++|..
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHN-NPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC------------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEc-CCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 5689999998887665 4444 58899987765443211 00000011346799999988876 5556664568889987
Q ss_pred CCeeeEEec-------------cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee---------CCccce
Q 010362 294 SGQCLRRLE-------------RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR---------GHSSYV 351 (512)
Q Consensus 294 ~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~---------~~~~~v 351 (512)
++....... ......|.++...++|. |..|+.++-|..++..++....... .....|
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 765322110 01245689998888775 6677778889999986554322110 023468
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEE
Q 010362 352 NDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 431 (512)
Q Consensus 352 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 431 (512)
.++...++|. |..|+.++-|..||..++.... +..+. ......|.++...+++ .+.+++.++.+..++......
T Consensus 366 ~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~-~~~~~--~~~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 366 SSVCDDGQGK-LWIGTDGGGINVFENGKRVAIY-NKENR--ELLSNSVLCSLKDSEG--NLWFGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp EEEEECTTSC-EEEEEBSSCEEEEETTEEEEEC-C-------CCCSBEEEEEECTTS--CEEEEETTEEEEEECSSSCEE
T ss_pred EEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEE-ccCCC--CCCCcceEEEEECCCC--CEEEEeccCCEEEEcCCCCcE
Confidence 8998888876 5566656669999987543322 21111 1234578888876654 566677777788898876655
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecccc-----CCCeEEEEEcCCCCeEEEEECCCe
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH-----EKDVIGVTHHPHRNLLATYGEDCT 506 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~l~s~~~dg~ 506 (512)
..+.........+.++...++|.+ ..|+. +-+..||..+++........ ...|.++...+++.+.+....+|
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G- 516 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG- 516 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-
T ss_pred EEeccCCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-
Confidence 555432223456888888888874 44555 56889998877654332211 46789999998888766443355
Q ss_pred EEEecC
Q 010362 507 MKLWKP 512 (512)
Q Consensus 507 i~iW~~ 512 (512)
|..|++
T Consensus 517 l~~~~~ 522 (781)
T 3v9f_A 517 VGIYTP 522 (781)
T ss_dssp EEEECT
T ss_pred EEEEeC
Confidence 555653
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.87 E-value=1e-05 Score=76.81 Aligned_cols=237 Identities=12% Similarity=0.037 Sum_probs=148.9
Q ss_pred EEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe-CCCeEEEEEccCCe---eeEEec
Q 010362 227 FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-QDGKIKVWRIRSGQ---CLRRLE 302 (512)
Q Consensus 227 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~vwd~~~~~---~~~~~~ 302 (512)
+|+.+. ...|+..++........ ......+..++|++.+..|..+. ..+.|+.+++.... ....+.
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~---------~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~ 154 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSL---------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI 154 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEE---------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE
T ss_pred eeEEec-cceeEEEccCCcceeEe---------ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE
Confidence 444444 46788888876543221 11446788999998666665554 46789989886521 122222
Q ss_pred cccccCeEEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC--CCcEEEEeCCC
Q 010362 303 RAHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS--DCTVKVWDLKS 379 (512)
Q Consensus 303 ~~~~~~i~~~~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~ 379 (512)
.........+++.+.+..|+ +-...+.|.+.++........+.........++++|.+..|+.+.. .+.|...++..
T Consensus 155 ~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 155 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 23345678899998544454 4455788999998755544444444455889999997666665542 36788888865
Q ss_pred CceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEE
Q 010362 380 TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459 (512)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g 459 (512)
........ ..-.....+++.+.+..++++-.....|..+++++.....+......-.....+++. .+..+++-
T Consensus 235 ~~~~~~~~------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd 307 (400)
T 3p5b_L 235 VDIYSLVT------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTD 307 (400)
T ss_dssp CSCEEEEC------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEE
T ss_pred CccEEEEE------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEec
Confidence 43222211 112467889999988677777777889999999976555554332222345566662 33444555
Q ss_pred eCCCeEEEEEcCCCeeEEecc
Q 010362 460 GEDRNLYCFSHQSGKLEHLMK 480 (512)
Q Consensus 460 ~~dg~i~iwd~~~~~~~~~~~ 480 (512)
...+.|..+|..+|+.+..+.
T Consensus 308 ~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 308 IINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp SSSCSEEEEESSSCCCCEEEE
T ss_pred CCCCeEEEEEcCCCCceEEEe
Confidence 577889999987776655554
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.87 E-value=3.9e-06 Score=83.65 Aligned_cols=271 Identities=17% Similarity=0.164 Sum_probs=159.2
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeeccccccccce-eeccCcceeEEEEc-CCCC-eEEEEe------CCCeEEEEEccCC
Q 010362 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADET-FMMHDETVLCIEFS-RDSE-MLASGS------QDGKIKVWRIRSG 295 (512)
Q Consensus 225 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~s-~~~~-~l~s~~------~dg~i~vwd~~~~ 295 (512)
+..+++++.|+.|.-+|..+|+............ +.....++ +.=. .+++ .+++++ .+|.|..+|..+|
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 5678888899999999999999876544321100 00011111 1100 1233 555554 3789999999999
Q ss_pred eeeEEeccccc----------------------------------------cCeEEEEEecCCCEEEEEeC---------
Q 010362 296 QCLRRLERAHS----------------------------------------EGVTSLVFSRDGSQILSTSF--------- 326 (512)
Q Consensus 296 ~~~~~~~~~~~----------------------------------------~~i~~~~~~~~~~~l~~~~~--------- 326 (512)
+.+........ ..-..+++.|+...++.++.
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 98776542100 00023566677778877763
Q ss_pred -----------C----CcEEEEeCCCCceeEEeeC--Ccc----ceeE-EEEc---CCCC---EEEEEeCCCcEEEEeCC
Q 010362 327 -----------D----STARIHGLKSGKLLKEFRG--HSS----YVND-AIFT---NDGS---RVVTASSDCTVKVWDLK 378 (512)
Q Consensus 327 -----------d----g~v~i~d~~~~~~~~~~~~--~~~----~v~~-~~~~---~~~~---~l~~~~~dg~i~iwd~~ 378 (512)
| +.|..+|.++|+.+..++. |.. .+.. +... .+|+ .++.++.+|.++++|.+
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 354 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRS 354 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETT
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECC
Confidence 2 5799999999999988754 321 1111 2222 4664 67889999999999999
Q ss_pred CCceeeecCCCCCCC----------------------------CCCc-----------eeEEEEEcCCCCCeEEEE----
Q 010362 379 STDCLQTFKPPPPLR----------------------------GGDA-----------SVNSVHLFPKNPDHIVVC---- 415 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~----------------------------~~~~-----------~i~~~~~~~~~~~~l~~~---- 415 (512)
+++.+..+....... .... .-..++++|....+++..
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 998876554322000 0000 001334555543332221
Q ss_pred ----------------------------cCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEE
Q 010362 416 ----------------------------NKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLY 466 (512)
Q Consensus 416 ----------------------------~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~ 466 (512)
...+.+..||.. ++..-....... .........+..++.|+.||.++
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~----~~~g~~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP----LWAGVLATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC----CCSCCEEETTTEEEEECTTSEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC----CcccceEeCCCEEEEECCCCcEE
Confidence 125778889987 554444433211 11111122467888899999999
Q ss_pred EEEcCCCeeEEeccccCCCe-EEEEEcCCCC-eEEEE
Q 010362 467 CFSHQSGKLEHLMKVHEKDV-IGVTHHPHRN-LLATY 501 (512)
Q Consensus 467 iwd~~~~~~~~~~~~h~~~v-~~v~~~p~~~-~l~s~ 501 (512)
.||.++|+.+..++...+.. .-+.+..+|+ ++++.
T Consensus 511 A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 511 AFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 99999999998877543321 1256666776 44433
No 266
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.87 E-value=1.1e-05 Score=84.33 Aligned_cols=287 Identities=7% Similarity=0.004 Sum_probs=175.5
Q ss_pred cCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeecccc--c----cccceeeccCcceeEEEEcCCCCeEEEEeCCCe
Q 010362 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ--Y----QADETFMMHDETVLCIEFSRDSEMLASGSQDGK 286 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~--~----~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~ 286 (512)
...|.++...++|.+ ..|+..+-|.++|..++....... + ............|.++...++|. |..|+.++-
T Consensus 257 ~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKL-WIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG 334 (781)
T ss_dssp CCCEEEEEECTTSEE-EEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC
T ss_pred CceEEEEEECCCCCE-EEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe
Confidence 456899999888864 446654568889987665432111 0 00000111456799999998886 566776777
Q ss_pred EEEEEccCCeeeEEec--------cccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEe---eCCccceeEEE
Q 010362 287 IKVWRIRSGQCLRRLE--------RAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF---RGHSSYVNDAI 355 (512)
Q Consensus 287 i~vwd~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~---~~~~~~v~~~~ 355 (512)
|..++..++....... ......|.++...++|. |..|+.++-+..+|..++...... ......|.++.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 413 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL 413 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE
Confidence 8999877654322110 01235688998887775 566776777999997654332111 12345688898
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEee
Q 010362 356 FTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFS 435 (512)
Q Consensus 356 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 435 (512)
..+++. |..|+.++.+..+|..+++... +... ......|.++...+++ .+.+++. +.+..++........+.
T Consensus 414 ~d~~g~-lWigt~~~Gl~~~~~~~~~~~~-~~~~---~~~~~~v~~i~~d~~g--~lwigt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 414 KDSEGN-LWFGTYLGNISYYNTRLKKFQI-IELE---KNELLDVRVFYEDKNK--KIWIGTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp ECTTSC-EEEEETTEEEEEECSSSCEEEE-CCST---TTCCCCEEEEEECTTS--EEEEEET-TEEEEEESSSSSCCEEE
T ss_pred ECCCCC-EEEEeccCCEEEEcCCCCcEEE-eccC---CCCCCeEEEEEECCCC--CEEEEEC-CceEEEeCCCCeEEecc
Confidence 888876 4556766679999987765432 2211 1134568888776654 4555555 56888888754333332
Q ss_pred CCc---ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccc---cCCCeEEEEEcCCCCeEEEEECCCeEEE
Q 010362 436 SGK---REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKV---HEKDVIGVTHHPHRNLLATYGEDCTMKL 509 (512)
Q Consensus 436 ~~~---~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~~~dg~i~i 509 (512)
... .....+.+++..++|++.+ |+.++-+..||..+++....... ....|.++...+++.+.++. .+|.|..
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~ 563 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCF 563 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred cCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEE
Confidence 211 1135688899999888554 55544577899877665432211 24578999998888866654 4676577
Q ss_pred ecC
Q 010362 510 WKP 512 (512)
Q Consensus 510 W~~ 512 (512)
|||
T Consensus 564 ~d~ 566 (781)
T 3v9f_A 564 PSA 566 (781)
T ss_dssp SCT
T ss_pred ECC
Confidence 764
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.87 E-value=1.1e-06 Score=87.61 Aligned_cols=284 Identities=13% Similarity=0.099 Sum_probs=164.9
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeeccccccccceee-ccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEecc
Q 010362 225 GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM-MHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLER 303 (512)
Q Consensus 225 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 303 (512)
+..+++++.++.|.-+|..+|+.+............ .....-..++. .+..++.++.|+.|..+|..+|+.+.+...
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 445666665455999999999887655432110000 00000011222 255788888999999999999998877653
Q ss_pred cccc---CeE-EEEEec---CCC-EEEEEe------CCCcEEEEeCCCCceeEEeeCCccc-------------------
Q 010362 304 AHSE---GVT-SLVFSR---DGS-QILSTS------FDSTARIHGLKSGKLLKEFRGHSSY------------------- 350 (512)
Q Consensus 304 ~~~~---~i~-~~~~~~---~~~-~l~~~~------~dg~v~i~d~~~~~~~~~~~~~~~~------------------- 350 (512)
.... .+. ...... +++ .+++++ .++.|+.+|.++|+.+.........
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 2110 111 111111 233 566655 3789999999999988765431100
Q ss_pred ----------------------eeEEEEcCCCCEEEEEeC--------------------C----CcEEEEeCCCCceee
Q 010362 351 ----------------------VNDAIFTNDGSRVVTASS--------------------D----CTVKVWDLKSTDCLQ 384 (512)
Q Consensus 351 ----------------------v~~~~~~~~~~~l~~~~~--------------------d----g~i~iwd~~~~~~~~ 384 (512)
-..++++|+...++.+.. | +.|..+|.++++...
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 013566777777776653 2 589999999999888
Q ss_pred ecCCCCC-C---CCCCceeEEEEEc-CCCC--CeEEEEcCCCcEEEEecC-CeEEEEeeCCccc----------CC----
Q 010362 385 TFKPPPP-L---RGGDASVNSVHLF-PKNP--DHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKRE----------GG---- 442 (512)
Q Consensus 385 ~~~~~~~-~---~~~~~~i~~~~~~-~~~~--~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~----------~~---- 442 (512)
.++.... . .....++. +... .++. ..++.++.+|.++++|.. ++.+......... ..
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~ 384 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVER 384 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEEC
T ss_pred EEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEc
Confidence 7754321 0 01112222 1111 2332 367888999999999987 5555443332100 00
Q ss_pred ----------------------------cEEEEEECCCCCEEEEEe---------------------------------C
Q 010362 443 ----------------------------DFVAACVSPKGEWIYCVG---------------------------------E 461 (512)
Q Consensus 443 ----------------------------~~~~~~~s~~g~~l~~g~---------------------------------~ 461 (512)
....++++|+...+++.. .
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~ 464 (582)
T 1flg_A 385 EGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDH 464 (582)
T ss_dssp TTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSC
T ss_pred cccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCC
Confidence 011345666655555433 2
Q ss_pred CCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEecC
Q 010362 462 DRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 462 dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~~ 512 (512)
+|.|..||+.+|+.+-....+. ++..-.....+.+++.++.||.++.||+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 5889999999999876655332 2221111224667778999999999985
No 268
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.85 E-value=8.3e-07 Score=88.39 Aligned_cols=271 Identities=11% Similarity=0.089 Sum_probs=159.3
Q ss_pred EEECCCCCE----EEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeE-EEEcCCCCeEEEEe------CCCeE
Q 010362 219 ARFSPDGQF----LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLC-IEFSRDSEMLASGS------QDGKI 287 (512)
Q Consensus 219 ~~~s~~~~~----l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~s~~~~~l~s~~------~dg~i 287 (512)
++++|.+.. +++++.|+.+.-+|..+|+........... ....+.+ .... ++ .+++++ .+|.|
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~----~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v 184 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIK----VGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYL 184 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGG----GTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCC----ccceeecCCEEE-CC-EEEEEecccccCCCCeE
Confidence 455444444 888888999999999999887654321100 0001111 0111 34 455554 37999
Q ss_pred EEEEccCCeeeEEecccccc------------------------------------Ce-EEEEEecCCCEEEEEeCC---
Q 010362 288 KVWRIRSGQCLRRLERAHSE------------------------------------GV-TSLVFSRDGSQILSTSFD--- 327 (512)
Q Consensus 288 ~vwd~~~~~~~~~~~~~~~~------------------------------------~i-~~~~~~~~~~~l~~~~~d--- 327 (512)
+.+|..+|+.+.++...... .+ ..+++.++...++.++.+
T Consensus 185 ~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p 264 (599)
T 1w6s_A 185 TAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAP 264 (599)
T ss_dssp EEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSC
T ss_pred EEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcc
Confidence 99999999988877532111 00 134566777788887765
Q ss_pred -------------CcEEEEeCCCCceeEEeeCCcc----------ceeEEEEc-CCC---CEEEEEeCCCcEEEEeCCCC
Q 010362 328 -------------STARIHGLKSGKLLKEFRGHSS----------YVNDAIFT-NDG---SRVVTASSDCTVKVWDLKST 380 (512)
Q Consensus 328 -------------g~v~i~d~~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~ 380 (512)
+.|..+|.++|+.+..++.... ++. +... .+| ..++.++.+|.+.++|.+++
T Consensus 265 ~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 343 (599)
T 1w6s_A 265 WNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDG 343 (599)
T ss_dssp SCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTC
T ss_pred ccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCC
Confidence 3799999999999888765321 111 2222 467 46777889999999999999
Q ss_pred ceeeecCCCCCC------C-CCCce--------------------------eEEEEEcCCCCCeEEEE------------
Q 010362 381 DCLQTFKPPPPL------R-GGDAS--------------------------VNSVHLFPKNPDHIVVC------------ 415 (512)
Q Consensus 381 ~~~~~~~~~~~~------~-~~~~~--------------------------i~~~~~~~~~~~~l~~~------------ 415 (512)
+.+......... . ....+ -..++++|.. .++++.
T Consensus 344 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~-~~~yv~~~~~~~~~~~~~ 422 (599)
T 1w6s_A 344 ALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR-ELFFMGINHICMDWEPFM 422 (599)
T ss_dssp CEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT-TEEEEEEECEEEEEEECC
T ss_pred CEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC-CEEEEeccccceeeeccc
Confidence 887665422100 0 00000 0123444443 222211
Q ss_pred ---------------------c------CCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEE
Q 010362 416 ---------------------N------KTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYC 467 (512)
Q Consensus 416 ---------------------~------~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~i 467 (512)
+ ..+.+..||+. ++.+-....... ...-.+...+..++.++.||.++.
T Consensus 423 ~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~----~~~g~~~tagg~vf~gt~dg~l~A 498 (599)
T 1w6s_A 423 LPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA----VWGGTMATAGDLVFYGTLDGYLKA 498 (599)
T ss_dssp CCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC----CCSBCEEETTTEEEEECTTSEEEE
T ss_pred ccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC----ccCcceEecCCEEEEECCCCeEEE
Confidence 1 34678888886 444444332211 111112235778888999999999
Q ss_pred EEcCCCeeEEeccccCCC-eEEEEEcCCCC-eEEEE
Q 010362 468 FSHQSGKLEHLMKVHEKD-VIGVTHHPHRN-LLATY 501 (512)
Q Consensus 468 wd~~~~~~~~~~~~h~~~-v~~v~~~p~~~-~l~s~ 501 (512)
||.++|+.+-.++..... ..-+.+..+|+ ++++.
T Consensus 499 ~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 499 RDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEE
Confidence 999999999877643321 12245556776 44443
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.85 E-value=4.9e-06 Score=78.64 Aligned_cols=254 Identities=10% Similarity=-0.001 Sum_probs=156.7
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEE-eCCCeEEEEEccC
Q 010362 216 AECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG-SQDGKIKVWRIRS 294 (512)
Q Consensus 216 v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~vwd~~~ 294 (512)
-+|.+..+.+ +|+.+. ...|+..++......... .....+..++|.+.+..|+.+ ...+.|..+++..
T Consensus 79 ~~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~~~---------~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g 147 (386)
T 3v65_B 79 RSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLL---------NNLENAIALDFHHRRELVFWSDVTLDRILRANLNG 147 (386)
T ss_dssp SCEEECSSCC-EEEEEC-BSCEEEECTTSCCCEEEE---------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CeECCccccc-eeEeec-CccceeeccCCCcEEEEe---------cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 3455555533 444443 456888887665432211 133568899999866555554 4568899999876
Q ss_pred CeeeEEeccccccCeEEEEEecCCCEEEE-EeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC-C-Cc
Q 010362 295 GQCLRRLERAHSEGVTSLVFSRDGSQILS-TSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS-D-CT 371 (512)
Q Consensus 295 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~ 371 (512)
+.....+. ........+++.+.+..|+. -...+.|.+.++........+.........++++|.+..|+.+.. . +.
T Consensus 148 ~~~~~~~~-~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~ 226 (386)
T 3v65_B 148 SNVEEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR 226 (386)
T ss_dssp CCEEEEEC-SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred CCcEEEEe-CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCE
Confidence 65433332 23345678889886555554 445678888888654433333334456789999987666655543 4 67
Q ss_pred EEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECC
Q 010362 372 VKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSP 451 (512)
Q Consensus 372 i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 451 (512)
|..+++.......... ......+.++++|.+..++++-...+.|..+++++.....+.... ......+++ .
T Consensus 227 I~r~~~dG~~~~~~~~------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~--~~~P~giav-~ 297 (386)
T 3v65_B 227 IEASSMDGSGRRIIAD------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITV-F 297 (386)
T ss_dssp EEEEETTSCSCEEEEC------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS--CSSEEEEEE-E
T ss_pred EEEEeCCCCCcEEEEE------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC--CCCceEEEE-E
Confidence 8888876543222211 112356889999888677777788889999999875444443322 234567777 3
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEE
Q 010362 452 KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT 490 (512)
Q Consensus 452 ~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~ 490 (512)
.+...++-...+.|..++..+|+....+........+|+
T Consensus 298 ~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~ 336 (386)
T 3v65_B 298 EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH 336 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEE
T ss_pred CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEE
Confidence 455555556788999999777766655543323333343
No 270
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.85 E-value=2e-06 Score=73.91 Aligned_cols=187 Identities=13% Similarity=0.121 Sum_probs=121.5
Q ss_pred cceeEEEEcCCCCeEEEEeCC--CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCCce
Q 010362 264 ETVLCIEFSRDSEMLASGSQD--GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKL 340 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~ 340 (512)
.-...+.|++ +.+..+.+.+ ..|+.+|+.+++.+.++.......-..++.. ++.|+.. -.++.+.+||..+.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcE
Confidence 3467999986 5666666665 4899999999999888763222222334443 4555544 4578999999999999
Q ss_pred eEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCc
Q 010362 341 LKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS 420 (512)
Q Consensus 341 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~ 420 (512)
+.++..... -..++ +++..|+.+..++.|.++|..+.+...++.... .+
T Consensus 98 ~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~----------------~g------------ 146 (243)
T 3mbr_X 98 RARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA----------------GG------------ 146 (243)
T ss_dssp EEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE----------------TT------------
T ss_pred EEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc----------------CC------------
Confidence 998875432 23444 566777777778899999999877665543210 00
Q ss_pred EEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecccc-------------CCCeE
Q 010362 421 IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH-------------EKDVI 487 (512)
Q Consensus 421 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~ 487 (512)
..-..++.+.+. +|+..+..-.+..|.+.|..+|+.+..+... .+..+
T Consensus 147 ------------------~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlN 207 (243)
T 3mbr_X 147 ------------------RPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLN 207 (243)
T ss_dssp ------------------EECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEE
T ss_pred ------------------cccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceE
Confidence 001123334443 5554444436778999999999888765421 23578
Q ss_pred EEEEcCCCCeEEEEEC
Q 010362 488 GVTHHPHRNLLATYGE 503 (512)
Q Consensus 488 ~v~~~p~~~~l~s~~~ 503 (512)
+|+++|+++.|...|.
T Consensus 208 GIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 208 GIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred EEEEcCCCCEEEEECC
Confidence 9999997766655553
No 271
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.84 E-value=5.1e-07 Score=78.28 Aligned_cols=193 Identities=12% Similarity=0.088 Sum_probs=126.5
Q ss_pred eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCcc-ceeEEEEcCCCCEEEEEeCCCcEEE
Q 010362 296 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSS-YVNDAIFTNDGSRVVTASSDCTVKV 374 (512)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~i 374 (512)
+.+.++......-...+.|+ ++.++.+.+.+|.|+.+|+++++.+..+ -... .-..+++..+ ...++.-.++.+.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGE-RLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS-CEEEEESSSCEEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC-EEEEEEccCCEEEE
Confidence 44555542333445788887 4566667777889999999999998877 3222 1233555433 44455556889999
Q ss_pred EeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-eEEEEeeCCc--ccCCcEEEEEECC
Q 010362 375 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-QVVKSFSSGK--REGGDFVAACVSP 451 (512)
Q Consensus 375 wd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~s~ 451 (512)
||..+.+.+.++.... . -..++ +++ ..++.+..++.|.++|... +....+.... ..-..++.+.|.
T Consensus 121 ~D~~Tl~~~~ti~~~~----e---GwGLt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~- 189 (268)
T 3nok_A 121 WSGMPPQRERTTRYSG----E---GWGLC--YWN-GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA- 189 (268)
T ss_dssp EETTTTEEEEEEECSS----C---CCCEE--EET-TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EECCcCcEEEEEeCCC----c---eeEEe--cCC-CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-
Confidence 9999999999887532 1 12333 445 5666667799999999884 4444444322 112234566666
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCeeEEecccc-------------CCCeEEEEEcCCCCeEEEEE
Q 010362 452 KGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH-------------EKDVIGVTHHPHRNLLATYG 502 (512)
Q Consensus 452 ~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~l~s~~ 502 (512)
+|+..+..-.++.|.+.|..+|+.+..+... .+..+.|+|+|+++.|...+
T Consensus 190 dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 190 NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 7754444446889999999999988776532 13578999999766555444
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.82 E-value=1.4e-06 Score=90.16 Aligned_cols=243 Identities=11% Similarity=0.015 Sum_probs=136.1
Q ss_pred ceEEEEEC-CCCCEEEEEeC-CC----eEEEEEcCCC-eeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC---
Q 010362 215 HAECARFS-PDGQFLVSCSF-DG----FIEVWDYLSG-KLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD--- 284 (512)
Q Consensus 215 ~v~~~~~s-~~~~~l~sg~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d--- 284 (512)
.+...+|| |||++||.+.. +| .|+++|+.++ +.... .+. .....++|+|||+.|+....|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------~~~---~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------KVS---GTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------CEE---EECSCCEECSSTTEEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------ccc---CceeeEEEecCCCEEEEEEECCCC
Confidence 57889999 99999886543 23 5999999988 63211 111 124578899999988887765
Q ss_pred --CeEEEEEccCCee--eEEeccccccCeEEEEEecCCCEEEEEeC---CCcEEEEeCCCCc-ee--EEe-eCCccceeE
Q 010362 285 --GKIKVWRIRSGQC--LRRLERAHSEGVTSLVFSRDGSQILSTSF---DSTARIHGLKSGK-LL--KEF-RGHSSYVND 353 (512)
Q Consensus 285 --g~i~vwd~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~v~i~d~~~~~-~~--~~~-~~~~~~v~~ 353 (512)
..|.++++.++.. ...+..........+.|+|||++|+..+. ...|+++|+.++. .. ..+ ........+
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 2588888877642 22222123345678899999999887653 3468889987752 22 333 233444555
Q ss_pred EEEcCCCCEEEEEeCC----CcEEEEeCCCCceeee-cCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCc--EEEEec
Q 010362 354 AIFTNDGSRVVTASSD----CTVKVWDLKSTDCLQT-FKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS--IYIMTL 426 (512)
Q Consensus 354 ~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~--i~~~~~ 426 (512)
+.|+.++.+++.+..+ ..|..+|+.++..... +... .....+..+.+. +..++++...++. ++++++
T Consensus 325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~----~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH----SEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC----CSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC----CCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 5554444344444443 2566667654211111 1111 112244555554 4456677777775 555564
Q ss_pred -------CCeE-EEEeeCCcccCCcEEEEEE----CCCCC-EEEEEeCC---CeEEEEEcCCCee
Q 010362 427 -------QGQV-VKSFSSGKREGGDFVAACV----SPKGE-WIYCVGED---RNLYCFSHQSGKL 475 (512)
Q Consensus 427 -------~~~~-~~~~~~~~~~~~~~~~~~~----s~~g~-~l~~g~~d---g~i~iwd~~~~~~ 475 (512)
.+.. ...+.... ...+..+.+ ++++. ++++.+.. +.++.+|+.+++.
T Consensus 399 ~~~~~~~~~g~~~~~l~l~~--~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 399 DSQDGVFKAGTGLREVVMEE--PIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp CTTTSCCCTTTCCEECCCCC--SSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred ccccccccCCccceEECCCC--ceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 3322 33332111 122333332 44655 44444332 4688888877653
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.79 E-value=1.9e-05 Score=73.40 Aligned_cols=235 Identities=9% Similarity=0.003 Sum_probs=147.3
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeE
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLK 342 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~ 342 (512)
...+|.+..++. +|+.+. ...|+..++.......... ....+..++|++.+..|+.+. ..+.|..+++.......
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 344566666643 444443 3458888876655433332 345588999998666666554 56789999987665444
Q ss_pred EeeCCccceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-Cc
Q 010362 343 EFRGHSSYVNDAIFTNDGSRV-VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SS 420 (512)
Q Consensus 343 ~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-~~ 420 (512)
.+.........+++.+.+..| ++-...+.|.+.++........+. ........+++.|.+..++++-... +.
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~------~~l~~P~~iavdp~~g~ly~td~~~~~~ 183 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW------QSLEKPRAIALHPMEGTIYWTDWGNTPR 183 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------TTCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe------CCCCCcceEEEecCcCeEEEeccCCCCE
Confidence 333333456789999755544 555567889999987543222221 1224568899999875666666666 88
Q ss_pred EEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEE
Q 010362 421 IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLA 499 (512)
Q Consensus 421 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 499 (512)
|..+++++.....+... .......++++|++..|+.+. ..+.|..+|.........+........++++. .+.+++
T Consensus 184 I~r~~~dG~~~~~~~~~--~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~ 260 (349)
T 3v64_C 184 IEASSMDGSGRRIIADT--HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYW 260 (349)
T ss_dssp EEEEETTSCSCEESCCS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEE
T ss_pred EEEEeCCCCCcEEEEEC--CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEE
Confidence 99999987655544322 133468899998777776665 56789999986544333333334456677773 445555
Q ss_pred EEECCCeEEEec
Q 010362 500 TYGEDCTMKLWK 511 (512)
Q Consensus 500 s~~~dg~i~iW~ 511 (512)
+-...+.|...+
T Consensus 261 td~~~~~V~~~~ 272 (349)
T 3v64_C 261 TDWHTKSINSAN 272 (349)
T ss_dssp EETTTTEEEEEE
T ss_pred ecCCCCeEEEEE
Confidence 555566666554
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=7.5e-06 Score=78.52 Aligned_cols=238 Identities=9% Similarity=0.085 Sum_probs=147.5
Q ss_pred ceeEEEEcC-CCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCC-C----cEEEEeCCCC
Q 010362 265 TVLCIEFSR-DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-S----TARIHGLKSG 338 (512)
Q Consensus 265 ~v~~l~~s~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g----~v~i~d~~~~ 338 (512)
....++++| ++..|..+...+.|+.+|+.++...... ........++|+++++.|+++... + .+..++. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~--~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY--SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE--CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe--cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 467899998 4666766666588999998876644333 245668899999999977766542 1 3444443 33
Q ss_pred cee--EEeeCCccceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEE
Q 010362 339 KLL--KEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVC 415 (512)
Q Consensus 339 ~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 415 (512)
... ..+.. ......++++| ++..+++-..++.|..++..++......... .......++++|++..++++.
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-----~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-----DSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS-----SSSCCEEEEECTTSSEEEEEE
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC-----CCCcceeEEEcCCCCEEEEEE
Confidence 222 22222 23467789999 6776666667789999998866542222111 123467899999985477777
Q ss_pred cCCCcEEEEecCCe--EE---EEeeCC--c---c-------cCCcEE-EEEEC--------CCCCEEEEEeCCCeEEEEE
Q 010362 416 NKTSSIYIMTLQGQ--VV---KSFSSG--K---R-------EGGDFV-AACVS--------PKGEWIYCVGEDRNLYCFS 469 (512)
Q Consensus 416 ~~~~~i~~~~~~~~--~~---~~~~~~--~---~-------~~~~~~-~~~~s--------~~g~~l~~g~~dg~i~iwd 469 (512)
...+.|..++.++. .. ..+... . . .-.... .+++. ++|.+.++-..++.|+.++
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 78889999887742 11 111111 0 0 001122 45553 4566666666778899998
Q ss_pred cCCCeeEEeccc----c-------------CCCeEEEEEcC-CCCeEEEEECCCeEEEecC
Q 010362 470 HQSGKLEHLMKV----H-------------EKDVIGVTHHP-HRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 470 ~~~~~~~~~~~~----h-------------~~~v~~v~~~p-~~~~l~s~~~dg~i~iW~~ 512 (512)
.+|........ . -.....|+++| ++.++++-...++|+..+|
T Consensus 369 -~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 369 -PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp -TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred -CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 45654433211 0 12478999999 4666666667778887653
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.70 E-value=6.6e-05 Score=68.80 Aligned_cols=223 Identities=11% Similarity=-0.012 Sum_probs=139.3
Q ss_pred eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCC----CceeEEeeCCccce
Q 010362 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKS----GKLLKEFRGHSSYV 351 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~----~~~~~~~~~~~~~v 351 (512)
+|+.+. ...|+..|+.+......+. ....+..++|++.+..|+.+. .++.|..+++.. ......+...-..+
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 344443 3568999998876555443 345688999998766666554 468899999875 22222232222456
Q ss_pred eEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-CcEEEEecCCe
Q 010362 352 NDAIFTNDGSRV-VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQ 429 (512)
Q Consensus 352 ~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-~~i~~~~~~~~ 429 (512)
..+++++.+..| ++-...+.|.++|+........+. ........+++.|.+..++++.... +.|...++++.
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~------~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE------CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 789998755444 555667889999987543322221 1123568899999775566655444 78999999877
Q ss_pred EEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccc--cCCCeEEEEEcCCCCeEEEEECCCe
Q 010362 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKV--HEKDVIGVTHHPHRNLLATYGEDCT 506 (512)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~~~dg~ 506 (512)
....+.... -.....+++++++..|+.+. ..+.|..+|............ ......++++. .+.++++-...+.
T Consensus 154 ~~~~~~~~~--~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 154 DIYSLVTEN--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 230 (316)
T ss_dssp CEEEEECSS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE
T ss_pred CeEEEEECC--CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe
Confidence 655543321 24577999999877776665 667999999874332222221 22345677775 3555556556677
Q ss_pred EEEec
Q 010362 507 MKLWK 511 (512)
Q Consensus 507 i~iW~ 511 (512)
|..++
T Consensus 231 V~~~~ 235 (316)
T 1ijq_A 231 IFSAN 235 (316)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77665
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.69 E-value=2.2e-05 Score=74.15 Aligned_cols=233 Identities=9% Similarity=-0.009 Sum_probs=146.5
Q ss_pred eeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCCceeEEe
Q 010362 266 VLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKLLKEF 344 (512)
Q Consensus 266 v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~ 344 (512)
-.|.+..+. .+|+.+. ...|+.+++..+....... ....+..++|++.+..|+.+ ...+.|+.+++........+
T Consensus 79 ~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 79 RSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp SCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred CeECCcccc-ceeEeec-CccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 345555553 3444443 4578888887665443332 34568899999866666555 45678999998766544434
Q ss_pred eCCccceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-CcEE
Q 010362 345 RGHSSYVNDAIFTNDGSRV-VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIY 422 (512)
Q Consensus 345 ~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-~~i~ 422 (512)
.........+++.+.+..| ++-...+.|.+.++........+. ........+++.|.+..++++-... +.|.
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~------~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW------QSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC------SSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec------CCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 3333456788999755544 555556788888886543222221 1224568899999875666666565 7899
Q ss_pred EEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEE
Q 010362 423 IMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 501 (512)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 501 (512)
.+++++.....+.... -.....++++|++..|+.+. ..+.|..+|.........+........++++ ..+.++++-
T Consensus 229 r~~~dG~~~~~~~~~~--~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td 305 (386)
T 3v65_B 229 ASSMDGSGRRIIADTH--LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTD 305 (386)
T ss_dssp EEETTSCSCEEEECSS--CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEE
T ss_pred EEeCCCCCcEEEEECC--CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEee
Confidence 9999876554443321 23467899998777776665 6678999998654433333333445677887 344555565
Q ss_pred ECCCeEEEec
Q 010362 502 GEDCTMKLWK 511 (512)
Q Consensus 502 ~~dg~i~iW~ 511 (512)
...+.|..++
T Consensus 306 ~~~~~V~~~~ 315 (386)
T 3v65_B 306 WHTKSINSAN 315 (386)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 5667776654
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.69 E-value=2.3e-05 Score=71.76 Aligned_cols=230 Identities=9% Similarity=-0.004 Sum_probs=142.6
Q ss_pred CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEE-eCCCeEEEEEccCCeeeEEeccccccCeEEE
Q 010362 234 DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG-SQDGKIKVWRIRSGQCLRRLERAHSEGVTSL 312 (512)
Q Consensus 234 dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~ 312 (512)
...|+..+++.......+. ......+..++|.+.+..|..+ ...+.|..+++..+.....+....-.....+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~-------~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIV-------VGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEEEEETTCTTSCCEEE-------EEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred cCeEEEEECCCCceEEEEE-------ecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 4678888887653111111 1122456789999865555444 4567899999876632222211223456788
Q ss_pred EEecCCCEEE-EEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCceeeecCCC
Q 010362 313 VFSRDGSQIL-STSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS--SDCTVKVWDLKSTDCLQTFKPP 389 (512)
Q Consensus 313 ~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~ 389 (512)
++.+.+..|+ +-...+.|.++++........+.........+++.|.+..|+.+. ..+.|...++..... ..+..
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~- 162 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN- 162 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEEC-
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEE-
Confidence 9987555554 445567899999865433333333445678999999766666555 257888888764322 22211
Q ss_pred CCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Q 010362 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFS 469 (512)
Q Consensus 390 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd 469 (512)
..-...+.++++|.+..++++-...+.|..+++++.....+.... ......+++. .+..+++-...+.|..++
T Consensus 163 ----~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~--~~~P~glav~-~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 163 ----SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--LPHPFALTLF-EDILYWTDWSTHSILACN 235 (318)
T ss_dssp ----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC--CSCEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred ----CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC--CCCceEEEEe-CCEEEEEecCCCeEEEEE
Confidence 112356899999988677777788899999999875544444321 2345667774 334445555778999999
Q ss_pred cCCCeeEEec
Q 010362 470 HQSGKLEHLM 479 (512)
Q Consensus 470 ~~~~~~~~~~ 479 (512)
..+|+....+
T Consensus 236 ~~~G~~~~~i 245 (318)
T 3sov_A 236 KYTGEGLREI 245 (318)
T ss_dssp TTTCCSCEEE
T ss_pred CCCCCceEEE
Confidence 8777654443
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=1.8e-05 Score=75.79 Aligned_cols=245 Identities=10% Similarity=0.036 Sum_probs=140.9
Q ss_pred ceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC-C----eEE
Q 010362 215 HAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD-G----KIK 288 (512)
Q Consensus 215 ~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-g----~i~ 288 (512)
....++++| ++..|.++...+.|..+|..++...... ........++|++++++|+.+... + .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~---------~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY---------SGLSKVRTICWTHEADSMIITNDQNNNDRPNNY 208 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE---------CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe---------cCCCCcceEEEeCCCCEEEEEeCCCCcccceEE
Confidence 457899998 4556666665588999998776543321 134568899999999966666542 2 233
Q ss_pred EEEccCCeee--EEeccccccCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeEEeeC-CccceeEEEEcCCCCEEE
Q 010362 289 VWRIRSGQCL--RRLERAHSEGVTSLVFSR-DGSQILSTSFDSTARIHGLKSGKLLKEFRG-HSSYVNDAIFTNDGSRVV 364 (512)
Q Consensus 289 vwd~~~~~~~--~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~ 364 (512)
+++ ..+... ..+. .......++++| ++..+++-..++.|..++..++........ .......++|+|+|++|+
T Consensus 209 ~~~-~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 209 ILT-RESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp EEE-GGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred EEe-CCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 344 333322 2222 234467788999 666555655678999999876654222222 223577899999999554
Q ss_pred EE-eCCCcEEEEeCCCC--ce--eeecCCCCCCCC---------CCceeE-EEEEcCC-------CCCeEEEEcCCCcEE
Q 010362 365 TA-SSDCTVKVWDLKST--DC--LQTFKPPPPLRG---------GDASVN-SVHLFPK-------NPDHIVVCNKTSSIY 422 (512)
Q Consensus 365 ~~-~~dg~i~iwd~~~~--~~--~~~~~~~~~~~~---------~~~~i~-~~~~~~~-------~~~~l~~~~~~~~i~ 422 (512)
.+ ...+.|..++.... .. ...+.......+ .-.... .+...+. ...++++-.....|+
T Consensus 286 v~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~ 365 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIR 365 (430)
T ss_dssp EEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEE
T ss_pred EEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEE
Confidence 44 55778999876532 11 111110000000 011122 4444321 124555556677888
Q ss_pred EEecCCeEEEEeeCCc---c---c--------CCcEEEEEECCC-CCEEEEEeCCCeEEEEEcC
Q 010362 423 IMTLQGQVVKSFSSGK---R---E--------GGDFVAACVSPK-GEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 423 ~~~~~~~~~~~~~~~~---~---~--------~~~~~~~~~s~~-g~~l~~g~~dg~i~iwd~~ 471 (512)
.++..+.......... . . -.....++++|+ |.++++-..+..|+.++..
T Consensus 366 ~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 366 ILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 8886665443332210 0 0 124678999985 5555555567778877653
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.66 E-value=1.8e-05 Score=75.92 Aligned_cols=239 Identities=8% Similarity=0.051 Sum_probs=147.6
Q ss_pred ceeEEEEcCC--CCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCC-----cEEEEeCCC
Q 010362 265 TVLCIEFSRD--SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS-----TARIHGLKS 337 (512)
Q Consensus 265 ~v~~l~~s~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~i~d~~~ 337 (512)
....++|+|+ +..|..+...+.|+.+|..++...... ........++++++|+ |+++...+ .+...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~--~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT--TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC--CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee--cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 4679999994 445666655589999998887755443 3455689999999999 55554322 233333322
Q ss_pred Cce-eEEeeCCccceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEE
Q 010362 338 GKL-LKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVC 415 (512)
Q Consensus 338 ~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 415 (512)
+.. ...+. .......++++| ++..+++-..++.|+.+|..++.....+.... .......++++|++..++++-
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~----~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD----TKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS----CCSSCEEEEECTTSSEEEEEE
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC----CCCCcccEEEeCCCCEEEEEe
Confidence 211 01222 223467789999 67666666667889999998776522221111 112234699999985577777
Q ss_pred cCCCcEEEEecCC--eEE---EEeeCC--c----------ccCCcEEEEEE---------CCCCCEEEEEeCCCeEEEEE
Q 010362 416 NKTSSIYIMTLQG--QVV---KSFSSG--K----------REGGDFVAACV---------SPKGEWIYCVGEDRNLYCFS 469 (512)
Q Consensus 416 ~~~~~i~~~~~~~--~~~---~~~~~~--~----------~~~~~~~~~~~---------s~~g~~l~~g~~dg~i~iwd 469 (512)
.....|+.++.+. ... ..+... . ..-.....+++ .++|++.++-..++.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 7788999988762 111 111111 0 01123567888 77888777777888999998
Q ss_pred cCCCeeEEeccc-----------------cCCCeEEEEEc-CCCCeEEEEECCCeEEEecC
Q 010362 470 HQSGKLEHLMKV-----------------HEKDVIGVTHH-PHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 470 ~~~~~~~~~~~~-----------------h~~~v~~v~~~-p~~~~l~s~~~dg~i~iW~~ 512 (512)
. +|........ .-.....|+++ +++.++++=...++|+..++
T Consensus 372 ~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 372 P-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp T-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred C-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 5 5654432211 01237789999 57777776667788887653
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.66 E-value=0.00025 Score=65.27 Aligned_cols=278 Identities=10% Similarity=0.044 Sum_probs=152.5
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEE
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVW 290 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vw 290 (512)
.....+.++.|.+++..+++| .+|.| +...+.++.-...... .......+.++.+.+ +..++ ++.+|.|..
T Consensus 33 ~~~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~----~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~- 103 (327)
T 2xbg_A 33 PTTATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLV----LDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH- 103 (327)
T ss_dssp SCSSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCC----CSCCCCEEEEEEEET-TEEEE-EEETTEEEE-
T ss_pred CCCCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCC----CCCCCccEEEEEecC-CeEEE-EECCCeEEE-
Confidence 334578999999888888754 57765 3333444321111110 011245688999986 44444 455664443
Q ss_pred EccCCeeeEEecc--ccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEe-eCCccceeEEEEcCCCCEEEEEe
Q 010362 291 RIRSGQCLRRLER--AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEF-RGHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 291 d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
..+.|+.-..... .+...+..+.+.+++..++++ .+|.|..- ...++.-... ......+..+.+.+++.+++.+.
T Consensus 104 S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~ 181 (327)
T 2xbg_A 104 TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS 181 (327)
T ss_dssp ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET
T ss_pred ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC
Confidence 2233443333321 133457788887777655554 46655332 2234333322 33455788999999888776654
Q ss_pred CCCcEEE-EeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCC-cccCCcE
Q 010362 368 SDCTVKV-WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSG-KREGGDF 444 (512)
Q Consensus 368 ~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~-~~~~~~~ 444 (512)
+|.+.. .|- .+..-..+.. .....+..+.+.+++ . +++.+.+|.++..+.+ +......... ......+
T Consensus 182 -~G~~~~S~d~-gG~tW~~~~~-----~~~~~~~~~~~~~~g-~-~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~ 252 (327)
T 2xbg_A 182 -RGSFYSTWEP-GQTAWEPHNR-----TTSRRLHNMGFTPDG-R-LWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGF 252 (327)
T ss_dssp -TSSEEEEECT-TCSSCEEEEC-----CSSSCEEEEEECTTS-C-EEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCE
T ss_pred -CCcEEEEeCC-CCCceeECCC-----CCCCccceeEECCCC-C-EEEEeCCceEEEecCCCCCeeEeccCCcccCCcce
Confidence 454443 332 1221111111 123467788887765 4 4455567777776434 3333322222 1122357
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEecc---ccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 445 VAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK---VHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 445 ~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
..+.+.+++..++++. +|.+ .+....|+.-..+. .....+.++.|.+++. ++.++.+|.|.-++
T Consensus 253 ~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 253 LDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 8888988887766655 6766 34444454333333 2345678898875544 66677899887765
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.64 E-value=3.2e-05 Score=74.09 Aligned_cols=244 Identities=9% Similarity=0.045 Sum_probs=139.9
Q ss_pred ceEEEEECCC--CCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC-----eE
Q 010362 215 HAECARFSPD--GQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG-----KI 287 (512)
Q Consensus 215 ~v~~~~~s~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg-----~i 287 (512)
....++|+|+ +..|..+...+.|+.+|..++....... ......+++++++|+ |+.+...+ .+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~---------~~~~P~giavd~dG~-lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT---------NIGQCADVNFTLNGD-MVVVDDQSSDTNTGI 209 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC---------CCSCEEEEEECTTCC-EEEEECCSCTTSEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec---------CCCCccEEEECCCCC-EEEEcCCCCcccceE
Confidence 4678999994 4455555444899999987776543221 345688999999999 44444321 23
Q ss_pred EEEEccCCeee-EEeccccccCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCceeEEe-eC-CccceeEEEEcCCCCEE
Q 010362 288 KVWRIRSGQCL-RRLERAHSEGVTSLVFSR-DGSQILSTSFDSTARIHGLKSGKLLKEF-RG-HSSYVNDAIFTNDGSRV 363 (512)
Q Consensus 288 ~vwd~~~~~~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l 363 (512)
...+...+... ..+ ..-.....++++| ++...++-..++.|+.+|..++.....+ .. .......++|+|++++|
T Consensus 210 ~~~~~~~~~~~~~~~--~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~L 287 (433)
T 4hw6_A 210 YLFTRASGFTERLSL--CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWA 287 (433)
T ss_dssp EEECGGGTTCCEEEE--EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEE
T ss_pred EEEECCCCeeccccc--cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEE
Confidence 33332222110 111 1234466788999 6665555556788999998877663332 21 12223469999999955
Q ss_pred EEE-eCCCcEEEEeCCC--Ccee--eecCCC---CCC------CCCCceeEEEEE---------cCCCCCeEEEEcCCCc
Q 010362 364 VTA-SSDCTVKVWDLKS--TDCL--QTFKPP---PPL------RGGDASVNSVHL---------FPKNPDHIVVCNKTSS 420 (512)
Q Consensus 364 ~~~-~~dg~i~iwd~~~--~~~~--~~~~~~---~~~------~~~~~~i~~~~~---------~~~~~~~l~~~~~~~~ 420 (512)
+.+ ...+.|..++... +... ..+... ... ...-.....+++ .+.+ .++++-.....
T Consensus 288 Yvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~lyvaD~~n~~ 366 (433)
T 4hw6_A 288 YIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFYFCDRDSHT 366 (433)
T ss_dssp EEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEEEEETTTTE
T ss_pred EEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEEEEECCCCE
Confidence 554 4567899988652 2211 111100 000 001123566787 3433 56666677788
Q ss_pred EEEEecCCeEEEEeeCCc------c--------cCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEcC
Q 010362 421 IYIMTLQGQVVKSFSSGK------R--------EGGDFVAACVS-PKGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 421 i~~~~~~~~~~~~~~~~~------~--------~~~~~~~~~~s-~~g~~l~~g~~dg~i~iwd~~ 471 (512)
|+.++..+.......... . .-.....++++ ++|.++++-..++.|+.++++
T Consensus 367 I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 367 VRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 999987764433322111 0 01235678888 566666555567778777653
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.63 E-value=8.7e-05 Score=64.76 Aligned_cols=205 Identities=13% Similarity=0.156 Sum_probs=129.2
Q ss_pred ccccCeEEEEEecCCCEEE-EEeCCCcEEEEeCCCCceeEEeeCC-ccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 010362 304 AHSEGVTSLVFSRDGSQIL-STSFDSTARIHGLKSGKLLKEFRGH-SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD 381 (512)
Q Consensus 304 ~~~~~i~~~~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 381 (512)
+-...+..++|+|+++.|+ +...++.|...|.. ++.+..+.-. ......+++.+++.++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 4446799999999876555 46778899999997 8888877432 2457888999988776766667889999876544
Q ss_pred e---eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC-cEEEEec--CCeEEEEeeC----CcccCCcEEEEEECC
Q 010362 382 C---LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS-SIYIMTL--QGQVVKSFSS----GKREGGDFVAACVSP 451 (512)
Q Consensus 382 ~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~-~i~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~s~ 451 (512)
. ......+............+++.|.+..++++.-.+. .++.|+- .+........ .......+..+++.|
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 2 2222211111223556789999999855555554444 4454541 1111111111 011223467889988
Q ss_pred CCC-EEEEEeCCCeEEEEEcCCCeeEEeccccC---------CCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 452 KGE-WIYCVGEDRNLYCFSHQSGKLEHLMKVHE---------KDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 452 ~g~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~---------~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
... +++.......+.++|.. |+.+..+.-.. ...-.|+|.|+|+++++ ++-+.+++++
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 654 55555577889999965 55555443221 24579999999986655 6777776664
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.52 E-value=0.00016 Score=74.30 Aligned_cols=229 Identities=13% Similarity=0.043 Sum_probs=139.9
Q ss_pred CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEE-EEeCCCeEEEEEccCCe---eeEEeccccccCe
Q 010362 234 DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLA-SGSQDGKIKVWRIRSGQ---CLRRLERAHSEGV 309 (512)
Q Consensus 234 dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~-s~~~dg~i~vwd~~~~~---~~~~~~~~~~~~i 309 (512)
...|+..++....... +......+..|+|.+.+..|+ +-...+.|+.+++.... ....+........
T Consensus 403 ~~~Ir~i~l~~~~~~~---------l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTS---------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp BSSEEEECTTSCCCEE---------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred ccceeEeeccCCccee---------eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 3456666665443221 112345678999998555554 44456789888886531 1122221234567
Q ss_pred EEEEEecCCCEEEEE-eCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCceeeec
Q 010362 310 TSLVFSRDGSQILST-SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS--DCTVKVWDLKSTDCLQTF 386 (512)
Q Consensus 310 ~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~ 386 (512)
..|++.+.+..|+.+ ...+.|.+.++........+.........|+++|.+..|+.+.. .+.|...++........+
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 789999877655555 45678999998654443333334456889999997666665543 267888888754432222
Q ss_pred CCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEE-eCCCeE
Q 010362 387 KPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCV-GEDRNL 465 (512)
Q Consensus 387 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g-~~dg~i 465 (512)
. ..-.....|++.+....++++-.....|...++++.....+......-.....+++. +.+|+.. ...+.|
T Consensus 554 ~------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 554 T------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 625 (791)
T ss_dssp C------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEE
T ss_pred e------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEE
Confidence 2 122467889999888677777777788999999876555554332222234566663 3355544 467889
Q ss_pred EEEEcCCCeeEEec
Q 010362 466 YCFSHQSGKLEHLM 479 (512)
Q Consensus 466 ~iwd~~~~~~~~~~ 479 (512)
...|..+|+.+..+
T Consensus 626 ~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 626 FSANRLTGSDVNLL 639 (791)
T ss_dssp EEEETTTCCCCEEE
T ss_pred EEEeCCCCcceEEe
Confidence 88888777655444
No 284
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.51 E-value=2e-05 Score=81.60 Aligned_cols=195 Identities=12% Similarity=0.135 Sum_probs=113.0
Q ss_pred ceeEEEEc-CCCCeEEEEeC-CC----eEEEEEccCC-eeeEEeccccccCeEEEEEecCCCEEEEEeCC-----CcEEE
Q 010362 265 TVLCIEFS-RDSEMLASGSQ-DG----KIKVWRIRSG-QCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-----STARI 332 (512)
Q Consensus 265 ~v~~l~~s-~~~~~l~s~~~-dg----~i~vwd~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~i 332 (512)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+... .......++|+|||+.|+....+ ..|+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~---~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK---VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC---EEEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc---ccCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99998886543 22 5999999998 632211 11224578899999988887765 36888
Q ss_pred EeCCCCce--eEEee-CCccceeEEEEcCCCCEEEEEeC---CCcEEEEeCCCCc-ee--eecCCCCCCCCCCceeEEEE
Q 010362 333 HGLKSGKL--LKEFR-GHSSYVNDAIFTNDGSRVVTASS---DCTVKVWDLKSTD-CL--QTFKPPPPLRGGDASVNSVH 403 (512)
Q Consensus 333 ~d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~-~~--~~~~~~~~~~~~~~~i~~~~ 403 (512)
+++.++.. ...+. .......++.|+|||++|+..+. ...|.++|+.++. .. ..+.. .......++.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~-----~~~~~~~s~~ 326 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP-----REKGVRYDVQ 326 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC-----CCTTCCEEEE
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec-----CCCCceEEEe
Confidence 88877642 22332 22334667899999998876653 3458888987752 11 22221 1223444554
Q ss_pred EcCCCCCeEEEEcCC----CcEEEEecCC-eEEEE-eeCCcccCCcEEEEEECCCCCEEEEEeCCCe--EEEEEc
Q 010362 404 LFPKNPDHIVVCNKT----SSIYIMTLQG-QVVKS-FSSGKREGGDFVAACVSPKGEWIYCVGEDRN--LYCFSH 470 (512)
Q Consensus 404 ~~~~~~~~l~~~~~~----~~i~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~--i~iwd~ 470 (512)
|+. +..+++....+ ..|..+++.+ ..... +.... ....+..+.+. .+.++++...+|. |+++++
T Consensus 327 ~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~-~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 327 MHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS-EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC-SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC-CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 433 43555555543 3566666653 22111 11111 11133444444 2344555667775 556665
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.49 E-value=1.5e-06 Score=88.73 Aligned_cols=241 Identities=11% Similarity=0.011 Sum_probs=142.0
Q ss_pred CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe-CCCeEEEEEccC----CeeeEEeccccccC
Q 010362 234 DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-QDGKIKVWRIRS----GQCLRRLERAHSEG 308 (512)
Q Consensus 234 dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~vwd~~~----~~~~~~~~~~~~~~ 308 (512)
.+.|+..++.+......+. ....+..++|.+.+..|+.+. ..+.|+.+++.. ......+. .....
T Consensus 385 ~~~I~~id~~~~~~~~~~~---------~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~-~~~~~ 454 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP---------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQA 454 (699)
T ss_dssp TTC-CEECTTSCCEECCSC---------CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC-SCC--
T ss_pred ccceEEEeCCCCcceeeec---------cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe-CCCCC
Confidence 4567777776655433221 234567899998776666654 457899999875 22111111 11233
Q ss_pred eEEEEEecCCCEE-EEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCceeee
Q 010362 309 VTSLVFSRDGSQI-LSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS--DCTVKVWDLKSTDCLQT 385 (512)
Q Consensus 309 i~~~~~~~~~~~l-~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~ 385 (512)
...+++.+.+..| ++-...+.|.++++........+.........++++|.+.+|+.+.. .+.|..+++..... ..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YS 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eE
Confidence 5667887544444 44455688999998654433333333345678999996555554442 26788877654322 11
Q ss_pred cCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeE
Q 010362 386 FKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNL 465 (512)
Q Consensus 386 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i 465 (512)
+.. ..-...+.+++.|.+..++++-...+.|..+++.+.....+............+++..+ .++++....+.|
T Consensus 534 l~~-----~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V 607 (699)
T 1n7d_A 534 LVT-----ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAI 607 (699)
T ss_dssp ESC-----SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCE
T ss_pred EEe-----CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeE
Confidence 111 11234568999998878888888889999999987555444432211122334555433 344444567899
Q ss_pred EEEEcCCCeeEEeccccCCCeEEEEE
Q 010362 466 YCFSHQSGKLEHLMKVHEKDVIGVTH 491 (512)
Q Consensus 466 ~iwd~~~~~~~~~~~~h~~~v~~v~~ 491 (512)
..++..+|+.+..+......+..|++
T Consensus 608 ~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 608 FSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp EEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred EEEEccCCCceEEeecCCCCCcEEEE
Confidence 99999888888777543333444443
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.46 E-value=2.3e-05 Score=79.83 Aligned_cols=239 Identities=9% Similarity=-0.007 Sum_probs=134.9
Q ss_pred CcCceEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe-CC-----
Q 010362 212 TKSHAECARFSPDGQFLVSCS-FDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-QD----- 284 (512)
Q Consensus 212 h~~~v~~~~~s~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~d----- 284 (512)
+.....++++.++|+++++|+ .++.+.+||..+++-....... ....-.+++..+++++++.|+ .+
T Consensus 241 ~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~-------~~R~~~s~~~~~dg~iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 241 HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ-------VARGYQSSATMSDGRVFTIGGSWSGGVFE 313 (656)
T ss_dssp CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCS-------SCCSSCEEEECTTSCEEEECCCCCSSSCC
T ss_pred CCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCC-------ccccccceEEecCCeEEEEeCcccCCccc
Confidence 333444578889999999998 4568999998876543321110 111123455667899999998 34
Q ss_pred CeEEEEEccCCeeeEEec---cccccCeEEEEEecCCCEEEEEeCCC---------cEEEEeCCCCceeEEeeCCcc---
Q 010362 285 GKIKVWRIRSGQCLRRLE---RAHSEGVTSLVFSRDGSQILSTSFDS---------TARIHGLKSGKLLKEFRGHSS--- 349 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg---------~v~i~d~~~~~~~~~~~~~~~--- 349 (512)
..+.+||..+++....-. ......-....+..++..++.|+.+| .+..||..+.........+..
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred ccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 579999998876433200 00000000011223455555665444 467888877654433322211
Q ss_pred ------ceeEEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 350 ------YVNDAIFTN-DGSRVVTASSDC-----------TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 350 ------~v~~~~~~~-~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
.-.++.+.. +++.++.|+.++ .+.+||..+..-........+ ....-.+....|++ .+
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp---~~R~~~~~~~l~~g-~i 469 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY---FARTFHTSVVLPDG-ST 469 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS---SCCBSCEEEECTTS-CE
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC---CCcccCCeEECCCC-CE
Confidence 223344433 677777877542 677888877654332200110 11122344555666 77
Q ss_pred EEEEcCC-----------CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeC
Q 010362 412 IVVCNKT-----------SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGE 461 (512)
Q Consensus 412 l~~~~~~-----------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~ 461 (512)
+++++.+ ..+.+||.......................+.|+|+.+++|+.
T Consensus 470 ~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 470 FITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred EEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 7777654 4689999986655544433322222334566899999999984
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.45 E-value=0.00031 Score=66.57 Aligned_cols=223 Identities=10% Similarity=-0.024 Sum_probs=139.3
Q ss_pred eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCC----ceeEEeeCCccce
Q 010362 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSG----KLLKEFRGHSSYV 351 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~----~~~~~~~~~~~~v 351 (512)
+|+.+. ...|+..++......... .....+..++|++.+..|+.+. ..+.|+.+++... .....+.......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEec-cceeEEEccCCcceeEec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 444444 468999998876544443 3456789999998766666654 4678888988652 2233333334457
Q ss_pred eEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC-CCcEEEEecCCe
Q 010362 352 NDAIFTND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK-TSSIYIMTLQGQ 429 (512)
Q Consensus 352 ~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-~~~i~~~~~~~~ 429 (512)
..+++.+. ++++++-...+.|.+.++........+. ........+++.|.+..++++-.. .+.|...++++.
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 88999884 4455555567889999987654333222 122356889999977555555433 478999999876
Q ss_pred EEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccc--cCCCeEEEEEcCCCCeEEEEECCCe
Q 010362 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKV--HEKDVIGVTHHPHRNLLATYGEDCT 506 (512)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~~~dg~ 506 (512)
....+.... -.....+++++++..|+.+. ..+.|..+|+........... .-....++++. .+.++++-...+.
T Consensus 236 ~~~~~~~~~--l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~ 312 (400)
T 3p5b_L 236 DIYSLVTEN--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 312 (400)
T ss_dssp SCEEEECSS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS
T ss_pred ccEEEEECC--CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe
Confidence 555443321 23578899998888777765 567899999865443333322 22345567663 3345555555666
Q ss_pred EEEec
Q 010362 507 MKLWK 511 (512)
Q Consensus 507 i~iW~ 511 (512)
|..++
T Consensus 313 V~~~~ 317 (400)
T 3p5b_L 313 IFSAN 317 (400)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.44 E-value=0.00016 Score=66.07 Aligned_cols=224 Identities=9% Similarity=-0.059 Sum_probs=134.4
Q ss_pred EEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCCcee-EEeeCCccceeEEE
Q 010362 278 LASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKLL-KEFRGHSSYVNDAI 355 (512)
Q Consensus 278 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~-~~~~~~~~~v~~~~ 355 (512)
|+.+. ...|+..++................+..++|.+.+..|+.+ ...+.|..+++..+... ..+...-.....++
T Consensus 7 ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gla 85 (318)
T 3sov_A 7 LLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLA 85 (318)
T ss_dssp EEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEE
T ss_pred EEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEE
Confidence 44433 45789999876631111111223457789999865555554 45678999998765322 22222223467889
Q ss_pred EcCCCC-EEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc-CCCcEEEEecCCeEEEE
Q 010362 356 FTNDGS-RVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYIMTLQGQVVKS 433 (512)
Q Consensus 356 ~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~~~~i~~~~~~~~~~~~ 433 (512)
+.+.+. .+++-...+.|.++++.......... ........+++.|.+..++++-. ..+.|...++++.....
T Consensus 86 vd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 86 CDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 987444 44555567889999987543222211 12345688999987645555543 36889999988765444
Q ss_pred eeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 434 FSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 434 ~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
+.... -.....+++++++..|+.+. ..+.|..+|..................++++.. +.++.+-...+.|..++
T Consensus 160 ~~~~~--l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 160 IINSE--IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACN 235 (318)
T ss_dssp EECSS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEECC--CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEE
Confidence 43221 23467899999777776665 678899999864433323332344566777753 34444544566676655
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=0.00028 Score=67.73 Aligned_cols=255 Identities=11% Similarity=0.094 Sum_probs=143.5
Q ss_pred ceEEEEECC-CCCEEEEE-eCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEE-------cCCCCeEEEEeCCC
Q 010362 215 HAECARFSP-DGQFLVSC-SFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEF-------SRDSEMLASGSQDG 285 (512)
Q Consensus 215 ~v~~~~~s~-~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-------s~~~~~l~s~~~dg 285 (512)
....|+|+| ++..|..+ ...+.|++.|..++......... .........++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~-----~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN-----TIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT-----TSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC-----ccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 356899998 34444444 44467888998877655432210 012346899999 99999676666543
Q ss_pred -------eEEEEEccC-Ceee-----EEeccccccCeEEEEEecCCCE-EEEEeCCCcEEEEeCC-------CCce----
Q 010362 286 -------KIKVWRIRS-GQCL-----RRLERAHSEGVTSLVFSRDGSQ-ILSTSFDSTARIHGLK-------SGKL---- 340 (512)
Q Consensus 286 -------~i~vwd~~~-~~~~-----~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~v~i~d~~-------~~~~---- 340 (512)
.|.+++... +... ..+. .-.....++++|++.. +++-..++.|..+|+. ++..
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred CCcccCceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 255665333 2321 1222 1234567888995544 4455567789999987 4543
Q ss_pred -------eEE-ee-CCccceeEEEEcCCCCEEEEE-eCCCcEEEEeCC--CCcee--eecCCC---CCC------CCCCc
Q 010362 341 -------LKE-FR-GHSSYVNDAIFTNDGSRVVTA-SSDCTVKVWDLK--STDCL--QTFKPP---PPL------RGGDA 397 (512)
Q Consensus 341 -------~~~-~~-~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~--~~~~~--~~~~~~---~~~------~~~~~ 397 (512)
... +. +.......++|+|+|+.|+.+ +..+.|+.++.. .+... ..+... ... ...-.
T Consensus 293 ~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~ 372 (496)
T 3kya_A 293 VKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMN 372 (496)
T ss_dssp GGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCS
T ss_pred ccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccC
Confidence 112 22 223446789999999965444 556788886643 22210 111100 000 00111
Q ss_pred eeE-EEEEcC------CCCCeEEEEcCCCcEEEEecCCeEEEEeeCCc------------cc--------CCcEEEEEEC
Q 010362 398 SVN-SVHLFP------KNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK------------RE--------GGDFVAACVS 450 (512)
Q Consensus 398 ~i~-~~~~~~------~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~------------~~--------~~~~~~~~~s 450 (512)
... .+.... ....++++-..+.+|+.++..+......-.+. .. -.....++++
T Consensus 373 ~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd 452 (496)
T 3kya_A 373 NPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYD 452 (496)
T ss_dssp SEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEE
T ss_pred CCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEE
Confidence 233 444431 23366677777888999987664332222111 00 1235688888
Q ss_pred CC-CCEEEEEeCCCeEEEEEcCCCeeE
Q 010362 451 PK-GEWIYCVGEDRNLYCFSHQSGKLE 476 (512)
Q Consensus 451 ~~-g~~l~~g~~dg~i~iwd~~~~~~~ 476 (512)
++ |.+.++=..+..|+.+++......
T Consensus 453 ~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 453 DVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp TTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 86 666666667788888887765443
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=0.00023 Score=68.36 Aligned_cols=240 Identities=10% Similarity=0.062 Sum_probs=145.2
Q ss_pred ceeEEEEcC-CCCeEEEEeC-CCeEEEEEccCCeeeEEeccc--cccCeEEEEE-------ecCCCEEEEEeCCC-----
Q 010362 265 TVLCIEFSR-DSEMLASGSQ-DGKIKVWRIRSGQCLRRLERA--HSEGVTSLVF-------SRDGSQILSTSFDS----- 328 (512)
Q Consensus 265 ~v~~l~~s~-~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~--~~~~i~~~~~-------~~~~~~l~~~~~dg----- 328 (512)
....|+|.| ++..|..+.. .+.|++.|+.++......... .......++| ++++..++++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 3444555443 467889998877765444321 1235899999 99999777776554
Q ss_pred --cEEEEeCCC-Ccee-----EEeeCCccceeEEEEcCC-CCEEEEEeCCCcEEEEeCC-------CCce----------
Q 010362 329 --TARIHGLKS-GKLL-----KEFRGHSSYVNDAIFTND-GSRVVTASSDCTVKVWDLK-------STDC---------- 382 (512)
Q Consensus 329 --~v~i~d~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~-------~~~~---------- 382 (512)
.|.+++... +... ..+... .....++.+|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266776433 2221 222221 23567889994 5555566678889999987 4443
Q ss_pred -eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe--EE---EEeeCC--c---cc-------CCcE
Q 010362 383 -LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ--VV---KSFSSG--K---RE-------GGDF 444 (512)
Q Consensus 383 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~--~~---~~~~~~--~---~~-------~~~~ 444 (512)
...+.. .........++++|++..++++-.....|+.++.++. .+ ..+... . .. -...
T Consensus 299 ~~~~l~~----~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P 374 (496)
T 3kya_A 299 TFKQLFT----IADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNP 374 (496)
T ss_dssp TEEEEEE----CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSE
T ss_pred ccceeEe----cCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCC
Confidence 011100 0122345789999998546666677888999776532 11 111111 0 00 0123
Q ss_pred E-EEEEC-------CCCCEEEEEeCCCeEEEEEcCCCeeEEecccc------------------------CCCeEEEEEc
Q 010362 445 V-AACVS-------PKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVH------------------------EKDVIGVTHH 492 (512)
Q Consensus 445 ~-~~~~s-------~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h------------------------~~~v~~v~~~ 492 (512)
. .++.. ++|.+.++-..+..|+.++ .+|... ++.+. -.....|+++
T Consensus 375 ~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~-TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd 452 (496)
T 3kya_A 375 CQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVS-TYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYD 452 (496)
T ss_dssp EEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEE-EEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEE
T ss_pred eEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEE-EEecccccccccCccccccCCCCchhhhhcCCCcEEEEE
Confidence 3 45554 5677777777888999998 456433 33221 1236789999
Q ss_pred CC-CCeEEEEECCCeEEEec
Q 010362 493 PH-RNLLATYGEDCTMKLWK 511 (512)
Q Consensus 493 p~-~~~l~s~~~dg~i~iW~ 511 (512)
++ +.++++=....+|+.++
T Consensus 453 ~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 453 DVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp TTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEE
Confidence 96 77666666778888765
No 291
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.36 E-value=0.0017 Score=60.13 Aligned_cols=251 Identities=10% Similarity=0.111 Sum_probs=161.3
Q ss_pred CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEE
Q 010362 234 DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV 313 (512)
Q Consensus 234 dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 313 (512)
+..|.|-|+.++....+.+. .--+.-.+|..+.+|.-. ..++.|+|+++...++.+. ...+|.--.
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi-----------~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~--~~e~VvfWk 112 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI-----------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWK 112 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC-----------CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEE--CSSCCCEEE
T ss_pred CCeEEEEECCCCCcceeccc-----------ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhccee--cCCCceEEE
Confidence 44789999887654322111 122445678777777665 6799999999999888875 455677777
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCC-CceeEEeeCCc----cceeEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCc
Q 010362 314 FSRDGSQILSTSFDSTARIHGLKS-GKLLKEFRGHS----SYVNDAIFTNDGSRVVTASS-------DCTVKVWDLKSTD 381 (512)
Q Consensus 314 ~~~~~~~l~~~~~dg~v~i~d~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~ 381 (512)
|-.+ +.|+..+ +..|+-|++.. ..+.+.+..|. ..|..-..+++.++++..+- .|.+.+|..+.+.
T Consensus 113 Wis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~ 190 (494)
T 1bpo_A 113 WISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 190 (494)
T ss_dssp EEET-TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC
T ss_pred ecCC-CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc
Confidence 7644 4566555 56899999964 35666676653 35667777889998875442 4678889877543
Q ss_pred eeeecCCCCCCCCCCceeEEEEEcCC--CCCeEEEEcC---CCcEEEEecCCe----------EEEEeeCCcccCCcEEE
Q 010362 382 CLQTFKPPPPLRGGDASVNSVHLFPK--NPDHIVVCNK---TSSIYIMTLQGQ----------VVKSFSSGKREGGDFVA 446 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~---~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~ 446 (512)
. +.+. +|......+..... ...++..+.. .+.+++.++... ....+...........+
T Consensus 191 s-Q~ie------Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPva 263 (494)
T 1bpo_A 191 S-QPIE------GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 263 (494)
T ss_dssp E-EEEC------CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEE
T ss_pred c-chhe------eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeE
Confidence 2 2222 34444433333211 1123333333 378888887421 12222223333455678
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeE
Q 010362 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 507 (512)
Q Consensus 447 ~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i 507 (512)
+.+|+.-..++.-+.-|.|++||+.++.++..-+-...+|..-+-+....=++.....|.|
T Consensus 264 mqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred EEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence 8999999999999999999999999999987766566666655555544444455566655
No 292
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.31 E-value=0.0016 Score=57.90 Aligned_cols=251 Identities=10% Similarity=0.108 Sum_probs=159.4
Q ss_pred CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEE
Q 010362 234 DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV 313 (512)
Q Consensus 234 dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 313 (512)
+..|.|.|+..+....+.+. .--+.-.+|..+.+|.-. ..++.++|+++.+.++... ....|.--.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi-----------~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~--~~e~VvfWk 113 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPI-----------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWK 113 (365)
T ss_dssp EEEEEEEETTSTTSCEEEEC-----------CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE--CSSCEEEEE
T ss_pred CCEEEEEECCCCCCcccccc-----------ccceeeeCCCccEEEEec-CCeEEEechHHhhhhccee--cCCccEEEE
Confidence 34788999887654322111 122344578888777765 6799999999999888876 456788888
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCC-CceeEEeeCCc----cceeEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCc
Q 010362 314 FSRDGSQILSTSFDSTARIHGLKS-GKLLKEFRGHS----SYVNDAIFTNDGSRVVTASS-------DCTVKVWDLKSTD 381 (512)
Q Consensus 314 ~~~~~~~l~~~~~dg~v~i~d~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~ 381 (512)
|-.+ +.|+..+ +..|+-|++.. ..+.+.+..|. ..|..-..+++.++++..+- .|.+.+|..+.+.
T Consensus 114 Wis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~ 191 (365)
T 2xzh_A 114 WISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 191 (365)
T ss_dssp ECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE
T ss_pred ecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc
Confidence 8744 4566665 56899999964 35666666653 35667777889998765542 3678888877543
Q ss_pred eeeecCCCCCCCCCCceeEEEEEcCC--CCCeEEEEcC---CCcEEEEecCCe----------EEEEeeCCcccCCcEEE
Q 010362 382 CLQTFKPPPPLRGGDASVNSVHLFPK--NPDHIVVCNK---TSSIYIMTLQGQ----------VVKSFSSGKREGGDFVA 446 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~---~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~ 446 (512)
.+.+. +|......+..... ...+++.+.. .+.+++.++... ....+...........+
T Consensus 192 -sQ~ie------Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVa 264 (365)
T 2xzh_A 192 -SQPIE------GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 264 (365)
T ss_dssp -EEEEC------CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEE
T ss_pred -cceee------eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEE
Confidence 22222 33333322222211 1123333332 257888887421 22223333334555678
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeE
Q 010362 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTM 507 (512)
Q Consensus 447 ~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i 507 (512)
+.+|+.-..++.-+.-|.|++||+.+|.++..-+-...+|-.-+-+....=++.....|.|
T Consensus 265 mqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 265 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 8899999999999999999999999999987766556666655554433334444566654
No 293
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=98.29 E-value=3e-07 Score=63.02 Aligned_cols=53 Identities=9% Similarity=0.394 Sum_probs=45.5
Q ss_pred hhhHHHHHHHHHHhcChHHHHHHHHhhcCccccccccHHHHHhhhccCCchhhhh
Q 010362 7 ARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILP 61 (512)
Q Consensus 7 ~~e~~~li~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~~~~~i~~g~w~~~~~ 61 (512)
++|+++.|++||..+||.+++.+|.+|.+++.+. +... -..-+++.+|.+|++
T Consensus 10 ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~-~~~~-ky~gLLEKKWTSViR 62 (88)
T 1uuj_A 10 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNE-ELDK-KYAGLLEKKWTSVIR 62 (88)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCH-HHHH-HHTTHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCc-hhhh-hhhhhhhhhHHHHHH
Confidence 6799999999999999999999999999998763 3233 355699999999998
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.29 E-value=0.00035 Score=62.74 Aligned_cols=161 Identities=10% Similarity=0.160 Sum_probs=109.6
Q ss_pred eEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeecccccccccee-eccCcceeEEEE---cCCCCeEEEEe--------
Q 010362 216 AECARFSPDGQFLVSCS-FDGFIEVWDYLSGKLKKDLQYQADETF-MMHDETVLCIEF---SRDSEMLASGS-------- 282 (512)
Q Consensus 216 v~~~~~s~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~---s~~~~~l~s~~-------- 282 (512)
-.+++|++....|..++ ..|+|..||...+..... ..... .. ......+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~-s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGA-SSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTT-CCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCc-cccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 34688988666666666 799999999875543222 11100 00 001224689999 68887777544
Q ss_pred -----CCCeEEEEEcc---CCeeeEEeccc------------cccCeEEEEEecCCCEEEEEeCC-CcEEEEeCCCCcee
Q 010362 283 -----QDGKIKVWRIR---SGQCLRRLERA------------HSEGVTSLVFSRDGSQILSTSFD-STARIHGLKSGKLL 341 (512)
Q Consensus 283 -----~dg~i~vwd~~---~~~~~~~~~~~------------~~~~i~~~~~~~~~~~l~~~~~d-g~v~i~d~~~~~~~ 341 (512)
.+..|..+|+. +++.+...... ....+..++..++|+..++++.. +.|...+... +.+
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~ 171 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG-KTV 171 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-CCE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEE
Confidence 26789999999 78766554311 11348899999999999999888 8888888753 333
Q ss_pred EEee-C-----CccceeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010362 342 KEFR-G-----HSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKS 379 (512)
Q Consensus 342 ~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 379 (512)
..+. . .....+.|+++|+|+.|++....|.+..+|+.+
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 3221 1 122367999999999999987799999999884
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.29 E-value=0.00081 Score=62.47 Aligned_cols=235 Identities=13% Similarity=0.157 Sum_probs=122.1
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC---CCeEEEEeC-C-----
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD---SEMLASGSQ-D----- 284 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~~l~s~~~-d----- 284 (512)
...+.++|.|+|+++++ ..+|.|.+++ +++........ .+.........|+|+|+ +..|..+.. .
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~---v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELS---VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecce---EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 35679999999995554 5679999998 44321111100 11123456889999998 555555443 2
Q ss_pred CeEEEEEccCCe-----ee-EEec--cccccCeEEEEEecCCCEEEEEeC-------------CCcEEEEeCCCC-----
Q 010362 285 GKIKVWRIRSGQ-----CL-RRLE--RAHSEGVTSLVFSRDGSQILSTSF-------------DSTARIHGLKSG----- 338 (512)
Q Consensus 285 g~i~vwd~~~~~-----~~-~~~~--~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~v~i~d~~~~----- 338 (512)
+.|..++...+. .+ ..+. .........++|.|||.+.++.+. .|.|.-++....
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 578888876542 11 1122 111123468999999976555432 246666665420
Q ss_pred --------ceeEEeeCCccceeEEEEcC-CCCEEEEEeCCCcE------EEEeCCCCceee-----------ecCCCCCC
Q 010362 339 --------KLLKEFRGHSSYVNDAIFTN-DGSRVVTASSDCTV------KVWDLKSTDCLQ-----------TFKPPPPL 392 (512)
Q Consensus 339 --------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i------~iwd~~~~~~~~-----------~~~~~~~~ 392 (512)
.....-.++.. ...++|+| ++..+++-...+.+ .+.-+..+.... .+..+...
T Consensus 185 pf~~~~~~~~~i~a~G~rn-p~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHRN-PQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp TTTTCTTSCTTEEEECCSE-ECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred cccCCCCCCccEEEEcCCC-cccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence 11111123333 67789999 66655543322221 122222222000 00000000
Q ss_pred CCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeE-------EEEeeCCcccCCcEEEEEECCCCCEEEEEe
Q 010362 393 RGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQV-------VKSFSSGKREGGDFVAACVSPKGEWIYCVG 460 (512)
Q Consensus 393 ~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 460 (512)
.........+++. .+ .++++....+.|...++.+.. ...+.. ....+..+++.|||.+.++..
T Consensus 264 ~~~~~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~---~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 264 WPQGFPPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWRVLRVETALS---GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CTTCCCEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE---SSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCCCCcceEEE-CC-EEEEEECCCCEEEEEEECCCCcceeecchheecc---cCCCeeEEEECCCCcEEEEEe
Confidence 0112244566663 23 566666667778877776321 122221 234678999999997666654
No 296
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.26 E-value=0.00013 Score=65.50 Aligned_cols=168 Identities=10% Similarity=0.130 Sum_probs=114.7
Q ss_pred cccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeEE-eeC----C--ccceeEEEE---cCCCCEEEEEe------
Q 010362 305 HSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLKE-FRG----H--SSYVNDAIF---TNDGSRVVTAS------ 367 (512)
Q Consensus 305 ~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~------ 367 (512)
......++.|++....+..++ ..++|..||...+..... +.+ . ...+..+.| .|++.++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 344566889998766777776 689999999875544333 221 1 113578999 68877766544
Q ss_pred -------CCCcEEEEeCC---CCceeeecCCCCCCCC-------CCceeEEEEEcCCCCCeEEEEcCC-CcEEEEecCCe
Q 010362 368 -------SDCTVKVWDLK---STDCLQTFKPPPPLRG-------GDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQ 429 (512)
Q Consensus 368 -------~dg~i~iwd~~---~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~l~~~~~~-~~i~~~~~~~~ 429 (512)
.+..+..||+. +++............+ .......++..+++ +..++++.. +.|...+.++.
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCCCeEEEEeCCCC
Confidence 26779999999 7766554432111001 22458899999987 777778878 89999998877
Q ss_pred EEEEeeCCc---ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Q 010362 430 VVKSFSSGK---REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG 473 (512)
Q Consensus 430 ~~~~~~~~~---~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~ 473 (512)
....+.... ......+.++++|+|+.|++....|.+..+|+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 555443221 11223568999999999988877999999998843
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.24 E-value=0.0025 Score=59.08 Aligned_cols=145 Identities=14% Similarity=0.100 Sum_probs=81.3
Q ss_pred cCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCe-eeccccccccceeeccCcceeEEEEcCC---CCeEEEEeC----C
Q 010362 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGK-LKKDLQYQADETFMMHDETVLCIEFSRD---SEMLASGSQ----D 284 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~~l~s~~~----d 284 (512)
-...+.++|.|+|++++ +..+|.|.+++ .+++ ....+. .+.........|+++|+ +..|..+.. +
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~-----v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~ 100 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFD-----VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG 100 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECC-----CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccc-----eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence 34578999999998555 55579999997 3444 111111 11112356889999997 455554433 3
Q ss_pred ----CeEEEEEccCC--e-----ee-EEeccccccCeEEEEEecCCCEEEEEeC-------------CCcEEEEeCCCC-
Q 010362 285 ----GKIKVWRIRSG--Q-----CL-RRLERAHSEGVTSLVFSRDGSQILSTSF-------------DSTARIHGLKSG- 338 (512)
Q Consensus 285 ----g~i~vwd~~~~--~-----~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~v~i~d~~~~- 338 (512)
+.|..|+...+ . .+ ..+..........++|.|||.+.++.+. .|.|.-++....
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~ 180 (354)
T 3a9g_A 101 GHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP 180 (354)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC
T ss_pred CCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC
Confidence 56777877654 1 11 1122111223567999999986665432 245666665321
Q ss_pred -------ceeEEeeCCccceeEEEEcC-CCCEEEE
Q 010362 339 -------KLLKEFRGHSSYVNDAIFTN-DGSRVVT 365 (512)
Q Consensus 339 -------~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 365 (512)
.....-.++.. ...++|+| ++..+++
T Consensus 181 p~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 181 PADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVAT 214 (354)
T ss_dssp CTTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEE
T ss_pred CCCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEE
Confidence 01111123433 56789999 5654444
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.23 E-value=0.0039 Score=62.60 Aligned_cols=232 Identities=6% Similarity=-0.070 Sum_probs=144.5
Q ss_pred EEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEE-eCCCeEEEEEccCCeeeEEecccc
Q 010362 227 FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASG-SQDGKIKVWRIRSGQCLRRLERAH 305 (512)
Q Consensus 227 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~ 305 (512)
+|+.+ ..+.|+..++++......+.. ..-..+..++|++.+..|..+ ..++.|..+++........+. ..
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~-------~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~-~g 78 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPL-------TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE-FG 78 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCC-------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEc-------CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe-CC
Confidence 44443 467888888876543222211 123467899999976665555 457889999987544333332 22
Q ss_pred ccCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCce
Q 010362 306 SEGVTSLVFSRDGSQILST-SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS--DCTVKVWDLKSTDC 382 (512)
Q Consensus 306 ~~~i~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~ 382 (512)
......+++.+.+..|+.+ ...+.|.+.++........+...-.....+++.|....|+.+.. .+.|...++.....
T Consensus 79 ~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 79 LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 3457789998766656554 44678999998654332223233445789999996556655542 56788888765433
Q ss_pred eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC
Q 010362 383 LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED 462 (512)
Q Consensus 383 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d 462 (512)
..... .-.....+++.+.+..++++-...+.|...++++.....+... ......+++.. +...++-...
T Consensus 159 ~~l~~-------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~---l~~P~glav~~-~~ly~tD~~~ 227 (628)
T 4a0p_A 159 TTLVP-------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADD---LPHPFGLTQYQ-DYIYWTDWSR 227 (628)
T ss_dssp EEEEC-------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC---CSCEEEEEEET-TEEEEEETTT
T ss_pred EEEEC-------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeecc---CCCceEEEEEC-CEEEEecCCC
Confidence 22221 2346788999998867777778888999999986543333222 22345677654 3444444468
Q ss_pred CeEEEEEcCCCeeEEe
Q 010362 463 RNLYCFSHQSGKLEHL 478 (512)
Q Consensus 463 g~i~iwd~~~~~~~~~ 478 (512)
+.|...|..+|+....
T Consensus 228 ~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 228 RSIERANKTSGQNRTI 243 (628)
T ss_dssp TEEEEEETTTCCSCEE
T ss_pred CEEEEEECCCCCceEE
Confidence 8999999877754433
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.22 E-value=0.00096 Score=60.51 Aligned_cols=193 Identities=13% Similarity=0.271 Sum_probs=124.5
Q ss_pred CCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecC----CC---EEEEEeC---CCcEEEEeC--CCCcee
Q 010362 274 DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD----GS---QILSTSF---DSTARIHGL--KSGKLL 341 (512)
Q Consensus 274 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~~~---dg~v~i~d~--~~~~~~ 341 (512)
...+++.....+-+.+||+ +|+.+..+. .+.++.+..-|+ |+ ++++... +++|.+|++ .++ .+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TL 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ce
Confidence 3456666677889999999 888888875 256777776663 22 2333333 478999976 333 34
Q ss_pred EEeeC------Cc-cceeEEEE--cCC-CC-EEEEEeCCCcEEEEeCC-------CCceeeecCCCCCCCCCCceeEEEE
Q 010362 342 KEFRG------HS-SYVNDAIF--TND-GS-RVVTASSDCTVKVWDLK-------STDCLQTFKPPPPLRGGDASVNSVH 403 (512)
Q Consensus 342 ~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~i~~~~ 403 (512)
..+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.++++... ..+..+.
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-------sq~Egcv 186 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-------SQTEGMA 186 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-------SCEEEEE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-------CCcceEE
Confidence 44421 11 45666777 674 43 68888889999999883 23445555532 3567777
Q ss_pred EcCCCCCeEEEEcCCCcEEEEecC------CeEEEEeeCCcccCCcEEEEEE--CCCCC-EEEEEe-CCCeEEEEEcC-C
Q 010362 404 LFPKNPDHIVVCNKTSSIYIMTLQ------GQVVKSFSSGKREGGDFVAACV--SPKGE-WIYCVG-EDRNLYCFSHQ-S 472 (512)
Q Consensus 404 ~~~~~~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--s~~g~-~l~~g~-~dg~i~iwd~~-~ 472 (512)
..+.. ..++++..+..|+.++.+ ...+..+.. ..-...+..+++ .++|+ ||++++ .++...+||.. +
T Consensus 187 vDd~~-g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~-g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 187 ADDEY-GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG-RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EETTT-TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSS-SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EcCCC-CeEEEecccceEEEEeCCcCCCCCceEEEEecC-CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 77766 788888888778777755 123333322 222335777777 56666 677666 67799999997 6
Q ss_pred CeeEEecc
Q 010362 473 GKLEHLMK 480 (512)
Q Consensus 473 ~~~~~~~~ 480 (512)
.+.+..+.
T Consensus 265 ~~~vg~f~ 272 (355)
T 3amr_A 265 NKYVADFR 272 (355)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEE
Confidence 66666663
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.20 E-value=0.0063 Score=60.99 Aligned_cols=288 Identities=12% Similarity=0.026 Sum_probs=153.3
Q ss_pred CceEEEEECCCCCEE-EEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC--CCeEEEE
Q 010362 214 SHAECARFSPDGQFL-VSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ--DGKIKVW 290 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~--dg~i~vw 290 (512)
.....+++.+.+..| ++-...+.|.+.+.+..... .+. ...-.....|++.|.+..|..+.. .+.|...
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~-~l~-------~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~ 155 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLF-------WQELDQPRAIALDPSSGFMYWTDWGEVPKIERA 155 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE-------CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE-EEE-------eCCCCCCceEEEecCCCeEEEeccCCCCEEEEE
Confidence 467889999965544 45556789999998654321 111 013345778999997666665553 3567766
Q ss_pred EccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCC
Q 010362 291 RIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSD 369 (512)
Q Consensus 291 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 369 (512)
+++ |.....+....-.....+++++++..|+.+. ..+.|..+|+..........+.......+++..+ ..+++-...
T Consensus 156 ~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~ 233 (619)
T 3s94_A 156 GMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWST 233 (619)
T ss_dssp ETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTT
T ss_pred ECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCC
Confidence 765 3333333223345688999999777776664 4578999998644332222222223456777655 444444457
Q ss_pred CcEEEEeCCCCceeeecCCCC-------------------CCCCCCceeEEEEE-----------cCCC-----------
Q 010362 370 CTVKVWDLKSTDCLQTFKPPP-------------------PLRGGDASVNSVHL-----------FPKN----------- 408 (512)
Q Consensus 370 g~i~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~i~~~~~-----------~~~~----------- 408 (512)
+.|...|..+++....+.... +.....+....+++ +|.+
T Consensus 234 ~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~ 313 (619)
T 3s94_A 234 HSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK 313 (619)
T ss_dssp CSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBC
T ss_pred CEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccC
Confidence 789999987765433322110 00000001111111 1111
Q ss_pred --CCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccccCCC
Q 010362 409 --PDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKD 485 (512)
Q Consensus 409 --~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h~~~ 485 (512)
+..++.....+.|+..++..............-..+..+++.+.+..|+... ..+.|+.++.........+...-..
T Consensus 314 ~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~ 393 (619)
T 3s94_A 314 DGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAH 393 (619)
T ss_dssp SSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred CCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCC
Confidence 1112222233455555554221111111111123467889988666666554 6788999998764443333333356
Q ss_pred eEEEEEcCC-CCeEEEEECCCeEEEec
Q 010362 486 VIGVTHHPH-RNLLATYGEDCTMKLWK 511 (512)
Q Consensus 486 v~~v~~~p~-~~~l~s~~~dg~i~iW~ 511 (512)
+.++++.+. ++++++-+..+.|.+-+
T Consensus 394 p~GlAvD~~~~~lY~tD~~~~~I~v~~ 420 (619)
T 3s94_A 394 PDGIAVDWVARNLYWTDTGTDRIEVTR 420 (619)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCceEEecccCcEEEEeCCCCcEEEEe
Confidence 778888874 44555544556666543
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.18 E-value=0.0015 Score=65.58 Aligned_cols=228 Identities=10% Similarity=0.013 Sum_probs=133.9
Q ss_pred CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC-CCeEEEEEccCCeeeEEeccccccCeEEE
Q 010362 234 DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ-DGKIKVWRIRSGQCLRRLERAHSEGVTSL 312 (512)
Q Consensus 234 dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~i~~~ 312 (512)
...|+..++........+. ...-..+..++|++.+..|..+.. .+.|..+++........+....-.....+
T Consensus 17 ~~~I~~i~~~~~~~~~~~~-------~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl 89 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIV-------VGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 89 (619)
T ss_dssp SSBEEEECCC----------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE
T ss_pred cccEEEEeCCCCcceEEEE-------EcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE
Confidence 5678888876542111111 113355789999997766666554 67888888875532222221223578899
Q ss_pred EEecCCCEEEEE-eCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCceeeecCCC
Q 010362 313 VFSRDGSQILST-SFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS--DCTVKVWDLKSTDCLQTFKPP 389 (512)
Q Consensus 313 ~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~ 389 (512)
++.+.+..|+.+ ...+.|.+.++........+...-.....+++.|.+..|+.+.. .+.|...++...........
T Consensus 90 AvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~- 168 (619)
T 3s94_A 90 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS- 168 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS-
T ss_pred EEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC-
Confidence 999866655555 45688999998654333333234455788999997666655553 45677777654322222111
Q ss_pred CCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEE
Q 010362 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCF 468 (512)
Q Consensus 390 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iw 468 (512)
.-...+.+++.+.+..++++-...+.|...++++.....+.... ......+++..+ .|+... .++.|...
T Consensus 169 -----~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~--~~~P~gi~~~~~--~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 169 -----EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--LPHPFALTLFED--ILYWTDWSTHSILAC 239 (619)
T ss_dssp -----SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTCSEEEE
T ss_pred -----CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC--CCCceEEEEeCC--EEEEecCCCCEEEEE
Confidence 12357889999988677777778889999999976555443311 112235666555 455444 67889999
Q ss_pred EcCCCeeEEe
Q 010362 469 SHQSGKLEHL 478 (512)
Q Consensus 469 d~~~~~~~~~ 478 (512)
|..+++....
T Consensus 240 d~~tg~~~~~ 249 (619)
T 3s94_A 240 NKYTGEGLRE 249 (619)
T ss_dssp ESSSCCCCEE
T ss_pred ECCCCcccEE
Confidence 9887764443
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.16 E-value=0.00092 Score=60.63 Aligned_cols=187 Identities=19% Similarity=0.325 Sum_probs=120.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCC----CC---EEEEEeC---CCcEEEEeCC--CCceee
Q 010362 317 DGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTND----GS---RVVTASS---DCTVKVWDLK--STDCLQ 384 (512)
Q Consensus 317 ~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~i~iwd~~--~~~~~~ 384 (512)
..+.++.....+-+.+||+ +|+.+..+.. +.++.+..-|+ |+ ++++... +++|.+|++. ++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 4456776777889999999 8999888864 45677776663 22 2333333 4789999763 333 44
Q ss_pred ecCCCC-CCCCCCceeEEEEE--cCCCCC-eEEEEcCCCcEEEEecC--------CeEEEEeeCCcccCCcEEEEEECCC
Q 010362 385 TFKPPP-PLRGGDASVNSVHL--FPKNPD-HIVVCNKTSSIYIMTLQ--------GQVVKSFSSGKREGGDFVAACVSPK 452 (512)
Q Consensus 385 ~~~~~~-~~~~~~~~i~~~~~--~~~~~~-~l~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~s~~ 452 (512)
.+.... +.......++.+++ +|.... ++++...++.+..|++. .+.++.+.. .+.+..+...+.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l----gsq~EgcvvDd~ 190 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM----NSQTEGMAADDE 190 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC----SSCEEEEEEETT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC----CCCcceEEEcCC
Confidence 432210 00011255667777 665433 68888889999998883 233444444 346778889999
Q ss_pred CCEEEEEeCCCeEEEEEcC-----CCeeEEecc-cc-CCCeEEEEE--cCCCC-eEEEEE-CCCeEEEec
Q 010362 453 GEWIYCVGEDRNLYCFSHQ-----SGKLEHLMK-VH-EKDVIGVTH--HPHRN-LLATYG-EDCTMKLWK 511 (512)
Q Consensus 453 g~~l~~g~~dg~i~iwd~~-----~~~~~~~~~-~h-~~~v~~v~~--~p~~~-~l~s~~-~dg~i~iW~ 511 (512)
...|+.+-++.-|..++.. +++++..+. ++ ...+..|+. .++++ +|++++ .+.+..+||
T Consensus 191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 9999999999888778855 345665543 22 246888887 44555 555555 677888886
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.16 E-value=0.003 Score=57.96 Aligned_cols=238 Identities=11% Similarity=0.053 Sum_probs=127.0
Q ss_pred cCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEc
Q 010362 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI 292 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~ 292 (512)
...+.++.|++ +..++ ++.+|.|.. ..+.|+.-...... ..+...+..+.+.+++..++++ .+|.|.. ..
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~ 148 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLD-----PKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TK 148 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCC-----TTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ES
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccc-----cCCCCCeEEEEEECCCCEEEEe-CCccEEE-Ec
Confidence 34678899986 44444 455675544 33334322211110 0123456778887777666655 4564422 22
Q ss_pred cCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEE-EeCCCCceeEEe-eCCccceeEEEEcCCCCEEEEEeCCC
Q 010362 293 RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARI-HGLKSGKLLKEF-RGHSSYVNDAIFTNDGSRVVTASSDC 370 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i-~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg 370 (512)
+.|+.-..........+..+.+.|++.+++++. +|.++. .|- .++.-..+ ......+..+.+.+++..+ .++.+|
T Consensus 149 DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G 225 (327)
T 2xbg_A 149 DSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGG 225 (327)
T ss_dssp STTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTT
T ss_pred CCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEE-EEeCCc
Confidence 335444444334566789999999887776664 555544 332 12222222 2344568889999988755 555678
Q ss_pred cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC-CeEEEEeeCCcccCCcEEEEEE
Q 010362 371 TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ-GQVVKSFSSGKREGGDFVAACV 449 (512)
Q Consensus 371 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 449 (512)
.+++.+...++.-..+..+. + .....+.++.+.+.+ .++++ +.++.++ +..+ +...............+..+.+
T Consensus 226 ~~~~s~~D~G~tW~~~~~~~-~-~~~~~~~~v~~~~~~-~~~~~-g~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~ 300 (327)
T 2xbg_A 226 KIAFSDPDNSENWGELLSPL-R-RNSVGFLDLAYRTPN-EVWLA-GGAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILF 300 (327)
T ss_dssp EEEEEETTEEEEECCCBCTT-S-SCCSCEEEEEESSSS-CEEEE-ESTTCEE-EESSTTSSCEECGGGTTSSSCCCEEEE
T ss_pred eEEEecCCCCCeeEeccCCc-c-cCCcceEEEEecCCC-EEEEE-eCCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEE
Confidence 87776433233222222110 0 112357888887753 44444 4567664 3344 4444433322111234667777
Q ss_pred CCCCCEEEEEeCCCeEEEEE
Q 010362 450 SPKGEWIYCVGEDRNLYCFS 469 (512)
Q Consensus 450 s~~g~~l~~g~~dg~i~iwd 469 (512)
.+++. +++++.+|.|.-++
T Consensus 301 ~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 301 FSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EETTE-EEEECSTTEEEEEC
T ss_pred ECCCc-eEEEcCCceEEEEc
Confidence 65544 66777788877665
No 304
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.12 E-value=0.0033 Score=64.69 Aligned_cols=221 Identities=11% Similarity=-0.011 Sum_probs=134.0
Q ss_pred eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCC----ceeEEeeCCccce
Q 010362 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST-SFDSTARIHGLKSG----KLLKEFRGHSSYV 351 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~----~~~~~~~~~~~~v 351 (512)
+|+.+. ...|+..++......... .....+..++|.+....|+.+ ...+.|+.+++... .....+.......
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~--~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccccc-ccceeEeeccCCcceeee--cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 344433 456888888766544433 245668899999865555555 44577888888642 2233333334557
Q ss_pred eEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-CcEEEEecCCe
Q 010362 352 NDAIFTNDGSRV-VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQ 429 (512)
Q Consensus 352 ~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-~~i~~~~~~~~ 429 (512)
..|++.+.+..| ++-...+.|.+.++........+. ........|++.|....++++-... +.|...+++|.
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 789999876555 455567889999987554322221 1223578999999875555555444 78999999987
Q ss_pred EEEEeeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEecccc--CCCeEEEEEcCCCCeEEEEECCCe
Q 010362 430 VVKSFSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVH--EKDVIGVTHHPHRNLLATYGEDCT 506 (512)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h--~~~v~~v~~~p~~~~l~s~~~dg~ 506 (512)
....+.... -.....+++++.+..|+.+. ..+.|..+++........+... -....+|++..+ .++++-...+.
T Consensus 548 ~~~~lv~~~--l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~ 624 (791)
T 3m0c_C 548 DIYSLVTEN--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA 624 (791)
T ss_dssp CEEEEECSS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTE
T ss_pred ceEEEEeCC--CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCE
Confidence 666554422 24578899998777777665 5678999998654443333321 223446666332 33334334455
Q ss_pred EEE
Q 010362 507 MKL 509 (512)
Q Consensus 507 i~i 509 (512)
|..
T Consensus 625 I~~ 627 (791)
T 3m0c_C 625 IFS 627 (791)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.12 E-value=0.0038 Score=62.67 Aligned_cols=223 Identities=10% Similarity=-0.002 Sum_probs=140.8
Q ss_pred eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceeEEeeCCccceeEEE
Q 010362 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKSGKLLKEFRGHSSYVNDAI 355 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~ 355 (512)
+|+.+ ....|+..++.+......+....-..+..++|++.+..|+.+. .++.|+.+++........+......+..++
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 44444 4568999999876543333322345688999999766666554 568899999865544333333334577899
Q ss_pred EcCCCCEE-EEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc-CCCcEEEEecCCeEEEE
Q 010362 356 FTNDGSRV-VTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN-KTSSIYIMTLQGQVVKS 433 (512)
Q Consensus 356 ~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~~~~i~~~~~~~~~~~~ 433 (512)
+.+.+..| ++-...+.|.+.++........+. ..-.....+++.|....++++-. ..+.|...++++.....
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~ 160 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT 160 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCEEEEC------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE
Confidence 98765555 554557789999987543222211 12235689999997745555542 36788888888765554
Q ss_pred eeCCcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 434 FSSGKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 434 ~~~~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
+.. .......+++++++..|+.+. ..+.|..+|+..... ..+........++++.. +.++++-...+.|...|
T Consensus 161 l~~---~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 161 LVP---NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEC---CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 443 234578999999877777665 667899999865443 33333334456777764 34444444466666544
No 306
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.10 E-value=0.0062 Score=56.44 Aligned_cols=249 Identities=11% Similarity=0.091 Sum_probs=125.4
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC---CCeEEEEe-C------
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD---SEMLASGS-Q------ 283 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~~l~s~~-~------ 283 (512)
...+.++|.|+|+.|+++...|.|++++.. +.....+...+ ..+.........|+++|+ +..|..+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~-~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVP-DVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCC-CCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCc-ccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 356899999999934445568999999853 33221111000 111123456789999996 44444442 2
Q ss_pred -CCeEEEEEccCC--e--eeEEe----cc--ccccCeEEEEEecCCCEEEEEeC-------------CCcEEEEeCCCCc
Q 010362 284 -DGKIKVWRIRSG--Q--CLRRL----ER--AHSEGVTSLVFSRDGSQILSTSF-------------DSTARIHGLKSGK 339 (512)
Q Consensus 284 -dg~i~vwd~~~~--~--~~~~~----~~--~~~~~i~~~~~~~~~~~l~~~~~-------------dg~v~i~d~~~~~ 339 (512)
...|..|++..+ . ....+ .. ........++|.|||.+.++.+. .|.|.-++....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666533 1 11111 10 01122467999999965555433 2457777764320
Q ss_pred ------------eeEEe-eCCccceeEEEEcCCCCEEEEEeCC--CcEEEEeCCCCceee--------------------
Q 010362 340 ------------LLKEF-RGHSSYVNDAIFTNDGSRVVTASSD--CTVKVWDLKSTDCLQ-------------------- 384 (512)
Q Consensus 340 ------------~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~-------------------- 384 (512)
....+ .++.. ...++|+|....|.++... +.=.|.-+..+....
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rn-p~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRN-PQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSE-EEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcCcC-ccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 11111 23433 6789999943345444332 112222222221100
Q ss_pred ----ecCCCCCCCCCCceeEEEEEcCC------CCCeEEEEcCCCcEEEEecCCe-EEEEeeCCcccCCcEEEEEECCCC
Q 010362 385 ----TFKPPPPLRGGDASVNSVHLFPK------NPDHIVVCNKTSSIYIMTLQGQ-VVKSFSSGKREGGDFVAACVSPKG 453 (512)
Q Consensus 385 ----~~~~~~~~~~~~~~i~~~~~~~~------~~~~l~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g 453 (512)
.+..+.....+......+.+... ...++++....+.|...++.+. ..............+..+++.|||
T Consensus 255 ~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 334 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG 334 (353)
T ss_dssp SSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS
T ss_pred CCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC
Confidence 00000000011234666777642 2356666667788888887643 222211111123468899999999
Q ss_pred CEEEEEe-CCCeE
Q 010362 454 EWIYCVG-EDRNL 465 (512)
Q Consensus 454 ~~l~~g~-~dg~i 465 (512)
.+.++.. .+|.|
T Consensus 335 ~lyv~td~~~g~I 347 (353)
T 2g8s_A 335 YLYVLTDESSGEL 347 (353)
T ss_dssp CEEEEECSTTEEE
T ss_pred cEEEEEeCCCCEE
Confidence 8655433 34544
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.09 E-value=0.0015 Score=59.16 Aligned_cols=234 Identities=12% Similarity=0.070 Sum_probs=119.8
Q ss_pred CCCEEEEEe-CC-----CeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC-----CeEEEEEc
Q 010362 224 DGQFLVSCS-FD-----GFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD-----GKIKVWRI 292 (512)
Q Consensus 224 ~~~~l~sg~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~vwd~ 292 (512)
++.+++.|+ .+ ..+.+||..+++-........ .......+. .++.+++.|+.+ ..+.+||+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~ 85 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR------KRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDY 85 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSS------CCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEET
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCCh------hhccccEEE--ECCEEEEEcCCCCCccCceEEEEEC
Confidence 445666666 33 368899988776433211111 111111222 256777777755 46899998
Q ss_pred cCCe---eeEEeccccccCeEEEEEecCCCEEEEEeCC-----CcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEE
Q 010362 293 RSGQ---CLRRLERAHSEGVTSLVFSRDGSQILSTSFD-----STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVV 364 (512)
Q Consensus 293 ~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 364 (512)
.+++ -...-.......-.+++. .++..++.|+.+ ..+.+||+.+.+-...-..........+..-+++.++
T Consensus 86 ~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 164 (301)
T 2vpj_A 86 TADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYC 164 (301)
T ss_dssp TCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEE
T ss_pred CCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEE
Confidence 8766 322211111111112222 256777777654 3588999877653322111111111111222566777
Q ss_pred EEeCC-----CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-----CcEEEEecCCeEEEEe
Q 010362 365 TASSD-----CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-----SSIYIMTLQGQVVKSF 434 (512)
Q Consensus 365 ~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~ 434 (512)
.|+.+ ..+.+||+.+.+-...-..+... .....+.+ +..+++.|+.+ ..+.+||.........
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 237 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR----SGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV 237 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC----BSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred ECCCCCCcccceEEEEeCCCCcEEeCCCCCccc----ccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCcEEEC
Confidence 77654 45889998876543331111111 11112222 33666776653 5689999986665555
Q ss_pred eCCcccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCee
Q 010362 435 SSGKREGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQSGKL 475 (512)
Q Consensus 435 ~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~~~~ 475 (512)
............+. .+++.++.|+.+ ..+.+||..+.+-
T Consensus 238 ~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 238 TSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp CCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 43332222222222 267777777755 4688899887653
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.05 E-value=0.0062 Score=56.46 Aligned_cols=229 Identities=14% Similarity=0.123 Sum_probs=121.6
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCee--eEEec--cccccCeEEEEEecC---CCEEEEEeC-C-----CcE
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQC--LRRLE--RAHSEGVTSLVFSRD---GSQILSTSF-D-----STA 330 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~--~~~~~~i~~~~~~~~---~~~l~~~~~-d-----g~v 330 (512)
.....++|.|+|++++ +..+|.|++++ +++. +..+. .........++++|+ +..|+++.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3567999999998555 56679999998 4442 11111 112456899999998 555655543 2 678
Q ss_pred EEEeCCCCc-----ee-EEee---CCccceeEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCCceeeecCC
Q 010362 331 RIHGLKSGK-----LL-KEFR---GHSSYVNDAIFTNDGSRVVTASS-------------DCTVKVWDLKSTDCLQTFKP 388 (512)
Q Consensus 331 ~i~d~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~~~~~~~ 388 (512)
..++...+. .+ ..+. ........++|.|+|.+.++.+. .|.|.-++... . +..
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~----~p~ 182 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-E----PAP 182 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-S----BCT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-C----CCC
Confidence 888876432 11 1233 11123468999999976666432 14566565542 1 110
Q ss_pred CCCC-----------CCCCceeEEEEEcCCCCCeEEEEcCCCc--------EEEEecCCe---E-----------EEEee
Q 010362 389 PPPL-----------RGGDASVNSVHLFPKNPDHIVVCNKTSS--------IYIMTLQGQ---V-----------VKSFS 435 (512)
Q Consensus 389 ~~~~-----------~~~~~~i~~~~~~~~~~~~l~~~~~~~~--------i~~~~~~~~---~-----------~~~~~ 435 (512)
..+. .........+++.|....++++-..... +......+. . .....
T Consensus 183 ~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 262 (352)
T 2ism_A 183 GNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLY 262 (352)
T ss_dssp TCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred CCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeE
Confidence 0000 0001235667888854355554443333 222211110 0 00000
Q ss_pred CCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCee------EEeccccCCCeEEEEEcCCCCeEEEEE
Q 010362 436 SGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKL------EHLMKVHEKDVIGVTHHPHRNLLATYG 502 (512)
Q Consensus 436 ~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~------~~~~~~h~~~v~~v~~~p~~~~l~s~~ 502 (512)
.. ........+++ .+|..+++.-..+.|...++..... ...+-.....+..+++.|||.++++..
T Consensus 263 ~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 263 FW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred ec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 00 01123456666 4666666655677888877654321 112212235789999999998777654
No 309
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.00 E-value=4.1e-05 Score=78.14 Aligned_cols=217 Identities=10% Similarity=-0.024 Sum_probs=126.9
Q ss_pred CCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe-CCCcEEEEeCCC----CceeEEeeCCccceeEEEEcC
Q 010362 284 DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS-FDSTARIHGLKS----GKLLKEFRGHSSYVNDAIFTN 358 (512)
Q Consensus 284 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~i~d~~~----~~~~~~~~~~~~~v~~~~~~~ 358 (512)
.+.|+..++.+......+. ....+..++|++.+..|+.+. ..+.|+.+++.. ......+.........+++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp TTC-CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred ccceEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 4578888887766544332 334577899998777776664 457899999865 222222222222356788885
Q ss_pred CC-CEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-CcEEEEecCCeEEEEeeC
Q 010362 359 DG-SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQVVKSFSS 436 (512)
Q Consensus 359 ~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-~~i~~~~~~~~~~~~~~~ 436 (512)
.+ +++++-...+.|.++++........+.. .......+++.|.+..++++-... +.|..+++.+.....+..
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~------~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRE------QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCC------SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeC------CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 44 4445545578899999875543322221 123456788888775666555443 788888887654443322
Q ss_pred CcccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCeeEEeccc--cCCCeEEEEEcCCCCeEEEEECCCeEEEec
Q 010362 437 GKREGGDFVAACVSPKGEWIYCVG-EDRNLYCFSHQSGKLEHLMKV--HEKDVIGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 437 ~~~~~~~~~~~~~s~~g~~l~~g~-~dg~i~iwd~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
.. -.....++++|++..|+.+. ..+.|..+++........+.. ......+|++..+ .++++....+.|..++
T Consensus 537 ~~--l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 537 EN--IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 611 (699)
T ss_dssp SS--CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEE
T ss_pred CC--CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEE
Confidence 11 23356799999866665554 677899999865433333221 1223345555543 4444555566777665
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.98 E-value=0.0016 Score=59.04 Aligned_cols=225 Identities=10% Similarity=0.043 Sum_probs=114.8
Q ss_pred CCCeEEEEe-CC-----CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCC-----CcEEEEeCCCCc---
Q 010362 274 DSEMLASGS-QD-----GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-----STARIHGLKSGK--- 339 (512)
Q Consensus 274 ~~~~l~s~~-~d-----g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~--- 339 (512)
++.+++.|+ .+ ..+.+||+.+++-...-.......-.+++ ..++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 345566665 32 36888998877643221111111111222 2356777777755 468999988766
Q ss_pred eeEE--eeCCccceeEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeE
Q 010362 340 LLKE--FRGHSSYVNDAIFTNDGSRVVTASSD-----CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHI 412 (512)
Q Consensus 340 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 412 (512)
-... +.........+. .++..++.|+.+ ..+.+||+.+.+-...-..+..... ...+.+ +..++
T Consensus 93 W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~---~~~iy 163 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG----AGLVVA---SGVIY 163 (301)
T ss_dssp CEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS----CEEEEE---TTEEE
T ss_pred eEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc----ceEEEE---CCEEE
Confidence 3221 111111112222 256666776643 3588899887653332221211111 111122 23566
Q ss_pred EEEcCC-----CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCeeEEe--cc
Q 010362 413 VVCNKT-----SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQSGKLEHL--MK 480 (512)
Q Consensus 413 ~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~ 480 (512)
+.|+.+ ..+..||.....................+. .+++.++.|+.+ ..+.+||..+.+-... +.
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC
Confidence 666644 458899988665555533322221112222 266777777754 4699999988764433 22
Q ss_pred ccCCCeEEEEEcCCCCeEEEEECC-----CeEEEecC
Q 010362 481 VHEKDVIGVTHHPHRNLLATYGED-----CTMKLWKP 512 (512)
Q Consensus 481 ~h~~~v~~v~~~p~~~~l~s~~~d-----g~i~iW~~ 512 (512)
........+.+ ++.+++.||.+ ..|.+|||
T Consensus 242 ~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 242 TPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred CcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence 11112222333 66777777765 34566664
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.93 E-value=0.0042 Score=56.20 Aligned_cols=224 Identities=13% Similarity=0.139 Sum_probs=112.4
Q ss_pred CCeEEEEeCC----CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCC-----CcEEEEeCCCCceeEE--
Q 010362 275 SEMLASGSQD----GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-----STARIHGLKSGKLLKE-- 343 (512)
Q Consensus 275 ~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~-- 343 (512)
+.+++.|+.+ ..+..||+.+.+-...-.......-.+++. -++..++.|+.+ ..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 3455555543 357888888776332211111111112222 256677777754 3588999877643322
Q ss_pred eeCCccceeEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC-
Q 010362 344 FRGHSSYVNDAIFTNDGSRVVTASSDC-----TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK- 417 (512)
Q Consensus 344 ~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~- 417 (512)
+.........+. -++..++.|+.++ .+.+||+.+.+-...-..+... ... ++... +..+++.|+.
T Consensus 95 ~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~-~~~~~--~~~iyv~GG~~ 165 (302)
T 2xn4_A 95 MRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR----SSV-GVGVV--GGLLYAVGGYD 165 (302)
T ss_dssp CSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC----BSC-EEEEE--TTEEEEECCEE
T ss_pred CCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc----cCc-eEEEE--CCEEEEEeCCC
Confidence 111111112222 2566777777553 4778898876533322211111 111 12221 2256666653
Q ss_pred ------CCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCeeEEe--ccccCC
Q 010362 418 ------TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQSGKLEHL--MKVHEK 484 (512)
Q Consensus 418 ------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~ 484 (512)
...+..||.....................+ ..+++.++.|+.+ ..+.+||..+.+-... +.....
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR 243 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred CCCCccccEEEEEeCCCCcEEECCCCccccccccEE--EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc
Confidence 245888998866555543332221111222 2267777777754 3699999988754332 211111
Q ss_pred CeEEEEEcCCCCeEEEEECCC-----eEEEecC
Q 010362 485 DVIGVTHHPHRNLLATYGEDC-----TMKLWKP 512 (512)
Q Consensus 485 ~v~~v~~~p~~~~l~s~~~dg-----~i~iW~~ 512 (512)
.-..+.+ ++.+++.||.++ .+.+|||
T Consensus 244 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 244 NAGVCAV--NGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred cCeEEEE--CCEEEEECCcCCCcccccEEEEcC
Confidence 1122222 667777777654 3677764
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.89 E-value=0.0065 Score=55.04 Aligned_cols=232 Identities=8% Similarity=0.024 Sum_probs=119.4
Q ss_pred CEEEEEeC--CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC----CeEEEEEccCCeeeE
Q 010362 226 QFLVSCSF--DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD----GKIKVWRIRSGQCLR 299 (512)
Q Consensus 226 ~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d----g~i~vwd~~~~~~~~ 299 (512)
.+++.|+. ...+.+||..+++-...-.... ....-..+. -++.+++.|+.+ ..+.+||+.+++-..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFE------KRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSC------CCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCc------ccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEE
Confidence 34555654 3578899988776433211111 111112222 256677777754 678899998876433
Q ss_pred EeccccccCeEEEEEecCCCEEEEEeCC------CcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC-----
Q 010362 300 RLERAHSEGVTSLVFSRDGSQILSTSFD------STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS----- 368 (512)
Q Consensus 300 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----- 368 (512)
.-.......-.+++. -++..++.|+.+ ..+.+||..+.+-...-..........+..-+++.++.|+.
T Consensus 85 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 85 KLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNV 163 (306)
T ss_dssp EECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTT
T ss_pred CCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCC
Confidence 222111111112222 266777777765 46889998776533221111111111111225566666653
Q ss_pred ----CCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-----CcEEEEecCCeEEEEeeCCcc
Q 010362 369 ----DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-----SSIYIMTLQGQVVKSFSSGKR 439 (512)
Q Consensus 369 ----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~~~~~ 439 (512)
-..+.+||+.+.+-...-..+... .. .++... +..+++.|+.+ ..+.+||..............
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~-~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 236 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELCPMIEAR----KN-HGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW 236 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEECCCSSCC----BS-CEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC
T ss_pred cccccceEEEeCCCCCeEEECCCccchh----hc-ceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC
Confidence 345889999876533221111111 11 112222 33566666543 458889988766555543332
Q ss_pred cCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCee
Q 010362 440 EGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQSGKL 475 (512)
Q Consensus 440 ~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~~~~ 475 (512)
.......+.+ ++..++.|+.+ ..+.+||..+.+-
T Consensus 237 ~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 237 KGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp CBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 2222222222 67788888754 4689999987653
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.88 E-value=0.0042 Score=56.24 Aligned_cols=232 Identities=11% Similarity=0.095 Sum_probs=118.0
Q ss_pred CCEEEEEeCC----CeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC-----CeEEEEEccCC
Q 010362 225 GQFLVSCSFD----GFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD-----GKIKVWRIRSG 295 (512)
Q Consensus 225 ~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~vwd~~~~ 295 (512)
+.+++.|+.+ ..+..||..+.+-...-..+. ....| ..+.+ ++.+++.|+.+ ..+.+||..+.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~----~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 87 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPS--RRCRA----GMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKD 87 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSS--CCBSC----EEEEE--TTEEEEESCBCSSSBCCCEEEEETTTT
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCc--ccccc----eEEEE--CCEEEEEeCcCCCccccceEEECCCCC
Confidence 4455566543 368888887765332211111 00111 12222 56777777754 35889998877
Q ss_pred eeeEEeccccccCeEEEEEecCCCEEEEEeCCC-----cEEEEeCCCCceeEE--eeCCccceeEEEEcCCCCEEEEEeC
Q 010362 296 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDS-----TARIHGLKSGKLLKE--FRGHSSYVNDAIFTNDGSRVVTASS 368 (512)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~ 368 (512)
+-...-.......-.+++. -++..++.|+.++ .+.+||+.+.+-... +....... +++. -+++.++.|+.
T Consensus 88 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~ 164 (302)
T 2xn4_A 88 QWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGY 164 (302)
T ss_dssp EEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCE
T ss_pred ceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCC
Confidence 6433221111111112222 2567777777653 577889876643322 11111111 1222 25566666654
Q ss_pred C-------CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-----CcEEEEecCCeEEEEeeC
Q 010362 369 D-------CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-----SSIYIMTLQGQVVKSFSS 436 (512)
Q Consensus 369 d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~~ 436 (512)
+ ..+.+||+.+.+-...-..+..... . ++... +..+++.|+.+ ..+.+||...........
T Consensus 165 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~----~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 165 DVASRQCLSTVECYNATTNEWTYIAEMSTRRSG----A-GVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp ETTTTEECCCEEEEETTTTEEEEECCCSSCCBS----C-EEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCCCCccccEEEEEeCCCCcEEECCCCcccccc----c-cEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC
Confidence 2 3588999987653332221211111 1 22222 33667776654 468899998665555543
Q ss_pred CcccCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEcCCCeeE
Q 010362 437 GKREGGDFVAACVSPKGEWIYCVGEDR-----NLYCFSHQSGKLE 476 (512)
Q Consensus 437 ~~~~~~~~~~~~~s~~g~~l~~g~~dg-----~i~iwd~~~~~~~ 476 (512)
..........+ ..+++.++.|+.++ .+.+||..+.+-.
T Consensus 238 ~~~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 238 MNMCRRNAGVC--AVNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp CSSCCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCCccccCeEE--EECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 32221111222 23677777777553 4899998877643
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.84 E-value=0.0063 Score=55.17 Aligned_cols=225 Identities=8% Similarity=-0.019 Sum_probs=114.8
Q ss_pred CeEEEEeC--CCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCC----CcEEEEeCCCCceeEEeeCCcc
Q 010362 276 EMLASGSQ--DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD----STARIHGLKSGKLLKEFRGHSS 349 (512)
Q Consensus 276 ~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~v~i~d~~~~~~~~~~~~~~~ 349 (512)
.+++.|+. ...+.+||..+++-...-.......-.+++. -++..++.|+.+ ..+.+||+.+.+-...-.....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 34555654 3578999988876432211111111112222 356677777754 5688999877654322111111
Q ss_pred ceeEEEEcCCCCEEEEEeCC------CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC------
Q 010362 350 YVNDAIFTNDGSRVVTASSD------CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK------ 417 (512)
Q Consensus 350 ~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------ 417 (512)
.....+..-++..++.|+.+ ..+.+||..+.+-...-..+..... ...+.+ +..+++.|+.
T Consensus 92 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~---~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 92 RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS----HGMVEA---NGLIYVCGGSLGNNVS 164 (306)
T ss_dssp CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS----CEEEEE---TTEEEEECCEESCTTT
T ss_pred ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce----eEEEEE---CCEEEEECCCCCCCCc
Confidence 11111112256667777654 4588999887653332221211111 111222 2256666553
Q ss_pred ---CCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCeeEEe--ccccCCCeE
Q 010362 418 ---TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQSGKLEHL--MKVHEKDVI 487 (512)
Q Consensus 418 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~ 487 (512)
...+..||.....................+.+ +++.++.|+.+ ..+.+||..+.+-... +........
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 242 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVK 242 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcccee
Confidence 45588999986655555433222111122222 66777777643 3689999988754332 222222223
Q ss_pred EEEEcCCCCeEEEEECC-----CeEEEecC
Q 010362 488 GVTHHPHRNLLATYGED-----CTMKLWKP 512 (512)
Q Consensus 488 ~v~~~p~~~~l~s~~~d-----g~i~iW~~ 512 (512)
++.+ ++.+++.||.+ ..+.+||+
T Consensus 243 ~~~~--~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 243 CAAV--GSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp EEEE--TTEEEEEECBCSSSBCCEEEEEET
T ss_pred EEEE--CCEEEEEeCcCCCeeeeeEEEEcC
Confidence 3333 66788888754 45666664
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.84 E-value=0.0078 Score=55.31 Aligned_cols=189 Identities=15% Similarity=0.161 Sum_probs=105.7
Q ss_pred eEEEEECCCCCEEEEE------------eCCCeEEEEEcCCCee-eccccccccceeeccCcceeEEEEcC--CCC-eEE
Q 010362 216 AECARFSPDGQFLVSC------------SFDGFIEVWDYLSGKL-KKDLQYQADETFMMHDETVLCIEFSR--DSE-MLA 279 (512)
Q Consensus 216 v~~~~~s~~~~~l~sg------------~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~h~~~v~~l~~s~--~~~-~l~ 279 (512)
.-.++..|+|..++++ ..+|.|.++|.++... ...+..... .+.........+.+.+ ++. +|+
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~-~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGN-TLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECS-SCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCC-CCCcCceeeeeeEEEECCCCcEEEE
Confidence 4456678877555554 1689999999874311 112221100 0111234566777655 343 444
Q ss_pred EEe-C--CCeEEEEEccCCe----eeEEeccccccCeEEEEEecCCCEEEEEe-----------------CCCcEEEEeC
Q 010362 280 SGS-Q--DGKIKVWRIRSGQ----CLRRLERAHSEGVTSLVFSRDGSQILSTS-----------------FDSTARIHGL 335 (512)
Q Consensus 280 s~~-~--dg~i~vwd~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-----------------~dg~v~i~d~ 335 (512)
++. . +.+|.+|++..+. .+..+....-...+.+.+.++|...++.. ..|.|+.+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 442 2 4678888876542 23333322235688999999998666653 1245666654
Q ss_pred CCCceeEEeeCCccceeEEEEcCCCCEEEEEe-CCCcEEEEeCCC-Ccee--eecCCCCCCCCCCceeEEEEEcCC-CCC
Q 010362 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS-SDCTVKVWDLKS-TDCL--QTFKPPPPLRGGDASVNSVHLFPK-NPD 410 (512)
Q Consensus 336 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~--~~~~~~~~~~~~~~~i~~~~~~~~-~~~ 410 (512)
++. ..+...-...+.++|+||++.++.+. ..+.|..|++.. +... ..+. .......+++.+. + .
T Consensus 211 --~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-------~~g~PDGi~vD~e~G-~ 279 (355)
T 3sre_A 211 --NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-------FDTLVDNISVDPVTG-D 279 (355)
T ss_dssp --TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-------CSSEEEEEEECTTTC-C
T ss_pred --CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-------CCCCCceEEEeCCCC-c
Confidence 332 22222234578999999998877665 467899999863 2221 1221 1345667777763 4 4
Q ss_pred eEEEEc
Q 010362 411 HIVVCN 416 (512)
Q Consensus 411 ~l~~~~ 416 (512)
+.+++.
T Consensus 280 lwva~~ 285 (355)
T 3sre_A 280 LWVGCH 285 (355)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 555443
No 316
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.79 E-value=0.0022 Score=68.37 Aligned_cols=234 Identities=9% Similarity=0.121 Sum_probs=140.0
Q ss_pred CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEE
Q 010362 234 DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLV 313 (512)
Q Consensus 234 dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 313 (512)
..+|.|.|+.++....+-+. .--+.-.+|..+.+|.-. ..++.|+|+++...++.+. ...+|.--.
T Consensus 47 ~~~vvIidl~~~~~~~rrpi-----------~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~--~~e~VvfWk 112 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPI-----------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWK 112 (1630)
T ss_pred CceEEEEECCCCCCcccccc-----------cchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccc--cCCCceEEE
Confidence 34789999887654322211 112334567777666654 6799999999988887775 456777777
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCC-CceeEEeeCC----ccceeEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCc
Q 010362 314 FSRDGSQILSTSFDSTARIHGLKS-GKLLKEFRGH----SSYVNDAIFTNDGSRVVTAS-------SDCTVKVWDLKSTD 381 (512)
Q Consensus 314 ~~~~~~~l~~~~~dg~v~i~d~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~ 381 (512)
|-.+ +.|+..+ +..|+-|++.. ..+.+.+..| +..|..-..+++.++++..| -.|.+.+|....+.
T Consensus 113 Wis~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~ 190 (1630)
T 1xi4_A 113 WISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 190 (1630)
T ss_pred ecCC-CeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc
Confidence 7644 4555554 56899999964 2444445444 34577777788989887544 34778888876543
Q ss_pred eeeecCCCCCCCCCCceeEEEEEc--CCCCCeEEEEcC---CCcEEEEecCCe----E------EEEeeCCcccCCcEEE
Q 010362 382 CLQTFKPPPPLRGGDASVNSVHLF--PKNPDHIVVCNK---TSSIYIMTLQGQ----V------VKSFSSGKREGGDFVA 446 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~~~---~~~i~~~~~~~~----~------~~~~~~~~~~~~~~~~ 446 (512)
. +. +.||......+... +....++..+.. .+.+++.++... . +..+............
T Consensus 191 s-Q~------iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~ 263 (1630)
T 1xi4_A 191 S-QP------IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 263 (1630)
T ss_pred c-hh------hhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceE
Confidence 1 11 11222222222221 111122222222 367888887422 1 1111122222344567
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEE
Q 010362 447 ACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVT 490 (512)
Q Consensus 447 ~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~ 490 (512)
+..|+.-..++..+.-|.|++||+.+|.++..-+-...+|...+
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~ 307 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTA 307 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEec
Confidence 88888888999999999999999999987765443344444333
No 317
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.77 E-value=0.022 Score=52.03 Aligned_cols=152 Identities=14% Similarity=0.065 Sum_probs=86.6
Q ss_pred cCcCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC---CCeEEEE---eCC
Q 010362 211 GTKSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD---SEMLASG---SQD 284 (512)
Q Consensus 211 ~h~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~~l~s~---~~d 284 (512)
..-...+.++|.|+|+++++--..|.|++++..++........ ...+.........|+++|+ +..|... ..+
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~--~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEV--PGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC--TTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeeccc--CceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3345678999999999777766589999998655543211000 0122234567899999995 3444433 234
Q ss_pred CeEEEEEccCC----------eee-EEeccccccCeEEEEEecCCCEEEEEeC-------------CCcEEEEeCCCC--
Q 010362 285 GKIKVWRIRSG----------QCL-RRLERAHSEGVTSLVFSRDGSQILSTSF-------------DSTARIHGLKSG-- 338 (512)
Q Consensus 285 g~i~vwd~~~~----------~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~v~i~d~~~~-- 338 (512)
+.|.-|.+..+ +.+ ..+.......-..+.|.|||.+.++.+. .|.|.-.+....
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 55666665542 111 1222122234567999999987766542 355555565322
Q ss_pred ------ceeEEeeCCccceeEEEEcCCCCEEEE
Q 010362 339 ------KLLKEFRGHSSYVNDAIFTNDGSRVVT 365 (512)
Q Consensus 339 ------~~~~~~~~~~~~v~~~~~~~~~~~l~~ 365 (512)
....--.+|.+ ...++|+|+|.+.++
T Consensus 187 ~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~ 218 (347)
T 3das_A 187 PGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFAS 218 (347)
T ss_dssp TTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEE
T ss_pred CCCCCCCCeEEeeCCCC-cceEEECCCCCEEEE
Confidence 11111124544 567899998765444
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.74 E-value=0.014 Score=53.03 Aligned_cols=212 Identities=11% Similarity=0.018 Sum_probs=107.5
Q ss_pred eEEEEeCCCeEEEEEccCCeeeEEeccc-cccCeEEEEEecCCCEEEEEeC-----C------CcEEEEeCCCCceeEEe
Q 010362 277 MLASGSQDGKIKVWRIRSGQCLRRLERA-HSEGVTSLVFSRDGSQILSTSF-----D------STARIHGLKSGKLLKEF 344 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-----d------g~v~i~d~~~~~~~~~~ 344 (512)
+++.|+ ..+..||..+++-.. .... ........+...++..++.|+. . ..+..||..+.+-.. +
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-M 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-C
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-C
Confidence 344555 579999998887543 2111 1122233333457788888874 1 127788887765322 1
Q ss_pred eCCccc-e-eEEEEcCCCCEEEEEeCC--------CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEE
Q 010362 345 RGHSSY-V-NDAIFTNDGSRVVTASSD--------CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVV 414 (512)
Q Consensus 345 ~~~~~~-v-~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 414 (512)
.....+ . .+++. -++..++.|+.+ ..+.+||..+.+-...-..+... ... ++... +..+++.
T Consensus 83 ~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~-~~~~~--~~~iyv~ 154 (315)
T 4asc_A 83 PPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV----YGH-TVLSH--MDLVYVI 154 (315)
T ss_dssp CCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC----BSC-EEEEE--TTEEEEE
T ss_pred CCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc----cce-eEEEE--CCEEEEE
Confidence 111111 1 11122 255666666632 45889999876532221111111 111 11221 2256666
Q ss_pred EcC------CCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEcCCCeeEEec--cc
Q 010362 415 CNK------TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDR-----NLYCFSHQSGKLEHLM--KV 481 (512)
Q Consensus 415 ~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg-----~i~iwd~~~~~~~~~~--~~ 481 (512)
|+. ...+..||.....................+ .-+++.++.|+.++ .+.+||..+.+-...- ..
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 232 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ 232 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSS
T ss_pred eCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCC
Confidence 665 246889998866555544332221111222 22677777777544 5889999887544332 21
Q ss_pred cCCCeEEEEEcCCCCeEEEEECC
Q 010362 482 HEKDVIGVTHHPHRNLLATYGED 504 (512)
Q Consensus 482 h~~~v~~v~~~p~~~~l~s~~~d 504 (512)
.......+.+ ++.+++.||.+
T Consensus 233 ~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 233 ERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp CCBSCEEEEE--TTEEEEEEEEE
T ss_pred cccceeEEEE--CCEEEEECCcc
Confidence 1122223333 56777777764
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.74 E-value=0.01 Score=53.84 Aligned_cols=232 Identities=9% Similarity=0.026 Sum_probs=119.3
Q ss_pred CCCCEEEEEeCC----CeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC----C-----CeEEE
Q 010362 223 PDGQFLVSCSFD----GFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ----D-----GKIKV 289 (512)
Q Consensus 223 ~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----d-----g~i~v 289 (512)
-++.+++.|+.+ ..+.+||..+++-...-..+.. ..+| ..+.+ ++.+++.|+. + ..+.+
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~----~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~ 94 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVP--RSGL----AGCVV--GGLLYAVGGRNNSPDGNTDSSALDC 94 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSC--CBSC----EEEEE--TTEEEEECCEEEETTEEEECCCEEE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcc--cccc----eEEEE--CCEEEEECCCcCCCCCCeecceEEE
Confidence 356677777642 3688999887764432111110 1112 12222 5667777765 2 46888
Q ss_pred EEccCCeeeEEeccccc-cCeEEEEEecCCCEEEEEeCC-----CcEEEEeCCCCceeEE--eeCCccceeEEEEcCCCC
Q 010362 290 WRIRSGQCLRRLERAHS-EGVTSLVFSRDGSQILSTSFD-----STARIHGLKSGKLLKE--FRGHSSYVNDAIFTNDGS 361 (512)
Q Consensus 290 wd~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~ 361 (512)
||+.+.+-...-..... .....+.+ ++..++.|+.+ ..+.+||+.+.+-... +.........+.+ ++.
T Consensus 95 ~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 170 (308)
T 1zgk_A 95 YNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRL 170 (308)
T ss_dssp EETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE
T ss_pred ECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCE
Confidence 99887763322111111 11222222 56677776643 4688899876643221 1111111122222 566
Q ss_pred EEEEEeCC-----CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-----CcEEEEecCCeEE
Q 010362 362 RVVTASSD-----CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-----SSIYIMTLQGQVV 431 (512)
Q Consensus 362 ~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-----~~i~~~~~~~~~~ 431 (512)
.++.|+.+ ..+.+||+.+.+-...-..+.. ......+.+ +..+++.|+.+ ..+.+||+.....
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI----RSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC----CBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc----cccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 66776654 4588999887653322111111 111122222 33667777654 5689999987665
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCee
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQSGKL 475 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~~~~ 475 (512)
...............+. -+++.++.|+.+ ..+.+||..+.+-
T Consensus 244 ~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 244 TFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp EECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred EECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 55543322221122222 267777777744 3588888877653
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.73 E-value=0.0073 Score=54.82 Aligned_cols=225 Identities=11% Similarity=0.032 Sum_probs=113.6
Q ss_pred CCCeEEEEeCC----CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeC----C-----CcEEEEeCCCCce
Q 010362 274 DSEMLASGSQD----GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF----D-----STARIHGLKSGKL 340 (512)
Q Consensus 274 ~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d-----g~v~i~d~~~~~~ 340 (512)
++.+++.|+.+ ..+.+||..+++-...-.......-.+++. -++..++.|+. + ..+.+||+.+.+-
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 45566666632 368889988776433211111111112222 25667777765 2 4688999877643
Q ss_pred eEE--eeCCccceeEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEE
Q 010362 341 LKE--FRGHSSYVNDAIFTNDGSRVVTASSD-----CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIV 413 (512)
Q Consensus 341 ~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 413 (512)
... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+.... ....+.+ +..+++
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~---~~~iyv 173 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI----GVGVAVL---NRLLYA 173 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB----SCEEEEE---TTEEEE
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc----ceEEEEE---CCEEEE
Confidence 221 1111111222222 56666666543 358889988765333222121111 1112222 336666
Q ss_pred EEcCC-----CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCeeEEe--ccc
Q 010362 414 VCNKT-----SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQSGKLEHL--MKV 481 (512)
Q Consensus 414 ~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~ 481 (512)
.|+.+ ..+..||.....................+.+ +++.++.|+.+ ..+.+||+.+.+-... +..
T Consensus 174 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 251 (308)
T 1zgk_A 174 VGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKH 251 (308)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSS
T ss_pred EeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCC
Confidence 66544 4588999886655554433222222222222 67777777754 4699999988764432 221
Q ss_pred cCCCeEEEEEcCCCCeEEEEECC-----CeEEEecC
Q 010362 482 HEKDVIGVTHHPHRNLLATYGED-----CTMKLWKP 512 (512)
Q Consensus 482 h~~~v~~v~~~p~~~~l~s~~~d-----g~i~iW~~ 512 (512)
.......+.. ++.+++.||.+ ..+.+|||
T Consensus 252 ~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 252 RRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp CCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET
T ss_pred CccceEEEEE--CCEEEEEcCcCCCcccceEEEEcC
Confidence 1112222222 56777777754 34566654
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.69 E-value=0.09 Score=56.63 Aligned_cols=221 Identities=15% Similarity=0.128 Sum_probs=115.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC------CCeEEEEeC-CCeE
Q 010362 215 HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD------SEMLASGSQ-DGKI 287 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~------~~~l~s~~~-dg~i 287 (512)
.|.+++.+. .+++.++ ++.+.++.++.++..... . ..-...|.|+++.|. +++++.|.. |+++
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~------~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv 584 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQIS------H-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA 584 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEE------E-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEE
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeec------c-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEE
Confidence 455444432 3555554 677888877765432211 1 113567999999863 468999997 9999
Q ss_pred EEEEccCCeeeEEeccccccCeEEEEEec--CCCEEEEEeCCCcEEEEeC--CCCceeEE--eeCCccceeEEEEcCCCC
Q 010362 288 KVWRIRSGQCLRRLERAHSEGVTSLVFSR--DGSQILSTSFDSTARIHGL--KSGKLLKE--FRGHSSYVNDAIFTNDGS 361 (512)
Q Consensus 288 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~i~d~--~~~~~~~~--~~~~~~~v~~~~~~~~~~ 361 (512)
+|+++.+.+.+.....+......++.+.. ...+|.+|-.||.+..+.+ .++..... ..-...++.-..+...+.
T Consensus 585 ~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~ 664 (1158)
T 3ei3_A 585 RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLST 664 (1158)
T ss_dssp EEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSC
T ss_pred EEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCc
Confidence 99999887666544322223455554432 3457889999998765544 45544322 111233444444444444
Q ss_pred EEEEEeCCCcEEEEeCCCCceeee-cCCCCCCCCCCceeEEEE-EcCC-CCCeEEEEcCCCcEEEEecC---CeEEEEee
Q 010362 362 RVVTASSDCTVKVWDLKSTDCLQT-FKPPPPLRGGDASVNSVH-LFPK-NPDHIVVCNKTSSIYIMTLQ---GQVVKSFS 435 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~i~~~~-~~~~-~~~~l~~~~~~~~i~~~~~~---~~~~~~~~ 435 (512)
.-+.+..+....+|.-+ ++.... +. ...+..++ |+.. .++-++..+ ++.+++..++ .-..+.+.
T Consensus 665 ~~V~a~s~rp~liy~~~-~~l~~s~l~--------~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip 734 (1158)
T 3ei3_A 665 TNVFACSDRPTVIYSSN-HKLVFSNVN--------LKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP 734 (1158)
T ss_dssp EEEEEESSSCEEEEESS-SSEEEEEBS--------SSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE
T ss_pred eeEEEECCCCEEEEEcC-CceEEeccC--------hHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe
Confidence 33333334444444433 221111 11 01222222 3222 234455444 4458887764 22223332
Q ss_pred CCcccCCcEEEEEECCCCCEEEEE
Q 010362 436 SGKREGGDFVAACVSPKGEWIYCV 459 (512)
Q Consensus 436 ~~~~~~~~~~~~~~s~~g~~l~~g 459 (512)
. +..+..++++|+.+.++.+
T Consensus 735 L----~~Tprri~y~~~~~~~~v~ 754 (1158)
T 3ei3_A 735 L----YESPRKICYQEVSQCFGVL 754 (1158)
T ss_dssp C----SSEEEEEEEEGGGTEEEEE
T ss_pred C----CCCceEEEEcCCCCEEEEE
Confidence 2 2346677777766654443
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.68 E-value=0.043 Score=52.65 Aligned_cols=113 Identities=16% Similarity=0.126 Sum_probs=64.3
Q ss_pred cCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCC---CCeEEEEeC------
Q 010362 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRD---SEMLASGSQ------ 283 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~~l~s~~~------ 283 (512)
-...+.++|.|+|+++++-...+.|++++..++.......................|+|+|+ +..|..+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 34578999999999777655445788887655543221111100000013456789999995 555554432
Q ss_pred -------CCeEEEEEccCC-------eeeE-EeccccccCeEEEEEecCCCEEEEEe
Q 010362 284 -------DGKIKVWRIRSG-------QCLR-RLERAHSEGVTSLVFSRDGSQILSTS 325 (512)
Q Consensus 284 -------dg~i~vwd~~~~-------~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~ 325 (512)
...|.-+++..+ +.+. .+..........++|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 134655655432 1111 12212234578999999998777654
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.67 E-value=0.02 Score=52.00 Aligned_cols=232 Identities=9% Similarity=0.008 Sum_probs=115.2
Q ss_pred EEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC----C-------CeEEEEEccCC
Q 010362 227 FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ----D-------GKIKVWRIRSG 295 (512)
Q Consensus 227 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----d-------g~i~vwd~~~~ 295 (512)
+++.|+ ..+.+||..+++-.. .... .........+...++.+++.|+. + ..+.+||..++
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~------~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 77 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLS------SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS 77 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECC------CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCC------CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC
Confidence 344455 578999988876432 1110 01112222233357778888873 1 12778888877
Q ss_pred eeeEEeccccccCeEEEEEecCCCEEEEEeCC--------CcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEe
Q 010362 296 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFD--------STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
+-...-.......-.+++.. ++..++.|+.+ ..+.+||..+.+-...-..........+...+++.++.|+
T Consensus 78 ~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 78 EWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp EEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred eEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeC
Confidence 64322111111111122222 56666777632 4688999877643221111111111112223556667776
Q ss_pred C-C-----CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC-----cEEEEecCCeEEEEeeC
Q 010362 368 S-D-----CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS-----SIYIMTLQGQVVKSFSS 436 (512)
Q Consensus 368 ~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~-----~i~~~~~~~~~~~~~~~ 436 (512)
. + ..+.+||+.+.+-...-..+.. ......+.+ +..+++.|+.++ .+..||...........
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTA----RSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSC----CBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCc----hhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 5 2 4688999887643322111111 111112222 336677776544 47888888665555543
Q ss_pred CcccCCcEEEEEECCCCCEEEEEeCC--------------CeEEEEEcCCCeeEE
Q 010362 437 GKREGGDFVAACVSPKGEWIYCVGED--------------RNLYCFSHQSGKLEH 477 (512)
Q Consensus 437 ~~~~~~~~~~~~~s~~g~~l~~g~~d--------------g~i~iwd~~~~~~~~ 477 (512)
..........+. -+++.++.|+.+ ..+.+||..+.+-..
T Consensus 230 ~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 230 FPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEG 282 (315)
T ss_dssp CSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEE
T ss_pred CCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhh
Confidence 322222222222 266777777753 247788888765443
No 324
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.66 E-value=0.0097 Score=54.67 Aligned_cols=191 Identities=16% Similarity=0.117 Sum_probs=109.5
Q ss_pred eEEEEcCCCCeEEEE------------eCCCeEEEEEccC--CeeeEEecc-c-----cccCeEEEEEec--CCC-EEEE
Q 010362 267 LCIEFSRDSEMLASG------------SQDGKIKVWRIRS--GQCLRRLER-A-----HSEGVTSLVFSR--DGS-QILS 323 (512)
Q Consensus 267 ~~l~~s~~~~~l~s~------------~~dg~i~vwd~~~--~~~~~~~~~-~-----~~~~i~~~~~~~--~~~-~l~~ 323 (512)
-.++..|+|..++++ ..+|.|.++|..+ ++. ..+.. + ..-....+.+.+ ++. +|++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 344556665444444 2689999999874 222 22221 1 224677788766 343 4544
Q ss_pred Ee-C--CCcEEEEeCCCC-c---eeEEeeCC-ccceeEEEEcCCCCEEEEEeC-----------------CCcEEEEeCC
Q 010362 324 TS-F--DSTARIHGLKSG-K---LLKEFRGH-SSYVNDAIFTNDGSRVVTASS-----------------DCTVKVWDLK 378 (512)
Q Consensus 324 ~~-~--dg~v~i~d~~~~-~---~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~~ 378 (512)
+. . +.+|.+|++... . .+..+.+. -...+++.+.++|.+.++... .|.|..+|..
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 43 2 456777766543 2 23334332 235789999999987776541 2445555542
Q ss_pred CCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC--CeEE-EEeeCCcccCCcEEEEEECC-CCC
Q 010362 379 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ--GQVV-KSFSSGKREGGDFVAACVSP-KGE 454 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~s~-~g~ 454 (512)
+..... ..-...+.++|+|++..++++-+..+.|+.|++. +... ..... ..+..-.+++.+ +|+
T Consensus 212 --~~~~~~-------~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~---~~g~PDGi~vD~e~G~ 279 (355)
T 3sre_A 212 --DVRVVA-------EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS---FDTLVDNISVDPVTGD 279 (355)
T ss_dssp --CCEEEE-------EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE---CSSEEEEEEECTTTCC
T ss_pred --eEEEee-------cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe---CCCCCceEEEeCCCCc
Confidence 211111 1123568999999997777777888999999986 3221 11111 134567899999 599
Q ss_pred EEEEEeCC-CeEEEEEc
Q 010362 455 WIYCVGED-RNLYCFSH 470 (512)
Q Consensus 455 ~l~~g~~d-g~i~iwd~ 470 (512)
+.+++..+ +.|..|+.
T Consensus 280 lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 280 LWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEEEESCHHHHHSCCT
T ss_pred EEEEecCCceEEEEECC
Confidence 87766533 34444443
No 325
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.63 E-value=0.029 Score=51.95 Aligned_cols=244 Identities=11% Similarity=0.132 Sum_probs=125.0
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEec------cccccCeEEEEEecC---CCEEEEEe-C-------
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE------RAHSEGVTSLVFSRD---GSQILSTS-F------- 326 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------~~~~~~i~~~~~~~~---~~~l~~~~-~------- 326 (512)
.....|+|.|+|+.|+++...|.|++++. .+.....+. .........++++|+ +..|+++. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 35689999999983445567899999984 343221111 112346789999996 45555443 2
Q ss_pred CCcEEEEeCCCC--c--eeEE-eeC------CccceeEEEEcCCCCEEEEEeCC-------------CcEEEEeCCCCce
Q 010362 327 DSTARIHGLKSG--K--LLKE-FRG------HSSYVNDAIFTNDGSRVVTASSD-------------CTVKVWDLKSTDC 382 (512)
Q Consensus 327 dg~v~i~d~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~ 382 (512)
...|..++.... . .... +.. .......+.|.|+|.+.++.+.. |.|.-+|....-.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666666433 1 1111 111 11124679999999666655432 4566666543200
Q ss_pred ee-ecC-----CCCCCCCCCceeEEEEEcCCCCCeEEEEcC-CCcEEEEecC-CeE----EEE---------e-------
Q 010362 383 LQ-TFK-----PPPPLRGGDASVNSVHLFPKNPDHIVVCNK-TSSIYIMTLQ-GQV----VKS---------F------- 434 (512)
Q Consensus 383 ~~-~~~-----~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-~~~i~~~~~~-~~~----~~~---------~------- 434 (512)
.. .+. ..............++|.|....++++-.. ++.-.+.-+. +.. ... +
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 00 000 000000011346778888844244433222 1111111111 000 000 0
Q ss_pred eCCc-------ccCCcEEEEEECC-------CCCEEEEEeCCCeEEEEEcCCCeeEEe---ccccCCCeEEEEEcCCCCe
Q 010362 435 SSGK-------REGGDFVAACVSP-------KGEWIYCVGEDRNLYCFSHQSGKLEHL---MKVHEKDVIGVTHHPHRNL 497 (512)
Q Consensus 435 ~~~~-------~~~~~~~~~~~s~-------~g~~l~~g~~dg~i~iwd~~~~~~~~~---~~~h~~~v~~v~~~p~~~~ 497 (512)
.... .+......+.+.. +|.++++.-..+.|...++..++.... +......+..+++.|||.+
T Consensus 257 ~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~l 336 (353)
T 2g8s_A 257 VAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYL 336 (353)
T ss_dssp CTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCE
T ss_pred CCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcE
Confidence 0000 0112355666643 577777776788888888876654322 2223357899999999997
Q ss_pred EEEEE-CCCeEE
Q 010362 498 LATYG-EDCTMK 508 (512)
Q Consensus 498 l~s~~-~dg~i~ 508 (512)
+++.. .+|.|.
T Consensus 337 yv~td~~~g~I~ 348 (353)
T 2g8s_A 337 YVLTDESSGELL 348 (353)
T ss_dssp EEEECSTTEEEE
T ss_pred EEEEeCCCCEEE
Confidence 76543 456553
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0088 Score=54.42 Aligned_cols=114 Identities=14% Similarity=0.202 Sum_probs=72.6
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEE---EcCCCCeEEEE-eCCCeEEEEEccCCeeeEEe
Q 010362 226 QFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIE---FSRDSEMLASG-SQDGKIKVWRIRSGQCLRRL 301 (512)
Q Consensus 226 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~---~s~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~ 301 (512)
..+++++.||.|.-.|..+|+....+.... ..++.... ...++..++.. +.||.|..++..+|.....+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~-------~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN-------FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL 83 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGG-------SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCc-------cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence 468889999999999999999887765420 01111110 00133333333 57999999999888655544
Q ss_pred cccc---ccCeEE---EEE-----ecCCCEEEEEeCCCcEEEEeCCCCceeEEeeC
Q 010362 302 ERAH---SEGVTS---LVF-----SRDGSQILSTSFDSTARIHGLKSGKLLKEFRG 346 (512)
Q Consensus 302 ~~~~---~~~i~~---~~~-----~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~ 346 (512)
.... ..++.. ... ...+..+++|+.+|.+...|+++|+.+..+..
T Consensus 84 ~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 84 SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 3211 112221 000 01456788999999999999999999998864
No 327
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.45 E-value=0.042 Score=52.64 Aligned_cols=273 Identities=10% Similarity=0.090 Sum_probs=156.8
Q ss_pred EEEEeCCCeEEEEEcCCCeeeccccccccceeec-------------------cCcceeEEEEcC---CCCeEEEEeC-C
Q 010362 228 LVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMM-------------------HDETVLCIEFSR---DSEMLASGSQ-D 284 (512)
Q Consensus 228 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-------------------h~~~v~~l~~s~---~~~~l~s~~~-d 284 (512)
+.+|+..|.|+|+-+-+++.+..+.........| ....=..+++.. ||++|..-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 6788899999999998888776654322211111 011112233332 6778887764 5
Q ss_pred CeEEEEEccCCeeeEEeccccccCeEEEEEe--cCCCEEEEEeC-------CCcE------------EEEeCCCCceeEE
Q 010362 285 GKIKVWRIRSGQCLRRLERAHSEGVTSLVFS--RDGSQILSTSF-------DSTA------------RIHGLKSGKLLKE 343 (512)
Q Consensus 285 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~-------dg~v------------~i~d~~~~~~~~~ 343 (512)
..|-..+++..++-+.+..+....+..+.|- |+..++++++. ||.. ...|..+.+....
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 6788889998888777776778889999996 68888888875 2321 1122223332222
Q ss_pred eeCCccceeEEEEcCCCCEEEEEeCC---------------CcEEEEeCCC-------CceeeecC--CCCCCC------
Q 010362 344 FRGHSSYVNDAIFTNDGSRVVTASSD---------------CTVKVWDLKS-------TDCLQTFK--PPPPLR------ 393 (512)
Q Consensus 344 ~~~~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~-------~~~~~~~~--~~~~~~------ 393 (512)
+.- .+....+...+++.+.++.+.+ ..+.++|+.. ++.. .+. ....+.
T Consensus 233 v~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~-~~~g~gv~ViD~~~~~~ 310 (638)
T 3sbq_A 233 VIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFI-TLGDSKTPVLDGRKKDG 310 (638)
T ss_dssp EEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCB-CCTTCCCCEEECSCBTT
T ss_pred EEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeE-EECCCCeeEEccccccc
Confidence 211 1223345567778887776632 1345555421 1100 000 000000
Q ss_pred ---------CCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC-------eE---EEEeeCCcccCCcEEEEEECCCCC
Q 010362 394 ---------GGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG-------QV---VKSFSSGKREGGDFVAACVSPKGE 454 (512)
Q Consensus 394 ---------~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~s~~g~ 454 (512)
....+...+..+|++...++.+-.+.++.+++++. +. .........-+......+|.++|+
T Consensus 311 ~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~ 390 (638)
T 3sbq_A 311 KDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN 390 (638)
T ss_dssp BCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE
T ss_pred cCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc
Confidence 01134556788999977788888899999999872 11 000011111244567899999995
Q ss_pred EEEEEeCCCeEEEEEcCCC----------eeEEeccccCCCeEEE-----EEcCCCCeEEEEE
Q 010362 455 WIYCVGEDRNLYCFSHQSG----------KLEHLMKVHEKDVIGV-----THHPHRNLLATYG 502 (512)
Q Consensus 455 ~l~~g~~dg~i~iwd~~~~----------~~~~~~~~h~~~v~~v-----~~~p~~~~l~s~~ 502 (512)
-..+---|..|..|++... ..+..+..|-.+-.-. .-.|+|++|++..
T Consensus 391 aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 391 AYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 4444458999999998753 3445554443322211 1246788888764
No 328
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.42 E-value=0.064 Score=48.20 Aligned_cols=210 Identities=7% Similarity=0.056 Sum_probs=119.5
Q ss_pred CCCCEEEEEe--CCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCC--------------Ce
Q 010362 223 PDGQFLVSCS--FDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQD--------------GK 286 (512)
Q Consensus 223 ~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d--------------g~ 286 (512)
++|.+++... .++.|...+.+.... ..+. .. .+--++++|.+|+-+... ..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~-~~l~----------~~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~ 89 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNI-HKLS----------ND--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNS 89 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSC-EEEE----------EE--EEEEEEECSSEEEEEEECC------CCSSCCSEE
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCC-EEcc----------CC--ceeeEEEcCCEEEEEECCCCcccccceeccCCCe
Confidence 4666666654 245666666543322 1111 11 134457889888887653 35
Q ss_pred EEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe----CCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCE
Q 010362 287 IKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS----FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSR 362 (512)
Q Consensus 287 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 362 (512)
|+..++..++. ..+. ... +..|+++++.|+... .+..|+..++.. .....+..+.. ..++++++.
T Consensus 90 Iy~i~~dg~~~-~~l~---~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 90 LCRIKRNGHGS-TVLD---PDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp EEEEETTSCCC-EEEE---CSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTE
T ss_pred EEEEeCCCCcc-eEee---cCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCE
Confidence 77777766653 2232 111 236788888988776 344666677753 33444444432 345777888
Q ss_pred EEEEeC-CCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-CcEEEEecCCeEEEEeeCCccc
Q 010362 363 VVTASS-DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-SSIYIMTLQGQVVKSFSSGKRE 440 (512)
Q Consensus 363 l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-~~i~~~~~~~~~~~~~~~~~~~ 440 (512)
|+-.+. ...|..-++..+.....+. .... ..+.|.+..++.+...+ ..|...++++.....+....
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~~~~l~~---------~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~-- 226 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQSEALFYD---------CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEAN-- 226 (302)
T ss_dssp EEEECTTTCCEEEEETTTTEEEEEEC---------SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSC--
T ss_pred EEEEeCCCceEEEEECCCCCEEEEeC---------CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCC--
Confidence 776654 5678888887655333222 1111 23457774444444333 46888888876655554321
Q ss_pred CCcEEEEEECCCCCEEEEEe--CCCeEEEEEcCCC
Q 010362 441 GGDFVAACVSPKGEWIYCVG--EDRNLYCFSHQSG 473 (512)
Q Consensus 441 ~~~~~~~~~s~~g~~l~~g~--~dg~i~iwd~~~~ 473 (512)
+ ..++|++.+|+.++ ..+.|..-++...
T Consensus 227 ---~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 227 ---I--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp ---E--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred ---c--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 2 34788899988764 3456777776543
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.42 E-value=0.042 Score=49.93 Aligned_cols=213 Identities=14% Similarity=0.112 Sum_probs=104.6
Q ss_pred eEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeC----CC-------cEEEEeCCCCceeEE--
Q 010362 277 MLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSF----DS-------TARIHGLKSGKLLKE-- 343 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg-------~v~i~d~~~~~~~~~-- 343 (512)
+++.|+. .+..||..+++-...-...........+...++..++.|+. ++ .+..||..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 48899998887544211011112222333456778888873 12 177888876643221
Q ss_pred eeCCccceeEEEEcCCCCEEEEEeCC-------CcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEc
Q 010362 344 FRGHSSYVNDAIFTNDGSRVVTASSD-------CTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 416 (512)
Q Consensus 344 ~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 416 (512)
+.........+.+ ++..++.|+.+ ..+.+||..+.+-...-..+....+| ++.. . +..+++.|+
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-----~~~~-~-~~~iyv~GG 166 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-----NVIS-H-NGMIYCLGG 166 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-----EEEE-E-TTEEEEECC
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-----EEEE-E-CCEEEEEcC
Confidence 1111111112222 56667777653 24788898876533322222111111 1222 1 335666665
Q ss_pred C------CCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCeeEEe--ccccC
Q 010362 417 K------TSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED-----RNLYCFSHQSGKLEHL--MKVHE 483 (512)
Q Consensus 417 ~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~ 483 (512)
. ...+..||................... .++. -+++.++.|+.+ ..+.+||..+.+-... +....
T Consensus 167 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 244 (318)
T 2woz_A 167 KTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER 244 (318)
T ss_dssp EESSSCBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC
T ss_pred CCCCCCccceEEEEcCCCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc
Confidence 3 245899999866555544332222111 2222 366777777643 3578899887654332 22111
Q ss_pred CCeEEEEEcCCCCeEEEEECC
Q 010362 484 KDVIGVTHHPHRNLLATYGED 504 (512)
Q Consensus 484 ~~v~~v~~~p~~~~l~s~~~d 504 (512)
.....+.+ ++.+++.||.+
T Consensus 245 ~~~~~~~~--~~~i~v~GG~~ 263 (318)
T 2woz_A 245 SSISLVSL--AGSLYAIGGFA 263 (318)
T ss_dssp BSCEEEEE--TTEEEEECCBC
T ss_pred cceEEEEE--CCEEEEECCee
Confidence 12222222 56777777754
No 330
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.36 E-value=0.19 Score=54.17 Aligned_cols=225 Identities=10% Similarity=0.019 Sum_probs=120.3
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecC------CCEEEEEeC-CCcEEEEeCC
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRD------GSQILSTSF-DSTARIHGLK 336 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~-dg~v~i~d~~ 336 (512)
..|...+.+. .+++.++ ++.+.++.+.+++............|.|+++.|. +.++++|.. |++|+++++.
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 4566666553 4566665 6788888887765333222234678999999863 468999997 9999999998
Q ss_pred CCceeEEeeCC-ccceeEEEEc--CCCCEEEEEeCCCcEEEEeCC--CCceeeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 337 SGKLLKEFRGH-SSYVNDAIFT--NDGSRVVTASSDCTVKVWDLK--STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 337 ~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
+.+.+....-. ...+.++.+. ....+|..|-.||.+..+.+. ++.....-... .+ ..++.=..+...+...
T Consensus 591 ~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~---LG-~~pv~L~~~~~~~~~~ 666 (1158)
T 3ei3_A 591 SFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT---LG-TQPTVLRTFRSLSTTN 666 (1158)
T ss_dssp TCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEE---CC-SSCCEEEEEESSSCEE
T ss_pred CCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEE---cC-CCceEEEEEeeCCcee
Confidence 76665443321 2234444443 234578889999987665543 44332211000 01 1233222222223223
Q ss_pred EEEEcCCCcEEEEecCCeEEEEeeCCcccCCcE-EEEEECCC--CCEEEEEeCCCeEEEEEcCCCe--eEEeccccCCCe
Q 010362 412 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDF-VAACVSPK--GEWIYCVGEDRNLYCFSHQSGK--LEHLMKVHEKDV 486 (512)
Q Consensus 412 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~--g~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h~~~v 486 (512)
+++++ +....++..++.....-... ..+ ....|+.. ..-++..+ ++.++|..+.+-. .+..++ -...+
T Consensus 667 V~a~s-~rp~liy~~~~~l~~s~l~~----~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tp 739 (1158)
T 3ei3_A 667 VFACS-DRPTVIYSSNHKLVFSNVNL----KEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESP 739 (1158)
T ss_dssp EEEES-SSCEEEEESSSSEEEEEBSS----SCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEE
T ss_pred EEEEC-CCCEEEEEcCCceEEeccCh----HHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCc
Confidence 33333 44444444444322111111 112 23334332 23344444 4558888775432 223333 24578
Q ss_pred EEEEEcCCCCeEEEEE
Q 010362 487 IGVTHHPHRNLLATYG 502 (512)
Q Consensus 487 ~~v~~~p~~~~l~s~~ 502 (512)
..++++|..+.++.+.
T Consensus 740 rri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 740 RKICYQEVSQCFGVLS 755 (1158)
T ss_dssp EEEEEEGGGTEEEEEE
T ss_pred eEEEEcCCCCEEEEEE
Confidence 8999999887666554
No 331
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.35 E-value=0.02 Score=53.13 Aligned_cols=151 Identities=17% Similarity=0.242 Sum_probs=99.9
Q ss_pred ecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCC----ccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee-------
Q 010362 315 SRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH----SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL------- 383 (512)
Q Consensus 315 ~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~------- 383 (512)
..+|..++++- ++.||..++......+.++.. -..|..+..+|+|++|+..+. ..|.|-.+..+...
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 34666666665 578888887655444444432 225788999999999988875 47999888733211
Q ss_pred -----eecCCCCCCCCCCceeEEEEEcCCCC--CeEEEEcCCCcEEEEecCC---eEEEEeeCC------cccCCcEEEE
Q 010362 384 -----QTFKPPPPLRGGDASVNSVHLFPKNP--DHIVVCNKTSSIYIMTLQG---QVVKSFSSG------KREGGDFVAA 447 (512)
Q Consensus 384 -----~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~~~~~~~~i~~~~~~~---~~~~~~~~~------~~~~~~~~~~ 447 (512)
..+...........+|..+.|+|.+. ..+++-..|+.|++||+.. .+. .+... ......+.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 11111111111357899999999864 4899999999999999983 222 12111 1112568899
Q ss_pred EECCCCCEEEEEe--CCCeEEEE
Q 010362 448 CVSPKGEWIYCVG--EDRNLYCF 468 (512)
Q Consensus 448 ~~s~~g~~l~~g~--~dg~i~iw 468 (512)
||+++|-.|++.+ .+|.|+-.
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEEE
Confidence 9999998888866 88988765
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.33 E-value=0.088 Score=47.77 Aligned_cols=233 Identities=9% Similarity=0.033 Sum_probs=112.9
Q ss_pred EEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC----CC-------eEEEEEccCC
Q 010362 227 FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ----DG-------KIKVWRIRSG 295 (512)
Q Consensus 227 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----dg-------~i~vwd~~~~ 295 (512)
+++.|+. .+..||..+++-.. .... .........+...++.+++.|+. ++ .+.+||..++
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~------~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 88 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALA------EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS 88 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEEC------TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT
T ss_pred hhhcccc--ceEEECCCCCceec-ccCC------ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC
Confidence 3444443 47889988776433 1110 00111122233456778888873 12 2778888777
Q ss_pred eeeEEeccccccCeEEEEEecCCCEEEEEeCC-------CcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeC
Q 010362 296 QCLRRLERAHSEGVTSLVFSRDGSQILSTSFD-------STARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASS 368 (512)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 368 (512)
+-...-.......-.+++.. ++..++.|+.+ ..+.+||..+.+-...-..........+...++..++.|+.
T Consensus 89 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 89 EWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp EEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCE
T ss_pred cEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCC
Confidence 64332111111111222222 56777777754 35788898766433221111111111111235666666653
Q ss_pred ------CCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCC-----CcEEEEecCCeEEEEeeCC
Q 010362 369 ------DCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKT-----SSIYIMTLQGQVVKSFSSG 437 (512)
Q Consensus 369 ------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~~~ 437 (512)
-..+.+||+.+.+-...-..+..... . ++... +..+++.|+.+ ..+.+||............
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~----~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 240 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM----F-GVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF 240 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCSSCCBS----C-EEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCCCCccc----c-eEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCC
Confidence 23589999987653332211111111 1 12222 23666666543 3467888876655554433
Q ss_pred cccCCcEEEEEECCCCCEEEEEeCC--------------CeEEEEEcCCCeeEEe
Q 010362 438 KREGGDFVAACVSPKGEWIYCVGED--------------RNLYCFSHQSGKLEHL 478 (512)
Q Consensus 438 ~~~~~~~~~~~~s~~g~~l~~g~~d--------------g~i~iwd~~~~~~~~~ 478 (512)
....... .+ ...+++.++.|+.+ ..+.+||..+.+-...
T Consensus 241 p~~r~~~-~~-~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 241 PQERSSI-SL-VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp SSCCBSC-EE-EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCcccce-EE-EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 2211111 22 22356777777643 3588889887664433
No 333
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.29 E-value=0.089 Score=46.94 Aligned_cols=238 Identities=11% Similarity=0.137 Sum_probs=141.5
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC-e
Q 010362 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG-Q 296 (512)
Q Consensus 218 ~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~-~ 296 (512)
+.-.+|..+.+|.=. ..++.|+|+++.+...... ....|.-=.|-.+. .|+..+ +..|.-|++... .
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~---------~~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~ 138 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT---------MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ 138 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE---------CSSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhccee---------cCCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCC
Confidence 345689888888766 6899999999988776544 34577777787654 455444 458999999753 4
Q ss_pred eeEEecccc----ccCeEEEEEecCCCEEEEEeC-------CCcEEEEeCCCCceeEEeeCCccceeEEEEcC--CC-CE
Q 010362 297 CLRRLERAH----SEGVTSLVFSRDGSQILSTSF-------DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN--DG-SR 362 (512)
Q Consensus 297 ~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~-~~ 362 (512)
+.+.+. .| ...|.....+++.++++..+- .|.+.+|..+ .+.-..+.+|...-..+.... .. +.
T Consensus 139 P~kvFd-R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~l 216 (365)
T 2xzh_A 139 PVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTL 216 (365)
T ss_dssp CEEEEE-CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEECCSEEEEEEECCTTCSSCEEE
T ss_pred Cceeee-cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec-ccccceeeeeeeeeEEEecCCCCCCceE
Confidence 444444 22 345777777888888765542 3778899974 455667777765443333221 11 13
Q ss_pred EEEEeC---CCcEEEEeCCCC---ce-----eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEE
Q 010362 363 VVTASS---DCTVKVWDLKST---DC-----LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 431 (512)
Q Consensus 363 l~~~~~---dg~i~iwd~~~~---~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 431 (512)
++.+.. .+.++|-++... .. ...+..++ .....-..++..++.. ..+..-+.-|.+++||+.....
T Consensus 217 f~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fpp--ea~~DFPVamqvs~ky-gviyviTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 217 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP--EAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTC 293 (365)
T ss_dssp EEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCT--TCTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCc--cccCCceEEEEecccC-CEEEEEeCCcEEEEEEcccCcE
Confidence 333322 258899988542 10 11111111 1223344566777665 7899999999999999995433
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~ 474 (512)
-...... ...+...+.+.+..-+++....|.|.-..++...
T Consensus 294 i~~nrIS--~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 294 IYMNRIS--GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEEECC--SSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred EEEeccC--CCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 2222211 2234444444444445555566666655555443
No 334
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.28 E-value=0.036 Score=51.41 Aligned_cols=147 Identities=16% Similarity=0.239 Sum_probs=94.8
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCCe-----
Q 010362 222 SPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQ----- 296 (512)
Q Consensus 222 s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~----- 296 (512)
..+|..++.+- ++.||.-++..+..-+.+..+.. -.-..|..+..+|+|++||..+ +..|.|-.+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~----i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRH----LVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTT----CCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCC
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcc----cccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcc
Confidence 34666666655 57888878764321111111000 0112577899999999999986 5589999887332
Q ss_pred -------eeEEeccc-----cccCeEEEEEec---CCCEEEEEeCCCcEEEEeCCCC--ceeEEee---------CCccc
Q 010362 297 -------CLRRLERA-----HSEGVTSLVFSR---DGSQILSTSFDSTARIHGLKSG--KLLKEFR---------GHSSY 350 (512)
Q Consensus 297 -------~~~~~~~~-----~~~~i~~~~~~~---~~~~l~~~~~dg~v~i~d~~~~--~~~~~~~---------~~~~~ 350 (512)
..+.+..+ ...+|..+.||| .+..|++-..|+.|++||+... ++. .++ .....
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVND 181 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCC
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccce
Confidence 11222211 246799999999 4678999999999999999752 222 222 12256
Q ss_pred eeEEEEcCCCCEEEEEe--CCCcEEEE
Q 010362 351 VNDAIFTNDGSRVVTAS--SDCTVKVW 375 (512)
Q Consensus 351 v~~~~~~~~~~~l~~~~--~dg~i~iw 375 (512)
|.+++|.+++-.|...+ .+|-|+-.
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 88999999887777655 77777543
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.24 E-value=0.25 Score=51.07 Aligned_cols=267 Identities=13% Similarity=0.163 Sum_probs=153.5
Q ss_pred cCceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEc
Q 010362 213 KSHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRI 292 (512)
Q Consensus 213 ~~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~ 292 (512)
...|.|+.-..+|.+ -.|+.+| +..||-..-+.... . . ......|.++.-..+| .|..|+.+| +..||.
T Consensus 21 ~n~V~~I~qD~~G~l-WigT~~G-L~ryDG~~~~~~~~---~--~--~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~ 89 (758)
T 3ott_A 21 ASVVSCFLQDSEGLI-WIGSNKG-LFSYDGYSTQQHFT---Y--G--ENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNY 89 (758)
T ss_dssp CCCEEEEEECTTSCE-EEEESSC-EEEECSSCEEECSC---T--T--STTSSCEEEEEEETTT-EEEEEETTE-EEEEET
T ss_pred cceEEEEEECCCCCE-EEEECCC-ccccCCCceEEEEc---c--C--CCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeC
Confidence 456999999888854 4566677 56676322111110 0 0 0134568888877766 566666555 789998
Q ss_pred cCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee-----CCccceeEEEEcCCCCEEEEEe
Q 010362 293 RSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR-----GHSSYVNDAIFTNDGSRVVTAS 367 (512)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~ 367 (512)
.+++.... .......|.++.. .++ .|..++.+ .+..+|..+++.. .+. .....|.++....+|...+ ++
T Consensus 90 ~~~~f~~~-~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt 163 (758)
T 3ott_A 90 RADRYEQP-ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GT 163 (758)
T ss_dssp TTTEECCC-SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EE
T ss_pred CCCEEECc-ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-Ee
Confidence 87654321 1112335777654 344 56667765 6888998765543 231 1234588888887777554 55
Q ss_pred CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEE
Q 010362 368 SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAA 447 (512)
Q Consensus 368 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (512)
.+ -+..+|..+++... +..+.........|.++...+.+ ..+.+++. +.+..++........+... ....+.++
T Consensus 164 ~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~~~~~~~~~~l--~~~~i~~i 237 (758)
T 3ott_A 164 YN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTR-QCVWIGTE-GYLFQYFPSTGQIKQTEAF--HNNSIKSL 237 (758)
T ss_dssp TT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTT-TEEEEEEE-EEEEEEETTTTEEEEEEEE--EEEEEEEE
T ss_pred CC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCC-CEEEEEEC-CCCeEEcCCCCeEEeccCC--CCCeEEEE
Confidence 54 47788877655322 22111111123347777776654 44444553 4577888765444333211 12347788
Q ss_pred EECCCCCEEEEEeCCCeEEEEEcCCCeeEEecc-------ccCCCeEEEEEcCCCCeEEEEECCC
Q 010362 448 CVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK-------VHEKDVIGVTHHPHRNLLATYGEDC 505 (512)
Q Consensus 448 ~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~~~dg 505 (512)
+...+|.+.+ |+. +-+.+++..+++...... -....|.++....++.+.+ |+..|
T Consensus 238 ~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G 299 (758)
T 3ott_A 238 ALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG 299 (758)
T ss_dssp EECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS
T ss_pred EEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc
Confidence 8888887554 444 458888887765432211 1234688998887777655 44456
No 336
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.23 E-value=0.13 Score=47.82 Aligned_cols=238 Identities=10% Similarity=0.124 Sum_probs=145.7
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC-e
Q 010362 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG-Q 296 (512)
Q Consensus 218 ~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~-~ 296 (512)
+.-.+|..+.+|.=. ..++.|+|+++........ ....|.-=.|-.+. .|+..+ +..|+-|++... .
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~---------~~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~ 137 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT---------MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ 137 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEE---------CSSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhccee---------cCCCceEEEecCCC-eEEEEc-CCeeEEecccCCCC
Confidence 455788888888765 7899999999987766544 23566666776554 455444 568999999753 3
Q ss_pred eeEEecccc----ccCeEEEEEecCCCEEEEEeC-------CCcEEEEeCCCCceeEEeeCCccceeEEEEcCCC---CE
Q 010362 297 CLRRLERAH----SEGVTSLVFSRDGSQILSTSF-------DSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG---SR 362 (512)
Q Consensus 297 ~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~---~~ 362 (512)
+++.+. .| ...|.....+++.++++..+- .|.+.+|..+ .+.-..+.+|......+....+. ..
T Consensus 138 P~kvFd-R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~l 215 (494)
T 1bpo_A 138 PVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTL 215 (494)
T ss_dssp CEEEEE-CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEEEECTTCSSEEEE
T ss_pred chhhee-cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEEEecCCCCCCceE
Confidence 444444 22 345777778888888775432 4778899985 44556677887655444433211 23
Q ss_pred EEEEeC---CCcEEEEeCCCC---c-----eeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEE
Q 010362 363 VVTASS---DCTVKVWDLKST---D-----CLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVV 431 (512)
Q Consensus 363 l~~~~~---dg~i~iwd~~~~---~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 431 (512)
++.+.. .+.++|-++... . ....+..+ ......-..++..++.. ..+..-+.-|.+++||+.....
T Consensus 216 f~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fp--pe~~~DFPvamqvs~ky-gviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP--PEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCC--TTSTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCC--cccccCceeEEEecccC-CEEEEEecCceEEEEeccccee
Confidence 333433 278999988543 1 11111111 12233445567777766 7899999999999999995433
Q ss_pred EEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe
Q 010362 432 KSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~ 474 (512)
-...... ...+...+......-+++....|.|.--.+....
T Consensus 293 i~~nrIs--~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 293 IYMNRIS--GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEEEECC--SSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred eeeeccc--CCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 3222221 2334444444455555566677777666665544
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.15 E-value=0.3 Score=50.40 Aligned_cols=276 Identities=8% Similarity=0.081 Sum_probs=154.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccC
Q 010362 215 HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS 294 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~ 294 (512)
.|.++...+++..|..|+. +-+..+|..+++..... .+ ....|.++...++|.+.+ |+. +-+.+++..+
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~------~l--~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~ 260 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTE------AF--HNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDT 260 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEE------EE--EEEEEEEEEECTTCCEEE-EET-TEEEEECCTT
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEecc------CC--CCCeEEEEEEcCCCCEEE-EeC-CceeEEecCC
Confidence 4888888887776666664 45888887766543211 11 234688888888776544 454 4588888776
Q ss_pred CeeeEEecc------ccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee-------CCccceeEEEEcCCCC
Q 010362 295 GQCLRRLER------AHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR-------GHSSYVNDAIFTNDGS 361 (512)
Q Consensus 295 ~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~ 361 (512)
+........ -....|.++....+|. |-.|+..| +.++.. .. ....+. .....|.++.-..+|.
T Consensus 261 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~-~~-~~~~~~~~~~~~~~~~~~v~~i~~D~~g~ 336 (758)
T 3ott_A 261 TPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRY-NS-ALQFIPISQITGTGDGNQFYSLFRDSKGF 336 (758)
T ss_dssp SCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECC-CC--CEEEEHHHHSCSCCCCBEEEEEECTTCC
T ss_pred CcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-cccccc-CC-ceeEEecccCCCCCCCceEEEEEEcCCCC
Confidence 653222110 1234588888777775 55566666 555433 22 111111 1134588888888876
Q ss_pred EEEEEeCCCcEEEEeCCCCce--eeecCCCC-CCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeC--
Q 010362 362 RVVTASSDCTVKVWDLKSTDC--LQTFKPPP-PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSS-- 436 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~-- 436 (512)
. ..|+.+| +..++..++.. ...+.... ...-....|.++...+++ .+.+|+ ++-+..++........+..
T Consensus 337 l-WiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~lWigt-~~GL~~~~~~~~~~~~~~~~~ 411 (758)
T 3ott_A 337 Y-WFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQ--QLWIAT-DGSINRYDYATRQFIHYNIVD 411 (758)
T ss_dssp E-EEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTS--CEEEEE-TTEEEEEETTTTEEEEEEEEC
T ss_pred E-EEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCC--CEEEEe-CCcHhhcCcCCCcEEEeecCC
Confidence 4 4455555 66777654321 11121111 001123457777766554 455555 4578889987655544431
Q ss_pred Cc--ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC------CeeE--Eecc---c-cCCCeEEEEEcCCCCeEEE-E
Q 010362 437 GK--REGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS------GKLE--HLMK---V-HEKDVIGVTHHPHRNLLAT-Y 501 (512)
Q Consensus 437 ~~--~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~------~~~~--~~~~---~-h~~~v~~v~~~p~~~~l~s-~ 501 (512)
.. .....+.++...++|+ |..|+..+-+.++|..+ +... ..+. + ....|.++...+++.+.+. +
T Consensus 412 ~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~ 490 (758)
T 3ott_A 412 NTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLY 490 (758)
T ss_dssp CC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEET
T ss_pred CcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEcc
Confidence 11 1234577888777776 55577666788888653 1111 1111 1 1235889999888887763 3
Q ss_pred ECCCeEEEecC
Q 010362 502 GEDCTMKLWKP 512 (512)
Q Consensus 502 ~~dg~i~iW~~ 512 (512)
+.+| |..+||
T Consensus 491 t~~G-l~~~d~ 500 (758)
T 3ott_A 491 NNKG-IDKINP 500 (758)
T ss_dssp TCSS-EEEEET
T ss_pred CCCC-cEEEeC
Confidence 3444 555553
No 338
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.04 E-value=0.015 Score=48.57 Aligned_cols=142 Identities=11% Similarity=0.032 Sum_probs=81.8
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcc--------eeEEEEcCCCCeEEEEeCCC
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDET--------VLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~--------v~~l~~s~~~~~l~s~~~dg 285 (512)
..+.+++|+|+|.+.++ .+|.+.-.+..+.... .+.+.... -.++.|.|+|.+.++ .||
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~---------~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG 107 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND---------NWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKD 107 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC---------CHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETT
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcc---------cccccccEecccccccceEEEECCCCCEEEe--CCC
Confidence 46789999999997777 5787655554332111 11111122 478999999987777 569
Q ss_pred eEEEEEccCCeee------EEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCce------eEEee-CCcccee
Q 010362 286 KIKVWRIRSGQCL------RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKL------LKEFR-GHSSYVN 352 (512)
Q Consensus 286 ~i~vwd~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~------~~~~~-~~~~~v~ 352 (512)
.|.-++-.+.... ..+-...=..+..+.+.|+|.+.++. |+.++-....++.. ...+- ..-..-+
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr 185 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFK 185 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEE
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEE
Confidence 8887765332111 11111112467999999999876666 77765443332211 11111 2222344
Q ss_pred EEEEcCCCCEEEEEeCCCcE
Q 010362 353 DAIFTNDGSRVVTASSDCTV 372 (512)
Q Consensus 353 ~~~~~~~~~~l~~~~~dg~i 372 (512)
.+.|.+++...++. +|.+
T Consensus 186 ~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 186 FLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEEECTTSCEEEEE--TTEE
T ss_pred EEEECCCCcEEEEe--CCeE
Confidence 56788888766555 6633
No 339
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.00 E-value=0.055 Score=49.48 Aligned_cols=156 Identities=13% Similarity=0.077 Sum_probs=86.1
Q ss_pred eeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCC---CCCeEEEEc--CC
Q 010362 344 FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPK---NPDHIVVCN--KT 418 (512)
Q Consensus 344 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~--~~ 418 (512)
+...-.....|+|.|+|..+++--..|.|++++..++........+............++++|+ +..++++-+ .+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3333445789999999987666555899999987655532211111122234567889999996 323333322 34
Q ss_pred CcEEEEecCC---------eEEEEee-CCcccCCcEEEEEECCCCCEEEEEeC-------------CCeEEEEEcCCCe-
Q 010362 419 SSIYIMTLQG---------QVVKSFS-SGKREGGDFVAACVSPKGEWIYCVGE-------------DRNLYCFSHQSGK- 474 (512)
Q Consensus 419 ~~i~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~s~~g~~l~~g~~-------------dg~i~iwd~~~~~- 474 (512)
+.|.-+...+ .....+. ...........+.|.|||.+.++.+. .|.|.-.+....-
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 5566665543 1111111 11111223457999999987766542 3455555543210
Q ss_pred ------eEEec-cccCCCeEEEEEcCCCCeEEE
Q 010362 475 ------LEHLM-KVHEKDVIGVTHHPHRNLLAT 500 (512)
Q Consensus 475 ------~~~~~-~~h~~~v~~v~~~p~~~~l~s 500 (512)
-...+ .+|. ....++|+|++.++++
T Consensus 187 ~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 187 PGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp TTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred CCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 00111 1343 4568999998876654
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.99 E-value=0.19 Score=45.15 Aligned_cols=197 Identities=7% Similarity=0.034 Sum_probs=108.6
Q ss_pred cCCCCeEEEEeC--CCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCC--------------CcEEEEeC
Q 010362 272 SRDSEMLASGSQ--DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD--------------STARIHGL 335 (512)
Q Consensus 272 s~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~v~i~d~ 335 (512)
++++.++..... ++.|...+.+ |.....+. . .. +--+++++.+|+.+... ..|+..++
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~-~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID-GSNIHKLS-N--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT-SCSCEEEE-E--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC-CCCCEEcc-C--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 346666666642 4566666654 33344443 1 11 23457889988877643 36777787
Q ss_pred CCCceeEEeeCCccceeEEEEcCCCCEEEEEe----CCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 336 KSGKLLKEFRGHSSYVNDAIFTNDGSRVVTAS----SDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 336 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
..++... +.... +..|++++++|+-.. .+..|..-++.... ...+.... + ..++|.+..+
T Consensus 96 dg~~~~~-l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~--------~--~~~~~~g~~i 159 (302)
T 3s25_A 96 NGHGSTV-LDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHY--------L--FTCNTSDRYF 159 (302)
T ss_dssp TSCCCEE-EECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSC--------C--CCSEEETTEE
T ss_pred CCCcceE-eecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCC--------c--eEeeEECCEE
Confidence 6654332 32211 236778888888765 23445555665433 22222111 1 2345666555
Q ss_pred EEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCC--CeEEEEEcCCCeeEEeccccCCCeEEE
Q 010362 412 IVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGED--RNLYCFSHQSGKLEHLMKVHEKDVIGV 489 (512)
Q Consensus 412 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d--g~i~iwd~~~~~~~~~~~~h~~~v~~v 489 (512)
+.+......|+..++.+...+.+.... .. ..++|++.+|+-...+ ..|..-++..+... .+.. ..+ .
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~~~-----~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~-~Lt~--~~~--~ 228 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYDCN-----CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPV-VLTE--ANI--E 228 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEECSC-----EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCE-ECSC--SCE--E
T ss_pred EEEeCCCceEEEEECCCCCEEEEeCCC-----cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeE-EEeC--CCc--c
Confidence 556555788999999876655554321 22 2356999998877643 36777676654432 3321 222 2
Q ss_pred EEcCCCCeEEEE
Q 010362 490 THHPHRNLLATY 501 (512)
Q Consensus 490 ~~~p~~~~l~s~ 501 (512)
.|+|++.+|.-+
T Consensus 229 ~~~~~g~~Iy~~ 240 (302)
T 3s25_A 229 HYNVYGSLIFYQ 240 (302)
T ss_dssp EEEEETTEEEEE
T ss_pred eEEECCCEEEEE
Confidence 355556555543
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.88 E-value=0.27 Score=45.35 Aligned_cols=240 Identities=8% Similarity=0.001 Sum_probs=111.3
Q ss_pred CCCEEEEEeC-CCeEEEEEcCC--CeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeC-C---------CeEEEE
Q 010362 224 DGQFLVSCSF-DGFIEVWDYLS--GKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQ-D---------GKIKVW 290 (512)
Q Consensus 224 ~~~~l~sg~~-dg~i~iwd~~~--~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-d---------g~i~vw 290 (512)
++.+++.|+. ...+.+||..+ .+-...-... .. ....-.++.+ ++.+++.|+. + ..+.+|
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p-~~----~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~y 91 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFP-GG----PRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKY 91 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCT-TC----CCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCC-CC----cCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEE
Confidence 6666677764 34688888864 2222111110 00 1111112222 5677777765 2 468899
Q ss_pred EccCCeeeEEeccc-cccCeEEEEEecCCCEEEEEeCC---------------------------------------CcE
Q 010362 291 RIRSGQCLRRLERA-HSEGVTSLVFSRDGSQILSTSFD---------------------------------------STA 330 (512)
Q Consensus 291 d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d---------------------------------------g~v 330 (512)
|+.+.+-...-... ....-.+++. .+++.++.|+.+ ..+
T Consensus 92 d~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (357)
T 2uvk_A 92 NPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL 170 (357)
T ss_dssp ETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEE
T ss_pred eCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccE
Confidence 99887643322111 1111122222 467778888764 478
Q ss_pred EEEeCCCCceeEE--eeCCccceeEEEEcCCCCEEEEEeC------CCcEEEEeC--CCCceeeecCCCCCCCCCCceeE
Q 010362 331 RIHGLKSGKLLKE--FRGHSSYVNDAIFTNDGSRVVTASS------DCTVKVWDL--KSTDCLQTFKPPPPLRGGDASVN 400 (512)
Q Consensus 331 ~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~i~ 400 (512)
.+||+.+.+-... +......-.+++.. ++..++.|+. ...+.+||+ .+.+-.. +........ ... .
T Consensus 171 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~-~~~~~~~~~-~~~-~ 246 (357)
T 2uvk_A 171 LSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK-LAPVSSPDG-VAG-G 246 (357)
T ss_dssp EEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEE-CCCSSTTTC-CBS-C
T ss_pred EEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEe-cCCCCCCcc-ccc-c
Confidence 8999877643322 21111110222222 4556666653 235777876 3332211 111110000 011 1
Q ss_pred EEEEcCCCCCeEEEEcCC----------------------CcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCCEEEE
Q 010362 401 SVHLFPKNPDHIVVCNKT----------------------SSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC 458 (512)
Q Consensus 401 ~~~~~~~~~~~l~~~~~~----------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 458 (512)
++... +..+++.|+.+ ..+.+||.................. ..+...+++.++.
T Consensus 247 ~~~~~--~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~ 322 (357)
T 2uvk_A 247 FAGIS--NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLII 322 (357)
T ss_dssp EEEEE--TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEE
T ss_pred eEEEE--CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEE
Confidence 12221 22566666532 2477888875443333222211111 1223347788888
Q ss_pred EeCCC------eEEEEEcCCCeeEEec
Q 010362 459 VGEDR------NLYCFSHQSGKLEHLM 479 (512)
Q Consensus 459 g~~dg------~i~iwd~~~~~~~~~~ 479 (512)
|+.++ .|.++++++++.+...
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 88543 4666788887766544
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.88 E-value=0.14 Score=49.07 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=63.6
Q ss_pred cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCC--CCCCceeEEEEEcCC---CCCeEEEEcC------
Q 010362 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL--RGGDASVNSVHLFPK---NPDHIVVCNK------ 417 (512)
Q Consensus 349 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~---~~~~l~~~~~------ 417 (512)
.....|+|.|+|+++++-...+.|++++..++............ .........++++|+ +..++++.+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 35679999999986666544457888886655432211111111 123456789999996 5344444432
Q ss_pred ------CCcEEEEecCC---e--EEEEee--CCcccCCcEEEEEECCCCCEEEEEeC
Q 010362 418 ------TSSIYIMTLQG---Q--VVKSFS--SGKREGGDFVAACVSPKGEWIYCVGE 461 (512)
Q Consensus 418 ------~~~i~~~~~~~---~--~~~~~~--~~~~~~~~~~~~~~s~~g~~l~~g~~ 461 (512)
...|.-++... . ....+. ...........++|.|||.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 23566665532 1 111111 11112345789999999987776553
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.82 E-value=0.051 Score=50.35 Aligned_cols=222 Identities=10% Similarity=0.064 Sum_probs=103.7
Q ss_pred CCCeEEEEeCC-CeEEEEEccC--CeeeEEecc-c-cccCeEEEEEecCCCEEEEEeC-C---------CcEEEEeCCCC
Q 010362 274 DSEMLASGSQD-GKIKVWRIRS--GQCLRRLER-A-HSEGVTSLVFSRDGSQILSTSF-D---------STARIHGLKSG 338 (512)
Q Consensus 274 ~~~~l~s~~~d-g~i~vwd~~~--~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~-d---------g~v~i~d~~~~ 338 (512)
++.+++.|+.+ ..+.+||+.+ .+- ..+.. . ....-.+++. -++..++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W-~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKW-TALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCE-EECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCe-eECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666666543 4688888864 322 22211 1 1111112222 25667777765 2 46889998776
Q ss_pred ceeEEeeCC-ccceeEEEEcCCCCEEEEEeCC---------------------------------------CcEEEEeCC
Q 010362 339 KLLKEFRGH-SSYVNDAIFTNDGSRVVTASSD---------------------------------------CTVKVWDLK 378 (512)
Q Consensus 339 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~iwd~~ 378 (512)
+-...-... .......+...+++.++.|+.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 432211111 1111111222466777777754 468899988
Q ss_pred CCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcC------CCcEEEEec--CCeEEEEeeCCcccCCcEEEEEEC
Q 010362 379 STDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNK------TSSIYIMTL--QGQVVKSFSSGKREGGDFVAACVS 450 (512)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s 450 (512)
+.+-...-..+..... -.++... +..+++.|+. ...+..+|+ .....................+..
T Consensus 177 ~~~W~~~~~~p~~~~~----~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~ 250 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTA----GAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI 250 (357)
T ss_dssp TTEEEEEEECSSCCCB----SCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE
T ss_pred CCcEEECCCCCCCCcc----cccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE
Confidence 7653332111111011 0122222 2256666553 345777876 444444433222111111122333
Q ss_pred CCCCEEEEEeCC----------------------CeEEEEEcCCCee--EEeccccCCCeEEEEEcCCCCeEEEEECCC
Q 010362 451 PKGEWIYCVGED----------------------RNLYCFSHQSGKL--EHLMKVHEKDVIGVTHHPHRNLLATYGEDC 505 (512)
Q Consensus 451 ~~g~~l~~g~~d----------------------g~i~iwd~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg 505 (512)
.+++.++.|+.+ ..+.+||..+.+- +..+......-.++. .++.+++.||.++
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLIIGGETA 327 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEEEEEECG
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEEEeeeCC
Confidence 466777777632 2578899887643 233332222222333 3677888888553
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.78 E-value=0.1 Score=53.17 Aligned_cols=203 Identities=9% Similarity=0.038 Sum_probs=105.0
Q ss_pred CCCCeEEEEeCC----CeEEEEEccCCeeeEEe-c-----cccccCeEEEEEec-CCCEEEEEeCC------CcEEEEeC
Q 010362 273 RDSEMLASGSQD----GKIKVWRIRSGQCLRRL-E-----RAHSEGVTSLVFSR-DGSQILSTSFD------STARIHGL 335 (512)
Q Consensus 273 ~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~-~-----~~~~~~i~~~~~~~-~~~~l~~~~~d------g~v~i~d~ 335 (512)
.++.+++.|+.+ ..+.+||..+++....- . ......-.+++..+ ++..++.|+.+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 46888998887643322 1 01111123333343 67777787754 35788998
Q ss_pred CCCceeEEeeCCccc-eeEEEEcCCCCEEEEEeCCC--cEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeE
Q 010362 336 KSGKLLKEFRGHSSY-VNDAIFTNDGSRVVTASSDC--TVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHI 412 (512)
Q Consensus 336 ~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 412 (512)
.+.+-...-...... -.+++...++..++.|+.++ .+.+||..+..-... ..............++.+......++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~-~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV-TPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC-CCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc-cCCCCCCCcccceeEEEEeCCCCEEE
Confidence 775432211111111 11223324778888887654 689999987653222 11000011111122234444433567
Q ss_pred EEEcC-------CCcEEEEecCCeE------EEEeeCCcccCCcEEEEEECCCCCEEEEEeC--------CCeEEEEEcC
Q 010362 413 VVCNK-------TSSIYIMTLQGQV------VKSFSSGKREGGDFVAACVSPKGEWIYCVGE--------DRNLYCFSHQ 471 (512)
Q Consensus 413 ~~~~~-------~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~--------dg~i~iwd~~ 471 (512)
+.|+. ...+..||+.... .............-..++...+++.++.|+. ...+.+||..
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 77765 2458889987544 3332221111111123333334777777774 3459999998
Q ss_pred CCeeE
Q 010362 472 SGKLE 476 (512)
Q Consensus 472 ~~~~~ 476 (512)
+.+-.
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 87654
No 345
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.67 E-value=0.019 Score=47.98 Aligned_cols=179 Identities=13% Similarity=0.051 Sum_probs=93.1
Q ss_pred CCeEEEEeCCCeEEEEEccCCe------eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCcee------E
Q 010362 275 SEMLASGSQDGKIKVWRIRSGQ------CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLL------K 342 (512)
Q Consensus 275 ~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~------~ 342 (512)
..+|++...| +++.=...++. ...++-.+.=..+..++|+|+|.+.++ .+|.++-.+..+.... .
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3456666666 55544433333 122222111246789999999886666 6788777776542221 1
Q ss_pred Eee--CCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCC-CCCCCCCCceeEEEEEcCCCCCeEEEEcCCC
Q 010362 343 EFR--GHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP-PPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419 (512)
Q Consensus 343 ~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~ 419 (512)
.+- +.+. -.++.|.|+|.+.++ .||.|.-++..+.....-+.. ...-...=..+..+.+.|++ .+.++. ++
T Consensus 81 ~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg 154 (236)
T 1tl2_A 81 KIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQ 154 (236)
T ss_dssp EEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TT
T ss_pred Eeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CC
Confidence 110 1111 478999999987777 569888777543211111000 00000111466888888887 555544 66
Q ss_pred cEEEEecCCe-------EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEE
Q 010362 420 SIYIMTLQGQ-------VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLY 466 (512)
Q Consensus 420 ~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~ 466 (512)
.++-...... ....+... .-.....+.++++|...++. +|.++
T Consensus 155 ~lyr~~~P~~~~~~wl~~~~~~g~~--g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 155 QFYKALPPVSNQDNWLARATKIGQG--GWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp EEEEECCCSSTTCCHHHHCEEEESS--SGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred cEEecCCCCCCCcccccccceeccC--CcceEEEEEECCCCcEEEEe--CCeEE
Confidence 6543322211 00111101 11234556688888776665 66544
No 346
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.63 E-value=0.076 Score=49.05 Aligned_cols=144 Identities=14% Similarity=0.143 Sum_probs=81.3
Q ss_pred cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-eeeecCCCCCCCCCCceeEEEEEcCC---CCCeEEEEcC---C---
Q 010362 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTD-CLQTFKPPPPLRGGDASVNSVHLFPK---NPDHIVVCNK---T--- 418 (512)
Q Consensus 349 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~---~--- 418 (512)
.....++|.|+|+ |+++..+|.|+++|. +++ .+..+. ...........++++|+ +..++++... +
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~---v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFD---VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccc---eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 4578899999997 555566799999973 443 222221 11122356789999997 4344444432 3
Q ss_pred -CcEEEEecCCe-----EEE----EeeCCcccCCcEEEEEECCCCCEEEEEeC-------------CCeEEEEEcCCCee
Q 010362 419 -SSIYIMTLQGQ-----VVK----SFSSGKREGGDFVAACVSPKGEWIYCVGE-------------DRNLYCFSHQSGKL 475 (512)
Q Consensus 419 -~~i~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~s~~g~~l~~g~~-------------dg~i~iwd~~~~~~ 475 (512)
..|..++..+. ... .+.... ......++|.|||.+.++.+. .|.|.-++.. ++.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~--~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~ 180 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAY--IHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRP 180 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCS--SCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCC--CcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCC
Confidence 56777776643 111 122111 122457999999986666442 2456666653 220
Q ss_pred --------EEec-cccCCCeEEEEEcC-CCCeEEEE
Q 010362 476 --------EHLM-KVHEKDVIGVTHHP-HRNLLATY 501 (512)
Q Consensus 476 --------~~~~-~~h~~~v~~v~~~p-~~~~l~s~ 501 (512)
...+ .++ .....++|+| ++.++++-
T Consensus 181 p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 181 PADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEE
T ss_pred CCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEe
Confidence 1111 123 3456899999 66655543
No 347
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.38 E-value=0.26 Score=53.11 Aligned_cols=240 Identities=11% Similarity=0.132 Sum_probs=134.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC-e
Q 010362 218 CARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG-Q 296 (512)
Q Consensus 218 ~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~-~ 296 (512)
+.-.+|..+.+|.=. ..++.|+|+++........ ...+|.-=.|-.+.. |+..+ +..|.-|++... .
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~---------~~e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~ 137 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT---------MTDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQ 137 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhcccc---------cCCCceEEEecCCCe-eEEEc-CCeEEEeccCCCCc
Confidence 345678888777665 6799999998877665544 334666667765544 44443 458999999643 3
Q ss_pred eeEEecccc----ccCeEEEEEecCCCEEEEEe-------CCCcEEEEeCCCCceeEEeeCCccceeEEEEc--CC-CCE
Q 010362 297 CLRRLERAH----SEGVTSLVFSRDGSQILSTS-------FDSTARIHGLKSGKLLKEFRGHSSYVNDAIFT--ND-GSR 362 (512)
Q Consensus 297 ~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~-------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~-~~~ 362 (512)
+++.+. .| ...|..-..+++.++++..+ ..|.+.+|..+. +....+.||......+... +. ...
T Consensus 138 P~k~fd-R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l 215 (1630)
T 1xi4_A 138 PVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTL 215 (1630)
T ss_pred cHHHHh-cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceE
Confidence 333332 22 45677777888888877544 347888998753 3444556665544333332 11 122
Q ss_pred EEEEeC---CCcEEEEeCCCC-ceeeecCC-----CCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEE
Q 010362 363 VVTASS---DCTVKVWDLKST-DCLQTFKP-----PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKS 433 (512)
Q Consensus 363 l~~~~~---dg~i~iwd~~~~-~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~ 433 (512)
+..+.. .+.++|-++... .....+.. ..+......-..++..++.. .++..-+.-|.++++|+.......
T Consensus 216 ~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc-CEEEEEecCceEEEEecccchhhh
Confidence 222222 368899888543 11111110 00111122334466667665 788889999999999998543322
Q ss_pred eeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCe
Q 010362 434 FSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGK 474 (512)
Q Consensus 434 ~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~ 474 (512)
.... ...++...+......-+++....|.|.-..+....
T Consensus 295 ~~ri--s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 295 MNRI--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred hccc--cCCceEEeccCCCCCceEEEcCCceEEEEEEccch
Confidence 2111 12234333433333344444566666555555444
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.86 E-value=1.2 Score=41.69 Aligned_cols=273 Identities=11% Similarity=0.017 Sum_probs=129.3
Q ss_pred CCEEEEEeCCCeEEEEEcCC-CeeeccccccccceeeccCcceeEEEEcC-CCCeEEEEeCCC----eEEEEEccCCeee
Q 010362 225 GQFLVSCSFDGFIEVWDYLS-GKLKKDLQYQADETFMMHDETVLCIEFSR-DSEMLASGSQDG----KIKVWRIRSGQCL 298 (512)
Q Consensus 225 ~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg----~i~vwd~~~~~~~ 298 (512)
...|.+|+..| +.+++... +..-.... . ......|.+|++.| +...+..++..| .|... .+.|+.-
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~-----~-~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW 93 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRG-----P-VFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNW 93 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEE-----E-ESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECC-----c-cCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCc
Confidence 34677777766 55555432 21111110 0 01345799999998 333444444444 33332 2333322
Q ss_pred EEeccc-------------cccCeEEEEEec-C-CCEEEEEeCCCcEEEEeCCCCceeEEeeC-----------------
Q 010362 299 RRLERA-------------HSEGVTSLVFSR-D-GSQILSTSFDSTARIHGLKSGKLLKEFRG----------------- 346 (512)
Q Consensus 299 ~~~~~~-------------~~~~i~~~~~~~-~-~~~l~~~~~dg~v~i~d~~~~~~~~~~~~----------------- 346 (512)
..+... ....|.++++.| + ...+.+++..+.|...+- .++.-..+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g 172 (394)
T 3b7f_A 94 TEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDG 172 (394)
T ss_dssp EECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC---
T ss_pred eECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccC
Confidence 222211 112477888887 2 556777666666655532 3333222211
Q ss_pred --CccceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceeeecCCCCC---CC----CCCceeEEEEEcCCCCCeEEEEc
Q 010362 347 --HSSYVNDAIFTND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPP---LR----GGDASVNSVHLFPKNPDHIVVCN 416 (512)
Q Consensus 347 --~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~~----~~~~~i~~~~~~~~~~~~l~~~~ 416 (512)
....+.++.++|. ...++.+..++.|...+ ..++.-..+..... +. .....+.++.+.|.++..+.++.
T Consensus 173 ~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 173 TPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp -CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 1235778999873 34455555444444432 22322222211000 00 00135888999998767777776
Q ss_pred CCCcEEEEecCCeEEEEeeCCccc--CCcEEEEEECC-CCCEEEEEeC-----------CCeEEEEEcCC-CeeEEec--
Q 010362 417 KTSSIYIMTLQGQVVKSFSSGKRE--GGDFVAACVSP-KGEWIYCVGE-----------DRNLYCFSHQS-GKLEHLM-- 479 (512)
Q Consensus 417 ~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~-~g~~l~~g~~-----------dg~i~iwd~~~-~~~~~~~-- 479 (512)
..+ |+..+-.+.....+...... ...+..++++| +...|+++.. ++...+|...+ |+.-..+
T Consensus 252 ~~g-l~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~ 330 (394)
T 3b7f_A 252 HCG-IYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR 330 (394)
T ss_dssp TTE-EEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECB
T ss_pred CCe-EEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCC
Confidence 544 55555445555444321111 12355777876 3444555532 33345565554 2222211
Q ss_pred --cccCC----CeEEEEEcCC-CCeEEEEECCCeEE
Q 010362 480 --KVHEK----DVIGVTHHPH-RNLLATYGEDCTMK 508 (512)
Q Consensus 480 --~~h~~----~v~~v~~~p~-~~~l~s~~~dg~i~ 508 (512)
..... ....++++|. ...|+.++.++.|.
T Consensus 331 glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 331 GLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp TSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred CCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 11000 1235788874 34466666566554
No 349
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.63 E-value=1.5 Score=41.05 Aligned_cols=270 Identities=9% Similarity=0.037 Sum_probs=127.5
Q ss_pred cCceEEEEECC--CCCEEEEEeCCC----eEEEEEcCCCeeeccccccccceeec--------cCcceeEEEEcCC--CC
Q 010362 213 KSHAECARFSP--DGQFLVSCSFDG----FIEVWDYLSGKLKKDLQYQADETFMM--------HDETVLCIEFSRD--SE 276 (512)
Q Consensus 213 ~~~v~~~~~s~--~~~~l~sg~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~--------h~~~v~~l~~s~~--~~ 276 (512)
...|.++++.| .+.+.+ ++..| .|... .+.++.-..+.... .+.. +...|.++++.|. ..
T Consensus 54 ~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s-~D~G~tW~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 129 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLM-AARTGHLGPTVFRS-DDGGGNWTEATRPP--AFNKAPEGETGRVVDHVFWLTPGHASEPG 129 (394)
T ss_dssp TSEEEEEEECSSSTTCEEE-EEEC--CCEEEEEE-SSTTSCCEECSBCC--CCCCCC----CCCCCEEEEEEECCTTSTT
T ss_pred CCceEEEEECCCCCCeEEE-EecCCCCCccEEEe-CCCCCCceECCccc--cCCCcccccccccccceeEEEeCCCCCCC
Confidence 45699999998 455444 44444 34333 23333211111100 0100 1235888999872 45
Q ss_pred eEEEEeCCCeEEEEEccCCeeeEEecc------------------ccccCeEEEEEecC-CCEEEEEeCCCcEEEEeCCC
Q 010362 277 MLASGSQDGKIKVWRIRSGQCLRRLER------------------AHSEGVTSLVFSRD-GSQILSTSFDSTARIHGLKS 337 (512)
Q Consensus 277 ~l~s~~~dg~i~vwd~~~~~~~~~~~~------------------~~~~~i~~~~~~~~-~~~l~~~~~dg~v~i~d~~~ 337 (512)
.+..++..+.|...+ +.|+.-..+.. .....+.++.+.|. ...++++..++.|...+ ..
T Consensus 130 ~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-Dg 207 (394)
T 3b7f_A 130 TWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DA 207 (394)
T ss_dssp CEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-ST
T ss_pred EEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CC
Confidence 566666566544432 23333222211 01235788999883 45566665555555443 23
Q ss_pred CceeEEeeC-----C--------ccceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEE
Q 010362 338 GKLLKEFRG-----H--------SSYVNDAIFTND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVH 403 (512)
Q Consensus 338 ~~~~~~~~~-----~--------~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~ 403 (512)
++....+.. + ...+.++.++|. ...++.+...+ |...+ ..++.-..+....+ ......+.++.
T Consensus 208 G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~~~l~-~~~~~~~~~i~ 284 (394)
T 3b7f_A 208 GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIGDAMP-REVGDIGFPIV 284 (394)
T ss_dssp TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGGGGSC-TTTCSCEEEEE
T ss_pred CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECCCCCC-CCCccceEEEE
Confidence 333222211 0 124788999885 35676666554 44443 22332222221000 00012356788
Q ss_pred EcCCCCCeEEEEcC-----------CCcEEEEecC--CeEEEEeeCCcccCC-----cEEEEEECCC-CCEEEEEeCCCe
Q 010362 404 LFPKNPDHIVVCNK-----------TSSIYIMTLQ--GQVVKSFSSGKREGG-----DFVAACVSPK-GEWIYCVGEDRN 464 (512)
Q Consensus 404 ~~~~~~~~l~~~~~-----------~~~i~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~s~~-g~~l~~g~~dg~ 464 (512)
+.|..+..+.++.. ++...+|... +.....+........ ....++++|. +..|++++.++.
T Consensus 285 ~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~ 364 (394)
T 3b7f_A 285 VHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGE 364 (394)
T ss_dssp ECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSC
T ss_pred ECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCe
Confidence 88866566665532 2223444433 344443332211111 1135777774 455777776666
Q ss_pred EEEEEcCCCeeEEeccccCCCeEEEEEc
Q 010362 465 LYCFSHQSGKLEHLMKVHEKDVIGVTHH 492 (512)
Q Consensus 465 i~iwd~~~~~~~~~~~~h~~~v~~v~~~ 492 (512)
|+.-+ ..|+--..+..+-..+.+|+|.
T Consensus 365 l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 365 IWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp EEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred EEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 55332 3343333333344457777764
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.62 E-value=1.7 Score=41.89 Aligned_cols=222 Identities=9% Similarity=0.083 Sum_probs=125.0
Q ss_pred CCCEEEEEe-CCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEc--CCCCeEEEEeC-------CCeE------
Q 010362 224 DGQFLVSCS-FDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFS--RDSEMLASGSQ-------DGKI------ 287 (512)
Q Consensus 224 ~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--~~~~~l~s~~~-------dg~i------ 287 (512)
||++|+.-. .+..|-..+++..++...+..+ ....+.+++|- |+..|++.++. ||..
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iP-------n~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~ 213 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVP-------NVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDE 213 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECT-------TCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTST
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCC-------CCcCcccccccccCCccEEEecceeeccCCCCCcccccCCh
Confidence 788888877 5667888888887766555432 44567777775 67777777654 2221
Q ss_pred ---EE---EEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCC----------------------------------
Q 010362 288 ---KV---WRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFD---------------------------------- 327 (512)
Q Consensus 288 ---~v---wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------------------------- 327 (512)
.+ .|..+.+....+. -.+....+...+++.+.++.+.+
T Consensus 214 ~~y~~f~~iD~~tm~v~~Qv~--v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~ 291 (638)
T 3sbq_A 214 NSYTMYNAIDAETMEMAFQVI--VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGD 291 (638)
T ss_dssp TEEEEEEEEETTTCSEEEEEE--ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTC
T ss_pred hhceEEEEEcCCccEEEEEEE--cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCC
Confidence 11 1222333222222 12334445556677777766543
Q ss_pred ----C--cEEEEeCCC----Cce-eEEeeCCccceeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCceeee--c-CCCC--
Q 010362 328 ----S--TARIHGLKS----GKL-LKEFRGHSSYVNDAIFTNDGSRVVTASS-DCTVKVWDLKSTDCLQT--F-KPPP-- 390 (512)
Q Consensus 328 ----g--~v~i~d~~~----~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~--~-~~~~-- 390 (512)
+ .|.+.|.+. +.. ...+. -......+..+|||++++.++. +.++.++|++....... + .+..
T Consensus 292 ~~~~~g~gv~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~ 370 (638)
T 3sbq_A 292 FITLGDSKTPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVI 370 (638)
T ss_dssp CBCCTTCCCCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGE
T ss_pred eEEECCCCeeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccce
Confidence 1 233444433 111 11222 2233557889999999887664 78899999884211000 0 0000
Q ss_pred -CCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCe-----------EEEEeeCCcccCCcEEEEEE------CCC
Q 010362 391 -PLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQ-----------VVKSFSSGKREGGDFVAACV------SPK 452 (512)
Q Consensus 391 -~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~------s~~ 452 (512)
............+|.+++ ....+..-|..|.-|++... .+..+..+. .+-.+.. .||
T Consensus 371 ~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y----qpGH~~~~~get~~~d 445 (638)
T 3sbq_A 371 VGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY----QPGHLHASLCETNEAD 445 (638)
T ss_dssp EECCBCCSCEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS----CEEEEEETTTTSTTCC
T ss_pred EeeccCCCcccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeecccccc----CCcccccCCCccCCCC
Confidence 000123456677888877 66777779999999998632 333333322 1223322 678
Q ss_pred CCEEEEEe
Q 010362 453 GEWIYCVG 460 (512)
Q Consensus 453 g~~l~~g~ 460 (512)
|++|++..
T Consensus 446 Gk~lv~ln 453 (638)
T 3sbq_A 446 GKWLVALS 453 (638)
T ss_dssp SCEEEEEE
T ss_pred ccEEEEec
Confidence 99999886
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.14 E-value=0.9 Score=46.21 Aligned_cols=153 Identities=8% Similarity=0.051 Sum_probs=82.2
Q ss_pred cCCCEEEEEeCC----CcEEEEeCCCCceeEEe-e-----CCcc-ceeEEEEcC-CCCEEEEEeCCC------cEEEEeC
Q 010362 316 RDGSQILSTSFD----STARIHGLKSGKLLKEF-R-----GHSS-YVNDAIFTN-DGSRVVTASSDC------TVKVWDL 377 (512)
Q Consensus 316 ~~~~~l~~~~~d----g~v~i~d~~~~~~~~~~-~-----~~~~-~v~~~~~~~-~~~~l~~~~~dg------~i~iwd~ 377 (512)
.++..++.|+.+ ..+.+||..+++-...- . .... .-.+++..+ ++..++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777653 46888998776543322 1 0111 112233333 667777776532 4788998
Q ss_pred CCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC--cEEEEecCCeEEEEeeC---CcccCCcEEEEEECCC
Q 010362 378 KSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS--SIYIMTLQGQVVKSFSS---GKREGGDFVAACVSPK 452 (512)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~--~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~ 452 (512)
.+.+-...-..+.. . .-.+.+... +..+++.|+.++ .+.+||........... ..........+.+..+
T Consensus 476 ~t~~W~~~~~~p~~----R-~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 476 KTREWSMIKSLSHT----R-FRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp TTTEEEECCCCSBC----C-BSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred CCCcEEECCCCCCC----c-ccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 87543322111111 1 111222222 336777776554 68999998766555543 1111111223444544
Q ss_pred -CCEEEEEeC--C-----CeEEEEEcCCCe
Q 010362 453 -GEWIYCVGE--D-----RNLYCFSHQSGK 474 (512)
Q Consensus 453 -g~~l~~g~~--d-----g~i~iwd~~~~~ 474 (512)
++.++.|+. + +.+.+||+.+..
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 667777765 2 468999998776
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.14 E-value=2.4 Score=40.52 Aligned_cols=245 Identities=9% Similarity=0.052 Sum_probs=118.0
Q ss_pred CceEEEEECCCCC-EEEEEeCCCeEEEEEcCCCeeeccccccccceee----ccCcceeEEEEcCC----CCeEEEEeC-
Q 010362 214 SHAECARFSPDGQ-FLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFM----MHDETVLCIEFSRD----SEMLASGSQ- 283 (512)
Q Consensus 214 ~~v~~~~~s~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~h~~~v~~l~~s~~----~~~l~s~~~- 283 (512)
...+.|+|.|+|+ .|+++...|.|++++.+.......+...+..... ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3467899999996 4555677899999975432111111100000111 12456889999996 433333222
Q ss_pred -C----------CeEEEEEccC----------CeeeEEec-cccccCeEEEEEecCCCEEEEEeCCC-------------
Q 010362 284 -D----------GKIKVWRIRS----------GQCLRRLE-RAHSEGVTSLVFSRDGSQILSTSFDS------------- 328 (512)
Q Consensus 284 -d----------g~i~vwd~~~----------~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg------------- 328 (512)
+ ..|.-|.+.. .+.+..+. .........|.|.|||.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~ 173 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS 173 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence 1 1344465542 12233322 12234568999999998777665432
Q ss_pred ----cEEEEeCCCC--------------------ceeEEeeCCccceeEEEEcCC-----CC-EEEEEeCCC----cEEE
Q 010362 329 ----TARIHGLKSG--------------------KLLKEFRGHSSYVNDAIFTND-----GS-RVVTASSDC----TVKV 374 (512)
Q Consensus 329 ----~v~i~d~~~~--------------------~~~~~~~~~~~~v~~~~~~~~-----~~-~l~~~~~dg----~i~i 374 (512)
.|.-.|.... ....--.+|.+ ...++|+|. |. +++.+...| .-.|
T Consensus 174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei 252 (463)
T 2wg3_C 174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSARI 252 (463)
T ss_dssp SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS-CCBEEEESSCSSTTCSEEEEEECC------CEEE
T ss_pred CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCCeE
Confidence 3444444331 00011124544 557899986 33 444443212 1233
Q ss_pred EeCCCCceeeecCCCCCCCCCC--ceeEEEEEcCCC-----CCeEEEEcCCCcEEEEecCCe----EEEEee-C-----C
Q 010362 375 WDLKSTDCLQTFKPPPPLRGGD--ASVNSVHLFPKN-----PDHIVVCNKTSSIYIMTLQGQ----VVKSFS-S-----G 437 (512)
Q Consensus 375 wd~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~-----~~~l~~~~~~~~i~~~~~~~~----~~~~~~-~-----~ 437 (512)
..+..+.... +..+.....+. ..+..+.+.... ...++++...+.|....+... ....+. . .
T Consensus 253 ~~i~~G~~yG-~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 331 (463)
T 2wg3_C 253 LQIIKGKDYE-SEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCR 331 (463)
T ss_dssp EEEC----CC-SCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSC
T ss_pred eeeccCCCCC-CCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCccccc
Confidence 3333222110 01111111122 466777775321 123555555577766665422 111221 0 0
Q ss_pred cccCCcEEEEEECCCCCEEEEEe
Q 010362 438 KREGGDFVAACVSPKGEWIYCVG 460 (512)
Q Consensus 438 ~~~~~~~~~~~~s~~g~~l~~g~ 460 (512)
......+..+...|||.+.++..
T Consensus 332 ~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 332 GYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp SCCCSEEEEEEECTTCCEEEEEE
T ss_pred ccccCcceEEEECCCCCEEEEec
Confidence 11235688999999999877765
No 353
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.52 E-value=0.064 Score=48.76 Aligned_cols=200 Identities=12% Similarity=0.082 Sum_probs=106.1
Q ss_pred CeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEe--cCCCEEEEE--eCCCcEEEEeCCCCceeEEeeCC----
Q 010362 276 EMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFS--RDGSQILST--SFDSTARIHGLKSGKLLKEFRGH---- 347 (512)
Q Consensus 276 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~--~~dg~v~i~d~~~~~~~~~~~~~---- 347 (512)
..++.++.||.|.-+|..+|+.+.++......++....-. +.+..++.+ +.||.++.++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 4788899999999999999999999874311233221100 112234444 57999999999888555444321
Q ss_pred ccceeE---EEE-c----CCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCC-ceeEEEEEc---C-CCCCeEEE
Q 010362 348 SSYVND---AIF-T----NDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGD-ASVNSVHLF---P-KNPDHIVV 414 (512)
Q Consensus 348 ~~~v~~---~~~-~----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~---~-~~~~~l~~ 414 (512)
.+++.. ... . ..+..+++|+.+|.+...|+++|+.+..+.......... ....+.... . .....++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 112211 000 0 135578899999999999999999998886542110000 000011100 0 11245555
Q ss_pred EcCCCcEEEEecCCeE----EEEeeCCcccCCcEE-EEEECCCCCEEEEEeCCCeEEEEEcCCCeeEE
Q 010362 415 CNKTSSIYIMTLQGQV----VKSFSSGKREGGDFV-AACVSPKGEWIYCVGEDRNLYCFSHQSGKLEH 477 (512)
Q Consensus 415 ~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~ 477 (512)
+..+..+.+.+..|.. ...+..... ...+. ....+.|+.+ +.++.||.|+.+|..+|..+-
T Consensus 171 g~~~y~v~~~~~sG~~W~~~~s~~~~~~~-~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHSYDGASYNVTYSTWQQNVL-DVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECCTTSCCCCCEEEEEECCTT-THHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEECCCCCeEEEeccccccccc-ccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 5555555554422210 000000000 00000 0001234666 457888999999988888765
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.73 E-value=4.9 Score=35.40 Aligned_cols=218 Identities=13% Similarity=0.059 Sum_probs=112.6
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEE
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKE 343 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~ 343 (512)
..|..++..... .++. . ||.|..|-....-.+. +.......|..++...+. .++. . ||.|+.|-......+..
T Consensus 24 ~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 24 SGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLT-MPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTS-CCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCC-CCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCC
Confidence 467777765432 3333 4 8999999755422221 111234467777766433 3333 5 89999997654222111
Q ss_pred eeCCccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEE
Q 010362 344 FRGHSSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYI 423 (512)
Q Consensus 344 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~ 423 (512)
-..-...|..++...+ ..+.-. ||.|..|-....-... .+. .....|..++.... ..++ -. ++.++.
T Consensus 97 P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg---~~~---~~~~~i~~i~~G~~--~~~~-l~-~G~v~~ 163 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT---VPA---EAQSGVTALDGGVY--TALA-VK-NGGVIA 163 (282)
T ss_dssp CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS---CCG---GGGSSEEEEEECSS--EEEE-EE-TTEEEE
T ss_pred CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC---CCc---cCCCCeEEEEcccC--EEEE-EE-CCEEEE
Confidence 0111235777776654 333444 8999999755422111 111 11234666655432 2233 33 799999
Q ss_pred EecC--CeEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeEEEE
Q 010362 424 MTLQ--GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLLATY 501 (512)
Q Consensus 424 ~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 501 (512)
|-.. ++.- ........+..++...+.. ++- .||.|+.|-......+..-......|..|+......++++
T Consensus 164 wG~n~~gqlg----~p~~~~~~v~~i~~G~~hs--~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~- 235 (282)
T 3qhy_B 164 WGDNYFGQTT----VPAEAQSGVDDVAGGIFHS--LAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK- 235 (282)
T ss_dssp EECCTTSTTS----CCGGGGSSEEEEEECSSEE--EEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-
T ss_pred ecCCCCCCCC----CceecCCCeEEEEecCCEE--EEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-
Confidence 9765 2211 1111123466666554433 333 5999999976543211111112245777776544333333
Q ss_pred ECCCeEEEec
Q 010362 502 GEDCTMKLWK 511 (512)
Q Consensus 502 ~~dg~i~iW~ 511 (512)
||.|..|-
T Consensus 236 --~g~v~~wG 243 (282)
T 3qhy_B 236 --NGKVIAWG 243 (282)
T ss_dssp --TTEEEEES
T ss_pred --CCEEEEec
Confidence 89998883
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.65 E-value=6.2 Score=36.36 Aligned_cols=142 Identities=10% Similarity=0.140 Sum_probs=84.5
Q ss_pred cEEEEeCCCC--ceeeecCCCCCCCCCCceeEEEEEc---CC---CCCeE-EEEcCCCcEEEEecCCeEEEEeeCCcc--
Q 010362 371 TVKVWDLKST--DCLQTFKPPPPLRGGDASVNSVHLF---PK---NPDHI-VVCNKTSSIYIMTLQGQVVKSFSSGKR-- 439 (512)
Q Consensus 371 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~---~~---~~~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~~-- 439 (512)
+|.+||+.+. +.++.+..+............+.+. |. +..++ ++-...+.|.++|+......++.....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5778899988 8888887765544456678888887 22 12333 334456789999998544333331100
Q ss_pred -c-------------CCcEEEEEECCC----CCEEEEEeCCC-eEEEEE---cCCCeeEEec--cccC---CCeEEEEEc
Q 010362 440 -E-------------GGDFVAACVSPK----GEWIYCVGEDR-NLYCFS---HQSGKLEHLM--KVHE---KDVIGVTHH 492 (512)
Q Consensus 440 -~-------------~~~~~~~~~s~~----g~~l~~g~~dg-~i~iwd---~~~~~~~~~~--~~h~---~~v~~v~~~ 492 (512)
. ...+..+++||+ ++.|+.....+ .++--. +++......+ .+.. ..-..++..
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 0 135778899998 78888777554 343333 1122111111 1122 223345665
Q ss_pred -CCCCeEEEEECCCeEEEecC
Q 010362 493 -PHRNLLATYGEDCTMKLWKP 512 (512)
Q Consensus 493 -p~~~~l~s~~~dg~i~iW~~ 512 (512)
.+|.++++--....|..|++
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNT 304 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEET
T ss_pred CCCCeEEEEeccCCeEEEEeC
Confidence 57777877778888999975
No 356
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=92.05 E-value=0.26 Score=33.57 Aligned_cols=29 Identities=24% Similarity=0.208 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHhcChHHHHHHHHhhcCcc
Q 010362 9 DVIKIVLQFCKENSLQQTFQTLQNECQVS 37 (512)
Q Consensus 9 e~~~li~q~L~e~G~~~t~~~l~~Es~~~ 37 (512)
-+.-||-.||+-+||+.|+.+|+-|||..
T Consensus 20 Li~~LVrEyLef~~l~~TlsVf~pEs~l~ 48 (82)
T 2d68_A 20 LVASLVAEFLQFFNLDFTLAVFQPETSTL 48 (82)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCcchHHhhhhccCCC
Confidence 36779999999999999999999999996
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=90.57 E-value=16 Score=37.03 Aligned_cols=244 Identities=9% Similarity=0.009 Sum_probs=121.1
Q ss_pred EEEE-ECCCCCEEEEEeC-----CCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEe--------
Q 010362 217 ECAR-FSPDGQFLVSCSF-----DGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGS-------- 282 (512)
Q Consensus 217 ~~~~-~s~~~~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-------- 282 (512)
..+. ++|++++++.+-+ -..++++|+.+++.+..--....+.-+--......++|..++..+++..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 3455 8999998886532 2379999999998764211000000000000123447764444444321
Q ss_pred --CCCeEEEEEccCCe--eeEEeccccccCeEEEEEecCCCE-----EEEEeCC---CcEEEEeCCC--CceeEEeeCCc
Q 010362 283 --QDGKIKVWRIRSGQ--CLRRLERAHSEGVTSLVFSRDGSQ-----ILSTSFD---STARIHGLKS--GKLLKEFRGHS 348 (512)
Q Consensus 283 --~dg~i~vwd~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~-----l~~~~~d---g~v~i~d~~~--~~~~~~~~~~~ 348 (512)
....|+.|.+-+.. -...+.......-.+...++++.+ +++.+.+ ..+++.|... ++ ...+....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCC
Confidence 12468888876542 222233122222334455666652 4443322 4566666543 32 22232222
Q ss_pred cceeEEEEcCCCCEEEEE----------eCCCcEEEEeCCCCce-------eeecCCCCCCCCCCceeEEEEEcCCCCCe
Q 010362 349 SYVNDAIFTNDGSRVVTA----------SSDCTVKVWDLKSTDC-------LQTFKPPPPLRGGDASVNSVHLFPKNPDH 411 (512)
Q Consensus 349 ~~v~~~~~~~~~~~l~~~----------~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (512)
. ..+..+.++.+++.. ...+.|...|+.++.. ...+..+ .....+..+.+..+ .+
T Consensus 291 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~--~l 362 (711)
T 4hvt_A 291 D--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTP----TANEVFNFISTTKD--RV 362 (711)
T ss_dssp T--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECC----CTTEEEEEEEECSS--CE
T ss_pred c--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECC----CCCCeEEEEEEECC--EE
Confidence 1 112334455554432 2467788888876421 1111111 23457778888764 57
Q ss_pred EEEEcCCCc--EEEEecCCeE--EEE-eeCCcccCCcEEEEEECCCCCEE-EEEe---CCCeEEEEEcC
Q 010362 412 IVVCNKTSS--IYIMTLQGQV--VKS-FSSGKREGGDFVAACVSPKGEWI-YCVG---EDRNLYCFSHQ 471 (512)
Q Consensus 412 l~~~~~~~~--i~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~s~~g~~l-~~g~---~dg~i~iwd~~ 471 (512)
+++...++. +.+++..+.. ... +... ..+.+.....++++..+ ++.+ .-+.++.+|..
T Consensus 363 ~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp--~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 363 FLATYDNVVAKVVTFTLENEQWTKPVVLKLP--YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEETTEEEEEEECEETTEECCCEEECCC--STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCEEEEEEEECCCCceEEEeccCCC--CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 777776765 5666665332 222 2111 12346666667776544 4333 34678888876
No 358
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.31 E-value=8.9 Score=33.68 Aligned_cols=242 Identities=11% Similarity=0.004 Sum_probs=124.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccC
Q 010362 215 HAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS 294 (512)
Q Consensus 215 ~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~ 294 (512)
.|..++...... ++. . ||.|..|-......... +. .....|..++...+. .++. . ||.|..|-...
T Consensus 25 ~i~~ia~G~~h~-~~l-~-~G~v~~wG~n~~Gqlg~-p~-------~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~ 90 (282)
T 3qhy_B 25 GVDAIAGGYFHG-LAL-K-GGKVLGWGANLNGQLTM-PA-------ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNE 90 (282)
T ss_dssp SCCEEEECSSEE-EEE-E-TTEEEEEECCSSSTTSC-CG-------GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCT
T ss_pred CCcEEEeCCCeE-EEE-E-CCEEEEEeCCCCCCCCC-Cc-------cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCC
Confidence 355555544322 233 4 89999997544221110 00 023467777766443 3333 4 89999997543
Q ss_pred CeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCccceeEEEEcCCCCEEEEEeCCCcEEE
Q 010362 295 GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDGSRVVTASSDCTVKV 374 (512)
Q Consensus 295 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 374 (512)
.-.+.. ...-...|..++...+ +.+.-. ||.|+.|-......+..-......|..++.... ..+.-. ||.+..
T Consensus 91 ~Gqlg~-P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~ 163 (282)
T 3qhy_B 91 DGQTTV-PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIA 163 (282)
T ss_dssp TSTTCC-CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEE
T ss_pred CCCCCC-CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEE
Confidence 221111 1122346878777643 344445 999999976543222111112345766666543 223333 799999
Q ss_pred EeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC--CeEEEEeeCCcccCCcEEEEEECCC
Q 010362 375 WDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ--GQVVKSFSSGKREGGDFVAACVSPK 452 (512)
Q Consensus 375 wd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~ 452 (512)
|-........ .+. .....|..++.... ..++. .++.++.|-.. ++.- ........+..++...+
T Consensus 164 wG~n~~gqlg---~p~---~~~~~v~~i~~G~~--hs~al--~~G~v~~wG~n~~gqlg----~p~~~~~~v~~i~~G~~ 229 (282)
T 3qhy_B 164 WGDNYFGQTT---VPA---EAQSGVDDVAGGIF--HSLAL--KDGKVIAWGDNRYKQTT----VPTEALSGVSAIASGEW 229 (282)
T ss_dssp EECCTTSTTS---CCG---GGGSSEEEEEECSS--EEEEE--ETTEEEEEECCTTSTTC----CCGGGGSSCCEEEECSS
T ss_pred ecCCCCCCCC---Cce---ecCCCeEEEEecCC--EEEEE--ECCeEEEEECCCCCCCC----CCcccCCCceEEEcCCC
Confidence 9755422111 111 11245666665443 23444 59999999765 2211 01111234556655544
Q ss_pred CCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCeEEEEEcCCCCeE
Q 010362 453 GEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHRNLL 498 (512)
Q Consensus 453 g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 498 (512)
...++ . ||.|+.|-.....++.. ...|..|+..+...+.
T Consensus 230 h~~al--~-~g~v~~wG~n~~gq~~v----~~~v~~iaaG~~h~~a 268 (282)
T 3qhy_B 230 YSLAL--K-NGKVIAWGSSRTAPSSV----QSGVSSIEAGPNAAYA 268 (282)
T ss_dssp CEEEE--E-TTEEEEESTTCCCCGGG----SSCEEEEEECSSCEEE
T ss_pred EEEEE--E-CCEEEEecCCCCccccC----CCCcEEEEECcCeEEE
Confidence 33333 3 99999997665433322 2357777776554333
No 359
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=89.26 E-value=12 Score=33.67 Aligned_cols=165 Identities=12% Similarity=0.110 Sum_probs=96.0
Q ss_pred cCceEEE-EECC--CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEE
Q 010362 213 KSHAECA-RFSP--DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKV 289 (512)
Q Consensus 213 ~~~v~~~-~~s~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~v 289 (512)
...|.++ ...+ +..++++.+.+|.|+.-.+..-..... .....-.+.. ...+..+........++..+..|.+..
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-GGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIR 171 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-SCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-CceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEE
Confidence 4445554 4442 578999999999999988755322211 0001112222 344555544455567888888999888
Q ss_pred EEcc--CCe-------eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-------ceeEEee--CCccce
Q 010362 290 WRIR--SGQ-------CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSG-------KLLKEFR--GHSSYV 351 (512)
Q Consensus 290 wd~~--~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-------~~~~~~~--~~~~~v 351 (512)
+... .-. -+.-+.......|.++...+++..++..+..|.++.-.+..- +-+..++ ...+.+
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~l 251 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRL 251 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSE
T ss_pred EECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeE
Confidence 8776 211 111122223456777777666778999999999988875322 2222222 213345
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010362 352 NDAIFTNDGSRVVTASSDCTVKVWDLKS 379 (512)
Q Consensus 352 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 379 (512)
..+....+...++..+.+|.+.-++...
T Consensus 252 v~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 252 VGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 5544444455677777888877776643
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.64 E-value=15 Score=33.86 Aligned_cols=216 Identities=8% Similarity=0.007 Sum_probs=112.6
Q ss_pred CceEEEEECCCCCEEEE--EeC-------------CCeEEEEEcCCC--eeeccccccccceeeccCcceeEEEEc---C
Q 010362 214 SHAECARFSPDGQFLVS--CSF-------------DGFIEVWDYLSG--KLKKDLQYQADETFMMHDETVLCIEFS---R 273 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~s--g~~-------------dg~i~iwd~~~~--~~~~~~~~~~~~~~~~h~~~v~~l~~s---~ 273 (512)
-.|..+...+++++-+. |-. --+|.+||+.++ +.++.+.+...... ....+..+++. |
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~--~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVE--KPTYFGGFAVDVANP 164 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCC--CGGGEEEEEEEESCT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcc--cCCccceEEEecccC
Confidence 35677777777765443 211 126889999999 88887766433222 34668888887 2
Q ss_pred C----CCeEEEEe-CCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCCc
Q 010362 274 D----SEMLASGS-QDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHS 348 (512)
Q Consensus 274 ~----~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~ 348 (512)
+ +.++..+. ..+.|.|+|+.+++..+... .. |.|+....+ ..+|.-.-| .
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~---~~------~~pd~~~~~--~i~G~~~~~--------------~ 219 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH---PT------FKAERPTKF--DYGGKEYEF--------------K 219 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC---GG------GSCCSCEEE--EETTEEEEE--------------C
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc---CC------CccccCcce--EECCEEeEe--------------c
Confidence 2 33444443 46789999999998766542 11 334411111 112221111 2
Q ss_pred cceeEEEEcCC----CCEEEEEeCCCcEEEEeCCC-----CceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCC
Q 010362 349 SYVNDAIFTND----GSRVVTASSDCTVKVWDLKS-----TDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTS 419 (512)
Q Consensus 349 ~~v~~~~~~~~----~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~ 419 (512)
..+..|+.+|+ ++.|.-....+ -++|.+.+ ......++.... .+....-..+++.+....++++--...
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~~~~ 297 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGN-RGKYNDAIALAYDPKTKVIFFAEANTK 297 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEEECTTTCEEEEEESSSS
T ss_pred cCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeee-cCCCCCcceEEEeCCCCeEEEEeccCC
Confidence 34888888887 66666555443 23333322 111000000000 010122234455444446666667778
Q ss_pred cEEEEecCC-----eEEEEeeCCcccCCcEEEEEECCCCCEEEEE
Q 010362 420 SIYIMTLQG-----QVVKSFSSGKREGGDFVAACVSPKGEWIYCV 459 (512)
Q Consensus 420 ~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g 459 (512)
.|..|+..+ .....+.... .-.....+.+.++|.+.+..
T Consensus 298 aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 298 QVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEE
T ss_pred eEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEEEE
Confidence 888888876 2223333222 23345667776666544444
No 361
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=86.74 E-value=19 Score=33.03 Aligned_cols=228 Identities=11% Similarity=0.066 Sum_probs=123.5
Q ss_pred EcCCCCeEEEEeCCCeEEEEEccC-------CeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeC---CC---
Q 010362 271 FSRDSEMLASGSQDGKIKVWRIRS-------GQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL---KS--- 337 (512)
Q Consensus 271 ~s~~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~---~~--- 337 (512)
+-|+..++++.+.+|.|+--.+.+ ++-+..+.......+..+........++..+..|.++-+.. ..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 346778999999999999876532 11222222234566766666666777888888888766543 22
Q ss_pred ---CceeEE---eeCCccceeEEEEcC---CCCEEEEEeCCCcEEEEeCCCCce-----eeecCCCCCCCCCCceeEEEE
Q 010362 338 ---GKLLKE---FRGHSSYVNDAIFTN---DGSRVVTASSDCTVKVWDLKSTDC-----LQTFKPPPPLRGGDASVNSVH 403 (512)
Q Consensus 338 ---~~~~~~---~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~i~~~~ 403 (512)
|..+.. +. ....|.++.... ++.+++.++..|.++...+..... ...+. +.. ...+..+.
T Consensus 83 ~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~----L~~-~d~lv~v~ 156 (370)
T 3l6v_A 83 NARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAIN----LDE-GDALVGVA 156 (370)
T ss_dssp TSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSC----CCT-TCCEEEEE
T ss_pred ccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEE----eCC-CCEEEEEE
Confidence 222211 22 233455554432 456899999999999887653221 11111 111 23444444
Q ss_pred EcCCCCCeEEEEcCCCcEEEEecCC--------eEEEEeeCCcccCCcEEEEEECC------------------------
Q 010362 404 LFPKNPDHIVVCNKTSSIYIMTLQG--------QVVKSFSSGKREGGDFVAACVSP------------------------ 451 (512)
Q Consensus 404 ~~~~~~~~l~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~s~------------------------ 451 (512)
.... ...++..+..|.+..++... .-++.+... .+..+..+...+
T Consensus 157 ~~~~-~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~--~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~ 233 (370)
T 3l6v_A 157 LTDG-DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA--KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGA 233 (370)
T ss_dssp EECS-CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC--TTCCEEEEEEECCC----------------------
T ss_pred EeCC-CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC--CCCEEEEEEEeccccccccccccccccccccccccc
Confidence 4433 35677778888877776531 112211111 123455444433
Q ss_pred -----------CCCEEEEEeCCCeEEEEEcCCCe-------eEEe--ccccCCCeEEEEEcCCCCeEEEEECCCeE
Q 010362 452 -----------KGEWIYCVGEDRNLYCFSHQSGK-------LEHL--MKVHEKDVIGVTHHPHRNLLATYGEDCTM 507 (512)
Q Consensus 452 -----------~g~~l~~g~~dg~i~iwd~~~~~-------~~~~--~~~h~~~v~~v~~~p~~~~l~s~~~dg~i 507 (512)
++..+++.+..|..+...+..-. =+.. +....+.+..+.+..+...+...+..|.+
T Consensus 234 ~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~ 309 (370)
T 3l6v_A 234 EPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTL 309 (370)
T ss_dssp -------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCE
T ss_pred cccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeE
Confidence 45689999999998888765321 1122 22223445554443333444445556654
No 362
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=85.97 E-value=18 Score=32.13 Aligned_cols=230 Identities=13% Similarity=0.122 Sum_probs=119.8
Q ss_pred CCCCeEEEEeCCCeEEEEEccCCeee-------EEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeC---CC-----
Q 010362 273 RDSEMLASGSQDGKIKVWRIRSGQCL-------RRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL---KS----- 337 (512)
Q Consensus 273 ~~~~~l~s~~~dg~i~vwd~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~---~~----- 337 (512)
|+..++++.+.+|.|+--.+.+-+.. ..+.......+..+........++..+..|.++-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 35567888999999987776542211 1111123345555555556677888888888666543 22
Q ss_pred -CceeE---EeeCCccceeEEEEc---CCCCEEEEEeCCCcEEEEeCCCCceeee--cCCCCCCCCCCceeEEEEEcCCC
Q 010362 338 -GKLLK---EFRGHSSYVNDAIFT---NDGSRVVTASSDCTVKVWDLKSTDCLQT--FKPPPPLRGGDASVNSVHLFPKN 408 (512)
Q Consensus 338 -~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 408 (512)
|.++. .+. ....|.++..- +++.+++..+.+|.++--.+........ ... ..+... ..+..+......
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~-i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVA-IKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEES-SCCCTT-CCEEEEEEECTT
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEE-EEECCC-CEEEEEEEeCCC
Confidence 22211 122 23345555432 3456789999999999887643221110 000 011122 344444444333
Q ss_pred CCeEEEEcCCCcEEEEecCC-----e---EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-------
Q 010362 409 PDHIVVCNKTSSIYIMTLQG-----Q---VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG------- 473 (512)
Q Consensus 409 ~~~l~~~~~~~~i~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~------- 473 (512)
..++..+.+|.+..++... . -+..+.. ..+..+..+....++..+++.+..|.+.-.++..-
T Consensus 158 -~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L--~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~ 234 (307)
T 1zi0_A 158 -DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRL--GEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRAT 234 (307)
T ss_dssp -CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC--CTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTS
T ss_pred -CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEe--CCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCC
Confidence 5677888888877777641 1 1111111 12345666665556678889999999888876321
Q ss_pred --eeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEE
Q 010362 474 --KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMK 508 (512)
Q Consensus 474 --~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~ 508 (512)
.....+..-.+.+..+....+..-++..+.+|.+.
T Consensus 235 kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~i 271 (307)
T 1zi0_A 235 KGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLV 271 (307)
T ss_dssp CCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEE
T ss_pred CCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEE
Confidence 11112222224454444433334445556666543
No 363
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.89 E-value=18 Score=38.16 Aligned_cols=39 Identities=28% Similarity=0.452 Sum_probs=34.2
Q ss_pred cceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEec
Q 010362 264 ETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE 302 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 302 (512)
..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 457888888888999999999999999999999887754
No 364
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=84.79 E-value=22 Score=31.94 Aligned_cols=243 Identities=14% Similarity=0.118 Sum_probs=126.8
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccC--------
Q 010362 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS-------- 294 (512)
Q Consensus 223 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~-------- 294 (512)
|+..++++.+.+|.|+--....-+.... ....+... ..+..+........|+..+..|.+.-+....
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~----~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a 77 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNG----QDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKD 77 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTT----CCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCc----cccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCC
Confidence 5666788899999998765432111000 00112223 3444444444555677777788766665421
Q ss_pred -CeeeEEe-ccccccCeEEEEEecC---CCEEEEEeCCCcEEEEeCCC--------CceeEEeeCCccceeEEEEcCCCC
Q 010362 295 -GQCLRRL-ERAHSEGVTSLVFSRD---GSQILSTSFDSTARIHGLKS--------GKLLKEFRGHSSYVNDAIFTNDGS 361 (512)
Q Consensus 295 -~~~~~~~-~~~~~~~i~~~~~~~~---~~~l~~~~~dg~v~i~d~~~--------~~~~~~~~~~~~~v~~~~~~~~~~ 361 (512)
|..+..+ .......|.++...++ +.+++.++.+|.++...+.. +.....+... ..+..+.......
T Consensus 78 ~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~ 156 (323)
T 1wp5_A 78 LGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMN 156 (323)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCS
T ss_pred CCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCC
Confidence 2222111 1122345665544333 56899999999999887642 1111223322 4455555555556
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeecCC---CCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC--------eE
Q 010362 362 RVVTASSDCTVKVWDLKSTDCLQTFKP---PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG--------QV 430 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--------~~ 430 (512)
.++..+.+|.+..++...-........ ...+ .....+.++...+.+...+++.+..|..+..++.. +.
T Consensus 157 ~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L-~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kG 235 (323)
T 1wp5_A 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNL-KEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRG 235 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCC-CTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCC
T ss_pred EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEe-CCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCC
Confidence 788888999988887653211111000 0011 12344556654444422677788888877776642 22
Q ss_pred EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q 010362 431 VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~ 472 (512)
+.........+..+..+....++..++..+.+|.+.-..+..
T Consensus 236 v~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 236 VVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp EECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred EECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 222222222222454333333445566777777776666543
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=83.25 E-value=25 Score=31.38 Aligned_cols=197 Identities=12% Similarity=0.118 Sum_probs=108.2
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeeeccc-cccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccCC------
Q 010362 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDL-QYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSG------ 295 (512)
Q Consensus 223 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~------ 295 (512)
|+..++++.+.+|.|+--.+..-+....- .....-.+... ..+..+........++..+..|.++-+....-
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 45667888999999998766433211100 00000011222 33444444445556777788888777765321
Q ss_pred ---eeeE-EeccccccCeEEEEEec---CCCEEEEEeCCCcEEEEeCCC-------CceeEEeeCCccceeEEEEcCCCC
Q 010362 296 ---QCLR-RLERAHSEGVTSLVFSR---DGSQILSTSFDSTARIHGLKS-------GKLLKEFRGHSSYVNDAIFTNDGS 361 (512)
Q Consensus 296 ---~~~~-~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~v~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~ 361 (512)
..+. .+.......|.++...+ +..+++..+..|.++...+.. |.....+.. ...+..+....++.
T Consensus 85 ~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 1100 11112234455554443 467888999999999887642 222223333 44566665555566
Q ss_pred EEEEEeCCCcEEEEeCCCCce-------eeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC
Q 010362 362 RVVTASSDCTVKVWDLKSTDC-------LQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 427 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~ 427 (512)
.++..+.+|.+..+....-.. ...+.. . ....+.++...+.+ ..+++.+..|.....++.
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L----~-~~d~vv~~~~v~~~-~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL----K-EGDLFVKVLSVKEN-PYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC----C-TTCCEEEEEECTTC-SEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe----C-CCCEEEEEEEECCC-CeEEEEECCCceEEEEHH
Confidence 788899999998887654211 111111 1 13445555544433 567788888888888774
No 366
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=82.22 E-value=31 Score=31.82 Aligned_cols=196 Identities=12% Similarity=0.179 Sum_probs=101.6
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCC--------ce---eEEeeC-CccceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010362 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSG--------KL---LKEFRG-HSSYVNDAIFTNDGSRVVTASSDCTVKVW 375 (512)
Q Consensus 308 ~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~--------~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 375 (512)
.+..++.. ....+.-..||.|+.|-.... .. ...+.. ....+..++.+......+.-..||.|..|
T Consensus 54 ~i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~w 131 (389)
T 3kci_A 54 RPVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 131 (389)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEE
T ss_pred ceEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEE
Confidence 45555443 455666678999999964321 11 111111 12234446666666777777889999999
Q ss_pred eCCCCceeee-----cCCCCCCC-CCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC--e--------EEEEeeCCcc
Q 010362 376 DLKSTDCLQT-----FKPPPPLR-GGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG--Q--------VVKSFSSGKR 439 (512)
Q Consensus 376 d~~~~~~~~~-----~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--~--------~~~~~~~~~~ 439 (512)
-....-.+.. ...+.... -....|..++.. ....++...+|.++.|-... + ..........
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G---~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~ 208 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG---GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL 208 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC---SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG
T ss_pred eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC---cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEeccc
Confidence 6432110000 00000000 011245555543 25566667899999997541 1 1111111112
Q ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-e----------eEEeccc-cCCCeEEEEEcCCCCeEEEEECCCeE
Q 010362 440 EGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG-K----------LEHLMKV-HEKDVIGVTHHPHRNLLATYGEDCTM 507 (512)
Q Consensus 440 ~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~-~----------~~~~~~~-h~~~v~~v~~~p~~~~l~s~~~dg~i 507 (512)
....+..++......+.++-..||.|+.|-.... + ....+.. ....|..|+... ...+.-..||.|
T Consensus 209 ~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v 286 (389)
T 3kci_A 209 QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAV 286 (389)
T ss_dssp TTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCE
T ss_pred CCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeE
Confidence 2345667766654567777788999999965421 1 1111111 122466666543 334444678888
Q ss_pred EEe
Q 010362 508 KLW 510 (512)
Q Consensus 508 ~iW 510 (512)
..|
T Consensus 287 ~~w 289 (389)
T 3kci_A 287 YTW 289 (389)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 367
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.05 E-value=36 Score=32.38 Aligned_cols=106 Identities=14% Similarity=0.161 Sum_probs=61.1
Q ss_pred cceeEEEEcCCCC-eEEEEeCCCeEEEEEccCCe---eeEEecc--------ccccCeEEEEEecC----CCEEEEEeC-
Q 010362 264 ETVLCIEFSRDSE-MLASGSQDGKIKVWRIRSGQ---CLRRLER--------AHSEGVTSLVFSRD----GSQILSTSF- 326 (512)
Q Consensus 264 ~~v~~l~~s~~~~-~l~s~~~dg~i~vwd~~~~~---~~~~~~~--------~~~~~i~~~~~~~~----~~~l~~~~~- 326 (512)
...+.|+|.|||. .++++...|.|++++..... .+..+.. ........|+|+|+ +...++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3567899999996 55566788999999753221 1222211 11456889999996 333333222
Q ss_pred -C----------CcEEEEeCCC----------CceeEEee--CCccceeEEEEcCCCCEEEEEeCC
Q 010362 327 -D----------STARIHGLKS----------GKLLKEFR--GHSSYVNDAIFTNDGSRVVTASSD 369 (512)
Q Consensus 327 -d----------g~v~i~d~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d 369 (512)
+ ..|.-|.+.. .+.+..+. ........|.|.|||.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455532 12233332 112235789999999887776653
No 368
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=82.02 E-value=25 Score=30.64 Aligned_cols=166 Identities=11% Similarity=0.084 Sum_probs=97.5
Q ss_pred ecCcCceEEEEECC-CCCEEEEEeCCCeEEEEEcCCCeeeccccccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEE
Q 010362 210 FGTKSHAECARFSP-DGQFLVSCSFDGFIEVWDYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIK 288 (512)
Q Consensus 210 ~~h~~~v~~~~~s~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~ 288 (512)
......|..+.-.. +..+++..+.+|.|+-..+..-. ... .....-.+. ....+..+........++..+..|.+.
T Consensus 64 l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~-~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~ 140 (276)
T 3no0_A 64 KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YKA-QGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVA 140 (276)
T ss_dssp SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TCS-TTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEE
T ss_pred CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hhc-CCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEE
Confidence 34455666654421 56789999999999999875532 111 000011222 234555555555566788888999988
Q ss_pred EEEccCC-------eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-------CceeEEeeCCccceeEE
Q 010362 289 VWRIRSG-------QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS-------GKLLKEFRGHSSYVNDA 354 (512)
Q Consensus 289 vwd~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~-------~~~~~~~~~~~~~v~~~ 354 (512)
.++...- .-+.-+.......|.++...+++..++..+..|.++...+.. ++-+..+ ...+.+..+
T Consensus 141 r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~ 219 (276)
T 3no0_A 141 RFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDL 219 (276)
T ss_dssp EEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEE
T ss_pred EEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEE
Confidence 8876421 111112212345677766666677899999999999887632 2223333 233445544
Q ss_pred EEcCCCCEEEEEeCCCcEEE--EeCCC
Q 010362 355 IFTNDGSRVVTASSDCTVKV--WDLKS 379 (512)
Q Consensus 355 ~~~~~~~~l~~~~~dg~i~i--wd~~~ 379 (512)
....+...++..+.+|.+.. ++...
T Consensus 220 ~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 220 IPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 44334456777778888777 77653
No 369
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=81.54 E-value=26 Score=30.52 Aligned_cols=156 Identities=13% Similarity=0.058 Sum_probs=91.7
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEE---EcCCCeeeccccccccceeeccCcceeEEEEcC-CCCeEEEEeCCCeEEE
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVW---DYLSGKLKKDLQYQADETFMMHDETVLCIEFSR-DSEMLASGSQDGKIKV 289 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iw---d~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~v 289 (512)
+.+.++.-....++|+.-+.+|.++-- ++..+.... + + .....|..+.... +..+++.++.+|.++-
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-------l-~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr 94 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-------K-SREEKIVGAFIREKFGNRLLLATKKGYVKK 94 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-------S-STTCCEEEEEEGGGSCSEEEEEETTSEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-------C-CCCCEEEEEECCcCCCCEEEEEeCCCEEEE
Confidence 345554444445556666667876643 332221111 1 1 1345666664421 5678999999999999
Q ss_pred EEccCCe----eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCC---------CceeEEeeCCccceeEEEE
Q 010362 290 WRIRSGQ----CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKS---------GKLLKEFRGHSSYVNDAIF 356 (512)
Q Consensus 290 wd~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~---------~~~~~~~~~~~~~v~~~~~ 356 (512)
..+..-. -+..+.......+..+....+...++..+..|.+..+.... |.....+.. ...|..+..
T Consensus 95 ~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~ 173 (276)
T 3no0_A 95 IPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRI 173 (276)
T ss_dssp EEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEE
T ss_pred EEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEE
Confidence 9876532 11111112345666666665667888899999988886532 111112222 345666655
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCC
Q 010362 357 TNDGSRVVTASSDCTVKVWDLKS 379 (512)
Q Consensus 357 ~~~~~~l~~~~~dg~i~iwd~~~ 379 (512)
.+++..++..+..|.++...+..
T Consensus 174 ~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 174 WNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp ESSCSEEEEEETTSCEEEEEGGG
T ss_pred eCCCCEEEEEeCCCcEEEeEHHH
Confidence 56667888999999998887653
No 370
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=80.80 E-value=30 Score=30.77 Aligned_cols=193 Identities=10% Similarity=0.122 Sum_probs=110.5
Q ss_pred CCCCeEEEEeCCCeEEEEEccCCee-------eEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCC---CC----
Q 010362 273 RDSEMLASGSQDGKIKVWRIRSGQC-------LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK---SG---- 338 (512)
Q Consensus 273 ~~~~~l~s~~~dg~i~vwd~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~---~~---- 338 (512)
++..++++.+.+|.|+-..+..-.. +..+.......+..+........++..+..|.++-.... ..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4667889999999999887754321 111211233456666555566788888889987766542 11
Q ss_pred --cee---EEeeCCccceeEEEEcC---CCCEEEEEeCCCcEEEEeCCCCceee--ecCCCCCCCCCCceeEEEEEcCCC
Q 010362 339 --KLL---KEFRGHSSYVNDAIFTN---DGSRVVTASSDCTVKVWDLKSTDCLQ--TFKPPPPLRGGDASVNSVHLFPKN 408 (512)
Q Consensus 339 --~~~---~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~ 408 (512)
..+ ..+.. ...|.++...+ ++.+++..+.+|.++...+....... -... ..+.. ...+..+.....
T Consensus 86 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~-i~L~~-~d~lv~~~~~~~- 161 (312)
T 1suu_A 86 KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIV-IKLND-KDFVTSAEIVFK- 161 (312)
T ss_dssp --CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEEC-BCCCT-TCCEEEEEEECT-
T ss_pred CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEE-EecCC-CCEEEEEEEeCC-
Confidence 110 11221 23354444332 45678889999999988764322111 0000 01112 345555554433
Q ss_pred CCeEEEEcCCCcEEEEecCC--------eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Q 010362 409 PDHIVVCNKTSSIYIMTLQG--------QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 409 ~~~l~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~ 471 (512)
...++..+.+|....+.... .-+..+... .+..+..+..-.++..+++.+.+|.....++.
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~--~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK--EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC--TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC--CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 36788888899888887642 112222221 23456666665567778899999999888875
No 371
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=79.04 E-value=62 Score=33.29 Aligned_cols=158 Identities=11% Similarity=0.122 Sum_probs=81.6
Q ss_pred CcceeEEEEcCC-CCeEEEEeCCCeEEEEEccCCeeeEEeccc------cccCeEEEEEecC-CCEEEEEeCCCc----E
Q 010362 263 DETVLCIEFSRD-SEMLASGSQDGKIKVWRIRSGQCLRRLERA------HSEGVTSLVFSRD-GSQILSTSFDST----A 330 (512)
Q Consensus 263 ~~~v~~l~~s~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------~~~~i~~~~~~~~-~~~l~~~~~dg~----v 330 (512)
...|.+|+++|. ...++.++..+.|...+ +.|+.-..+... ....+.++++.|. ...++++..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999995 35666677667665554 345443333311 1346999999984 345555543211 2
Q ss_pred EEE-eCCCCceeEEeeCC-------c--cceeEEEEcCC-CCEEEEEeCCCcEEEEeCC-CCceeeecCCCCCCCCCCce
Q 010362 331 RIH-GLKSGKLLKEFRGH-------S--SYVNDAIFTND-GSRVVTASSDCTVKVWDLK-STDCLQTFKPPPPLRGGDAS 398 (512)
Q Consensus 331 ~i~-d~~~~~~~~~~~~~-------~--~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~ 398 (512)
.+| ....|+.-...... . ..+..++++|. .+.++.+...+.| |-.. .++.-..+............
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCCCC
Confidence 233 33344433333210 1 13567888874 3456666534433 3222 23322222211110011245
Q ss_pred eEEEEEcCCCCCeEEEEcCC-CcEEE
Q 010362 399 VNSVHLFPKNPDHIVVCNKT-SSIYI 423 (512)
Q Consensus 399 i~~~~~~~~~~~~l~~~~~~-~~i~~ 423 (512)
+..+.+.|.++..++++..+ +.++.
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp EEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred eEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 78888998876677776655 44443
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.64 E-value=73 Score=34.47 Aligned_cols=39 Identities=28% Similarity=0.414 Sum_probs=32.4
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCC
Q 010362 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388 (512)
Q Consensus 350 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 388 (512)
.+.+++..++..++++-+.|+++|+|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 345666777888999999999999999999998877554
No 373
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=78.01 E-value=38 Score=30.31 Aligned_cols=191 Identities=13% Similarity=0.129 Sum_probs=107.3
Q ss_pred CCCCeEEEEeCCCeEEEEEccCCee--eEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeC---CC------Ccee
Q 010362 273 RDSEMLASGSQDGKIKVWRIRSGQC--LRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGL---KS------GKLL 341 (512)
Q Consensus 273 ~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~---~~------~~~~ 341 (512)
|+..++++.+.+|.|+--.+.+-+. ...+.......+..+........++..+..|.++-+.. .. |.++
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 5667888999999999876642110 00111123445556555556778888888888766544 21 2221
Q ss_pred EE---eeCCccceeEEEEcC---CCCEEEEEeCCCcEEEEeCCCCcee------eecCCCCCCCCCCceeEEEEEcCCCC
Q 010362 342 KE---FRGHSSYVNDAIFTN---DGSRVVTASSDCTVKVWDLKSTDCL------QTFKPPPPLRGGDASVNSVHLFPKNP 409 (512)
Q Consensus 342 ~~---~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~ 409 (512)
.. +. ....|.++..-+ ++.+++.++.+|.++...+...... ..+. +... ..+..+..... .
T Consensus 83 ~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~----l~e~-d~lv~~~~~~~-~ 155 (323)
T 1wp5_A 83 ANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGIN----LKND-DQVVDVHLTDG-M 155 (323)
T ss_dssp GGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSC----CCTT-CCEEEEEEECS-C
T ss_pred hhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEE----eCCC-CEEEEEEEeCC-C
Confidence 11 11 123455543333 2568999999999999877532211 1111 1112 34444444433 3
Q ss_pred CeEEEEcCCCcEEEEecCC-----e---EEEEeeCCcccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcCC
Q 010362 410 DHIVVCNKTSSIYIMTLQG-----Q---VVKSFSSGKREGGDFVAACVSPKGE-WIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 410 ~~l~~~~~~~~i~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~dg~i~iwd~~~ 472 (512)
+.++..+.+|.+..+.... . .+..... ..+..+..+..-+++. .+++.+..|.....++..
T Consensus 156 ~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L--~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 156 NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNL--KEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCC--CTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEe--CCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 5678888888888777642 1 1222111 1234466654434444 788888899888777653
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=75.53 E-value=45 Score=29.89 Aligned_cols=229 Identities=11% Similarity=0.069 Sum_probs=123.4
Q ss_pred CeEEEEeCCCeEEEEEccCC-------eeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEe---CCC------Cc
Q 010362 276 EMLASGSQDGKIKVWRIRSG-------QCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHG---LKS------GK 339 (512)
Q Consensus 276 ~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d---~~~------~~ 339 (512)
..+++.+.+|.|+--.+.+- +-+..+.......+..+........++.-+..|.++... +.. |.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 46778888999987765431 112222223345566666666677788777788766554 332 22
Q ss_pred eeEE---eeCCccceeEEEEcC---CCCEEEEEeCCCcEEEEeCCCCceeee-cCCCCCCCCCCceeEEEEEcCCCCCeE
Q 010362 340 LLKE---FRGHSSYVNDAIFTN---DGSRVVTASSDCTVKVWDLKSTDCLQT-FKPPPPLRGGDASVNSVHLFPKNPDHI 412 (512)
Q Consensus 340 ~~~~---~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l 412 (512)
++.. +. ....|.++..-+ +..+++.++.+|.++.-.+........ -.....+.. ...+..+...... ..+
T Consensus 84 ~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~-d~i 160 (327)
T 3uc1_A 84 HVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAG-DDL 160 (327)
T ss_dssp EHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTT-CEE
T ss_pred EHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCC-CEE
Confidence 2211 22 233455554333 567999999999999887654322111 000001112 2344444444433 677
Q ss_pred EEEcCCCcEEEEecC--Ce--------EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-------ee
Q 010362 413 VVCNKTSSIYIMTLQ--GQ--------VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSG-------KL 475 (512)
Q Consensus 413 ~~~~~~~~i~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~-------~~ 475 (512)
+..+..|.+..+... .- -+..+. -..+..+..+...+++.+++..+..|.++.-.+..- +-
T Consensus 161 ll~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~--L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G 238 (327)
T 3uc1_A 161 LLVSANGQSIRFSATDEALRPMGRATSGVQGMR--FNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKG 238 (327)
T ss_dssp EEEETTSEEEEEECCTTTSCCCCTTSBCEESSC--CCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred EEEECCCeEEEEECcccccCcCCcCCCCeeeec--CCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCc
Confidence 778888888777654 21 111111 112445777766667778999999999888775432 11
Q ss_pred EEecc--ccCCCeEEEEEcCCCCeEEEEECCCeEEE
Q 010362 476 EHLMK--VHEKDVIGVTHHPHRNLLATYGEDCTMKL 509 (512)
Q Consensus 476 ~~~~~--~h~~~v~~v~~~p~~~~l~s~~~dg~i~i 509 (512)
+..++ .-.+.+..+....+...++..+.+|.+.-
T Consensus 239 ~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir 274 (327)
T 3uc1_A 239 VLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIR 274 (327)
T ss_dssp EESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEE
T ss_pred EEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEE
Confidence 22222 11234554444434445555666666543
No 375
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.54 E-value=91 Score=32.90 Aligned_cols=39 Identities=28% Similarity=0.414 Sum_probs=33.3
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCC
Q 010362 350 YVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKP 388 (512)
Q Consensus 350 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 388 (512)
.+.+++..++..++++-+.|+++|+|++.+++++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 466777788888999999999999999999998877543
No 376
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=73.75 E-value=48 Score=29.37 Aligned_cols=245 Identities=13% Similarity=0.121 Sum_probs=122.1
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeeecccc-ccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEcc---C----
Q 010362 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIR---S---- 294 (512)
Q Consensus 223 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~---~---- 294 (512)
|+..++++.+.+|.|+--.+..-+....-. ......+..+ ..+..+........|+..+..|.+.-+... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 355678888999999876654322111000 0000011222 333344444445566666778876666542 1
Q ss_pred --CeeeEEe-ccccccCeEEEEEe---cCCCEEEEEeCCCcEEEEeCCC-------CceeEEeeCCccceeEEEEcCCCC
Q 010362 295 --GQCLRRL-ERAHSEGVTSLVFS---RDGSQILSTSFDSTARIHGLKS-------GKLLKEFRGHSSYVNDAIFTNDGS 361 (512)
Q Consensus 295 --~~~~~~~-~~~~~~~i~~~~~~---~~~~~l~~~~~dg~v~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~ 361 (512)
|..+..+ .......|.++... +++.+++..+.+|.++...+.. +.....+..+ +.+..+....+..
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 2222111 11233456666442 3566789999999999887642 1122223333 4455555555556
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeecCC---CCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCC--------eE
Q 010362 362 RVVTASSDCTVKVWDLKSTDCLQTFKP---PPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQG--------QV 430 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~--------~~ 430 (512)
.++..+.+|.+..++...-.....-.. ...+ .....+.++...+.+ ..+++.+..|..+-.++.. ..
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~-~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG 236 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRL-GEGDKVVSLIVPRGD-GAILTATQNGYGKRTAVAEYPTKSRATKG 236 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC-CTTCCEEEEECCCSS-CEEEEEETTSEEEEECGGGSCCCCTTSCC
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEe-CCCCEEEEEEEecCC-CEEEEEEcCCceEEEEHHHhccCCCCCCC
Confidence 788888899888887643221110000 0011 123455566544333 5678888888888777631 11
Q ss_pred EEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Q 010362 431 VKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQS 472 (512)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~ 472 (512)
....... ...+.+..+....+...++..+.+|.+.-++...
T Consensus 237 ~~~~~~~-~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 237 VISIKVT-ERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EESSCCC-TTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EEeeEec-CCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 1111111 1224454444433445566667777766666543
No 377
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=72.83 E-value=58 Score=29.94 Aligned_cols=237 Identities=12% Similarity=0.122 Sum_probs=117.9
Q ss_pred ceeEEEEcCCCCeEEEEeCCCeEEEEEccCC-e----------eeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEE
Q 010362 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSG-Q----------CLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIH 333 (512)
Q Consensus 265 ~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~-~----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~ 333 (512)
.|..++.. ....+.-..||.|..|-.... + ....+.......+..++.+....+.++-+.||.|+.|
T Consensus 54 ~i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~w 131 (389)
T 3kci_A 54 RPVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 131 (389)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEE
T ss_pred ceEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEE
Confidence 34444433 334555567888888864321 1 1111221123345556676666777777889999999
Q ss_pred eCCCCc-----------eeEEeeCC-ccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee------eecCCCCCCCCC
Q 010362 334 GLKSGK-----------LLKEFRGH-SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCL------QTFKPPPPLRGG 395 (512)
Q Consensus 334 d~~~~~-----------~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~ 395 (512)
-..... ....+... ...|..++.. ....+....+|.|..|-....-.+ ....+.......
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~ 209 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 209 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGT
T ss_pred eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccC
Confidence 653210 01111111 1246555554 345666678999999965321100 000000000011
Q ss_pred CceeEEEEEcCCCCCeEEEEcCCCcEEEEecC--Ce--------EEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeE
Q 010362 396 DASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ--GQ--------VVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNL 465 (512)
Q Consensus 396 ~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i 465 (512)
...+..++..... ...++-..++.++.|-.. ++ ..............+..++.. ..+.++-..+|.|
T Consensus 210 ~~~v~~ia~G~g~-~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v 286 (389)
T 3kci_A 210 GHRVVDIACGSGD-AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAV 286 (389)
T ss_dssp TSCEEEEEECCSS-CEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCE
T ss_pred CCeEEEEEEcCCC-cEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeE
Confidence 2345555543322 456666788999999654 11 111111111112235444443 3455556788999
Q ss_pred EEEEcCCC------------eeEEeccccCCCeEEEEEcCCCCeEEEEECCCeEEEe
Q 010362 466 YCFSHQSG------------KLEHLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLW 510 (512)
Q Consensus 466 ~iwd~~~~------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~~~dg~i~iW 510 (512)
+.|-.... .+..........|..|+... ...+....||.|..|
T Consensus 287 ~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~--~h~~al~~~G~v~~w 341 (389)
T 3kci_A 287 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTW 341 (389)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTCCEEEE
T ss_pred EEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEecc--CeEEEECCCCCEEEe
Confidence 99965421 11111111223566666543 334455788888888
No 378
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=69.58 E-value=1.1e+02 Score=31.56 Aligned_cols=159 Identities=11% Similarity=0.145 Sum_probs=83.4
Q ss_pred ccCeEEEEEecC-CCEEEEEeCCCcEEEEeCCCCceeEEeeCC-------ccceeEEEEcCC-CCEEEEEeCCCc----E
Q 010362 306 SEGVTSLVFSRD-GSQILSTSFDSTARIHGLKSGKLLKEFRGH-------SSYVNDAIFTND-GSRVVTASSDCT----V 372 (512)
Q Consensus 306 ~~~i~~~~~~~~-~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~-~~~l~~~~~dg~----i 372 (512)
...|.+++++|. ...+++++..+.|...+ ..++.-..+..+ ...+.+++++|. .+.++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999995 45677777777776654 244443333322 235899999884 344544443211 2
Q ss_pred EEEeC-CCCceeeecCCCCCCCC---CCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCc---ccCCcEE
Q 010362 373 KVWDL-KSTDCLQTFKPPPPLRG---GDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGK---REGGDFV 445 (512)
Q Consensus 373 ~iwd~-~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~ 445 (512)
.||-. ..++.-.....+..... ....+..+++.|.++..++++...+.|+.-+-.++......... .....+.
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~ 172 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYT 172 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTTTCEE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCCCCeE
Confidence 33432 33332222221111100 11134567888877677777765555443222244444333211 1124577
Q ss_pred EEEECCC-CCEEEEEeCC-CeE
Q 010362 446 AACVSPK-GEWIYCVGED-RNL 465 (512)
Q Consensus 446 ~~~~s~~-g~~l~~g~~d-g~i 465 (512)
.+.++|. +..++++..+ +.|
T Consensus 173 ~i~~~p~~~~~~~~~~~~~~~v 194 (789)
T 1sqj_A 173 SVIFDPERNGTIYASATAPQGM 194 (789)
T ss_dssp EEEECTTSTTCEEEEESSTTCE
T ss_pred EEEECCCCCCEEEEEEcCCCeE
Confidence 8888874 4566666654 444
No 379
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=69.36 E-value=27 Score=35.04 Aligned_cols=36 Identities=19% Similarity=0.427 Sum_probs=30.0
Q ss_pred ceeEEEEcCCCCeEEEEeCCCeEEEEEccCCeeeEEec
Q 010362 265 TVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRRLE 302 (512)
Q Consensus 265 ~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 302 (512)
.|.++.+ +..++++-+.|.++|+|++.+++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4666555 36799999999999999999999888765
No 380
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=68.93 E-value=5.6 Score=25.38 Aligned_cols=33 Identities=6% Similarity=0.036 Sum_probs=29.4
Q ss_pred cchhhHHHHHHHHHHhcChHHHHHHHHhhcCcc
Q 010362 5 IEARDVIKIVLQFCKENSLQQTFQTLQNECQVS 37 (512)
Q Consensus 5 ~~~~e~~~li~q~L~e~G~~~t~~~l~~Es~~~ 37 (512)
-+||.+.|||+--|.--||.+-|..|..+-+..
T Consensus 14 K~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~ 46 (66)
T 2xz2_A 14 KNREILYRLMISQLMYDGLEKFAMELSMLVKAD 46 (66)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCC
Confidence 368999999999999999999999999987754
No 381
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=68.71 E-value=6.3 Score=30.44 Aligned_cols=58 Identities=16% Similarity=0.103 Sum_probs=41.8
Q ss_pred chhhHHHHHHHHHHhcCh-----HHHHHHHHhhcCccccccccH---------HHHHhhhccCCchhhhhhhcc
Q 010362 6 EARDVIKIVLQFCKENSL-----QQTFQTLQNECQVSLNTVDSI---------ETFVADINSGRWDAILPQVAQ 65 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~G~-----~~t~~~l~~Es~~~~~~~~~~---------~~~~~~i~~g~w~~~~~~l~~ 65 (512)
|+++++. +.+.|.+.|| ..|+..| +|.|++.+.+..+ ..+...|.+|+.+-+++.-..
T Consensus 35 dK~~l~~-~a~~l~~lGf~i~AT~GTa~~L-~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~ 106 (143)
T 2yvq_A 35 FRPRFLG-VAEQLHNEGFKLFATEATSDWL-NANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNN 106 (143)
T ss_dssp GHHHHHH-HHHHHHTTTCEEEEEHHHHHHH-HHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCC
T ss_pred chHHHHH-HHHHHHHCCCEEEECchHHHHH-HHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCC
Confidence 4667776 4668999999 5888888 5699876543222 247777999999998885443
No 382
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=66.67 E-value=78 Score=28.93 Aligned_cols=245 Identities=11% Similarity=0.097 Sum_probs=126.0
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCeeecccc-ccccceeeccCcceeEEEEcCCCCeEEEEeCCCeEEEEEccC-------
Q 010362 223 PDGQFLVSCSFDGFIEVWDYLSGKLKKDLQ-YQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRS------- 294 (512)
Q Consensus 223 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~vwd~~~------- 294 (512)
|+..++++.+.+|.|+--.+..-.....-. ......++ ....+..+........|+..+..|.+.-+....
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 677789999999999976543211100000 00000111 344555555555556677777788776665421
Q ss_pred --CeeeEEe-ccccccCeEEEEEec---CCCEEEEEeCCCcEEEEeCCCC-------ceeEEeeCCccceeEEEEcCCCC
Q 010362 295 --GQCLRRL-ERAHSEGVTSLVFSR---DGSQILSTSFDSTARIHGLKSG-------KLLKEFRGHSSYVNDAIFTNDGS 361 (512)
Q Consensus 295 --~~~~~~~-~~~~~~~i~~~~~~~---~~~~l~~~~~dg~v~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~ 361 (512)
|..+..+ .......|.++...+ ++.+++.++..|.++...+... .....++. ...+..+.......
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCc
Confidence 2222211 112345566655432 4568999999999998876422 12222332 33455555555556
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeecCCC---CCCCCCCceeEEEEEcCC-------------------------------
Q 010362 362 RVVTASSDCTVKVWDLKSTDCLQTFKPP---PPLRGGDASVNSVHLFPK------------------------------- 407 (512)
Q Consensus 362 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~------------------------------- 407 (512)
.++..+.+|.+..++...-.....-... ..+ .....|.++...+.
T Consensus 163 ~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L-~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~ 241 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRL-AKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVA 241 (370)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC-CTTCCEEEEEEECCC------------------------------
T ss_pred eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEe-CCCCEEEEEEEeccccccccccccccccccccccccccccccccc
Confidence 7888888998888875432211100000 001 12234555444431
Q ss_pred ---CCCeEEEEcCCCcEEEEecCC--------eEEEEeeCCcccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Q 010362 408 ---NPDHIVVCNKTSSIYIMTLQG--------QVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQ 471 (512)
Q Consensus 408 ---~~~~l~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~dg~i~iwd~~ 471 (512)
....+++.+..|..+...+.. +-+..+.... ..+.+..+.+..++..++..+..|.+.-..+.
T Consensus 242 ~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~-~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 242 DNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTE-RNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp -----CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCT-TTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred cccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecC-CCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 235678888888887777641 2222222222 12345544433444556666666766555543
No 383
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.33 E-value=19 Score=35.40 Aligned_cols=60 Identities=15% Similarity=0.165 Sum_probs=42.5
Q ss_pred ceeEEEEcCCCCeEEEEeCC------------CeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEE
Q 010362 265 TVLCIEFSRDSEMLASGSQD------------GKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILST 324 (512)
Q Consensus 265 ~v~~l~~s~~~~~l~s~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 324 (512)
..-.|+|+|.|++++.-..+ ..+.+.+..+++..+-+.......++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45678999999866654322 2355666667776655554556789999999999888765
No 384
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.97 E-value=66 Score=34.79 Aligned_cols=38 Identities=13% Similarity=0.280 Sum_probs=32.0
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEee
Q 010362 308 GVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFR 345 (512)
Q Consensus 308 ~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~ 345 (512)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566677788899999999999999999999887754
No 385
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=64.08 E-value=1.3e+02 Score=30.57 Aligned_cols=192 Identities=13% Similarity=0.053 Sum_probs=90.4
Q ss_pred ceeEEEEcCCC-CeEEEEeCCCeEEEEEccCCeeeEEeccc------cccCeEEEEEec-CCCEEEEEeCC-------Cc
Q 010362 265 TVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERA------HSEGVTSLVFSR-DGSQILSTSFD-------ST 329 (512)
Q Consensus 265 ~v~~l~~s~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------~~~~i~~~~~~~-~~~~l~~~~~d-------g~ 329 (512)
.|..|+++|.. ..+..+...|.|...+ +.|+.-..+... ....|.+++++| +.+.++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 79999999963 4566666566655554 334433333211 124699999998 44455555421 12
Q ss_pred EEEEeC-CCCceeEEeeC-Cc--------cceeEEEEcCC-CCEEEEEeCCCcEEEEeCC-CCceeeecCCCCC------
Q 010362 330 ARIHGL-KSGKLLKEFRG-HS--------SYVNDAIFTND-GSRVVTASSDCTVKVWDLK-STDCLQTFKPPPP------ 391 (512)
Q Consensus 330 v~i~d~-~~~~~~~~~~~-~~--------~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~------ 391 (512)
..+|-. ..|+.-..... .. ..+..++++|. .+.++.+...|. -+|-.. .++.-........
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~~~~~~~~~~~ 181 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVESFPNPGTYIY 181 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECTTCCCCCCCBS
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCC-cEEEeCCCCcceecccCCCCCccccc
Confidence 334433 33333222221 10 12467899884 355666653321 233222 2322111111000
Q ss_pred -----CCCCCceeEEEEEcCCCC------CeEEEEcCCCcEEEEe-cC-CeEEEEeeCCcccCCcEEEEEECCCCCEEEE
Q 010362 392 -----LRGGDASVNSVHLFPKNP------DHIVVCNKTSSIYIMT-LQ-GQVVKSFSSGKREGGDFVAACVSPKGEWIYC 458 (512)
Q Consensus 392 -----~~~~~~~i~~~~~~~~~~------~~l~~~~~~~~i~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 458 (512)
.......+..+.+.|.++ ..+.++..++.-.+|. .+ +.......... .......+.++|++.+.++
T Consensus 182 ~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p-~~~~~~~~~~~~~~~l~~~ 260 (737)
T 2cn3_A 182 DPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQP-KGLLPHHGVLASNGMLYIT 260 (737)
T ss_dssp CTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCC-CSSEEEEEEECTTSEEEEE
T ss_pred CcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCC-CcccceEEEECCCCeEEEE
Confidence 011223467788877653 2566665444212232 23 44433333211 1122245667877665555
Q ss_pred E
Q 010362 459 V 459 (512)
Q Consensus 459 g 459 (512)
.
T Consensus 261 ~ 261 (737)
T 2cn3_A 261 Y 261 (737)
T ss_dssp E
T ss_pred e
Confidence 4
No 386
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.32 E-value=36 Score=33.13 Aligned_cols=59 Identities=14% Similarity=0.225 Sum_probs=43.4
Q ss_pred cEEEEEECCCCCEEEEEeC------------CCeEEEEEcCCCeeEEecccc-CCCeEEEEEcCCCCeEEEE
Q 010362 443 DFVAACVSPKGEWIYCVGE------------DRNLYCFSHQSGKLEHLMKVH-EKDVIGVTHHPHRNLLATY 501 (512)
Q Consensus 443 ~~~~~~~s~~g~~l~~g~~------------dg~i~iwd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~ 501 (512)
....++|+++|.+.++... ...|+.++..++++...+.+. ...++.++|+||++.|..+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4568999999987774332 226778888888877766544 3579999999999877654
No 387
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=61.88 E-value=26 Score=34.48 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=42.8
Q ss_pred EEEEEECCCCCEEEEEeCC------------CeEEEEEcCCCeeEEecccc-CCCeEEEEEcCCCCeEEEE
Q 010362 444 FVAACVSPKGEWIYCVGED------------RNLYCFSHQSGKLEHLMKVH-EKDVIGVTHHPHRNLLATY 501 (512)
Q Consensus 444 ~~~~~~s~~g~~l~~g~~d------------g~i~iwd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~ 501 (512)
.-.++|+|.|+++++-..+ ..+.+.+..++++...+.++ ..+++.++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4578999999966655432 24666777788887777665 4689999999999877654
No 388
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=61.79 E-value=34 Score=33.32 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=42.6
Q ss_pred cceeEEEEcCCCCeEEEEeC------------CCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEe
Q 010362 264 ETVLCIEFSRDSEMLASGSQ------------DGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTS 325 (512)
Q Consensus 264 ~~v~~l~~s~~~~~l~s~~~------------dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 325 (512)
.....|.|.++|.+.+.... ...+..++..+|+....+.......++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999987663321 125666676677755544322346789999999999888764
No 389
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=59.70 E-value=50 Score=33.19 Aligned_cols=38 Identities=24% Similarity=0.486 Sum_probs=30.7
Q ss_pred CceEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeeccccc
Q 010362 214 SHAECARFSPDGQFLVSCSFDGFIEVWDYLSGKLKKDLQY 253 (512)
Q Consensus 214 ~~v~~~~~s~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 253 (512)
..|.|+.+. ..++++-+.|.++|+|++.++.+......
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 457776664 77999999999999999999987765544
No 390
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=57.36 E-value=52 Score=23.85 Aligned_cols=60 Identities=3% Similarity=-0.041 Sum_probs=27.0
Q ss_pred CCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCC
Q 010362 275 SEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLK 336 (512)
Q Consensus 275 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~ 336 (512)
+.+.+.-..||.+.+|+...+..+..-.......-..+.+..+|++++... ++.+ +|...
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~-~~~~-iW~S~ 83 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDD-RLNT-VFVSN 83 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECT-TSCE-EEECS
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECC-CCCE-EEECC
Confidence 334444445555555553223333332211112224566677777665432 3443 66543
No 391
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=53.10 E-value=6.7 Score=26.71 Aligned_cols=33 Identities=9% Similarity=0.075 Sum_probs=28.3
Q ss_pred ccchhhHHHHHHHHHHhcChHHHHHHHHhhcCccc
Q 010362 4 EIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSL 38 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~t~~~l~~Es~~~~ 38 (512)
+++..++.+-|+++|+++| -|+..|.++-|++-
T Consensus 12 d~~~~~~~~~IL~lL~~~g--~sa~eLAk~LgiSk 44 (82)
T 1oyi_A 12 ERSNAEIVCEAIKTIGIEG--ATAAQLTRQLNMEK 44 (82)
T ss_dssp -CCSHHHHHHHHHHHSSST--EEHHHHHHHSSSCH
T ss_pred ccchHHHHHHHHHHHHHcC--CCHHHHHHHHCcCH
Confidence 3566788999999999999 89999999999964
No 392
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=52.43 E-value=2e+02 Score=29.07 Aligned_cols=225 Identities=12% Similarity=0.103 Sum_probs=110.8
Q ss_pred eeEEE-EcCCCCeEEEE-eCC----CeEEEEEccCCeeeEEecccc-cc------CeEEEEEecCCCEEEEEeC------
Q 010362 266 VLCIE-FSRDSEMLASG-SQD----GKIKVWRIRSGQCLRRLERAH-SE------GVTSLVFSRDGSQILSTSF------ 326 (512)
Q Consensus 266 v~~l~-~s~~~~~l~s~-~~d----g~i~vwd~~~~~~~~~~~~~~-~~------~i~~~~~~~~~~~l~~~~~------ 326 (512)
...+. ++|++++++.+ |.. ..++++|+.+++.+..-.... +. ....++|..+ ..++.+..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCc
Confidence 34455 88898876654 222 379999999998764211100 00 1134578744 44444321
Q ss_pred -----CCcEEEEeCCCCc--eeEEeeCCccce-eEEEEcCCCC-----EEEEEeCC---CcEEEEeCCCCc-eeeecCCC
Q 010362 327 -----DSTARIHGLKSGK--LLKEFRGHSSYV-NDAIFTNDGS-----RVVTASSD---CTVKVWDLKSTD-CLQTFKPP 389 (512)
Q Consensus 327 -----dg~v~i~d~~~~~--~~~~~~~~~~~v-~~~~~~~~~~-----~l~~~~~d---g~i~iwd~~~~~-~~~~~~~~ 389 (512)
...|+.|.+-+.. -...+.+....+ .+...++++. .+++.+.+ ..+.+.|..... ....+..+
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP 289 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC
Confidence 2457888775542 223344333322 2344556665 24444322 335555654311 11222222
Q ss_pred CCCCCCCceeEEEEEcCCCCCeEEEE----------cCCCcEEEEecCCe--------EEEEeeCCcccCCcEEEEEECC
Q 010362 390 PPLRGGDASVNSVHLFPKNPDHIVVC----------NKTSSIYIMTLQGQ--------VVKSFSSGKREGGDFVAACVSP 451 (512)
Q Consensus 390 ~~~~~~~~~i~~~~~~~~~~~~l~~~----------~~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~s~ 451 (512)
. ... +..+..+ .+++.. ...+.+...++.+. ....+.... ....+..+.+..
T Consensus 290 ~-----~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 359 (711)
T 4hvt_A 290 S-----DAT---LQGSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT-ANEVFNFISTTK 359 (711)
T ss_dssp T-----TCE---EEEEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC-TTEEEEEEEECS
T ss_pred C-----cce---EeeeECC-EEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC-CCCeEEEEEEEC
Confidence 1 111 1122222 333322 14567888887642 122222222 234566788876
Q ss_pred CCCEEEEEeCCCe--EEEEEcCCCe-eEEe-cccc-CCCeEEEEEcCCCC-eEEEEE
Q 010362 452 KGEWIYCVGEDRN--LYCFSHQSGK-LEHL-MKVH-EKDVIGVTHHPHRN-LLATYG 502 (512)
Q Consensus 452 ~g~~l~~g~~dg~--i~iwd~~~~~-~~~~-~~~h-~~~v~~v~~~p~~~-~l~s~~ 502 (512)
+ .++++...++. +++++..++. .... +... .+.+.....++++. ++++.+
T Consensus 360 ~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~s 415 (711)
T 4hvt_A 360 D-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIE 415 (711)
T ss_dssp S-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEE
T ss_pred C-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEe
Confidence 5 56667777764 7778877664 2222 2222 24566666667654 444444
No 393
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=49.73 E-value=32 Score=25.34 Aligned_cols=100 Identities=8% Similarity=0.065 Sum_probs=52.9
Q ss_pred HHHHHhcChHHHHHHHHhhcCccccccccHHHH-HhhhccCCchhhhhhhccc-cCChhHHHHHHHHHHHHHHHcCChHH
Q 010362 15 LQFCKENSLQQTFQTLQNECQVSLNTVDSIETF-VADINSGRWDAILPQVAQL-KLPRNKLEDLYEQIVLEMIELRELDT 92 (512)
Q Consensus 15 ~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~~-~~~i~~g~w~~~~~~l~~~-~~~~~~~~~l~~~~~~e~l~~~~~~~ 92 (512)
..|++..-|.++...+++=-.+.-+.....-.+ .-....|+|++++..+... .+.++. ...+-..-.-+...++.++
T Consensus 21 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~~~~~~ 99 (126)
T 4gco_A 21 NEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF-IKGYIRKAACLVAMREWSK 99 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHCCCHHH
Confidence 456677778888888876433322111111000 1123458888888865542 222221 1222333334567788899
Q ss_pred HHHHHHhcchhhhcccCChHHHHHHH
Q 010362 93 ARAILRQTQAMGVMKQEQPERYLRLE 118 (512)
Q Consensus 93 a~~~lr~~~~~~~~~~~~~~~~~~l~ 118 (512)
|+..+++.+.. .+..++-...|.
T Consensus 100 A~~~~~~al~l---~P~~~~a~~~l~ 122 (126)
T 4gco_A 100 AQRAYEDALQV---DPSNEEAREGVR 122 (126)
T ss_dssp HHHHHHHHHHH---CTTCHHHHHHHH
T ss_pred HHHHHHHHHHH---CcCCHHHHHHHH
Confidence 98888876554 344444444443
No 394
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=44.88 E-value=98 Score=27.73 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=56.9
Q ss_pred cHHHHHhhhccCCc---hhhhhhhccccCChhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchhhhcccCChHHHHHHHH
Q 010362 43 SIETFVADINSGRW---DAILPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH 119 (512)
Q Consensus 43 ~~~~~~~~i~~g~w---~~~~~~l~~~~~~~~~~~~l~~~~~~e~l~~~~~~~a~~~lr~~~~~~~~~~~~~~~~~~l~~ 119 (512)
.+++|++.|.+|++ =+|-+ .++-++..++..+++.+|+.+|-+-.... +...+...-.+|..
T Consensus 15 ~i~rl~~~I~~G~y~~~YEAHQ--------------~~RTi~~Ry~~~k~y~eAidLL~~GA~~l-l~~~Q~~sg~DL~~ 79 (336)
T 3lpz_A 15 IIARLQRRIAEGQPEEQYEAAQ--------------ETRLVAARYSKQGNWAAAVDILASVSQTL-LRSGQGGSGGDLAV 79 (336)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHH--------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCccccHHHH--------------HHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HHCCCcchHHHHHH
Confidence 46678888888887 33333 33344455566666666666655422211 12223333344444
Q ss_pred HhcccCCCccccccCChhhHHHHHHHHHHhccccccCchHHHHHHHHHHHhhhhcCCCCCC
Q 010362 120 LLVRTYFDAHEAYQDSTKERRRAQIAQAIAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG 180 (512)
Q Consensus 120 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rl~~l~~~~~~~~~~~~~~~~~ 180 (512)
++...+....... .+..+.++++-+.... ...|. ...++..+++|....+-.+.|
T Consensus 80 llvevy~~~~~~~----~~~~~~rL~~L~~~~~-~~~p~-r~~fi~~ai~WS~~~g~~~~G 134 (336)
T 3lpz_A 80 LLVDTFRQAGQRV----DGASRGKLLGCLRLFQ-PGEPV-RKRFVKEMIDWSKKFGDYPAG 134 (336)
T ss_dssp HHHHHHHHHTCCC----CHHHHHHHHHHHTTSC-TTCHH-HHHHHHHHHHHHHHHSSCTTC
T ss_pred HHHHHHHHcCCCC----CHHHHHHHHHHHHhCC-CCCcH-HHHHHHHHHHHHhhcCCCCCC
Confidence 4432211111111 1233444444433221 11223 467899999999886655544
No 395
>1vk8_A Hypothetical protein TM0486; protein with possible role in cell WALL biogenesis, structur genomics, joint center for structural genomics; HET: UNL; 1.80A {Thermotoga maritima} SCOP: d.58.48.1
Probab=44.41 E-value=4.5 Score=29.20 Aligned_cols=35 Identities=9% Similarity=0.158 Sum_probs=21.5
Q ss_pred HHHHHHhhcCccccccccHHHHHhhhccCCchhhhhhhcc
Q 010362 26 TFQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQVAQ 65 (512)
Q Consensus 26 t~~~l~~Es~~~~~~~~~~~~~~~~i~~g~w~~~~~~l~~ 65 (512)
.+...-+|||+++.. ..+. . +++|+|+++.+.++.
T Consensus 37 ~~i~vi~~sGL~y~~-~pmg---T-~IEGe~devm~vvk~ 71 (106)
T 1vk8_A 37 RAIEKISSWGMKYEV-GPSN---T-TVEGEFEEIMDRVKE 71 (106)
T ss_dssp HHHHHHHTTCSCEEE-CSSC---E-EEEECHHHHHHHHHH
T ss_pred HHHHHHHHcCCCeEe-CCCc---c-EEEcCHHHHHHHHHH
Confidence 334444579988764 2222 1 677999998885443
No 396
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=43.96 E-value=2.4e+02 Score=27.48 Aligned_cols=201 Identities=14% Similarity=0.207 Sum_probs=105.1
Q ss_pred eEEEEEccCCeeeEEeccc-------cccCeEEEEEecCCC-EEEEEeCCCc----------------------------
Q 010362 286 KIKVWRIRSGQCLRRLERA-------HSEGVTSLVFSRDGS-QILSTSFDST---------------------------- 329 (512)
Q Consensus 286 ~i~vwd~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~-~l~~~~~dg~---------------------------- 329 (512)
.|.+|++. |+.+.++..+ |...+....|.-||+ -+++.+.+|+
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 56777765 5555554321 334466666666764 4666666665
Q ss_pred EEEEeCCCCceeEEeeCC--ccce---------------eEEEEc-CCCCEEEEEe---CCCcEEEEeCCCCceeeecCC
Q 010362 330 ARIHGLKSGKLLKEFRGH--SSYV---------------NDAIFT-NDGSRVVTAS---SDCTVKVWDLKSTDCLQTFKP 388 (512)
Q Consensus 330 v~i~d~~~~~~~~~~~~~--~~~v---------------~~~~~~-~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~ 388 (512)
+.++|=.+|+.+.++.-. .+.+ .++++- -+...++.+- ....+..||.+.++....+..
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEe
Confidence 678887778777665421 1111 122221 1112233322 123477888877755333221
Q ss_pred CCCCC------C-CCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCC--CCEEEEE
Q 010362 389 PPPLR------G-GDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPK--GEWIYCV 459 (512)
Q Consensus 389 ~~~~~------~-~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--g~~l~~g 459 (512)
..... + ......-..+.-++..-++.++. ++|-+|..+..... .|+..+....+.|+ |--++.+
T Consensus 311 d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~-----~iD~dG~~L~st~~--gHGDa~hv~dldP~r~GlEv~~~ 383 (591)
T 2zux_A 311 DSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSM-----AVDHDGKGMYSTGL--GHGDALHTGDLDPGRPGLEVFQV 383 (591)
T ss_dssp ETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTE-----EECTTSCEEEECSC--CCCSCEEEECCCTTSSSCEEEEE
T ss_pred cCCCCCcccccccCCCCCeeEeCCCCCCceEEEeee-----EECCCCCEeeeCCC--CCCCeeEEeecCCCCCCcEEEEE
Confidence 11110 1 11233333455566666666552 44555555555433 44566667777777 4566666
Q ss_pred eCCC----eEEEEEcCCCeeEEecccc--CCCeEEEEEcCC
Q 010362 460 GEDR----NLYCFSHQSGKLEHLMKVH--EKDVIGVTHHPH 494 (512)
Q Consensus 460 ~~dg----~i~iwd~~~~~~~~~~~~h--~~~v~~v~~~p~ 494 (512)
.+++ -..+.|..+|+.+...... .+......|.|+
T Consensus 384 ~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~ 424 (591)
T 2zux_A 384 HEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPR 424 (591)
T ss_dssp CCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTT
T ss_pred ecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCC
Confidence 6542 3456888999988766432 333334444454
No 397
>3ct5_A Morphogenesis protein 1; cell WALL, hydrolase, infection, late protein; HET: NAG; 1.37A {Bacteriophage phi-29} PDB: 3csz_A* 3csr_A* 3ct0_A* 3ct1_A*
Probab=40.77 E-value=18 Score=28.48 Aligned_cols=31 Identities=13% Similarity=0.249 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHHHhcChHHHHHH-----HHhhcCcc
Q 010362 7 ARDVIKIVLQFCKENSLQQTFQT-----LQNECQVS 37 (512)
Q Consensus 7 ~~e~~~li~q~L~e~G~~~t~~~-----l~~Es~~~ 37 (512)
.++-.+-|++||+..||+..+.+ ++.|||+.
T Consensus 14 ~~~~a~~i~~~l~~~G~s~~~aAGilGN~~~ESg~n 49 (159)
T 3ct5_A 14 MKVNAQYILNYLSSNGWTKQAICGMLGNMQSESTIN 49 (159)
T ss_dssp HHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC
Confidence 45667789999999999987654 89999974
No 398
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=39.95 E-value=3.2e+02 Score=27.83 Aligned_cols=156 Identities=12% Similarity=0.084 Sum_probs=77.6
Q ss_pred cCcceeEEEEcCCC-CeEEEEeCCCeEEEEEccCCeeeEEeccc-----------cccCeEEEEEec-CCCEEEEEeCC-
Q 010362 262 HDETVLCIEFSRDS-EMLASGSQDGKIKVWRIRSGQCLRRLERA-----------HSEGVTSLVFSR-DGSQILSTSFD- 327 (512)
Q Consensus 262 h~~~v~~l~~s~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-----------~~~~i~~~~~~~-~~~~l~~~~~d- 327 (512)
-.+.|.+|+++|.+ ..+..+...|.|...+ +.|+.-..+... ....+.+++++| +...++++...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 45689999999965 5666666566554443 334433333211 224589999988 34455544321
Q ss_pred ----CcEEEE-eCCCCceeEEeeCC-------ccc--eeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceeeecCCCCCC
Q 010362 328 ----STARIH-GLKSGKLLKEFRGH-------SSY--VNDAIFTND-GSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPL 392 (512)
Q Consensus 328 ----g~v~i~-d~~~~~~~~~~~~~-------~~~--v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 392 (512)
....+| ....|+.-...... .+. ...++++|. ...++.++.++.|. .....++.-.........
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~TW~~~~~~~~~ 176 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQTWSRMNQLPDS 176 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSSCEECTTSCCC
T ss_pred ccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcCccccccCccc
Confidence 112333 33334333222210 111 146888874 34555555544332 122223322222211100
Q ss_pred CCCCceeEEEEEcCCCCCeEEEEcCCC
Q 010362 393 RGGDASVNSVHLFPKNPDHIVVCNKTS 419 (512)
Q Consensus 393 ~~~~~~i~~~~~~~~~~~~l~~~~~~~ 419 (512)
......+..+.+.|.++..++++..++
T Consensus 177 ~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 177 STYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCCccceEEEEECCCCCCEEEEEEeCC
Confidence 112245778899988766666666655
No 399
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=37.31 E-value=1.1e+02 Score=26.44 Aligned_cols=88 Identities=17% Similarity=0.211 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHhcC-hHHHHHHHHh--hcCccccccccHHHH--HhhhccCCchhhhhhhccccCChhHHHHHHHHHHHH
Q 010362 9 DVIKIVLQFCKENS-LQQTFQTLQN--ECQVSLNTVDSIETF--VADINSGRWDAILPQVAQLKLPRNKLEDLYEQIVLE 83 (512)
Q Consensus 9 e~~~li~q~L~e~G-~~~t~~~l~~--Es~~~~~~~~~~~~~--~~~i~~g~w~~~~~~l~~~~~~~~~~~~l~~~~~~e 83 (512)
+.++++.+++...| +.++...|++ +.++.-+. ..+.-. .-....|++++++..+.. +... .++-....-
T Consensus 66 ~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~-~~~~~~la~~~~~~g~~~~Al~~l~~---~~~~--~~~~~l~~~ 139 (291)
T 3mkr_A 66 QAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTN-TTFLLMAASIYFYDQNPDAALRTLHQ---GDSL--ECMAMTVQI 139 (291)
T ss_dssp HHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSC-HHHHHHHHHHHHHTTCHHHHHHHHTT---CCSH--HHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCC-HHHHHHHHHHHHHCCCHHHHHHHHhC---CCCH--HHHHHHHHH
Confidence 45566677777766 7777777766 22321111 111111 222356888888887776 2211 111112223
Q ss_pred HHHcCChHHHHHHHHhcch
Q 010362 84 MIELRELDTARAILRQTQA 102 (512)
Q Consensus 84 ~l~~~~~~~a~~~lr~~~~ 102 (512)
++..++..+|...+++.+.
T Consensus 140 ~~~~g~~~~A~~~l~~~~~ 158 (291)
T 3mkr_A 140 LLKLDRLDLARKELKKMQD 158 (291)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHh
Confidence 5566777888777776543
No 400
>4asv_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; chaperone, membrane, tail-anchored, post-translational targe; NMR {Saccharomyces cerevisiae} PDB: 4asw_A
Probab=36.91 E-value=21 Score=24.63 Aligned_cols=19 Identities=0% Similarity=0.303 Sum_probs=15.6
Q ss_pred cccchhhHHHHHHHHHHhc
Q 010362 3 LEIEARDVIKIVLQFCKEN 21 (512)
Q Consensus 3 ~~~~~~e~~~li~q~L~e~ 21 (512)
|..++.++...|+|||+..
T Consensus 15 ~~~skKrLA~sIIdFL~~s 33 (92)
T 4asv_A 15 MSASKEEIAALIVNYFSSI 33 (92)
T ss_dssp CCCCHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHh
Confidence 4556888999999999864
No 401
>2nxp_A Transcription initiation factor TFIID subunit 5; transcription factor, TAF5; 2.17A {Homo sapiens} SCOP: d.379.1.1
Probab=36.14 E-value=43 Score=26.15 Aligned_cols=48 Identities=13% Similarity=0.162 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHHHcCChHHHHHHHHhcchhhhcccCChHHHHHHHHH
Q 010362 71 NKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 120 (512)
Q Consensus 71 ~~~~~l~~~~~~e~l~~~~~~~a~~~lr~~~~~~~~~~~~~~~~~~l~~l 120 (512)
.++|=++-+.|++|+..+...+|..++++-.... ...+.+..+.|..+
T Consensus 51 ~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~--~~~~~~~i~~L~~i 98 (156)
T 2nxp_A 51 QLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQ--ECYYQDDLRVLSSL 98 (156)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGS--CGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhHHh--HHHHHHHHHHHhcC
Confidence 4577799999999999999999999998765442 33345555555433
No 402
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.42 E-value=30 Score=23.70 Aligned_cols=22 Identities=5% Similarity=0.223 Sum_probs=18.3
Q ss_pred HHHHHHhcChHHHHHHHHhhcCc
Q 010362 14 VLQFCKENSLQQTFQTLQNECQV 36 (512)
Q Consensus 14 i~q~L~e~G~~~t~~~l~~Es~~ 36 (512)
+..||++.||.+ +..|-++..|
T Consensus 27 VadWLkk~g~~~-cd~lv~Kh~I 48 (90)
T 2eap_A 27 LADYFKKLNYKD-CEKAVKKYHI 48 (90)
T ss_dssp HHHHHHHTTCHH-HHHHHHHTTC
T ss_pred HHHHHHHcCCch-HHHHHHHhcc
Confidence 468999999999 8998766655
No 403
>1kdl_A YOPD protein; yersinia, amphipathic alpha helix, beta turn, structural protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=35.33 E-value=23 Score=17.53 Aligned_cols=13 Identities=23% Similarity=0.705 Sum_probs=9.7
Q ss_pred hhHHHHHHHHHHh
Q 010362 8 RDVIKIVLQFCKE 20 (512)
Q Consensus 8 ~e~~~li~q~L~e 20 (512)
.||++||-||-+.
T Consensus 5 kDvlql~qQy~qs 17 (26)
T 1kdl_A 5 KDVLRLIEQYVSS 17 (26)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHH
Confidence 4788888888654
No 404
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=35.18 E-value=76 Score=23.98 Aligned_cols=91 Identities=10% Similarity=0.078 Sum_probs=48.5
Q ss_pred HHHHHHHhcChHHHHHHHHhhcCccccccccHHHH-HhhhccCCchhhhhhhccc-cCChhHHHHHHHHHHHHHHHcCCh
Q 010362 13 IVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETF-VADINSGRWDAILPQVAQL-KLPRNKLEDLYEQIVLEMIELREL 90 (512)
Q Consensus 13 li~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~~-~~~i~~g~w~~~~~~l~~~-~~~~~~~~~l~~~~~~e~l~~~~~ 90 (512)
+-..++...-|.++...|++=-.+.-+.......+ .-....|+|++++..+... .+.++.. ..+-..-.-+...++.
T Consensus 27 ~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~-~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 27 LAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP-RFPFHAAECLLQXGEL 105 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT-HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc-hHHHHHHHHHHHcCCH
Confidence 34455666778888888776433322211111000 1224569999988866543 2222111 1112222335677889
Q ss_pred HHHHHHHHhcchhh
Q 010362 91 DTARAILRQTQAMG 104 (512)
Q Consensus 91 ~~a~~~lr~~~~~~ 104 (512)
.+|+..+++.+...
T Consensus 106 ~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 106 AEAESGLFLAQELI 119 (148)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC
Confidence 99998888766543
No 405
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=33.00 E-value=23 Score=25.28 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=19.0
Q ss_pred ccchhhHHHHHHHHHHhcChH
Q 010362 4 EIEARDVIKIVLQFCKENSLQ 24 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~ 24 (512)
+++|.||++.|++|-+++++.
T Consensus 34 ~~sR~eVvk~lW~YIK~nnLQ 54 (101)
T 1v32_A 34 MISRYDVSDTIAKYISKEGLL 54 (101)
T ss_dssp CCCHHHHHHHHHHHHHHHTCB
T ss_pred ccCHHHHHHHHHHHHHhhcCc
Confidence 478999999999999999965
No 406
>1lxj_A YBL001C, hypothetical 11.5KDA protein in HTB2-NTH2 interge region; hypothetical protein, HTB2-NTH2 intergenic region; 1.80A {Saccharomyces cerevisiae} SCOP: d.58.48.1
Probab=32.11 E-value=8.1 Score=27.82 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=21.3
Q ss_pred HHHHHHHhhcCccccccccHHHHHhhhccCCchhhhhhhc
Q 010362 25 QTFQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQVA 64 (512)
Q Consensus 25 ~t~~~l~~Es~~~~~~~~~~~~~~~~i~~g~w~~~~~~l~ 64 (512)
..+..+-+|||+++.. ..+. . +.+|+|+++.+.++
T Consensus 27 a~~i~~i~~sGl~y~~-~pm~---T-~IEGe~devm~vv~ 61 (104)
T 1lxj_A 27 ALIEKKIRESPLKSTL-HSAG---T-TIEGPWDDVMGLIG 61 (104)
T ss_dssp HHHHHHHHTSSSEEEE-ETTE---E-EEEEEHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEe-CCCc---c-EEEcCHHHHHHHHH
Confidence 3344444578887764 2222 1 66799999887443
No 407
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=30.95 E-value=98 Score=22.92 Aligned_cols=90 Identities=11% Similarity=0.105 Sum_probs=45.7
Q ss_pred HHHHHHHhcChHHHHHHHHhhcCccccccccHHHH-HhhhccCCchhhhhhhccc-cCChhHHHHHHHHHHHHHHHcCCh
Q 010362 13 IVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETF-VADINSGRWDAILPQVAQL-KLPRNKLEDLYEQIVLEMIELREL 90 (512)
Q Consensus 13 li~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~~-~~~i~~g~w~~~~~~l~~~-~~~~~~~~~l~~~~~~e~l~~~~~ 90 (512)
+-..+++..-|.++...|++=-...-+.......+ .-....|++++++..+... .+.++.. ..+-..-.-+...++.
T Consensus 24 ~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 24 LGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEP-RFPFHAAECHLQLGDL 102 (142)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT-HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc-HHHHHHHHHHHHcCCH
Confidence 33555666678888877766433322211101000 1123568888887765542 2211111 1111222235567888
Q ss_pred HHHHHHHHhcchh
Q 010362 91 DTARAILRQTQAM 103 (512)
Q Consensus 91 ~~a~~~lr~~~~~ 103 (512)
..|+..+++.+..
T Consensus 103 ~~A~~~~~~al~~ 115 (142)
T 2xcb_A 103 DGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8888888776554
No 408
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=30.77 E-value=57 Score=25.29 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=43.0
Q ss_pred chhhHHHHHHHHHHhc--ChH-----HHHHHHHhhcCccccccccH-----HHHHhhhccCCchhhhhhhc
Q 010362 6 EARDVIKIVLQFCKEN--SLQ-----QTFQTLQNECQVSLNTVDSI-----ETFVADINSGRWDAILPQVA 64 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~--G~~-----~t~~~l~~Es~~~~~~~~~~-----~~~~~~i~~g~w~~~~~~l~ 64 (512)
|+++++.+ .+.|.+. ||+ -|+..|+++.|+..+....+ ..+-..|.+|+.+-+++.-.
T Consensus 22 dK~~~v~~-ak~~~~ll~Gf~l~AT~gTa~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~geIdlVInt~~ 91 (152)
T 1b93_A 22 CKQMLMSW-VERHQPLLEQHVLYATGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWD 91 (152)
T ss_dssp GHHHHHHH-HHHTHHHHTTSEEEEETTHHHHHHHHHCCCCEEECCGGGTHHHHHHHHHHTTCCCEEEEECC
T ss_pred hHHHHHHH-HHHHHHHhCCCEEEEccHHHHHHHHHhCceeEEEEecCCCCCchHHHHHHCCCccEEEEcCC
Confidence 56666654 5566777 884 79999999899987643322 24788899999999999766
No 409
>2ibo_A Hypothetical protein SP2199; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Streptococcus pneumoniae TIGR4} SCOP: d.58.48.1
Probab=30.76 E-value=9.1 Score=27.53 Aligned_cols=30 Identities=13% Similarity=0.326 Sum_probs=19.1
Q ss_pred HHhhcCccccccccHHHHHhhhccCCchhhhhhhc
Q 010362 30 LQNECQVSLNTVDSIETFVADINSGRWDAILPQVA 64 (512)
Q Consensus 30 l~~Es~~~~~~~~~~~~~~~~i~~g~w~~~~~~l~ 64 (512)
.-+|||+++.. ..+. . +.+|+|+++.+.++
T Consensus 28 vl~~sGl~y~~-~pmg---T-~IEGe~devm~vv~ 57 (104)
T 2ibo_A 28 YLQTQEVTMVV-TPFE---T-VLEGEFDELMRILK 57 (104)
T ss_dssp HHHHSSSEEEE-CSSC---E-EEEEEHHHHHHHHH
T ss_pred HHHHcCCCeEe-cCCc---c-EEEcCHHHHHHHHH
Confidence 33479998764 2222 1 66799999888443
No 410
>1yqh_A DUF77, IG hypothetical 16092; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Bacillus cereus atcc 14579} SCOP: d.58.48.1
Probab=30.63 E-value=10 Score=27.51 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=19.0
Q ss_pred HHhhcCccccccccHHHHHhhhccCCchhhhhhhc
Q 010362 30 LQNECQVSLNTVDSIETFVADINSGRWDAILPQVA 64 (512)
Q Consensus 30 l~~Es~~~~~~~~~~~~~~~~i~~g~w~~~~~~l~ 64 (512)
.-+|||+++.. ..+. . +.+|+|+++...++
T Consensus 33 vl~~sGl~y~~-~pmg---T-~IEGe~devm~vv~ 62 (109)
T 1yqh_A 33 VVQQSGVRYEV-GAME---T-TLEGELDVLLDVVK 62 (109)
T ss_dssp HHHHSCSEEEE-CSSC---E-EEEECHHHHHHHHH
T ss_pred HHHHcCCCeEe-cCCc---c-EEEcCHHHHHHHHH
Confidence 33479987764 2222 1 66799999887443
No 411
>1rij_A E6APN1 peptide; Trp-CAGE, E6-binding domain, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.32.1.1
Probab=30.59 E-value=31 Score=16.46 Aligned_cols=12 Identities=17% Similarity=0.307 Sum_probs=8.9
Q ss_pred HHHHHHHHHhcC
Q 010362 11 IKIVLQFCKENS 22 (512)
Q Consensus 11 ~~li~q~L~e~G 22 (512)
-.|+.|+|++-|
T Consensus 3 qellgqwlkdgg 14 (26)
T 1rij_A 3 QELLGQWLKDGG 14 (26)
T ss_dssp HHHHHHHHHTTG
T ss_pred HHHHHHHHHcCC
Confidence 357788888876
No 412
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=30.56 E-value=18 Score=23.15 Aligned_cols=18 Identities=0% Similarity=0.379 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHhcChHH
Q 010362 8 RDVIKIVLQFCKENSLQQ 25 (512)
Q Consensus 8 ~e~~~li~q~L~e~G~~~ 25 (512)
.|+..||.+.|+.+||++
T Consensus 63 kelleliarllqklgykd 80 (96)
T 2jvf_A 63 KELLELIARLLQKLGYKD 80 (96)
T ss_dssp HHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 578999999999999973
No 413
>3him_A Probable transcriptional regulator; TETR, bacterial, RHA1, PSI-2, MCSG, structural midwest center for structural genomics; 2.20A {Rhodococcus jostii}
Probab=30.27 E-value=58 Score=26.19 Aligned_cols=59 Identities=10% Similarity=0.150 Sum_probs=44.2
Q ss_pred chhhHHHHHHHHHHhcChHH-HHHHHHhhcCccc----cccccHHHHHhhhccCCchhhhhhhc
Q 010362 6 EARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSL----NTVDSIETFVADINSGRWDAILPQVA 64 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~----~~~~~~~~~~~~i~~g~w~~~~~~l~ 64 (512)
.|++|+..-.+-+.+.||.. |...+-+++|++- ....+.+.+..++..--++.....+.
T Consensus 17 ~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~Y~~F~sK~~Ll~~~~~~~~~~~~~~~~ 80 (211)
T 3him_A 17 AAARIRAAAIEVFAAKGYGATTTREIAASLDMSPGAVYPHYKTKESLLYAISLEGHHSVLAAIT 80 (211)
T ss_dssp HHHHHHHHHHHHHHHHCSTTCCHHHHHHHTTCCTTSSTTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCCcChhhhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999997 9999999999963 33456667777676665555544433
No 414
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=29.51 E-value=4e+02 Score=25.90 Aligned_cols=279 Identities=11% Similarity=0.103 Sum_probs=139.5
Q ss_pred CcCceEEEEECCCCC-EEEEEeCCCe----------------------------EEEEEcCCCeeeccccccccc-eee-
Q 010362 212 TKSHAECARFSPDGQ-FLVSCSFDGF----------------------------IEVWDYLSGKLKKDLQYQADE-TFM- 260 (512)
Q Consensus 212 h~~~v~~~~~s~~~~-~l~sg~~dg~----------------------------i~iwd~~~~~~~~~~~~~~~~-~~~- 260 (512)
|-..+....|.-||+ -++....+|+ +.|+|-.+|+......+.+.. ...
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg~~~~ 256 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVSD 256 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCCGGG
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCCcccc
Confidence 445577777777775 4666666665 778887788777665543211 000
Q ss_pred -----ccC--cceeEEEEcC-CCCeEEEEe---CCCeEEEEEccCCeeeEEec--cccc----------cCeEEEEEecC
Q 010362 261 -----MHD--ETVLCIEFSR-DSEMLASGS---QDGKIKVWRIRSGQCLRRLE--RAHS----------EGVTSLVFSRD 317 (512)
Q Consensus 261 -----~h~--~~v~~l~~s~-~~~~l~s~~---~dg~i~vwd~~~~~~~~~~~--~~~~----------~~i~~~~~~~~ 317 (512)
++. .-..++++-. +...++.+- ....+..||..+++...... .... ..+.-..+.-|
T Consensus 257 WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgD 336 (591)
T 2zux_A 257 WGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGD 336 (591)
T ss_dssp GTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSS
T ss_pred cccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCC
Confidence 000 0122333321 222333332 12358889988886544332 1110 12233333334
Q ss_pred CC-EEEEEeCCCcEEEEeCCCCceeEEe-eCCccceeEEEEcCC--CCEEEEEeCCC----cEEEEeCCCCceeeecCCC
Q 010362 318 GS-QILSTSFDSTARIHGLKSGKLLKEF-RGHSSYVNDAIFTND--GSRVVTASSDC----TVKVWDLKSTDCLQTFKPP 389 (512)
Q Consensus 318 ~~-~l~~~~~dg~v~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~--~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~ 389 (512)
|+ -|+.|+. ++| ..|+.+... .+|...+.-..|.|+ |..++.+.+++ -..+.|.++++.+......
T Consensus 337 G~dEIv~Gs~-----~iD-~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~ 410 (591)
T 2zux_A 337 GKDEIIFGSM-----AVD-HDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAG 410 (591)
T ss_dssp SSCEEEETTE-----EEC-TTSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCS
T ss_pred CCceEEEeee-----EEC-CCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCC
Confidence 42 2333321 222 233333332 268777777778886 44677666542 3557899999988776532
Q ss_pred CCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecCCeEEEEeeCCcccCCcEEEEEECCCCC-EEEEEeCCCeEEEE
Q 010362 390 PPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGE-WIYCVGEDRNLYCF 468 (512)
Q Consensus 390 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~dg~i~iw 468 (512)
...+......+.|+.+..-+-+ ++ .+++..++.+..... ...-..+-|..|.. .++- .+.|.-|
T Consensus 411 ----~d~Gr~~~~Didp~~pG~E~w~--~~--~l~~~~G~~i~~~~p----~~~N~~i~WdGDl~relld---~~~i~k~ 475 (591)
T 2zux_A 411 ----KDVGRGMAADIDPRYPGQEVWA--NG--SLYSAKGVKIGSGVP----SSTNFGIWWDGDLLREQLD---SNRIDKW 475 (591)
T ss_dssp ----SCCCCEEEECCCTTSSSCEEEE--TT--EEECTTSCBCSSCCC----SCCSEEECCSSSSSCEEEE---TTEEEEE
T ss_pred ----CCCCceeEEecCCCCCceEEEe--cC--ceECCCCCEecCCCC----CCcceeEEECCCCcHhhhC---CceEEec
Confidence 2344555555667654333333 22 567777665432211 11122455666653 3332 2478889
Q ss_pred EcCCCeeEE--eccc-------cCCCeEEEEEcCCC--CeEEEEECCCeEEEec
Q 010362 469 SHQSGKLEH--LMKV-------HEKDVIGVTHHPHR--NLLATYGEDCTMKLWK 511 (512)
Q Consensus 469 d~~~~~~~~--~~~~-------h~~~v~~v~~~p~~--~~l~s~~~dg~i~iW~ 511 (512)
+..+++... ++.+ ...+...-.+--|. .+|.-..++..++||-
T Consensus 476 ~~~~~~~~~l~~~~g~~snngtk~~P~l~aDi~GDwREEvI~~t~D~~~LrIYt 529 (591)
T 2zux_A 476 DYQNGVSKNMLTASGAAANNGTKATPTLQADLLGDWREEVVWRTEDSSALRIYT 529 (591)
T ss_dssp ETTTTEEEEEEECTTEECBSGGGCBCSEEECCSSSSSCEEEEEETTSSEEEEEC
T ss_pred ccCCCceeEEEeecccccCCCCCCCEeeEEeccccCeeEEEEEeCCCCeEEEEe
Confidence 887776333 3322 11122233333332 2444344555688873
No 415
>2epi_A UPF0045 protein MJ1052; NPPSFA, national project on protein structural and functiona analyses; 1.70A {Methanocaldococcus jannaschii} PDB: 2eky_A
Probab=29.04 E-value=9.3 Score=27.25 Aligned_cols=34 Identities=15% Similarity=0.288 Sum_probs=20.7
Q ss_pred HHHHHhhcCccccccccHHHHHhhhccCCchhhhhhhcc
Q 010362 27 FQTLQNECQVSLNTVDSIETFVADINSGRWDAILPQVAQ 65 (512)
Q Consensus 27 ~~~l~~Es~~~~~~~~~~~~~~~~i~~g~w~~~~~~l~~ 65 (512)
+...-+|||+++.. ..+. . +.+|+|+++.+.++.
T Consensus 29 ~i~~l~~sGl~y~~-~pm~---T-~IEGe~devm~vv~~ 62 (100)
T 2epi_A 29 AIEVFKKYDLKVET-NAMG---T-VLEGDLDEILKAFKE 62 (100)
T ss_dssp HHHHHTTSSCEEEE-ETTE---E-EEEEEHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEe-cCCc---c-EEEcCHHHHHHHHHH
Confidence 33334579998764 2222 1 667999998884433
No 416
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=28.99 E-value=3.7e+02 Score=25.26 Aligned_cols=154 Identities=10% Similarity=0.097 Sum_probs=0.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCC-----ceeeecCCCCCCCCCCceeEEEEEcCC--------CCCeEEEEcCCC
Q 010362 353 DAIFTNDGSRVVTASSDCTVKVWDLKST-----DCLQTFKPPPPLRGGDASVNSVHLFPK--------NPDHIVVCNKTS 419 (512)
Q Consensus 353 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~l~~~~~~~ 419 (512)
+..++ +..+....+.+ .+.||..... ..-..++.+..-..+.....++.+.+. .+..+++.. +|
T Consensus 42 sg~i~-~~GyAlvv~~~-~l~VW~y~~~~~~~~~~c~~lpLp~sd~~~~~~lvsi~~~~~~~~~~s~~~pGlliVsp-tG 118 (450)
T 1xks_A 42 TINID-EGGWACLVCKE-KLIIWKIALSPITKLSVCKELQLPPSDFHWSADLVALSYSSPSGEAHSTQAVAVMVATR-EG 118 (450)
T ss_dssp EEEEC-TTSEEEEEETT-EEEEEECCSSCCGGGCCEEEEECCCCSSCCCGGGEEEEECC-------CTTEEEEEECT-TC
T ss_pred EEEEC-CCcEEEEEeCC-eEEEEeecCCCCCCcccceeccCCccccccCCcEEEEEcCCCccccccCCCceEEEEcC-Cc
Q ss_pred cEEEEecCCeEEEEeeCCcccCC-cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCeeEEeccccCCCe------------
Q 010362 420 SIYIMTLQGQVVKSFSSGKREGG-DFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDV------------ 486 (512)
Q Consensus 420 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~g~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v------------ 486 (512)
.|+.|..-..........-.-.+ .........++.-++.+..-|++....++ |++.-..+.-..+.
T Consensus 119 ~VryWesIs~~~~~~ei~~~L~~~E~vt~l~n~epaGfIlaTStgrl~~lsir-Gkp~l~~~~l~~~~G~l~gi~~~~sS 197 (450)
T 1xks_A 119 SIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIPE-SSGKIHQHILPQGQGMLSGIGRKVSS 197 (450)
T ss_dssp EEEEESCTTCTTCCEEEECC----CCEEEEEEETTTEEEEEETTCCEEEEEEC-TTSCEEEEECTTCCCC----------
T ss_pred cEEEccccCCCCceEEEEecCCCCceEEEEeecCCceEEEEeccceEEEEEec-CCceEEEEEecCCCcccccccccccc
Q ss_pred -------------EEEEEcCCCCeEEEEECCCeEEEec
Q 010362 487 -------------IGVTHHPHRNLLATYGEDCTMKLWK 511 (512)
Q Consensus 487 -------------~~v~~~p~~~~l~s~~~dg~i~iW~ 511 (512)
.++.++..++.+++.+..+ +..|+
T Consensus 198 l~G~~s~~~~ia~v~~~~~~g~r~v~ilT~~~-lq~W~ 234 (450)
T 1xks_A 198 LFGILSPSSDLTLSSVLWDRERSSFYSLTSSN-ISKWE 234 (450)
T ss_dssp --------CCCCEEEEEEETTTTEEEEEESSE-EEEEE
T ss_pred cccccCCCcceEEEEeccCCCcEEEEEEcCCc-eEEEE
No 417
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=28.96 E-value=95 Score=22.12 Aligned_cols=93 Identities=13% Similarity=0.032 Sum_probs=49.3
Q ss_pred HHHHHHHHHhcChHHHHHHHHhhcCccccccc--cH--HHHHhhhccCCchhhhhhhccc-cC-Chh-HHHHHHHHHHHH
Q 010362 11 IKIVLQFCKENSLQQTFQTLQNECQVSLNTVD--SI--ETFVADINSGRWDAILPQVAQL-KL-PRN-KLEDLYEQIVLE 83 (512)
Q Consensus 11 ~~li~q~L~e~G~~~t~~~l~~Es~~~~~~~~--~~--~~~~~~i~~g~w~~~~~~l~~~-~~-~~~-~~~~l~~~~~~e 83 (512)
..+-..++...-|.++...|++=-...-+... .. ..=......|+|++++..+... .. |.. .....+-..-.-
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~ 85 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLS 85 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHH
Confidence 44455667777788888887764322211110 01 1112235679999988876543 11 111 111122222223
Q ss_pred HHHcCChHHHHHHHHhcchh
Q 010362 84 MIELRELDTARAILRQTQAM 103 (512)
Q Consensus 84 ~l~~~~~~~a~~~lr~~~~~ 103 (512)
+...++.+.|...+++.+..
T Consensus 86 ~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 86 QYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHH
Confidence 45678899998888865543
No 418
>2yu0_A Interferon-activable protein 205; PAAD_dapin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.91 E-value=86 Score=21.89 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=22.5
Q ss_pred CccccchhhHHHHHH-------------HHHHhcC-hHHHHHHHHhhc
Q 010362 1 MTLEIEARDVIKIVL-------------QFCKENS-LQQTFQTLQNEC 34 (512)
Q Consensus 1 ~~~~~~~~e~~~li~-------------q~L~e~G-~~~t~~~l~~Es 34 (512)
|..++||-++.-+|. ..|++.| +.+.|..|++|-
T Consensus 39 ~le~~dridiAdlmv~~y~~~~~l~~li~v~~~i~~l~~~a~~Lk~ek 86 (94)
T 2yu0_A 39 NQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKER 86 (94)
T ss_dssp CSSSCCHHHHHHHHHHHCTTTTTHHHHHHHHHHSTTTHHHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHccchhHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345566777766654 4566677 777777777774
No 419
>1lxn_A Hypothetical protein MTH1187; hypothetical structure, structural genomics, PSI, protein ST initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.48.1
Probab=27.63 E-value=12 Score=26.68 Aligned_cols=36 Identities=8% Similarity=0.115 Sum_probs=22.0
Q ss_pred HHHHHHHHhhcCccccccccHHHHHhhhccC-Cchhhhhhhc
Q 010362 24 QQTFQTLQNECQVSLNTVDSIETFVADINSG-RWDAILPQVA 64 (512)
Q Consensus 24 ~~t~~~l~~Es~~~~~~~~~~~~~~~~i~~g-~w~~~~~~l~ 64 (512)
-..+..+-+|||+++.. ..+. . +.+| +|+++.+.++
T Consensus 22 Va~~i~~i~~sgl~y~~-~pm~---T-~iEG~e~devm~vv~ 58 (99)
T 1lxn_A 22 VAAAVEALKKLNVRYEI-SGMG---T-LLEAEDLDELMEAVK 58 (99)
T ss_dssp HHHHHHHHTTSSCEEEE-ETTE---E-EEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEe-CCCe---e-EEECCCHHHHHHHHH
Confidence 33444445589988764 2222 1 6679 9999887443
No 420
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=27.54 E-value=3.2e+02 Score=24.12 Aligned_cols=116 Identities=17% Similarity=0.176 Sum_probs=54.2
Q ss_pred HHHHHhhhccCCchhhhhhhccccCChhHHHHHHHHHHHHHHHcCChHHHHHHHHhcchhhhcccCChHHHHHHHHHhcc
Q 010362 44 IETFVADINSGRWDAILPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVR 123 (512)
Q Consensus 44 ~~~~~~~i~~g~w~~~~~~l~~~~~~~~~~~~l~~~~~~e~l~~~~~~~a~~~lr~~~~~~~~~~~~~~~~~~l~~ll~~ 123 (512)
.++|++.|.+|++=+|-+ .++-++..++.+++..+|+.+|.+-.... +...+..--.+|..++..
T Consensus 17 l~rl~~~I~~G~yYEAhQ--------------~~Rtl~~Ry~~~~~~~eAidlL~~ga~~l-l~~~Q~~sa~DLa~llve 81 (312)
T 2wpv_A 17 LQRFENKIKAGDYYEAHQ--------------TLRTIANRYVRSKSYEHAIELISQGALSF-LKAKQGGSGTDLIFYLLE 81 (312)
T ss_dssp HHHHHHHHHHTCHHHHHH--------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccChHHHHH--------------HHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHCCCcchHHHHHHHHHH
Confidence 456677677776655554 33344555556666666666665422211 122223333344333322
Q ss_pred cCCCccccccCChhhHHHHHHHHHHhccccccCchHHHHHHHHHHHhhhhcCCCCCC
Q 010362 124 TYFDAHEAYQDSTKERRRAQIAQAIAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG 180 (512)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rl~~l~~~~~~~~~~~~~~~~~ 180 (512)
.+..... ...+..+.++++.+.... ...+. ...++..+++|....+-.+.|
T Consensus 82 v~~~~~~----~~~~~~~~rl~~l~~~~p-~~~~~-r~~fi~~ai~WS~~~g~~~~G 132 (312)
T 2wpv_A 82 VYDLAEV----KVDDISVARLVRLIAELD-PSEPN-LKDVITGMNNWSIKFSEYKFG 132 (312)
T ss_dssp HHHHTTC----CCSHHHHHHHHHHHTTCC-TTCTT-HHHHHHHHHHHHHHTSSCTTC
T ss_pred HHHHcCC----CCCHHHHHHHHHHHHHCC-CCCch-HHHHHHHHHHHHhhcCCCCCC
Confidence 1111110 111233444443333221 11222 467888899998876554443
No 421
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=27.43 E-value=1.5e+02 Score=20.21 Aligned_cols=92 Identities=8% Similarity=0.046 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhcChHHHHHHHHhhcCccccccccHHH-HHhhhccCCchhhhhhhccc-cCChhHHHHHHHHHHHHHHHc
Q 010362 10 VIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIET-FVADINSGRWDAILPQVAQL-KLPRNKLEDLYEQIVLEMIEL 87 (512)
Q Consensus 10 ~~~li~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~-~~~~i~~g~w~~~~~~l~~~-~~~~~~~~~l~~~~~~e~l~~ 87 (512)
...+...++...-|.++...|++=-...-+....... =.-....|+|++++..+... ...+.. ..++-..-.-+...
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~~~~ 85 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW-GKGYSRKAAALEFL 85 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHHH
Confidence 3445566667777888888777643332111111100 11123468898888766543 121111 11222222334567
Q ss_pred CChHHHHHHHHhcch
Q 010362 88 RELDTARAILRQTQA 102 (512)
Q Consensus 88 ~~~~~a~~~lr~~~~ 102 (512)
++...|...+++.+.
T Consensus 86 ~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 86 NRFEEAKRTYEEGLK 100 (118)
T ss_dssp TCHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHH
Confidence 888888888876543
No 422
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=26.95 E-value=37 Score=20.64 Aligned_cols=14 Identities=14% Similarity=0.444 Sum_probs=11.4
Q ss_pred hhHHHHHHHHHHhc
Q 010362 8 RDVIKIVLQFCKEN 21 (512)
Q Consensus 8 ~e~~~li~q~L~e~ 21 (512)
.++...|+|||+..
T Consensus 3 K~la~sIi~FL~~~ 16 (52)
T 4gof_A 3 KRLAYAIIQFLHDQ 16 (52)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHh
Confidence 46899999999763
No 423
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=26.83 E-value=35 Score=23.83 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=19.4
Q ss_pred ccchhhHHHHHHHHHHhcChHH
Q 010362 4 EIEARDVIKIVLQFCKENSLQQ 25 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~ 25 (512)
+.+|.||++.|++|-+++++.+
T Consensus 26 ~~sr~evvk~lW~YIK~n~Lqd 47 (93)
T 1v31_A 26 VETRPRIIAAIWHYVKARKLQN 47 (93)
T ss_dssp EECSHHHHHHHHHHHHHTTCBC
T ss_pred ccCHHHHHHHHHHHHHHccCcC
Confidence 5789999999999999999653
No 424
>3s5r_A Transcriptional regulator TETR family; DNA/RNA-binding 3-helical bundle, tetracyclin repressor-like structural genomics; 2.60A {Syntrophus aciditrophicus}
Probab=26.78 E-value=1e+02 Score=24.74 Aligned_cols=61 Identities=10% Similarity=0.134 Sum_probs=46.4
Q ss_pred ccchhhHHHHHHHHHHhcChHH-HHHHHHhhcCccc----cccccHHHHHhhhccCCchhhhhhhc
Q 010362 4 EIEARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSL----NTVDSIETFVADINSGRWDAILPQVA 64 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~----~~~~~~~~~~~~i~~g~w~~~~~~l~ 64 (512)
+-.|++|+..-.+-+.+.||.. |...+-+++|++- ....+.+.+..+++...++.....+.
T Consensus 9 ~~~r~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~Y~~F~sK~~L~~~~~~~~~~~~~~~~~ 74 (216)
T 3s5r_A 9 KNTRELLLDAATTLFAEQGIAATTMAEIAASVGVNPAMIHYYFKTRDSLLDTIIEERIGRIIDMIW 74 (216)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTTCCHHHHHHTTTCCHHHHHHHCSSHHHHHHHHHHHTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHCCCHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3457889999999999999996 9999999999953 33456667777777766666655543
No 425
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=26.36 E-value=1.7e+02 Score=20.57 Aligned_cols=95 Identities=6% Similarity=0.034 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHhcChHHHHHHHHhhcCccccccccHHH-HHhhhccCCchhhhhhhccc-cCChhHHHHHHHHHHHHHH
Q 010362 8 RDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIET-FVADINSGRWDAILPQVAQL-KLPRNKLEDLYEQIVLEMI 85 (512)
Q Consensus 8 ~e~~~li~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~-~~~~i~~g~w~~~~~~l~~~-~~~~~~~~~l~~~~~~e~l 85 (512)
.....+-..++...-|.++...|++=-...-+....... -.-....|+|++++..+... ...+.. ...+-..-.-+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~~ 95 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF-IKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHH
Confidence 445556666777778888888887755443222111111 11124568998888866543 221111 112222223355
Q ss_pred HcCChHHHHHHHHhcchh
Q 010362 86 ELRELDTARAILRQTQAM 103 (512)
Q Consensus 86 ~~~~~~~a~~~lr~~~~~ 103 (512)
..++...|+..+++.+..
T Consensus 96 ~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 96 AMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHh
Confidence 678888998888765543
No 426
>2hxo_A Putative TETR-family transcriptional regulator; TETR transcriptional regulator, structural genomics, PSI-2, structure initiative; 2.40A {Streptomyces coelicolor}
Probab=26.21 E-value=1.3e+02 Score=25.08 Aligned_cols=57 Identities=7% Similarity=0.123 Sum_probs=42.7
Q ss_pred ccchhhHHHHHHHHHHhcChHH-HHHHHHhhcCccc----cccccHHHHHhhhccCCchhhh
Q 010362 4 EIEARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSL----NTVDSIETFVADINSGRWDAIL 60 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~----~~~~~~~~~~~~i~~g~w~~~~ 60 (512)
..+|++|+..-++-+.+.||.. |...+-++.|++- ....+.+.+..++.+--+....
T Consensus 15 ~~~r~~Il~aA~~l~~~~G~~~~s~~~IA~~aGvs~~tlY~hF~~K~~Ll~~~~~~~~~~~~ 76 (237)
T 2hxo_A 15 PLSRERIVGAAVELLDTVGERGLTFRALAERLATGPGAIYWHITGKAELLGAATDAVVTAAV 76 (237)
T ss_dssp -CCHHHHHHHHHHHHHHTTTTTCCHHHHHHHHTSCGGGGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhcCcccCCHHHHHHHHCCChHHHHHhcCCHHHHHHHHHHHHHHHhh
Confidence 4678999999999999999998 9999999999953 3345566666666554444433
No 427
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=25.51 E-value=36 Score=23.79 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=19.6
Q ss_pred ccchhhHHHHHHHHHHhcChHH
Q 010362 4 EIEARDVIKIVLQFCKENSLQQ 25 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~ 25 (512)
+.+|.||++.|++|-+++++.+
T Consensus 26 ~~sr~evvk~lW~YIK~n~Lqd 47 (93)
T 1uhr_A 26 TQTRPVIIQALWQYIKTHKLQD 47 (93)
T ss_dssp EEEHHHHHHHHHHHHHHTTCBC
T ss_pred ccCHHHHHHHHHHHHHhccCCC
Confidence 5689999999999999999764
No 428
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=24.86 E-value=5.4e+02 Score=25.82 Aligned_cols=78 Identities=12% Similarity=0.143 Sum_probs=44.3
Q ss_pred cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecC-CCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEEEecC
Q 010362 349 SYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFK-PPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYIMTLQ 427 (512)
Q Consensus 349 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~~~~~ 427 (512)
..|..+....++.+++.++..|.++.-.+........-. ....+. ....+..+....++...++..+.+|....++..
T Consensus 554 e~i~~~~~~~~~~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~-~~d~lv~~~~~~~~~~~v~l~t~~g~~lrf~~~ 632 (716)
T 1zvu_A 554 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP-ENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 632 (716)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC-TTCCBCCCEECCCTTCEEEEEETTSEEEEEEST
T ss_pred CeEEEEEEecCCceEEEEeCCceEEEecHHHhcccCccceEEEeeC-CCCEEEEEEEecCCCCEEEEEeCCCeEEEEEHH
Confidence 345555444467788899999999988765322111000 000011 123333444443344678888889988888775
No 429
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=24.78 E-value=2.3e+02 Score=26.70 Aligned_cols=16 Identities=6% Similarity=-0.018 Sum_probs=14.7
Q ss_pred hhHHHHHHHHHHhcCh
Q 010362 8 RDVIKIVLQFCKENSL 23 (512)
Q Consensus 8 ~e~~~li~q~L~e~G~ 23 (512)
-|++.++.+.|+..|+
T Consensus 163 aEvi~l~~~~l~~lgl 178 (456)
T 3lc0_A 163 VELVCAACWAMRSLGL 178 (456)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 4899999999999997
No 430
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=24.39 E-value=45 Score=22.05 Aligned_cols=17 Identities=0% Similarity=0.280 Sum_probs=13.9
Q ss_pred cchhhHHHHHHHHHHhc
Q 010362 5 IEARDVIKIVLQFCKEN 21 (512)
Q Consensus 5 ~~~~e~~~li~q~L~e~ 21 (512)
.++.++...|+|||+..
T Consensus 5 ~~~K~la~sIi~FL~~~ 21 (74)
T 2lxb_A 5 ASKEEIAALIVNYFSSI 21 (74)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHh
Confidence 35778999999999864
No 431
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=23.89 E-value=1.2e+02 Score=21.58 Aligned_cols=93 Identities=8% Similarity=0.028 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhcChHHHHHHHHhhcCccccccccHHH-HHhhhccCCchhhhhhhccc-cCChhHHHHHHHHHHHHHHHc
Q 010362 10 VIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIET-FVADINSGRWDAILPQVAQL-KLPRNKLEDLYEQIVLEMIEL 87 (512)
Q Consensus 10 ~~~li~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~-~~~~i~~g~w~~~~~~l~~~-~~~~~~~~~l~~~~~~e~l~~ 87 (512)
...+=..+++..-|.++...+++=-.+.-+....... =.-....|+|++++..+... .+.++. ...+-..-.-+...
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~~ 85 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF-VRAYIRKATAQIAV 85 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHH
Confidence 3444456677778888888887654432221110100 11123568998888865543 222221 12222333345667
Q ss_pred CChHHHHHHHHhcchh
Q 010362 88 RELDTARAILRQTQAM 103 (512)
Q Consensus 88 ~~~~~a~~~lr~~~~~ 103 (512)
++..+|+..+++.+..
T Consensus 86 ~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 86 KEYASALETLDAARTK 101 (126)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHh
Confidence 8889998888876554
No 432
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.80 E-value=57 Score=20.03 Aligned_cols=22 Identities=5% Similarity=-0.047 Sum_probs=17.5
Q ss_pred cchhhHHHHHHHHHHhcChHHH
Q 010362 5 IEARDVIKIVLQFCKENSLQQT 26 (512)
Q Consensus 5 ~~~~e~~~li~q~L~e~G~~~t 26 (512)
+..+|...-.++-|.|+||.+.
T Consensus 3 ~~~ee~~a~~L~~L~eMGF~D~ 24 (54)
T 2cp8_A 3 SGSSGQTAALMAHLFEMGFCDR 24 (54)
T ss_dssp CSSCTTHHHHHHHHHHHTCCCH
T ss_pred CCHHHhhHHHHHHHHHcCCCcH
Confidence 5667888888999999999543
No 433
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=23.78 E-value=4.1e+02 Score=24.10 Aligned_cols=81 Identities=12% Similarity=0.147 Sum_probs=53.7
Q ss_pred cCCCCEEEEEe-CCC--cEEEEeCCCCceeeecCCCCCCCCCCceeE-EEEEcCCCCCeEEEEcCCCcEEEEecCCeEEE
Q 010362 357 TNDGSRVVTAS-SDC--TVKVWDLKSTDCLQTFKPPPPLRGGDASVN-SVHLFPKNPDHIVVCNKTSSIYIMTLQGQVVK 432 (512)
Q Consensus 357 ~~~~~~l~~~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~ 432 (512)
+++..+|+--. ... .|.++|+.+++....+.........-+.+. ++.+...+ .+++++.....|.++|..|..+.
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~D-sI~i~~~~~~~i~l~n~~G~~~~ 114 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQ-YILVAQNNISRLSSINSQGEIIR 114 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTT-SEEEEEGGGTEEEEECTTCCEEE
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCC-EEEEEeCCcceEEEECCCceEEE
Confidence 33334444333 356 899999999999888776654333333453 44444433 77777778889999999998888
Q ss_pred EeeCCc
Q 010362 433 SFSSGK 438 (512)
Q Consensus 433 ~~~~~~ 438 (512)
.+....
T Consensus 115 k~~~~~ 120 (369)
T 3s9j_A 115 NYNFQT 120 (369)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 765544
No 434
>3csq_A Morphogenesis protein 1; hydrolase, infection, late protein; 1.80A {Bacteriophage phi-29}
Probab=23.75 E-value=45 Score=30.02 Aligned_cols=30 Identities=13% Similarity=0.265 Sum_probs=24.6
Q ss_pred hhHHHHHHHHHHhcChHHHHHH-----HHhhcCcc
Q 010362 8 RDVIKIVLQFCKENSLQQTFQT-----LQNECQVS 37 (512)
Q Consensus 8 ~e~~~li~q~L~e~G~~~t~~~-----l~~Es~~~ 37 (512)
++-.+-|++||+..||+..+.+ ++.|||+.
T Consensus 15 ~~~a~~i~~~l~~~G~s~~~aAgilGN~~~ESg~n 49 (334)
T 3csq_A 15 KVNAQYILNYLSSNGWTKQAICGMLGNMQSESTIN 49 (334)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 4556789999999999887554 89999964
No 435
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=23.74 E-value=1.9e+02 Score=27.57 Aligned_cols=55 Identities=9% Similarity=0.014 Sum_probs=37.4
Q ss_pred EEEEEeCCCeEEEEEcC-CC-------eeEEeccc--cCCCeEEEEEcCCCCeEEEEECCCeEEE
Q 010362 455 WIYCVGEDRNLYCFSHQ-SG-------KLEHLMKV--HEKDVIGVTHHPHRNLLATYGEDCTMKL 509 (512)
Q Consensus 455 ~l~~g~~dg~i~iwd~~-~~-------~~~~~~~~--h~~~v~~v~~~p~~~~l~s~~~dg~i~i 509 (512)
.++.|+.+|.|.-.-.. .+ ..+..+.. ...+|..+.+++++..|..++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46788899986544432 21 12223332 3578999999999999999999887765
No 436
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=23.33 E-value=3.4e+02 Score=23.00 Aligned_cols=189 Identities=9% Similarity=0.013 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCCeEEEEEccCCeeeEEeccccccCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceeEEeeCC------
Q 010362 274 DSEMLASGSQDGKIKVWRIRSGQCLRRLERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGH------ 347 (512)
Q Consensus 274 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~------ 347 (512)
+...+++.+.+|.|+--....-. ...+.......+..+........++..+..|.++-+....-... .-.+-
T Consensus 1 ~E~v~v~lT~~G~iKr~~~~~~~-~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~-r~~G~~i~~~i 78 (256)
T 1zvt_A 1 SEPVTIVLSQMGWVRSAKGHDID-APGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSA-RGQGEPLTGKL 78 (256)
T ss_dssp CCEEEEEEETTSEEEEEESSCCC-STTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCS-SSCCEEGGGTC
T ss_pred CCCEEEEEeCCCEEEEeeCCcCC-ceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCc-CCCCeEeeeee
Q ss_pred ----ccceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecCCCCCCCCCCceeEEEEEcCCCCCeEEEEcCCCcEEE
Q 010362 348 ----SSYVNDAIFTNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSSIYI 423 (512)
Q Consensus 348 ----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~~ 423 (512)
...|.++....++.+++.++..|.++...+........-............+..+...+++.+.++..+.+|.+..
T Consensus 79 ~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 79 TLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp CCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred cCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEE
Q ss_pred EecC-----CeEEEEeeCCcc------cCCcEEEEEECCCCCEEEEEeCCCe
Q 010362 424 MTLQ-----GQVVKSFSSGKR------EGGDFVAACVSPKGEWIYCVGEDRN 464 (512)
Q Consensus 424 ~~~~-----~~~~~~~~~~~~------~~~~~~~~~~s~~g~~l~~g~~dg~ 464 (512)
+... ++..-....... .+..+..+..-+++..++.+...+.
T Consensus 159 f~~~ei~~~gRa~GV~~i~L~~~~~k~~~d~Vv~~~~~~~~~~l~~~~g~~k 210 (256)
T 1zvt_A 159 FPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRK 210 (256)
T ss_dssp EEGGGSCBCSSBSCEESSCCCHHHHHTTSSCEEEEEEEC-CCEEEEEETTEE
T ss_pred EEHHHCCCcCccCCeEEEEcccccCCCCCCEEEEEEEECCCCEEEEEeCcce
No 437
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=23.08 E-value=36 Score=22.94 Aligned_cols=33 Identities=6% Similarity=0.148 Sum_probs=27.3
Q ss_pred cchhhHHHHHHHHHHhcChHHHHHHHHhhcCccc
Q 010362 5 IEARDVIKIVLQFCKENSLQQTFQTLQNECQVSL 38 (512)
Q Consensus 5 ~~~~e~~~li~q~L~e~G~~~t~~~l~~Es~~~~ 38 (512)
+|-.+.-.-|++||+..| ..||..|.++-|++-
T Consensus 7 ~~~~~~~~~IL~~Lk~~g-~~ta~eiA~~Lgit~ 39 (79)
T 1xmk_A 7 LDMAEIKEKICDYLFNVS-DSSALNLAKNIGLTK 39 (79)
T ss_dssp HHHHHHHHHHHHHHHHTC-CEEHHHHHHHHCGGG
T ss_pred ccchhHHHHHHHHHHHcC-CcCHHHHHHHcCCCc
Confidence 344677888999999999 678999999999853
No 438
>3aqt_A Bacterial regulatory proteins, TETR family; helix-turn-helix, all alpha, transcription, transcription RE transcription regulator; 2.50A {Corynebacterium glutamicum} PDB: 3aqs_A
Probab=22.88 E-value=1.1e+02 Score=25.48 Aligned_cols=58 Identities=5% Similarity=0.126 Sum_probs=41.9
Q ss_pred cchhhHHHHHHHHHHhcChHH-HHHHHHhhcCcccc----ccccHHHHHhhhccCCchhhhhh
Q 010362 5 IEARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSLN----TVDSIETFVADINSGRWDAILPQ 62 (512)
Q Consensus 5 ~~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~~----~~~~~~~~~~~i~~g~w~~~~~~ 62 (512)
-.|++|+....+-+.+.||.. |...+-+++|++-. ...+.+.+..++++.-.+.....
T Consensus 46 ~~r~~Il~aA~~lf~~~G~~~~t~~~IA~~aGvs~~t~Y~~F~sKe~Ll~~v~~~~~~~~~~~ 108 (245)
T 3aqt_A 46 QTRARLITSARTLMAERGVDNVGIAEITEGANIGTGTFYNYFPDREQLLQAVAEDAFESVGIA 108 (245)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCCHHHHHHHTTSCGGGGGGTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcccCcHHHHHHHhCCChHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 357889999999999999965 88999999999632 34456666666665555444443
No 439
>3c2b_A Transcriptional regulator, TETR family; structural genomics, APC5923, PSI-2, PR structure initiative; 2.10A {Agrobacterium tumefaciens str}
Probab=22.85 E-value=1.4e+02 Score=24.12 Aligned_cols=56 Identities=13% Similarity=0.099 Sum_probs=40.8
Q ss_pred chhhHHHHHHHHHHhcChHH-HHHHHHhhcCcccc----ccccHHHHHhhhccCCchhhhh
Q 010362 6 EARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSLN----TVDSIETFVADINSGRWDAILP 61 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~~----~~~~~~~~~~~i~~g~w~~~~~ 61 (512)
.|++|+..-.+-+.+.||.. |...+-+++|++-- ...+.+.+..++..-..+....
T Consensus 16 ~r~~Il~aA~~lf~~~G~~~~s~~~IA~~agvs~~t~Y~~F~sKe~L~~~~~~~~~~~~~~ 76 (221)
T 3c2b_A 16 RQNAVLDQALRLLVEGGEKALTTSGLARAANCSKESLYKWFGDRDGLLAAMITFQQSKVRT 76 (221)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHHSSHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHHHHhCCcccCCHHHHHHHhCCCHHHHHHhCCCHHHHHHHHHHHHHHHHHh
Confidence 46788899999999999985 89999999999632 3445666666666544444333
No 440
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=22.65 E-value=1.4e+02 Score=22.65 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHHcCChHHHHHHHHhcchh
Q 010362 71 NKLEDLYEQIVLEMIELRELDTARAILRQTQAM 103 (512)
Q Consensus 71 ~~~~~l~~~~~~e~l~~~~~~~a~~~lr~~~~~ 103 (512)
.++|=++-+.|+||+..+..++|..++.+-...
T Consensus 32 ~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~ 64 (138)
T 2j4b_A 32 PLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGD 64 (138)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHCCChHHHHHHHHHHhHH
Confidence 467889999999999999999999999875543
No 441
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=21.80 E-value=3.4e+02 Score=23.12 Aligned_cols=86 Identities=13% Similarity=0.051 Sum_probs=38.2
Q ss_pred HHHHHhcChHHHHHHHHhhcCccccccccHHH-HHhhhccCCchhhhhhhccccC-ChhHHHHHHHHHHHHHHHcCChHH
Q 010362 15 LQFCKENSLQQTFQTLQNECQVSLNTVDSIET-FVADINSGRWDAILPQVAQLKL-PRNKLEDLYEQIVLEMIELRELDT 92 (512)
Q Consensus 15 ~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~-~~~~i~~g~w~~~~~~l~~~~~-~~~~~~~l~~~~~~e~l~~~~~~~ 92 (512)
..++...-|.++...|++=-...-+.....-. -+-.+..|++++++..+....- .++. ....-..-+++.+.+....
T Consensus 125 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~-~~~~~~~~~~l~~~~~~~~ 203 (287)
T 3qou_A 125 MQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDT-RYQGLVAQIELLXQAADTP 203 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSH-HHHHHHHHHHHHHHHTSCH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcch-HHHHHHHHHHHHhhcccCc
Confidence 33444455666665555533332221111100 1122446788887777766522 1111 1112222334555555555
Q ss_pred HHHHHHhcc
Q 010362 93 ARAILRQTQ 101 (512)
Q Consensus 93 a~~~lr~~~ 101 (512)
|...+++.+
T Consensus 204 a~~~l~~al 212 (287)
T 3qou_A 204 EIQQLQQQV 212 (287)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 666665543
No 442
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.61 E-value=2.3e+02 Score=20.39 Aligned_cols=93 Identities=9% Similarity=0.024 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcChHHHHHHHHhhcCccccc---cccHH-HHHhhhccCCchhhhhhhccc-cCChhHHHHHHHHHHHHH
Q 010362 10 VIKIVLQFCKENSLQQTFQTLQNECQVSLNT---VDSIE-TFVADINSGRWDAILPQVAQL-KLPRNKLEDLYEQIVLEM 84 (512)
Q Consensus 10 ~~~li~q~L~e~G~~~t~~~l~~Es~~~~~~---~~~~~-~~~~~i~~g~w~~~~~~l~~~-~~~~~~~~~l~~~~~~e~ 84 (512)
...+-..++...-|.++...+++=-...-+. ..... .=......|+|++++..+... .+.++. ...+-..-.-+
T Consensus 31 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~ 109 (148)
T 2dba_A 31 LRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD-VKALYRRSQAL 109 (148)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC-HHHHHHHHHHH
Confidence 3444556666677888888887654443221 01000 011224568888888765542 221111 11222222234
Q ss_pred HHcCChHHHHHHHHhcchh
Q 010362 85 IELRELDTARAILRQTQAM 103 (512)
Q Consensus 85 l~~~~~~~a~~~lr~~~~~ 103 (512)
...++.+.|...+++.+..
T Consensus 110 ~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 110 EKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHc
Confidence 5568888888888765543
No 443
>3bjb_A Probable transcriptional regulator, TETR family P; APC7331, rhodococcus SP. RHA1, structural genomics, PS protein structure initiative; 2.50A {Rhodococcus SP}
Probab=21.43 E-value=94 Score=25.12 Aligned_cols=53 Identities=9% Similarity=0.220 Sum_probs=39.6
Q ss_pred chhhHHHHHHHHHHhcChHH-HHHHHHhhcCccc----cccccHHHHHhhhccCCchh
Q 010362 6 EARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSL----NTVDSIETFVADINSGRWDA 58 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~----~~~~~~~~~~~~i~~g~w~~ 58 (512)
.|+.|+..-.+-+.+.||.. |...+-+++|++- ...++.+.+..++.+..++.
T Consensus 23 ~r~~Il~AA~~lf~e~G~~~~s~~~IA~~AGVsk~tlY~~F~sKe~L~~a~~~~~~~~ 80 (207)
T 3bjb_A 23 RHVRMLEAAIELATEKELARVQMHEVAKRAGVAIGTLYRYFPSKTHLFVAVMVDQIDR 80 (207)
T ss_dssp HHHHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCcccCCHHHHHHHhCCCHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 46778888899999999997 8999999999953 33455666666665544433
No 444
>3eup_A Transcriptional regulator, TETR family; structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 1.99A {Cytophaga hutchinsonii}
Probab=21.39 E-value=46 Score=26.70 Aligned_cols=52 Identities=10% Similarity=0.155 Sum_probs=37.4
Q ss_pred cchhhHHHHHHHHHHhcChHH-HHHHHHhhcCcccc----ccccHHHHHhhhccCCc
Q 010362 5 IEARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSLN----TVDSIETFVADINSGRW 56 (512)
Q Consensus 5 ~~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~~----~~~~~~~~~~~i~~g~w 56 (512)
-.|+.|+..-.+-+.+.||.. |...+-+++|++-- ..++.+.+..++..--+
T Consensus 11 ~~r~~Il~aA~~lf~~~G~~~~ti~~IA~~agvs~~t~Y~~F~sK~~L~~~~~~~~~ 67 (204)
T 3eup_A 11 RTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNW 67 (204)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHTCCHHHHTTTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcccCCHHHHHHHhCCCcHHHHHhCCCHHHHHHHHHHHHH
Confidence 357888889999999999998 89999999999532 23344444444444333
No 445
>1vi0_A Transcriptional regulator; structural genomics; HET: MSE DCC; 1.65A {Bacillus subtilis} SCOP: a.4.1.9 a.121.1.1
Probab=21.39 E-value=71 Score=25.82 Aligned_cols=54 Identities=11% Similarity=0.148 Sum_probs=38.1
Q ss_pred ccchhhHHHHHHHHHHhcChHH-HHHHHHhhcCccc----cccccHHHHHhhhccCCch
Q 010362 4 EIEARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSL----NTVDSIETFVADINSGRWD 57 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~----~~~~~~~~~~~~i~~g~w~ 57 (512)
+-.|++|+..-.+-+.+.||.. |..-+-+++|++- ....+.+.+..++.+...+
T Consensus 7 ~~~r~~Il~aA~~lf~~~Gy~~~s~~~IA~~AGvs~gt~Y~yF~sKe~L~~~v~~~~~~ 65 (206)
T 1vi0_A 7 RPKYMQIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFKNKEDILISLFKEKMG 65 (206)
T ss_dssp -CHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCcccCCHHHHHHHhCCChhHHHHHcCCHHHHHHHHHHHHHH
Confidence 4467888999999999999986 8999999999953 2234455555555544333
No 446
>1z0x_A Transcriptional regulator, TETR family; structural genomics, PSI, P structure initiative; 2.40A {Enterococcus faecalis} SCOP: a.4.1.9 a.121.1.1
Probab=21.07 E-value=2.2e+02 Score=23.26 Aligned_cols=54 Identities=9% Similarity=0.244 Sum_probs=40.5
Q ss_pred CccccchhhHHHHHHHHHHhc-ChHH-HHHHHHhhcCccc----cccccHHHHHhhhccC
Q 010362 1 MTLEIEARDVIKIVLQFCKEN-SLQQ-TFQTLQNECQVSL----NTVDSIETFVADINSG 54 (512)
Q Consensus 1 ~~~~~~~~e~~~li~q~L~e~-G~~~-t~~~l~~Es~~~~----~~~~~~~~~~~~i~~g 54 (512)
|.-+..|++|+..-.+-+.+. ||.. |...+-+++|++- ....+.+.+..++.+-
T Consensus 1 m~~~~tr~~Il~aA~~l~~~~~G~~~~s~~~IA~~aGvs~~tlY~~F~sK~~Ll~av~~~ 60 (220)
T 1z0x_A 1 MEPKLSKDTIIAAAFSLLEKSPTLEQLSMRKVAKQLGVQAPAIYWYFKNKQALLQSMAEA 60 (220)
T ss_dssp ---CCSHHHHHHHHHHHHHHSCCGGGCCHHHHHHHHTSCHHHHHTTCSSHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHhcCCcccCCHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHHH
Confidence 566788999999999999999 9975 8999999999953 3345566666655543
No 447
>1pb6_A Hypothetical transcriptional regulator YCDC; helix-loop-helix, dimer, structural genomics, PSI, protein structure initiative; 2.50A {Escherichia coli} PDB: 3loc_A*
Probab=20.73 E-value=1.1e+02 Score=24.61 Aligned_cols=59 Identities=12% Similarity=0.129 Sum_probs=42.9
Q ss_pred chhhHHHHHHHHHHhcChHH-HHHHHHhhcCccc----cccccHHHHHhhhccCCchhhhhhhc
Q 010362 6 EARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSL----NTVDSIETFVADINSGRWDAILPQVA 64 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~----~~~~~~~~~~~~i~~g~w~~~~~~l~ 64 (512)
.|+.|+..-.+-+.+.||.. |...+-+++|++- ....+.+.+..++..--++.....+.
T Consensus 19 ~r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~t~Y~~F~sK~~L~~~~~~~~~~~~~~~~~ 82 (212)
T 1pb6_A 19 KKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLK 82 (212)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCCHHHHHHHTTSCHHHHHHHSSSHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHcCcchhhHHHHHHHHCCChhHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56788888999999999987 4999999999963 23445666666666655555544443
No 448
>3qbm_A TETR transcriptional regulator; DNA/RNA-binding three-helical bundle, structural genomics, J center for structural genomics, JCSG; HET: MSE PGE; 1.80A {Chloroflexus aurantiacus}
Probab=20.67 E-value=72 Score=25.29 Aligned_cols=34 Identities=3% Similarity=0.017 Sum_probs=29.7
Q ss_pred cchhhHHHHHHHHHHhcChHH-HHHHHHhhcCccc
Q 010362 5 IEARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSL 38 (512)
Q Consensus 5 ~~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~ 38 (512)
-.|+.|+..-.+-+.+.||.. |...+-+++|++-
T Consensus 7 ~~r~~Il~aa~~l~~~~G~~~~t~~~IA~~agvs~ 41 (199)
T 3qbm_A 7 ETRERVVAQAAALFNVSGYAGTAISDIMAATGLEK 41 (199)
T ss_dssp HHHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTCCH
T ss_pred hHHHHHHHHHHHHHHHhCcCcCCHHHHHHHhCCCc
Confidence 357888999999999999997 7999999999953
No 449
>3on2_A Probable transcriptional regulator; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; HET: MSE PG6; 1.96A {Rhodococcus jostii}
Probab=20.65 E-value=1.8e+02 Score=22.78 Aligned_cols=51 Identities=10% Similarity=0.166 Sum_probs=36.0
Q ss_pred chhhHHHHHHHHHHhcChHH-HHHHHHhhcCcccc----ccccHHHHHhhhccCCc
Q 010362 6 EARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSLN----TVDSIETFVADINSGRW 56 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~~----~~~~~~~~~~~i~~g~w 56 (512)
.|++|+..-.+-+.+.||.. |...+-+++|++-- ..++.+.+..++...-.
T Consensus 13 ~r~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~t~Y~~F~sK~~L~~~~~~~~~ 68 (199)
T 3on2_A 13 LRRVLLARAESTLEKDGVDGLSLRQLAREAGVSHAAPSKHFRDRQALLDALAESGF 68 (199)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCCHHHHHHHTC-----CCCSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHHHhCCChHHHHHHhCCHHHHHHHHHHHHH
Confidence 57789999999999999997 99999999999642 34455555555554333
No 450
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=20.56 E-value=75 Score=25.63 Aligned_cols=84 Identities=15% Similarity=0.238 Sum_probs=45.8
Q ss_pred ccchhhHHHHHHHHHHhcChHHHHHHHHhhcCccccc-cc--------cHHHHHhhhccCCchhhhhhhcccc------C
Q 010362 4 EIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNT-VD--------SIETFVADINSGRWDAILPQVAQLK------L 68 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~t~~~l~~Es~~~~~~-~~--------~~~~~~~~i~~g~w~~~~~~l~~~~------~ 68 (512)
.+++..=+-.-+.||..++=.=....|++|+|+-..- .+ -++..+..|++.+|..+=.++..++ -
T Consensus 81 klkt~~Qv~AAl~yl~~~~~~id~~~Fe~~cGVGV~VT~EqI~~~V~~~i~~~k~~i~~~RY~~~g~ll~~vr~~p~LkW 160 (187)
T 3tl4_X 81 DLKTSLQVDAAFKYVKANGEASTKMGMNENSGVGIEITEDQVRNYVMQYIQENKERILTERYKLVPGIFADVKNLKELKW 160 (187)
T ss_dssp SCCSHHHHHHHHHHHHHHGGGCCHHHHHHTTTTTCCCCHHHHHHHHHHHHHHTHHHHHHHGGGGHHHHHHHHHTCGGGTT
T ss_pred cCCcHHHHHHHHHHHHhCCCCCCHHHHHHHCCCCeEeCHHHHHHHHHHHHHHhHHHHHHhccccHHHHHHHHhcccCCCC
Confidence 3444444556678888764334567899999986542 11 1223344466777764433333332 1
Q ss_pred -ChhHHHHHHHHHHHHHHHc
Q 010362 69 -PRNKLEDLYEQIVLEMIEL 87 (512)
Q Consensus 69 -~~~~~~~l~~~~~~e~l~~ 87 (512)
.++.+-.....+++++|-.
T Consensus 161 Ad~~~vK~~vD~~~l~lLGP 180 (187)
T 3tl4_X 161 ADPRSFKPIIDQEVLKLLGP 180 (187)
T ss_dssp SCTTSHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHHHcCC
Confidence 1233445666666666543
No 451
>3jsj_A Putative TETR-family transcriptional regulator; DNA-binding, transcription regulation; 2.10A {Streptomyces avermitilis ma-4680}
Probab=20.51 E-value=1e+02 Score=24.20 Aligned_cols=59 Identities=12% Similarity=0.126 Sum_probs=42.9
Q ss_pred cchhhHHHHHHHHHHhcChHHHHHHHHhhcCcccc----ccccHHHHHhhhccCCchhhhhhh
Q 010362 5 IEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLN----TVDSIETFVADINSGRWDAILPQV 63 (512)
Q Consensus 5 ~~~~e~~~li~q~L~e~G~~~t~~~l~~Es~~~~~----~~~~~~~~~~~i~~g~w~~~~~~l 63 (512)
-.|++|+..-.+-+.+.||.-|...+-+++|++-- ..++.+.+..++...-++.....+
T Consensus 9 ~~r~~Il~aA~~lf~~~G~~~t~~~IA~~aGvs~~tly~~F~sK~~L~~~~~~~~~~~~~~~~ 71 (190)
T 3jsj_A 9 SPRERLLEAAAALTYRDGVGIGVEALCKAAGVSKRSMYQLFESKDELLAASLKERSAAFVAKA 71 (190)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCHHHHHHHHTCCHHHHHHHCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCccccHHHHHHHhCCCHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999779999999999632 334555666655555554444444
No 452
>3ljl_A Transcriptional regulator LUXT; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 3.20A {Vibrio parahaemolyticus}
Probab=20.50 E-value=97 Score=23.59 Aligned_cols=53 Identities=13% Similarity=0.229 Sum_probs=38.7
Q ss_pred chhhHHHHHHHHHHhcChHH-HHHHHHhhcCcccc----ccccHHHHHhhhccCCchh
Q 010362 6 EARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSLN----TVDSIETFVADINSGRWDA 58 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~~----~~~~~~~~~~~i~~g~w~~ 58 (512)
.|+.|+..-.+-+.+.||.. |...+-+++|++-. ...+.+.+..+++..-++.
T Consensus 15 ~r~~Il~aa~~lf~~~G~~~~ti~~Ia~~agvs~~t~Y~~F~sK~~L~~a~~~~~~~~ 72 (156)
T 3ljl_A 15 TIQKIMDAVVDQLLRLGYDKMSYTTLSQQTGVSRTGISHHFPKKTDFTAALDGRIFKM 72 (156)
T ss_dssp HHHHHHHHHHHHHHHTHHHHCCHHHHHHHHTCCHHHHHHHCSSTHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHhChhhcCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 37789999999999999997 89999999999632 2334555555555544443
No 453
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.31 E-value=2.8e+02 Score=26.47 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=41.3
Q ss_pred ceEEEEECC----CC--CEEEEEeCCCeEEEEEcCCCeee---ccccccccceeeccCcceeEEEEcCCCCeEEEEeCCC
Q 010362 215 HAECARFSP----DG--QFLVSCSFDGFIEVWDYLSGKLK---KDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDG 285 (512)
Q Consensus 215 ~v~~~~~s~----~~--~~l~sg~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg 285 (512)
..++|+... ++ ..+..|+.+|.|.=.-+...... ..........+ ....+|..|.++++..+|..++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~-~~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF-REPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCS-SSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeec-CCCCccceEEEcCCCCEEEEEECCe
Confidence 456665542 24 35778999997754333221100 00101111111 1357899999999999999998877
Q ss_pred eEEE
Q 010362 286 KIKV 289 (512)
Q Consensus 286 ~i~v 289 (512)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 454
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=20.26 E-value=51 Score=25.33 Aligned_cols=88 Identities=11% Similarity=0.084 Sum_probs=48.2
Q ss_pred chhhHHHHHHHHHHhcChHHHHHHHHhhcCccccccccHHHH----HhhhccCCchhhhhhhccc-cCChhHHHHHHHHH
Q 010362 6 EARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETF----VADINSGRWDAILPQVAQL-KLPRNKLEDLYEQI 80 (512)
Q Consensus 6 ~~~e~~~li~q~L~e~G~~~t~~~l~~Es~~~~~~~~~~~~~----~~~i~~g~w~~~~~~l~~~-~~~~~~~~~l~~~~ 80 (512)
+-++|-..|.++|.+.+.-+-+- .+. + +..+.+ ......|++++++..+... .+.++. ...+-..
T Consensus 7 ~~~~~~~~l~~~~~~~~~l~~al------~l~--p-~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~-~~~~~~l 76 (151)
T 3gyz_A 7 ENESISTAVIDAINSGATLKDIN------AIP--D-DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN-VDYIMGL 76 (151)
T ss_dssp --CHHHHHHHHHHHTSCCTGGGC------CSC--H-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHh------CCC--H-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHH
Confidence 34677788888888776432221 221 1 111111 1224569999988876654 222211 1223333
Q ss_pred HHHHHHcCChHHHHHHHHhcchh
Q 010362 81 VLEMIELRELDTARAILRQTQAM 103 (512)
Q Consensus 81 ~~e~l~~~~~~~a~~~lr~~~~~ 103 (512)
-.-+...+++++|+..+++.+..
T Consensus 77 g~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 77 AAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccHHHHHHHHHHHHhh
Confidence 34456778899999888876654
No 455
>3ppb_A Putative TETR family transcription regulator; DNA-binding, helix-turn-helix motif, HTH motif, DNA/RNA-BIND helical bundle fold; HET: MSE PG4; 2.10A {Shewanella loihica}
Probab=20.23 E-value=97 Score=24.34 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=41.7
Q ss_pred ccchhhHHHHHHHHHHhcChHH-HHHHHHhhcCcccc----ccccHHHHHhhhccCCchhhhhh
Q 010362 4 EIEARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSLN----TVDSIETFVADINSGRWDAILPQ 62 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~~----~~~~~~~~~~~i~~g~w~~~~~~ 62 (512)
+-.+++|+....+-+.+.||.. |...+-+++|++-. ...+.+.+..++.+--++.....
T Consensus 8 ~~~r~~Il~aa~~l~~~~G~~~~tv~~Ia~~agvs~~t~Y~~F~sK~~L~~~~~~~~~~~~~~~ 71 (195)
T 3ppb_A 8 RTKKQAILETALQLFVSQGFHGTSTATIAREAGVATGTLFHHFPSKEQLLEQLFLGVKQEFADA 71 (195)
T ss_dssp CCHHHHHHHHHHHHHHHTCSTTSCHHHHHHHHTCCHHHHHHHCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcCcccCCHHHHHHHhCCChhHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 4467889999999999999987 59999999999632 23445556555555444444433
No 456
>3frq_A Repressor protein MPHR(A); macrolide antibiotic. repressor, biosensor, erythromycin, STRPTOMYCES, natural products, biosynthesis, DNA-binding; HET: ERY; 1.76A {Escherichia coli} PDB: 3g56_A
Probab=20.09 E-value=78 Score=25.15 Aligned_cols=58 Identities=10% Similarity=0.089 Sum_probs=41.0
Q ss_pred ccchhhHHHHHHHHHHhcChHH-HHHHHHhhcCcccc----ccccHHHHHhhhccCCchhhhh
Q 010362 4 EIEARDVIKIVLQFCKENSLQQ-TFQTLQNECQVSLN----TVDSIETFVADINSGRWDAILP 61 (512)
Q Consensus 4 ~~~~~e~~~li~q~L~e~G~~~-t~~~l~~Es~~~~~----~~~~~~~~~~~i~~g~w~~~~~ 61 (512)
+-+|++|+..-.+-+.+.||.. |...+-+++|++-- ..++.+.+..++..--++....
T Consensus 7 ~~tr~~Il~AA~~l~~~~G~~~~t~~~IA~~agvs~~t~Y~~F~sK~~L~~a~~~~~~~~~~~ 69 (195)
T 3frq_A 7 LKSDDEVLEAATVVLKRCGPIEFTLSGVAKEVGLSRAALIQRFTNRDTLLVRMMERGVEQVRH 69 (195)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHTCCHHHHHHHHCSHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhhCcccCCHHHHHHHhCCCHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999965 79999999999532 2334555555555444444333
Done!