Your job contains 1 sequence.
>010366
MHKQNRRWLVMRTNWQGRGCRHVAFMLWGSLSNFCFRHVYKFDWHLLQAENEYHRARNQE
LVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKLA
EDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKLVVAVGGATALAAGIYT
TREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGGDKELASKNGNGFGD
VILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMT
GGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL
FRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAG
SRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENC
VLDPSLFREVVDYKVAEHQQRRKLAAAGGGSN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010366
(512 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097690 - symbol:AT3G03060 species:3702 "Arabi... 1973 6.2e-204 1
TAIR|locus:2148206 - symbol:AT5G16930 species:3702 "Arabi... 1953 8.2e-202 1
TAIR|locus:2062170 - symbol:AT2G18330 species:3702 "Arabi... 1623 7.6e-167 1
ZFIN|ZDB-GENE-040426-1826 - symbol:atad3b "ATPase family,... 753 1.2e-74 1
WB|WBGene00010015 - symbol:atad-3 species:6239 "Caenorhab... 751 1.9e-74 1
UNIPROTKB|H0Y2W2 - symbol:ATAD3A "ATPase family AAA domai... 746 6.5e-74 1
UNIPROTKB|Q9NVI7 - symbol:ATAD3A "ATPase family AAA domai... 746 6.5e-74 1
MGI|MGI:1919214 - symbol:Atad3a "ATPase family, AAA domai... 730 3.2e-72 1
UNIPROTKB|A7YWC4 - symbol:ATAD3 "ATPase family AAA domain... 728 5.3e-72 1
FB|FBgn0040237 - symbol:bor "belphegor" species:7227 "Dro... 727 6.7e-72 1
UNIPROTKB|F1RJE4 - symbol:LOC100525876 "Uncharacterized p... 727 6.7e-72 1
UNIPROTKB|E1BRY8 - symbol:ATAD3A "Uncharacterized protein... 725 1.1e-71 1
UNIPROTKB|E2QZ61 - symbol:ATAD3A "Uncharacterized protein... 723 1.8e-71 1
RGD|1305964 - symbol:Atad3a "ATPase family, AAA domain co... 723 1.8e-71 1
UNIPROTKB|Q3KRE0 - symbol:Atad3 "ATPase family AAA domain... 723 1.8e-71 1
UNIPROTKB|Q5T9A4 - symbol:ATAD3B "ATPase family AAA domai... 685 1.9e-67 1
UNIPROTKB|Q5T2N8 - symbol:ATAD3C "ATPase family AAA domai... 619 1.9e-60 1
UNIPROTKB|Q5SV16 - symbol:ATAD3A "ATPase family AAA domai... 260 2.2e-36 2
POMBASE|SPCC24B10.10c - symbol:yta4 "mitochondrial outer ... 220 1.2e-15 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 206 1.2e-14 2
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 206 1.2e-14 2
ASPGD|ASPL0000002098 - symbol:AN6263 species:162425 "Emer... 223 2.9e-14 3
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 202 3.3e-14 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 202 3.3e-14 2
POMBASE|SPAC2G11.06 - symbol:vps4 "AAA family ATPase Vps4... 194 3.4e-14 3
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 197 4.3e-14 2
GENEDB_PFALCIPARUM|PF13_0063 - symbol:PF13_0063 "26S prot... 209 4.6e-14 1
UNIPROTKB|Q8IEK3 - symbol:PF13_0063 "26S proteasome regul... 209 4.6e-14 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 204 5.3e-14 2
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 212 8.2e-14 1
TAIR|locus:2031005 - symbol:AT1G50140 species:3702 "Arabi... 214 9.6e-14 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 202 1.0e-13 2
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 213 1.4e-13 2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 209 1.8e-13 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 208 2.3e-13 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 188 2.7e-13 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 203 2.7e-13 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 203 2.7e-13 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 202 3.6e-13 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 195 4.9e-13 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 208 6.2e-13 2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 208 6.2e-13 2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 208 6.2e-13 2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 208 6.2e-13 2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 208 6.2e-13 2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 208 6.2e-13 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 208 6.3e-13 2
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 208 6.6e-13 2
TAIR|locus:2137261 - symbol:AT4G04180 species:3702 "Arabi... 204 6.9e-13 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 197 8.1e-13 1
TAIR|locus:2137777 - symbol:AT4G27680 species:3702 "Arabi... 197 8.8e-13 1
CGD|CAL0002261 - symbol:RPT5 species:5476 "Candida albica... 198 9.8e-13 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 209 1.2e-12 2
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 179 1.3e-12 2
UNIPROTKB|Q6AZT2 - symbol:spast "Spastin" species:8355 "X... 201 1.4e-12 2
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 199 1.5e-12 1
UNIPROTKB|Q5ZK92 - symbol:SPAST "Spastin" species:9031 "G... 199 1.6e-12 2
UNIPROTKB|E1C6S3 - symbol:SPAST "Spastin" species:9031 "G... 199 1.8e-12 2
UNIPROTKB|Q05AS3 - symbol:spast "Spastin" species:8364 "X... 201 1.8e-12 2
UNIPROTKB|F1NCJ3 - symbol:SPAST "Spastin" species:9031 "G... 199 1.9e-12 2
ZFIN|ZDB-GENE-040426-2331 - symbol:spast "spastin" specie... 200 3.1e-12 2
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 193 3.1e-12 1
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 193 3.3e-12 1
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 193 3.3e-12 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 185 3.4e-12 2
TAIR|locus:2168646 - symbol:AT5G53540 species:3702 "Arabi... 192 3.4e-12 1
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 197 3.6e-12 1
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 197 3.6e-12 1
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 193 3.8e-12 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 200 3.8e-12 2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 200 3.8e-12 2
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 196 3.8e-12 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 196 3.8e-12 1
POMBASE|SPBC16C6.07c - symbol:rpt1 "19S proteasome regula... 192 4.2e-12 1
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 191 4.3e-12 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 192 4.7e-12 1
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 195 4.9e-12 1
ASPGD|ASPL0000034586 - symbol:AN3061 species:162425 "Emer... 190 5.2e-12 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 190 5.4e-12 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 190 5.5e-12 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 190 5.8e-12 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 190 5.8e-12 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 190 5.8e-12 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 190 5.8e-12 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 190 5.8e-12 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 190 5.8e-12 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 190 6.0e-12 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 190 6.1e-12 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 190 6.1e-12 1
RGD|1308494 - symbol:Spast "spastin" species:10116 "Rattu... 194 6.1e-12 2
UNIPROTKB|F1M9D2 - symbol:Spast "Spastin" species:10116 "... 194 6.1e-12 2
UNIPROTKB|A2VDN5 - symbol:SPAST "Spastin" species:9913 "B... 196 7.1e-12 2
ASPGD|ASPL0000034636 - symbol:AN2917 species:162425 "Emer... 190 7.2e-12 1
UNIPROTKB|D4A0I3 - symbol:Spast "Spastin" species:10116 "... 194 7.4e-12 2
MGI|MGI:1858896 - symbol:Spast "spastin" species:10090 "M... 194 7.4e-12 2
UNIPROTKB|Q9UBP0 - symbol:SPAST "Spastin" species:9606 "H... 194 7.5e-12 2
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 190 7.6e-12 2
UNIPROTKB|F1PR99 - symbol:SPAST "Uncharacterized protein"... 194 7.9e-12 2
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 184 8.0e-12 1
DICTYBASE|DDB_G0284415 - symbol:psmC3 "26S proteasome ATP... 189 8.2e-12 1
WARNING: Descriptions of 518 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2097690 [details] [associations]
symbol:AT3G03060 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005618
"cell wall" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0008270 GO:GO:0009505
GO:GO:0017111 eggNOG:COG1223 InterPro:IPR021911 Pfam:PF12037
OMA:QKMAWLS EMBL:AK226793 IPI:IPI00536262 RefSeq:NP_186956.2
UniGene:At.53165 ProteinModelPortal:Q0WVF7 SMR:Q0WVF7 STRING:Q0WVF7
PaxDb:Q0WVF7 PRIDE:Q0WVF7 EnsemblPlants:AT3G03060.1 GeneID:821146
KEGG:ath:AT3G03060 TAIR:At3g03060 InParanoid:Q0WVF7
PhylomeDB:Q0WVF7 ProtClustDB:CLSN2685560 Genevestigator:Q0WVF7
Uniprot:Q0WVF7
Length = 628
Score = 1973 (699.6 bits), Expect = 6.2e-204, P = 6.2e-204
Identities = 389/459 (84%), Positives = 414/459 (90%)
Query: 47 LQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRA 106
+QAENE+HR RNQELVKMQE+S+IR EQARRATEEQIQAQ+RQTEREKAEIERETIRV+A
Sbjct: 167 MQAENEFHRTRNQELVKMQEDSAIRQEQARRATEEQIQAQRRQTEREKAEIERETIRVKA 226
Query: 107 MAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKXXX 166
+AEAEGRAHEA+LAEDVNRRMLVDRANAEREKW+AAINTTFDHIGGGLRAILTDQNK
Sbjct: 227 IAEAEGRAHEARLAEDVNRRMLVDRANAEREKWVAAINTTFDHIGGGLRAILTDQNKLIV 286
Query: 167 XXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGG 226
IYTTREGAKVIW YVDRILGQPSLIRESSRGKYPWSG SR + +LRG
Sbjct: 287 AVGGVTALAAGIYTTREGAKVIWSYVDRILGQPSLIRESSRGKYPWSGSLSRVMSTLRG- 345
Query: 227 DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAAR 286
KE ASKNG FGDVILHP L KRI L+ +TANTK H APFRN+L +GPPGTGKTMAAR
Sbjct: 346 -KESASKNGKRFGDVILHPPLAKRIEHLATSTANTKLHQAPFRNILLHGPPGTGKTMAAR 404
Query: 287 ELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKT 346
ELARKSGLDYALMTGGDVAPLG QAVTKIH+LFDW KKSKRGLLLFIDEADAFLCERNKT
Sbjct: 405 ELARKSGLDYALMTGGDVAPLGAQAVTKIHELFDWGKKSKRGLLLFIDEADAFLCERNKT 464
Query: 347 YMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFK 406
YMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADR+DEVLEFPLPG+EERFK
Sbjct: 465 YMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRVDEVLEFPLPGEEERFK 524
Query: 407 LLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKL 466
LL LYL+KYIA+AG KPGL RLFK EQQKIEIKG+T+++L EAAAKTEGFSGREIAKL
Sbjct: 525 LLNLYLEKYIAEAGPSKPGLFDRLFKKEQQKIEIKGVTEELLKEAAAKTEGFSGREIAKL 584
Query: 467 MASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLA 505
MASVQAAVYGSE+CVLD LFREVVDYKVAEHQQRRKLA
Sbjct: 585 MASVQAAVYGSEDCVLDSMLFREVVDYKVAEHQQRRKLA 623
>TAIR|locus:2148206 [details] [associations]
symbol:AT5G16930 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 GO:GO:0017111
eggNOG:COG1223 HOGENOM:HOG000231291 InterPro:IPR021911 Pfam:PF12037
OMA:QRYDEQM ProtClustDB:CLSN2685560 EMBL:AY080881 EMBL:AY133778
IPI:IPI00526600 RefSeq:NP_197195.2 UniGene:At.31619
UniGene:At.49031 ProteinModelPortal:Q8RXI0 SMR:Q8RXI0 PaxDb:Q8RXI0
PRIDE:Q8RXI0 EnsemblPlants:AT5G16930.1 GeneID:831556
KEGG:ath:AT5G16930 TAIR:At5g16930 InParanoid:Q8RXI0
PhylomeDB:Q8RXI0 ArrayExpress:Q8RXI0 Genevestigator:Q8RXI0
Uniprot:Q8RXI0
Length = 644
Score = 1953 (692.5 bits), Expect = 8.2e-202, P = 8.2e-202
Identities = 382/465 (82%), Positives = 413/465 (88%)
Query: 47 LQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRA 106
+QAENE R RNQELVKMQEES+IR E ARRATEE+IQAQ+RQTEREKAEIERETIRV+A
Sbjct: 177 MQAENEAQRTRNQELVKMQEESAIRREVARRATEEEIQAQRRQTEREKAEIERETIRVKA 236
Query: 107 MAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKXXX 166
MAEAEGRA E+KL+EDVNRRMLVDRANAEREKW++AINTTFDHIGGGLR ILTDQNK
Sbjct: 237 MAEAEGRARESKLSEDVNRRMLVDRANAEREKWVSAINTTFDHIGGGLRTILTDQNKLIV 296
Query: 167 XXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGG 226
IYTTREGAKVIW YVDRILGQPSLIRESSRGKYPWSG SR L +LRGG
Sbjct: 297 AVGGLTALAAGIYTTREGAKVIWSYVDRILGQPSLIRESSRGKYPWSGSASRVLSTLRGG 356
Query: 227 DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAAR 286
KE SK G GFGDVIL P+L+KRI QL+ ATANTKAH APFRN+LFYGPPGTGKTMAAR
Sbjct: 357 GKESTSKTGKGFGDVILRPALEKRIEQLANATANTKAHQAPFRNILFYGPPGTGKTMAAR 416
Query: 287 ELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKT 346
ELAR+SGLDYALMTGGDVAPLG QAVTKIHQLFDW+KKSKRGLLLFIDEADAFLCERNKT
Sbjct: 417 ELARRSGLDYALMTGGDVAPLGAQAVTKIHQLFDWSKKSKRGLLLFIDEADAFLCERNKT 476
Query: 347 YMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFK 406
YMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE LEFPLPG+EERFK
Sbjct: 477 YMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDETLEFPLPGEEERFK 536
Query: 407 LLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKL 466
LL LYL+KYI++ +KPGL+ LFK EQQ IEIKG+T+D+L EAAAKT+GFSGREIAKL
Sbjct: 537 LLNLYLEKYISKTNLKKPGLLQSLFKKEQQTIEIKGVTEDLLKEAAAKTKGFSGREIAKL 596
Query: 467 MASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGGGS 511
MASVQAAVYGS NC+LD +LFREV+DYKVAEHQQR+KLA G+
Sbjct: 597 MASVQAAVYGSANCLLDANLFREVIDYKVAEHQQRKKLAGTDAGN 641
>TAIR|locus:2062170 [details] [associations]
symbol:AT2G18330 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000741
"karyogamy" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
HSSP:Q01853 GO:GO:0017111 EMBL:AC006439 eggNOG:COG1223
HOGENOM:HOG000231291 OMA:MMDTRVQ InterPro:IPR021911 Pfam:PF12037
ProtClustDB:CLSN2685560 EMBL:AY054494 EMBL:AY093265 IPI:IPI00524126
PIR:A84563 RefSeq:NP_565435.1 UniGene:At.13881
ProteinModelPortal:Q9ZPW5 SMR:Q9ZPW5 STRING:Q9ZPW5 PaxDb:Q9ZPW5
PRIDE:Q9ZPW5 EnsemblPlants:AT2G18330.1 GeneID:816348
KEGG:ath:AT2G18330 TAIR:At2g18330 InParanoid:Q9ZPW5
PhylomeDB:Q9ZPW5 ArrayExpress:Q9ZPW5 Genevestigator:Q9ZPW5
Uniprot:Q9ZPW5
Length = 636
Score = 1623 (576.4 bits), Expect = 7.6e-167, P = 7.6e-167
Identities = 323/472 (68%), Positives = 377/472 (79%)
Query: 47 LQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRA 106
+Q +NE R N ELV MQE SSIR E+AR ATEEQIQAQ+R+TE+E+AE+ERETIRV+A
Sbjct: 163 MQTDNEAQRRHNAELVSMQEASSIRKEKARIATEEQIQAQQRETEKERAELERETIRVKA 222
Query: 107 MAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKXXX 166
MAEAEGRAHEAKL E+ NRRML+D+ N EREKW+AAINTTF HI GG+R +LTD++K
Sbjct: 223 MAEAEGRAHEAKLTEEQNRRMLLDKINGEREKWLAAINTTFSHIEGGVRTLLTDRSKLIM 282
Query: 167 XXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGG 226
+YTTREGA+V WGY++RILGQPSLIRESS G++PW+G S+ L
Sbjct: 283 TVGGVTALAAGVYTTREGARVTWGYINRILGQPSLIRESSMGRFPWAGSVSQFKNKLSTA 342
Query: 227 DKELASKNGNG-FGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAA 285
AS G +VILH SL+ RI +L+ ATANTK+H APFRNM+FYGPPGTGKTM A
Sbjct: 343 AGAAASAEGEKPLENVILHRSLKTRIERLARATANTKSHKAPFRNMMFYGPPGTGKTMVA 402
Query: 286 RELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNK 345
RE+ARKSGLDYA+MTGGDVAPLG QAVTKIH++FDWAKKS +GLLLFIDEADAFLCERN
Sbjct: 403 REIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSNKGLLLFIDEADAFLCERNS 462
Query: 346 TYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERF 405
TYMSEAQRSALNALLFRTGDQS+DIVL LATNRPGDLDSAV DRIDEV+EFPLPG+EERF
Sbjct: 463 TYMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERF 522
Query: 406 KLLKLYLDKYIA---QAGSRKPGLV-HRLFKSEQ-QKIEIKG-LTDDILMEAAAKTEGFS 459
KLLKLYL+KY+ + G + L LFK ++ QKI I+G LTD ++ EAA KTEGFS
Sbjct: 523 KLLKLYLNKYLMGDDKKGEKDSNLKWSNLFKKKKSQKITIEGDLTDQVIKEAAKKTEGFS 582
Query: 460 GREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGGGS 511
GREIAKL+A VQAAVYG ++CVLD LF E+VDYK+ EH QR +LA GG S
Sbjct: 583 GREIAKLVAGVQAAVYGRQDCVLDSQLFEEIVDYKIEEHHQRIRLATEGGQS 634
>ZFIN|ZDB-GENE-040426-1826 [details] [associations]
symbol:atad3b "ATPase family, AAA domain
containing 3B" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 ZFIN:ZDB-GENE-040426-1826 GO:GO:0005524 GO:GO:0017111
HOVERGEN:HBG058506 InterPro:IPR021911 Pfam:PF12037 CTD:83858
EMBL:BC065962 IPI:IPI00505466 RefSeq:NP_991266.1 UniGene:Dr.79319
ProteinModelPortal:Q6NZU8 PRIDE:Q6NZU8 GeneID:403004
KEGG:dre:403004 HOGENOM:HOG000293212 NextBio:20816811 Bgee:Q6NZU8
Uniprot:Q6NZU8
Length = 621
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 178/466 (38%), Positives = 265/466 (56%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRL-----EQARRATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + + +R E+ R EE +Q Q +R T +
Sbjct: 113 LNEETRQHQARAQYQDKLARQRYDDQLRQQTLLNEENLRKQEESVQKQEAMRRATIEHEM 172
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
++ + +R AE++ RA + D+ R + +A R+ + +I T G G R
Sbjct: 173 DLRHKNEMLRVEAESKARARVERENADIIREQIRLKAAEHRQTVLESIRTAGAVFGEGFR 232
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A ++D +K +Y+ R V Y++ LG+PSL+RE+SR + +
Sbjct: 233 AFISDWDKVTATVAGLTLLAAGVYSARNATAVAGRYIEARLGKPSLVRETSR--FTVAEA 290
Query: 216 FSRTLKSLRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYG 275
+K + K L SK + V+L P L++R+R ++ AT NT+ + +RN+L YG
Sbjct: 291 LKHPIKVV----KRLQSKPQDALEGVVLSPPLEERVRDIAIATRNTRQNRGLYRNILMYG 346
Query: 276 PPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDE 335
PPGTGKT+ A++LA SG+DYA+MTGGDVAP+G VT +H++FDWA S+RGLLLF+DE
Sbjct: 347 PPGTGKTLFAKKLAVHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWAATSRRGLLLFVDE 406
Query: 336 ADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLE 395
ADAFL +R+ +SE R+ LNA L+RTG+QS +L LA+N+P D A+ DRIDE++
Sbjct: 407 ADAFLRKRSTEKISEDLRATLNAFLYRTGEQSNKFMLVLASNQPEQFDWAINDRIDEIVN 466
Query: 396 FPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKT 455
F LPG EER +L++LY D+Y+ + + G RL K Q K E A +
Sbjct: 467 FMLPGPEERERLVRLYFDRYVLEPAT---GGRQRL-KLAQFDYGQK------CSEIAKRV 516
Query: 456 EGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQR 501
EG SGREI+KL + QAA Y SE+ VL ++ VD V +H+Q+
Sbjct: 517 EGMSGREISKLGVAWQAAAYSSEDGVLSEAMIDARVDAAVRQHRQK 562
>WB|WBGene00010015 [details] [associations]
symbol:atad-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0035046
"pronuclear migration" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0007005 "mitochondrion
organization" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0009792
GO:GO:0035046 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0002119 GO:GO:0005743 GO:GO:0018996
GO:GO:0000910 GO:GO:0042645 GO:GO:0017111 GO:GO:0007005
eggNOG:COG1223 GeneTree:ENSGT00560000077230 HOGENOM:HOG000231291
InterPro:IPR021911 Pfam:PF12037 EMBL:Z48583 PIR:T22612
RefSeq:NP_496210.2 HSSP:P28691 ProteinModelPortal:Q20748 SMR:Q20748
IntAct:Q20748 STRING:Q20748 PaxDb:Q20748 EnsemblMetazoa:F54B3.3
GeneID:174590 KEGG:cel:CELE_F54B3.3 UCSC:F54B3.3.1 CTD:174590
WormBase:F54B3.3 InParanoid:Q20748 OMA:NSKMAYS NextBio:884680
Uniprot:Q20748
Length = 595
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 186/462 (40%), Positives = 273/462 (59%)
Query: 48 QAENEYH-RARNQE-LVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVR 105
+AE E +AR QE ++ QEES + EQ R+ T E A K + E EK I+ ET R R
Sbjct: 137 RAEEELAMKARMQEESLRKQEESVKKQEQLRKQTIEHELALKHKYELEK--IDAET-RAR 193
Query: 106 AMAEAEGR---AHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQN 162
A A + R + KL E+ NR+ ++++ I T+ + IG GL L D+
Sbjct: 194 AKAARDNRDVNLEQMKLHEEENRKTVIEK-----------IKTSGELIGSGLNQFLNDKT 242
Query: 163 KXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKS 222
K YT + G V Y++ LG+PSL+RE+SR P L +KS
Sbjct: 243 KIAAAVGGLTALAVGWYTAKRGTGVTARYIESRLGKPSLVRETSRIT-PLEVL-KHPIKS 300
Query: 223 LRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKT 282
++ + + + V+L P+L++R+R ++ T+NTK +N FRN++FYGPPGTGKT
Sbjct: 301 VQ----MMTRQKKDPLNGVVLPPALERRLRDIAITTSNTKRNNGLFRNVMFYGPPGTGKT 356
Query: 283 MAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCE 342
+ A+ LA+ SGLDYA++TGGD+APLG V+ IH++FDWA KS++GL++FIDEADAFL +
Sbjct: 357 LFAKSLAQHSGLDYAVLTGGDIAPLGRDGVSAIHKVFDWASKSRKGLIVFIDEADAFLQK 416
Query: 343 RNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQE 402
R+K MSE R+ALNA LFRTG+QS+ +L +A+N+P D AV DR D+++EF LPG E
Sbjct: 417 RSKNGMSEDTRAALNAFLFRTGEQSRKFMLVVASNQPEQFDWAVNDRFDQLVEFTLPGME 476
Query: 403 ERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILM--EAAAKTEGFSG 460
ER ++L Y +++I + G S Q++++ D + E A KT G SG
Sbjct: 477 ERERILLQYFNEHIVTPATS--G-------SRSQRLKLDNF-DWVAKCNEVAKKTSGMSG 526
Query: 461 REIAKLMASVQAAVYGSENCVLDPSLF-REVVDYKVAEHQQR 501
RE++KL+ QA+ Y SE VL ++ R D V +H+ +
Sbjct: 527 RELSKLVIGWQASAYASETGVLTEAIVDRNTADAMV-QHEHK 567
>UNIPROTKB|H0Y2W2 [details] [associations]
symbol:ATAD3A "ATPase family AAA domain-containing protein
3A" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR021911 Pfam:PF12037 EMBL:AL645728 HGNC:HGNC:25567
ChiTaRS:ATAD3A ProteinModelPortal:H0Y2W2 PRIDE:H0Y2W2
Ensembl:ENST00000339113 Bgee:H0Y2W2 Uniprot:H0Y2W2
Length = 572
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 185/479 (38%), Positives = 265/479 (55%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + E ++ +Q R EE +Q Q +R T +
Sbjct: 105 LSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREM 164
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 165 ELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFR 224
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD +K +Y+ + V +++ LG+PSL+RE+SR
Sbjct: 225 AFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETSR-------- 276
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L S+ + V+L PSL+ R+R ++ AT NTK + + +RN+L
Sbjct: 277 -ITVLEALRHPIQVSRRLLSRPQDALEGVVLSPSLEARVRDIAIATRNTKKNRSLYRNIL 335
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +H+LFDWA S+RGLLLF
Sbjct: 336 MYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLF 395
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +SE R+ LNA L+RTG S +L LA+N+P D A+ DRI+E
Sbjct: 396 VDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINE 455
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAA 452
++ F LPGQEER +L+++Y DKY+ + + RL K Q K E A
Sbjct: 456 MVHFDLPGQEERERLVRMYFDKYVLKPATEGK---QRL-KLAQFDYGRK------CSEVA 505
Query: 453 AKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRK-LAAAGGG 510
TEG SGREIA+L S QA Y SE+ VL ++ V V +HQQ+ L A G G
Sbjct: 506 RLTEGMSGREIAQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEGPG 564
>UNIPROTKB|Q9NVI7 [details] [associations]
symbol:ATAD3A "ATPase family AAA domain-containing protein
3A" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0043066 GO:GO:0005743 GO:GO:0016049
GO:GO:0042645 EMBL:CH471183 GO:GO:0017111 CTD:55210 eggNOG:COG1223
HOGENOM:HOG000231291 HOVERGEN:HBG058506 OMA:MMDTRVQ
InterPro:IPR021911 Pfam:PF12037 EMBL:GU189416 EMBL:AK001571
EMBL:AK056099 EMBL:AK091144 EMBL:AL645728 EMBL:BC007803
EMBL:BC011814 EMBL:BC014101 EMBL:BC033109 EMBL:BC063607
IPI:IPI00295992 IPI:IPI00643435 RefSeq:NP_001164006.1
RefSeq:NP_001164007.1 RefSeq:NP_060658.3 UniGene:Hs.23413
ProteinModelPortal:Q9NVI7 SMR:Q9NVI7 DIP:DIP-33194N IntAct:Q9NVI7
MINT:MINT-1148423 STRING:Q9NVI7 PhosphoSite:Q9NVI7 DMDM:84028405
PaxDb:Q9NVI7 PRIDE:Q9NVI7 Ensembl:ENST00000378755
Ensembl:ENST00000378756 Ensembl:ENST00000536055 GeneID:55210
KEGG:hsa:55210 UCSC:uc001afz.2 GeneCards:GC01P001439
HGNC:HGNC:25567 MIM:612316 neXtProt:NX_Q9NVI7 PharmGKB:PA134872099
InParanoid:Q9NVI7 PhylomeDB:Q9NVI7 ChiTaRS:ATAD3A GenomeRNAi:55210
NextBio:59150 ArrayExpress:Q9NVI7 Bgee:Q9NVI7 CleanEx:HS_ATAD3A
Genevestigator:Q9NVI7 GermOnline:ENSG00000197785 Uniprot:Q9NVI7
Length = 634
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 185/479 (38%), Positives = 265/479 (55%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + E ++ +Q R EE +Q Q +R T +
Sbjct: 167 LSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREM 226
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 227 ELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFR 286
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD +K +Y+ + V +++ LG+PSL+RE+SR
Sbjct: 287 AFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETSR-------- 338
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L S+ + V+L PSL+ R+R ++ AT NTK + + +RN+L
Sbjct: 339 -ITVLEALRHPIQVSRRLLSRPQDALEGVVLSPSLEARVRDIAIATRNTKKNRSLYRNIL 397
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +H+LFDWA S+RGLLLF
Sbjct: 398 MYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLF 457
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +SE R+ LNA L+RTG S +L LA+N+P D A+ DRI+E
Sbjct: 458 VDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINE 517
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAA 452
++ F LPGQEER +L+++Y DKY+ + + RL K Q K E A
Sbjct: 518 MVHFDLPGQEERERLVRMYFDKYVLKPATEGK---QRL-KLAQFDYGRK------CSEVA 567
Query: 453 AKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRK-LAAAGGG 510
TEG SGREIA+L S QA Y SE+ VL ++ V V +HQQ+ L A G G
Sbjct: 568 RLTEGMSGREIAQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEGPG 626
>MGI|MGI:1919214 [details] [associations]
symbol:Atad3a "ATPase family, AAA domain containing 3A"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016049 "cell growth"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 MGI:MGI:1919214 GO:GO:0016021 GO:GO:0005524
GO:GO:0005743 GO:GO:0042645 GO:GO:0017111 EMBL:AL670236
EMBL:CH466594 CTD:55210 eggNOG:COG1223 GeneTree:ENSGT00560000077230
HOGENOM:HOG000231291 HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46
InterPro:IPR021911 Pfam:PF12037 EMBL:AF343079 EMBL:AK075921
EMBL:AK148974 EMBL:AK149702 EMBL:AK150037 EMBL:AK166099
EMBL:AK172038 EMBL:AK173141 EMBL:BC023301 EMBL:BC058373
EMBL:BC060036 IPI:IPI00126913 IPI:IPI00464208 RefSeq:NP_849534.2
UniGene:Mm.241152 ProteinModelPortal:Q925I1 SMR:Q925I1
DIP:DIP-32373N IntAct:Q925I1 STRING:Q925I1 PhosphoSite:Q925I1
PaxDb:Q925I1 PRIDE:Q925I1 Ensembl:ENSMUST00000030903 GeneID:108888
KEGG:mmu:108888 InParanoid:Q925I1 OMA:QRYDEQM NextBio:361415
Bgee:Q925I1 CleanEx:MM_ATAD3A Genevestigator:Q925I1
GermOnline:ENSMUSG00000029036 Uniprot:Q925I1
Length = 591
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 178/470 (37%), Positives = 261/470 (55%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + E ++ +Q R EE +Q Q +R T +
Sbjct: 118 LTEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAIRRATVEREM 177
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T +G G R
Sbjct: 178 ELRHKNEMLRVEAEARARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLLGEGFR 237
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD +K +Y+ + V Y++ LG+PSL+RE+SR
Sbjct: 238 AFVTDWDKVTATVAGLTLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETSR-------- 289
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L S+ + VIL PSL+ R+R ++ AT NTK + + +RN+L
Sbjct: 290 -ISVLEALRHPIQVSRRLVSRPQDALEGVILSPSLEARVRDIAIATRNTKKNKSLYRNVL 348
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +H++FDWA S+RGLLLF
Sbjct: 349 MYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRGLLLF 408
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +SE R+ LNA L RTG S +L LA+N+P D A+ DRIDE
Sbjct: 409 VDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDE 468
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLT-DDILMEA 451
++ F LP +EER +L+++Y DKY+ KP +Q++++ E
Sbjct: 469 MVCFALPQREERERLVRMYFDKYVL-----KPAT------EGKQRLKVAQFDYGKKCSEV 517
Query: 452 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQR 501
A TEG SGREIA+L + QA Y SE+ VL ++ V V +HQQ+
Sbjct: 518 AQLTEGMSGREIAQLAVAWQAMAYSSEDGVLTEAMMDARVQDAVQQHQQK 567
>UNIPROTKB|A7YWC4 [details] [associations]
symbol:ATAD3 "ATPase family AAA domain-containing protein
3" species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0042645 GO:GO:0017111 EMBL:BC134487 IPI:IPI00690620
RefSeq:NP_001098932.1 UniGene:Bt.64948 ProteinModelPortal:A7YWC4
STRING:A7YWC4 PRIDE:A7YWC4 Ensembl:ENSBTAT00000012676 GeneID:784353
KEGG:bta:784353 CTD:55210 eggNOG:COG1223
GeneTree:ENSGT00560000077230 HOGENOM:HOG000231291
HOVERGEN:HBG058506 InParanoid:A7YWC4 OMA:MMDTRVQ OrthoDB:EOG4ZCT46
NextBio:20926644 InterPro:IPR021911 Pfam:PF12037 Uniprot:A7YWC4
Length = 586
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 180/477 (37%), Positives = 261/477 (54%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + E ++ +Q R EE +Q Q +R T +
Sbjct: 118 LSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEALRRATVEREM 177
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 178 ELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFR 237
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD +K IY+ + V Y++ LG+PSL+RE+SR
Sbjct: 238 AFVTDWDKVTATVAGLTLLAVGIYSAKNATSVAGRYIEARLGKPSLVRETSR-------- 289
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L SK + V+L PSL+ R+R ++ AT NTK + + +RN+L
Sbjct: 290 -ITVLEALRHPIQVSRRLLSKPQDALEGVVLSPSLEARVRDIAIATRNTKKNKSLYRNVL 348
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G VT +H++FDWA S+RGLLLF
Sbjct: 349 MYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWASTSRRGLLLF 408
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +SE R+ LNA L RTG S +L LA+N+P D A+ DRIDE
Sbjct: 409 VDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDE 468
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAA 452
++ F LP +EER +L+++Y DKY+ + + RL K Q K E A
Sbjct: 469 MVSFELPQREERERLVRMYFDKYVLKPATEGK---QRL-KLAQFDYGKK------CSEIA 518
Query: 453 AKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGG 509
TEG SGREI++L + QA Y SE+ VL ++ V + +H+Q+ + A G
Sbjct: 519 QLTEGMSGREISQLAVAWQAMAYASEDGVLTEAMMDARVQDAIQQHRQKMQWLKAEG 575
>FB|FBgn0040237 [details] [associations]
symbol:bor "belphegor" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0017111
GeneTree:ENSGT00560000077230 InterPro:IPR021911 Pfam:PF12037
FlyBase:FBgn0040237 EMBL:AF227209 EMBL:AF227210
RefSeq:NP_001247135.1 RefSeq:NP_001247136.1 RefSeq:NP_524996.1
UniGene:Dm.1727 SMR:Q9VEX6 STRING:Q9VEX6 EnsemblMetazoa:FBtr0083276
EnsemblMetazoa:FBtr0305998 EnsemblMetazoa:FBtr0305999 GeneID:53565
KEGG:dme:Dmel_CG6815 UCSC:CG6815-RA CTD:53565 InParanoid:Q9VEX6
OMA:QKMAWLS GenomeRNAi:53565 NextBio:841412 Uniprot:Q9VEX6
Length = 604
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 176/462 (38%), Positives = 268/462 (58%)
Query: 48 QAENEYHRARNQE-LVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRA 106
Q +++ R R ++ L++ Q L + + + Q +A +RQT + E+ +E R++
Sbjct: 137 QYQDQLSRKRYEDQLLQQQRVQEENLRKQEESVQRQ-EAMRRQTIEHEIEM-KEKNRLKL 194
Query: 107 MA-EAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKXX 165
+ E +A + D+N + +A R + I T IG G A+LTD +K
Sbjct: 195 LEHELRAKARVDRENRDINLEKIRLKAQEHRTTVLEGIKTAGTVIGAGAEAMLTDWDKVL 254
Query: 166 XXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRG 225
+YT + V+ YV+ +G+P+L+ E+SR + + L L
Sbjct: 255 TAAGGLSLLALGVYTAKGATGVVSRYVEARIGKPTLVGETSR--FAFLDALKNPLHYL-- 310
Query: 226 GDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAA 285
K L +K + V+L+P L++R+R ++ AT NT+ + +RN+L +GPPGTGKTM A
Sbjct: 311 --KRLRAKPTDALQGVVLNPKLEERLRDIAIATKNTRINKGMYRNVLMHGPPGTGKTMFA 368
Query: 286 RELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNK 345
++LA SG+D+A+MTGGDVAP+G + VT IH++FDW+ S+RGLLLF+DEADAFL +R+
Sbjct: 369 KKLAEHSGMDFAIMTGGDVAPMGKEGVTAIHKVFDWSHTSRRGLLLFVDEADAFLRKRSS 428
Query: 346 TYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERF 405
+SE R+ALNA L+RT +Q+ +L LA+N P D A+ DR+DE++EF LPG EER
Sbjct: 429 EKISEDLRAALNAFLYRTSEQNPKFMLVLASNTPEQFDYAINDRLDEMVEFTLPGLEERE 488
Query: 406 KLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAK 465
+LL+LY DKY+ Q + G + FK + G T + AA EG SGREI+K
Sbjct: 489 RLLRLYFDKYVLQPAAA--GA--KRFKLDTFDY---GKT---CSKMAALCEGMSGREISK 538
Query: 466 LMASVQAAVYGSENCVLDPSLFREVVD--YKVAEHQQRRKLA 505
L S QAAVY SE+ +L + V+D Y A+ Q ++K+A
Sbjct: 539 LGVSWQAAVYASEDGLLTEKM---VLDRCYSAAQ-QHKQKMA 576
>UNIPROTKB|F1RJE4 [details] [associations]
symbol:LOC100525876 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0017111
GeneTree:ENSGT00560000077230 InterPro:IPR021911 Pfam:PF12037
OMA:QRYDEQM EMBL:FP102593 Ensembl:ENSSSCT00000003712 Uniprot:F1RJE4
Length = 593
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 179/479 (37%), Positives = 261/479 (54%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + E ++ +Q R EE +Q Q +R T +
Sbjct: 118 LSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEALRRATVEREM 177
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 178 ELRHKNEMLRVEAEARARAKAERENADITREQIRLKAAEHRQTILESIRTAGTLFGEGFR 237
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD +K +Y+ + V YV+ LG+PSL+RE+SR
Sbjct: 238 AFVTDWDKVTATVAGLTLLALGVYSAKNATSVAGRYVEARLGKPSLVRETSR-------- 289
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L SK + V+L PSL+ R+R L+ AT NT+ + + +RN+L
Sbjct: 290 -ITALEALRHPVQVGRRLLSKPQDALEGVVLSPSLEARVRDLAIATRNTRKNRSLYRNVL 348
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G VT +H++FDWA S+RGLLLF
Sbjct: 349 MYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAVHKVFDWASTSRRGLLLF 408
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +SE R+ LNA L RTG S +L LA+N+P D A+ DRIDE
Sbjct: 409 VDEADAFLRKRATEKISEGLRAPLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDE 468
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAA 452
++ F LP +EER +L+++Y DK++ + + RL K Q K E A
Sbjct: 469 IVSFDLPRREERERLVRMYFDKHVLKPATEGK---QRL-KLAQFDYGKK------CSEIA 518
Query: 453 AKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGGGS 511
TEG SGREI++L + QA Y SE+ VL ++ V + +H+Q+ + A S
Sbjct: 519 ELTEGMSGREISQLAVAWQAMAYASEDGVLTEAMMDARVQDAIQQHRQKMQWLKAEAAS 577
>UNIPROTKB|E1BRY8 [details] [associations]
symbol:ATAD3A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005743 GO:GO:0017111 GeneTree:ENSGT00560000077230
InterPro:IPR021911 Pfam:PF12037 OMA:QRYDEQM EMBL:AADN02040864
IPI:IPI00582603 Ensembl:ENSGALT00000002304 Uniprot:E1BRY8
Length = 604
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 178/474 (37%), Positives = 261/474 (55%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E + H+AR Q +L + + + +R +Q R EE +Q Q +R T +
Sbjct: 126 LSEETKQHQARAQYQDKLARQRYDEQMRQQQLANEENLRKQEESVQKQEAMRRATVEREM 185
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + ++ T G G R
Sbjct: 186 ELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESLKTAGMLFGEGFR 245
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD +K +Y+ + V Y++ LG+PSL+RE+SR +
Sbjct: 246 AFVTDWDKVTATVAGLTLLAVGVYSAKNATAVAGRYIEARLGKPSLVRETSR-----ITV 300
Query: 216 FSRTLKSLRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYG 275
++ G K L SK + V+L P L+ R+R ++ AT NTK + + +RN+L YG
Sbjct: 301 LEALKHPIKVG-KRLTSKAQDALEGVVLSPQLEARVRDIAIATRNTKKNKSLYRNILMYG 359
Query: 276 PPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDE 335
PPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT IH+LFDWA S+RGLLLF+DE
Sbjct: 360 PPGTGKTLFAKKLAVHSGMDYAIMTGGDVAPMGREGVTAIHKLFDWANTSRRGLLLFVDE 419
Query: 336 ADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLE 395
ADAFL +R +SE R+ LNA L RTG S +L LA+N+P D A+ DRIDE++
Sbjct: 420 ADAFLRKRATEKISEDLRATLNAFLHRTGQHSNKFMLVLASNQPEQFDWAINDRIDEMVN 479
Query: 396 FPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKT 455
F LP EER +L+++Y D+++ + + RL K Q K E A T
Sbjct: 480 FDLPQLEERERLVRMYFDRHVLKPATEGK---QRL-KLAQFDYGKK------CSEIARLT 529
Query: 456 EGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGG 509
EG SGREI++L + QAA Y SE+ VL ++ V V +H+Q+ + A G
Sbjct: 530 EGMSGREISQLAVAWQAAAYASEDGVLTEAMIDARVADAVQQHRQKMEWLKAEG 583
>UNIPROTKB|E2QZ61 [details] [associations]
symbol:ATAD3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0017111
GeneTree:ENSGT00560000077230 InterPro:IPR021911 Pfam:PF12037
OMA:QRYDEQM CTD:83858 EMBL:AAEX03003847 RefSeq:XP_536708.2
Ensembl:ENSCAFT00000030573 GeneID:479568 KEGG:cfa:479568
NextBio:20854736 Uniprot:E2QZ61
Length = 591
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 180/477 (37%), Positives = 264/477 (55%)
Query: 47 LQAENEYHRARNQELVKM-QEESSIRLEQARRATEEQIQAQKRQTERE----KAEIERET 101
L E H+AR Q K+ ++ +L+Q + EE ++ Q+ +++ +A +ERE
Sbjct: 118 LSEETRQHQARAQYQDKLARQRYDDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREM 177
Query: 102 -IR-----VRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
+R +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 178 ELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFR 237
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
+TD +K +Y+ + V Y++ LG+PSL+RE+SR
Sbjct: 238 TFVTDWDKVTATVAGLTLLALGVYSAKNATSVAGRYIEARLGKPSLVRETSR-------- 289
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L SK + V+L PSL+ R+R ++ AT NT + + +RN+L
Sbjct: 290 -ITVLEALRHPVQVSRRLLSKPQDALEGVVLSPSLEARVRDIAIATRNTMKNRSLYRNIL 348
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G VT +H++FDWA S+RGLLLF
Sbjct: 349 AYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWASTSRRGLLLF 408
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +SE R+ LNA L RTG S +L LA+N+P D AV DRIDE
Sbjct: 409 VDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAVNDRIDE 468
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAA 452
++ F LPG+EER +L+++Y DKY+ + + RL K Q K E A
Sbjct: 469 MVRFDLPGREERERLVRMYFDKYVLKPATEGK---QRL-KLAQFDYGKK------CSEIA 518
Query: 453 AKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGG 509
TEG SGREI++L + QA Y SE+ VL ++ V + +HQQ+ + A G
Sbjct: 519 QLTEGMSGREISQLAVAWQAMAYASEDGVLTEAMMDARVQDAMQQHQQKMQWLKAEG 575
>RGD|1305964 [details] [associations]
symbol:Atad3a "ATPase family, AAA domain containing 3A"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016049 "cell growth"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
PROSITE:PS00674 SMART:SM00382 RGD:1305964 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0042645 GO:GO:0017111 CTD:55210
eggNOG:COG1223 GeneTree:ENSGT00560000077230 HOGENOM:HOG000231291
HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46 InterPro:IPR021911
Pfam:PF12037 OMA:QRYDEQM EMBL:BC105762 IPI:IPI00365481
RefSeq:NP_001030094.1 UniGene:Rn.17450 ProteinModelPortal:Q3KRE0
IntAct:Q3KRE0 STRING:Q3KRE0 PRIDE:Q3KRE0 Ensembl:ENSRNOT00000045053
GeneID:298682 KEGG:rno:298682 InParanoid:Q3KRE0 NextBio:644164
ArrayExpress:Q3KRE0 Genevestigator:Q3KRE0 Uniprot:Q3KRE0
Length = 591
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 177/470 (37%), Positives = 259/470 (55%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + E ++ +Q R EE +Q Q +R T +
Sbjct: 118 LNEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAIRRATVEREM 177
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 178 ELRHKNEMLRVEAEARARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFR 237
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD +K +Y+ + V Y++ LG+PSL+RE+SR
Sbjct: 238 AFVTDWDKVTATVAGLTLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETSR-------- 289
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L S+ + VIL PSL+ R+R ++ AT NTK + + +RN+L
Sbjct: 290 -ISVLEALRHPIQVSRRLVSRPQDALEGVILSPSLEARVRDIAIATRNTKKNKSLYRNVL 348
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +H++FDWA S+RGLLLF
Sbjct: 349 MYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRGLLLF 408
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +SE R+ LNA L RTG S +L LA+N+P D A+ DRIDE
Sbjct: 409 VDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSNKFMLVLASNQPEQFDWAINDRIDE 468
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLT-DDILMEA 451
++ F LP +EER +L+++Y DKY+ KP +Q++++ E
Sbjct: 469 MVCFALPQREERERLVRMYFDKYVL-----KPAT------EGKQRLKVAQFDYGKKCSEV 517
Query: 452 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQR 501
A T G SGREIA+L + QA Y SE+ VL ++ V V +HQQ+
Sbjct: 518 AQLTAGMSGREIAQLAVAWQAMAYSSEDGVLTEAMMDARVQDAVQQHQQK 567
>UNIPROTKB|Q3KRE0 [details] [associations]
symbol:Atad3 "ATPase family AAA domain-containing protein
3" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
PROSITE:PS00674 SMART:SM00382 RGD:1305964 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0042645 GO:GO:0017111 CTD:55210
eggNOG:COG1223 GeneTree:ENSGT00560000077230 HOGENOM:HOG000231291
HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46 InterPro:IPR021911
Pfam:PF12037 OMA:QRYDEQM EMBL:BC105762 IPI:IPI00365481
RefSeq:NP_001030094.1 UniGene:Rn.17450 ProteinModelPortal:Q3KRE0
IntAct:Q3KRE0 STRING:Q3KRE0 PRIDE:Q3KRE0 Ensembl:ENSRNOT00000045053
GeneID:298682 KEGG:rno:298682 InParanoid:Q3KRE0 NextBio:644164
ArrayExpress:Q3KRE0 Genevestigator:Q3KRE0 Uniprot:Q3KRE0
Length = 591
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 177/470 (37%), Positives = 259/470 (55%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + E ++ +Q R EE +Q Q +R T +
Sbjct: 118 LNEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAIRRATVEREM 177
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 178 ELRHKNEMLRVEAEARARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFR 237
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD +K +Y+ + V Y++ LG+PSL+RE+SR
Sbjct: 238 AFVTDWDKVTATVAGLTLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETSR-------- 289
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L S+ + VIL PSL+ R+R ++ AT NTK + + +RN+L
Sbjct: 290 -ISVLEALRHPIQVSRRLVSRPQDALEGVILSPSLEARVRDIAIATRNTKKNKSLYRNVL 348
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +H++FDWA S+RGLLLF
Sbjct: 349 MYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRGLLLF 408
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +SE R+ LNA L RTG S +L LA+N+P D A+ DRIDE
Sbjct: 409 VDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSNKFMLVLASNQPEQFDWAINDRIDE 468
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLT-DDILMEA 451
++ F LP +EER +L+++Y DKY+ KP +Q++++ E
Sbjct: 469 MVCFALPQREERERLVRMYFDKYVL-----KPAT------EGKQRLKVAQFDYGKKCSEV 517
Query: 452 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQR 501
A T G SGREIA+L + QA Y SE+ VL ++ V V +HQQ+
Sbjct: 518 AQLTAGMSGREIAQLAVAWQAMAYSSEDGVLTEAMMDARVQDAVQQHQQK 567
>UNIPROTKB|Q5T9A4 [details] [associations]
symbol:ATAD3B "ATPase family AAA domain-containing protein
3B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 EMBL:CH471183
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000231291
HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46 InterPro:IPR021911
Pfam:PF12037 EMBL:AB033099 EMBL:AK128357 EMBL:AK290586
EMBL:AL157945 EMBL:BC002542 EMBL:BC009938 EMBL:BC018701
IPI:IPI00178879 IPI:IPI00306048 IPI:IPI00443780 RefSeq:NP_114127.3
UniGene:Hs.729021 ProteinModelPortal:Q5T9A4 SMR:Q5T9A4
IntAct:Q5T9A4 STRING:Q5T9A4 PhosphoSite:Q5T9A4 DMDM:74745646
PaxDb:Q5T9A4 PRIDE:Q5T9A4 Ensembl:ENST00000308647 GeneID:83858
KEGG:hsa:83858 UCSC:uc001afv.3 UCSC:uc001afw.2 UCSC:uc001afx.3
CTD:83858 GeneCards:GC01P001397 HGNC:HGNC:24007 MIM:612317
neXtProt:NX_Q5T9A4 PharmGKB:PA134993325 InParanoid:Q5T9A4
OMA:RGLLLFM PhylomeDB:Q5T9A4 ChiTaRS:ATAD3B GenomeRNAi:83858
NextBio:72857 ArrayExpress:Q5T9A4 Bgee:Q5T9A4 CleanEx:HS_ATAD3B
Genevestigator:Q5T9A4 GermOnline:ENSG00000160072 Uniprot:Q5T9A4
Length = 648
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 174/479 (36%), Positives = 258/479 (53%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E H+AR Q +L + + E ++ +Q R EE +Q Q +R T +
Sbjct: 119 LSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREM 178
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R EA RA + D+ R + +A+ R+ + +I T G G R
Sbjct: 179 ELRHKNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFR 238
Query: 156 AILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A +TD++K +Y+ + V +++ LG+PSL+RE+SR
Sbjct: 239 AFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSR-------- 290
Query: 216 FSRTLKSLRGG---DKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNML 272
L++LR + L S+ + V+L PSL+ R+R ++ AT NTK + +R++L
Sbjct: 291 -ITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHIL 349
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +H+LFDWA S+RGLLLF
Sbjct: 350 LYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLF 409
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDE 392
+DEADAFL +R +S+ R+ LNA L+ G S +L LA+N P D A+ RID
Sbjct: 410 MDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDV 469
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAA 452
++ F LP QEER +L++L+ D + + + G R K Q K E A
Sbjct: 470 MVHFDLPQQEERERLVRLHFDNCVLKPATE--G--KRRLKLAQFDYGRK------CSEVA 519
Query: 453 AKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQR-RKLAAAGGG 510
TEG SGREIA+L S QA Y S++ VL ++ V V +++Q+ R L A G G
Sbjct: 520 RLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPG 578
>UNIPROTKB|Q5T2N8 [details] [associations]
symbol:ATAD3C "ATPase family AAA domain-containing protein
3C" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 eggNOG:COG1223 HOGENOM:HOG000231291
HOVERGEN:HBG058506 OrthoDB:EOG4ZCT46 InterPro:IPR021911
Pfam:PF12037 EMBL:AL157945 EMBL:AK091918 EMBL:AK094502
EMBL:AL391244 EMBL:BC101211 EMBL:BC101212 IPI:IPI00513768
RefSeq:NP_001034300.2 UniGene:Hs.724767 ProteinModelPortal:Q5T2N8
SMR:Q5T2N8 IntAct:Q5T2N8 PhosphoSite:Q5T2N8 DMDM:162416279
PaxDb:Q5T2N8 PRIDE:Q5T2N8 Ensembl:ENST00000378785 GeneID:219293
KEGG:hsa:219293 UCSC:uc001aft.2 CTD:219293 GeneCards:GC01P001376
H-InvDB:HIX0023514 HGNC:HGNC:32151 neXtProt:NX_Q5T2N8
PharmGKB:PA134903201 OMA:WAINDID GenomeRNAi:219293 NextBio:90570
Bgee:Q5T2N8 Genevestigator:Q5T2N8 Uniprot:Q5T2N8
Length = 411
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 146/387 (37%), Positives = 219/387 (56%)
Query: 116 EAKLAEDVNRRMLVDRANAER--EKWIAAINTTFDHIGGGLRAILTDQNKXXXXXXXXXX 173
++KL + VN + + ++ + ++ +I G G RA +TD++K
Sbjct: 21 QSKLKQLVNEDLRKQEESVQKHHQTFLESIRAAGTLFGEGFRAFVTDRDKVTATVAGLTL 80
Query: 174 XXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGGDKELASK 233
+Y+ + V Y++ LG+PSL+RE+SR + ++ + L S+
Sbjct: 81 LAVGVYSAKNATAVTGRYIEARLGKPSLVRETSR-----ITVLEALRHPIQQVSRRLLSR 135
Query: 234 NGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSG 293
+ V+L PSL+ R+R ++ T N K + +R++L YGPPGTGKT+ A++LA SG
Sbjct: 136 PQDVLEGVVLSPSLEARVRDIAIMTRNIKKNRGLYRHILLYGPPGTGKTLFAKKLALHSG 195
Query: 294 LDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQR 353
+DYA+MTGGDVAP+G + VT +H+LFDWA S+RGLLLF+DEADAFL +R +SE R
Sbjct: 196 MDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRATEKISEDLR 255
Query: 354 SALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLD 413
+ LNA L+RTG S +L LA+ P D A+ ID ++ F LPGQEER +L+++YL+
Sbjct: 256 ATLNAFLYRTGQHSNKFMLILASCHPEQFDWAINACIDVMVHFDLPGQEERARLVRMYLN 315
Query: 414 KYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAA 473
+Y+ + + G R K Q K L E A TEG S R+IA+L S QA
Sbjct: 316 EYVLKPATE--G--KRRLKLAQFDYGRKCL------EIARLTEGMSCRKIAQLAVSWQAT 365
Query: 474 VYGSENCVLDPSLFREVVDYKVAEHQQ 500
Y S++ VL ++ V V +HQQ
Sbjct: 366 AYASKDGVLTEAMMDACVQDFVQQHQQ 392
>UNIPROTKB|Q5SV16 [details] [associations]
symbol:ATAD3A "ATPase family AAA domain-containing protein
3A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
HOGENOM:HOG000231291 EMBL:AL645728 HGNC:HGNC:25567 ChiTaRS:ATAD3A
UniGene:Hs.724767 Ensembl:ENST00000400830 Uniprot:Q5SV16
Length = 201
Score = 260 (96.6 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 50/83 (60%), Positives = 64/83 (77%)
Query: 287 ELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKT 346
+LA SG+DYA+MTGGDVAP+G + VT +H+LFDWA S+RGLLLF+DEADAFL +R
Sbjct: 1 KLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRATE 60
Query: 347 YMSEAQRSALNALLFRTGDQSKD 369
+SE R+ LNA L+RTG S +
Sbjct: 61 KISEDLRATLNAFLYRTGQHSNN 83
Score = 160 (61.4 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 43/101 (42%), Positives = 58/101 (57%)
Query: 371 VLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRL 430
+L LA+N+P D A+ DRI+E++ F LPGQEER +L+++Y DKY+ + + RL
Sbjct: 111 MLVLASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGK---QRL 167
Query: 431 FKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQ 471
K Q K E A TEG SGREIA+L S Q
Sbjct: 168 -KLAQFDYGRK------CSEVARLTEGMSGREIAQLAVSWQ 201
>POMBASE|SPCC24B10.10c [details] [associations]
symbol:yta4 "mitochondrial outer membrane ATPase
Msp1/Yta4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006626 "protein targeting to mitochondrion"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPCC24B10.10c
GO:GO:0005524 GO:GO:0006626 GO:GO:0005741 EMBL:CU329672
GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000225141
OMA:VINPLHI OrthoDB:EOG4BVW3J PIR:T50417 RefSeq:NP_588013.1
ProteinModelPortal:Q9P7J5 EnsemblFungi:SPCC24B10.10c.1
GeneID:2539116 KEGG:spo:SPCC24B10.10c NextBio:20800288
Uniprot:Q9P7J5
Length = 355
Score = 220 (82.5 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 60/164 (36%), Positives = 92/164 (56%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTK-IHQLFDWAKKSKR 327
+ +L YGPPG GKTM A+ LA++S + ++ G + K + LF A+K +
Sbjct: 126 KGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEP 185
Query: 328 GLLLFIDEADAFLCERNKT-YMSEAQRSALNALLFR--TGDQSKDIVLALATNRPGDLDS 384
++FIDE D FL +R +T + + AQ A ++ QS+ +VL ATNRP D+D
Sbjct: 186 -TIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSRVLVLG-ATNRPADIDE 243
Query: 385 AVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVH 428
A+ R+ +V PLP E+R K+L+LYL K +A G+V+
Sbjct: 244 AIRRRMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVN 287
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 206 (77.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 47/150 (31%), Positives = 91/150 (60%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F+ A+K+
Sbjct: 248 PPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 307
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++ FIDE D+ +R+KT E +R ++ LL G +++ ++V+ ATNRP +D
Sbjct: 308 SPSII-FIDEIDSIAPKRDKTN-GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSID 365
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P E R ++L+++
Sbjct: 366 PALRRFGRFDREVDIGVPDAEGRLEILRIH 395
Score = 175 (66.7 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 46/154 (29%), Positives = 83/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
AP + +LF+GPPGTGKT+ A+ +A + ++ + G ++ + ++ + I +FD A+
Sbjct: 520 APTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARA 579
Query: 325 SKRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRT-GDQSKDIVLAL-ATNRPG 380
+ ++F+DE D+ R ++ A +N LL G +K V + ATNRP
Sbjct: 580 AAP-TVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPD 638
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
+D A+ R+D+++ PLP + R +L+ L
Sbjct: 639 QIDPALLRPGRLDQLIYVPLPDEPARLSILQAQL 672
Score = 61 (26.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 443 LTDDILMEA-AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKV 495
L DD+ +EA A++T GF G +IA L + + ++D L E +D +V
Sbjct: 401 LADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLID--LEEETIDTEV 452
Score = 50 (22.7 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 60 ELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKL 119
E + + + + A +E +Q Q R+ + + ++E ETI + + +
Sbjct: 408 EAIASETHGFVGADIASLCSEAAMQ-QIRE-KMDLIDLEEETIDTEVL-------NSLGV 458
Query: 120 AEDVNRRMLVDRAN--AEREKWIAAINTTFDHIGG 152
+D N R + +N A RE + +N T+D IGG
Sbjct: 459 TQD-NFRFALGNSNPSALRETVVENVNVTWDDIGG 492
Score = 39 (18.8 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 448 LMEAAAKTEGFSGREIAKLMA-SVQAAVYGS 477
L E A T GFSG +++ ++ S + A+ S
Sbjct: 683 LNEIAKITHGFSGADLSYIVQRSAKFAIKDS 713
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 206 (77.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 47/150 (31%), Positives = 91/150 (60%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F+ A+K+
Sbjct: 248 PPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 307
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++ FIDE D+ +R+KT E +R ++ LL G +++ ++V+ ATNRP +D
Sbjct: 308 SPSII-FIDEIDSIAPKRDKTN-GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSID 365
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P E R ++L+++
Sbjct: 366 PALRRFGRFDREVDIGVPDAEGRLEILRIH 395
Score = 175 (66.7 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 46/154 (29%), Positives = 83/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
AP + +LF+GPPGTGKT+ A+ +A + ++ + G ++ + ++ + I +FD A+
Sbjct: 520 APTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARA 579
Query: 325 SKRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRT-GDQSKDIVLAL-ATNRPG 380
+ ++F+DE D+ R ++ A +N LL G +K V + ATNRP
Sbjct: 580 AAP-TVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPD 638
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
+D A+ R+D+++ PLP + R +L+ L
Sbjct: 639 QIDPALLRPGRLDQLIYVPLPDEPARLSILQAQL 672
Score = 61 (26.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 443 LTDDILMEA-AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKV 495
L DD+ +EA A++T GF G +IA L + + ++D L E +D +V
Sbjct: 401 LADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLID--LEEETIDTEV 452
Score = 50 (22.7 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 60 ELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKL 119
E + + + + A +E +Q Q R+ + + ++E ETI + + +
Sbjct: 408 EAIASETHGFVGADIASLCSEAAMQ-QIRE-KMDLIDLEEETIDTEVL-------NSLGV 458
Query: 120 AEDVNRRMLVDRAN--AEREKWIAAINTTFDHIGG 152
+D N R + +N A RE + +N T+D IGG
Sbjct: 459 TQD-NFRFALGNSNPSALRETVVENVNVTWDDIGG 492
Score = 39 (18.8 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 448 LMEAAAKTEGFSGREIAKLMA-SVQAAVYGS 477
L E A T GFSG +++ ++ S + A+ S
Sbjct: 683 LNEIAKITHGFSGADLSYIVQRSAKFAIKDS 713
>ASPGD|ASPL0000002098 [details] [associations]
symbol:AN6263 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AACD01000107 EMBL:BN001301 eggNOG:COG0464
GO:GO:0017111 RefSeq:XP_663867.1 ProteinModelPortal:Q5AZL7
EnsemblFungi:CADANIAT00006727 GeneID:2871165 KEGG:ani:AN6263.2
HOGENOM:HOG000165049 OMA:RTSHREL OrthoDB:EOG4936S0 Uniprot:Q5AZL7
Length = 956
Score = 223 (83.6 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 54/145 (37%), Positives = 80/145 (55%)
Query: 271 MLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGP-QAVTKIHQLFDWAKKSKRGL 329
+L YGPPGTGKT+ A+ +AR+SG ++G +V + + + +F AKK
Sbjct: 687 LLLYGPPGTGKTLLAKAVARESGATVLEVSGSEVYDMYVGEGEKNVKAIFTLAKKLNP-C 745
Query: 330 LLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDI--VLALATNRPGDLDSAVA 387
++FIDEADA C R + R +N L R D D+ + +ATNRP DLD AV
Sbjct: 746 VVFIDEADAIFCSRTGASSRTSHRELINQFL-REWDGMNDLSTFIMVATNRPFDLDDAVL 804
Query: 388 DRIDEVLEFPLPGQEERFKLLKLYL 412
R+ L LP +++R +LK++L
Sbjct: 805 RRLPRRLLVDLPTEQDRLAILKIHL 829
Score = 41 (19.5 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 448 LMEAAAKTEGFSGREIAKLMASVQAAVYGSENCV 481
L E A +T +SG ++ L + A EN +
Sbjct: 840 LAELARRTPLYSGSDLKNLCVAAALACVREENAL 873
Score = 41 (19.5 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 72 LEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKLAEDV 123
L + R +E +Q + + + E RE R+ + +HE KL V
Sbjct: 588 LRRTERVRDEWLQERTPKARSSETENNRE--RLISSLRKTCNSHEKKLLNGV 637
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 202 (76.2 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 49/150 (32%), Positives = 86/150 (57%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPG+GKT AR +A ++G + L+ G +V + + +A + + F+ A+K+
Sbjct: 240 PPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKN 299
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++ FIDE D+ +R KT E +R ++ LL G +S+ +V+ ATNR +D
Sbjct: 300 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSID 357
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P RF++L+++
Sbjct: 358 PALRRFGRFDREIDIGVPDDNGRFEILRIH 387
Score = 167 (63.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
+P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+
Sbjct: 512 SPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARA 571
Query: 325 SKRGLLLFIDEADAFLCERNKTYM--SEAQRSALNALLFRTGD--QSKDIVLALATNRPG 380
+ +LF DE D+ +R + S A +N LL K++ ATNRP
Sbjct: 572 AAP-CVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPE 630
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R+D+++ PLP R +L L K
Sbjct: 631 LLDEALLRPGRLDQLIYIPLPDLGARISILTAILRK 666
Score = 61 (26.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 443 LTDDI-LMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAE 497
L+ D+ L E A+ T GF G ++A+L + V+D L E++D +V E
Sbjct: 393 LSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVID--LEDEIIDKEVLE 446
Score = 49 (22.3 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 452 AAKTEGFSGREIAKL-MASVQAAV 474
A KT GFSG ++A+L + +AA+
Sbjct: 679 AQKTAGFSGADLAELCQRAARAAI 702
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 202 (76.2 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 49/150 (32%), Positives = 86/150 (57%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPG+GKT AR +A ++G + L+ G +V + + +A + + F+ A+K+
Sbjct: 240 PPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKN 299
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++ FIDE D+ +R KT E +R ++ LL G +S+ +V+ ATNR +D
Sbjct: 300 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSID 357
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P RF++L+++
Sbjct: 358 PALRRFGRFDREIDIGVPDDNGRFEILRIH 387
Score = 167 (63.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
+P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+
Sbjct: 512 SPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARA 571
Query: 325 SKRGLLLFIDEADAFLCERNKTYM--SEAQRSALNALLFRTGD--QSKDIVLALATNRPG 380
+ +LF DE D+ +R + S A +N LL K++ ATNRP
Sbjct: 572 AAP-CVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPE 630
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R+D+++ PLP R +L L K
Sbjct: 631 LLDEALLRPGRLDQLIYIPLPDLGARISILTAILRK 666
Score = 61 (26.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 443 LTDDI-LMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAE 497
L+ D+ L E A+ T GF G ++A+L + V+D L E++D +V E
Sbjct: 393 LSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVID--LEDEIIDKEVLE 446
Score = 49 (22.3 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 452 AAKTEGFSGREIAKL-MASVQAAV 474
A KT GFSG ++A+L + +AA+
Sbjct: 679 AQKTAGFSGADLAELCQRAARAAI 702
>POMBASE|SPAC2G11.06 [details] [associations]
symbol:vps4 "AAA family ATPase Vps4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISS] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC2G11.06 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0010008
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043328 SMART:SM00745 GO:GO:0045053 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:L33456 PIR:T38572 RefSeq:NP_593086.1
ProteinModelPortal:Q09803 SMR:Q09803 STRING:Q09803
EnsemblFungi:SPAC2G11.06.1 GeneID:2542054 KEGG:spo:SPAC2G11.06
OrthoDB:EOG4V1B8K NextBio:20803129 Uniprot:Q09803
Length = 432
Score = 194 (73.4 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 52/161 (32%), Positives = 86/161 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P+ +L YGPPGTGK+ A+ +A ++G + ++ D+ +G ++ + QLF+ A++
Sbjct: 161 PWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMG-ESERLVRQLFEMARE 219
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDI--VLAL-ATNRPGD 381
K ++ FIDE D+ LC SE+ R L + KD VL L ATN P
Sbjct: 220 QKPSII-FIDEIDS-LCGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWT 277
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSR 422
LDSA+ R ++ + PLP R ++ +L + K ++ S+
Sbjct: 278 LDSAIRRRFEKRIYIPLPNAHARARMFELNVGKIPSELTSQ 318
Score = 56 (24.8 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 429 RLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFR 488
R+F+ KI + LT E A T+G+SG +I+ + V+ A+ + + F+
Sbjct: 302 RMFELNVGKIPSE-LTSQDFKELAKMTDGYSGSDISIV---VRDAIMEPVRRIHTATHFK 357
Query: 489 EVVDYK 494
EV D K
Sbjct: 358 EVYDNK 363
Score = 40 (19.1 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 206 SRGKYPWSGL 215
S G+ PWSG+
Sbjct: 156 SHGRKPWSGI 165
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 197 (74.4 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 71/221 (32%), Positives = 107/221 (48%)
Query: 220 LKSLRGGDKEL-ASKNGNGFGDVI----LHPSLQKRIRQLSGATANTKAHNAPFRNMLFY 274
LKS DK + +K F DV L++ + L T + +L
Sbjct: 261 LKSSEVADKSVDVAKTNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLT 320
Query: 275 GPPGTGKTMAARELARKSGLDYALMTGG--DVAPLGPQAVTKIHQLFDWAKKSKRGLLLF 332
GPPGTGKT+ AR A ++G+D+ M+G D +G A +I LF A+ S+ ++F
Sbjct: 321 GPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGA-KRIRDLFAQAR-SRAPAIIF 378
Query: 333 IDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLDSAVA--D 388
IDE DA +RN + A+++ LN LL Q+ I++ ATN P LD A+
Sbjct: 379 IDELDAIGGKRNPKDQAYAKQT-LNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPG 437
Query: 389 RIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHR 429
R D+V+ LP R +LK ++ K I A + P ++ R
Sbjct: 438 RFDKVVNVDLPDVRGRADILKHHMKK-ITLADNVDPTIIAR 477
Score = 64 (27.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 430 LFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSE-NCV-LDPSLF 487
+ K +KI + D ++ A T G SG E+A L+ QAAVY + N V +D S F
Sbjct: 456 ILKHHMKKITLADNVDPTII--ARGTPGLSGAELANLVN--QAAVYACQKNAVSVDMSHF 511
Query: 488 REVVDYKVAEHQQRRKL 504
D K+ +R+ +
Sbjct: 512 EWAKD-KILMGAERKTM 527
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 209 (78.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 56/153 (36%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF AK
Sbjct: 195 PPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVG-EGARMVRELFQMAK- 252
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
SK+ +LFIDE DA R E QR+ L + G D +I + +ATNRP
Sbjct: 253 SKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPD 312
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LDSA+ RID +EF LP E R + K++
Sbjct: 313 TLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIH 345
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 209 (78.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 56/153 (36%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF AK
Sbjct: 195 PPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVG-EGARMVRELFQMAK- 252
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
SK+ +LFIDE DA R E QR+ L + G D +I + +ATNRP
Sbjct: 253 SKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPD 312
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LDSA+ RID +EF LP E R + K++
Sbjct: 313 TLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIH 345
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 204 (76.9 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 48/150 (32%), Positives = 90/150 (60%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G +V + + ++ + + + F+ A+K+
Sbjct: 247 PPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKN 306
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++ FIDE D+ +R+KT E +R ++ LL G +++ ++V+ ATNRP +D
Sbjct: 307 APAII-FIDEIDSIAPKRDKTN-GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSID 364
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 365 PALRRFGRFDREVDIGIPDATGRLEVLRIH 394
Score = 182 (69.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 50/167 (29%), Positives = 86/167 (51%)
Query: 261 TKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLF 319
TK +P + +LFYGPPGTGKT+ A+ +A + ++ + G ++ + ++ + I +F
Sbjct: 514 TKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 573
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRT-GDQSKDIVLAL-A 375
D A+ + ++F+DE D+ R + A +N LL G +K V + A
Sbjct: 574 DKARAAAP-TVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGA 632
Query: 376 TNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAG 420
TNRP +D A+ R+D+++ PLP + R +L L K + G
Sbjct: 633 TNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPG 679
Score = 57 (25.1 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 443 LTDDILMEA-AAKTEGFSGREIAKL 466
L DD+ +EA AA+T G+ G +IA L
Sbjct: 400 LADDVDLEALAAETHGYVGADIASL 424
Score = 48 (22.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 124 NRRMLVDRAN--AEREKWIAAINTTFDHIGG 152
N R + +N A RE + ++N T+D +GG
Sbjct: 461 NFRFALGNSNPSALRETVVESVNVTWDDVGG 491
Score = 40 (19.1 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 449 MEAAAK-TEGFSGREIAKLMASVQAAVYGSENCV 481
+ A AK T+GFSG ++ ++ +AA Y ++ +
Sbjct: 682 LTAIAKATQGFSGADLLYIVQ--RAAKYAIKDSI 713
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 212 (79.7 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 49/150 (32%), Positives = 89/150 (59%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 234 PPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 293
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R+KT+ E +R ++ LL G +S +++ ATNRP +D
Sbjct: 294 SPAII-FIDEIDAIAPKRDKTH-GEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSID 351
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 352 PALRRFGRFDREIDIGIPDATGRLEVLRIH 381
Score = 173 (66.0 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 47/155 (30%), Positives = 78/155 (50%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + +FD A+ S
Sbjct: 507 PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKAR-S 565
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L K++ + ATNRP
Sbjct: 566 AAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDI 625
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP + R +LK L K
Sbjct: 626 IDPAILRPGRLDQLIYIPLPDDKSREAILKANLRK 660
Score = 49 (22.3 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 89 QTEREKAE-IERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTF 147
Q REK + I+ E ++ +AE A A E+ M +A RE + NTT+
Sbjct: 418 QQIREKMDLIDLEDDKI----DAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTW 473
Query: 148 DHIGG 152
IGG
Sbjct: 474 TDIGG 478
>TAIR|locus:2031005 [details] [associations]
symbol:AT1G50140 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010332
"response to gamma radiation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016926
"protein desumoylation" evidence=RCA] [GO:0032204 "regulation of
telomere maintenance" evidence=RCA] [GO:0032504 "multicellular
organism reproduction" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043247 "telomere
maintenance in response to DNA damage" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GO:GO:0005524 GO:GO:0017111
IPI:IPI00520428 RefSeq:NP_175433.2 UniGene:At.38089
ProteinModelPortal:F4I4Y6 SMR:F4I4Y6 PRIDE:F4I4Y6
EnsemblPlants:AT1G50140.1 GeneID:841436 KEGG:ath:AT1G50140
OMA:TRTIRRN Uniprot:F4I4Y6
Length = 1003
Score = 214 (80.4 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 57/153 (37%), Positives = 86/153 (56%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGP-QAVTKIHQLFDWAK 323
P + +L +GPPGTGKT+ A+ LA ++G ++ +TG + G + +TK LF +A
Sbjct: 748 PCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKA--LFSFAT 805
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR-TGDQSKD---IVLALATNRP 379
K +++F+DE D+ L R + EA R N + G +SKD I++ ATNRP
Sbjct: 806 KLAP-VIIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRP 864
Query: 380 GDLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
DLD AV R+ + LP E R K+LK++L
Sbjct: 865 FDLDDAVIRRLPRRIYVDLPDAENRLKILKIFL 897
Score = 46 (21.3 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 441 KGLTDDILMEAAAK-TEGFSGREIAKL 466
+ L D E AK TEG+SG ++ L
Sbjct: 900 ENLESDFQFEKLAKETEGYSGSDLKNL 926
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 202 (76.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 50/156 (32%), Positives = 83/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ A+ +A ++ + + G ++ +G + + + +F AK+
Sbjct: 203 PPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIG-EGASLVKDIFKLAKE 261
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
K ++FIDE DA +R E QR+ + L G D D+ + ATNRP
Sbjct: 262 -KAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPD 320
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R D ++E P P ++ R ++LK++ K
Sbjct: 321 ILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRK 356
Score = 46 (21.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 70 IRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAE 111
++ E +A +++++ + E EK E+ERE +++ M E E
Sbjct: 39 LKEELQEKARIAELESRILKLELEKKELERENLQL--MKENE 78
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 213 (80.0 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 50/150 (33%), Positives = 88/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 239 PPRGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 298
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +V+ ATNRP +D
Sbjct: 299 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVD 356
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
+A+ R D ++ +P R ++L+++
Sbjct: 357 AALRRFGRFDREIDIGIPDSTGRLEILQIH 386
Score = 165 (63.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 44/155 (28%), Positives = 78/155 (50%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + +FD A+++
Sbjct: 512 PSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQA 571
Query: 326 KRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R A +N +L + K++ + ATNRP
Sbjct: 572 AP-CILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDI 630
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP R +L+ L K
Sbjct: 631 IDPAILRPGRLDQLIYIPLPDMPSRTAILRANLRK 665
Score = 43 (20.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 443 LTDDI-LMEAAAKTEGFSGREIAKLM--ASVQA 472
L++D+ L + +A+T G G ++A L A++QA
Sbjct: 392 LSEDVDLEQISAETHGHVGADLAALCSEAALQA 424
Score = 41 (19.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 448 LMEAAAKTEGFSGREIAKL 466
LM + TEGFSG ++ ++
Sbjct: 674 LMYLSKITEGFSGADLTEI 692
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ + E L++ +R +E +Q
Sbjct: 454 FKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQ 496
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDSTGRLEILQIH 384
Score = 177 (67.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK 663
Score = 38 (18.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 452 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 208 (78.3 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 178 (67.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK 663
Score = 47 (21.6 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 60 ELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKL 119
E V + + + A +E +QA +++ + ++E ETI +AE A
Sbjct: 397 EQVANETHGHVGADLAALCSEAALQAIRKKMDL--IDLEDETI------DAEVMNSLAVT 448
Query: 120 AEDVNRRMLVDRANAEREKWIAAINTTFDHIGG 152
+D + +A RE + N T++ IGG
Sbjct: 449 MDDFRWALSQSNPSALRETVVEVPNITWEDIGG 481
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 188 (71.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 52/155 (33%), Positives = 84/155 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 254
Query: 327 RGLLLFIDEADAFLCERNKTYM----SEAQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F+DE D+ R ++ SE QR+ L L G + S I + +ATNR
Sbjct: 255 PSII-FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDI 313
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFP P +E RF +LK++ K
Sbjct: 314 LDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRK 348
Score = 57 (25.1 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 18/81 (22%), Positives = 36/81 (44%)
Query: 51 NEYHRARNQELVKMQEESSI---RLEQARRATEEQIQAQKRQTE--REKAEIERETIRVR 105
N+Y+ EL ++Q E S RLE R +++ + + + +E E ++V
Sbjct: 33 NKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVM 92
Query: 106 AMAEAEGRAH-EAKLAEDVNR 125
+ + H E K D+++
Sbjct: 93 GKNKVLVKVHPEGKYVVDIDK 113
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 203 (76.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 47/150 (31%), Positives = 89/150 (59%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F+ A+K+
Sbjct: 257 PPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 316
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++ FIDE D+ +R KT E +R ++ LL G +++ ++V+ ATNRP +D
Sbjct: 317 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSID 374
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 375 PALRRFGRFDREVDVGIPDPTGRLEILRIH 404
Score = 183 (69.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 47/152 (30%), Positives = 83/152 (54%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LF+GPPGTGKT+ A+ +A + ++ + G ++ + ++ + + +FD A+ +
Sbjct: 530 PSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAA 589
Query: 326 KRGLLLFIDEADAFLCERNKTYM-SEAQRSALNALLFRT-GDQSKDIVLAL-ATNRPGDL 382
++F+DE D+ R + S +N LL G SK V + ATNRP +
Sbjct: 590 AP-CVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQI 648
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
D A+ R+D+++ PLP +E RF +L+ L
Sbjct: 649 DPALMRPGRLDQLIYVPLPDEEARFSILQTQL 680
Score = 51 (23.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 443 LTDDI-LMEAAAKTEGFSGREIAKL 466
L DD+ L + AA+T G+ G ++A L
Sbjct: 410 LADDVDLEQIAAETHGYVGSDLASL 434
Score = 47 (21.6 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 431 FKSEQQKIEIKGLTDDILMEAAAK-TEGFSGREIAKLMASVQAAV 474
F Q ++ + +D+ + A AK T GFSG A L VQ AV
Sbjct: 673 FSILQTQLRHTPVAEDVDLRAVAKATHGFSG---ADLEFVVQRAV 714
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 203 (76.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 47/150 (31%), Positives = 89/150 (59%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F+ A+K+
Sbjct: 255 PPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 314
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++ FIDE D+ +R KT E +R ++ LL G +++ ++V+ ATNRP +D
Sbjct: 315 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSID 372
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 373 PALRRFGRFDREVDIGIPDPTGRLEILQIH 402
Score = 188 (71.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 52/156 (33%), Positives = 82/156 (52%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
+P R +LFYGPPGTGKTM A+ +A + ++ + G ++ + ++ + I +FD A+
Sbjct: 528 SPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARA 587
Query: 325 SKRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRT-GDQSKDIVLAL-ATNRPG 380
+ ++F+DE D+ R + A +N LL G SK V + ATNRP
Sbjct: 588 AAP-CIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE 646
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R+D ++ PLP + R +LK L K
Sbjct: 647 QLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRK 682
Score = 51 (23.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 443 LTDDI-LMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAE 497
L DD+ L + AA+T G+ G ++A L + + ++D L + +D +V +
Sbjct: 408 LGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLID--LDEDTIDAEVLD 461
Score = 48 (22.0 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 430 LFKSEQQKIEIKGLTDDI-LMEAAAKTEGFSGREIAKL-MASVQAAV 474
+ K++ +K + +DD+ L A KT GFSG ++ + +V+ A+
Sbjct: 675 ILKAQLRKTPV---SDDVDLQYIANKTHGFSGADLGFITQRAVKIAI 718
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 202 (76.2 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 47/150 (31%), Positives = 88/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F+ A+K+
Sbjct: 258 PPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 317
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++ FIDE D+ +R KT E +R ++ LL G +++ ++V+ ATNRP +D
Sbjct: 318 SPAII-FIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSID 375
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L ++
Sbjct: 376 PALRRFGRFDREVDIGIPDPTGRLEILSIH 405
Score = 190 (71.9 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 53/156 (33%), Positives = 83/156 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
+P R +LFYGPPGTGKTM A+ +A + ++ + G ++ + ++ + I +FD A+
Sbjct: 531 SPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARA 590
Query: 325 SKRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRT-GDQSKDIVLAL-ATNRPG 380
+ ++F+DE D+ R + A +N LL G SK V + ATNRP
Sbjct: 591 AAP-CVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE 649
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD+A+ R+D ++ PLP Q R +LK L K
Sbjct: 650 QLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRK 685
Score = 51 (23.0 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 430 LFKSEQQKIEIKGLTDDILME-AAAKTEGFSGREIAKL-MASVQAAVYGSENCVLDPSLF 487
+ K++ +K + D+ +E A+KT GFSG ++ + +V+ A+ S + ++
Sbjct: 678 ILKAQLRKTPV---ASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQ 734
Query: 488 REVV--DYKVAEHQQ 500
RE D K+ + ++
Sbjct: 735 REAAGEDVKMEDEEE 749
Score = 47 (21.6 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 443 LTDDILMEA-AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAE 497
L +D+ +E AA+T G+ G ++A L + + ++D L + +D +V +
Sbjct: 411 LGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLID--LDEDTIDAEVLD 464
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 195 (73.7 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 50/157 (31%), Positives = 89/157 (56%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
+P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 513 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 572
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSA---LNALLFRT-GDQSKDIVLAL-ATNRP 379
S +LF DE D+ +R + + +A +A LN LL G +K V + ATNRP
Sbjct: 573 SAP-CVLFFDELDSIATQRGNS-VGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 630
Query: 380 GDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP +E R+++ K L K
Sbjct: 631 DIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK 667
Score = 194 (73.4 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 46/150 (30%), Positives = 89/150 (59%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPG+GKT+ AR +A ++G + + G ++ + L ++ + + + F+ A+K+
Sbjct: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSKDIVLAL-ATNRPGDLD 383
++ FIDE D+ +R KT+ E +R ++ LL G +S+ V+ + ATNRP +D
Sbjct: 301 APSII-FIDEIDSIAPKREKTH-GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID 358
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P + R ++L+++
Sbjct: 359 PALRRFGRFDREIDIGVPDEIGRLEVLRIH 388
Score = 57 (25.1 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 428 HRLFKSEQQKIEIKGLTDDILMEAAAK-TEGFSGREIAKL-MASVQAAVYGSENCVLDPS 485
+++FKS +K + D+ + A AK T+GFSG +I ++ S + A+ EN D
Sbjct: 658 YQIFKSCLRKSPV---AKDVDLRALAKYTQGFSGADITEICQRSCKYAI--RENIEKDIE 712
Query: 486 LFREVVDYKVAEHQQRRKLAAAGGG 510
R+ + A + ++A G
Sbjct: 713 KERKRAESPEAMEEDEEEIAEIKAG 737
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 208 (78.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 176 (67.0 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 42 (19.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ +E AK T GFSG ++ ++
Sbjct: 669 DVDLEFLAKMTNGFSGADLTEI 690
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 452 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 208 (78.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 176 (67.0 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 42 (19.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ +E AK T GFSG ++ ++
Sbjct: 669 DVDLEFLAKMTNGFSGADLTEI 690
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 452 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 208 (78.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 176 (67.0 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 42 (19.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ +E AK T GFSG ++ ++
Sbjct: 669 DVDLEFLAKMTNGFSGADLTEI 690
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 452 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 208 (78.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 176 (67.0 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 42 (19.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ +E AK T GFSG ++ ++
Sbjct: 669 DVDLEFLAKMTNGFSGADLTEI 690
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 452 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 208 (78.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 176 (67.0 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 42 (19.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ +E AK T GFSG ++ ++
Sbjct: 669 DVDLEFLAKMTNGFSGADLTEI 690
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 452 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 208 (78.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 176 (67.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 42 (19.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ +E AK T GFSG ++ ++
Sbjct: 669 DVDLEFLAKMTNGFSGADLTEI 690
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 208 (78.3 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 183 (69.5 bits), Expect = 6.8e-10, Sum P(3) = 6.8e-10
Identities = 49/162 (30%), Positives = 87/162 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKY-IAQAG 420
+D A+ R+D+++ PLP ++ R +LK L K +A+AG
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAG 670
Score = 42 (19.8 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ +E AK T GFSG ++ ++
Sbjct: 671 DVDLEFLAKMTNGFSGADLTEI 692
Score = 38 (18.4 bits), Expect = 6.8e-10, Sum P(3) = 6.8e-10
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 452 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 208 (78.3 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 253 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 312
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 313 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 370
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 371 PALRRFGRFDREVDIGIPDATGRLEILQIH 400
Score = 176 (67.0 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 526 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 585
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 586 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI 644
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 645 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 679
Score = 42 (19.8 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ +E AK T GFSG ++ ++
Sbjct: 685 DVDLEFLAKMTNGFSGADLTEI 706
Score = 38 (18.4 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 468 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 510
>TAIR|locus:2137261 [details] [associations]
symbol:AT4G04180 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00543933 RefSeq:NP_192327.3
UniGene:At.34057 ProteinModelPortal:F4JGS0 SMR:F4JGS0 PRIDE:F4JGS0
EnsemblPlants:AT4G04180.1 GeneID:825733 KEGG:ath:AT4G04180
OMA:SEMHEAT Uniprot:F4JGS0
Length = 609
Score = 204 (76.9 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 53/150 (35%), Positives = 81/150 (54%)
Query: 265 NAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAK 323
N P R +LF GPPGTGKT AR +A ++G+ + V + ++ + +F A
Sbjct: 359 NRP-RAVLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQAN 417
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGD 381
+ G ++F+DE DAF R+ M EA R L+ LL + +Q K +V+ ATNR D
Sbjct: 418 ELPDGAIIFLDEIDAFAISRDSE-MHEATRRVLSVLLRQIDGFEQEKKVVVIAATNRKQD 476
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R D ++ F LP + R +++ Y
Sbjct: 477 LDPALISRFDSMIMFDLPDLQTRQEIIAQY 506
Score = 42 (19.8 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 441 KGLTDDILMEAAAKTEGFSGREI 463
K L+ L++ A TE SGR+I
Sbjct: 508 KQLSKPELVQLAQATEAMSGRDI 530
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 197 (74.4 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 54/160 (33%), Positives = 85/160 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A G+++ + + +G A I ++F +AK+
Sbjct: 165 PPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARI-IREMFGYAKE 223
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G D + +ATNRP
Sbjct: 224 HEP-CVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPD 282
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQ 418
LD A+ R+D +E PLP + R ++LK++L+K Q
Sbjct: 283 TLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQ 322
>TAIR|locus:2137777 [details] [associations]
symbol:AT4G27680 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161571 GO:GO:0000502
HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111 HOGENOM:HOG000225141
EMBL:AL035602 OMA:EMCRNAS ProtClustDB:CLSN2685508 EMBL:AY093063
EMBL:AY085265 EMBL:BT000126 EMBL:AK226334 IPI:IPI00547334
PIR:T05873 RefSeq:NP_194498.1 UniGene:At.32076
ProteinModelPortal:Q9T090 SMR:Q9T090 STRING:Q9T090 PaxDb:Q9T090
PRIDE:Q9T090 EnsemblPlants:AT4G27680.1 GeneID:828882
KEGG:ath:AT4G27680 TAIR:At4g27680 InParanoid:Q9T090
PhylomeDB:Q9T090 Genevestigator:Q9T090 Uniprot:Q9T090
Length = 398
Score = 197 (74.4 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 52/151 (34%), Positives = 86/151 (56%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYA-LMTGGDVAPLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPGTGKTM A+ +A++SG + + ++ A + +F A K
Sbjct: 118 PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKL 177
Query: 326 KRGLLLFIDEADAFLCERNKT-YMSEAQ-RSALNALL--FRTGDQSKDIVLALATNRPGD 381
+ ++ FIDE ++FL +R T + + A ++ AL F T ++ +VLA ATNRP +
Sbjct: 178 QPAII-FIDEVESFLGQRRSTDHEAMANMKTEFMALWDGFSTDPHARVMVLA-ATNRPSE 235
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
LD A+ R+ + E +P + ER ++LK+ L
Sbjct: 236 LDEAILRRLPQAFEIGIPDRRERAEILKVTL 266
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 198 (74.8 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 59/156 (37%), Positives = 82/156 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKK 324
P + L YGPPGTGKT+ AR A +SG + + + + G A + F AK+
Sbjct: 233 PPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKL-VRDAFALAKE 291
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSKDIVLALA-TNRPG 380
K ++FIDE DA +R +K+ E QR+ L L G S D V LA TNR
Sbjct: 292 -KAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVD 350
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ + R+D +EFPLP +E R +LK++ K
Sbjct: 351 TLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARK 386
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 209 (78.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 49/150 (32%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG-DQSKDIVLALATNRPGDLD 383
++ FIDE DA +R KT+ E +R ++ LL G Q +++ ATNRP +D
Sbjct: 297 APAII-FIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDSTGRLEILQIH 384
Score = 177 (67.4 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A+++
Sbjct: 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 570 AP-CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDI 628
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 629 IDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRK 663
Score = 38 (18.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 446 DILMEAAAK-TEGFSGREIAKL 466
D+ ++ AK T GFSG ++ ++
Sbjct: 669 DVDVDFLAKMTNGFSGADLTEI 690
Score = 38 (18.4 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQ 84
F W L Q+ R E+ ++ E LE +R +E +Q
Sbjct: 452 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 179 (68.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 67/229 (29%), Positives = 110/229 (48%)
Query: 195 ILGQPSLIRE-SSRGKYPWSGLFSRTLKSLRGGDKELA-SKNGNGFGDVI----LHPSLQ 248
I+G +L + S G SG+ S + S + +KE+ KN F DV L+
Sbjct: 316 IMGAAALQKYIGSLGGIGTSGVGSSSSYSPKELNKEITPEKNVKTFKDVKGCDDAKQELE 375
Query: 249 KRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL- 307
+ + L + T+ + +L G PGTGKT+ A+ +A ++G+ + G + +
Sbjct: 376 EVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMF 435
Query: 308 -GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-D 365
G A ++ LF AKK K ++FIDE DA R K + +++ L+ G +
Sbjct: 436 VGVGA-RRVRSLFQAAKK-KAPCIIFIDEIDAVGSTR-KQWEGHTKKTLHQLLVEMDGFE 492
Query: 366 QSKDIVLALATNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
Q++ I++ ATN P LD A+ R D + P P R ++L+LYL
Sbjct: 493 QNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYL 541
Score = 70 (29.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 16/41 (39%), Positives = 31/41 (75%)
Query: 441 KGLTDDILMEAAAK-TEGFSGREIAKLM--ASVQAAVYGSE 478
K +++D+ ++A A+ T GF+G ++A L+ A+++AAV G+E
Sbjct: 544 KPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAE 584
>UNIPROTKB|Q6AZT2 [details] [associations]
symbol:spast "Spastin" species:8355 "Xenopus laevis"
[GO:0001578 "microtubule bundle formation" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
GO:GO:0048487 GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
EMBL:BC077358 RefSeq:NP_001086725.1 UniGene:Xl.32426
ProteinModelPortal:Q6AZT2 SMR:Q6AZT2 GeneID:446560 KEGG:xla:446560
Xenbase:XB-GENE-947846 Uniprot:Q6AZT2
Length = 600
Score = 201 (75.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 357 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFSVAR 415
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQS--KDIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 416 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQ 474
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 475 ELDDAVLRRFTKRVYVALPNEETRLVLLKNLLSK 508
Score = 42 (19.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
L++ L + + TEG+SG +I L
Sbjct: 513 LSEKELTQLSRLTEGYSGSDITAL 536
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 71/213 (33%), Positives = 108/213 (50%)
Query: 211 PWSGLFSRTLKSLRGGDKELASKNGN-GFGDVILHPSLQKRIRQLSGA---TANTKAHNA 266
P L R L + K+ SKN GF DV S + + ++ + N K A
Sbjct: 305 PLMWLLYRQLSASNSPAKKRRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGA 364
Query: 267 PF-RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGP-QAVTKIHQLFDWAKK 324
R +L GPPGTGKT+ AR +A ++G+ + ++ + L + +I LF+ A+K
Sbjct: 365 RLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARK 424
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRT-GDQS--KDIVLALATNRPGD 381
+ ++ FIDE DA +R +++ E ++ LN LL G +S K IV+A ATNRP
Sbjct: 425 NSPSII-FIDELDAVGGKRGRSFNDERDQT-LNQLLTEMDGFESDTKVIVIA-ATNRPEA 481
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
LDSA+ R + P QE R K+L ++L
Sbjct: 482 LDSALCRPGRFSRKVLVAEPDQEGRRKILAIHL 514
>UNIPROTKB|Q5ZK92 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
"alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
NextBio:20824244 Uniprot:Q5ZK92
Length = 613
Score = 199 (75.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 54/154 (35%), Positives = 83/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 370 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 428
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQS--KDIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS +D +L + ATNRP
Sbjct: 429 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQ 487
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 488 ELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSK 521
Score = 44 (20.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKLM 467
LT L + A T+G+SG ++ L+
Sbjct: 526 LTQKELAQLARMTDGYSGSDLTALV 550
>UNIPROTKB|E1C6S3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
GeneTree:ENSGT00570000078874 IPI:IPI00599182 EMBL:AADN02011792
EMBL:AADN02011793 Ensembl:ENSGALT00000017279 ArrayExpress:E1C6S3
Uniprot:E1C6S3
Length = 592
Score = 199 (75.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 54/154 (35%), Positives = 83/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 349 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 407
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQS--KDIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS +D +L + ATNRP
Sbjct: 408 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQ 466
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 467 ELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSK 500
Score = 43 (20.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 505 LTQKELAQLARMTDGYSGSDLTAL 528
>UNIPROTKB|Q05AS3 [details] [associations]
symbol:spast "Spastin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0051260 GO:GO:0005815 GO:GO:0007049
Pfam:PF04212 eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:CR760974
EMBL:BC123973 RefSeq:NP_001016453.1 UniGene:Str.10574
ProteinModelPortal:Q05AS3 SMR:Q05AS3 STRING:Q05AS3
Ensembl:ENSXETT00000057121 GeneID:549207 KEGG:xtr:549207
Xenbase:XB-GENE-947839 Bgee:Q05AS3 Uniprot:Q05AS3
Length = 603
Score = 201 (75.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 360 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFSVAR 418
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQS--KDIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 419 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQ 477
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 478 ELDDAVLRRFTKRVYVSLPNEETRLLLLKNLLSK 511
Score = 41 (19.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
L + L + + TEG+SG +I L
Sbjct: 516 LNEKELTQLSRLTEGYSGSDITAL 539
>UNIPROTKB|F1NCJ3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001578 "microtubule
bundle formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0007109 "cytokinesis, completion of separation" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005768
GO:GO:0051260 Pfam:PF04212 GO:GO:0006888 GO:GO:0030496
GO:GO:0007109 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0034214 GeneTree:ENSGT00570000078874
OMA:HKSTPKT EMBL:AADN02011792 EMBL:AADN02011793 IPI:IPI00821045
Ensembl:ENSGALT00000037930 ArrayExpress:F1NCJ3 Uniprot:F1NCJ3
Length = 600
Score = 199 (75.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 54/154 (35%), Positives = 83/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 357 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 415
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQS--KDIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS +D +L + ATNRP
Sbjct: 416 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQ 474
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 475 ELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSK 508
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 513 LTQKELAQLARMTDGYSGSDLTAL 536
>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
symbol:spast "spastin" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IMP]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
Length = 570
Score = 200 (75.5 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 55/155 (35%), Positives = 84/155 (54%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 326 APARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSKYVG-EGEKLVRALFAVAR 384
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQS--KDIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS + VL + ATNRP
Sbjct: 385 ELQPSII-FIDEIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQ 443
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKY 415
+LD AV R + + LP +E R KLLK L K+
Sbjct: 444 ELDEAVLRRFAKRIYVALPTEETRLKLLKNLLSKH 478
Score = 39 (18.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
L+ L + A T+G+SG ++ L
Sbjct: 482 LSQKELSQLARLTDGYSGSDLTSL 505
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 193 (73.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 53/170 (31%), Positives = 92/170 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 210 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 268
Query: 327 RGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R ++ SE QR+ L L G + +K+I + +ATNR L
Sbjct: 269 PSII-FMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 327
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRL 430
DSA+ RID +EFP P ++ R ++LK++ K G R + ++
Sbjct: 328 DSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQI 377
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 193 (73.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 62/202 (30%), Positives = 97/202 (48%)
Query: 229 ELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPF--------RNMLFYGPPGTG 280
E+ K + D+ L K+I L A H F + +L +GPPGTG
Sbjct: 176 EVIEKPSEDYSDI---GGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTG 232
Query: 281 KTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADA 338
KT+ AR A ++ + + G + + G A + F+ AK+ K ++FIDE DA
Sbjct: 233 KTLLARACASQTNATFLKLAGPQLVQMFIGDGA-KMVRDAFNLAKE-KAPAIIFIDELDA 290
Query: 339 FLCERNKTYMS---EAQRSALNALLFRTGDQSKDIVLALA-TNRPGDLDSAV--ADRIDE 392
+R + +S E QR+ L L G + D V +A TNRP LD A+ + R+D
Sbjct: 291 IGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDR 350
Query: 393 VLEFPLPGQEERFKLLKLYLDK 414
+E P P +E R ++L+++ K
Sbjct: 351 KIELPHPNEESRARILQIHSRK 372
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 193 (73.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 62/202 (30%), Positives = 97/202 (48%)
Query: 229 ELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPF--------RNMLFYGPPGTG 280
E+ K + D+ L K+I L A H F + +L +GPPGTG
Sbjct: 176 EVIEKPSEDYSDI---GGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTG 232
Query: 281 KTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADA 338
KT+ AR A ++ + + G + + G A + F+ AK+ K ++FIDE DA
Sbjct: 233 KTLLARACASQTNATFLKLAGPQLVQMFIGDGA-KMVRDAFNLAKE-KAPAIIFIDELDA 290
Query: 339 FLCERNKTYMS---EAQRSALNALLFRTGDQSKDIVLALA-TNRPGDLDSAV--ADRIDE 392
+R + +S E QR+ L L G + D V +A TNRP LD A+ + R+D
Sbjct: 291 IGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDR 350
Query: 393 VLEFPLPGQEERFKLLKLYLDK 414
+E P P +E R ++L+++ K
Sbjct: 351 KIELPHPNEESRARILQIHSRK 372
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 185 (70.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 51/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 183 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG-EGSRMVRELFVMAREHA 241
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R ++ SE QR+ L L G + +K+I + +ATNR L
Sbjct: 242 PSII-FMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 300
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
D A+ RID +EFP P +E R +LK++ K
Sbjct: 301 DPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 334
Score = 49 (22.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 16/103 (15%), Positives = 52/103 (50%)
Query: 47 LQAENEYHRARNQELVKMQEESSIRLEQARRATE-EQIQAQKRQTEREKAEIERETIRVR 105
++ E+ YH+ +Q+ ++L A + ++QAQ+ + K + RE ++
Sbjct: 7 MEIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNA-KVRMLREELQ-- 63
Query: 106 AMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFD 148
+ + +G ++ ++ + ++++ ++ + + E K++ ++ D
Sbjct: 64 -LLQEQG-SYVGEVVKPMDKKKVLVKVHPEG-KFVVDLDKNID 103
>TAIR|locus:2168646 [details] [associations]
symbol:AT5G53540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
HOGENOM:HOG000225141 EMBL:AB015476 OMA:VINPLHI EMBL:AY058857
EMBL:BT002644 IPI:IPI00537305 RefSeq:NP_200166.1 UniGene:At.26650
ProteinModelPortal:Q9FJC9 SMR:Q9FJC9 PRIDE:Q9FJC9
EnsemblPlants:AT5G53540.1 GeneID:835436 KEGG:ath:AT5G53540
TAIR:At5g53540 InParanoid:Q9FJC9 PhylomeDB:Q9FJC9
ProtClustDB:CLSN2685508 Genevestigator:Q9FJC9 Uniprot:Q9FJC9
Length = 403
Score = 192 (72.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 54/152 (35%), Positives = 84/152 (55%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYA-LMTGGDVAPLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPGTGKTM A+ +AR+S + + ++ A + +F A K
Sbjct: 121 PQKGVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKL 180
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQ---RSALNALL--FRTGDQSKDIVLALATNRPG 380
+ ++ FIDE D+FL +R T +EA ++ AL F T ++ +VLA ATNRP
Sbjct: 181 QPAII-FIDEVDSFLGQRRSTD-NEAMSNMKTEFMALWDGFTTDQNARVMVLA-ATNRPS 237
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
+LD A+ R + E +P +ER ++LK+ L
Sbjct: 238 ELDEAILRRFPQSFEIGMPDCQERAQILKVVL 269
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 197 (74.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 65/245 (26%), Positives = 124/245 (50%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSK 326
R + GPPGTGKT+ A+ A ++G+ + ++G + + G A +++ LF A++
Sbjct: 321 RGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGA-SRVRDLFKTAREMA 379
Query: 327 RGLLLFIDEADAFLCERNKTYM--SEAQRSALNALLFRT-GDQSKDIVLALA-TNRPGDL 382
++ F+DE DA ER M ++ + + LN LL G + D V+ LA TNRP L
Sbjct: 380 PAII-FVDEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDIL 438
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEI 440
D A+ R D + +P E R ++ K++L+K ++ + S+ Q+++
Sbjct: 439 DKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKN 498
Query: 441 KGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENC-VLDPSLFREVVDYKVAEHQ 499
+ + + + AA T GF+G +IA + A + E+ +D F + ++ +A +
Sbjct: 499 EEI-EKLAGRLAALTPGFAGADIANC-CNEGALIAAREDAPAVDTYHFEQAIERVIAGLE 556
Query: 500 QRRKL 504
++ ++
Sbjct: 557 KKSRI 561
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 197 (74.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 65/245 (26%), Positives = 124/245 (50%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSK 326
R + GPPGTGKT+ A+ A ++G+ + ++G + + G A +++ LF A++
Sbjct: 321 RGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGA-SRVRDLFKTAREMA 379
Query: 327 RGLLLFIDEADAFLCERNKTYM--SEAQRSALNALLFRT-GDQSKDIVLALA-TNRPGDL 382
++ F+DE DA ER M ++ + + LN LL G + D V+ LA TNRP L
Sbjct: 380 PAII-FVDEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDIL 438
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEI 440
D A+ R D + +P E R ++ K++L+K ++ + S+ Q+++
Sbjct: 439 DKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKN 498
Query: 441 KGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENC-VLDPSLFREVVDYKVAEHQ 499
+ + + + AA T GF+G +IA + A + E+ +D F + ++ +A +
Sbjct: 499 EEI-EKLAGRLAALTPGFAGADIANC-CNEGALIAAREDAPAVDTYHFEQAIERVIAGLE 556
Query: 500 QRRKL 504
++ ++
Sbjct: 557 KKSRI 561
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 193 (73.0 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 55/172 (31%), Positives = 88/172 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 242 PPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG-EGARMVRELFEMAR- 299
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ ++F DE DA R +E QR+ L + G D +I + ATNRP
Sbjct: 300 TKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPN 359
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRL 430
LD A+ RID +EF LP E R + +++ + G R L+ RL
Sbjct: 360 TLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWE-LISRL 410
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 200 (75.5 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 48/150 (32%), Positives = 88/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L +GPPGTGKT+ AR +A ++G + L+ G +V + + ++ + + + F+ +K+
Sbjct: 243 PPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKN 302
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
+ +L FIDE DA +R KT E +R ++ LL G + + ++V+ ATNRP +D
Sbjct: 303 QPAIL-FIDEIDAIAPKREKTN-GEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSID 360
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 361 GALRRFGRFDREIDIGIPDAVGRLEILRIH 390
Score = 170 (64.9 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 46/156 (29%), Positives = 80/156 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + +FD A+ +
Sbjct: 516 PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAA 575
Query: 326 KRGLLLFIDEADAFLCERNKTYMSE---AQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+LF DE D+ R + A +N +L + K++ + ATNRP
Sbjct: 576 AP-CVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPD 634
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D AV R+D+++ PLP + R ++LK L K
Sbjct: 635 IIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRK 670
Score = 43 (20.2 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 428 HRLFKSEQQKIEIKGLTDDILMEAAAK-TEGFSGREIAKL 466
H++ K+ +K L+ D+ + AK T GFSG ++ ++
Sbjct: 661 HQILKASLRKTP---LSKDLDLTFLAKNTVGFSGADLTEI 697
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 133 NAEREKWIAAINTTFDHIGG 152
+A RE + NTT+ IGG
Sbjct: 468 SALREAVVETPNTTWSDIGG 487
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 19/91 (20%), Positives = 36/91 (39%)
Query: 43 DWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETI 102
D L Q NE H +L + E+++ +QI+ + + E +I+ E +
Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEAAL----------QQIREKMELIDLEDDQIDAEVL 448
Query: 103 RVRAMAEAEGRAHEAKLAEDVNRRMLVDRAN 133
A+ R + K + R +V+ N
Sbjct: 449 NSLAVTMENFRFAQGKSSPSALREAVVETPN 479
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 200 (75.5 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 48/150 (32%), Positives = 88/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L +GPPGTGKT+ AR +A ++G + L+ G +V + + ++ + + + F+ +K+
Sbjct: 243 PPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKN 302
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
+ +L FIDE DA +R KT E +R ++ LL G + + ++V+ ATNRP +D
Sbjct: 303 QPAIL-FIDEIDAIAPKREKTN-GEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSID 360
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 361 GALRRFGRFDREIDIGIPDAVGRLEILRIH 390
Score = 170 (64.9 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 46/156 (29%), Positives = 80/156 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + +FD A+ +
Sbjct: 516 PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAA 575
Query: 326 KRGLLLFIDEADAFLCERNKTYMSE---AQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+LF DE D+ R + A +N +L + K++ + ATNRP
Sbjct: 576 AP-CVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPD 634
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D AV R+D+++ PLP + R ++LK L K
Sbjct: 635 IIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRK 670
Score = 43 (20.2 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 428 HRLFKSEQQKIEIKGLTDDILMEAAAK-TEGFSGREIAKL 466
H++ K+ +K L+ D+ + AK T GFSG ++ ++
Sbjct: 661 HQILKASLRKTP---LSKDLDLTFLAKNTVGFSGADLTEI 697
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 133 NAEREKWIAAINTTFDHIGG 152
+A RE + NTT+ IGG
Sbjct: 468 SALREAVVETPNTTWSDIGG 487
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 19/91 (20%), Positives = 36/91 (39%)
Query: 43 DWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETI 102
D L Q NE H +L + E+++ +QI+ + + E +I+ E +
Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEAAL----------QQIREKMELIDLEDDQIDAEVL 448
Query: 103 RVRAMAEAEGRAHEAKLAEDVNRRMLVDRAN 133
A+ R + K + R +V+ N
Sbjct: 449 NSLAVTMENFRFAQGKSSPSALREAVVETPN 479
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 196 (74.1 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 59/176 (33%), Positives = 94/176 (53%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP 306
L++ I L + TK + +L G PGTGKT+ AR +A ++ + + +G +
Sbjct: 266 LEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEE 325
Query: 307 L--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG 364
+ G A +I +LF AKK ++FIDE DA +R+ S A R LN LL
Sbjct: 326 MFVGVGA-RRIRELFQAAKKHAP-CIVFIDEIDAVGSKRSSRDNS-AVRMTLNQLLVELD 382
Query: 365 --DQSKDIVLALATNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYI 416
+Q++ IV+ ATN P LD A+ R+D+ + PLP + R+++LK+Y +K +
Sbjct: 383 GFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNKIV 438
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 196 (74.1 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 59/176 (33%), Positives = 94/176 (53%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP 306
L++ I L + TK + +L G PGTGKT+ AR +A ++ + + +G +
Sbjct: 266 LEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEE 325
Query: 307 L--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG 364
+ G A +I +LF AKK ++FIDE DA +R+ S A R LN LL
Sbjct: 326 MFVGVGA-RRIRELFQAAKKHAP-CIVFIDEIDAVGSKRSSRDNS-AVRMTLNQLLVELD 382
Query: 365 --DQSKDIVLALATNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYI 416
+Q++ IV+ ATN P LD A+ R+D+ + PLP + R+++LK+Y +K +
Sbjct: 383 GFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKGRYEILKMYSNKIV 438
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 192 (72.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 64/220 (29%), Positives = 109/220 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 212 PPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG-EGARMVRELFEMAR- 269
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ ++F DE DA R +E QR+ L + G D +I + ATNRP
Sbjct: 270 TKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPN 329
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKI 438
LD A+ RID +EF LP E R +L+++ K +A + L+ RL S Q
Sbjct: 330 TLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHA-KSMAIDKDIRWELIARLCPS-QTGA 387
Query: 439 EIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSE 478
E++ + + M A + + + +VQ V G++
Sbjct: 388 ELRSVCTEAGMFAIRARRRVATEK--DFLDAVQKVVKGNQ 425
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 191 (72.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 52/153 (33%), Positives = 85/153 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 178 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG-EGSRMVRELFVMAREHA 236
Query: 327 RGLLLFIDEADAFLCERNKTYM--SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDLD 383
++ F+DE D+ R +T SE QR+ L L G + +K+I + +ATNR LD
Sbjct: 237 PSII-FMDEIDSIGSARLETGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLD 295
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
A+ RID +EFP P +E R +LK++ K
Sbjct: 296 QALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 328
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 192 (72.6 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 52/153 (33%), Positives = 84/153 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 179 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 237
Query: 327 RGLLLFIDEADAF--LCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLALATNRPGDLD 383
++ F+DE D+ E SE QR+ L L G + +K+I + +ATNR LD
Sbjct: 238 PSII-FMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 296
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
SA+ RID +EFP P +E R +LK++ K
Sbjct: 297 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 329
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 195 (73.7 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 50/158 (31%), Positives = 89/158 (56%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKK 324
+P R +L YGPPGTGKT+ A+ +A + G ++ G ++ + ++ +++ Q+F A
Sbjct: 350 SPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASL 409
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLF------RTGDQSKDIVLALATNR 378
+R ++FIDE DA LC + + +E ++ + +LL G + + +VL ATNR
Sbjct: 410 -RRPSIIFIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLG-ATNR 466
Query: 379 PGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
P LD+A+ R D+ +E +P ++R +L+ L K
Sbjct: 467 PHALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKK 504
>ASPGD|ASPL0000034586 [details] [associations]
symbol:AN3061 species:162425 "Emericella nidulans"
[GO:0005768 "endosome" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0045053 "protein retention in
Golgi apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0016125 "sterol
metabolic process" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001306 EMBL:AACD01000051 Pfam:PF04212 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
HOGENOM:HOG000225146 KO:K12196 OMA:FTGKRIP OrthoDB:EOG4V1B8K
RefSeq:XP_660665.1 ProteinModelPortal:Q5B8R9 SMR:Q5B8R9
STRING:Q5B8R9 EnsemblFungi:CADANIAT00010018 GeneID:2874497
KEGG:ani:AN3061.2 Uniprot:Q5B8R9
Length = 434
Score = 190 (71.9 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 49/149 (32%), Positives = 80/149 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P++ +L YGPPGTGK+ A+ +A ++ + ++ D+ +G ++ + QLF+ A++
Sbjct: 164 PWKGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMG-ESERLVKQLFNMARE 222
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALATNRPGD 381
+K ++ FIDE DA LC SEA R LL + G+ SK +++ ATN P
Sbjct: 223 NKPAII-FIDEVDA-LCGARGENDSEASRRIKTELLVQMDGVGNDSKGVLILGATNIPWQ 280
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKL 410
LD+A+ R + LP R K+ L
Sbjct: 281 LDAAIRRRFQRRVHISLPDINARMKMFML 309
Score = 43 (20.2 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 452 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDP-SLFREVVDYKVAEHQQRRKLAAAGGG 510
A ++EG+SG +I+ +VQ A+ + P + YK H+ + KL G
Sbjct: 327 AEQSEGYSGSDIS---IAVQDAL-------MQPIRKIQTATHYKKVLHEGQEKLTPCSPG 376
Query: 511 SN 512
N
Sbjct: 377 DN 378
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 190 (71.9 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 53/162 (32%), Positives = 86/162 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + L YGPPGTGKT+ AR +A + ++ + + +G A I ++F++A+
Sbjct: 174 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA-RLIREMFNYAR- 231
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G D + + +ATNRP
Sbjct: 232 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPD 291
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAG 420
LD A+ R+D +E PLP ++ R ++LK++ K IA+ G
Sbjct: 292 SLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALK-IAKHG 332
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 190 (71.9 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 53/162 (32%), Positives = 87/162 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + +G A I ++F++A++
Sbjct: 172 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESA-RLIREMFNYARE 230
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G DQ + + +ATNRP
Sbjct: 231 HQP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 289
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAG 420
LD A+ R+D +E PLP ++ R ++LK++ IA+ G
Sbjct: 290 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASG-IAKHG 330
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 190 (71.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 242
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 243 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 190 (71.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 242
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 243 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 190 (71.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 242
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 243 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 190 (71.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 242
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 243 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 190 (71.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 242
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 243 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 190 (71.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 242
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 243 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 190 (71.9 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 190 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 248
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 249 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 307
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 308 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 341
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 190 (71.9 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 192 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 250
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 251 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 309
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 310 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 343
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 190 (71.9 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 192 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 250
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 251 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 309
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 310 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 343
>RGD|1308494 [details] [associations]
symbol:Spast "spastin" species:10116 "Rattus norvegicus"
[GO:0001578 "microtubule bundle formation" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISO;ISS] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA;ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO;ISS] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISO;ISS] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISO;ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA;ISO] [GO:0034214 "protein hexamerization"
evidence=ISO;ISS] [GO:0043014 "alpha-tubulin binding"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=ISO;ISS]
[GO:0051013 "microtubule severing" evidence=ISO;ISS] [GO:0051260
"protein homooligomerization" evidence=ISO;ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0007109 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0043014
SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:BC166846
IPI:IPI00365573 RefSeq:NP_001102172.2 UniGene:Rn.41645
ProteinModelPortal:B2RYN7 SMR:B2RYN7 STRING:B2RYN7 PRIDE:B2RYN7
GeneID:362700 KEGG:rno:362700 UCSC:RGD:1308494 NextBio:680920
ArrayExpress:B2RYN7 Genevestigator:B2RYN7 Uniprot:B2RYN7
Length = 581
Score = 194 (73.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 338 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 396
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 397 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 455
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 456 ELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCK 489
Score = 43 (20.2 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 494 LTQKELAQLARMTDGYSGSDLTAL 517
>UNIPROTKB|F1M9D2 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
SMART:SM00745 GeneTree:ENSGT00570000078874 IPI:IPI00365573
Ensembl:ENSRNOT00000039375 ArrayExpress:F1M9D2 Uniprot:F1M9D2
Length = 581
Score = 194 (73.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 338 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 396
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 397 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 455
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 456 ELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCK 489
Score = 43 (20.2 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 494 LTQKELAQLARMTDGYSGSDLTAL 517
>UNIPROTKB|A2VDN5 [details] [associations]
symbol:SPAST "Spastin" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0007109
"cytokinesis, completion of separation" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] [GO:0051013 "microtubule
severing" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0043014 "alpha-tubulin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0048487 GO:GO:0008017 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 EMBL:BC133327 IPI:IPI00840116
RefSeq:NP_001075060.1 UniGene:Bt.46123 ProteinModelPortal:A2VDN5
SMR:A2VDN5 STRING:A2VDN5 Ensembl:ENSBTAT00000046919 GeneID:521442
KEGG:bta:521442 CTD:6683 HOVERGEN:HBG108502 InParanoid:A2VDN5
OMA:HKSTPKT OrthoDB:EOG4NZTTF NextBio:20873307 ArrayExpress:A2VDN5
Uniprot:A2VDN5
Length = 614
Score = 196 (74.1 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 371 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 429
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 430 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 488
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 489 ELDEAVLRRFTKRVYVSLPNEETRLLLLKNLLCK 522
Score = 41 (19.5 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T G+SG ++ L
Sbjct: 527 LTQKELAQLARMTNGYSGSDLTAL 550
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 190 (71.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 51/153 (33%), Positives = 81/153 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 218 PPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG-EGARMVRELFEMAR- 275
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ ++F DE DA R +E QR+ L + G D +I + ATNRP
Sbjct: 276 TKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPS 335
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ RID +EF LP E R +L+++
Sbjct: 336 TLDPALMRPGRIDRKIEFSLPDVEGRANILRIH 368
>UNIPROTKB|D4A0I3 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
RGD:1308494 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 GO:GO:0034214
OrthoDB:EOG4NZTTF IPI:IPI00947816 Ensembl:ENSRNOT00000068220
ArrayExpress:D4A0I3 Uniprot:D4A0I3
Length = 613
Score = 194 (73.4 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 370 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 428
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 429 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 487
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 488 ELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCK 521
Score = 43 (20.2 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 526 LTQKELAQLARMTDGYSGSDLTAL 549
>MGI|MGI:1858896 [details] [associations]
symbol:Spast "spastin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768 "endosome"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007109
"cytokinesis, completion of separation" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO] [GO:0008568 "microtubule-severing ATPase
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0034214 "protein hexamerization"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=ISO] [GO:0051013
"microtubule severing" evidence=ISO;IGI;IMP;IDA] [GO:0051260
"protein homooligomerization" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1858896 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AK129282 EMBL:BC046286 EMBL:AK007793
EMBL:AJ246002 IPI:IPI00420580 RefSeq:NP_001156342.1
RefSeq:NP_058658.2 UniGene:Mm.19804 ProteinModelPortal:Q9QYY8
SMR:Q9QYY8 STRING:Q9QYY8 PhosphoSite:Q9QYY8 PaxDb:Q9QYY8
PRIDE:Q9QYY8 Ensembl:ENSMUST00000024869 GeneID:50850 KEGG:mmu:50850
UCSC:uc008dnz.2 InParanoid:Q9QYY8 NextBio:307827 Bgee:Q9QYY8
CleanEx:MM_SPAST Genevestigator:Q9QYY8
GermOnline:ENSMUSG00000024068 Uniprot:Q9QYY8
Length = 614
Score = 194 (73.4 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 371 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 429
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 430 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 488
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 489 ELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCK 522
Score = 43 (20.2 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 527 LTQKELAQLARMTDGYSGSDLTAL 550
>UNIPROTKB|Q9UBP0 [details] [associations]
symbol:SPAST "Spastin" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IDA] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0043014 "alpha-tubulin
binding" evidence=IPI] [GO:0051013 "microtubule severing"
evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0034214 "protein hexamerization" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0007109 "cytokinesis,
completion of separation" evidence=IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0001578 "microtubule
bundle formation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0031410 "cytoplasmic
vesicle" evidence=IDA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 EMBL:CH471053 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0008219 GO:GO:0005768 GO:GO:0051260
GO:GO:0031410 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 PDB:3EAB PDBsum:3EAB GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OMA:HKSTPKT OrthoDB:EOG4NZTTF EMBL:AJ246001
EMBL:AJ246003 EMBL:AB029006 EMBL:BC150260 IPI:IPI00002707
IPI:IPI00219816 IPI:IPI00923524 IPI:IPI00923553 RefSeq:NP_055761.2
RefSeq:NP_955468.1 UniGene:Hs.468091 PDB:3VFD PDBsum:3VFD
ProteinModelPortal:Q9UBP0 SMR:Q9UBP0 IntAct:Q9UBP0 STRING:Q9UBP0
PhosphoSite:Q9UBP0 DMDM:12230611 PaxDb:Q9UBP0 PeptideAtlas:Q9UBP0
PRIDE:Q9UBP0 Ensembl:ENST00000315285 Ensembl:ENST00000345662
GeneID:6683 KEGG:hsa:6683 UCSC:uc002roc.3 GeneCards:GC02P032288
HGNC:HGNC:11233 HPA:HPA017311 MIM:182601 MIM:604277
neXtProt:NX_Q9UBP0 Orphanet:100985 PharmGKB:PA36063
InParanoid:Q9UBP0 PhylomeDB:Q9UBP0 ChiTaRS:SPAST
EvolutionaryTrace:Q9UBP0 GenomeRNAi:6683 NextBio:26047
ArrayExpress:Q9UBP0 Bgee:Q9UBP0 CleanEx:HS_SPAST
Genevestigator:Q9UBP0 Uniprot:Q9UBP0
Length = 616
Score = 194 (73.4 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 373 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 431
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 432 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 490
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 491 ELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCK 524
Score = 43 (20.2 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 529 LTQKELAQLARMTDGYSGSDLTAL 552
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 190 (71.9 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 52/154 (33%), Positives = 85/154 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 242
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 243 PSII-FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
DSA+ RID +EFP P +E R +LK++ K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335
Score = 40 (19.1 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 58 NQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETI--RVRAMAE 109
N E+V+ + S +R + E Q+ ++ + + +R + +VR + E
Sbjct: 8 NMEVVESKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLRE 61
>UNIPROTKB|F1PR99 [details] [associations]
symbol:SPAST "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0034214 "protein
hexamerization" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007109 "cytokinesis,
completion of separation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005768 GO:GO:0051260
Pfam:PF04212 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 GO:GO:0034214 GeneTree:ENSGT00570000078874 KO:K13254
CTD:6683 OMA:HKSTPKT EMBL:AAEX03010834 RefSeq:XP_850973.1
Ensembl:ENSCAFT00000009227 GeneID:608582 KEGG:cfa:608582
Uniprot:F1PR99
Length = 624
Score = 194 (73.4 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 55/154 (35%), Positives = 82/154 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 381 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 439
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 440 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 498
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 499 ELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCK 532
Score = 43 (20.2 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 537 LTQKELAQLARMTDGYSGSDLTAL 560
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 184 (69.8 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 71 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 128
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 129 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 188
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 189 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 221
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 189 (71.6 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 65/202 (32%), Positives = 98/202 (48%)
Query: 229 ELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPF--------RNMLFYGPPGTG 280
E+ K + D+ L K+I++L A H F + +L YGPPGTG
Sbjct: 158 EIDEKPTEEYSDI---GGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTG 214
Query: 281 KTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADA 338
KT+ AR A ++ Y + G + + G A + F AK+ K ++FIDE DA
Sbjct: 215 KTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKL-VRDAFALAKE-KGPTIIFIDELDA 272
Query: 339 FLCERNKTYMS---EAQRSALNALLFRTGDQSK-DIVLALATNRPGDLDSAV--ADRIDE 392
+R + +S E QR+ L L G S +I + ATNR LD A+ + R+D
Sbjct: 273 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDR 332
Query: 393 VLEFPLPGQEERFKLLKLYLDK 414
+EFPLP +E R +L+++ K
Sbjct: 333 KIEFPLPNEEARAHILQIHSRK 354
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 189 (71.6 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 51/153 (33%), Positives = 83/153 (54%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
SK+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 SKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP Q+ R + K++
Sbjct: 326 TLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIH 358
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 189 (71.6 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 50/153 (32%), Positives = 81/153 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 219 PPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG-EGARMVRELFEMAR- 276
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ ++F DE DA R +E QR+ L + G D +I + ATNRP
Sbjct: 277 TKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPN 336
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ RID +EF LP E R + +++
Sbjct: 337 TLDPALLRPGRIDRKVEFSLPDLEGRANIFRIH 369
Score = 42 (19.8 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 63 KMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERE-TIRVRAMAEAEGRAHEAKLAE 121
+MQEE S+++ + + E Q Q+ T + A+ + + I ++ +A+ E
Sbjct: 86 RMQEEQSLQVARCTKIIEAS-QPQQ-PTGLQNADTKSKYVINIKQIAKFVVGLGERLSPT 143
Query: 122 DVNRRMLVDRANAEREKW 139
D+ M R +R K+
Sbjct: 144 DIEEGM---RVGVDRHKY 158
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 198 (74.8 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 47/150 (31%), Positives = 87/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPG GKTM AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 235 PPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 294
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSKDIVLAL-ATNRPGDLD 383
++ FIDE D+ +R KT E +R ++ LL G +S+ V+ + ATNRP +D
Sbjct: 295 APSII-FIDEIDSIAPKREKT-QGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID 352
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++++++
Sbjct: 353 PALRRFGRFDREIDITIPDATGRLEIMRIH 382
Score = 176 (67.0 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 45/155 (29%), Positives = 81/155 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + +LFD A+++
Sbjct: 508 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQA 567
Query: 326 KRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRTGDQS--KDIVLALATNRPGD 381
+LF DE D+ R + A +N +L + K++ + ATNRP
Sbjct: 568 AP-CVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDI 626
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP R +LK L+K
Sbjct: 627 IDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNK 661
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 21/94 (22%), Positives = 38/94 (40%)
Query: 60 ELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKL 119
E V + + + A TE +Q + + + ++E ETI + +
Sbjct: 395 EAVANETHGYVGADLAALCTESALQCIREKMD--VIDLEDETISAEIL-------ESMSV 445
Query: 120 AEDVNRRML-VDRANAEREKWIAAINTTFDHIGG 152
+D R L + +A RE + TT++ IGG
Sbjct: 446 TQDHFRTALTLSNPSALRETVVEVPTTTWEDIGG 479
Score = 41 (19.5 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 446 DILME-AAAKTEGFSGREIAKL 466
D+ +E KT+GFSG ++ ++
Sbjct: 667 DVDLEFLGQKTQGFSGADLTEI 688
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 175 (66.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 50/154 (32%), Positives = 79/154 (51%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSK 326
+ +L GPPGTGKTM AR +A ++G+ + +G + + G A ++ LF AKK
Sbjct: 261 KGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGA-RRVRDLFSAAKKCS 319
Query: 327 RGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGD--QSKDIVLALATNRPGDLDS 384
++FIDE DA RN + + LN +L Q++ I++ ATN P LD
Sbjct: 320 P-CIIFIDEIDAIGGSRNPKDQ-QYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDK 377
Query: 385 AVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYI 416
A+ R D + P P E R ++L+ ++ K +
Sbjct: 378 ALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVL 411
Score = 64 (27.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 19/57 (33%), Positives = 36/57 (63%)
Query: 429 RLFKSEQQKIEIKGLTDDI-LMEAAAKTEGFSGREIAKLM--ASVQAAVYGSENCVL 482
++ +S K+ +K +D+ LM A T GFSG ++A L+ A+++AA+ GS++ +
Sbjct: 401 QILESHMSKV-LKA--EDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTM 454
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 188 (71.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 51/153 (33%), Positives = 83/153 (54%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R +LK++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHILKIH 358
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 48/153 (31%), Positives = 84/153 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYA-LMTGGDVAPLGPQAVTKIHQLFDWAKKSKR 327
+ +L YGPPGTGKT+ AR +A ++ ++ V ++ I ++F++AK+ +
Sbjct: 172 KGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQP 231
Query: 328 GLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPGDLD 383
++F+DE DA R S E QR+ + L G ++ ++ + +ATNRP LD
Sbjct: 232 -CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLD 290
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
A+ R+D +E PLP + R ++LK++ +K
Sbjct: 291 PALVRPGRLDRKIEIPLPNETARIEILKIHANK 323
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 48/153 (31%), Positives = 84/153 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYA-LMTGGDVAPLGPQAVTKIHQLFDWAKKSKR 327
+ +L YGPPGTGKT+ AR +A ++ ++ V ++ I ++F++AK+ +
Sbjct: 172 KGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQP 231
Query: 328 GLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPGDLD 383
++F+DE DA R S E QR+ + L G ++ ++ + +ATNRP LD
Sbjct: 232 -CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLD 290
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
A+ R+D +E PLP + R ++LK++ +K
Sbjct: 291 PALVRPGRLDRKIEIPLPNETARIEILKIHANK 323
>TAIR|locus:2038678 [details] [associations]
symbol:SKD1 "SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005771 "multivesicular body"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0016192 "vesicle-mediated transport" evidence=RCA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006869 "lipid transport"
evidence=RCA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016197
"endosomal transport" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0009506
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GO:GO:0016192
Pfam:PF04212 HSSP:Q01853 GO:GO:0017111 EMBL:AC006232 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005771 GO:GO:0007033
EMBL:AC005824 GO:GO:0010091 SMART:SM00745 HOGENOM:HOG000225146
UniGene:At.13265 KO:K12196 OMA:FTGKRIP EMBL:AF367297 EMBL:AY091684
IPI:IPI00544233 PIR:F84674 RefSeq:NP_180328.1 SMR:Q9ZNT0
IntAct:Q9ZNT0 STRING:Q9ZNT0 EnsemblPlants:AT2G27600.1 GeneID:817306
KEGG:ath:AT2G27600 TAIR:At2g27600 InParanoid:Q9ZNT0
ProtClustDB:CLSN2683515 Genevestigator:Q9ZNT0 Uniprot:Q9ZNT0
Length = 435
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 54/196 (27%), Positives = 95/196 (48%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P+R L YGPPGTGK+ A+ +A ++ + ++ D+ +G ++ + LF+ A++
Sbjct: 164 PWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMG-ESEKLVSNLFEMARE 222
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALATNRPGD 381
S ++ F+DE D+ R + SEA R LL + G + +++ ATN P
Sbjct: 223 SAPSII-FVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYA 281
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ-QKIEI 440
LD A+ R D+ + PLP + R + K++L +P + K+E ++
Sbjct: 282 LDQAIRRRFDKRIYIPLPEAKARQHMFKVHLGD--TPHNLTEPDFEYLGQKTEGFSGSDV 339
Query: 441 KGLTDDILMEAAAKTE 456
D+L E KT+
Sbjct: 340 SVCVKDVLFEPVRKTQ 355
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 181 (68.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 51/150 (34%), Positives = 82/150 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGG--DVAPLGPQAVTKIHQLFDWAKKSK 326
+ +L GPPGTGKT+ AR +A ++G+ + M+G D +G A ++ +LF+ A+ SK
Sbjct: 349 KGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEVYVGVGA-KRVRELFNQAR-SK 406
Query: 327 RGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLDS 384
++FIDE DA +RN+ + +++ LN LL QS +++ ATN P LD
Sbjct: 407 SPAIIFIDELDAIGAKRNERDAAYVKQT-LNQLLTELDGFSQSTGVIILAATNYPELLDK 465
Query: 385 AVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
A+ R D + LP R +LK ++
Sbjct: 466 ALTRPGRFDRKVVVDLPDVRGRMDILKHHM 495
Score = 58 (25.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 430 LFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSEN 479
+ K + ++I TD + A T GFSG ++ L+ QAA++ S N
Sbjct: 490 ILKHHMKNVQIS--TDVDVAVIARGTSGFSGADLENLVN--QAAIFASRN 535
>TIGR_CMR|CHY_2164 [details] [associations]
symbol:CHY_2164 "ATPase, AAA family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0019538 "protein metabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
KEGG:chy:CHY_2164 PATRIC:21277395
BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
Length = 411
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 72/240 (30%), Positives = 114/240 (47%)
Query: 220 LKSLRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGT 279
LKSL G ++ + S + ++L P K+ R + G + P +N++ YGPPG
Sbjct: 156 LKSLYGLEEAVESIEKSL--KIVLDPETSKKFRAM-GLSV-------P-KNIILYGPPGN 204
Query: 280 GKTMAARELARKSGLDYALMTGGDVAPLGPQ--AVTK-IHQLFDWAKKSKRGLLLFIDEA 336
GKT AR +A+ GL + ++ + G A K + +LF AK + R ++F DE
Sbjct: 205 GKTNFARTVAQAYGLPFFVVNASAIISSGQLVGAAEKTLLELFANAK-ALRPAIIFFDEI 263
Query: 337 DAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLALATNRPGDLDSAVA--DRIDE 392
DA +R ++ A +N LL + K D++L ATNR LD A+ R D+
Sbjct: 264 DAIAKKRRAETLNSASDILINILLTQMDGFEKVDDVLLIAATNRIDILDEAILRPGRFDQ 323
Query: 393 VLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ--QKIEIKGLTDDILME 450
+ P P +E R K L+L + I + + L+ L S + EIK + D L +
Sbjct: 324 KILIPNPDKEARKKYFDLFLGQKIEKGIDAE--LLEYLANSTEGFSVAEIKTIADSTLTD 381
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
+P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 512 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQ 571
Query: 325 SKRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRT-GDQSKDIVLAL-ATNRPG 380
S +LF DE D+ +R + A LN LL G +K V + ATNRP
Sbjct: 572 SAP-CVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPD 630
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+DSA+ R+D+++ PLP ++ R + K L K
Sbjct: 631 IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRK 666
Score = 190 (71.9 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 46/150 (30%), Positives = 88/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPG+GKT+ AR +A ++G + + G ++ + L ++ + + + F+ A+K+
Sbjct: 240 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSKDIVLAL-ATNRPGDLD 383
++ FIDE D+ +R KT E +R ++ LL G +S+ V+ + ATNRP +D
Sbjct: 300 APSII-FIDEIDSIAPKREKTN-GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID 357
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P + R ++L+++
Sbjct: 358 PALRRFGRFDREIDIGVPDEIGRLEVLRIH 387
>POMBASE|SPBP22H7.05c [details] [associations]
symbol:abo2 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBP22H7.05c GO:GO:0005524 EMBL:CU329671
GO:GO:0045944 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 EMBL:AB004535 RefSeq:NP_595602.1
ProteinModelPortal:Q9C0W2 EnsemblFungi:SPBP22H7.05c.1
GeneID:2541287 KEGG:spo:SPBP22H7.05c OrthoDB:EOG4N07QZ
NextBio:20802398 Uniprot:Q9C0W2
Length = 1201
Score = 194 (73.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 67/228 (29%), Positives = 109/228 (47%)
Query: 196 LGQPSLIRESSRGKYPWSGLFSRTLKSLRG-GDKELASKNG-NGFGDVILHPSLQKRIR- 252
LG S I + + + + +T++S ++E N G D+IL L++ +
Sbjct: 333 LGASSDIENAPSSQLHFGHIDEKTIRSTDPFANRENLDFNSIGGLEDIILQ--LKEMVML 390
Query: 253 QLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELA-----RKSGLDYALMTGGD-VAP 306
L H P R +LF+GPPGTGKT+ AR LA + + + L G D ++
Sbjct: 391 PLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSK 450
Query: 307 LGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG- 364
+A ++ LF+ A++ + ++ F DE D L + + S ++ LL G
Sbjct: 451 WVGEAERQLRLLFEEARRVQPSIIFF-DEIDG-LAPIRSSKQEQTHSSIVSTLLALMDGL 508
Query: 365 DQSKDIVLALATNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKL 410
D +V+ ATNRP DLD A+ R D FPLP ++ R K+L++
Sbjct: 509 DTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEI 556
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 192 (72.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/160 (33%), Positives = 89/160 (55%)
Query: 262 KAHNAPF-RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLF 319
K++ P R +L YGPPGTGKTM AR +A + G +++ G ++ + + ++ Q+F
Sbjct: 380 KSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 439
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG---DQSKDIVLAL- 374
A + ++FIDE DA LC + + SE ++ + +LL G + S+ VL L
Sbjct: 440 AEATL-RHPSIIFIDELDA-LCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLG 497
Query: 375 ATNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
ATNRP LD+A+ R D+ +E +P ++R +L+ L
Sbjct: 498 ATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLL 537
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 51/179 (28%), Positives = 87/179 (48%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPG KTM A+ LA +SGL++ + G ++ +G ++ + ++F A+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG-ESERAVREVFRKARA 718
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSE--AQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F DE DA ER + + A R L G +Q K++ + ATNRP
Sbjct: 719 VAPSIIFF-DELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDR 777
Query: 382 LDSAVADRIDEVLEFPLPGQEERFK---LLKLYLDKYIAQAGSRKPGLVHRLFKSEQQK 437
+D +A E L EE K ++K + + ++ R P + R ++ Q+K
Sbjct: 778 IDKIIA----VCKEAALLALEENIKADCIMKRHFTQALSIVTPRIPESLRRFYEDYQEK 832
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 64/202 (31%), Positives = 99/202 (49%)
Query: 229 ELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPF--------RNMLFYGPPGTG 280
E+ K + D+ L+K+I++L A H F + +L YGPPGTG
Sbjct: 160 EVDEKPTEDYNDI---GGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTG 216
Query: 281 KTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADA 338
KT+ AR A ++ + + G + + G A + F AK+ K ++FIDE DA
Sbjct: 217 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKL-VRDAFLLAKE-KSPCIIFIDEIDA 274
Query: 339 FLCERNKTYMS---EAQRSALNALLFRTGDQSKD-IVLALATNRPGDLDSAV--ADRIDE 392
+R + +S E QR+ L L G S D I + ATNR LD A+ + R+D
Sbjct: 275 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 334
Query: 393 VLEFPLPGQEERFKLLKLYLDK 414
+EFP P +E R ++L+++ K
Sbjct: 335 KIEFPHPTEEARGRILQIHSRK 356
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 63/202 (31%), Positives = 99/202 (49%)
Query: 229 ELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPF--------RNMLFYGPPGTG 280
E+ K + D+ L+K+I++L A H F + +L YGPPGTG
Sbjct: 161 EVDEKPTEDYNDI---GGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTG 217
Query: 281 KTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADA 338
KT+ AR A ++ + + G + + G A + F AK+ K ++FIDE DA
Sbjct: 218 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKL-VRDAFQLAKE-KAPCIIFIDEIDA 275
Query: 339 FLCERNKTYMS---EAQRSALNALLFRTGDQSKD-IVLALATNRPGDLDSAV--ADRIDE 392
+R + +S E QR+ L L G S + I + ATNR LD A+ + R+D
Sbjct: 276 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDR 335
Query: 393 VLEFPLPGQEERFKLLKLYLDK 414
+EFP P +E R ++L+++ K
Sbjct: 336 KIEFPHPTEEARARILQIHSRK 357
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/153 (33%), Positives = 83/153 (54%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF A+
Sbjct: 201 PPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFQMAR- 258
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
SK+ ++F DE DA R + +E QR+ L + G D +I + +ATNRP
Sbjct: 259 SKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPD 318
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R ++ K++
Sbjct: 319 TLDPALLRPGRLDRKVEFGLPDLESRTQIFKIH 351
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 190 (71.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 46/150 (30%), Positives = 88/150 (58%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPG+GKT+ AR +A ++G + + G ++ + L ++ + + + F+ A+K+
Sbjct: 240 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSKDIVLAL-ATNRPGDLD 383
++ FIDE D+ +R KT E +R ++ LL G +S+ V+ + ATNRP +D
Sbjct: 300 APSII-FIDEIDSIAPKREKTN-GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID 357
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P + R ++L+++
Sbjct: 358 PALRRFGRFDREIDIGVPDEIGRLEVLRIH 387
Score = 188 (71.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 49/157 (31%), Positives = 85/157 (54%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
+P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 512 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQ 571
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSA---LNALLFRT-GDQSKDIVLAL-ATNRP 379
S +LF DE D+ +R + +A LN LL G +K V + ATNRP
Sbjct: 572 SAP-CVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 630
Query: 380 GDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+DSA+ R+D+++ PLP ++ R + K L K
Sbjct: 631 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRK 667
Score = 48 (22.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 430 LFKSEQQKIEIKGLTDDILMEAAAK-TEGFSGREIAKL 466
+FK+ +K I D+ + A AK T+GFSG +I ++
Sbjct: 660 IFKAALRKSPI---AKDVDIGALAKYTQGFSGADITEI 694
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/160 (33%), Positives = 89/160 (55%)
Query: 262 KAHNAPF-RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLF 319
K++ P R +L YGPPGTGKTM AR +A + G +++ G ++ + + ++ Q+F
Sbjct: 380 KSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 439
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG---DQSKDIVLAL- 374
A + ++FIDE DA LC + + SE ++ + +LL G + S+ VL L
Sbjct: 440 AEATL-RHPSIIFIDELDA-LCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLG 497
Query: 375 ATNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
ATNRP LD+A+ R D+ +E +P ++R +L+ L
Sbjct: 498 ATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLL 537
Score = 177 (67.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 49/151 (32%), Positives = 79/151 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPG KTM A+ LA +SGL++ + G ++ +G ++ + ++F A+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG-ESERAVREIFRKARA 718
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSE--AQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F DE DA ER + + A R L G +Q K++ + ATNRP
Sbjct: 719 VAPSIIFF-DELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDR 777
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKL 410
+D A+ RID ++ PLP R ++L L
Sbjct: 778 IDKALMRPGRIDRIIYVPLPDAATRREILNL 808
>ZFIN|ZDB-GENE-060929-388 [details] [associations]
symbol:vps4a "vacuolar protein sorting 4a (yeast)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-060929-388
GO:GO:0005524 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 HOVERGEN:HBG057074 SMART:SM00745
CTD:27183 KO:K12196 EMBL:BC124488 IPI:IPI00804704
RefSeq:NP_001070077.1 UniGene:Dr.161728 ProteinModelPortal:Q08BZ6
SMR:Q08BZ6 STRING:Q08BZ6 PRIDE:Q08BZ6 GeneID:767670 KEGG:dre:767670
NextBio:20918061 Uniprot:Q08BZ6
Length = 440
Score = 178 (67.7 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 48/151 (31%), Positives = 82/151 (54%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LFD A+
Sbjct: 158 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFDLAR 216
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ RN+ A+R L+ G + D +L L ATN P
Sbjct: 217 QHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGILVLGATNIPWV 275
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
LD+A+ R ++ + PLP + R + +L+L
Sbjct: 276 LDAAIRRRFEKRIYIPLPEEPARSAMFRLHL 306
Score = 50 (22.7 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 443 LTDDILMEAAAKTEGFSGREIA 464
LT+ L + A KT+G+SG +I+
Sbjct: 313 LTEADLRQLARKTDGYSGADIS 334
Score = 38 (18.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 80 EEQIQAQKRQTEREKAEIERETIRVRAMA------EAEGRAHEAKLAEDVNRRML--VDR 131
++ I+ + TE +KA+ E +R+ A + AH K E + + + +DR
Sbjct: 7 QKAIELVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRGKCMQYLDR 66
Query: 132 A 132
A
Sbjct: 67 A 67
Score = 37 (18.1 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 246 SLQKRIRQLSGATANTKAHN 265
+LQK I ++ AT KA N
Sbjct: 5 TLQKAIELVTKATEEDKAKN 24
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 186 (70.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 51/153 (33%), Positives = 83/153 (54%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 210 PPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 267
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R + +E QR+ L + G D +I + +ATNRP
Sbjct: 268 TKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 327
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP R +LK++
Sbjct: 328 TLDPALMRPGRLDRKVEFALPDLAGRAHILKIH 360
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 186 (70.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 51/153 (33%), Positives = 83/153 (54%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 210 PPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 267
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R + +E QR+ L + G D +I + +ATNRP
Sbjct: 268 TKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 327
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP R +LK++
Sbjct: 328 TLDPALMRPGRLDRKVEFALPDLAGRAHILKIH 360
>DICTYBASE|DDB_G0268334 [details] [associations]
symbol:DDB_G0268334 "Probable 26S protease subunit
YTA6" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0268334 GO:GO:0005524 EMBL:AAFI02000003
eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
ProtClustDB:CLSZ2729356 RefSeq:XP_647261.1
ProteinModelPortal:Q55GC3 EnsemblProtists:DDB0202133 GeneID:8616066
KEGG:ddi:DDB_G0268334 InParanoid:Q55GC3 OMA:TENENEA Uniprot:Q55GC3
Length = 792
Score = 160 (61.4 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 47/154 (30%), Positives = 74/154 (48%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLF 319
K P + +L +GPPGTGKTM + +A + + ++ + +G + + LF
Sbjct: 547 KGLRIPPKGLLLFGPPGTGKTMIGKAIATQVKATFFSISASTLTSKWIG-EGEKMVRCLF 605
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR----TGDQSKDIVLALA 375
A+ ++ FIDE D+ L R + +EA R L + G+ ++L A
Sbjct: 606 AVARCFLPSVI-FIDEIDSLLAARTENE-NEASRRIKTEFLIQWDGVAGNAEDQMLLIGA 663
Query: 376 TNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLK 409
TNRP +LD A R+ + L PLP E R L+K
Sbjct: 664 TNRPDELDEAARRRMTKRLYIPLPDNESRLALVK 697
Score = 73 (30.8 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 59 QELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAE-IERE 100
QE +K Q+ R+EQ +R EQ Q ++R+ ERE+ E +ERE
Sbjct: 263 QEQIKQQKLQQQRIEQEQREKLEQEQ-RERERERERKEQLERE 304
Score = 55 (24.4 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 51 NEYHRARNQELV--KMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIR 103
N + + ++L+ K ++E +++Q + + Q Q+ + E+E+ E ERE R
Sbjct: 243 NTNYLSEQRQLIINKQEKEKQEQIKQQKLQQQRIEQEQREKLEQEQRERERERER 297
Score = 47 (21.6 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 426 LVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAA 473
LV L K+E +I DD + A+ ++G+SG ++ L S +AA
Sbjct: 695 LVKNLLKNENHEIS----PDD-MQNIASISDGYSGADMKSL--STEAA 735
Score = 42 (19.8 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 50 ENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQT 90
E E QE + + E + + R ++Q Q Q+RQ+
Sbjct: 277 EQEQREKLEQEQRERERERERKEQLEREKQQQQQQQQQRQS 317
Score = 39 (18.8 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 42 FDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREK 94
F+ Q +++ + + Q K+ E+ I+ Q + IQ QK+Q +E+
Sbjct: 77 FELEQQQQQDQNRQQQQQNKNKIINENIIQNLQKQIGHLACIQFQKQQLSKEQ 129
Score = 38 (18.4 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 13/75 (17%), Positives = 30/75 (40%)
Query: 64 MQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKLAEDV 123
+ E+ I++ + A ++ I Q ++ + + TI+ A + + L
Sbjct: 353 LDEDEVIKVGDFKSAKDQFIDNQISDKNKKNSNVVSNTIKKMAASSNPNPVPPSSLPGGK 412
Query: 124 NRRMLVDRANAEREK 138
RR + E+E+
Sbjct: 413 KRRFVPPVKQDEQEE 427
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/157 (36%), Positives = 82/157 (52%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAK 323
AP + L YGPPGTGKT+ AR A ++ + + G + + G A + F AK
Sbjct: 244 AP-KGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKL-VRDCFALAK 301
Query: 324 KSKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSKDIVLALA-TNRP 379
+ K ++FIDE DA +R K+ E QR+ L L G S D + LA TNR
Sbjct: 302 E-KAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRV 360
Query: 380 GDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ + R+D +EFPLP +E R +L+++ K
Sbjct: 361 DVLDPALLRSGRLDRKIEFPLPNEEARANILQIHSRK 397
>TAIR|locus:2024522 [details] [associations]
symbol:DAA1 "DUO1-activated ATPase 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048235 "pollen sperm cell differentiation"
evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 GO:GO:0017111 GO:GO:0048235
IPI:IPI00517535 RefSeq:NP_849842.1 UniGene:At.16450
ProteinModelPortal:F4I5A3 SMR:F4I5A3 PRIDE:F4I5A3
EnsemblPlants:AT1G64110.2 GeneID:842716 KEGG:ath:AT1G64110
OMA:KANPIVL Uniprot:F4I5A3
Length = 829
Score = 193 (73.0 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 51/154 (33%), Positives = 78/154 (50%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L +GPPGTGKTM A+ +A+++G + ++ + G + LF A K
Sbjct: 554 PCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDE-KNVRALFTLASK 612
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR-TGDQSKD---IVLALATNRPG 380
++F+DE D+ L +R + EA R N + G +K I++ ATNRP
Sbjct: 613 VSP-TIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPF 671
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
DLD A+ R + + LP E R K+L+ L K
Sbjct: 672 DLDEAIIRRFERRIMVGLPAVENREKILRTLLAK 705
Score = 46 (21.3 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 63 KMQEESS--IRLEQARRATE-EQIQAQKRQTEREK-AEIERETIRVRAMA---EAEGRAH 115
K +EESS ++ E + T+ E + + E EK A+ E+ T + +A E E R
Sbjct: 448 KTKEESSKEVKAESIKPETKTESVTTVSSKEEPEKEAKAEKVTPKAPEVAPDNEFEKRIR 507
Query: 116 -EAKLAEDVN 124
E AE++N
Sbjct: 508 PEVIPAEEIN 517
Score = 38 (18.4 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 450 EAAAKTEGFSGREIAKL 466
E A TEG++G ++ L
Sbjct: 716 ELAMMTEGYTGSDLKNL 732
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 137 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 196
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 197 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 254
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 255 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 314
Query: 411 YLDK 414
+ K
Sbjct: 315 HSRK 318
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 141 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 200
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 201 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 258
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 259 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 318
Query: 411 YLDK 414
+ K
Sbjct: 319 HSRK 322
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 188 (71.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 52/155 (33%), Positives = 84/155 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 254
Query: 327 RGLLLFIDEADAFLCERNKTYM----SEAQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F+DE D+ R ++ SE QR+ L L G + S I + +ATNR
Sbjct: 255 PSII-FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDI 313
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFP P +E RF +LK++ K
Sbjct: 314 LDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRK 348
Score = 38 (18.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 31 LSNFCFRHVYKFDWHLLQAENEYHR--ARNQEL---VKMQEESSIRLEQ 74
L + +H+++ L Q N +R A+ EL V+M E L++
Sbjct: 32 LKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQE 80
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 190 (71.9 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/160 (33%), Positives = 89/160 (55%)
Query: 262 KAHNAPF-RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLF 319
K++ P R +L YGPPGTGKTM AR +A + G +++ G ++ + + K+ Q+F
Sbjct: 380 KSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIF 439
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG---DQSKDIVLAL- 374
A + ++FIDE DA LC + + +E ++ + +LL G + S+ VL L
Sbjct: 440 AEATL-RHPSIIFIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLG 497
Query: 375 ATNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
ATNRP LD+A+ R D+ +E +P ++R +L+ L
Sbjct: 498 ATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLL 537
Score = 182 (69.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 50/151 (33%), Positives = 78/151 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPG KTM A+ LA +SGL++ + G ++ +G ++ + + F A+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG-ESERAVRETFRKARA 718
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSE--AQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F DE DA ER + + A R L G +Q KD+ + ATNRP
Sbjct: 719 VAPSIIFF-DELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDR 777
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKL 410
+D A+ RID ++ PLP R ++ KL
Sbjct: 778 IDKALMRPGRIDRIIYVPLPDAATRREIFKL 808
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 185 (70.2 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 56/156 (35%), Positives = 79/156 (50%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKK 324
P + L +GPPGTGKT+ AR A +S + + + + G A + F AK+
Sbjct: 218 PPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKL-VRDAFALAKE 276
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSKDIVLALA-TNRPG 380
K ++FIDE DA +R K E QR+ L L G S D V +A TNR
Sbjct: 277 -KSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVD 335
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ + R+D LEFPLP +E R +L+++ K
Sbjct: 336 TLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRK 371
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 185 (70.2 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 51/153 (33%), Positives = 79/153 (51%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFDWAKK 324
AP + ++ YG PGTGKT+ A+ +A + + TG D V + + Q+F AK+
Sbjct: 216 AP-KGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKE 274
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R T E QR+ L L G +S+ D+ + +ATNR
Sbjct: 275 QAPSIV-FIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRID 333
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ RID +E P P ++ R K+ ++
Sbjct: 334 SLDPALIRPGRIDRKIELPKPDEKTRQKIFTIH 366
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 149 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 208
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 209 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 266
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 267 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 326
Query: 411 YLDK 414
+ K
Sbjct: 327 HSRK 330
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 184 (69.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 50/146 (34%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 194 PPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 252
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQS ++ + +ATNR
Sbjct: 253 NSPSII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQD 311
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 312 TLDPALLRPGRLDRKIEFPLPDRRQK 337
Score = 42 (19.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 80 EEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEA 117
E+ I+ + R E+E + E R++++ G+ EA
Sbjct: 54 EDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEA 91
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 184 (69.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 156 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 215
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 216 LAGPQLVQMFIGDGAKL-VRDAFSLAKE-KAPSIIFIDELDAIGNKRFDSEKAGDREVQR 273
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 274 TMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 333
Query: 411 YLDK 414
+ K
Sbjct: 334 HSRK 337
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 184 (69.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 175 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 234
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 235 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 292
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 293 TMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 352
Query: 411 YLDK 414
+ K
Sbjct: 353 HSRK 356
>RGD|1305969 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4 homolog B (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005770 "late endosome" evidence=IEA;ISO]
[GO:0005774 "vacuolar membrane" evidence=IEA;ISO] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006813 "potassium ion transport"
evidence=IEA;ISO] [GO:0007032 "endosome organization"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010008 "endosome membrane" evidence=IEA;ISO] [GO:0016197
"endosomal transport" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=IEA;ISO] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA;ISO]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA;ISO] [GO:0033993 "response to lipid"
evidence=IEA;ISO] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:1305969 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
EMBL:CH474000 KO:K12196 OrthoDB:EOG4G1MGD CTD:9525 EMBL:BC099128
IPI:IPI00363819 RefSeq:NP_001020887.1 UniGene:Rn.25893 SMR:Q4KLL7
STRING:Q4KLL7 Ensembl:ENSRNOT00000003715 GeneID:360834
KEGG:rno:360834 UCSC:RGD:1305969 InParanoid:Q4KLL7 OMA:XKRTPWR
NextBio:674292 Genevestigator:Q4KLL7 Uniprot:Q4KLL7
Length = 444
Score = 168 (64.2 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 48/152 (31%), Positives = 80/152 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF A+
Sbjct: 166 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLG-ESEKLVKNLFQLAR 224
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALATNRPG 380
++K ++ FIDE D+ LC SEA R L + G + I++ ATN P
Sbjct: 225 ENKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPW 282
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
LDSA+ R ++ + PLP R + +L+L
Sbjct: 283 VLDSAIRRRFEKRIYIPLPEAHARAAMFRLHL 314
Score = 52 (23.4 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 19/105 (18%), Positives = 47/105 (44%)
Query: 36 FRHVYKFDWHLLQAENEYHRARNQELVKMQEESSIRLEQARR-ATEEQIQAQKRQTEREK 94
++H ++ H+++ E + +A+ K E R E+ + +++ + QK E +
Sbjct: 34 YQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLD-RAEKLKEYLKKKEKKPQKPMKEEQS 92
Query: 95 AEIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKW 139
++ + AE++ + KL + ++++R N KW
Sbjct: 93 GPVDEKGNDSDGEAESDD-PEKKKLQNQLQGAIVIERPNV---KW 133
Score = 46 (21.3 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 443 LTDDILMEAAAKTEGFSGREIA 464
LT+ E KT+G+SG +I+
Sbjct: 321 LTEADFQELGRKTDGYSGADIS 342
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 190 (71.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 44/149 (29%), Positives = 82/149 (55%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L +GPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F +K+
Sbjct: 242 PPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKN 301
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPGDLDS 384
+L FIDE DA +R K + +R L G +++ +V+ ATNRP +D
Sbjct: 302 SPAIL-FIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG 360
Query: 385 AVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 361 ALRRFGRFDREIDIGIPDAVGRLEILRIH 389
Score = 171 (65.3 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 46/156 (29%), Positives = 83/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + +FD A+ +
Sbjct: 515 PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAA 574
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSA---LNALLFRTGDQS--KDIVLALATNRPG 380
+LF DE D+ R + + +A +A +N +L + K++ + ATNRP
Sbjct: 575 AP-CVLFFDELDSIAKARGGS-VGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPD 632
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D AV R+D+++ PLP + R ++ K L K
Sbjct: 633 IIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK 668
Score = 45 (20.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 429 RLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFR 488
++FK+ +K + D L A T GFSG ++ ++ Q A C L R
Sbjct: 660 QIFKASLRKTPLSADLD--LNFLAKNTVGFSGADLTEIC---QRA------CKL---AIR 705
Query: 489 EVVDYKVAEHQQRRKLAAAG 508
E ++ ++ + ++R+ +A G
Sbjct: 706 ESIEREIRQEKERQDRSARG 725
Score = 43 (20.2 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 75 ARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANA 134
A +E IQ Q R+ + E ++E +TI +AE A E+ M +A
Sbjct: 417 ASLCSEAAIQ-QIRE-KMELIDLEDDTI------DAEVLNSLAVTMENFRFAMGKSSPSA 468
Query: 135 EREKWIAAINTTFDHIGG 152
RE + NTT+ IGG
Sbjct: 469 LREAVVETPNTTWSDIGG 486
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 190 (71.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 44/149 (29%), Positives = 82/149 (55%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L +GPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F +K+
Sbjct: 242 PPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKN 301
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPGDLDS 384
+L FIDE DA +R K + +R L G +++ +V+ ATNRP +D
Sbjct: 302 SPAIL-FIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG 360
Query: 385 AVA--DRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 361 ALRRFGRFDREIDIGIPDAVGRLEILRIH 389
Score = 171 (65.3 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 46/156 (29%), Positives = 83/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKS 325
P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + +FD A+ +
Sbjct: 515 PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAA 574
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSA---LNALLFRTGDQS--KDIVLALATNRPG 380
+LF DE D+ R + + +A +A +N +L + K++ + ATNRP
Sbjct: 575 AP-CVLFFDELDSIAKARGGS-VGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPD 632
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D AV R+D+++ PLP + R ++ K L K
Sbjct: 633 IIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK 668
Score = 45 (20.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 429 RLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFR 488
++FK+ +K + D L A T GFSG ++ ++ Q A C L R
Sbjct: 660 QIFKASLRKTPLSADLD--LNFLAKNTVGFSGADLTEIC---QRA------CKL---AIR 705
Query: 489 EVVDYKVAEHQQRRKLAAAG 508
E ++ ++ + ++R+ +A G
Sbjct: 706 ESIEREIRQEKERQDRSARG 725
Score = 43 (20.2 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 75 ARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANA 134
A +E IQ Q R+ + E ++E +TI +AE A E+ M +A
Sbjct: 417 ASLCSEAAIQ-QIRE-KMELIDLEDDTI------DAEVLNSLAVTMENFRFAMGKSSPSA 468
Query: 135 EREKWIAAINTTFDHIGG 152
RE + NTT+ IGG
Sbjct: 469 LREAVVETPNTTWSDIGG 486
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 184 (69.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 199 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 256
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 257 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 316
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 317 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 349
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 184 (69.8 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 179 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 238
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 239 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 296
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 297 TMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 356
Query: 411 YLDK 414
+ K
Sbjct: 357 HSRK 360
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 207 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 264
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 265 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 324
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 325 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 357
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>TAIR|locus:4010714050 [details] [associations]
symbol:AT5G52882 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 IPI:IPI00785844 RefSeq:NP_001078747.1
UniGene:At.23894 ProteinModelPortal:F4KHN5 SMR:F4KHN5 PRIDE:F4KHN5
EnsemblPlants:AT5G52882.1 GeneID:5008305 KEGG:ath:AT5G52882
OMA:LESERFY Uniprot:F4KHN5
Length = 829
Score = 191 (72.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 51/154 (33%), Positives = 77/154 (50%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L +GPPGTGKTM A+ +A ++G + ++ + G + LF A K
Sbjct: 550 PCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDE-KNVRALFTLAAK 608
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR-TGDQSKD---IVLALATNRPG 380
++F+DE D+ L +R + EA R N + G +K I++ ATNRP
Sbjct: 609 VSP-TIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKPGERILVLAATNRPF 667
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
DLD A+ R + + LP E R K+L+ L K
Sbjct: 668 DLDEAIIRRFERRIMVGLPSIESREKILRTLLSK 701
Score = 44 (20.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 455 TEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGGGS 511
TEG+SG ++ L + A Y P RE++ + + Q+R+K AG G+
Sbjct: 716 TEGYSGSDLKNLCIT---AAYR-------P--VRELIQQERLKDQERKKREEAGKGT 760
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 59/184 (32%), Positives = 92/184 (50%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 186 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 245
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 246 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDATGTKRFDSEKAGDREVQR 303
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D+ +EFP+P +E R +++++
Sbjct: 304 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQI 363
Query: 411 YLDK 414
+ K
Sbjct: 364 HSRK 367
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 209 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 266
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 267 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 326
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 327 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 359
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 54/156 (34%), Positives = 81/156 (51%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKK 324
AP + L YGPPGTGKT+ AR A ++ + + + + + + F AK+
Sbjct: 214 AP-KGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKE 272
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSKDIVLALA-TNRPG 380
K ++FIDE DA +R K+ E QR+ L L G S D V LA TNR
Sbjct: 273 -KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVD 331
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ + R+D +EFPLP ++ R ++L+++ K
Sbjct: 332 VLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRK 367
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 251 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 308
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 309 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 368
Query: 411 YLDK 414
+ K
Sbjct: 369 HSRK 372
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 251 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 308
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 309 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 368
Query: 411 YLDK 414
+ K
Sbjct: 369 HSRK 372
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 251 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 308
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 309 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 368
Query: 411 YLDK 414
+ K
Sbjct: 369 HSRK 372
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 253
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 254 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 311
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 312 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 371
Query: 411 YLDK 414
+ K
Sbjct: 372 HSRK 375
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 253
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 254 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 311
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 312 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 371
Query: 411 YLDK 414
+ K
Sbjct: 372 HSRK 375
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 188 (71.2 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 52/155 (33%), Positives = 87/155 (56%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKK 324
+P R +L YGPPGTGKTM AR +A + G +++ G ++ + + ++ Q+F A
Sbjct: 379 SPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATL 438
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG---DQSKDIVLAL-ATNRP 379
+ ++FIDE DA LC + + +E ++ + +LL G + S+ VL L ATNRP
Sbjct: 439 -RHPSIIFIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRP 496
Query: 380 GDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
LD+A+ R D+ +E +P ++R +L+ L
Sbjct: 497 HALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLL 531
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/122 (32%), Positives = 64/122 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPG KTM A+ LA +SGL++ + G ++ +G ++ + ++F A+
Sbjct: 654 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG-ESERAVREIFRKARA 712
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSE--AQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F DE DA ER + + A R L G +Q KD+ + ATNRP
Sbjct: 713 VAPSIIFF-DELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDR 771
Query: 382 LD 383
+D
Sbjct: 772 ID 773
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 175 (66.7 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 65/239 (27%), Positives = 115/239 (48%)
Query: 239 GDVILHPSLQKRIRQLSGATA-NTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYA 297
G + LQ+ +R L K P + +L +GPPGTGKT+ A+ +A ++GL +
Sbjct: 320 GQEYIKRELQEIVRILKNDEEFQNKGIYCP-KGVLLHGPPGTGKTLLAKAIAGEAGLPFF 378
Query: 298 LMTGGD-VAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYM----SEAQ 352
G D V A +++ LF + +S ++FIDE DA +R + +E +
Sbjct: 379 AANGTDFVEMFVGVAASRVKDLFA-SSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAERE 437
Query: 353 RSALNALLFRTGDQ--SKDIVLALATNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLL 408
+ L L G + + +++ ATNR LD A+ R D+++ LP ++ R +L
Sbjct: 438 QGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAIL 497
Query: 409 KLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLM 467
K++ +R ++ F+SE +K +++L E A TE F+G E+ ++
Sbjct: 498 KVH---------AR-----NKFFRSEDEK-------EELLQEVAENTEDFTGAELQNVL 535
Score = 61 (26.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 28/116 (24%), Positives = 50/116 (43%)
Query: 29 GSLSNFCFRHVYKFDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQK- 87
GSLS+F R K L ++ +R L+ SS ++ + EE ++ +
Sbjct: 31 GSLSSFVRRR--KPTEAKLSSKFNLFPSRRNGLITCCSTSSFESTESSVSQEEDAESNRL 88
Query: 88 ----RQTEREKAEIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKW 139
R+TERE+ E + +A + E + +A D +R +L R + +W
Sbjct: 89 FEKLRETERERLS-NMEELERKANVQLE---RQLVMASDWSRTLLTMRGKLKGTEW 140
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 184 (69.8 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F N+ L YGPPGTGKT+ AR A ++ +
Sbjct: 198 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 257
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 258 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPSIIFIDELDAIGTKRFDSEKAGDREVQR 315
Query: 354 SALNALLFRTGDQ-SKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKL 410
+ L L G Q + + + ATNR LD A+ + R+D +EFP+P +E R +++++
Sbjct: 316 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 375
Query: 411 YLDK 414
+ K
Sbjct: 376 HSRK 379
Score = 42 (19.8 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 66 EESSIRLEQARRATEEQIQAQKRQTERE----KAEIERETIRVRAMAE 109
E+ I E + +TEE +Q + R + E K+E+ R T ++AM +
Sbjct: 32 EQDGIGEEVLKMSTEEIVQ-RTRLLDSEIKIMKSEVLRVTHELQAMKD 78
>SGD|S000006377 [details] [associations]
symbol:VPS4 "AAA-ATPase involved in multivesicular body (MVB)
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA;IMP;IDA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IMP] [GO:0016125 "sterol metabolic process"
evidence=IGI;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IDA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000006377
GO:GO:0005783 GO:GO:0005524 GO:GO:0042803 GO:GO:0016020
GO:GO:0015031 GO:GO:0005768 GO:GO:0051260 GO:GO:0016887
GO:GO:0010008 EMBL:BK006949 Pfam:PF04212 eggNOG:COG0464
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016125 EMBL:U25842
SMART:SM00745 GO:GO:0032511 GO:GO:0045053 PDB:2V6X PDBsum:2V6X
GO:GO:0070676 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL OrthoDB:EOG4V1B8K EMBL:X92680 PIR:S59831
RefSeq:NP_015499.1 PDB:2QP9 PDB:2QPA PDB:2RKO PDB:3EIE PDB:3EIH
PDB:3MHV PDBsum:2QP9 PDBsum:2QPA PDBsum:2RKO PDBsum:3EIE
PDBsum:3EIH PDBsum:3MHV ProteinModelPortal:P52917 SMR:P52917
DIP:DIP-1746N IntAct:P52917 MINT:MINT-389240 STRING:P52917
PaxDb:P52917 PeptideAtlas:P52917 EnsemblFungi:YPR173C GeneID:856303
KEGG:sce:YPR173C CYGD:YPR173c EvolutionaryTrace:P52917
NextBio:981664 Genevestigator:P52917 GermOnline:YPR173C
Uniprot:P52917
Length = 437
Score = 180 (68.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 48/154 (31%), Positives = 81/154 (52%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLF 319
K + P +L YGPPGTGK+ A+ +A ++ + ++ D+ +G ++ + QLF
Sbjct: 160 KGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMG-ESEKLVKQLF 218
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALAT 376
A+++K ++ FIDE DA R + SEA R LL + G+ S+ +++ AT
Sbjct: 219 AMARENKPSII-FIDEVDALTGTRGEGE-SEASRRIKTELLVQMNGVGNDSQGVLVLGAT 276
Query: 377 NRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKL 410
N P LDSA+ R + + PLP R + ++
Sbjct: 277 NIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEI 310
Score = 46 (21.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRR 502
LT + A TEG+SG +IA + V+ A+ + + F++V E + R
Sbjct: 319 LTKEDYRTLGAMTEGYSGSDIAVV---VKDALMQPIRKIQSATHFKDVS----TEDDETR 371
Query: 503 KLAAAGGGSN 512
KL G +
Sbjct: 372 KLTPCSPGDD 381
>DICTYBASE|DDB_G0284347 [details] [associations]
symbol:vps4 "MIT domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=IEA;ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0284347 GO:GO:0005524 GenomeReviews:CM000153_GR
GO:GO:0031902 GO:GO:0015031 GO:GO:0005768 GO:GO:0016197
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 EMBL:AAFI02000064 KO:K12196
OMA:AKCAEYL RefSeq:XP_638572.1 ProteinModelPortal:Q54PT2 SMR:Q54PT2
STRING:Q54PT2 EnsemblProtists:DDB0234037 GeneID:8624544
KEGG:ddi:DDB_G0284347 ProtClustDB:CLSZ2430261 Uniprot:Q54PT2
Length = 444
Score = 181 (68.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 46/151 (30%), Positives = 80/151 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P++ +L YGPPGTGK+ A+ +A + + ++ D+ LG + + QLF+ A++
Sbjct: 167 PWKGILLYGPPGTGKSYLAKAVATEISSTFFSISPSDIVTKWLG-DSEKLVKQLFEMARE 225
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALATNRPGD 381
K ++FIDE D+ LC SE+ R L + G+ S I++ ATN P
Sbjct: 226 -KNNSVIFIDEVDS-LCSSRNDQESESARRIKTEFLIQMNGVGNDSDGILVLAATNIPWG 283
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
LD A+ R ++ + LP + R K+ ++++
Sbjct: 284 LDLAIRRRFEKRIYIGLPEPQARAKMFQIHI 314
Score = 45 (20.9 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 425 GLVHRLFKSEQQKIEIKGLTDDILMEAAAK-----TEGFSGREIAKLM 467
GL +++ +I I G T + L++A K TEG+SG +I L+
Sbjct: 299 GLPEPQARAKMFQIHI-GSTPNTLVQADYKKLADLTEGYSGSDIGSLV 345
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 184 (69.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 250 PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVG-EGARMVRELFEMAR- 307
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 308 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 367
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 368 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 400
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 183 (69.5 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 183 (69.5 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKT+ AR +A ++ + + G ++ +G + + +LF+ A+
Sbjct: 208 PPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVG-EGARMVRELFEMAR- 265
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+K+ L+F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 266 TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + K++
Sbjct: 326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 165 (63.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 55/188 (29%), Positives = 95/188 (50%)
Query: 238 FGDVILHPSLQKRIRQLSGATANTKAHNA-----PFRNMLFYGPPGTGKTMAARELARKS 292
F DV +++ + ++ N + +N P + +L +G PGTGKT+ AR +A ++
Sbjct: 157 FADVAGIDEVKEELAEIVEFLKNPRKYNELGARIP-KGVLLFGQPGTGKTLLARAIAGEA 215
Query: 293 GLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMS- 349
G+ + ++G D + G A +++ LF+ AKK+ ++FIDE DA +R
Sbjct: 216 GVPFFSISGSDFVEMFVGVGA-SRVRDLFEQAKKNAP-CIVFIDEIDAVGRQRGAGLGGG 273
Query: 350 -EAQRSALNALLFRT-GDQSKD-IVLALATNRPGDLDSAVA--DRIDEVLEFPLPGQEER 404
+ + LN LL G S + I++ ATNRP LD A+ R D + P R
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 405 FKLLKLYL 412
++LK+++
Sbjct: 334 KEILKVHV 341
Score = 67 (28.6 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 432 KSEQQKIEIKG--LTDDILMEAAAK-TEGFSGREIAKLMASVQAAVYGSENCVLDPSLFR 488
+ E K+ +KG L DD+ ++ A+ T GF+G ++A ++ V++
Sbjct: 333 RKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEME 392
Query: 489 EVVDYKVAEHQQRRKL 504
E ++ +A +++ K+
Sbjct: 393 EAIERVIAGPEKKSKV 408
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 165 (63.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 55/188 (29%), Positives = 95/188 (50%)
Query: 238 FGDVILHPSLQKRIRQLSGATANTKAHNA-----PFRNMLFYGPPGTGKTMAARELARKS 292
F DV +++ + ++ N + +N P + +L +G PGTGKT+ AR +A ++
Sbjct: 157 FADVAGIDEVKEELAEIVEFLKNPRKYNELGARIP-KGVLLFGQPGTGKTLLARAIAGEA 215
Query: 293 GLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMS- 349
G+ + ++G D + G A +++ LF+ AKK+ ++FIDE DA +R
Sbjct: 216 GVPFFSISGSDFVEMFVGVGA-SRVRDLFEQAKKNAP-CIVFIDEIDAVGRQRGAGLGGG 273
Query: 350 -EAQRSALNALLFRT-GDQSKD-IVLALATNRPGDLDSAVA--DRIDEVLEFPLPGQEER 404
+ + LN LL G S + I++ ATNRP LD A+ R D + P R
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 405 FKLLKLYL 412
++LK+++
Sbjct: 334 KEILKVHV 341
Score = 67 (28.6 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 432 KSEQQKIEIKG--LTDDILMEAAAK-TEGFSGREIAKLMASVQAAVYGSENCVLDPSLFR 488
+ E K+ +KG L DD+ ++ A+ T GF+G ++A ++ V++
Sbjct: 333 RKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEME 392
Query: 489 EVVDYKVAEHQQRRKL 504
E ++ +A +++ K+
Sbjct: 393 EAIERVIAGPEKKSKV 408
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 187 (70.9 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 52/154 (33%), Positives = 86/154 (55%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKTM AR +A + G +++ G ++ + + ++ Q+F A
Sbjct: 377 PPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATL- 435
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG---DQSKDIVLAL-ATNRPG 380
+ ++FIDE DA LC + + +E ++ + +LL G + S+ VL L ATNRP
Sbjct: 436 RHPSIIFIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPH 494
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
LD+A+ R D+ +E +P ++R +L+ L
Sbjct: 495 ALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLL 528
Score = 142 (55.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 39/122 (31%), Positives = 64/122 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPG KTM A+ LA +SGL++ + G ++ +G ++ + ++F A+
Sbjct: 651 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG-ESERAVREIFRKARA 709
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSE--AQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F DE DA ER + + A R L G +Q K++ + ATNRP
Sbjct: 710 VAPSIIFF-DELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDR 768
Query: 382 LD 383
+D
Sbjct: 769 ID 770
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 182 (69.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 49/153 (32%), Positives = 81/153 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + +G A I ++F++A++
Sbjct: 172 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESA-RLIREMFNYARE 230
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G D + + +ATNRP
Sbjct: 231 HQP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPD 289
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +E PLP ++ R +LK++
Sbjct: 290 VLDPALLRPGRLDRKIEIPLPNEQSRMDILKIH 322
>SGD|S000003260 [details] [associations]
symbol:MSP1 "Mitochondrial protein involved in mitochondrial
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000003260 GO:GO:0016021 GO:GO:0005524 GO:GO:0006626
EMBL:BK006941 GO:GO:0005741 GO:GO:0016887 eggNOG:COG0464
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 KO:K00706
EMBL:X60722 EMBL:X68055 EMBL:Z72813 RefSeq:NP_011546.3
GeneID:852920 KEGG:sce:YGR032W EMBL:X81069 EMBL:AY557772 PIR:A49506
RefSeq:NP_011542.3 ProteinModelPortal:P28737 SMR:P28737
DIP:DIP-8029N IntAct:P28737 MINT:MINT-4486830 STRING:P28737
PaxDb:P28737 PeptideAtlas:P28737 EnsemblFungi:YGR028W GeneID:852915
KEGG:sce:YGR028W CYGD:YGR028w OMA:VINPLHI OrthoDB:EOG4BVW3J
NextBio:972614 Genevestigator:P28737 GermOnline:YGR028W
Uniprot:P28737
Length = 362
Score = 179 (68.1 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 51/158 (32%), Positives = 80/158 (50%)
Query: 259 ANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKI-HQ 317
+N+ AP +L YGPPG GKTM A+ LA++SG ++ + + KI
Sbjct: 118 SNSPLLQAP-SGVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDA 176
Query: 318 LFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGD---QSKDIVLAL 374
+F A K + ++FIDE D+FL ER+ T + L A D + +++
Sbjct: 177 MFSLANKLQP-CIIFIDEIDSFLRERSST--DHEVTATLKAEFMTLWDGLLNNGRVMIIG 233
Query: 375 ATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
ATNR D+D A R+ + LPG ++R+K+L + L
Sbjct: 234 ATNRINDIDDAFLRRLPKRFLVSLPGSDQRYKILSVLL 271
Score = 39 (18.8 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 452 AAKTEGFSGREIAKLM--ASVQAA 473
A T+GFSG ++ +L A++ AA
Sbjct: 287 ADNTKGFSGSDLKELCREAALDAA 310
Score = 38 (18.4 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 143 INTTFDHIGGGLRAILTD 160
IN TF IGG L +++D
Sbjct: 86 INITFQDIGG-LDPLISD 102
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 187 (70.9 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 52/153 (33%), Positives = 86/153 (56%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPGTGKTM R +A ++ + G V LG + +++ ++F+ A+
Sbjct: 312 PPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLG-ETESRLRKIFEDARA 370
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG--DQSKDIVLALATNRPGD 381
+ ++ FIDE DA +R + +SEA+ A+ LL G + K +V+A ATNRP
Sbjct: 371 HQPSII-FIDEIDALAPKRTED-VSEAESRAVATLLTLLDGMANAGKVVVIA-ATNRPNS 427
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYL 412
+D A+ R+++ +E +P + R ++KL L
Sbjct: 428 IDEALRRPGRLEKEIEIGIPDKSARLDIIKLLL 460
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/154 (29%), Positives = 86/154 (55%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPG KT+ A+ +A ++GL++ + G ++ +G ++ + Q+F A++
Sbjct: 581 PPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVG-ESERAVRQVFQKARQ 639
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSAL-NALLFRTGDQS-KDIVLALATNRPGDL 382
+ ++ F DE DA R + S+ +AL N L G ++ +++++ ATNRP +
Sbjct: 640 ASPSVIFF-DEIDALTANRGEDNSSDRVVAALLNEL---DGIEALRNVLVLAATNRPDMI 695
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
D A+ R+D +L P E R +++K+ +K
Sbjct: 696 DPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEK 729
>UNIPROTKB|A8QFF6 [details] [associations]
symbol:Bm1_53365 "Probable spastin homolog Bm1_53365"
species:6279 "Brugia malayi" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0034214 "protein hexamerization" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0051260
"protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0048471 GO:GO:0051260
GO:GO:0008568 GO:GO:0005874 GO:GO:0034214 KO:K13254 EMBL:DS239470
RefSeq:XP_001902141.1 ProteinModelPortal:A8QFF6 SMR:A8QFF6
GeneID:6105557 KEGG:bmy:Bm1_53365 CTD:6105557 InParanoid:A8QFF6
Uniprot:A8QFF6
Length = 454
Score = 183 (69.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 51/153 (33%), Positives = 79/153 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYAL-MTGGDVAPLGPQAVTKI-HQLFDWAKK 324
P + +L +GPPG GKT+ AR +A + G L ++ + KI LF A+
Sbjct: 210 PAQGILLFGPPGNGKTLLARAVAGECGSTMFLNVSAASLTSKWVGDAEKIVRALFQIARN 269
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGD-QSKD--IVLALATNRPGD 381
+ ++FIDE D+ LCERN+ ++R L+ G SKD +++ ATNRP +
Sbjct: 270 GQP-TIIFIDEIDSILCERNEKETEVSRRMKTEFLIQMDGMLSSKDDRLLVIGATNRPEE 328
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LDSA+ R + + +P R KL+ L+K
Sbjct: 329 LDSAILRRFPKRILIDVPNAAARLKLIMSLLEK 361
>TAIR|locus:2132922 [details] [associations]
symbol:AT4G28000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00546324 RefSeq:NP_194529.4
UniGene:At.54531 ProteinModelPortal:F4JKF8 SMR:F4JKF8 PRIDE:F4JKF8
EnsemblPlants:AT4G28000.1 GeneID:828913 KEGG:ath:AT4G28000
OMA:GAVMNEL ArrayExpress:F4JKF8 Uniprot:F4JKF8
Length = 830
Score = 194 (73.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 53/154 (34%), Positives = 77/154 (50%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L +GPPGTGKTM A+ +A ++G + ++ + G + LF A K
Sbjct: 551 PCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDE-KNVRALFTLAAK 609
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR-TGDQSK--DIVLALA-TNRPG 380
++F+DE D+ L +R + EA R N + G S D +L LA TNRP
Sbjct: 610 VSP-TIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPF 668
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
DLD A+ R + + LP E R K+L+ L K
Sbjct: 669 DLDEAIIRRFERRIMVGLPSVESREKILRTLLSK 702
Score = 39 (18.8 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 441 KGLTDDI-LMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQ 499
K T+++ E A T+G+SG ++ + A Y P RE++ + + Q
Sbjct: 702 KEKTENLDFQELAQMTDGYSGSDLKNFCTT---AAYR-------P--VRELIKQECLKDQ 749
Query: 500 QRRK 503
+RRK
Sbjct: 750 ERRK 753
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 53/168 (31%), Positives = 85/168 (50%)
Query: 261 TKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQL 318
T+ P + +L YGPPGTGKT+ A+ +A G ++ + +G A I ++
Sbjct: 199 TRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESA-RLIREM 257
Query: 319 FDWAKKSKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLAL 374
F +AK+ + ++F+DE DA R S E QR+ + L G D + +
Sbjct: 258 FAYAKEHEP-CIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIM 316
Query: 375 ATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAG 420
ATNRP LD A+ A R+D +E LP + R ++ K++ K +A+ G
Sbjct: 317 ATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSK-VAKQG 363
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 51/153 (33%), Positives = 80/153 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + +G A I ++F +AK+
Sbjct: 170 PPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESA-RLIREMFGYAKE 228
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G D + +ATNRP
Sbjct: 229 HEP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPD 287
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ A R+D +E PLP + R ++LK++
Sbjct: 288 TLDPALLRAGRLDRKIEIPLPNEVGRLEILKIH 320
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 181 (68.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 50/156 (32%), Positives = 80/156 (51%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
+P + L YGPPGTGKT+ AR +A + ++ + + +G A I ++F +A+
Sbjct: 174 SPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESA-RLIREMFAYAR 232
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRP 379
+ ++F+DE DA R S E QR+ + L G D + + +ATNRP
Sbjct: 233 -DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRP 291
Query: 380 GDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLD 413
LD A+ R+D LE PLP + R +LK++ +
Sbjct: 292 DTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAE 327
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 181 (68.8 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 49/153 (32%), Positives = 81/153 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + +G A I ++F +A+
Sbjct: 173 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESA-RLIREMFGYAR- 230
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G D+ + + +ATNRP
Sbjct: 231 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPD 290
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +E PLP ++ R ++LK++
Sbjct: 291 VLDPALLRPGRLDRKIEIPLPNEQARMEVLKIH 323
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 181 (68.8 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 51/155 (32%), Positives = 83/155 (53%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 180 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFIMAREHA 238
Query: 327 RGLLLFIDEADAFLCERNKTYM----SEAQRSALNALLFRTGDQS-KDIVLALATNRPGD 381
++ F+DE D+ R ++ SE QR+ L L G +S K+I + + TNR
Sbjct: 239 PSII-FMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDI 297
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFP PG R +LK++ K
Sbjct: 298 LDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRK 332
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 186 (70.5 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 52/156 (33%), Positives = 86/156 (55%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKTM AR +A + G +++ G ++ + + ++ Q+F A
Sbjct: 386 PPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATL- 444
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTG---DQSKDIVLAL-ATNRPG 380
+ ++FIDE DA LC + + +E ++ + +LL G + S+ VL L ATNRP
Sbjct: 445 RHPSIIFIDELDA-LCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPH 503
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD+A+ R D+ +E +P +R +L+ L +
Sbjct: 504 ALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQR 539
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 50/151 (33%), Positives = 79/151 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPG KTM A+ LA +SGL++ + G ++ +G ++ + ++F A+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG-ESERAVREIFRKARA 718
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSE--AQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F DE DA ER + + A R L G +Q KD+ + ATNRP
Sbjct: 719 VSPSIIFF-DELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDR 777
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKL 410
+D A+ RID ++ PLP R ++L L
Sbjct: 778 IDKALMRPGRIDRIIYVPLPDAATRREILNL 808
>UNIPROTKB|G4N2E6 [details] [associations]
symbol:MGG_07916 "Vacuolar protein sorting-associated
protein 4" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:CM001233 Pfam:PF04212
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 KO:K12196
RefSeq:XP_003713158.1 ProteinModelPortal:G4N2E6 SMR:G4N2E6
EnsemblFungi:MGG_07916T0 GeneID:2683843 KEGG:mgr:MGG_07916
Uniprot:G4N2E6
Length = 427
Score = 178 (67.7 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 51/149 (34%), Positives = 77/149 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P++ +L YGPPGTGK+ A+ +A ++ + ++ D+ +G ++ + QLF A++
Sbjct: 157 PWKGILLYGPPGTGKSFLAKAVATEAKSTFFSVSSSDLVSKWMG-ESERLVKQLFAMARE 215
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDI--VLAL-ATNRPGD 381
+K ++ FIDE DA LC SEA R +L + KD VL L ATN P
Sbjct: 216 NKPSII-FIDEVDA-LCGARGEGESEASRRIKTEMLVQMDGVGKDSEGVLVLGATNIPWQ 273
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKL 410
LDSA+ R + LP R + KL
Sbjct: 274 LDSAIRRRFQRRVHISLPDVAARTTMFKL 302
Score = 45 (20.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKLM 467
LT++ E A EG+SG +I+ ++
Sbjct: 311 LTNEDYRELAKMAEGYSGSDISNVV 335
>SGD|S000005995 [details] [associations]
symbol:YTA6 "Putative ATPase of the CDC48/PAS1/SEC18 (AAA)
family" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000005995
GO:GO:0005524 GO:GO:0005938 GO:GO:0016887 EMBL:BK006949
eggNOG:COG0464 EMBL:U41849 GeneTree:ENSGT00570000078874 EMBL:M14145
EMBL:X81071 PIR:S61113 RefSeq:NP_015251.1 ProteinModelPortal:P40328
SMR:P40328 DIP:DIP-4025N IntAct:P40328 MINT:MINT-546593
STRING:P40328 PaxDb:P40328 PRIDE:P40328 EnsemblFungi:YPL074W
GeneID:856031 KEGG:sce:YPL074W CYGD:YPL074w HOGENOM:HOG000066024
OMA:QDIRIAR OrthoDB:EOG4SN4XK NextBio:980956 Genevestigator:P40328
GermOnline:YPL074W Uniprot:P40328
Length = 754
Score = 166 (63.5 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLF 319
K P R ML +GPPGTGKTM A+ +A +S + ++ + LG ++ + LF
Sbjct: 498 KGLREPVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLG-ESEKLVRALF 556
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQR---------SALNALLFRTGDQSKDI 370
AKK ++ FIDE D+ L R+ ++R S+L++ ++ D++ +
Sbjct: 557 YMAKKLSPSII-FIDEIDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTL 615
Query: 371 ---VLAL-ATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
VL L ATN P +D A R L PLP E R LK + K
Sbjct: 616 DSRVLVLGATNLPWAIDDAARRRFSRKLYIPLPDYETRLYHLKRLMAK 663
Score = 66 (28.3 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 17/70 (24%), Positives = 40/70 (57%)
Query: 47 LQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTE-REKAEIER-ETIRV 104
LQ E + R ++L++++ + + E A++ EE+++ ++ + + RE+AE +R T++
Sbjct: 186 LQYERDLELQR-EKLIELKVKEKVEFEVAQKLEEERVKREEEERKHREQAEKKRISTLKH 244
Query: 105 RAMAEAEGRA 114
+ RA
Sbjct: 245 ERKTNYKSRA 254
Score = 63 (27.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 44 WHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERET-I 102
W + ++ A +E K+ +++ + +AR+ EE+ K Q ER+ E++RE I
Sbjct: 144 WRMGSKRDKLKEADEKE-AKINKQAD-NIRRARKLEEEKKLGAKLQYERD-LELQREKLI 200
Query: 103 RVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAER-EK 138
++ + E + KL E+ +R +R + E+ EK
Sbjct: 201 ELKVKEKVEFEVAQ-KLEEERVKREEEERKHREQAEK 236
Score = 48 (22.0 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 48 QAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIE 98
+ E E + +E VK +EE EQA + ++ +++ + +A ++
Sbjct: 207 KVEFEVAQKLEEERVKREEEERKHREQAEKKRISTLKHERKTNYKSRASLD 257
>WB|WBGene00010557 [details] [associations]
symbol:mspn-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0040007 GO:GO:0002119
GO:GO:0005741 GO:GO:0010171 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 EMBL:Z69664
PIR:T23311 RefSeq:NP_501860.1 RefSeq:NP_501861.1 UniGene:Cel.22858
ProteinModelPortal:P54815 SMR:P54815 IntAct:P54815
MINT:MINT-1100399 STRING:P54815 PaxDb:P54815 PRIDE:P54815
EnsemblMetazoa:K04D7.2a.1 EnsemblMetazoa:K04D7.2a.2 GeneID:177896
KEGG:cel:CELE_K04D7.2 UCSC:K04D7.2a CTD:177896 WormBase:K04D7.2a
WormBase:K04D7.2b InParanoid:P54815 OMA:GDQIIVM NextBio:898840
Uniprot:P54815
Length = 342
Score = 178 (67.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 50/153 (32%), Positives = 83/153 (54%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQ-LFDWAKK 324
+P R +L YGPPG GKT+ A+ +AR +G + + ++ K+ +F A+K
Sbjct: 115 SPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQK 174
Query: 325 SKRGLLLFIDEADAFLCERNK-----TYMSEAQRSALNALLFRTGDQSKDIVLALATNRP 379
+ ++FIDE D+FL +R T M +AQ L +GDQ I++ ATNRP
Sbjct: 175 FQP-TIIFIDEIDSFLRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQ---IIVMGATNRP 230
Query: 380 GDLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
D+D+A+ R+ + P+P ++R ++L + L
Sbjct: 231 RDVDAAILRRMTARFQVPVPNAKQRSQILNVIL 263
>UNIPROTKB|F1S3Z2 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051013
"microtubule severing" evidence=IEA] [GO:0048487 "beta-tubulin
binding" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0007109 "cytokinesis, completion of separation"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 OMA:HKSTPKT EMBL:FP583344
EMBL:CU694619 Ensembl:ENSSSCT00000009321 Uniprot:F1S3Z2
Length = 479
Score = 182 (69.1 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 287 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 345
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ L ER + ++R L+ G QS D VL + ATNRP
Sbjct: 346 ELQPSII-FIDEVDSLLRERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 404
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 405 ELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCK 438
Score = 42 (19.8 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 443 LTQKELAQLARLTDGYSGSDLTAL 466
>ZFIN|ZDB-GENE-030616-593 [details] [associations]
symbol:atad1a "ATPase family, AAA domain containing
1a" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-030616-593 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777
GO:GO:0030054 GO:GO:0045211 GO:GO:0006200 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000225141 HOVERGEN:HBG057074
GeneTree:ENSGT00550000074823 EMBL:AL772163 EMBL:BC081379
IPI:IPI00499109 IPI:IPI00508202 RefSeq:NP_001004640.1
UniGene:Dr.104656 ProteinModelPortal:Q7ZZ25 STRING:Q7ZZ25
Ensembl:ENSDART00000035859 GeneID:368672 KEGG:dre:368672 CTD:368672
InParanoid:Q7ZZ25 OrthoDB:EOG4VHK6P NextBio:20813106 Bgee:Q7ZZ25
Uniprot:Q7ZZ25
Length = 380
Score = 168 (64.2 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 58/179 (32%), Positives = 91/179 (50%)
Query: 240 DVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALM 299
D ++ P QKR SG+ K P + +L YGPPG GKT+ A+ A+ SG + +
Sbjct: 108 DTVILP-FQKR-HLFSGS----KLLQPP-KGVLLYGPPGCGKTLIAKATAKASGCRFINL 160
Query: 300 TGGDVAPLGPQAVTKIHQ-LFDWAKKSKRGLLLFIDEADAFLCERNK-----TYMSEAQR 353
+ K+ +F A K + ++F+DE D+FL R+ T M +AQ
Sbjct: 161 QASTLTDKWYGESQKLTAAVFSLAVKIQP-CIIFLDEIDSFLRNRSSMDHEATAMMKAQF 219
Query: 354 SALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
+L L TG+ S+ +V+ ATNRP D+D+A+ R+ LP +R ++L+L L
Sbjct: 220 MSLWDGL-DTGENSQVMVMG-ATNRPQDVDAAILRRMPTAFHVGLPNAAQREEILRLIL 276
Score = 53 (23.7 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 19/79 (24%), Positives = 42/79 (53%)
Query: 425 GLVHRLFKSEQQKIEIKG--LTDDI-LMEAAAKTEGFSGREIAKLMASVQAAVYGSENCV 481
GL + + E ++ + G L++ I L E A+++EG+SG ++ +L AA+Y + V
Sbjct: 261 GLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRD--AAMYRVRDYV 318
Query: 482 LDPSLFREVVDYKVAEHQQ 500
+ + +++ E ++
Sbjct: 319 RKQQMKQIAQQFQLDEEEE 337
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 180 (68.4 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 50/153 (32%), Positives = 79/153 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + LF A+
Sbjct: 203 PPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVG-EGARMVRDLFQMAR- 260
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
SK+ ++F DE DA R +E QR+ L + G D +I + +ATNRP
Sbjct: 261 SKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 320
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R + ++
Sbjct: 321 TLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIH 353
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 160 (61.4 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 48/150 (32%), Positives = 79/150 (52%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSK 326
+ +L GPPGTGKT+ A+ +A ++G+ + ++G + + G A +++ LFD AKK+
Sbjct: 193 KGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA-SRVRDLFDQAKKNA 251
Query: 327 RGLLLFIDEADAFLCERNKTYMS--EAQRSALNALLFRTG--DQSKDIVLALATNRPGDL 382
++FIDE DA +R + + LN +L D +++ ATNRP L
Sbjct: 252 P-CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDIL 310
Query: 383 DSAVA--DRIDE--VLEFP-LPGQEERFKL 407
D A+ R D VL+ P + G+E K+
Sbjct: 311 DPALLRPGRFDRRVVLDKPDITGREAILKI 340
Score = 69 (29.3 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 437 KIEIKG--LTDDILMEAAAK-TEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDY 493
KI KG L D + +E AK T GFSG ++A L+ V++ E +D
Sbjct: 339 KIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLEESIDR 398
Query: 494 KVA--EHQQRR 502
+A E + RR
Sbjct: 399 VIAGPERKSRR 409
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 174 (66.3 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 50/154 (32%), Positives = 81/154 (52%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-AP-LGPQAVTKIHQLFDWAK 323
+P + ++ YGPPG KT + +A S L + ++G + +P LG T I +F A+
Sbjct: 602 SPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSEQT-IRDIFKKAR 660
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSE---AQRSALNALLFRTG--DQSKDIVLALATNR 378
++ +L F DE DA + +RN + S AQ L+ L +Q +++ ATNR
Sbjct: 661 QTTPSILFF-DEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNR 719
Query: 379 PGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKL 410
+D+A+ R D++LE LP Q R K+LK+
Sbjct: 720 LDMIDNALLRPGRFDKILEIKLPDQLSRLKILKI 753
Score = 174 (66.3 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 46/157 (29%), Positives = 78/157 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELA-----RKSGLDYALMTGGDVAPLGPQAVTKIHQLFDW 321
P + +L GPPGTGKT R + +D A ++G + + D
Sbjct: 320 PPKGILLKGPPGTGKTHLVRTVCDAYDIEMISIDCAKISGSYIGETEENLRNIFQEASDK 379
Query: 322 A-KKSKRGLLLFIDEADAFLCERNKTYMSEAQR-SALNALLFRTGDQSKDIVLALATNRP 379
+ KS +++FIDE D R+K+ +E++ LL G + ++++ ATNRP
Sbjct: 380 SIAKSNSPIVVFIDEIDTICPPRSKSTQNESRVVGQFLTLLDGIGARKGNLIIIAATNRP 439
Query: 380 GDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D+A+ R+D +E P+P +++R +LKLY K
Sbjct: 440 NQIDNALRRPGRLDREIEIPVPNKQQRLDILKLYCSK 476
Score = 50 (22.7 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 14/77 (18%), Positives = 35/77 (45%)
Query: 44 WHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERET-I 102
W + Y+ N +L+ Q+ + EQ + +EQ Q ++ Q +++ I+ + +
Sbjct: 99 WTSRYIQQNYYIQSNSKLILNQQINDEEQEQEQE--QEQEQQEQEQNKKQNKSIKYPSFV 156
Query: 103 RVRAMAEAEGRAHEAKL 119
++ + E E + +
Sbjct: 157 KIYKVNEFENNLNNVDI 173
Score = 49 (22.3 bits), Expect = 8.9e-11, Sum P(3) = 8.9e-11
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 437 KIEIKG--LTDDI-LMEAAAKTEGFSGREIAKLM--ASVQA 472
KI+ K L+D++ L+E + T GFSG ++ L AS Q+
Sbjct: 752 KIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQS 792
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 184 (69.8 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 51/152 (33%), Positives = 81/152 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFDWAKKS 325
P R +L +GPPG GKTM A LA + G+ + ++ V+ + ++ K+ ++F+ AK S
Sbjct: 207 PPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAK-S 265
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQR------SALNALLFRTGDQSKDIVLALATNRP 379
L+FIDE DA +R +R + ++ L F D K +++ ATNRP
Sbjct: 266 LAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTD-GKPVLVIGATNRP 324
Query: 380 GDLDSAV--ADRIDEVLEFPLPGQEERFKLLK 409
LDSA+ A R D + +P Q+ R K+L+
Sbjct: 325 DSLDSALRRAGRFDREICLTVPSQDAREKILR 356
Score = 166 (63.5 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 51/152 (33%), Positives = 84/152 (55%)
Query: 265 NAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWA 322
+AP +L +GPPG GKT+ A+ +A +S ++ + G ++ +G ++ + Q+F A
Sbjct: 524 SAP-TGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVG-ESERAVRQVFLRA 581
Query: 323 KKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRT---GDQSKDIVLALATNRP 379
+ S ++F DE DA + R+ + +SEA +N LL D+S V+A ATNRP
Sbjct: 582 RASSP-CVIFFDELDAMVPRRDDS-LSEASSRVVNTLLTELDGLSDRSGVYVIA-ATNRP 638
Query: 380 GDLDSAVA--DRIDEVLEFPLPGQEERFKLLK 409
+D A+ R+D+ L LP ER ++LK
Sbjct: 639 DIIDPAMLRPGRLDKTLLVDLPDAHERVEILK 670
>FB|FBgn0040208 [details] [associations]
symbol:Kat60 "Katanin 60" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;IDA;IMP;NAS]
[GO:0007017 "microtubule-based process" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA;IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0070462 "plus-end specific microtubule depolymerization"
evidence=IMP] [GO:0000091 "mitotic anaphase A" evidence=IMP]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IGI] [GO:0035220 "wing disc development"
evidence=IGI] [GO:0031122 "cytoplasmic microtubule organization"
evidence=IMP] [GO:0007019 "microtubule depolymerization"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IMP] [GO:0031252
"cell leading edge" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005938 GO:GO:0005813
GO:GO:0005694 GO:GO:0031252 GO:GO:0030336 GO:GO:0022416
GO:GO:0035220 GO:GO:0000070 HSSP:Q01853 eggNOG:COG0464
GO:GO:0008017 GO:GO:0008568 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0031122 GO:GO:0000091 GO:GO:0070462
GO:GO:0008352 EMBL:AY071142 ProteinModelPortal:Q8SZ40 SMR:Q8SZ40
STRING:Q8SZ40 PaxDb:Q8SZ40 PRIDE:Q8SZ40 FlyBase:FBgn0040208
InParanoid:Q8SZ40 OrthoDB:EOG4573NX ChiTaRS:katanin-60
ArrayExpress:Q8SZ40 Bgee:Q8SZ40 Uniprot:Q8SZ40
Length = 572
Score = 182 (69.1 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 49/158 (31%), Positives = 80/158 (50%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFD 320
K P++ +L GPPGTGKTM A+ +A + G + ++ + + ++ + LF+
Sbjct: 320 KGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLLFE 379
Query: 321 WAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRT-----GDQSKDIVLALA 375
A+ + FIDE D+ R EA R + LL + G++ +V+ LA
Sbjct: 380 MARFYAPSTI-FIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLA 438
Query: 376 -TNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
TN P D+D A+ R+++ + PLP E R LLK+ L
Sbjct: 439 ATNFPWDIDEALRRRLEKRIYIPLPSDEGREALLKINL 476
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 176 (67.0 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 65/216 (30%), Positives = 103/216 (47%)
Query: 214 GLFSRTLKSLRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHN---APF-R 269
G+F+ ++ DK SKN F DV ++ I + N K + A +
Sbjct: 299 GIFNIGKATITRADKH--SKNKIYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPK 356
Query: 270 NMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL----GPQAVTKIHQLFDWAKKS 325
L GPPGTGKT+ A+ A +SG+ + ++G D + GP +++ LF A+++
Sbjct: 357 GALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGP---SRVRHLFQEARQA 413
Query: 326 KRGLLLFIDEADAFLCERNKTYM--SEAQRSALNALLFRT---GDQSKDIVLALATNRPG 380
++ FIDE DA R + + ++ + S LN LL G + +VLA TNRP
Sbjct: 414 APSII-FIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLA-GTNRPD 471
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R D + P + R ++ K+YL K
Sbjct: 472 ILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKK 507
Score = 55 (24.4 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 18/84 (21%), Positives = 35/84 (41%)
Query: 423 KPGLVHR--LFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENC 480
KP + R +FK +KI++ AA T GF+G +IA + E
Sbjct: 491 KPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGA 550
Query: 481 VLDPSLFREVVDYKVAEHQQRRKL 504
+ + F +D + +++ ++
Sbjct: 551 TVTMAHFESAIDRVIGGLEKKNRV 574
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 178 (67.7 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 145 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 203
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 204 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 262
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 263 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 298
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 52/156 (33%), Positives = 82/156 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ AR A ++ + + G + + G A + F AK+
Sbjct: 236 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKL-VRDAFALAKE 294
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQ-SKDIVLALATNRPG 380
K ++FIDE DA +R K E QR+ L L G Q + + + ATNR
Sbjct: 295 -KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVD 353
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ + R+D +EFP+P +E R ++++++ K
Sbjct: 354 ILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 389
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 176 (67.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 51/152 (33%), Positives = 83/152 (54%)
Query: 271 MLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSKRG 328
+L GPPGTGKT+ A+ +A ++ + + ++G D + G A +++ +FD AKK +
Sbjct: 192 VLLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGA-SRVRDMFDQAKK-QAP 249
Query: 329 LLLFIDEADAFLCERNKTYMS--EAQRSALNALLFRT-GDQSKD-IVLALATNRPGDLDS 384
++FIDE DA R + + LN LL G + K+ I++ ATNRP LD
Sbjct: 250 CIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDP 309
Query: 385 AVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
A+ R D + PLP + R +LK++++K
Sbjct: 310 ALLRPGRFDRQVVVPLPDIKGREYILKVHMNK 341
Score = 52 (23.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 443 LTDDILMEAAAK-TEGFSGREIAKLMASVQAAVYGSENCVLDPSL--FREVVDYKVAEHQ 499
L D+ A+ T GFSG ++A ++ +AA++ + D S+ F D K+
Sbjct: 344 LAKDVKASVIARGTPGFSGADLANIVN--EAALFAARENKKDVSMSEFERAKD-KIMMGA 400
Query: 500 QRRKL 504
+RR +
Sbjct: 401 ERRSM 405
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 171 (65.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 48/156 (30%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YG PGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 221 PPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLG-DGPKMVRELFRVAEE 279
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
+ ++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 280 NAPSIV-FIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIE 338
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 339 SLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSR 374
Score = 51 (23.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/118 (20%), Positives = 56/118 (47%)
Query: 47 LQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIE--RET-IR 103
L A + R R + L + + + +EQ +E+++ Q+ + E E+A+++ R T +
Sbjct: 52 LPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA 111
Query: 104 VRAMAEAEGRAHEAKLAEDVNRRMLVDRAN-AEREKWIAAINTTFDHIGGGLRAILTD 160
V ++ E H A ++ +V V+ + ++E+ + +H + +L+D
Sbjct: 112 VGSLEEIIDDQH-AIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSD 168
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/152 (32%), Positives = 84/152 (55%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 180 KGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 238
Query: 327 RGLLLFIDEADAFLCERNKTYM----SEAQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
++ F+DE D+ R+ + SE QR+ L L G + +K+I + +ATNR
Sbjct: 239 PSII-FMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI 297
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ RID +EFP P E R ++L+++
Sbjct: 298 LDPALLRPGRIDRKIEFPPPSAEARAEILRIH 329
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 173 (66.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 100/403 (24%), Positives = 179/403 (44%)
Query: 40 YKFDWHLLQAENEYHRA----RNQELVKMQEESSIR-LEQARRATEEQIQAQKRQTEREK 94
Y W ++ + E RA R +E K Q + I +++ R E+ ++AQK+Q ER+K
Sbjct: 211 YMLTW--VKPKKESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKTMKAQKKQQERKK 268
Query: 95 AEIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDR-ANAEREKWIA-AINTTFDHIGG 152
R+ +R + E+ EA+ N R + D A ++ +A A+ F +I
Sbjct: 269 ----RKAVRKKKYEES---LREARK----NYRDMADMWARLAQDPNVATALGLVFFYIF- 316
Query: 153 GLRAILTDQNKXXXXXXXXXXXXXXIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPW 212
R ++ + K R+ + + ++ I + + E + K P+
Sbjct: 317 -YRVVVLNYRKQKKDYEDRLKIEKAEADERKKMRELEREMEGIEEEDEEVEEGTGEKNPY 375
Query: 213 SGLFSRTLKS----LRGGDKELASKNGNG----FGDVI----LHPSLQKRIRQLS-GATA 259
+ + +KS R +K L G F DV + L++ ++ + G
Sbjct: 376 LQMAMQFMKSGARVRRASNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMY 435
Query: 260 NTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQ 317
+ P +L GPPG GKT+ A+ +A ++G+++ ++ + G A +++
Sbjct: 436 RRRGVKIP-GGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGA-SRVRA 493
Query: 318 LFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQ-RSA-LNALLFRT-GDQSKDIVLAL 374
L+ A+++ ++ FIDE DA ER S Q R A LN LL G + + V+ +
Sbjct: 494 LYQEARENAPSVV-FIDELDAVGRERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITI 552
Query: 375 A-TNRPGDLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
A TNRP LD A+ R D + P PG R ++L+++ K
Sbjct: 553 ASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVHARK 595
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 423 KPGLVHRLFKSEQQKIEIKGLTDDI-LMEAAAKTEGFSGREIAKLM 467
KPGL+ R+ + Q K + +D+ M A+ T+G G E+A ++
Sbjct: 579 KPGLIGRM-EILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIV 623
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 444 TDDILMEAAAKTEGFSGREIAKLMASVQAAV 474
TDD+L A + G R+ L Q A+
Sbjct: 640 TDDLLQAAQIEERGMLDRKDRSLETWRQVAI 670
>WB|WBGene00016045 [details] [associations]
symbol:spas-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0007019 "microtubule depolymerization" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0005856 "cytoskeleton" evidence=IDA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IDA;IMP]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051013 "microtubule severing" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0048471 GO:GO:0051260 GO:GO:0048477 eggNOG:COG0464
GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0040025 GO:GO:0007019 GO:GO:0034214
GeneTree:ENSGT00570000078874 GO:GO:0031117 EMBL:FO080128
RefSeq:NP_001256115.1 RefSeq:NP_741586.1 RefSeq:NP_741587.1
UniGene:Cel.22726 ProteinModelPortal:Q8MNV0 SMR:Q8MNV0
DIP:DIP-59833N STRING:Q8MNV0 PaxDb:Q8MNV0 PRIDE:Q8MNV0
EnsemblMetazoa:C24B5.2c GeneID:179300 KEGG:cel:CELE_C24B5.2
UCSC:C24B5.2a CTD:179300 WormBase:C24B5.2a WormBase:C24B5.2b
InParanoid:Q8MNV0 OMA:ILCERSE NextBio:904790 ArrayExpress:Q8MNV0
Uniprot:Q8MNV0
Length = 512
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 51/159 (32%), Positives = 83/159 (52%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLF 319
K P + +L +GPPG GKT+ A+ +A +S + ++ + +G T I LF
Sbjct: 266 KGLRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKT-IRGLF 324
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-AT 376
A+ ++ ++ FIDE D+ LCER++ ++R L+ G S D +L + AT
Sbjct: 325 QIARNAQPSII-FIDEIDSILCERSEKDAEVSRRMKTEFLVQFDGATSSADDRILVIGAT 383
Query: 377 NRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKY 415
NRP +LD AV R + + LP +E R +L+ L K+
Sbjct: 384 NRPHELDDAVLRRFPKRIMLNLPDEEARKELITKTLKKH 422
>UNIPROTKB|G5EEF8 [details] [associations]
symbol:spas-1 "Spastin" species:6239 "Caenorhabditis
elegans" [GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0048471 GO:GO:0051260 GO:GO:0048477 GO:GO:0008017
GO:GO:0008568 GO:GO:0051013 GO:GO:0040025 GO:GO:0007019
EMBL:FO080128 RefSeq:NP_001256115.1 UniGene:Cel.22726
EnsemblMetazoa:C24B5.2c GeneID:179300 KEGG:cel:CELE_C24B5.2
CTD:179300 OMA:ILCERSE EMBL:AB287436 ProteinModelPortal:G5EEF8
SMR:G5EEF8 PRIDE:G5EEF8 WormBase:C24B5.2c Uniprot:G5EEF8
Length = 512
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 51/159 (32%), Positives = 83/159 (52%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLF 319
K P + +L +GPPG GKT+ A+ +A +S + ++ + +G T I LF
Sbjct: 266 KGLRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKT-IRGLF 324
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-AT 376
A+ ++ ++ FIDE D+ LCER++ ++R L+ G S D +L + AT
Sbjct: 325 QIARNAQPSII-FIDEIDSILCERSEKDAEVSRRMKTEFLVQFDGATSSADDRILVIGAT 383
Query: 377 NRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKY 415
NRP +LD AV R + + LP +E R +L+ L K+
Sbjct: 384 NRPHELDDAVLRRFPKRIMLNLPDEEARKELITKTLKKH 422
>UNIPROTKB|Q8MNV0 [details] [associations]
symbol:spas-1 "Probable spastin homolog spas-1"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=IDA;NAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0001578
"microtubule bundle formation" evidence=NAS] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IDA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=NAS] [GO:0051013 "microtubule
severing" evidence=IDA] [GO:0034214 "protein hexamerization"
evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0048471 GO:GO:0051260 GO:GO:0048477 eggNOG:COG0464
GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0040025 GO:GO:0007019 GO:GO:0034214
GeneTree:ENSGT00570000078874 GO:GO:0031117 EMBL:FO080128
RefSeq:NP_001256115.1 RefSeq:NP_741586.1 RefSeq:NP_741587.1
UniGene:Cel.22726 ProteinModelPortal:Q8MNV0 SMR:Q8MNV0
DIP:DIP-59833N STRING:Q8MNV0 PaxDb:Q8MNV0 PRIDE:Q8MNV0
EnsemblMetazoa:C24B5.2c GeneID:179300 KEGG:cel:CELE_C24B5.2
UCSC:C24B5.2a CTD:179300 WormBase:C24B5.2a WormBase:C24B5.2b
InParanoid:Q8MNV0 OMA:ILCERSE NextBio:904790 ArrayExpress:Q8MNV0
Uniprot:Q8MNV0
Length = 512
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 51/159 (32%), Positives = 83/159 (52%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLF 319
K P + +L +GPPG GKT+ A+ +A +S + ++ + +G T I LF
Sbjct: 266 KGLRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKT-IRGLF 324
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-AT 376
A+ ++ ++ FIDE D+ LCER++ ++R L+ G S D +L + AT
Sbjct: 325 QIARNAQPSII-FIDEIDSILCERSEKDAEVSRRMKTEFLVQFDGATSSADDRILVIGAT 383
Query: 377 NRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKY 415
NRP +LD AV R + + LP +E R +L+ L K+
Sbjct: 384 NRPHELDDAVLRRFPKRIMLNLPDEEARKELITKTLKKH 422
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 193 PPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 251
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 252 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRAD 310
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 311 TLDPALLRPGRLDRKIEFPLPDRRQK 336
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/153 (32%), Positives = 84/153 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 214 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 272
Query: 327 RGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS-KDIVLALATNRPGDLD 383
++ F+DE D+ +R + SE QR+ + L G +S ++I + + TNR LD
Sbjct: 273 PSII-FMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILD 331
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
A+ RID +EFP P E R ++LK++ K
Sbjct: 332 EALLRPGRIDRKIEFPNPNVEARMEILKIHSRK 364
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/153 (32%), Positives = 84/153 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 214 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 272
Query: 327 RGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS-KDIVLALATNRPGDLD 383
++ F+DE D+ +R + SE QR+ + L G +S ++I + + TNR LD
Sbjct: 273 PSII-FMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILD 331
Query: 384 SAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
A+ RID +EFP P E R ++LK++ K
Sbjct: 332 EALLRPGRIDRKIEFPNPNVEARMEILKIHSRK 364
>UNIPROTKB|G3X8E2 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 OMA:VRWNDVA EMBL:DAAA02046699
Ensembl:ENSBTAT00000065503 Uniprot:G3X8E2
Length = 437
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF+ A+
Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELAR 217
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ RN+ A+R L+ G + D L L ATN P
Sbjct: 218 QHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWV 276
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ--QKIE 439
LDSA+ R ++ + PLP + R ++ +L+L + + +H L + + +
Sbjct: 277 LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLG---STPHNLTEANIHELARKTEGYSGAD 333
Query: 440 IKGLTDDILMEAAAKTE 456
I + D LM+ K +
Sbjct: 334 ISVIVRDSLMQPVRKVQ 350
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 48/156 (30%), Positives = 81/156 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P +L YGPPGTGKTM + +A ++ + + + G + LG + + +F A++
Sbjct: 171 PPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLG-EGPRMVRDVFRLARE 229
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G D+S ++ + +ATNR
Sbjct: 230 NSPSII-FIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRAD 288
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R+D +EFPLP ++++ + + + K
Sbjct: 289 TLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISK 324
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 48/156 (30%), Positives = 81/156 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P +L YGPPGTGKTM + +A ++ + + + G + LG + + +F A++
Sbjct: 171 PPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLG-EGPRMVRDVFRLARE 229
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G D+S ++ + +ATNR
Sbjct: 230 NSPSII-FIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRAD 288
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R+D +EFPLP ++++ + + + K
Sbjct: 289 TLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISK 324
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 216 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 274
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 275 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 333
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 334 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 369
>TAIR|locus:2133298 [details] [associations]
symbol:AT4G02480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006487
"protein N-linked glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] InterPro:IPR000253 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR008984
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0017111
EMBL:AK229937 IPI:IPI00540740 RefSeq:NP_567238.2 UniGene:At.27891
UniGene:At.54098 ProteinModelPortal:Q0WM93 SMR:Q0WM93 STRING:Q0WM93
PRIDE:Q0WM93 EnsemblPlants:AT4G02480.1 GeneID:827979
KEGG:ath:AT4G02480 TAIR:At4g02480 HOGENOM:HOG000225144
InParanoid:Q0WM93 OMA:STRRQAF PhylomeDB:Q0WM93
ProtClustDB:CLSN2690660 Genevestigator:Q0WM93 Uniprot:Q0WM93
Length = 1265
Score = 192 (72.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 53/155 (34%), Positives = 79/155 (50%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L +GPPGTGKTM A+ +A ++G ++ ++ + G + + +F A K
Sbjct: 997 PTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFG-EGEKYVKAVFSLASK 1055
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-----FRTGDQSKDIVLALATNRP 379
++ F+DE D+ L R EA R N + RT D+ + +VLA ATNRP
Sbjct: 1056 IAPSVI-FVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLA-ATNRP 1113
Query: 380 GDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
DLD AV R+ L LP R K+L + L K
Sbjct: 1114 FDLDEAVIRRLPRRLMVNLPDATNRSKILSVILAK 1148
Score = 41 (19.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 219 TLKSLRGGDKELASKNG 235
T LRGGD+ + S NG
Sbjct: 221 TCVHLRGGDEVIFSLNG 237
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 217 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 275
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 276 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 334
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 335 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 370
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 277 HAPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371
>FB|FBgn0037375 [details] [associations]
symbol:kat-60L1 "katanin p60-like 1" species:7227 "Drosophila
melanogaster" [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] [GO:0008352 "katanin complex"
evidence=ISS] [GO:0005875 "microtubule associated complex"
evidence=ISS] [GO:0007017 "microtubule-based process" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0005874 "microtubule" evidence=IDA] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0016322 GO:GO:0016887
GO:GO:0050775 eggNOG:COG0464 GO:GO:0008017 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005874
GeneTree:ENSGT00550000074466 GO:GO:0008352 UniGene:Dm.8004
GeneID:40715 KEGG:dme:Dmel_CG1193 CTD:40715 FlyBase:FBgn0037375
ChiTaRS:kat-60L1 GenomeRNAi:40715 NextBio:820217 EMBL:BT023721
RefSeq:NP_001163523.1 RefSeq:NP_001163525.1 SMR:Q4QPP5
STRING:Q4QPP5 EnsemblMetazoa:FBtr0300738 EnsemblMetazoa:FBtr0300740
HOGENOM:HOG000034934 OMA:IQMDGLN Uniprot:Q4QPP5
Length = 673
Score = 181 (68.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 53/173 (30%), Positives = 83/173 (47%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFD 320
K P+R +L GPPGTGKTM A+ +A + G + ++ + + ++ + LF+
Sbjct: 421 KGIRRPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFE 480
Query: 321 WAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGD-----QSKDIVLALA 375
A+ + FIDE DA R EA R LL + Q + +++ LA
Sbjct: 481 MARFYAPSTI-FIDEIDALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLA 539
Query: 376 -TNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLV 427
TN P D+D A R ++ + PLP + R LLKL L K + + S G++
Sbjct: 540 ATNHPWDIDEAFRRRFEKRIYIPLPNEGTRSALLKLCL-KDVCLSPSLNTGII 591
>ZFIN|ZDB-GENE-040426-1235 [details] [associations]
symbol:vps4b "vacuolar protein sorting 4b (yeast)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-1235 GO:GO:0005524 Pfam:PF04212 HSSP:Q01853
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 HOVERGEN:HBG057074
SMART:SM00745 KO:K12196 CTD:9525 EMBL:BC055202 IPI:IPI00836860
RefSeq:NP_957200.1 UniGene:Dr.85231 ProteinModelPortal:Q7SXY0
SMR:Q7SXY0 STRING:Q7SXY0 PRIDE:Q7SXY0 GeneID:393880 KEGG:dre:393880
NextBio:20814861 ArrayExpress:Q7SXY0 Bgee:Q7SXY0 Uniprot:Q7SXY0
Length = 437
Score = 173 (66.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 49/152 (32%), Positives = 81/152 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF A+
Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLG-ESEKLVKSLFTLAR 217
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALATNRPG 380
+ K ++ FIDE D+ LC SEA R L + G+ ++ I++ ATN P
Sbjct: 218 EHKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGNDNEGILVLGATNIPW 275
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
LDSA+ R ++ + PLP + R + KL L
Sbjct: 276 TLDSAIRRRFEKRIYIPLPEEHARSFMFKLNL 307
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 443 LTDDILMEAAAKTEGFSGREIA 464
LT+ M KT+G+SG +I+
Sbjct: 314 LTESDFMTLGKKTDGYSGADIS 335
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 53/156 (33%), Positives = 82/156 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKTM AR +A ++ + + G + + G A + F AK+
Sbjct: 210 PPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKL-VRDAFALAKE 268
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQ-SKDIVLALATNRPG 380
K ++FIDE DA +R K E QR+ L L G Q + DI + ATNR
Sbjct: 269 -KAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRID 327
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ + R+D +E P P ++ R ++++++ K
Sbjct: 328 VLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRK 363
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 53/156 (33%), Positives = 82/156 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKTM AR +A ++ + + G + + G A + F AK+
Sbjct: 210 PPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKL-VRDAFALAKE 268
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQ-SKDIVLALATNRPG 380
K ++FIDE DA +R K E QR+ L L G Q + DI + ATNR
Sbjct: 269 -KAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRID 327
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ + R+D +E P P ++ R ++++++ K
Sbjct: 328 VLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRK 363
>FB|FBgn0027605 [details] [associations]
symbol:Vps4 "Vacuolar protein sorting 4" species:7227
"Drosophila melanogaster" [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0045197
"establishment or maintenance of epithelial cell apical/basal
polarity" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0006911 GO:GO:0030036
EMBL:AE014298 GO:GO:0006200 GO:GO:0016887 GO:GO:0044130
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
SMART:SM00745 GO:GO:0045197 GeneTree:ENSGT00550000074466
HSSP:Q9LCZ4 KO:K12196 OMA:FTGKRIP EMBL:AF145606 RefSeq:NP_573258.1
UniGene:Dm.3175 SMR:Q9Y162 IntAct:Q9Y162 MINT:MINT-919908
STRING:Q9Y162 EnsemblMetazoa:FBtr0074504 GeneID:32777
KEGG:dme:Dmel_CG6842 UCSC:CG6842-RA CTD:32777 FlyBase:FBgn0027605
InParanoid:Q9Y162 OrthoDB:EOG4K98TM ChiTaRS:Vps4 GenomeRNAi:32777
NextBio:780321 Uniprot:Q9Y162
Length = 442
Score = 162 (62.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 45/151 (29%), Positives = 78/151 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P++ +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF+ A+
Sbjct: 164 PWKGILLFGPPGTGKSYLAKAVATEANRSTFFSVSSSDLMSKWLG-ESEKLVKNLFELAR 222
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ R+ +R L+ G D +L L ATN P
Sbjct: 223 QHKPSII-FIDEIDSMCSARSDNENDSVRRIKTEFLVQMQGVGNDTDGILVLGATNIPWV 281
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
LDSA+ R ++ + PLP R + K++L
Sbjct: 282 LDSAIRRRFEKRIYIPLPEAHARLVMFKIHL 312
Score = 59 (25.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 443 LTDDILMEAAAKTEGFSGREIA 464
LT+ L E A KTEG+SG +I+
Sbjct: 319 LTEQDLKELAGKTEGYSGADIS 340
>UNIPROTKB|E2RA71 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 Pfam:PF04212 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 SMART:SM00745 GeneTree:ENSGT00550000074466 OMA:FTGKRIP
EMBL:AAEX03004108 Ensembl:ENSCAFT00000032306 NextBio:20854819
Uniprot:E2RA71
Length = 437
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF+ A+
Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELAR 217
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ RN+ A+R L+ G + D L L ATN P
Sbjct: 218 QHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWV 276
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ--QKIE 439
LDSA+ R ++ + PLP + R ++ +L+L + + +H L + + +
Sbjct: 277 LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLG---STPHNLTDANIHELARKTEGYSGAD 333
Query: 440 IKGLTDDILMEAAAKTE 456
I + D LM+ K +
Sbjct: 334 ISIIVRDSLMQPVRKVQ 350
>UNIPROTKB|Q9UN37 [details] [associations]
symbol:VPS4A "Vacuolar protein sorting-associated protein
4A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP;TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0042623 "ATPase activity, coupled" evidence=NAS]
[GO:0000910 "cytokinesis" evidence=IDA] [GO:0030496 "midbody"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000815 "ESCRT III complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0048471 GO:GO:0016192 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 GO:GO:0000910
Pfam:PF04212 eggNOG:COG0464 GO:GO:0030496 EMBL:CH471092
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016044 HOVERGEN:HBG057074
GO:GO:0042623 SMART:SM00745 PDB:2JQ9 PDBsum:2JQ9 PDB:2K3W
PDBsum:2K3W HOGENOM:HOG000225146 EMBL:AF255952 EMBL:AF282903
EMBL:AF132747 EMBL:AF159063 EMBL:AF112215 EMBL:AK315026
EMBL:BC047932 EMBL:AF155740 IPI:IPI00411356 RefSeq:NP_037377.1
UniGene:Hs.128420 PDB:1YXR PDBsum:1YXR ProteinModelPortal:Q9UN37
SMR:Q9UN37 IntAct:Q9UN37 STRING:Q9UN37 PhosphoSite:Q9UN37
DMDM:62511240 PaxDb:Q9UN37 PRIDE:Q9UN37 DNASU:27183
Ensembl:ENST00000254950 GeneID:27183 KEGG:hsa:27183 UCSC:uc002eww.3
CTD:27183 GeneCards:GC16P069335 HGNC:HGNC:13488 HPA:CAB018751
MIM:609982 neXtProt:NX_Q9UN37 PharmGKB:PA38362 InParanoid:Q9UN37
KO:K12196 OMA:FTGKRIP OrthoDB:EOG4G1MGD ChiTaRS:VPS4A
EvolutionaryTrace:Q9UN37 GenomeRNAi:27183 NextBio:50017
ArrayExpress:Q9UN37 Bgee:Q9UN37 CleanEx:HS_VPS4A
Genevestigator:Q9UN37 GermOnline:ENSG00000132612 Uniprot:Q9UN37
Length = 437
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF+ A+
Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELAR 217
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ RN+ A+R L+ G + D L L ATN P
Sbjct: 218 QHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWV 276
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ--QKIE 439
LDSA+ R ++ + PLP + R ++ +L+L + + +H L + + +
Sbjct: 277 LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLG---STPHNLTDANIHELARKTEGYSGAD 333
Query: 440 IKGLTDDILMEAAAKTE 456
I + D LM+ K +
Sbjct: 334 ISIIVRDSLMQPVRKVQ 350
>MGI|MGI:1890520 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4a (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017048 "Rho GTPase binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO;IDA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1890520 GO:GO:0005524 GO:GO:0048471
GO:GO:0051301 GO:GO:0016192 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AF530161 EMBL:AK047821
EMBL:AK159117 EMBL:BC018368 IPI:IPI00312172 RefSeq:NP_569053.1
UniGene:Mm.236004 ProteinModelPortal:Q8VEJ9 SMR:Q8VEJ9
STRING:Q8VEJ9 PhosphoSite:Q8VEJ9 PaxDb:Q8VEJ9 PRIDE:Q8VEJ9
Ensembl:ENSMUST00000034388 GeneID:116733 KEGG:mmu:116733
UCSC:uc009ngv.1 InParanoid:Q8VEJ9 OMA:VRWNDVA NextBio:369058
Bgee:Q8VEJ9 CleanEx:MM_VPS4A Genevestigator:Q8VEJ9
GermOnline:ENSMUSG00000031913 Uniprot:Q8VEJ9
Length = 437
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF+ A+
Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELAR 217
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ RN+ A+R L+ G + D L L ATN P
Sbjct: 218 QHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWV 276
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ--QKIE 439
LDSA+ R ++ + PLP + R ++ +L+L + + +H L + + +
Sbjct: 277 LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLG---STPHNLTDANIHELARKTEGYSGAD 333
Query: 440 IKGLTDDILMEAAAKTE 456
I + D LM+ K +
Sbjct: 334 ISIIVRDSLMQPVRKVQ 350
>RGD|628810 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4 homolog A (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000910
"cytokinesis" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016197 "endosomal transport" evidence=IC;ISO]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0000815 "ESCRT III complex" evidence=ISO] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:628810 GO:GO:0005524
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF+ A+
Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELAR 217
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ RN+ A+R L+ G + D L L ATN P
Sbjct: 218 QHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWV 276
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ--QKIE 439
LDSA+ R ++ + PLP + R ++ +L+L + + +H L + + +
Sbjct: 277 LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLG---STPHNLTDANIHELARKTEGYSGAD 333
Query: 440 IKGLTDDILMEAAAKTE 456
I + D LM+ K +
Sbjct: 334 ISIIVRDSLMQPVRKVQ 350
>UNIPROTKB|Q793F9 [details] [associations]
symbol:Vps4a "Vacuolar protein sorting-associated protein
4A" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:628810 GO:GO:0005524 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0017111 HSSP:O75351 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 CTD:27183
KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF+ A+
Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELAR 217
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ RN+ A+R L+ G + D L L ATN P
Sbjct: 218 QHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWV 276
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ--QKIE 439
LDSA+ R ++ + PLP + R ++ +L+L + + +H L + + +
Sbjct: 277 LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLG---STPHNLTDANIHELARKTEGYSGAD 333
Query: 440 IKGLTDDILMEAAAKTE 456
I + D LM+ K +
Sbjct: 334 ISIIVRDSLMQPVRKVQ 350
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 218 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 276
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 277 HGPSIV-FIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ RID +EFPLP ++ + ++ +++ +
Sbjct: 336 TLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371
>UNIPROTKB|Q719N1 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISS] [GO:0001578 "microtubule bundle
formation" evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0034214 "protein hexamerization" evidence=ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0048487
"beta-tubulin binding" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0048487
GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0043014 SMART:SM00745 GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OrthoDB:EOG4NZTTF EMBL:AF540879
RefSeq:NP_998914.1 UniGene:Ssc.19685 STRING:Q719N1 GeneID:396584
KEGG:ssc:396584 Uniprot:Q719N1
Length = 613
Score = 182 (69.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 370 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 428
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK--DIVLAL-ATNRPG 380
+ + ++ FIDE D+ L ER + ++R L+ G QS D VL + ATNRP
Sbjct: 429 ELQPSII-FIDEVDSLLRERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ 487
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+LD AV R + + LP +E R LLK L K
Sbjct: 488 ELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCK 521
Score = 42 (19.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 443 LTDDILMEAAAKTEGFSGREIAKL 466
LT L + A T+G+SG ++ L
Sbjct: 526 LTQKELAQLARLTDGYSGSDLTAL 549
>UNIPROTKB|I3LL27 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 CTD:27183 KO:K12196 OMA:VRWNDVA
EMBL:FP015939 EMBL:FP325157 RefSeq:NP_001230347.1 UniGene:Ssc.15717
Ensembl:ENSSSCT00000026219 GeneID:100627841 KEGG:ssc:100627841
Uniprot:I3LL27
Length = 437
Score = 177 (67.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF+ A+
Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLG-ESEKLVKNLFELAR 217
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG-DQSKDIVLAL-ATNRPGD 381
+ K ++ FIDE D+ RN+ A+R L+ G + D L L ATN P
Sbjct: 218 QHKPSII-FIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWV 276
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQ--QKIE 439
LDSA+ R ++ + PLP + R ++ +L+L + + +H L + + +
Sbjct: 277 LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLG---STPHNLTEANIHELARKTEGYSGAD 333
Query: 440 IKGLTDDILMEAAAKTE 456
I + D LM+ K +
Sbjct: 334 ISIIVRDSLMQPVRKVQ 350
Score = 42 (19.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 245 PSLQKRIRQLSGATANTKAHN 265
P+LQK I ++ AT KA N
Sbjct: 4 PTLQKAIDLVTKATEEDKAKN 24
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 183 (69.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 43/149 (28%), Positives = 78/149 (52%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKSKR 327
+ +L YGPPG GKT+ A+ +A + ++ + G ++ + ++ + LFD A+ +
Sbjct: 969 KGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASP 1028
Query: 328 GLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLDSA 385
++F DE D+ ERN ++A +N +L ++ K I + ATNRP LD A
Sbjct: 1029 -CIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKA 1087
Query: 386 VA--DRIDEVLEFPLPGQEERFKLLKLYL 412
+ R+D+++ LP + R+ + K L
Sbjct: 1088 LTRPGRLDKLIYISLPDLKSRYSIFKAIL 1116
Score = 174 (66.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/150 (31%), Positives = 87/150 (58%)
Query: 265 NAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWA 322
+AP + +L +G PGTGKT A+ +A +S ++ G ++ +G ++ K+ ++F A
Sbjct: 559 SAP-KGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIG-ESEQKLRKIFKKA 616
Query: 323 KKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSKDIVLALA-TNRPG 380
+ K ++FIDE D+ +R+K+ +E ++ ++ LL G + + VL LA TNRP
Sbjct: 617 SE-KTPCIIFIDEIDSIANKRSKSN-NELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPN 674
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLL 408
+D A+ R D +E P+P ++ R+++L
Sbjct: 675 SIDPALRRFGRFDREIEIPVPDEQGRYEIL 704
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 183 (69.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 43/149 (28%), Positives = 78/149 (52%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-PQAVTKIHQLFDWAKKSKR 327
+ +L YGPPG GKT+ A+ +A + ++ + G ++ + ++ + LFD A+ +
Sbjct: 969 KGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASP 1028
Query: 328 GLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLDSA 385
++F DE D+ ERN ++A +N +L ++ K I + ATNRP LD A
Sbjct: 1029 -CIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKA 1087
Query: 386 VA--DRIDEVLEFPLPGQEERFKLLKLYL 412
+ R+D+++ LP + R+ + K L
Sbjct: 1088 LTRPGRLDKLIYISLPDLKSRYSIFKAIL 1116
Score = 174 (66.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/150 (31%), Positives = 87/150 (58%)
Query: 265 NAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWA 322
+AP + +L +G PGTGKT A+ +A +S ++ G ++ +G ++ K+ ++F A
Sbjct: 559 SAP-KGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIG-ESEQKLRKIFKKA 616
Query: 323 KKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSKDIVLALA-TNRPG 380
+ K ++FIDE D+ +R+K+ +E ++ ++ LL G + + VL LA TNRP
Sbjct: 617 SE-KTPCIIFIDEIDSIANKRSKSN-NELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPN 674
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLL 408
+D A+ R D +E P+P ++ R+++L
Sbjct: 675 SIDPALRRFGRFDREIEIPVPDEQGRYEIL 704
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 180 (68.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 67/225 (29%), Positives = 111/225 (49%)
Query: 205 SSRGKYPWSGLFS-RTLKSLRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKA 263
SS+GK G+ S T K K L + F DV+ + ++ L N +
Sbjct: 134 SSKGKDK-GGIMSILTSKPF----KTLVERPNTTFADVMGAEEAKGELQDLVDFLRNPEK 188
Query: 264 H---NAPF-RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV--APLGPQAVTKIHQ 317
+ N + +L GPPGTGKT+ A+ LA ++ + + + G + A +G A ++ +
Sbjct: 189 YYRRNIVMPKGILLVGPPGTGKTLLAKSLAGEARVSFITINGSEFEEAFVGVGA-KRVRE 247
Query: 318 LFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALA 375
LF+ A+K+ ++FIDE D+ R K ++ ALN LL D + +++ A
Sbjct: 248 LFEAARKNSP-CIVFIDEIDSVGGSRTKR-VNYHPSEALNQLLVELDGFDGREGVMVMAA 305
Query: 376 TNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYL-DKYIA 417
TN LD+A+ + R D +++ PLP + R ++ YL DK IA
Sbjct: 306 TNYQDSLDTALIRSGRFDRIIQVPLPDGKARKSIIDHYLKDKPIA 350
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 176 (67.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 49/154 (31%), Positives = 84/154 (54%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L +GPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 194 KGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG-EGARMVRELFVMAREHA 252
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + +K+I + +ATNR L
Sbjct: 253 PSII-FMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 311
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
D A+ RID +EFP P ++ R +LK++ K
Sbjct: 312 DPALLRPGRIDRKIEFPAPDEKARADILKIHSRK 345
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 182 (69.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 55/167 (32%), Positives = 87/167 (52%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSK 326
+ +L GPPGTGKT+ AR A ++G+ + M+G + L G A +I +LF A+ K
Sbjct: 259 KGVLLTGPPGTGKTLLARATAGEAGVPFFFMSGSEFDELYVGVGA-KRIRELFSQAR-DK 316
Query: 327 RGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLDS 384
++FIDE DA +RN + A+++ LN LL Q++ I++ ATN P LD
Sbjct: 317 APAIIFIDELDAIGGKRNPKDQAYAKQT-LNQLLVELDGFSQTEGIIIIGATNFPESLDK 375
Query: 385 AVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHR 429
A+ R D+ + LP R +LK ++ + A P ++ R
Sbjct: 376 ALTRPGRFDKEVIVDLPDVRGRIDILKHHMQN-VETADDVDPSIIAR 421
Score = 43 (20.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 40 YKFDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTE 91
Y + L+Q A + E V++ ++ ++ Q +A E Q Q+ QT+
Sbjct: 88 YNYPHILVQRFETQGIASSPECVQLYIDALNKVGQTAKAAEVARQQQQHQTQ 139
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 180 (68.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 58/183 (31%), Positives = 90/183 (49%)
Query: 247 LQKRIRQLSGATANTKAHNAPFRNM--------LFYGPPGTGKTMAARELARKSGLDYAL 298
L K+I++L A H F+N+ + YGPPGTGKT+ AR A ++ +
Sbjct: 184 LDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLK 243
Query: 299 MTGGDVAPL--GPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCER---NKTYMSEAQR 353
+ G + + G A + F AK+ K ++FIDE DA +R K E QR
Sbjct: 244 LAGPQLVQMFIGDGAKL-VRDAFALAKE-KAPAIIFIDELDAIGTKRFDSEKAGDREVQR 301
Query: 354 SALNALLFRTGDQSK-DIVLALATNRPGDLDSAV-ADRIDEVLEFPLPGQEERFKLLKLY 411
+ L L G S DI + ATNR L + + + R+D +EFP P +E R ++++++
Sbjct: 302 TMLELLNQLNGFSSTADIKVIAATNRVDILPALLRSGRLDRKIEFPHPNEEARARIMQIH 361
Query: 412 LDK 414
K
Sbjct: 362 SRK 364
Score = 38 (18.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 73 EQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAE 111
E+ R + ++I ++ R + E ++ E IR+ +A+
Sbjct: 24 EKVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQ 62
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 181 (68.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 50/156 (32%), Positives = 79/156 (50%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ A+ +A G ++ + +G A I ++F +AK+
Sbjct: 214 PPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARI-IREMFAYAKE 272
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G D + +ATNRP
Sbjct: 273 HEP-CIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPD 331
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R+D +E PLP + R ++ K++ K
Sbjct: 332 TLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAK 367
Score = 37 (18.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 20/120 (16%), Positives = 51/120 (42%)
Query: 48 QAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQT---EREKAEIERETIRV 104
Q +E + QE + EE R++ + A + + KR+ R ++++ +
Sbjct: 22 QQSHEQQPEQPQETEEHHEEEPSRVDPEQEAHNKALNQFKRKLLEHRRYDDQLKQRRQNI 81
Query: 105 RAMAEAEGRA-HEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNK 163
R + + + ++ K + + + + EK+I ++ +I G ++ D++K
Sbjct: 82 RDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSV--DRSK 139
>CGD|CAL0000992 [details] [associations]
symbol:VPS4 species:5476 "Candida albicans" [GO:0006623
"protein targeting to vacuole" evidence=IMP] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0045324
"late endosome to vacuole transport" evidence=IMP] [GO:0000815
"ESCRT III complex" evidence=ISS] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0071285 "cellular response to lithium ion" evidence=IMP]
[GO:0030448 "hyphal growth" evidence=IMP] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0045053 "protein retention in Golgi
apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0016125
"sterol metabolic process" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0000992 GO:GO:0005524 GO:GO:0009405 GO:GO:0009306
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 GO:GO:0030448 GO:GO:0007033 GO:GO:0006623
GO:GO:0045324 GO:GO:0000815 GO:GO:0071285 EMBL:AACQ01000022
GO:GO:0044182 SMART:SM00745 KO:K12196 RefSeq:XP_720644.1
ProteinModelPortal:Q5AG40 SMR:Q5AG40 STRING:Q5AG40 GeneID:3637703
KEGG:cal:CaO19.4339 Uniprot:Q5AG40
Length = 439
Score = 179 (68.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 48/149 (32%), Positives = 80/149 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P +L YGPPGTGK+ A+ +A ++ + ++ D+ +G ++ + QLF A++
Sbjct: 167 PTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMG-ESERLVKQLFTMARE 225
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALATNRPGD 381
+K ++ FIDE DA LC SEA R LL + G+ S+ +++ ATN P
Sbjct: 226 NKPSII-FIDEVDA-LCGPRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQ 283
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKL 410
LD+AV R + + LP E R ++ ++
Sbjct: 284 LDAAVRRRFERRIYIALPDVEARTRMFEI 312
Score = 39 (18.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 452 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVD 492
A T+G+SG ++A + V+ A+ + + F+ V+D
Sbjct: 330 AEMTDGYSGHDVAVV---VRDALMQPIRKIQQATHFKPVID 367
>UNIPROTKB|Q5AG40 [details] [associations]
symbol:VPS4 "Potential vacuolar sorting ATPase"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0007033 "vacuole organization" evidence=IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0030448 "hyphal growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000992 GO:GO:0005524 GO:GO:0009405
GO:GO:0009306 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030448 GO:GO:0007033
GO:GO:0006623 GO:GO:0045324 GO:GO:0000815 GO:GO:0071285
EMBL:AACQ01000022 GO:GO:0044182 SMART:SM00745 KO:K12196
RefSeq:XP_720644.1 ProteinModelPortal:Q5AG40 SMR:Q5AG40
STRING:Q5AG40 GeneID:3637703 KEGG:cal:CaO19.4339 Uniprot:Q5AG40
Length = 439
Score = 179 (68.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 48/149 (32%), Positives = 80/149 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P +L YGPPGTGK+ A+ +A ++ + ++ D+ +G ++ + QLF A++
Sbjct: 167 PTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMG-ESERLVKQLFTMARE 225
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALATNRPGD 381
+K ++ FIDE DA LC SEA R LL + G+ S+ +++ ATN P
Sbjct: 226 NKPSII-FIDEVDA-LCGPRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQ 283
Query: 382 LDSAVADRIDEVLEFPLPGQEERFKLLKL 410
LD+AV R + + LP E R ++ ++
Sbjct: 284 LDAAVRRRFERRIYIALPDVEARTRMFEI 312
Score = 39 (18.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 452 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVD 492
A T+G+SG ++A + V+ A+ + + F+ V+D
Sbjct: 330 AEMTDGYSGHDVAVV---VRDALMQPIRKIQQATHFKPVID 367
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 165 (63.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 52/150 (34%), Positives = 74/150 (49%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGG--DVAPLGPQAVTKIHQLFDWAKKSK 326
R +L GPPGTGKTM AR +A ++ + + M+G D +G A ++ +LF A+K
Sbjct: 301 RGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGA-KRVRELFAAARKQA 359
Query: 327 RGLLLFIDEADAFLCERNKTYMSEAQRSALNALLF------RTGDQSKDIVLALATNRPG 380
++ FIDE DA +RN + R LN LL + D + +V ATN P
Sbjct: 360 PSII-FIDELDAIGQKRNARDAAH-MRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPE 417
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLL 408
LD A+ R D + PLP R +L
Sbjct: 418 SLDPALTRPGRFDRHIHVPLPDVRGRLAIL 447
Score = 61 (26.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 443 LTDDILMEAAAK-TEGFSGREIAKLMASVQAAVYGSEN 479
L D+ + A+ T GF+G ++A L+ QAAVY S+N
Sbjct: 456 LGKDVDLSIIARGTSGFAGADLANLIN--QAAVYASKN 491
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 177 (67.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 59/213 (27%), Positives = 102/213 (47%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + ++ YGPPGTGKT+ A+ +A ++ + + G ++ LG + +LF A++
Sbjct: 217 PPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLG-DGPKLVRELFRVAEE 275
Query: 325 SKRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
++ FIDE DA +R N E QR+ L L G S+ D+ + +ATNR
Sbjct: 276 HAPSIV-FIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 334
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKI 438
LD A+ RID +EFPLP ++ + ++ ++ + L+ + K +
Sbjct: 335 TLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELI--MAKDDLSGA 392
Query: 439 EIKGL-TDDILMEAAAKTEGFSGREIAKLMASV 470
+IK + T+ LM + + + K SV
Sbjct: 393 DIKAICTEAGLMALRERRMKVTNEDFKKSKESV 425
Score = 41 (19.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 47 LQAENEYHRARNQELVKMQEESS 69
L E+E+ RNQE +K Q+E +
Sbjct: 71 LMMEDEF--IRNQERLKPQDEKN 91
>UNIPROTKB|Q5ZMI9 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA] [GO:0033993 "response to lipid"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
KO:K12196 CTD:9525 OMA:AKCAEYL EMBL:AC159826 EMBL:AJ719395
IPI:IPI00582043 RefSeq:NP_001006378.2 UniGene:Gga.8210 SMR:Q5ZMI9
STRING:Q5ZMI9 Ensembl:ENSGALT00000021007 GeneID:420901
KEGG:gga:420901 InParanoid:Q5ZMI9 NextBio:20823751 Uniprot:Q5ZMI9
Length = 438
Score = 174 (66.3 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 49/152 (32%), Positives = 81/152 (53%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLD-YALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
P+R +L +GPPGTGK+ A+ +A ++ + ++ D+ LG ++ + LF A+
Sbjct: 161 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLVSKWLG-ESEKLVKNLFQLAR 219
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFR---TGDQSKDIVLALATNRPG 380
++K ++ FIDE D+ LC SEA R L + G ++ I++ ATN P
Sbjct: 220 ENKPSII-FIDEIDS-LCGSRSENESEAARRIKTEFLVQMQGVGVDNEGILVLGATNIPW 277
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYL 412
LDSA+ R ++ + PLP R + KL+L
Sbjct: 278 VLDSAIRRRFEKRIYIPLPEDHARAAMFKLHL 309
Score = 41 (19.5 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 443 LTDDILMEAAAKTEGFSGREIA 464
LT+ E +T+G+SG +I+
Sbjct: 316 LTEADYRELGKRTDGYSGADIS 337
Score = 40 (19.1 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 22/108 (20%), Positives = 47/108 (43%)
Query: 36 FRHVYKFDWHLLQAENEYHRARNQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKA 95
++H ++ H+++ E + +A+ VK E L++A + E +KR+ K
Sbjct: 31 YQHAVQYLIHVVKYETQGDKAKQSIRVKCAEY----LDRAEKLKE---YLKKREKTAPKP 83
Query: 96 EIERETIRVRAM-AEAEGRAHEA---KLAEDVNRRMLVDRANAEREKW 139
E + ++ EG + + KL + ++++R N KW
Sbjct: 84 VKESGPADGKGNDSDGEGESEDPEKKKLQNQLQGAIVMERPNV---KW 128
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 175 (66.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 197 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 255
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 256 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 314
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 315 TLDPALLRPGRLDRKIEFPLPDRRQK 340
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQK 341
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQK 341
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQK 341
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQK 341
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQK 341
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQK 341
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPG GKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 256
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA +R E QR L L G DQ+ ++ + +ATNR
Sbjct: 257 NAPAII-FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 316 TLDPALLCPGRLDRKIEFPLPDRRQK 341
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 178 (67.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P R +L YGPPGTGKTM A+ +A + + + G + LG + + +F AK+
Sbjct: 188 PPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKE 246
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++ FIDE DA R E QR + L G DQ+ ++ + +ATNR
Sbjct: 247 NAPAII-FIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRAD 305
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEER 404
LD A+ R+D +EFPLP + ++
Sbjct: 306 TLDPALLRPGRLDRKIEFPLPDRRQK 331
Score = 38 (18.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 80 EEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHE 116
EE ++ +++ +RE + E R++++ G+ E
Sbjct: 48 EEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFME 84
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 178 (67.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 50/151 (33%), Positives = 81/151 (53%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ ++ YGPPGTGKT+ AR +A + + ++G ++ +G + + +LF A++
Sbjct: 179 KGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIG-EGSRMVRELFVMAREHA 237
Query: 327 RGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 382
++ F+DE D+ R + SE QR+ L L G + SKDI + +ATNR L
Sbjct: 238 PSII-FMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDIL 296
Query: 383 DSAVA--DRIDEVLEFPLPGQEERFKLLKLY 411
D A+ RID +EFP P R +LK++
Sbjct: 297 DPALLRPGRIDRKIEFPAPTVAARTDILKIH 327
Score = 37 (18.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 67 ESSIR--LEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAE 109
E IR EQ + TE +IQ + R +A+ + +VR + +
Sbjct: 12 EGGIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKD 56
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 174 (66.3 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 48/156 (30%), Positives = 82/156 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + L +GPPGTGKT+ AR +A + ++ + + +G A I ++F++A+
Sbjct: 183 PPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESA-RMIREMFNYAR- 240
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G D + + +ATNRP
Sbjct: 241 DHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPD 300
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R+D +E LP ++ R ++LK++ +K
Sbjct: 301 TLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNK 336
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 174 (66.3 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 48/156 (30%), Positives = 82/156 (52%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + L +GPPGTGKT+ AR +A + ++ + + +G A I ++F++A+
Sbjct: 183 PPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESA-RMIREMFNYAR- 240
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
+ ++F+DE DA R S E QR+ + L G D + + +ATNRP
Sbjct: 241 DHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPD 300
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R+D +E LP ++ R ++LK++ +K
Sbjct: 301 TLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNK 336
WARNING: HSPs involving 368 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 512 498 0.00084 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 618
No. of states in DFA: 625 (66 KB)
Total size of DFA: 281 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.48u 0.09s 50.57t Elapsed: 00:00:03
Total cpu time: 50.52u 0.09s 50.61t Elapsed: 00:00:03
Start: Thu May 9 23:10:19 2013 End: Thu May 9 23:10:22 2013
WARNINGS ISSUED: 2