BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010366
(512 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NVR9|ATAD3_XENTR ATPase family AAA domain-containing protein 3 OS=Xenopus tropicalis
GN=atad3 PE=2 SV=1
Length = 594
Score = 315 bits (807), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 188/478 (39%), Positives = 277/478 (57%), Gaps = 29/478 (6%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E + H+AR Q +L + + E +R +Q + R EE +Q Q ++ T +
Sbjct: 115 LNEETKQHQARAQYQDKLARQRYEDQLRQQQLQNEENLRRQEESVQKQEAMRKATVEHEM 174
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 175 ELRHKNEMLRIEAEARARAKVERENADIIRENIRLKAAEHRQTVLESIKTAGTVFGEGFR 234
Query: 156 AILTDQNKLVVAVGGATALAAGIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
A ++D +K+ V G + LA GIYT + V Y++ LG+PSL+R++SR
Sbjct: 235 AFISDWDKVTATVAGLSLLAVGIYTAKNATGVAGRYIEARLGKPSLVRDTSRF------T 288
Query: 216 FSRTLKSLRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYG 275
+ +K K L SK + VIL P L++R+R ++ AT NTKA+ +RN+L YG
Sbjct: 289 VAEAVKHPVKISKRLLSKIQDALEGVILSPKLEERVRDIAIATRNTKANKGLYRNILMYG 348
Query: 276 PPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDE 335
PPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +H++FDWA SKRGLLLF+DE
Sbjct: 349 PPGTGKTLFAKKLAMHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWAGTSKRGLLLFVDE 408
Query: 336 ADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLE 395
ADAFL +R+ +SE R+ LNA L+RTG+QS +L LA+N+P D A+ DRIDE++
Sbjct: 409 ADAFLRKRSTEKISEDLRATLNAFLYRTGEQSNKFMLVLASNQPEQFDWAINDRIDEIVH 468
Query: 396 FPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLT-DDILMEAAAK 454
F LPG EER +L++LY DKY+ Q S +Q++++ + A
Sbjct: 469 FDLPGLEERERLVRLYFDKYVLQPASEG-----------KQRLKVAQFDYGKKCSDLAQL 517
Query: 455 TEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGGGSN 512
TEG SGREI+KL + QAA Y SE+ +L+ ++ V + +HQQ+ + A G N
Sbjct: 518 TEGMSGREISKLGVAWQAAAYASEDGILNEAMIDARVADAIRQHQQKMEWLKAEGKEN 575
>sp|Q20748|ATAD3_CAEEL ATPase family AAA domain-containing protein 3 OS=Caenorhabditis
elegans GN=atad-3 PE=3 SV=2
Length = 595
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/451 (41%), Positives = 274/451 (60%), Gaps = 41/451 (9%)
Query: 59 QELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGR---AH 115
+E ++ QEES + EQ R+ T E A K + E EK + E R RA A + R
Sbjct: 150 EESLRKQEESVKKQEQLRKQTIEHELALKHKYELEKIDAE---TRARAKAARDNRDVNLE 206
Query: 116 EAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKLVVAVGGATALA 175
+ KL E+ NR+ ++++ I T+ + IG GL L D+ K+ AVGG TALA
Sbjct: 207 QMKLHEEENRKTVIEK-----------IKTSGELIGSGLNQFLNDKTKIAAAVGGLTALA 255
Query: 176 AGIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGGDKELASKNG 235
G YT + G V Y++ LG+PSL+RE+SR P + +KS++ + +
Sbjct: 256 VGWYTAKRGTGVTARYIESRLGKPSLVRETSR-ITPLE-VLKHPIKSVQM----MTRQKK 309
Query: 236 NGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLD 295
+ V+L P+L++R+R ++ T+NTK +N FRN++FYGPPGTGKT+ A+ LA+ SGLD
Sbjct: 310 DPLNGVVLPPALERRLRDIAITTSNTKRNNGLFRNVMFYGPPGTGKTLFAKSLAQHSGLD 369
Query: 296 YALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSA 355
YA++TGGD+APLG V+ IH++FDWA KS++GL++FIDEADAFL +R+K MSE R+A
Sbjct: 370 YAVLTGGDIAPLGRDGVSAIHKVFDWASKSRKGLIVFIDEADAFLQKRSKNGMSEDTRAA 429
Query: 356 LNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKY 415
LNA LFRTG+QS+ +L +A+N+P D AV DR D+++EF LPG EER ++L Y +++
Sbjct: 430 LNAFLFRTGEQSRKFMLVVASNQPEQFDWAVNDRFDQLVEFTLPGMEERERILLQYFNEH 489
Query: 416 I---AQAGSRKPGLVHRLFKSEQQKIEIKGLTDDI--LMEAAAKTEGFSGREIAKLMASV 470
I A +GSR Q++++ D + E A KT G SGRE++KL+
Sbjct: 490 IVTPATSGSR------------SQRLKLDNF-DWVAKCNEVAKKTSGMSGRELSKLVIGW 536
Query: 471 QAAVYGSENCVLDPSLFREVVDYKVAEHQQR 501
QA+ Y SE VL ++ + +H+ +
Sbjct: 537 QASAYASETGVLTEAIVDRNTADAMVQHEHK 567
>sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protein 3-B OS=Xenopus laevis
GN=atad3-b PE=2 SV=1
Length = 593
Score = 311 bits (798), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 186/475 (39%), Positives = 273/475 (57%), Gaps = 29/475 (6%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E + H+AR Q +L + + E +R +Q + R EE +Q Q ++ T +
Sbjct: 115 LNEETKQHQARAQYQDKLARQRYEDQLRQQQLQNEENLRRQEESVQKQEAMRKATVEHEM 174
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA RA + D+ R + +A R+ + +I T G G R
Sbjct: 175 ELRHKNDMLRIEAEAHARAKVERENADIIREQIRLKAAEHRQTVLESIKTAGTVFGEGFR 234
Query: 156 AILTDQNKLVVAVGGATALAAGIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
++D +K+ V G T LA G+YT + G V Y++ LG+PSL+R++SR
Sbjct: 235 TFISDWDKVTATVAGLTLLAVGVYTAKNGTGVAGRYIEARLGKPSLVRDTSRI------T 288
Query: 216 FSRTLKSLRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYG 275
+K K + SK + VIL P L++R+R ++ AT NTKA+ +RN+L YG
Sbjct: 289 VVEAIKHPIKISKRIFSKIQDALEGVILSPRLEERVRDIAIATRNTKANKGLYRNILMYG 348
Query: 276 PPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDE 335
PPGTGKT+ A++LA S +DYA+MTGGDVAP+G + VT +H++FDWA SKRGLLLF+DE
Sbjct: 349 PPGTGKTLFAKKLAMHSSMDYAIMTGGDVAPMGREGVTAMHKVFDWAGTSKRGLLLFVDE 408
Query: 336 ADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLE 395
ADAFL +R+ +SE R+ LNA L+RTG+QS +L LA+N+P D A+ DRIDE++
Sbjct: 409 ADAFLRKRSTEKISEDLRATLNAFLYRTGEQSNKFMLVLASNQPEQFDWAINDRIDEIVH 468
Query: 396 FPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLT-DDILMEAAAK 454
F LPG EER +L++LY DKY+ Q S +Q++++ E A
Sbjct: 469 FDLPGLEERERLVRLYFDKYVLQPASEG-----------KQRLKVAQFDYGKKCSELATL 517
Query: 455 TEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGG 509
TEG SGREI+KL + QAA Y SE+ +L ++ V + +HQQ+ + A G
Sbjct: 518 TEGMSGREISKLGVAWQAAAYASEDGILTEAMIDARVADAIRQHQQKMEWLKAEG 572
>sp|Q58E76|ATD3A_XENLA ATPase family AAA domain-containing protein 3-A OS=Xenopus laevis
GN=atad3-a PE=2 SV=1
Length = 593
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/467 (39%), Positives = 271/467 (58%), Gaps = 29/467 (6%)
Query: 47 LQAENEYHRARNQ---ELVKMQEESSIRLEQAR-----RATEEQIQAQ---KRQTEREKA 95
L E + H+AR Q +L + + E +R +Q + R E+ +Q Q +R T +
Sbjct: 115 LNEETKQHQARAQYQDKLARQRYEDQLRQQQLQNEENLRRQEDSVQKQEAMRRATVEHEM 174
Query: 96 EIERETIRVRAMAEAEGRAHEAKLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLR 155
E+ + +R AEA +A + D+ R + +A R+ + +I T G G R
Sbjct: 175 ELRHKNEMLRIEAEARAQAKVERENADIIREQIRLKAAEHRQTVLESIKTAGTVFGEGFR 234
Query: 156 AILTDQNKLVVAVGGATALAAGIYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGL 215
++D +K+ V G T LA G+YT + V Y++ LG+PSL+R++SR
Sbjct: 235 TFISDWDKVTATVAGLTLLAVGVYTAKNATGVAGRYIEARLGKPSLVRDTSRI------T 288
Query: 216 FSRTLKSLRGGDKELASKNGNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYG 275
+ +K K L SK + VIL P L++R+R ++ AT NTKA+ +RN+L YG
Sbjct: 289 VAEAVKHPIKITKRLYSKIQDALEGVILSPRLEERVRDIAIATRNTKANKGLYRNILMYG 348
Query: 276 PPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDE 335
PPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +H++FDWA SKRGLLLF+DE
Sbjct: 349 PPGTGKTLFAKKLAMHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWAGTSKRGLLLFVDE 408
Query: 336 ADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLE 395
ADAFL +R+ +SE R+ LNA L+RTG+QS +L LA+N+P D A+ DRIDE++
Sbjct: 409 ADAFLRKRSTEKISEDLRATLNAFLYRTGEQSNKFMLVLASNQPEQFDWAINDRIDEIVH 468
Query: 396 FPLPGQEERFKLLKLYLDKYIAQAGSR-KPGLVHRLFKSEQQKIEIKGLTDDILMEAAAK 454
F LPG EER +L++LY DKY+ Q S K L F ++ E+ L
Sbjct: 469 FDLPGLEERERLVRLYFDKYVLQPASEGKQRLKVAQFDYGKKCSELSKL----------- 517
Query: 455 TEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQR 501
TEG SGREI+KL + QAA Y SE+ +L ++ V + +HQQ+
Sbjct: 518 TEGMSGREISKLGVAWQAAAYASEDGILTEAMIDARVADAIRQHQQK 564
>sp|Q9NVI7|ATD3A_HUMAN ATPase family AAA domain-containing protein 3A OS=Homo sapiens
GN=ATAD3A PE=1 SV=2
Length = 634
Score = 299 bits (765), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 187/458 (40%), Positives = 265/458 (57%), Gaps = 36/458 (7%)
Query: 58 NQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEA 117
N+E ++ QEES + E RRAT ERE E+ + +R AEA RA
Sbjct: 200 NEENLRKQEESVQKQEAMRRAT----------VERE-MELRHKNEMLRVEAEARARAKAE 248
Query: 118 KLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKLVVAVGGATALAAG 177
+ D+ R + +A R+ + +I T G G RA +TD +K+ V G T LA G
Sbjct: 249 RENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVG 308
Query: 178 IYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGG---DKELASKN 234
+Y+ + V +++ LG+PSL+RE+SR L++LR + L S+
Sbjct: 309 VYSAKNATLVAGRFIEARLGKPSLVRETSR---------ITVLEALRHPIQVSRRLLSRP 359
Query: 235 GNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGL 294
+ V+L PSL+ R+R ++ AT NTK + + +RN+L YGPPGTGKT+ A++LA SG+
Sbjct: 360 QDALEGVVLSPSLEARVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGM 419
Query: 295 DYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRS 354
DYA+MTGGDVAP+G + VT +H+LFDWA S+RGLLLF+DEADAFL +R +SE R+
Sbjct: 420 DYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRATEKISEDLRA 479
Query: 355 ALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LNA L+RTG S +L LA+N+P D A+ DRI+E++ F LPGQEER +L+++Y DK
Sbjct: 480 TLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMYFDK 539
Query: 415 YIAQAGSR-KPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAA 473
Y+ + + K L F ++ E+ L TEG SGREIA+L S QA
Sbjct: 540 YVLKPATEGKQRLKLAQFDYGRKCSEVARL-----------TEGMSGREIAQLAVSWQAT 588
Query: 474 VYGSENCVLDPSLFREVVDYKVAEHQQRRK-LAAAGGG 510
Y SE+ VL ++ V V +HQQ+ L A G G
Sbjct: 589 AYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEGPG 626
>sp|Q925I1|ATAD3_MOUSE ATPase family AAA domain-containing protein 3 OS=Mus musculus
GN=Atad3 PE=1 SV=1
Length = 591
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/448 (40%), Positives = 260/448 (58%), Gaps = 35/448 (7%)
Query: 58 NQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEA 117
N+E ++ QEES + E RRAT ERE E+ + +R AEA RA
Sbjct: 151 NEENLRKQEESVQKQEAIRRAT----------VERE-MELRHKNEMLRVEAEARARAKAD 199
Query: 118 KLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKLVVAVGGATALAAG 177
+ D+ R + +A R+ + +I T +G G RA +TD +K+ V G T LA G
Sbjct: 200 RENADIIREQIRLKAAEHRQTILESIRTAGTLLGEGFRAFVTDWDKVTATVAGLTLLAVG 259
Query: 178 IYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGG---DKELASKN 234
+Y+ + V Y++ LG+PSL+RE+SR L++LR + L S+
Sbjct: 260 VYSAKNATSVAGRYIEARLGKPSLVRETSRIS---------VLEALRHPIQVSRRLVSRP 310
Query: 235 GNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGL 294
+ VIL PSL+ R+R ++ AT NTK + + +RN+L YGPPGTGKT+ A++LA SG+
Sbjct: 311 QDALEGVILSPSLEARVRDIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGM 370
Query: 295 DYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRS 354
DYA+MTGGDVAP+G + VT +H++FDWA S+RGLLLF+DEADAFL +R +SE R+
Sbjct: 371 DYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRA 430
Query: 355 ALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LNA L RTG S +L LA+N+P D A+ DRIDE++ F LP +EER +L+++Y DK
Sbjct: 431 TLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDEMVCFALPQREERERLVRMYFDK 490
Query: 415 YIAQAGSRKPGLVHRLFKSEQQKIEIKGLT-DDILMEAAAKTEGFSGREIAKLMASVQAA 473
Y+ + + +Q++++ E A TEG SGREIA+L + QA
Sbjct: 491 YVLKPATEG-----------KQRLKVAQFDYGKKCSEVAQLTEGMSGREIAQLAVAWQAM 539
Query: 474 VYGSENCVLDPSLFREVVDYKVAEHQQR 501
Y SE+ VL ++ V V +HQQ+
Sbjct: 540 AYSSEDGVLTEAMMDARVQDAVQQHQQK 567
>sp|A7YWC4|ATAD3_BOVIN ATPase family AAA domain-containing protein 3 OS=Bos taurus
GN=ATAD3 PE=2 SV=1
Length = 586
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/459 (40%), Positives = 262/459 (57%), Gaps = 39/459 (8%)
Query: 58 NQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEA 117
N+E ++ QEES + E RRAT ERE E+ + +R AEA RA
Sbjct: 151 NEENLRKQEESVQKQEALRRAT----------VERE-MELRHKNEMLRVEAEARARAKAE 199
Query: 118 KLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKLVVAVGGATALAAG 177
+ D+ R + +A R+ + +I T G G RA +TD +K+ V G T LA G
Sbjct: 200 RENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVG 259
Query: 178 IYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGG---DKELASKN 234
IY+ + V Y++ LG+PSL+RE+SR L++LR + L SK
Sbjct: 260 IYSAKNATSVAGRYIEARLGKPSLVRETSR---------ITVLEALRHPIQVSRRLLSKP 310
Query: 235 GNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGL 294
+ V+L PSL+ R+R ++ AT NTK + + +RN+L YGPPGTGKT+ A++LA SG+
Sbjct: 311 QDALEGVVLSPSLEARVRDIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGM 370
Query: 295 DYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRS 354
DYA+MTGGDVAP+G VT +H++FDWA S+RGLLLF+DEADAFL +R +SE R+
Sbjct: 371 DYAIMTGGDVAPMGRDGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRA 430
Query: 355 ALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LNA L RTG S +L LA+N+P D A+ DRIDE++ F LP +EER +L+++Y DK
Sbjct: 431 TLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDEMVSFELPQREERERLVRMYFDK 490
Query: 415 YI---AQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQ 471
Y+ A G ++ L F ++ EI L TEG SGREI++L + Q
Sbjct: 491 YVLKPATEGKQRLKLAQ--FDYGKKCSEIAQL-----------TEGMSGREISQLAVAWQ 537
Query: 472 AAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAAAGGG 510
A Y SE+ VL ++ V + +H+Q+ + A G
Sbjct: 538 AMAYASEDGVLTEAMMDARVQDAIQQHRQKMQWLKAEGS 576
>sp|Q3KRE0|ATAD3_RAT ATPase family AAA domain-containing protein 3 OS=Rattus norvegicus
GN=Atad3 PE=1 SV=1
Length = 591
Score = 292 bits (748), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 179/448 (39%), Positives = 258/448 (57%), Gaps = 35/448 (7%)
Query: 58 NQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEA 117
N+E ++ QEES + E RRAT ERE E+ + +R AEA RA
Sbjct: 151 NEENLRKQEESVQKQEAIRRAT----------VERE-MELRHKNEMLRVEAEARARAKAD 199
Query: 118 KLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKLVVAVGGATALAAG 177
+ D+ R + +A R+ + +I T G G RA +TD +K+ V G T LA G
Sbjct: 200 RENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVG 259
Query: 178 IYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGG---DKELASKN 234
+Y+ + V Y++ LG+PSL+RE+SR L++LR + L S+
Sbjct: 260 VYSAKNATSVAGRYIEARLGKPSLVRETSR---------ISVLEALRHPIQVSRRLVSRP 310
Query: 235 GNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGL 294
+ VIL PSL+ R+R ++ AT NTK + + +RN+L YGPPGTGKT+ A++LA SG+
Sbjct: 311 QDALEGVILSPSLEARVRDIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGM 370
Query: 295 DYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRS 354
DYA+MTGGDVAP+G + VT +H++FDWA S+RGLLLF+DEADAFL +R +SE R+
Sbjct: 371 DYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRA 430
Query: 355 ALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LNA L RTG S +L LA+N+P D A+ DRIDE++ F LP +EER +L+++Y DK
Sbjct: 431 TLNAFLHRTGQHSNKFMLVLASNQPEQFDWAINDRIDEMVCFALPQREERERLVRMYFDK 490
Query: 415 YIAQAGSRKPGLVHRLFKSEQQKIEIKGLT-DDILMEAAAKTEGFSGREIAKLMASVQAA 473
Y+ + + +Q++++ E A T G SGREIA+L + QA
Sbjct: 491 YVLKPATEG-----------KQRLKVAQFDYGKKCSEVAQLTAGMSGREIAQLAVAWQAM 539
Query: 474 VYGSENCVLDPSLFREVVDYKVAEHQQR 501
Y SE+ VL ++ V V +HQQ+
Sbjct: 540 AYSSEDGVLTEAMMDARVQDAVQQHQQK 567
>sp|Q5T9A4|ATD3B_HUMAN ATPase family AAA domain-containing protein 3B OS=Homo sapiens
GN=ATAD3B PE=1 SV=1
Length = 648
Score = 285 bits (728), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 179/460 (38%), Positives = 260/460 (56%), Gaps = 40/460 (8%)
Query: 58 NQELVKMQEESSIRLEQARRATEEQIQAQKRQTEREKAEIERETIRVRAMAEAEGRAHEA 117
N+E ++ QEES + E RRAT E+ + + E + E E R RA AE E
Sbjct: 152 NEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVETE---ARARAKAEREN----- 203
Query: 118 KLAEDVNRRMLVDRANAEREKWIAAINTTFDHIGGGLRAILTDQNKLVVAVGGATALAAG 177
D+ R + +A+ R+ + +I T G G RA +TD++K+ V G T LA G
Sbjct: 204 ---ADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVTDRDKVTATVAGLTLLAVG 260
Query: 178 IYTTREGAKVIWGYVDRILGQPSLIRESSRGKYPWSGLFSRTLKSLRGG---DKELASKN 234
+Y+ + V +++ LG+PSL+RE+SR L++LR + L S+
Sbjct: 261 VYSAKNATAVTGRFIEARLGKPSLVRETSR---------ITVLEALRHPIQVSRRLLSRP 311
Query: 235 GNGFGDVILHPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGL 294
+ V+L PSL+ R+R ++ AT NTK + +R++L YGPPGTGKT+ A++LA SG+
Sbjct: 312 QDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGM 371
Query: 295 DYALMTGGDVAPLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRS 354
DYA+MTGGDVAP+G + VT +H+LFDWA S+RGLLLF+DEADAFL +R +S+ R+
Sbjct: 372 DYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKDLRA 431
Query: 355 ALNALLFRTGDQSKDIVLALATNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LNA L+ G S +L LA+N P D A+ RID ++ F LP QEER +L++L+ D
Sbjct: 432 TLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLVRLHFDN 491
Query: 415 YI---AQAGSRKPGLVHRLFKSEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQ 471
+ A G R+ L F ++ E+ L TEG SGREIA+L S Q
Sbjct: 492 CVLKPATEGKRRLKLAQ--FDYGRKCSEVARL-----------TEGMSGREIAQLAVSWQ 538
Query: 472 AAVYGSENCVLDPSLFREVVDYKVAEHQQR-RKLAAAGGG 510
A Y S++ VL ++ V V +++Q+ R L A G G
Sbjct: 539 ATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPG 578
>sp|Q5T2N8|ATD3C_HUMAN ATPase family AAA domain-containing protein 3C OS=Homo sapiens
GN=ATAD3C PE=2 SV=2
Length = 411
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 218/368 (59%), Gaps = 32/368 (8%)
Query: 140 IAAINTTFDHIGGGLRAILTDQNKLVVAVGGATALAAGIYTTREGAKVIWGYVDRILGQP 199
I A T F G G RA +TD++K+ V G T LA G+Y+ + V Y++ LG+P
Sbjct: 50 IRAAGTLF---GEGFRAFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRYIEARLGKP 106
Query: 200 SLIRESSRGKYPWSGLFSRTLKSLRGG----DKELASKNGNGFGDVILHPSLQKRIRQLS 255
SL+RE+SR L++LR + L S+ + V+L PSL+ R+R ++
Sbjct: 107 SLVRETSR---------ITVLEALRHPIQQVSRRLLSRPQDVLEGVVLSPSLEARVRDIA 157
Query: 256 GATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTKI 315
T N K + +R++L YGPPGTGKT+ A++LA SG+DYA+MTGGDVAP+G + VT +
Sbjct: 158 IMTRNIKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAM 217
Query: 316 HQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALA 375
H+LFDWA S+RGLLLF+DEADAFL +R +SE R+ LNA L+RTG S +L LA
Sbjct: 218 HKLFDWANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLILA 277
Query: 376 TNRPGDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYI---AQAGSRKPGLVHRLFK 432
+ P D A+ ID ++ F LPGQEER +L+++YL++Y+ A G R+ L F
Sbjct: 278 SCHPEQFDWAINACIDVMVHFDLPGQEERARLVRMYLNEYVLKPATEGKRRLKLAQ--FD 335
Query: 433 SEQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVD 492
++ +EI L TEG S R+IA+L S QA Y S++ VL ++ V
Sbjct: 336 YGRKCLEIARL-----------TEGMSCRKIAQLAVSWQATAYASKDGVLTEAMMDACVQ 384
Query: 493 YKVAEHQQ 500
V +HQQ
Sbjct: 385 DFVQQHQQ 392
>sp|Q58889|PRS2_METJA Putative 26S protease regulatory subunit homolog MJ1494
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1494
PE=3 SV=2
Length = 371
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 121/264 (45%), Gaps = 39/264 (14%)
Query: 210 YPWSG--LFSRTLKSLRGGDKELASKNGNG-FGDVILHPSLQKRIRQLSGATANTKAHN- 265
YP G + S T+ L+ K L ++ F ++I +K+ R + N K
Sbjct: 92 YPKEGGMITSETVFKLQTPKKVLRTQFKKAKFSEIIGQEEAKKKCRIIMKYLENPKLFGE 151
Query: 266 -APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQ---AVTKIHQLFDW 321
AP +N+LFYGPPGTGKT+ AR LA ++ + L+ ++ +G A I +L+
Sbjct: 152 WAP-KNVLFYGPPGTGKTLMARALATETNSSFILVKAPEL--IGEHVGDASKMIRELYQR 208
Query: 322 AKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRP 379
A +S ++FIDE DA R + +NALL +++ +V ATN P
Sbjct: 209 ASESA-PCIVFIDELDAIGLSREYQSLRGDVSEVVNALLTELDGIKENEGVVTIAATNNP 267
Query: 380 GDLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIE 439
LD A+ R +E +EF LP EER K+++LY K +
Sbjct: 268 AMLDPAIRSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKAN----------------- 310
Query: 440 IKGLTDDILMEAAAKTEGFSGREI 463
L E KT+GFSGR+I
Sbjct: 311 --------LKEFVEKTKGFSGRDI 326
>sp|A9KIG5|FTSH_CLOPH ATP-dependent zinc metalloprotease FtsH OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=ftsH PE=3 SV=1
Length = 577
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 39/216 (18%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSK 326
+ ++ YGPPGTGKT+ A+ +A ++G+ + M+G D + G A ++I LF+ AKKS+
Sbjct: 180 KGVMLYGPPGTGKTLIAKAIATEAGVPFYAMSGSDFVQMYVGVGA-SRIRTLFNKAKKSE 238
Query: 327 RGLLLFIDEADAFLCERNK-TYMSEAQRS-ALNALLFRTG--DQSKDIVLALATNRPGDL 382
+ ++FIDE DA +R + T S +R LNALL ++K IV+ ATNR L
Sbjct: 239 KA-VIFIDEIDAIGKKRARSTSASNDERDQTLNALLTEMSGFHENKGIVVIGATNRLDTL 297
Query: 383 DSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEI 440
D A+ R D +E LP R K+LKLY G +KP
Sbjct: 298 DEALLRPGRFDRQIEVGLPDILARKKILKLY--------GDKKP---------------- 333
Query: 441 KGLTDDILMEAAAK-TEGFSGREIAKLM--ASVQAA 473
L DD+ +E AK T FSG + L+ A++QAA
Sbjct: 334 --LGDDVDLEVLAKNTVSFSGAMLENLLNEAAIQAA 367
>sp|Q9P7J5|YJNA_SCHPO Uncharacterized AAA domain-containing protein C24B10.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC24B10.10c PE=3 SV=1
Length = 355
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 8/165 (4%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKKSK 326
+ +L YGPPG GKTM A+ LA++S + ++ G + G ++ + LF A+K +
Sbjct: 126 KGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFG-ESNKLVDALFTLARKLE 184
Query: 327 RGLLLFIDEADAFLCERNKT---YMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLD 383
++ FIDE D FL +R +T M++ + ++ QS+ +VL ATNRP D+D
Sbjct: 185 PTII-FIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSRVLVLG-ATNRPADID 242
Query: 384 SAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVH 428
A+ R+ +V PLP E+R K+L+LYL K +A G+V+
Sbjct: 243 EAIRRRMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVN 287
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 53/244 (21%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQAVTK--------IHQL 318
P + +L +GPPGTGKT+ A+ +A +SG ++ ++ GP+ +K I ++
Sbjct: 485 PPKGVLLFGPPGTGKTLLAKAVANESGANF-------ISVKGPEIFSKWVGESEKAIREI 537
Query: 319 FDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALAT 376
F A++S ++F DE DA +R + S +N LL ++ KD+V+ AT
Sbjct: 538 FRKARQSA-PCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAAT 596
Query: 377 NRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSE 434
NRP +D A+ R+D V+ P+P ++ R + K++
Sbjct: 597 NRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSM------------------- 637
Query: 435 QQKIEIKGLTDDI-LMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDP----SLFRE 489
L +D+ L E A KTEG++G +I L +AA+ + P RE
Sbjct: 638 -------NLAEDVNLEELAKKTEGYTGADIEALCR--EAAMLAVRESIGKPWDIEVKLRE 688
Query: 490 VVDY 493
+++Y
Sbjct: 689 LINY 692
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L GPPGTGKT+ A+ +A ++G ++ ++ G ++ +G + + ++F+ A++
Sbjct: 212 PPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVG-ETEENLRKIFEEAEE 270
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPGDLD 383
+ ++FIDE DA +R++ +R L G + + +V+ ATNRP LD
Sbjct: 271 NAPS-IIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALD 329
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D + +P +E R ++L+++
Sbjct: 330 PALRRPGRFDREIVIGVPDREGRKEILQIH 359
>sp|A3CV35|PAN_METMJ Proteasome-activating nucleotidase OS=Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1
Length = 412
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
+P + +L YGPPGTGKT+ AR +A ++ + + G ++ +G + + +LFD AK
Sbjct: 185 SPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIG-EGARLVRELFDLAK 243
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRP 379
+ ++FIDE DA RN + S E QR+ + L G D D+ + ATNR
Sbjct: 244 QRAPS-IIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRI 302
Query: 380 GDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R D ++E PLP + R +LK++
Sbjct: 303 DILDRALLRPGRFDRMIEIPLPDHQGRLAILKIH 336
>sp|A6UQT3|PAN_METVS Proteasome-activating nucleotidase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1
Length = 407
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 221 KSLRGGDKELASKNGNGFGDVILHPSLQKRIRQ--------LSGATANTKAHNAPFRNML 272
K R EL K FGD+ L +IR L K P + +L
Sbjct: 130 KDYRAMAMELEEKPDILFGDI---GGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVL 186
Query: 273 FYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFDWAKKSKRGLLL 331
YGPPGTGKT+ A+ +AR++ + + G + V + + +F AK+ K ++
Sbjct: 187 LYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKE-KSPCII 245
Query: 332 FIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPGDLDSAV- 386
FIDE DA +R ++ E QR+ + L G D D+ + ATNRP LD A+
Sbjct: 246 FIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAIL 305
Query: 387 -ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
R D ++E P ++ R ++ K++ DK
Sbjct: 306 RPGRFDRIIEIAAPDEDGRLEIFKIHTDK 334
>sp|O27092|PRS2_METTH Putative 26S protease regulatory subunit homolog MTH_1011
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=MTH_1011 PE=3 SV=1
Length = 372
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 13/172 (7%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQA---VTKIHQLFDWA 322
AP RN+LF+G PGTGKTM A+ LA + + L+ + +G +IH+L++ A
Sbjct: 156 AP-RNVLFHGSPGTGKTMLAKSLANELKVPLYLIKATSL--IGEHVGDGARQIHELYELA 212
Query: 323 KKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPG 380
K+ ++ FIDE DA +R + +NALL +Q+ +V ATN P
Sbjct: 213 SKTAPSVI-FIDEMDAIGLDRRYQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPE 271
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFK 432
LD A+ R +E +EF LP EER KL L+KYI + V +L K
Sbjct: 272 LLDKAIRSRFEEEIEFKLPDDEER----KLMLEKYIETMPLKVDFPVDKLVK 319
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei (strain
6A8) GN=pan PE=3 SV=1
Length = 436
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ A+ +A ++ + + G ++ +G + + +LFD AKK
Sbjct: 211 PPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIG-EGARLVRELFDLAKK 269
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
K ++FIDE DA R + S E QR+ + L G +++ D+ + ATNR
Sbjct: 270 -KAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRID 328
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R D ++E PLP +E R +LK++
Sbjct: 329 ILDKALLRPGRFDRIIEIPLPDEEGRLSILKVH 361
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 34/208 (16%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G +V + + ++ + + + F+ A+K+
Sbjct: 247 PPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKN 306
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++FIDE D+ +R+KT E +R ++ LL G +++ ++V+ ATNRP +D
Sbjct: 307 APA-IIFIDEIDSIAPKRDKTN-GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSID 364
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIK 441
A+ R D ++ +P R ++L+++ ++ K
Sbjct: 365 PALRRFGRFDREVDIGIPDATGRLEVLRIH---------------------TKNMK---- 399
Query: 442 GLTDDILMEA-AAKTEGFSGREIAKLMA 468
L DD+ +EA AA+T G+ G +IA L +
Sbjct: 400 -LADDVDLEALAAETHGYVGADIASLCS 426
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 261 TKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLF 319
TK +P + +LFYGPPGTGKT+ A+ +A + ++ + G ++ + ++ + I +F
Sbjct: 514 TKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 573
Query: 320 DWAKKSKRGLLLFIDEADAFLCERNKTYMSE--AQRSALNALLFRTG--DQSKDIVLALA 375
D A+ + ++F+DE D+ R + A +N LL + K++ + A
Sbjct: 574 DKARAAA-PTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGA 632
Query: 376 TNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKS 433
TNRP +D A+ R+D+++ PLP + R +L L K +PGL
Sbjct: 633 TNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKT-----PLEPGLE------ 681
Query: 434 EQQKIEIKGLTDDILMEAAAKTEGFSGREIAKLMASVQ-AAVYGSENCV 481
L A T+GFSG A L+ VQ AA Y ++ +
Sbjct: 682 --------------LTAIAKATQGFSG---ADLLYIVQRAAKYAIKDSI 713
>sp|P42811|PRS2_METTM Putative 26S protease regulatory subunit homolog MTBMA_c13930
OS=Methanothermobacter marburgensis (strain DSM 2133 /
14651 / NBRC 100331 / OCM 82 / Marburg) GN=MTBMA_c13930
PE=3 SV=1
Length = 372
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 13/156 (8%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLGPQA---VTKIHQLFDWA 322
AP RN+LF+G PGTGKTM A+ LA + + L+ + +G +IH+L++ A
Sbjct: 156 AP-RNVLFHGSPGTGKTMLAKSLANELRVPLYLIKATSL--IGEHVGDGARQIHELYELA 212
Query: 323 KKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPG 380
K+ ++ FIDE DA +R + +NALL +Q+ +V ATN P
Sbjct: 213 SKTAPSVI-FIDEMDAIGLDRRFQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPE 271
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYI 416
LD+A+ R +E +EF LPG +ER ++ L+KYI
Sbjct: 272 LLDNAIRSRFEEEIEFKLPGDDER----RMMLEKYI 303
>sp|Q6LWR0|PAN_METMP Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain S2 / LL) GN=pan PE=3 SV=1
Length = 407
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFD 320
K P + +L YGPPGTGKT+ A+ +A ++ + + G + V + + +F
Sbjct: 176 KVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK 235
Query: 321 WAKKSKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALAT 376
AK+ K ++FIDE DA +R ++ E QR+ + L G D D+ + AT
Sbjct: 236 LAKE-KSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAAT 294
Query: 377 NRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
NRP LD A+ R D ++E +P ++ R ++LK++ +K
Sbjct: 295 NRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEK 334
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFD 320
K P + +L YGPPGTGKT+ A+ +A ++ + + G + V + + +F
Sbjct: 176 KVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK 235
Query: 321 WAKKSKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALAT 376
AK+ K ++FIDE DA +R ++ E QR+ + L G D D+ + AT
Sbjct: 236 LAKE-KSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAAT 294
Query: 377 NRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
NRP LD A+ R D ++E +P ++ R ++LK++ +K
Sbjct: 295 NRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEK 334
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 19/173 (10%)
Query: 244 HPSLQKRIRQLSGATANTKAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD 303
HPSL K I G P R +L YGPPGTGKT+ AR +A ++G + L+ G +
Sbjct: 223 HPSLFKAI----GVK--------PPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPE 270
Query: 304 V-APLGPQAVTKIHQLFDWAKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNAL--L 360
+ + L ++ + + + F+ A+K+ ++FIDE DA +R+KT+ E +R ++ L L
Sbjct: 271 IMSKLAGESESNLRKAFEEAEKNSPA-IIFIDEIDAIAPKRDKTH-GEVERRIVSQLLTL 328
Query: 361 FRTGDQSKDIVLALATNRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
+S +++ ATNRP +D A+ R D ++ +P R ++L+++
Sbjct: 329 MDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIH 381
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKKS 325
P R +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + +FD A +S
Sbjct: 507 PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKA-RS 565
Query: 326 KRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQ--SKDIVLALATNRPGD 381
+LF DE D+ R N A +N +L K++ + ATNRP
Sbjct: 566 AAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDI 625
Query: 382 LDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP + R +LK L K
Sbjct: 626 IDPAILRPGRLDQLIYIPLPDDKSREAILKANLRK 660
>sp|A9A916|PAN_METM6 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1
Length = 407
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFD 320
K P + +L YGPPGTGKT+ A+ +A ++ + + G + V + + +F
Sbjct: 176 KVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK 235
Query: 321 WAKKSKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALAT 376
AK+ K ++FIDE DA +R ++ E QR+ + L G D D+ + AT
Sbjct: 236 LAKE-KSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAAT 294
Query: 377 NRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
NRP LD A+ R D ++E +P ++ R +LK++ +K
Sbjct: 295 NRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEK 334
>sp|A4G0S4|PAN_METM5 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1
Length = 407
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 262 KAHNAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFD 320
K P + +L YGPPGTGKT+ A+ +A ++ + + G + V + + +F
Sbjct: 176 KVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK 235
Query: 321 WAKKSKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALAT 376
AK+ K ++FIDE DA +R ++ E QR+ + L G D D+ + AT
Sbjct: 236 LAKE-KSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAAT 294
Query: 377 NRPGDLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
NRP LD A+ R D ++E +P ++ R +LK++ +K
Sbjct: 295 NRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEK 334
>sp|P32795|YME1_YEAST Mitochondrial inner membrane i-AAA protease supercomplex subunit
YME1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=YME1 PE=1 SV=1
Length = 747
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGG--DVAPLGPQAVTKIHQLFDWAKKSK 326
+ +L GPPGTGKT+ AR A ++G+D+ M+G D +G A +I LF A +S+
Sbjct: 315 KGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGA-KRIRDLFAQA-RSR 372
Query: 327 RGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLDS 384
++FIDE DA +RN + A+++ LN LL Q+ I++ ATN P LD
Sbjct: 373 APAIIFIDELDAIGGKRNPKDQAYAKQT-LNQLLVELDGFSQTSGIIIIGATNFPEALDK 431
Query: 385 AVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKG 442
A+ R D+V+ LP R +LK ++ K I A + P ++ R
Sbjct: 432 ALTRPGRFDKVVNVDLPDVRGRADILKHHMKK-ITLADNVDPTIIAR------------- 477
Query: 443 LTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSE 478
T G SG E+A L+ QAAVY +
Sbjct: 478 -----------GTPGLSGAELANLVN--QAAVYACQ 500
>sp|Q8PY58|PAN_METMA Proteasome-activating nucleotidase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=pan PE=3 SV=1
Length = 420
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YG PGTGKT+ A+ +A ++ + + G ++ +G + ++F+ A+K
Sbjct: 192 PPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIG-DGSKLVREIFEMARK 250
Query: 325 SKRGLLLFIDEADAFLCER-NKTYMS--EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
K ++FIDE D+ R N+T + E QR+ + L G D+ K+I + ATNRP
Sbjct: 251 -KAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPD 309
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R D ++ P+PG E R K+LK++ +K
Sbjct: 310 VLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEK 345
>sp|Q2FQ56|PAN_METHJ Proteasome-activating nucleotidase OS=Methanospirillum hungatei
(strain JF-1 / DSM 864) GN=pan PE=3 SV=1
Length = 412
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 37/251 (14%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPGTGKT+ A+ +A ++ + G ++ +G + + +LFD AK+
Sbjct: 186 PPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIG-EGARLVRELFDLAKE 244
Query: 325 SKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTGDQSK-DIVLALATNRPG 380
K ++FIDE DA R + S E QR+ + L G + + D+ + ATNR
Sbjct: 245 -KAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRID 303
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKI 438
LD+A+ R D ++E PLP E R+ +LK++
Sbjct: 304 ILDAALLRPGRFDRIIEIPLPDTEGRYSILKVH--------------------------T 337
Query: 439 EIKGLTDDI-LMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAE 497
L++D+ LME A TEG +G E+ + E+ +D F ++ +
Sbjct: 338 RCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKEHPQVDQEDFLTALNKFRCD 397
Query: 498 HQQRRKLAAAG 508
++ +L AG
Sbjct: 398 FERDHRLTTAG 408
>sp|Q5ZK92|SPAST_CHICK Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1
Length = 613
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 370 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFAVAR 428
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQS--KDIVLAL-ATNRPG 380
+ + ++ FIDE D+ LCER + ++R L+ G QS +D +L + ATNRP
Sbjct: 429 ELQPSII-FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQ 487
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEI 440
+LD AV R + + LP +E R LLK L K GS
Sbjct: 488 ELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQ----GS------------------- 524
Query: 441 KGLTDDILMEAAAKTEGFSGREIAKLM 467
LT L + A T+G+SG ++ L+
Sbjct: 525 -PLTQKELAQLARMTDGYSGSDLTALV 550
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 34/208 (16%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F+ A+K+
Sbjct: 257 PPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 316
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALL-FRTGDQSK-DIVLALATNRPGDLD 383
++FIDE D+ +R KT E +R ++ LL G +++ ++V+ ATNRP +D
Sbjct: 317 SPA-IIFIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSID 374
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIK 441
A+ R D ++ +P R ++L+++ ++ K
Sbjct: 375 PALRRFGRFDREVDVGIPDPTGRLEILRIH---------------------TKNMK---- 409
Query: 442 GLTDDILME-AAAKTEGFSGREIAKLMA 468
L DD+ +E AA+T G+ G ++A L +
Sbjct: 410 -LADDVDLEQIAAETHGYVGSDLASLCS 436
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 37/216 (17%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LF+GPPGTGKT+ A+ +A + ++ + G ++ + ++ + + +FD A+
Sbjct: 529 TPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARA 588
Query: 325 SKRGLLLFIDEADAFLCERNKTYMSEAQRS-ALNALLFRTG--DQSKDIVLALATNRPGD 381
+ ++F+DE D+ R + +N LL + K++ + ATNRP
Sbjct: 589 AA-PCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQ 647
Query: 382 LDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIE 439
+D A+ R+D+++ PLP +E RF +L Q ++
Sbjct: 648 IDPALMRPGRLDQLIYVPLPDEEARFSIL--------------------------QTQLR 681
Query: 440 IKGLTDDILMEAAAK-TEGFSGREIAKLMASVQAAV 474
+ +D+ + A AK T GFSG A L VQ AV
Sbjct: 682 HTPVAEDVDLRAVAKATHGFSG---ADLEFVVQRAV 714
>sp|Q6AZT2|SPAST_XENLA Spastin OS=Xenopus laevis GN=spast PE=2 SV=1
Length = 600
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 31/206 (15%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP R +L +GPPG GKTM A+ +A +S + ++ + +G + + LF A+
Sbjct: 357 APARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVG-EGEKLVRALFSVAR 415
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQS--KDIVLAL-ATNRPG 380
+ + ++FIDE D+ LCER + ++R L+ G QS D VL + ATNRP
Sbjct: 416 ELQPS-IIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQ 474
Query: 381 DLDSAVADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEI 440
+LD AV R + + LP +E R LLK L K +
Sbjct: 475 ELDDAVLRRFTKRVYVALPNEETRLVLLKNLLSK------------------------QG 510
Query: 441 KGLTDDILMEAAAKTEGFSGREIAKL 466
L++ L + + TEG+SG +I L
Sbjct: 511 NPLSEKELTQLSRLTEGYSGSDITAL 536
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA +R KT+ E +R ++ LL Q +++ ATNRP +D
Sbjct: 297 APA-IIFIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDSTGRLEILQIH 384
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
Query: 325 SKRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ +LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 569 AA-PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPD 627
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRK 663
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA +R KT+ E +R ++ LL Q +++ ATNRP +D
Sbjct: 297 APA-IIFIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDSTGRLEILQIH 384
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
Query: 325 SKRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ +LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 569 AA-PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK 663
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate
3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 34/211 (16%)
Query: 271 MLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKKSKRGL 329
+L YGPPG GKT+ A+ +A + ++ + G ++ + ++ + LFD A ++
Sbjct: 971 ILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKA-RAASPC 1029
Query: 330 LLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLDSAVA 387
++F DE D+ ERN ++A +N +L ++ K I + ATNRP LD A+
Sbjct: 1030 IIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALT 1089
Query: 388 --DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIKGLTD 445
R+D+++ LP + R+ + K L P L +
Sbjct: 1090 RPGRLDKLIYISLPDLKSRYSIFKAIL--------KNTP------------------LNE 1123
Query: 446 DI-LMEAAAKTEGFSGREIAKLMAS-VQAAV 474
D+ + + A +TEGFSG +I L S V A+
Sbjct: 1124 DVDIHDMAKRTEGFSGADITNLCQSAVNEAI 1154
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAK 323
AP + +L +G PGTGKT A+ +A +S ++ G ++ +G ++ K+ ++F A
Sbjct: 560 AP-KGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIG-ESEQKLRKIFKKAS 617
Query: 324 KSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLAL-ATNRPGDL 382
+ K ++FIDE D+ +R+K+ +R L G + + VL L ATNRP +
Sbjct: 618 E-KTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSI 676
Query: 383 DSAV--ADRIDEVLEFPLPGQEERFKLL 408
D A+ R D +E P+P ++ R+++L
Sbjct: 677 DPALRRFGRFDREIEIPVPDEQGRYEIL 704
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPGTGKT+ A+ +A ++ + + G + V + + + +F AK+
Sbjct: 203 PPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKE- 261
Query: 326 KRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
K ++FIDE DA +R E QR+ + L G D D+ + ATNRP
Sbjct: 262 KAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDI 321
Query: 382 LDSAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R D ++E P P ++ R ++LK++
Sbjct: 322 LDPAILRPGRFDRIIEVPAPDEKGRLEILKIH 353
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPG GKT+ A+ LA + + + G + V + +H+LF+ AK+
Sbjct: 172 PPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKE- 230
Query: 326 KRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPGD 381
K ++FIDE DA +R E R+ + L G D S ++ + ATNRP
Sbjct: 231 KAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDI 290
Query: 382 LDSAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R D ++E PLP + R ++LK++
Sbjct: 291 LDPALLRPGRFDRLIEVPLPNFKSRLEILKIH 322
>sp|B2JVU2|FTSH_BURP8 ATP-dependent zinc metalloprotease FtsH OS=Burkholderia phymatum
(strain DSM 17167 / STM815) GN=ftsH PE=3 SV=1
Length = 645
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 39/247 (15%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFDWAKKSKR 327
+ +L GPPGTGKT+ AR +A ++G+ + ++G + V ++ LF+ A+K
Sbjct: 193 KGVLLVGPPGTGKTLLARAVAGEAGVAFFSISGSEFVEMFVGVGAARVRDLFEQARKHAP 252
Query: 328 GLLLFIDEADAFLCERNKTYMS----EAQRSALNALLFRTG--DQSKDIVLALATNRPGD 381
++FIDE D+ R + + + LN LL D S +VL ATNRP
Sbjct: 253 A-IVFIDELDSLGRARGSAFPGGGGHDEKEQTLNQLLAELDGFDTSIGVVLLAATNRPEI 311
Query: 382 LDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIE 439
LD A+ A R D + P ++ R ++L+++L K IA A PG+
Sbjct: 312 LDPALLRAGRFDRQVLVDRPDKKGRAQILEVHLKK-IALA----PGVP------------ 354
Query: 440 IKGLTDDILMEAAAKTEGFSGREIAKLM--ASVQAAVYGSENCVLDPSLFREVVDYKVAE 497
DDI AA T GFSG ++A L+ A++ A +EN LD F + ++ VA
Sbjct: 355 ----VDDI----AALTPGFSGADLANLVNEAAILATRRHAENVSLDD--FTQAIERIVAG 404
Query: 498 HQQRRKL 504
++R +L
Sbjct: 405 LEKRNRL 411
>sp|Q8TI88|PAN_METAC Proteasome-activating nucleotidase OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=pan
PE=3 SV=2
Length = 421
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YG PGTGKT+ A+ +A ++ + + G ++ +G + ++F+ A+K
Sbjct: 192 PPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIG-DGSKLVREIFEMARK 250
Query: 325 SKRGLLLFIDEADAFLCER-NKTYMS--EAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
K ++FIDE D+ R N+T + E QR+ + L G D+ K+I + ATNRP
Sbjct: 251 -KAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPD 309
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD A+ R D ++ P+PG E R K+LK++ K
Sbjct: 310 VLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGK 345
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA +R KT+ E +R ++ LL Q +++ ATNRP +D
Sbjct: 297 APA-IIFIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
Query: 325 SKRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ +LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 569 AA-PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
>sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2
Length = 717
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 42/225 (18%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL--GPQAVTKIHQLFDWAKKSK 326
+ +L GPPGTGKTM AR +A ++G+ + +G + + G A ++ LF AKK
Sbjct: 261 KGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGA-RRVRDLFSAAKKCS 319
Query: 327 RGLLLFIDEADAFLCERN---KTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGD 381
++FIDE DA RN + YM + LN +L Q++ I++ ATN P
Sbjct: 320 -PCIIFIDEIDAIGGSRNPKDQQYM----KMTLNQMLVELDGFKQNEGIIVVAATNFPES 374
Query: 382 LDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIE 439
LD A+ R D + P P E R ++L+ ++ K + K+E
Sbjct: 375 LDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSK---------------VLKAE----- 414
Query: 440 IKGLTDDILMEAAAKTEGFSGREIAKL--MASVQAAVYGSENCVL 482
D LM A T GFSG ++A L +A+++AA+ GS++ +
Sbjct: 415 -----DVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTM 454
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA +R KT+ E +R ++ LL Q +++ ATNRP +D
Sbjct: 297 APA-IIFIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
Query: 325 SKRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ +LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 569 AA-PCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPD 627
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK 663
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA +R KT+ E +R ++ LL Q +++ ATNRP +D
Sbjct: 297 APA-IIFIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
Query: 325 SKRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ +LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 569 AA-PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA +R KT+ E +R ++ LL Q +++ ATNRP +D
Sbjct: 297 APA-IIFIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
Query: 325 SKRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ +LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 569 AA-PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA +R KT+ E +R ++ LL Q +++ ATNRP +D
Sbjct: 297 APA-IIFIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
Query: 325 SKRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ +LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 569 AA-PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ A+K+
Sbjct: 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 296
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA +R KT+ E +R ++ LL Q +++ ATNRP +D
Sbjct: 297 APA-IIFIDELDAIAPKREKTH-GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSID 354
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L+++
Sbjct: 355 PALRRFGRFDREVDIGIPDATGRLEILQIH 384
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 509 TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 568
Query: 325 SKRGLLLFIDEADAFLCER--NKTYMSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ +LF DE D+ R N A +N +L S K++ + ATNRP
Sbjct: 569 AA-PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDK 414
+D A+ R+D+++ PLP ++ R +LK L K
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
>sp|D0MGU8|FTSH_RHOM4 ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=ftsH PE=3 SV=1
Length = 697
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 40/249 (16%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFDWAKKSKR 327
+ +L GPPGTGKT+ A+ +A ++G+ + ++G D V ++ LF AK+ K
Sbjct: 245 KGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFRQAKE-KA 303
Query: 328 GLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG--DQSKDIVLALATNRPGDL 382
++FIDE DA R + M ++ + + LN LL + K +++ ATNRP L
Sbjct: 304 PCIIFIDEIDAIGRSRGRGIMMGANDERENTLNQLLVEMDGFNTDKGVIIMAATNRPDVL 363
Query: 383 DSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEI 440
D A+ R D + P + ER ++ K++ I
Sbjct: 364 DPALLRPGRFDRQILIDKPDRRERLEIFKVHTRDLI------------------------ 399
Query: 441 KGLTDDILMEA-AAKTEGFSGREIAKLM--ASVQAAVYGSENCVLDPSLFREVVDYKVAE 497
L DD+ +E A +T GF+G EIA + A++ AA G E ++ F + +D +A
Sbjct: 400 --LGDDVDLEVLAGQTPGFAGAEIANVCNEAALLAARKGKEAVEMED--FEQAIDRVIAG 455
Query: 498 HQQRRKLAA 506
+++ K+ +
Sbjct: 456 LEKKNKIIS 464
>sp|Q83FV7|FTSH_TROWT ATP-dependent zinc metalloprotease FtsH OS=Tropheryma whipplei
(strain Twist) GN=ftsH PE=3 SV=1
Length = 666
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 33/243 (13%)
Query: 269 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGD-VAPLGPQAVTKIHQLFDWAKKSKR 327
+ +L +GPPGTGKT+ AR +A ++G+ + ++G D V +++ LF+ AK++
Sbjct: 196 KGVLLFGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSP 255
Query: 328 GLLLFIDEADAFLCERNKTYMS--EAQRSALNALLFRTG--DQSKDIVLALATNRPGDLD 383
++FIDE DA R + + + LN LL D +I+L ATNR LD
Sbjct: 256 S-IIFIDEIDAVGRRRGSGFGGGHDEREQTLNQLLVEMDGFDVKTNIILIAATNRSDVLD 314
Query: 384 SAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKIEIK 441
SA+ R D + P + R K+L+ VH K + ++++
Sbjct: 315 SALLRPGRFDRHVAIDAPNLQGRLKILQ-----------------VHARTKPVSKSVDLE 357
Query: 442 GLTDDILMEAAAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQR 501
L A KT GF+G ++A ++ S ++D E VD +A Q+R
Sbjct: 358 VL--------ARKTPGFTGADLANVLNEAALLTARSNAQIIDDRALDEAVDRVMAGPQRR 409
Query: 502 RKL 504
++
Sbjct: 410 SRV 412
>sp|Q9SSB4|PRS7B_ARATH 26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana
GN=RPT1B PE=2 SV=2
Length = 464
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAP--LGPQAVTKIHQLFDWAKK 324
P + +L YGPPG+GKT+ AR +A ++G + + G ++ +G + + +LF A +
Sbjct: 238 PPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIG-EGARMVRELFQMA-R 295
Query: 325 SKRGLLLFIDEADAFLCERNKTYM---SEAQRSALNALLFRTG-DQSKDIVLALATNRPG 380
SK+ +LF DE DA R + +E QR+ L L G D +I + +ATNRP
Sbjct: 296 SKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPD 355
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLY 411
LD A+ R+D +EF LP E R ++ K++
Sbjct: 356 ILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIH 388
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
+P + +LFYGPPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD A++
Sbjct: 513 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQ 572
Query: 325 SKRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRT-GDQSKDIVLAL-ATNRPG 380
S +LF DE D+ +R + A LN LL G +K V + ATNRP
Sbjct: 573 SA-PCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPD 631
Query: 381 DLDSAV--ADRIDEVLEFPLPGQEERFKLLKLYLDKYIAQAGSRKPGLVHRLFKSEQQKI 438
+D A+ R+D+++ PLP +E R+++ K L K
Sbjct: 632 IIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK------------------------ 667
Query: 439 EIKGLTDDILMEAAAK-TEGFSGREIAKL 466
+ D+ + A AK T+GFSG +I ++
Sbjct: 668 --SPVAKDVDLRALAKYTQGFSGADITEI 694
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P + +L YGPPG+GKT+ AR +A ++G + + G ++ + L ++ + + + F+ A+K+
Sbjct: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLAL-ATNRPGDLDS 384
++FIDE D+ +R KT+ +R L G +S+ V+ + ATNRP +D
Sbjct: 301 APS-IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP 359
Query: 385 AV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P + R ++L+++
Sbjct: 360 ALRRFGRFDREIDIGVPDEIGRLEVLRIH 388
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 84/149 (56%), Gaps = 5/149 (3%)
Query: 267 PFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGPQAVTKIHQLFDWAKKS 325
P R +L YGPPGTGKT+ AR +A ++G + L+ G ++ + + ++ + + + F+ A+K+
Sbjct: 258 PPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 317
Query: 326 KRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK-DIVLALATNRPGDLDS 384
++FIDE D+ +R KT +R L G +++ ++V+ ATNRP +D
Sbjct: 318 SPA-IIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDP 376
Query: 385 AV--ADRIDEVLEFPLPGQEERFKLLKLY 411
A+ R D ++ +P R ++L ++
Sbjct: 377 ALRRFGRFDREVDIGIPDPTGRLEILSIH 405
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 8/156 (5%)
Query: 266 APFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPL-GPQAVTKIHQLFDWAKK 324
+P R +LFYGPPGTGKTM A+ +A + ++ + G ++ + ++ + I +FD A+
Sbjct: 531 SPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARA 590
Query: 325 SKRGLLLFIDEADAFLCERNKTY--MSEAQRSALNALLFRTGDQS--KDIVLALATNRPG 380
+ ++F+DE D+ R + A +N LL + K++ + ATNRP
Sbjct: 591 AAP-CVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE 649
Query: 381 DLDSAVA--DRIDEVLEFPLPGQEERFKLLKLYLDK 414
LD+A+ R+D ++ PLP Q R +LK L K
Sbjct: 650 QLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRK 685
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,004,413
Number of Sequences: 539616
Number of extensions: 7551718
Number of successful extensions: 42744
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 1691
Number of HSP's that attempted gapping in prelim test: 37815
Number of HSP's gapped (non-prelim): 5270
length of query: 512
length of database: 191,569,459
effective HSP length: 122
effective length of query: 390
effective length of database: 125,736,307
effective search space: 49037159730
effective search space used: 49037159730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)