Query 010368
Match_columns 512
No_of_seqs 560 out of 4097
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 05:18:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 6.8E-39 2.3E-43 323.5 30.1 308 170-512 13-320 (323)
2 2qrd_G Protein C1556.08C; AMPK 100.0 7.8E-34 2.7E-38 287.8 32.8 305 171-511 6-314 (334)
3 2v8q_E 5'-AMP-activated protei 100.0 1.5E-33 5E-38 285.4 26.4 300 174-511 22-322 (330)
4 3kh5_A Protein MJ1225; AMPK, A 100.0 3.6E-31 1.2E-35 260.7 23.6 268 189-510 5-279 (280)
5 3ddj_A CBS domain-containing p 100.0 3E-30 1E-34 256.9 18.6 263 186-511 19-284 (296)
6 2yzq_A Putative uncharacterize 100.0 7E-28 2.4E-32 237.7 15.9 256 197-511 9-278 (282)
7 1z0n_A 5'-AMP-activated protei 99.9 1.3E-24 4.6E-29 178.3 10.8 88 21-112 6-93 (96)
8 2qlv_B Protein SIP2, protein S 99.9 3.2E-24 1.1E-28 205.8 11.1 90 24-113 2-91 (252)
9 3kh5_A Protein MJ1225; AMPK, A 99.9 1.7E-22 6E-27 198.5 18.6 195 286-511 9-204 (280)
10 3ddj_A CBS domain-containing p 99.9 3.6E-22 1.2E-26 198.4 13.5 192 283-511 22-213 (296)
11 3nme_A Ptpkis1 protein, SEX4 g 99.9 7.9E-22 2.7E-26 195.5 10.0 87 22-109 166-254 (294)
12 2v8q_E 5'-AMP-activated protei 99.9 6.1E-21 2.1E-25 192.6 15.7 207 284-511 38-250 (330)
13 3t4n_C Nuclear protein SNF4; C 99.8 1.9E-20 6.5E-25 188.3 15.8 202 288-511 39-247 (323)
14 2yzq_A Putative uncharacterize 99.8 2.2E-20 7.6E-25 183.8 10.2 173 286-507 6-179 (282)
15 2qrd_G Protein C1556.08C; AMPK 99.8 1.4E-19 4.9E-24 182.8 14.7 209 284-511 25-242 (334)
16 4esy_A CBS domain containing m 99.8 1.8E-19 6E-24 164.4 8.3 126 372-512 19-162 (170)
17 3i8n_A Uncharacterized protein 99.8 6.7E-18 2.3E-22 146.6 12.6 120 372-512 7-129 (130)
18 3nqr_A Magnesium and cobalt ef 99.7 3.8E-18 1.3E-22 147.6 8.5 119 373-512 5-126 (127)
19 3k6e_A CBS domain protein; str 99.7 6.5E-18 2.2E-22 152.0 10.0 117 379-511 25-141 (156)
20 3hf7_A Uncharacterized CBS-dom 99.7 1.1E-17 3.9E-22 145.4 11.1 121 373-512 4-127 (130)
21 3lv9_A Putative transporter; C 99.7 1.7E-17 5.7E-22 147.4 12.3 119 372-512 24-145 (148)
22 3kpb_A Uncharacterized protein 99.7 1.4E-17 4.6E-22 142.6 10.6 117 373-511 3-119 (122)
23 3jtf_A Magnesium and cobalt ef 99.7 8.5E-18 2.9E-22 145.8 7.9 117 373-512 7-126 (129)
24 3lhh_A CBS domain protein; str 99.7 6.4E-17 2.2E-21 147.7 13.8 119 372-512 43-164 (172)
25 1pbj_A Hypothetical protein; s 99.7 8.5E-17 2.9E-21 138.1 13.0 119 373-511 3-121 (125)
26 2rih_A Conserved protein with 99.7 4.7E-17 1.6E-21 143.2 11.2 121 370-510 4-126 (141)
27 3k2v_A Putative D-arabinose 5- 99.7 8.9E-17 3.1E-21 142.9 12.4 118 372-508 29-148 (149)
28 2nyc_A Nuclear protein SNF4; b 99.7 2E-16 6.7E-21 139.2 14.0 124 377-511 17-140 (144)
29 3fv6_A YQZB protein; CBS domai 99.7 1.1E-16 3.8E-21 144.0 12.6 121 372-511 18-143 (159)
30 2uv4_A 5'-AMP-activated protei 99.7 1.5E-16 5.1E-21 142.0 13.3 122 379-511 29-150 (152)
31 3gby_A Uncharacterized protein 99.7 3.3E-17 1.1E-21 141.8 8.6 120 372-511 6-125 (128)
32 3lfr_A Putative metal ION tran 99.7 1.5E-17 5E-22 145.8 6.5 120 373-512 5-127 (136)
33 2p9m_A Hypothetical protein MJ 99.7 2.3E-16 8E-21 137.9 13.8 121 372-511 9-135 (138)
34 4gqw_A CBS domain-containing p 99.7 8.1E-17 2.8E-21 142.9 10.9 126 372-511 6-142 (152)
35 1y5h_A Hypothetical protein RV 99.7 6E-17 2.1E-21 140.8 9.7 121 373-512 10-131 (133)
36 2o16_A Acetoin utilization pro 99.7 2.6E-16 8.8E-21 141.8 14.0 125 372-511 6-134 (160)
37 2yzi_A Hypothetical protein PH 99.7 2.5E-16 8.6E-21 137.8 13.3 120 372-511 8-128 (138)
38 3oco_A Hemolysin-like protein 99.7 7E-17 2.4E-21 144.3 9.4 117 374-512 23-143 (153)
39 2ef7_A Hypothetical protein ST 99.7 1.9E-16 6.5E-21 137.6 11.9 120 372-511 5-124 (133)
40 3ocm_A Putative membrane prote 99.7 3.1E-16 1.1E-20 143.4 13.5 118 372-512 37-157 (173)
41 3ctu_A CBS domain protein; str 99.7 9.3E-17 3.2E-21 143.8 9.8 122 374-511 18-141 (156)
42 2pfi_A Chloride channel protei 99.7 3.2E-16 1.1E-20 141.1 13.2 130 373-511 15-146 (164)
43 1o50_A CBS domain-containing p 99.7 4.8E-16 1.6E-20 139.4 13.5 124 372-511 17-152 (157)
44 3fhm_A Uncharacterized protein 99.7 1.8E-16 6E-21 143.6 10.2 121 373-511 26-149 (165)
45 3lqn_A CBS domain protein; csg 99.7 2.3E-16 7.9E-21 140.1 10.6 123 373-511 17-142 (150)
46 1pvm_A Conserved hypothetical 99.7 3.7E-16 1.3E-20 144.1 11.4 123 372-511 10-132 (184)
47 3sl7_A CBS domain-containing p 99.7 3.2E-16 1.1E-20 143.3 10.8 125 373-511 6-155 (180)
48 2emq_A Hypothetical conserved 99.7 7E-16 2.4E-20 138.0 12.4 124 372-511 12-138 (157)
49 2rc3_A CBS domain; in SITU pro 99.7 3.5E-16 1.2E-20 136.4 10.1 120 373-512 8-131 (135)
50 3l2b_A Probable manganase-depe 99.6 1.1E-15 3.8E-20 147.5 14.3 200 283-510 9-242 (245)
51 1yav_A Hypothetical protein BS 99.6 6E-16 2.1E-20 139.0 11.7 123 373-511 16-141 (159)
52 4fry_A Putative signal-transdu 99.6 5.5E-16 1.9E-20 138.9 11.3 121 372-511 8-134 (157)
53 3kxr_A Magnesium transporter, 99.6 1E-15 3.4E-20 143.9 11.6 116 372-511 55-173 (205)
54 1vr9_A CBS domain protein/ACT 99.6 1.4E-15 4.7E-20 143.9 12.5 158 283-492 15-172 (213)
55 3kxr_A Magnesium transporter, 99.6 2.1E-15 7.2E-20 141.7 13.6 162 235-430 11-175 (205)
56 3oi8_A Uncharacterized protein 99.6 5.9E-16 2E-20 138.8 8.7 114 372-507 39-155 (156)
57 1vr9_A CBS domain protein/ACT 99.6 7.4E-16 2.5E-20 145.7 9.3 121 367-511 9-129 (213)
58 2d4z_A Chloride channel protei 99.6 7.7E-15 2.6E-19 141.8 16.3 139 372-512 14-246 (250)
59 4esy_A CBS domain containing m 99.6 7E-16 2.4E-20 140.3 7.7 157 174-345 5-162 (170)
60 3lhh_A CBS domain protein; str 99.6 9.1E-15 3.1E-19 133.3 14.8 122 281-430 42-165 (172)
61 2j9l_A Chloride channel protei 99.6 2.6E-15 8.8E-20 138.0 10.7 124 373-511 13-164 (185)
62 3lv9_A Putative transporter; C 99.6 1.2E-14 4.1E-19 128.8 14.7 120 282-429 24-145 (148)
63 3kpb_A Uncharacterized protein 99.6 7.8E-15 2.7E-19 125.2 11.7 115 286-429 6-120 (122)
64 3k6e_A CBS domain protein; str 99.6 5.6E-15 1.9E-19 132.7 11.1 119 288-429 24-142 (156)
65 3i8n_A Uncharacterized protein 99.6 1.3E-14 4.4E-19 125.7 12.4 119 283-428 8-128 (130)
66 3hf7_A Uncharacterized CBS-dom 99.6 7.6E-15 2.6E-19 127.4 10.1 116 289-429 12-127 (130)
67 3jtf_A Magnesium and cobalt ef 99.6 9.4E-15 3.2E-19 126.5 10.7 115 286-429 10-126 (129)
68 3gby_A Uncharacterized protein 99.6 7.7E-15 2.6E-19 126.7 9.9 119 284-429 8-126 (128)
69 2ef7_A Hypothetical protein ST 99.6 2.3E-14 7.8E-19 124.3 12.9 121 283-430 6-126 (133)
70 2rih_A Conserved protein with 99.6 3.1E-14 1.1E-18 124.9 12.7 119 284-427 8-126 (141)
71 1pbj_A Hypothetical protein; s 99.5 1.9E-14 6.6E-19 123.2 10.9 118 286-430 6-123 (125)
72 2oux_A Magnesium transporter; 99.5 9.7E-15 3.3E-19 144.4 9.8 116 372-511 138-258 (286)
73 3lfr_A Putative metal ION tran 99.5 1E-14 3.5E-19 127.5 8.9 117 286-428 8-126 (136)
74 3nqr_A Magnesium and cobalt ef 99.5 9.8E-15 3.4E-19 125.9 8.2 115 286-427 8-124 (127)
75 2yvy_A MGTE, Mg2+ transporter 99.5 1.7E-14 5.9E-19 142.0 10.5 116 372-511 136-256 (278)
76 3oco_A Hemolysin-like protein 99.5 2.3E-14 7.7E-19 127.9 10.3 117 286-430 25-144 (153)
77 3oi8_A Uncharacterized protein 99.5 3.9E-14 1.3E-18 126.9 11.5 117 280-424 37-155 (156)
78 2p9m_A Hypothetical protein MJ 99.5 5.2E-14 1.8E-18 122.8 11.9 120 284-429 11-136 (138)
79 4aee_A Alpha amylase, catalyti 99.5 6.5E-15 2.2E-19 163.0 7.5 82 21-105 13-102 (696)
80 2yzi_A Hypothetical protein PH 99.5 9.6E-14 3.3E-18 121.2 13.0 122 283-430 9-130 (138)
81 3ocm_A Putative membrane prote 99.5 1.4E-13 4.8E-18 125.6 14.6 123 280-431 35-159 (173)
82 2o16_A Acetoin utilization pro 99.5 7.3E-14 2.5E-18 125.6 12.3 127 284-429 8-135 (160)
83 3lqn_A CBS domain protein; csg 99.5 1.3E-13 4.5E-18 122.2 13.5 120 289-430 25-144 (150)
84 3fv6_A YQZB protein; CBS domai 99.5 9.4E-14 3.2E-18 124.7 12.3 120 284-429 20-144 (159)
85 1o50_A CBS domain-containing p 99.5 2.5E-13 8.5E-18 121.6 14.8 134 284-429 19-153 (157)
86 3fhm_A Uncharacterized protein 99.5 2.3E-13 7.7E-18 123.0 14.0 117 289-430 35-151 (165)
87 2yvy_A MGTE, Mg2+ transporter 99.5 1.6E-13 5.5E-18 135.0 13.8 132 268-430 122-258 (278)
88 2rc3_A CBS domain; in SITU pro 99.5 1.1E-13 3.6E-18 120.5 11.2 115 289-429 17-131 (135)
89 3k2v_A Putative D-arabinose 5- 99.5 1.1E-13 3.7E-18 122.8 11.4 116 284-425 31-148 (149)
90 2nyc_A Nuclear protein SNF4; b 99.5 1.5E-13 5.1E-18 120.6 12.0 120 286-429 16-141 (144)
91 2uv4_A 5'-AMP-activated protei 99.5 2.5E-13 8.4E-18 120.9 13.5 115 289-427 29-149 (152)
92 4gqw_A CBS domain-containing p 99.5 8.7E-14 3E-18 123.1 10.4 134 284-429 8-143 (152)
93 3l2b_A Probable manganase-depe 99.5 3.1E-13 1.1E-17 130.3 13.8 210 187-427 7-242 (245)
94 2emq_A Hypothetical conserved 99.5 3.6E-13 1.2E-17 120.2 13.2 126 283-430 13-140 (157)
95 3pc3_A CG1753, isoform A; CBS, 99.5 1.2E-13 4.2E-18 148.0 11.8 122 371-511 384-510 (527)
96 1pvm_A Conserved hypothetical 99.5 3.3E-13 1.1E-17 124.2 13.1 121 284-428 12-132 (184)
97 3ctu_A CBS domain protein; str 99.5 1.5E-13 5.2E-18 122.7 9.9 122 286-430 20-143 (156)
98 2oux_A Magnesium transporter; 99.5 2.7E-13 9.3E-18 134.0 12.6 127 273-430 129-260 (286)
99 2pfi_A Chloride channel protei 99.5 2E-13 6.7E-18 122.7 10.6 124 286-429 18-147 (164)
100 2d4z_A Chloride channel protei 99.5 5.6E-13 1.9E-17 128.7 14.3 143 282-429 14-246 (250)
101 1y5h_A Hypothetical protein RV 99.5 5E-14 1.7E-18 122.2 6.2 116 286-427 13-129 (133)
102 4fry_A Putative signal-transdu 99.4 5.3E-13 1.8E-17 119.3 12.6 116 289-430 21-136 (157)
103 2zy9_A Mg2+ transporter MGTE; 99.4 7.4E-13 2.5E-17 139.8 15.3 166 234-430 108-278 (473)
104 3sl7_A CBS domain-containing p 99.4 2.1E-13 7.1E-18 124.5 9.2 138 286-429 9-156 (180)
105 2j9l_A Chloride channel protei 99.4 5.9E-13 2E-17 122.1 11.8 135 291-430 25-166 (185)
106 1yav_A Hypothetical protein BS 99.4 2.7E-13 9.2E-18 121.5 8.8 123 286-430 19-143 (159)
107 2zy9_A Mg2+ transporter MGTE; 99.4 3.6E-13 1.2E-17 142.2 10.6 116 372-511 156-276 (473)
108 3usb_A Inosine-5'-monophosphat 99.4 2.4E-12 8.1E-17 136.8 13.5 113 375-510 117-232 (511)
109 3org_A CMCLC; transporter, tra 99.4 1.5E-13 5.1E-18 150.3 3.0 137 372-510 454-623 (632)
110 1zfj_A Inosine monophosphate d 99.3 7.7E-12 2.6E-16 132.9 11.7 114 375-511 94-210 (491)
111 4fxs_A Inosine-5'-monophosphat 99.3 1.6E-12 5.5E-17 137.6 4.7 113 375-510 93-207 (496)
112 3pc3_A CG1753, isoform A; CBS, 99.3 1.2E-11 4.2E-16 132.4 11.1 123 282-430 385-512 (527)
113 1vrd_A Inosine-5'-monophosphat 99.2 7E-13 2.4E-17 141.0 0.4 115 374-511 98-214 (494)
114 3usb_A Inosine-5'-monophosphat 99.2 8.6E-11 2.9E-15 124.8 16.4 158 286-491 118-276 (511)
115 1me8_A Inosine-5'-monophosphat 99.2 6.9E-13 2.4E-17 141.0 0.2 113 377-511 103-220 (503)
116 4avf_A Inosine-5'-monophosphat 99.2 9.3E-13 3.2E-17 139.3 0.2 113 374-510 91-205 (490)
117 4af0_A Inosine-5'-monophosphat 99.1 4.3E-12 1.5E-16 131.6 0.3 109 377-509 144-255 (556)
118 1me8_A Inosine-5'-monophosphat 99.1 4.8E-12 1.6E-16 134.5 -0.8 154 287-489 103-260 (503)
119 4aef_A Neopullulanase (alpha-a 99.1 1.8E-10 6.3E-15 126.3 10.7 80 24-106 15-99 (645)
120 3org_A CMCLC; transporter, tra 99.1 4.5E-11 1.6E-15 130.6 5.5 137 283-426 455-622 (632)
121 1zfj_A Inosine monophosphate d 99.1 1.4E-09 4.6E-14 115.6 15.4 116 286-429 95-211 (491)
122 1jcn_A Inosine monophosphate d 99.0 2.3E-12 7.9E-17 137.6 -7.1 116 374-510 111-231 (514)
123 4af0_A Inosine-5'-monophosphat 99.0 3.3E-11 1.1E-15 125.0 0.6 113 287-427 144-256 (556)
124 2cu0_A Inosine-5'-monophosphat 99.0 3.7E-11 1.3E-15 127.3 0.3 108 377-510 99-206 (486)
125 4fxs_A Inosine-5'-monophosphat 99.0 2.1E-10 7.2E-15 121.4 4.1 112 286-427 94-207 (496)
126 1vrd_A Inosine-5'-monophosphat 98.9 2.1E-10 7.2E-15 121.9 3.0 114 286-429 100-215 (494)
127 4avf_A Inosine-5'-monophosphat 98.9 1.4E-10 4.9E-15 122.5 0.4 112 286-428 93-206 (490)
128 2cu0_A Inosine-5'-monophosphat 98.8 1.7E-09 5.7E-14 114.6 2.3 110 286-428 98-207 (486)
129 1jcn_A Inosine monophosphate d 98.7 5.4E-10 1.8E-14 119.2 -4.7 116 285-427 112-231 (514)
130 3ghd_A A cystathionine beta-sy 98.6 4.9E-08 1.7E-12 74.7 6.8 48 291-345 2-49 (70)
131 3ghd_A A cystathionine beta-sy 98.6 7.2E-08 2.5E-12 73.7 7.5 47 463-511 2-48 (70)
132 3fio_A A cystathionine beta-sy 98.4 2.1E-07 7.3E-12 70.5 5.6 62 381-446 2-63 (70)
133 3fio_A A cystathionine beta-sy 98.4 7.3E-07 2.5E-11 67.5 7.5 48 462-511 1-48 (70)
134 2z0b_A GDE5, KIAA1434, putativ 98.4 7.9E-07 2.7E-11 76.6 7.8 58 24-81 7-75 (131)
135 1ac0_A Glucoamylase; hydrolase 97.8 1.2E-05 4E-10 66.8 4.0 58 24-81 5-73 (108)
136 3c8d_A Enterochelin esterase; 97.6 0.00017 5.9E-09 74.1 10.3 89 24-114 29-156 (403)
137 1m7x_A 1,4-alpha-glucan branch 97.3 0.00063 2.2E-08 73.9 9.6 66 27-94 26-99 (617)
138 3k1d_A 1,4-alpha-glucan-branch 97.2 0.00051 1.7E-08 75.5 8.5 65 27-93 137-209 (722)
139 3aml_A OS06G0726400 protein; s 97.2 0.0005 1.7E-08 76.1 7.3 62 28-92 67-142 (755)
140 2laa_A Beta/alpha-amylase; SBD 96.1 0.011 3.9E-07 48.0 6.2 62 27-90 6-74 (104)
141 3vgf_A Malto-oligosyltrehalose 95.5 0.0085 2.9E-07 64.1 4.3 61 27-93 10-73 (558)
142 1qho_A Alpha-amylase; glycosid 95.4 0.032 1.1E-06 61.2 8.9 58 22-81 578-653 (686)
143 1bf2_A Isoamylase; hydrolase, 95.3 0.007 2.4E-07 67.1 3.1 55 28-85 18-85 (750)
144 2wsk_A Glycogen debranching en 95.1 0.022 7.6E-07 62.1 6.1 53 28-84 21-77 (657)
145 1wzl_A Alpha-amylase II; pullu 95.1 0.021 7.4E-07 61.3 5.9 61 22-82 19-87 (585)
146 2bhu_A Maltooligosyltrehalose 94.8 0.023 8E-07 61.2 5.4 61 27-94 35-96 (602)
147 2vr5_A Glycogen operon protein 94.8 0.023 7.7E-07 62.7 5.4 55 27-85 30-91 (718)
148 2vn4_A Glucoamylase; hydrolase 94.6 0.21 7E-06 53.7 12.0 59 23-81 494-563 (599)
149 1j0h_A Neopullulanase; beta-al 94.3 0.022 7.6E-07 61.3 3.6 61 22-82 19-89 (588)
150 3bmv_A Cyclomaltodextrin gluca 94.2 0.075 2.6E-06 58.2 7.6 59 23-81 581-651 (683)
151 1cyg_A Cyclodextrin glucanotra 93.9 0.094 3.2E-06 57.4 7.6 59 23-81 577-647 (680)
152 1d3c_A Cyclodextrin glycosyltr 93.8 0.1 3.5E-06 57.1 7.8 59 23-81 584-654 (686)
153 2e8y_A AMYX protein, pullulana 93.5 0.073 2.5E-06 58.6 5.9 64 27-93 114-184 (718)
154 2fhf_A Pullulanase; multiple d 93.4 0.069 2.4E-06 61.2 5.6 64 28-93 306-383 (1083)
155 1vem_A Beta-amylase; beta-alph 93.1 0.16 5.4E-06 53.5 7.5 58 23-81 417-485 (516)
156 4aio_A Limit dextrinase; hydro 92.3 0.09 3.1E-06 59.2 4.6 55 28-83 138-194 (884)
157 3faw_A Reticulocyte binding pr 91.3 0.088 3E-06 59.0 3.0 63 28-92 146-222 (877)
158 1ea9_C Cyclomaltodextrinase; h 91.3 0.042 1.4E-06 59.1 0.3 61 22-82 19-86 (583)
159 3m07_A Putative alpha amylase; 91.3 0.21 7.1E-06 53.9 5.8 61 28-95 44-107 (618)
160 2ya0_A Putative alkaline amylo 90.5 0.28 9.6E-06 53.9 6.0 64 28-93 26-105 (714)
161 2wan_A Pullulanase; hydrolase, 90.4 0.21 7E-06 56.6 4.9 61 28-92 327-397 (921)
162 4fch_A Outer membrane protein 89.9 0.24 8.4E-06 46.0 4.3 51 36-87 12-64 (221)
163 2wan_A Pullulanase; hydrolase, 89.5 0.49 1.7E-05 53.5 7.1 62 23-86 150-221 (921)
164 1ji1_A Alpha-amylase I; beta/a 88.1 0.37 1.3E-05 52.2 4.7 56 27-83 31-96 (637)
165 1gcy_A Glucan 1,4-alpha-maltot 87.7 0.1 3.5E-06 55.2 0.0 57 24-81 429-495 (527)
166 2ya1_A Putative alkaline amylo 86.8 0.46 1.6E-05 54.3 4.6 63 28-92 333-411 (1014)
167 2c3v_A Alpha-amylase G-6; carb 85.8 1.3 4.6E-05 35.5 5.6 59 28-88 12-77 (102)
168 2eef_A Protein phosphatase 1, 61.6 7.3 0.00025 33.8 4.1 66 36-109 60-139 (156)
169 4fe9_A Outer membrane protein 61.5 7.4 0.00025 40.1 5.0 46 37-83 151-198 (470)
170 4fem_A Outer membrane protein 61.0 6.6 0.00023 38.9 4.3 51 36-87 149-201 (358)
171 2djm_A Glucoamylase A; beta sa 57.1 28 0.00095 28.0 6.5 48 37-84 34-91 (106)
172 2jnz_A PHL P 3 allergen; timot 51.0 29 0.001 27.9 5.7 60 23-88 25-90 (108)
173 4dny_A Metalloprotease STCE; m 49.1 19 0.00066 29.8 4.4 24 67-91 99-123 (126)
174 1mhx_A Immunoglobulin-binding 46.0 8.2 0.00028 26.8 1.4 13 81-93 48-60 (65)
175 4fe9_A Outer membrane protein 44.4 18 0.0006 37.2 4.4 53 36-89 260-319 (470)
176 1tif_A IF3-N, translation init 42.7 41 0.0014 25.3 5.0 29 402-430 13-41 (78)
177 1igd_A Protein G; immunoglobul 39.9 12 0.00041 26.2 1.5 13 81-93 44-56 (61)
178 3fil_A Immunoglobulin G-bindin 39.7 7.8 0.00027 26.4 0.5 13 81-93 39-51 (56)
179 1svj_A Potassium-transporting 33.1 19 0.00066 31.0 2.1 35 472-508 121-155 (156)
180 4gln_D D-RFX001; heterochiral 31.9 18 0.00062 24.7 1.3 16 78-93 35-51 (56)
181 2rpv_A Immunoglobulin G-bindin 31.7 18 0.00063 26.1 1.4 13 81-93 58-70 (75)
182 4fch_A Outer membrane protein 31.0 14 0.0005 33.7 1.0 49 37-85 117-169 (221)
183 3ft1_A PHL P 3 allergen; beta- 30.5 72 0.0025 25.2 4.9 59 24-88 15-79 (100)
184 1tif_A IF3-N, translation init 29.1 69 0.0024 24.1 4.3 25 484-509 13-37 (78)
185 1pgx_A Protein G; immunoglobul 27.1 20 0.00068 26.5 0.9 13 81-93 52-64 (83)
186 4a02_A EFCBM33A, CBM33, chitin 23.4 3.5E+02 0.012 23.3 8.5 61 27-90 75-153 (166)
187 2fqm_A Phosphoprotein, P prote 23.1 35 0.0012 24.8 1.6 27 43-73 1-27 (75)
188 4aef_A Neopullulanase (alpha-a 21.5 90 0.0031 33.3 5.3 52 24-81 123-178 (645)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=6.8e-39 Score=323.47 Aligned_cols=308 Identities=25% Similarity=0.433 Sum_probs=246.5
Q ss_pred hHHHHHHHHHHHHHhhhCcccccCCCCCcEEEEeCCCCHHHHHHHHHHcCCcEeeeecCCCCeEEEeeeHHHHHHHHHHh
Q 010368 170 EADLQVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILREL 249 (512)
Q Consensus 170 ~~~~~~~~~~~~~fl~~~~~yd~~p~s~kvv~ld~~~~v~~A~~~l~e~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~ 249 (512)
+++.....+++.+||++++|||+||.+.++++++.+.|+.+|++.|.+++++++||||.+.++++|++|..|++.++..+
T Consensus 13 ~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~ 92 (323)
T 3t4n_C 13 SIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYY 92 (323)
T ss_dssp HHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHH
Confidence 45566788999999999999999999999999999999999999999999999999998878999999999999988766
Q ss_pred hcCCCCCChhhHhhhhHHHHHHhhhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCe
Q 010368 250 GNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQ 329 (512)
Q Consensus 250 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~ 329 (512)
+..+.. .+.++.+....|++.... ...|.++++++.+++++.+|++.|.+++++++||++.+...+ ..+
T Consensus 93 ~~~~~~--~~~l~~~~~~~v~~i~~~--------~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~-~~~ 161 (323)
T 3t4n_C 93 FSNPDK--FELVDKLQLDGLKDIERA--------LGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETH-REI 161 (323)
T ss_dssp HHCGGG--GGGGGGCBHHHHHHHHHH--------TTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTC-CEE
T ss_pred HcCcch--hHHHHHHHHHHHHHHHHH--------hCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCC-ccc
Confidence 543322 234555555566655432 235688999999999999999999999999999997432222 113
Q ss_pred EEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEEC
Q 010368 330 LLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVD 409 (512)
Q Consensus 330 lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 409 (512)
++|++|.+|+++++..+... ......+++++.+ .|.++++++.+++++.+|+++|.+++++++||+|
T Consensus 162 l~Givt~~di~~~l~~~~~~----~~~~~~~v~~~~~---------~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd 228 (323)
T 3t4n_C 162 VVSVLTQYRILKFVALNCRE----THFLKIPIGDLNI---------ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID 228 (323)
T ss_dssp EEEEEEHHHHHHHHHHHCGG----GGGCCSBGGGTTC---------SBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred eEEEecHHHHHHHHHhcCCc----hhhhhCcHHHcCC---------CCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 99999999999998765432 1223334444421 1667889999999999999999999999999999
Q ss_pred CCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEE
Q 010368 410 DNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVI 489 (512)
Q Consensus 410 ~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~V 489 (512)
++|+++|+||.+|++++...+.+.. ...++.++|..... . ..++++|.+++++.+|+++|.+++++++||
T Consensus 229 ~~~~~~Giit~~dl~~~~~~~~~~~---~~~~v~~~m~~~~~----~---~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V 298 (323)
T 3t4n_C 229 ENGYLINVYEAYDVLGLIKGGIYND---LSLSVGEALMRRSD----D---FEGVYTCTKNDKLSTIMDNIRKARVHRFFV 298 (323)
T ss_dssp TTCBEEEEEETTHHHHHHHTTHHHH---TTSBHHHHGGGSCT----T---CCCCEEECTTCBHHHHHHHHHHSCCCEEEE
T ss_pred CCCeEEEEEeHHHHHHHHhhchhhh---ccCCHHHHHhhccc----c---CCCCEEECCCCCHHHHHHHHHHhCCCEEEE
Confidence 9999999999999999876654322 24689998843110 0 127899999999999999999999999999
Q ss_pred EeCCCCeEEEEEehHHHHHHhhC
Q 010368 490 VEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 490 Vd~~~~~liGiIS~~DIl~~ll~ 512 (512)
||+ +|+++|+||.+||++++++
T Consensus 299 vd~-~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 299 VDD-VGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp ECT-TSBEEEEEEHHHHHHHHHH
T ss_pred ECC-CCcEEEEEEHHHHHHHHHh
Confidence 996 8999999999999999863
No 2
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=7.8e-34 Score=287.75 Aligned_cols=305 Identities=22% Similarity=0.430 Sum_probs=239.8
Q ss_pred HHHHHHHHHHHHHhhhCcccccCCCCCcEEEEeCCCCHHHHHHHHHHcCCcEeeeecCCCCeEEEeeeHHHHHHHHHHhh
Q 010368 171 ADLQVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELG 250 (512)
Q Consensus 171 ~~~~~~~~~~~~fl~~~~~yd~~p~s~kvv~ld~~~~v~~A~~~l~e~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~ 250 (512)
.+.....+.+.+||...+++|+|+.+.++++++.+.|+.+|++.|.+++++++||||.+.++++|++|..|++.++....
T Consensus 6 ~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~ 85 (334)
T 2qrd_G 6 ETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYY 85 (334)
T ss_dssp HHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHh
Confidence 45566788999999999999999999999999999999999999999999999999987789999999999998875443
Q ss_pred cCCCC-CChhhHhhhhHHHHHHhhhhhccccCCCCCcCCCCc--eEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCC-C
Q 010368 251 NHGSN-LTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPL--VYAGPNDNLKDVARKILHNEVATVPIIHSSSQDG-S 326 (512)
Q Consensus 251 ~~~~~-~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~--i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g-~ 326 (512)
..... ...+.+...+++.+++.... +|.+++ +++.+++++.+|++.|.+++++++||++. .++ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~l~~----------im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~~ 153 (334)
T 2qrd_G 86 QSSSFPEAIAEIDKFRLLGLREVERK----------IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDV--DGETG 153 (334)
T ss_dssp HHCSCGGGGGGGGSCBHHHHHHHHHH----------HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE--ETTTT
T ss_pred hccCCccHHHHHhhhchhhHHHHHHh----------hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC--CCCcC
Confidence 21100 01123344556666665433 245556 99999999999999999999999999963 222 0
Q ss_pred cCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEE
Q 010368 327 FPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIP 406 (512)
Q Consensus 327 ~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lp 406 (512)
...++|++|.+||++++...... ......+++++ ..+|.+++.++.+++++.+|++.|.+++++++|
T Consensus 154 ~~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l---------~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~ 220 (334)
T 2qrd_G 154 SEMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQM---------TIGTWSNLATASMETKVYDVIKMLAEKNISAVP 220 (334)
T ss_dssp EEEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGS---------SCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEE
T ss_pred ccceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHh---------CCcccCCceEECCCCcHHHHHHHHHHcCCcEEE
Confidence 01299999999999988754221 01122333332 113778889999999999999999999999999
Q ss_pred EECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcE
Q 010368 407 IVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRR 486 (512)
Q Consensus 407 Vvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~ 486 (512)
|+|++|+++|+||.+|++.....+.+. ....++.++|.... .+ ..++.+|.+++++.+|+++|.++++++
T Consensus 221 Vvd~~~~~~Giit~~dl~~~~~~~~~~---~~~~~v~~~m~~~~-----~~--~~~~~~v~~~~~l~~~~~~m~~~~~~~ 290 (334)
T 2qrd_G 221 IVNSEGTLLNVYESVDVMHLIQDGDYS---NLDLSVGEALLKRP-----AN--FDGVHTCRATDRLDGIFDAIKHSRVHR 290 (334)
T ss_dssp EECTTCBEEEEEETHHHHHHHTTSCGG---GGGSBHHHHHTTCC-----TT--CCCCCEECTTCBHHHHHHHHHHSCCCE
T ss_pred EEcCCCcEEEEEEHHHHHHHhhccccc---cccCcHHHHHhccc-----cc--CCCCEEECCCCcHHHHHHHHHHcCCCE
Confidence 999889999999999999877654322 22468899883210 00 047899999999999999999999999
Q ss_pred EEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 487 LVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 487 l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
+||||+ +|+++|+||.+||++++.
T Consensus 291 l~Vvd~-~g~l~Giit~~dil~~~~ 314 (334)
T 2qrd_G 291 LFVVDE-NLKLEGILSLADILNYII 314 (334)
T ss_dssp EEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred EEEECC-CCeEEEEEeHHHHHHHHH
Confidence 999995 899999999999999875
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=1.5e-33 Score=285.39 Aligned_cols=300 Identities=32% Similarity=0.563 Sum_probs=240.5
Q ss_pred HHHHHHHHHHhhhCcccccCCCCCcEEEEeCCCCHHHHHHHHHHcCCcEeeeecCCCCeEEEeeeHHHHHHHHHHhhcCC
Q 010368 174 QVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHG 253 (512)
Q Consensus 174 ~~~~~~~~~fl~~~~~yd~~p~s~kvv~ld~~~~v~~A~~~l~e~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~ 253 (512)
+..++.++.||++.+++|+|+.+.++++++.+.|+.+|++.|.+++++++||+|.+.++++|++|..|++.++.......
T Consensus 22 ~~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~ 101 (330)
T 2v8q_E 22 ESNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSA 101 (330)
T ss_dssp -CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhcc
Confidence 35577899999999999999999999999999999999999999999999999987789999999999998775432111
Q ss_pred CCCChhhHhhhhHHHHHHhhhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEe
Q 010368 254 SNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHI 333 (512)
Q Consensus 254 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGi 333 (512)
. .....+....++.|.... +.+|.++++++.+++++.+|+++|.+++++++||+| ++.| +++|+
T Consensus 102 ~-~~~~~l~~~~~~~~~~~~----------~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~---~~~Gi 165 (330)
T 2v8q_E 102 L-VQIYELEEHKIETWREVY----------LQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVID--PESG---NTLYI 165 (330)
T ss_dssp T-TTCCCGGGCBHHHHHHHH----------SSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEEC--TTTC---CEEEE
T ss_pred c-cchhHHhhccHHHHHHHH----------hhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEe--CCCC---cEEEE
Confidence 0 111234445566665433 335889999999999999999999999999999994 3244 79999
Q ss_pred eehhhHHHHHHhhcccCCCCcccccCccccccCcccccccCCCCC-CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCC
Q 010368 334 ASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR-RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDND 412 (512)
Q Consensus 334 is~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g 412 (512)
+|..|+++++........ ....+..+++++.+ |. .++.++.+++++.+|++.|.+++++++||+|++|
T Consensus 166 vt~~dl~~~~~~~~~~~~-~~~~~~~~v~~~~v----------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~ 234 (330)
T 2v8q_E 166 LTHKRILKFLKLFITEFP-KPEFMSKSLEELQI----------GTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKG 234 (330)
T ss_dssp ECHHHHHHHHHHHSCSSS-CCGGGGSBHHHHTC----------SBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTS
T ss_pred EcHHHHHHHHHHHhhccC-chhhhcCCHHHhcc----------cCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCC
Confidence 999999998876533211 01123344444422 33 5788999999999999999999999999999899
Q ss_pred cEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeC
Q 010368 413 SLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEA 492 (512)
Q Consensus 413 ~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~ 492 (512)
+++|+||.+|++.......+.. ...++.++|..+. .|.+++.+|.+++++.+|+++|.+++++++||+|+
T Consensus 235 ~l~Giit~~dl~~~~~~~~~~~---~~~~v~~~~~~~~-------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 304 (330)
T 2v8q_E 235 RVVDIYSKFDVINLAAEKTYNN---LDVSVTKALQHRS-------HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE 304 (330)
T ss_dssp BEEEEEEGGGTGGGGGSSCCCC---CSSBHHHHGGGCC-------SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cEEEEEEHHHHHHHHhcccccc---ccCcHHHHHhccc-------cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC
Confidence 9999999999998665443222 2468899884321 24578999999999999999999999999999995
Q ss_pred CCCeEEEEEehHHHHHHhh
Q 010368 493 GSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 493 ~~~~liGiIS~~DIl~~ll 511 (512)
+|+++|+||.+||++++.
T Consensus 305 -~g~l~Giit~~Dil~~~~ 322 (330)
T 2v8q_E 305 -HDVVKGIVSLSDILQALV 322 (330)
T ss_dssp -TSBEEEEEEHHHHHHHHH
T ss_pred -CCcEEEEEeHHHHHHHHH
Confidence 899999999999999875
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.98 E-value=3.6e-31 Score=260.71 Aligned_cols=268 Identities=14% Similarity=0.288 Sum_probs=208.2
Q ss_pred ccccCCCCCcEEEEeCCCCHHHHHHHHHHcCCcEeeeecCCCCeEEEeeeHHHHHHHHHHhhcCCCCCChhhHhhhhHHH
Q 010368 189 AYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISA 268 (512)
Q Consensus 189 ~yd~~p~s~kvv~ld~~~~v~~A~~~l~e~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~~~~~~l~~~~i~~ 268 (512)
+.+.+..+ ++++++++.|+.+|++.|.+++++++||+|++.++++|++|..|++.++...+. ...+.......
T Consensus 5 v~~~i~~~-~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~------~~~~~~~~~~~ 77 (280)
T 3kh5_A 5 VMKIAQNK-KIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK------YNLIREKHERN 77 (280)
T ss_dssp GGGTSCCS-CCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG------GHHHHTTSTTC
T ss_pred HHHHhcCC-CcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccch------hhhhhhccccc
Confidence 44555443 799999999999999999999999999999767899999999999986621110 00011000000
Q ss_pred HHHhhhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcc
Q 010368 269 WKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFR 348 (512)
Q Consensus 269 ~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~ 348 (512)
+.. .....++.+|.++++++.+++++.+|++.|.+++++++||+| ++ | +++|++|.+|+++++.....
T Consensus 78 ~~~------~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~-~---~~~Givt~~dl~~~~~~~~~ 145 (280)
T 3kh5_A 78 FLA------AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVN--DE-N---QLISLITERDVIRALLDKID 145 (280)
T ss_dssp HHH------HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEEC--TT-C---BEEEEEEHHHHHHHHGGGSC
T ss_pred hhH------HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEc--CC-C---EEEEEEEHHHHHHHHhhcCC
Confidence 000 001234557888999999999999999999999999999994 33 4 89999999999988765421
Q ss_pred cCCCCcccccCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 010368 349 HCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 428 (512)
Q Consensus 349 ~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~ 428 (512)
. ..+++ ++|.+++.++.+++++.+|++.|.+++++++||+ ++|+++|+||.+|+++...
T Consensus 146 ~--------~~~v~------------~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 146 E--------NEVID------------DYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp T--------TCBSG------------GGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHT
T ss_pred C--------CCCHH------------HHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHh
Confidence 1 12333 3488889999999999999999999999999999 6899999999999998764
Q ss_pred ccccc-c------cCcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEE
Q 010368 429 DKAYA-H------INLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIV 501 (512)
Q Consensus 429 ~~~~~-~------l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiI 501 (512)
.+... . ......++.++| .+++.+|.+++++.+|+++|.+++++++||+|+ +|+++|+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~m-------------~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-~g~~~Giv 270 (280)
T 3kh5_A 205 SDWAFNHMQTGNVREITNVRMEEIM-------------KRDVITAKEGDKLKKIAEIMVTNDIGALPVVDE-NLRIKGII 270 (280)
T ss_dssp SHHHHHHHHSCCTHHHHHCBHHHHS-------------BSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECT-TCBEEEEE
T ss_pred hhhhhhhhcccchhhhhCCcHHHHh-------------cCCCEEECCCCCHHHHHHHHHHCCCCEEEEECC-CCeEEEEE
Confidence 32110 0 001235666665 678999999999999999999999999999996 88999999
Q ss_pred ehHHHHHHh
Q 010368 502 SLSDIFKFL 510 (512)
Q Consensus 502 S~~DIl~~l 510 (512)
|++||++++
T Consensus 271 t~~dil~~l 279 (280)
T 3kh5_A 271 TEKDVLKYF 279 (280)
T ss_dssp EHHHHGGGG
T ss_pred eHHHHHHhh
Confidence 999999986
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=3e-30 Score=256.92 Aligned_cols=263 Identities=11% Similarity=0.153 Sum_probs=208.8
Q ss_pred hCcccccCCCCCcEEEEeCCCCHHHHHHHHHHcCCcEeeeecCCCCeEEEeeeHHHHHHHHHHhhcCCCCCChhhHhhhh
Q 010368 186 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHT 265 (512)
Q Consensus 186 ~~~~yd~~p~s~kvv~ld~~~~v~~A~~~l~e~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~~~~~~l~~~~ 265 (512)
..++.|++.. ++++++++.|+.+|++.|.+++++++||+| ++++|++|..|++..+..... ... .
T Consensus 19 ~~~V~dim~~--~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~--~~~--------~ 83 (296)
T 3ddj_A 19 GMNIETLMIK--NPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCK--DSC--------S 83 (296)
T ss_dssp CSSGGGTCEE--SCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC-----C--------C
T ss_pred ccCHHHhccC--CCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhccccc--ccc--------c
Confidence 3556677754 799999999999999999999999999998 789999999999986621110 000 0
Q ss_pred HHHHHHhhhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHh
Q 010368 266 ISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 345 (512)
Q Consensus 266 i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~ 345 (512)
...+.+. ....++.+|.++++++.+++++.+|+++|.+++++++||+| .+ | +++|++|.+|+++++..
T Consensus 84 ~~~~~~~------~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd--~~-~---~lvGivt~~dl~~~~~~ 151 (296)
T 3ddj_A 84 QGDLYHI------STTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVD--IN-D---KPVGIVTEREFLLLYKD 151 (296)
T ss_dssp HHHHHHH------HTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEEC--TT-S---CEEEEEEHHHHGGGGGG
T ss_pred chhhHHH------hcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEc--CC-C---cEEEEEeHHHHHHhhhc
Confidence 1111100 11234557888999999999999999999999999999994 33 4 79999999999876543
Q ss_pred hcccCCCCcccccCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH
Q 010368 346 YFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA 425 (512)
Q Consensus 346 ~~~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~ 425 (512)
.. ...+++++ |.+++.++.+++++.+|++.|.+++++++||+|++|+++|+||.+|++.
T Consensus 152 ~~---------~~~~v~~~------------m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 210 (296)
T 3ddj_A 152 LD---------EIFPVKVF------------MSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIK 210 (296)
T ss_dssp SC---------CCCBHHHH------------SBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred cc---------ccccHHHh------------hcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 21 12234444 8888999999999999999999999999999999999999999999998
Q ss_pred HHhccccccc---CcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEe
Q 010368 426 LAKDKAYAHI---NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVS 502 (512)
Q Consensus 426 ~~~~~~~~~l---~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS 502 (512)
..... +..+ .....++.++| .+++.+|.++++|.+|+++|.+++++++||+|+ +|+++|+||
T Consensus 211 ~~~~~-~~~~~~~~~~~~~v~~~m-------------~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-~g~~~Giit 275 (296)
T 3ddj_A 211 QLAKA-VDKLDPDYFYGKVVKDVM-------------VTNLVTIDELASVNRAAAEMIVKRIGSLLILNK-DNTIRGIIT 275 (296)
T ss_dssp HHHHH-HHHTCTHHHHTCBHHHHS-------------BCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEE
T ss_pred HHHHH-HhhcChhhhcCcCHHHHh-------------CCCCeEECCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEc
Confidence 76532 1110 01235677766 678999999999999999999999999999996 899999999
Q ss_pred hHHHHHHhh
Q 010368 503 LSDIFKFLL 511 (512)
Q Consensus 503 ~~DIl~~ll 511 (512)
++||++++.
T Consensus 276 ~~Dil~~l~ 284 (296)
T 3ddj_A 276 ERDLLIALH 284 (296)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.95 E-value=7e-28 Score=237.67 Aligned_cols=256 Identities=18% Similarity=0.286 Sum_probs=177.4
Q ss_pred CcEEEEeCCCCHHHHHHHHHHcCCcEeeeecCCCCeEEEeeeHHHHHHHHHHhhcCCCCCChhhHhhhhHHHHHHhhhhh
Q 010368 197 GKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYL 276 (512)
Q Consensus 197 ~kvv~ld~~~~v~~A~~~l~e~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~ 276 (512)
.++++++++.|+.+|++.|.++++.++||+|. .++++|++|..|++..+.. .+
T Consensus 9 ~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~~---------------~~----------- 61 (282)
T 2yzq_A 9 QNPVTITLPATRNYALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPDE---------------EQ----------- 61 (282)
T ss_dssp ESCCCEESSCC------------CCEEEEECT-TCCEEEEEESSCC----------------------------------
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhcc---------------CC-----------
Confidence 46788999999999999999999999999986 5789999999998753310 01
Q ss_pred ccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHH-HHHhhcccCCCCcc
Q 010368 277 NRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK-CVCRYFRHCSSSLP 355 (512)
Q Consensus 277 ~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~-~l~~~~~~~~~~~~ 355 (512)
++.+|.++++++.+++++.+|++.|.+++++++||+| .+ | +++|++|..|+++ ++.... .
T Consensus 62 ------v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd--~~-~---~~~Giit~~di~~~~~~~~~-------~ 122 (282)
T 2yzq_A 62 ------LAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVD--SK-G---KPVGILTVGDIIRRYFAKSE-------K 122 (282)
T ss_dssp --------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEEC--TT-S---CEEEEEEHHHHHHHTTTTCS-------G
T ss_pred ------HHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc--CC-C---EEEEEEEHHHHHHHHHhccC-------C
Confidence 1224667789999999999999999999999999994 33 4 7999999999987 554310 0
Q ss_pred cccCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHH------HHHhc
Q 010368 356 ILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT------ALAKD 429 (512)
Q Consensus 356 ~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~------~~~~~ 429 (512)
.... .++++|..++.++.+++++.+|++.|.+++++++||+|++|+++|+++.+|++ +....
T Consensus 123 ~~~~------------~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~ 190 (282)
T 2yzq_A 123 YKGV------------EIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKS 190 (282)
T ss_dssp GGGC------------BSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC----
T ss_pred cccC------------cHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhcc
Confidence 0111 34455888899999999999999999999999999999889999999999998 32210
Q ss_pred cc---ccccCcc-cccHHHHHh---cCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEe
Q 010368 430 KA---YAHINLS-EMTIHQALQ---LGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVS 502 (512)
Q Consensus 430 ~~---~~~l~~~-~~~v~~~l~---~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS 502 (512)
.. .....+. ......+.. .........++|.+++.+|.+++++.+|+++|.+++++++||+|+ +|+++|+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~~~lvGiit 269 (282)
T 2yzq_A 191 TELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRG-EGDLIGLIR 269 (282)
T ss_dssp ----------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET-TTEEEEEEE
T ss_pred chhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECC-CCCEEEEEe
Confidence 00 0000000 000000000 000011123456889999999999999999999999999999995 789999999
Q ss_pred hHHHHHHhh
Q 010368 503 LSDIFKFLL 511 (512)
Q Consensus 503 ~~DIl~~ll 511 (512)
++||++++.
T Consensus 270 ~~Dil~~~~ 278 (282)
T 2yzq_A 270 DFDLLKVLV 278 (282)
T ss_dssp HHHHGGGGC
T ss_pred HHHHHHHHH
Confidence 999999875
No 7
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.91 E-value=1.3e-24 Score=178.31 Aligned_cols=88 Identities=43% Similarity=0.871 Sum_probs=79.0
Q ss_pred CCCceeeEEEEecCCCcEEEEEEccCCCCCCCCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEeeCCCCCeeeCCCCC
Q 010368 21 PDTVLIPMRFVWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFISSEYGI 100 (512)
Q Consensus 21 ~~~~~~~~~f~w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~~d~~~~~~~d~~G~ 100 (512)
+.++.+|++|+|.++|++|+|+|+||+|+ ..+|.+. .|.|++++.|++|.|+|||+|||+|++||.+|++.|+.|+
T Consensus 6 ~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~---~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 6 APAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS---QNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp ----CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE---TTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred CCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC---CCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 45677999999999999999999999999 6799873 4799999999999999999999999999999999999999
Q ss_pred eeeEEEeeCCCC
Q 010368 101 VNTVLLATEPNF 112 (512)
Q Consensus 101 ~nn~~~v~~~~~ 112 (512)
.||+|.|.+.|.
T Consensus 82 ~Nnvi~V~~~d~ 93 (96)
T 1z0n_A 82 VNNIIQVKKTDF 93 (96)
T ss_dssp EEEEEEECSCTT
T ss_pred EeEEEEEcCCCc
Confidence 999999987764
No 8
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.90 E-value=3.2e-24 Score=205.77 Aligned_cols=90 Identities=24% Similarity=0.610 Sum_probs=81.7
Q ss_pred ceeeEEEEecCCCcEEEEEEccCCCCCCCCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEeeCCCCCeeeCCCCCeee
Q 010368 24 VLIPMRFVWPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFISSEYGIVNT 103 (512)
Q Consensus 24 ~~~~~~f~w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~~d~~~~~~~d~~G~~nn 103 (512)
.++|++|+|+++|++|+|+|||++|++.++|.|.++.+|.|++++.|++|.|+|||+|||+|++|+.+|++.|++|+.||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 46999999999999999999999999888998865667899999999999999999999999999999999999999999
Q ss_pred EEEeeCCCCC
Q 010368 104 VLLATEPNFM 113 (512)
Q Consensus 104 ~~~v~~~~~~ 113 (512)
+|.|.+++..
T Consensus 82 vi~V~~~~~~ 91 (252)
T 2qlv_B 82 YIEVRQPEKN 91 (252)
T ss_dssp EEEECC----
T ss_pred eeeccCcccc
Confidence 9999886544
No 9
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.89 E-value=1.7e-22 Score=198.45 Aligned_cols=195 Identities=18% Similarity=0.318 Sum_probs=156.6
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccC-ccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKL-PICAI 364 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~-~v~~l 364 (512)
+|.++++++.+++|+.+|+++|.+++++++||++ +++| +++|++|.+||++++...... ..+.. ....+
T Consensus 9 i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d--~~~~---~~~Givt~~di~~~~~~~~~~-----~~~~~~~~~~~ 78 (280)
T 3kh5_A 9 AQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVN--AGNN---KVVGIITSMDIVDFMGGGSKY-----NLIREKHERNF 78 (280)
T ss_dssp SCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEEC--TTTC---BEEEEEEHHHHHHHTTTSGGG-----HHHHTTSTTCH
T ss_pred hcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEE--CCCC---eEEEEEEHHHHHHHhcccchh-----hhhhhccccch
Confidence 5788999999999999999999999999999994 3345 899999999999877432110 00000 00000
Q ss_pred cCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHH
Q 010368 365 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQ 444 (512)
Q Consensus 365 ~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~ 444 (512)
......+++++|.++++++.+++++.+|++.|.+++++++||+|++|+++|++|.+|+++....... ...++.+
T Consensus 79 -~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~ 152 (280)
T 3kh5_A 79 -LAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKID-----ENEVIDD 152 (280)
T ss_dssp -HHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSC-----TTCBSGG
T ss_pred -hHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCC-----CCCCHHH
Confidence 0111235667799899999999999999999999999999999999999999999999987655422 1235566
Q ss_pred HHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 445 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 445 ~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
+| .+++.++.+++++.+|++.|.+++++++||++ +|+++|+||.+||++++.
T Consensus 153 ~m-------------~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~--~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 153 YI-------------TRDVIVATPGERLKDVARTMVRNGFRRLPVVS--EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp GC-------------BCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHT
T ss_pred Hh-------------CCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHh
Confidence 54 67889999999999999999999999999995 799999999999998863
No 10
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.87 E-value=3.6e-22 Score=198.41 Aligned_cols=192 Identities=18% Similarity=0.227 Sum_probs=157.6
Q ss_pred CCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccc
Q 010368 283 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 362 (512)
Q Consensus 283 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~ 362 (512)
++.+|.++++++.+++|+.+|++.|.+++++++||+ + | +++|++|..||++++...... ....+
T Consensus 22 V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~--d---~---~l~GivT~~Di~~~~~~~~~~--------~~~~~ 85 (296)
T 3ddj_A 22 IETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVA--N---E---KIEGLLTTRDLLSTVESYCKD--------SCSQG 85 (296)
T ss_dssp GGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEE--S---S---SEEEEEEHHHHHGGGTTCC-----------CCHH
T ss_pred HHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEE--C---C---eEEEEEeHHHHHHHhcccccc--------cccch
Confidence 345788899999999999999999999999999999 3 4 899999999999877532110 00011
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccH
Q 010368 363 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTI 442 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v 442 (512)
.+ .......++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|++|.+|++...... ....++
T Consensus 86 ~~-~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~------~~~~~v 158 (296)
T 3ddj_A 86 DL-YHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDL------DEIFPV 158 (296)
T ss_dssp HH-HHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGS------CCCCBH
T ss_pred hh-HHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcc------cccccH
Confidence 00 00012245666888999999999999999999999999999999999999999999998765433 224588
Q ss_pred HHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 443 HQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 443 ~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.++| .+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||..||++++.
T Consensus 159 ~~~m-------------~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 159 KVFM-------------STKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD-DNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HHHS-------------BCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred HHhh-------------cCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 8877 567899999999999999999999999999996 899999999999998763
No 11
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.85 E-value=7.9e-22 Score=195.49 Aligned_cols=87 Identities=24% Similarity=0.453 Sum_probs=79.4
Q ss_pred CCceeeEEEEecC-CCcEEEEEEccCCCCCCCCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEeeCCCCCee-eCCCC
Q 010368 22 DTVLIPMRFVWPY-GGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFI-SSEYG 99 (512)
Q Consensus 22 ~~~~~~~~f~w~~-~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~~d~~~~~~-~d~~G 99 (512)
+....|++|+|++ +|++|+|+||||||+..+||.+.+ ++|.|++++.||||+|+|||+|||+|++||++|.. +|++|
T Consensus 166 ~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~-~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G 244 (294)
T 3nme_A 166 GLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGK-GTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDG 244 (294)
T ss_dssp CCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECT-TTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTS
T ss_pred ccccccceeeeccCCCCEEEEEEeccCCCCcccceEcC-CCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCC
Confidence 3467899999999 789999999999999778998853 46999999999999999999999999999999965 89999
Q ss_pred CeeeEEEeeC
Q 010368 100 IVNTVLLATE 109 (512)
Q Consensus 100 ~~nn~~~v~~ 109 (512)
++||+|.|.+
T Consensus 245 ~~nn~~~v~~ 254 (294)
T 3nme_A 245 HTNNYAKVVD 254 (294)
T ss_dssp CCEEEEEECC
T ss_pred CEeEEEEECC
Confidence 9999999985
No 12
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.85 E-value=6.1e-21 Score=192.58 Aligned_cols=207 Identities=16% Similarity=0.259 Sum_probs=161.4
Q ss_pred CCcC--CCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcc
Q 010368 284 GKAF--PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI 361 (512)
Q Consensus 284 g~~~--~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v 361 (512)
+.+| ..+++++++++++.+|++.|.+++++++||++. +.+ +++|+++.+|++..+...+.... .....+
T Consensus 38 ~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~--~~~---~~vGivt~~Dll~~l~~~~~~~~----~~~~~l 108 (330)
T 2v8q_E 38 YDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDS--KKQ---SFVGMLTITDFINILHRYYKSAL----VQIYEL 108 (330)
T ss_dssp GGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEET--TTT---EEEEEEEHHHHHHHHHHHHHHHT----TTCCCG
T ss_pred hhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeC--CCC---eEEEEEEHHHHHHHHHHHHhccc----cchhHH
Confidence 3457 778999999999999999999999999999963 334 79999999999988765431100 000112
Q ss_pred ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC-CCcEEEEEeHHHHHHHHhccccc--ccCcc
Q 010368 362 CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD-NDSLLDIYCRSDITALAKDKAYA--HINLS 438 (512)
Q Consensus 362 ~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~liGivs~~Di~~~~~~~~~~--~l~~~ 438 (512)
....+..|...++++|.++++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|+++........ ..++.
T Consensus 109 ~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 188 (330)
T 2v8q_E 109 EEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFM 188 (330)
T ss_dssp GGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGG
T ss_pred hhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhh
Confidence 2233444445567789999999999999999999999999999999998 89999999999999876542110 00112
Q ss_pred cccHHHHHhcCCCCCCCccccC-CcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 439 EMTIHQALQLGQDSYSPYELRS-QRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 439 ~~~v~~~l~~~~~~~~~~~~~~-~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
..++.++. +|. +++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||..||++++.
T Consensus 189 ~~~v~~~~-----------v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~~~l~Giit~~dl~~~~~ 250 (330)
T 2v8q_E 189 SKSLEELQ-----------IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAA 250 (330)
T ss_dssp GSBHHHHT-----------CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-TSBEEEEEEGGGTGGGGG
T ss_pred cCCHHHhc-----------ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECC-CCcEEEEEEHHHHHHHHh
Confidence 34555542 233 67889999999999999999999999999995 899999999999998764
No 13
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.84 E-value=1.9e-20 Score=188.30 Aligned_cols=202 Identities=12% Similarity=0.240 Sum_probs=152.1
Q ss_pred CCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCc
Q 010368 288 PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVG 367 (512)
Q Consensus 288 ~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig 367 (512)
...++.++.++|+.+|++.|.+++++++||++ .+.+ +++|++|.+|++.++...+..... ... +......
T Consensus 39 ~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d--~~~~---~lvGilt~~Dl~~~l~~~~~~~~~-~~~----l~~~~~~ 108 (323)
T 3t4n_C 39 SYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWD--SKTS---RFAGLLTTTDFINVIQYYFSNPDK-FEL----VDKLQLD 108 (323)
T ss_dssp EEEEEEEETTSBHHHHHHHHHHTTCSCEEEEE--TTTT---EEEEEECHHHHHHHHHHHHHCGGG-GGG----GGGCBHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHcCCceEEEEe--CCCC---eEEEEEEHHHHHHHHHHHHcCcch-hHH----HHHHHHH
Confidence 45789999999999999999999999999996 3334 899999999999987654322100 001 1111101
Q ss_pred ccc--cccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCc-----EEEEEeHHHHHHHHhcccccccCcccc
Q 010368 368 TWV--PKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDS-----LLDIYCRSDITALAKDKAYAHINLSEM 440 (512)
Q Consensus 368 ~~~--~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~-----liGivs~~Di~~~~~~~~~~~l~~~~~ 440 (512)
.+. ..+.++|.++++++.+++++.+|++.|.+++++++||+|+++. ++|++|.+|++......... ..+...
T Consensus 109 ~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~~ 187 (323)
T 3t4n_C 109 GLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLKI 187 (323)
T ss_dssp HHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCCS
T ss_pred HHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhhC
Confidence 111 1234557788999999999999999999999999999998775 99999999999876533211 223345
Q ss_pred cHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 441 TIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 441 ~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
++.+++. .|.+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+||++++.
T Consensus 188 ~v~~~~~----------~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 188 PIGDLNI----------ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp BGGGTTC----------SBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEETTHHHHHHH
T ss_pred cHHHcCC----------CCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEeHHHHHHHHh
Confidence 6666520 13678999999999999999999999999999996 899999999999998764
No 14
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.82 E-value=2.2e-20 Score=183.83 Aligned_cols=173 Identities=16% Similarity=0.229 Sum_probs=130.2
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
+|.++++++.+++++.+|+++|.+++++++||++ + +| +++|+++..|+++.+. ..
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d--~-~~---~~~Giv~~~dl~~~~~-------------~~------ 60 (282)
T 2yzq_A 6 IMTQNPVTITLPATRNYALELFKKYKVRSFPVVN--K-EG---KLVGIISVKRILVNPD-------------EE------ 60 (282)
T ss_dssp HSEESCCCEESSCC------------CCEEEEEC--T-TC---CEEEEEESSCC--------------------------
T ss_pred hccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEc--C-CC---cEEEEEEHHHHHhhhc-------------cC------
Confidence 4678899999999999999999999999999994 3 34 8999999999975331 12
Q ss_pred CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccCcccccHHH
Q 010368 366 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQ 444 (512)
Q Consensus 366 ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~-~~~~~~~~~l~~~~~~v~~ 444 (512)
.++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|++|.+|+++ ....+.. ....++.+
T Consensus 61 ------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~----~~~~~v~~ 130 (282)
T 2yzq_A 61 ------QLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEK----YKGVEIEP 130 (282)
T ss_dssp ---------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSG----GGGCBSTT
T ss_pred ------CHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCC----cccCcHHH
Confidence 234448778899999999999999999999999999998899999999999988 5543210 11234555
Q ss_pred HHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHH
Q 010368 445 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIF 507 (512)
Q Consensus 445 ~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl 507 (512)
+| ..++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||..||+
T Consensus 131 ~m-------------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 131 YY-------------QRYVSIVWEGTPLKAALKALLLSNSMALPVVDS-EGNLVGIVDETDLL 179 (282)
T ss_dssp TS-------------BSCCCCEETTSBHHHHHHHHHTCSSSEEEEECT-TSCEEEEEEGGGGG
T ss_pred Hh-------------CCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHh
Confidence 44 678899999999999999999999999999995 89999999999998
No 15
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.81 E-value=1.4e-19 Score=182.77 Aligned_cols=209 Identities=12% Similarity=0.160 Sum_probs=152.7
Q ss_pred CCcCC--CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcc
Q 010368 284 GKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI 361 (512)
Q Consensus 284 g~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v 361 (512)
+.+|. .+++++++++|+.+|++.|.+++++++||++ .+.+ +++|+++.+|++.++...+..... ...+ ..+
T Consensus 25 ~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d--~~~~---~~vGiv~~~Dl~~~~~~~~~~~~~-~~~~-~~~ 97 (334)
T 2qrd_G 25 YDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWD--SEAN---KFAGLLTMADFVNVIKYYYQSSSF-PEAI-AEI 97 (334)
T ss_dssp GGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEE--TTTT---EEEEEECHHHHHHHHHHHHHHCSC-GGGG-GGG
T ss_pred hhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEe--CCCC---eEEEEEEHHHHHHHHHHHhhccCC-ccHH-HHH
Confidence 33564 4589999999999999999999999999996 3334 899999999999877543211000 0000 001
Q ss_pred ccccCcccccccCCCCCCCc--eeecCCCCHHHHHHHHHhcCCCEEEEECCCCc-----EEEEEeHHHHHHHHhcccccc
Q 010368 362 CAIPVGTWVPKIGEPNRRPL--AMLRPSASLSAALNLLVQAQVSSIPIVDDNDS-----LLDIYCRSDITALAKDKAYAH 434 (512)
Q Consensus 362 ~~l~ig~~~~~v~~~m~~~~--~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~-----liGivs~~Di~~~~~~~~~~~ 434 (512)
...++..+....+++|..++ +++.+++++.+|++.|.+++++++||+|+++. ++|++|.+|++.....+.. .
T Consensus 98 ~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~-~ 176 (334)
T 2qrd_G 98 DKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCK-E 176 (334)
T ss_dssp GSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCG-G
T ss_pred hhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhcc-c
Confidence 11111111111123355566 89999999999999999999999999987654 9999999999986654321 1
Q ss_pred cCcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 435 INLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 435 l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
..+...++.++. .+|.+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||..||++++.
T Consensus 177 ~~~~~~~v~~l~----------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 177 TAMLRVPLNQMT----------IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNS-EGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp GGGCCCBGGGSS----------CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEETHHHHHHHT
T ss_pred hhhhhCcHHHhC----------CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEHHHHHHHhh
Confidence 112234555531 024678899999999999999999999999999995 899999999999998764
No 16
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.78 E-value=1.8e-19 Score=164.36 Aligned_cols=126 Identities=22% Similarity=0.334 Sum_probs=103.5
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccc-----------------
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAH----------------- 434 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~----------------- 434 (512)
+|+++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+++.........
T Consensus 19 ~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (170)
T 4esy_A 19 PIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHL 98 (170)
T ss_dssp BGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHH
T ss_pred CHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhh
Confidence 345559999999999999999999999999999999999999999999999975332110000
Q ss_pred -cCcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 435 -INLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 435 -l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
......++.+ +|++++++|++++++.+|+++|.+++++++||+| +|+++|+||++||+++|+.
T Consensus 99 ~~~~~~~~v~~-------------im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 99 FETGRKLTASA-------------VMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ--DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHHHTTCBHHH-------------HCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHTTTSCC
T ss_pred hccccccchhh-------------hcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE--CCEEEEEEEHHHHHHHHHh
Confidence 0001223444 4588999999999999999999999999999999 5999999999999998863
No 17
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.75 E-value=6.7e-18 Score=146.61 Aligned_cols=120 Identities=16% Similarity=0.305 Sum_probs=105.4
Q ss_pred ccCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhc
Q 010368 372 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 448 (512)
Q Consensus 372 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~ 448 (512)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|+|+.+|++.....+. ...++.++|
T Consensus 7 ~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~------~~~~v~~~m-- 78 (130)
T 3i8n_A 7 PVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS------GQKQLGAVM-- 78 (130)
T ss_dssp CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT------TTSBHHHHS--
T ss_pred CHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC------CcCCHHHHh--
Confidence 4566687 456789999999999999999999999999987 89999999999998765431 246788876
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||+.||+++++|
T Consensus 79 ------------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 79 ------------RPIQVVLNNTALPKVFDQMMTHRLQLALVVDE-YGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ------------EECCEEETTSCHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHHHT
T ss_pred ------------cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-CCCEEEEEEHHHHHHHHcC
Confidence 35789999999999999999999999999995 8999999999999999976
No 18
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.73 E-value=3.8e-18 Score=147.60 Aligned_cols=119 Identities=13% Similarity=0.389 Sum_probs=102.0
Q ss_pred cCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcC
Q 010368 373 IGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 449 (512)
Q Consensus 373 v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~ 449 (512)
++++|.+ +++++.+++++.+|++.|.+++++++||+|++ |+++|+|+.+|+++..... ....++.++|
T Consensus 5 v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~------~~~~~v~~~m--- 75 (127)
T 3nqr_A 5 VRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSD------AEAFSMDKVL--- 75 (127)
T ss_dssp HHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTT------CCCCCHHHHC---
T ss_pred HHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcc------CCCCCHHHHc---
Confidence 4445774 48899999999999999999999999999987 8999999999998755332 1246788876
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
. ++.++.+++++.+|+++|.+++++++||+|+ +|+++|+||++||+++++|
T Consensus 76 ----------~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 76 ----------R-TAVVVPESKRVDRMLKEFRSQRYHMAIVIDE-FGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp ----------B-CCCEEETTCBHHHHHHHHHHTTCCEEEEECT-TSCEEEEEEHHHHHHHC--
T ss_pred ----------C-CCeEECCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 2 3678999999999999999999999999996 8999999999999999875
No 19
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.73 E-value=6.5e-18 Score=151.96 Aligned_cols=117 Identities=21% Similarity=0.320 Sum_probs=98.3
Q ss_pred CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCCCccc
Q 010368 379 RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYEL 458 (512)
Q Consensus 379 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~ 458 (512)
.+++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+++...........+...++.++|
T Consensus 25 ~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im------------ 92 (156)
T 3k6e_A 25 KNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMT------------ 92 (156)
T ss_dssp TSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTC------------
T ss_pred hHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhh------------
Confidence 47889999999999999999999999999999999999999999998665433222222344555544
Q ss_pred cCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 459 RSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 459 ~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.+|++++++.+|+++|.++++ +||||+ +|+++|+||++||++++.
T Consensus 93 -~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~-~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 93 -KTDVAVVSPDFTITEVLHKLVDESF--LPVVDA-EGIFQGIITRKSILKAVN 141 (156)
T ss_dssp -BCSCCCBCTTCCHHHHHHHTTTSSE--EEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred -cCCceecccccHHHHHHHHHHHcCC--eEEEec-CCEEEEEEEHHHHHHHHH
Confidence 7889999999999999999998764 999996 999999999999999873
No 20
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.73 E-value=1.1e-17 Score=145.39 Aligned_cols=121 Identities=12% Similarity=0.201 Sum_probs=103.6
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECC-CCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcC
Q 010368 373 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDD-NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 449 (512)
Q Consensus 373 v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~ 449 (512)
++++|. .+++++.+++++.+|+++|.+++++++||+++ +|+++|+++.+|+++....+.. +...++.++|
T Consensus 4 v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~----~~~~~v~~~m--- 76 (130)
T 3hf7_A 4 VNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE----FTKEIMLRAA--- 76 (130)
T ss_dssp HHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC----CCHHHHHHHS---
T ss_pred HHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc----cchhhHHHhc---
Confidence 344574 46889999999999999999999999999975 5899999999999987765321 2234677765
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||+.||+++++|
T Consensus 77 -----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 77 -----------DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE-YGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp -----------BCCCEEETTCBHHHHHHHHHHHCCCEEEEECT-TSCEEEEEEHHHHHHHHHC
T ss_pred -----------cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC-CCCEEEEeeHHHHHHHHhC
Confidence 46789999999999999999999999999995 8999999999999999876
No 21
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.73 E-value=1.7e-17 Score=147.41 Aligned_cols=119 Identities=20% Similarity=0.322 Sum_probs=104.5
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhc
Q 010368 372 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 448 (512)
Q Consensus 372 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~ 448 (512)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|++....... ..++.++|
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~~m-- 94 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELEEIL-- 94 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGGGTC--
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHHHhc--
Confidence 35555887 89999999999999999999999999999987 89999999999998654431 24566644
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
+++.++.+++++.+|+++|.+++++++||+|+ +|+++|+||+.||+++++|
T Consensus 95 ------------~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 95 ------------RDIIYISENLTIDKALERIRKEKLQLAIVVDE-YGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp ------------BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT-TSSEEEEEEHHHHHHHHHH
T ss_pred ------------CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 57899999999999999999999999999995 8999999999999999874
No 22
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.73 E-value=1.4e-17 Score=142.57 Aligned_cols=117 Identities=20% Similarity=0.354 Sum_probs=104.7
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCC
Q 010368 373 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 452 (512)
Q Consensus 373 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~ 452 (512)
++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+++.+|++.....+. .++.++|
T Consensus 3 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~--------~~v~~~~------ 68 (122)
T 3kpb_A 3 VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNK--------KTIEEIM------ 68 (122)
T ss_dssp HHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTC--------CBGGGTS------
T ss_pred hHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcc--------cCHHHHh------
Confidence 44558889999999999999999999999999999999999999999999998765431 2667655
Q ss_pred CCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 453 YSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 453 ~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|++.|.+++.+++||+|+ +|+++|+||..||++++.
T Consensus 69 -------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 69 -------TRNVITAHEDEPVDHVAIKMSKYNISGVPVVDD-YRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp -------BSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHC
T ss_pred -------cCCCeEECCCCCHHHHHHHHHHhCCCeEEEECC-CCCEEEEEeHHHHHHHhh
Confidence 667899999999999999999999999999995 899999999999999885
No 23
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.71 E-value=8.5e-18 Score=145.84 Aligned_cols=117 Identities=14% Similarity=0.338 Sum_probs=100.5
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcC
Q 010368 373 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 449 (512)
Q Consensus 373 v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~ 449 (512)
++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|+|+.+|+++..... ..++.++|
T Consensus 7 v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--------~~~v~~~m--- 75 (129)
T 3jtf_A 7 VADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--------ALDIRSLV--- 75 (129)
T ss_dssp HHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT--------TSCGGGGC---
T ss_pred HHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC--------CcCHHHHh---
Confidence 444587 677899999999999999999999999999985 8999999999998754321 24666655
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
+++.++.+++++.+|+++|.+++.+++||+|+ +|+++|+||++||+++++|
T Consensus 76 -----------~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 76 -----------RPAVFIPEVKRLNVLLREFRASRNHLAIVIDE-HGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp -----------BCCCEEETTCBHHHHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHHHH
T ss_pred -----------CCCeEeCCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 34789999999999999999999999999995 8999999999999999874
No 24
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.71 E-value=6.4e-17 Score=147.71 Aligned_cols=119 Identities=18% Similarity=0.346 Sum_probs=105.3
Q ss_pred ccCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhc
Q 010368 372 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 448 (512)
Q Consensus 372 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~ 448 (512)
+++++|. .+++++.+++++.+|+++|.+++++++||+|++ ++++|+|+.+|++.....+. ..++.++|
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~im-- 113 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-------RLELVDLV-- 113 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-------CCCGGGGC--
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-------cccHHHHh--
Confidence 4667788 778999999999999999999999999999987 99999999999998765431 24666644
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||+.||++++++
T Consensus 114 ------------~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 114 ------------KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE-YGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ------------BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHT
T ss_pred ------------cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC-CCCEEEEeeHHHHHHHHhC
Confidence 57899999999999999999999999999995 8999999999999999875
No 25
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.71 E-value=8.5e-17 Score=138.08 Aligned_cols=119 Identities=18% Similarity=0.287 Sum_probs=104.9
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCC
Q 010368 373 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 452 (512)
Q Consensus 373 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~ 452 (512)
++++|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|+++.+|+++....+. .....++.++|
T Consensus 3 v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~----~~~~~~v~~~m------ 71 (125)
T 1pbj_A 3 VEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGD----DLAEVKVWEVM------ 71 (125)
T ss_dssp HHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTC----CTTTSBHHHHC------
T ss_pred HHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCC----cccccCHHHHc------
Confidence 3455888899999999999999999999999999999 899999999999998665432 12356888877
Q ss_pred CCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 453 YSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 453 ~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|++.|.+++++++||+|+ |+++|+||.+||++++.
T Consensus 72 -------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 72 -------ERDLVTISPRATIKEAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAKM 121 (125)
T ss_dssp -------BCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHHC
T ss_pred -------CCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 568999999999999999999999999999993 99999999999999875
No 26
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.70 E-value=4.7e-17 Score=143.15 Aligned_cols=121 Identities=14% Similarity=0.201 Sum_probs=104.7
Q ss_pred ccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCC--cEEEEEeHHHHHHHHhcccccccCcccccHHHHHh
Q 010368 370 VPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDND--SLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 447 (512)
Q Consensus 370 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g--~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~ 447 (512)
..+++++|.+++.++.+++++.+|++.|.+++++++||+|+++ +++|+|+.+|+++....+.. ...++.++|
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~~m- 77 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLD-----LDGPAMPIA- 77 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCC-----TTSBSGGGC-
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCC-----CCCCHHHHc-
Confidence 3456677999999999999999999999999999999999888 99999999999986654311 134666655
Q ss_pred cCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHh
Q 010368 448 LGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 510 (512)
Q Consensus 448 ~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~l 510 (512)
.+++.+|.++ ++.+|+++|.+++++++||+|+ +|+++|+||.+||++++
T Consensus 78 ------------~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 78 ------------NSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNK-NGELVGVLSIRDLCFER 126 (141)
T ss_dssp ------------BCCCEEETTS-BHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHSCH
T ss_pred ------------CCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-CCcEEEEEEHHHHHHHH
Confidence 6789999999 9999999999999999999995 89999999999998765
No 27
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.70 E-value=8.9e-17 Score=142.90 Aligned_cols=118 Identities=12% Similarity=0.298 Sum_probs=104.8
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcC
Q 010368 372 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 449 (512)
Q Consensus 372 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~ 449 (512)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++....+. .+...++.++|
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----~~~~~~v~~~m--- 101 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGV----DMRDASIADVM--- 101 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSS----CCTTCBHHHHS---
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCC----CcccCcHHHHc---
Confidence 45666988 8999999999999999999999999999999999999999999998775532 13457889887
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHH
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFK 508 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~ 508 (512)
.+++.+|.+++++.+|+++|.+++++++||+|+ ++++|+||..||++
T Consensus 102 ----------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~ 148 (149)
T 3k2v_A 102 ----------TRGGIRIRPGTLAVDALNLMQSRHITCVLVADG--DHLLGVVHMHDLLR 148 (149)
T ss_dssp ----------EESCCEECTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTC
T ss_pred ----------CCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhc
Confidence 567899999999999999999999999999995 49999999999985
No 28
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.69 E-value=2e-16 Score=139.18 Aligned_cols=124 Identities=27% Similarity=0.512 Sum_probs=102.0
Q ss_pred CCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCCCc
Q 010368 377 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPY 456 (512)
Q Consensus 377 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~ 456 (512)
|.++++++.+++++.+|++.|.+++++++||+|++|+++|+++.+|+++....+.+ .....++.++|..... .
T Consensus 17 ~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~m~~~~~----~ 89 (144)
T 2nyc_A 17 TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY---NDLSLSVGEALMRRSD----D 89 (144)
T ss_dssp BCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHHHHHCC------
T ss_pred CCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccc---ccCCccHHHHHhcCcc----c
Confidence 66788999999999999999999999999999988999999999999987654321 1234689998732100 0
Q ss_pred cccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 457 ELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 457 ~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
..++.+|.+++++.+|++.|.+++++++||+|+ +|+++|+||.+||++++.
T Consensus 90 ---~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 90 ---FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-VGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp -------CEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred ---cCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC-CCCEEEEEEHHHHHHHHH
Confidence 026889999999999999999999999999995 899999999999999875
No 29
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.69 E-value=1.1e-16 Score=144.00 Aligned_cols=121 Identities=16% Similarity=0.324 Sum_probs=103.8
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCC
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 451 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 451 (512)
+++++|.+ ++++.+++++.+|++.|.+++++++||+|++|+++|+|+.+|++.....+.. ....++.++|
T Consensus 18 ~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~v~~~m----- 87 (159)
T 3fv6_A 18 QVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQE----LTSVPVHIIM----- 87 (159)
T ss_dssp BGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSC----TTTCBGGGTS-----
T ss_pred CHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCc----ccCcCHHHHH-----
Confidence 34555876 4599999999999999999999999999999999999999999986643211 2346777766
Q ss_pred CCCCccccCC--cceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCC---eEEEEEehHHHHHHhh
Q 010368 452 SYSPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSK---RVEGIVSLSDIFKFLL 511 (512)
Q Consensus 452 ~~~~~~~~~~--~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~---~liGiIS~~DIl~~ll 511 (512)
.+ ++.+|.+++++.+|+++|.+++++++||+|+ +| +++|+||..||++++.
T Consensus 88 --------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 88 --------TRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD-TDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp --------EETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-CSSSEEEEEEEEHHHHHHHHH
T ss_pred --------cCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCcceeEEEEEEHHHHHHHHH
Confidence 44 7889999999999999999999999999996 77 9999999999999874
No 30
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.69 E-value=1.5e-16 Score=141.97 Aligned_cols=122 Identities=35% Similarity=0.598 Sum_probs=103.3
Q ss_pred CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCCCccc
Q 010368 379 RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYEL 458 (512)
Q Consensus 379 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~ 458 (512)
+++.++.+++++.+|++.|.+++++++||+|++|+++|+|+.+|++.......+. ....++.++|..+ .+
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~---~~~~~v~~~m~~~-------~~ 98 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYN---NLDVSVTKALQHR-------SH 98 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCC---CTTSBGGGGGGTC-------CH
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhh---hhcchHHHHHhhh-------hc
Confidence 4788999999999999999999999999999899999999999999876544221 1245777776321 12
Q ss_pred cCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 459 RSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 459 ~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
|.+++.+|.+++++.+|++.|.+++++++||+|+ +|+++|+||..||++++.
T Consensus 99 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 99 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQALV 150 (152)
T ss_dssp HHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHC
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 2367899999999999999999999999999995 899999999999999885
No 31
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.69 E-value=3.3e-17 Score=141.76 Aligned_cols=120 Identities=17% Similarity=0.217 Sum_probs=104.0
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCC
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 451 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 451 (512)
+++++|.+++.++.+++++.+|++.|.+++++++||+|+ |+++|+|+.+|+++....+.. ...++.++|
T Consensus 6 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~-----~~~~v~~~m----- 74 (128)
T 3gby_A 6 TFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPT-----VKEKLGEEL----- 74 (128)
T ss_dssp BGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCC-----TTCBCCGGG-----
T ss_pred EHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCc-----ccCcHHHHc-----
Confidence 455669999999999999999999999999999999998 999999999999875443211 113566655
Q ss_pred CCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 452 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 452 ~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|++.|.+++.+++||+|+ +|+++|+||..||++++.
T Consensus 75 --------~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 75 --------LETVRSYRPGEQLFDNLISVAAAKCSVVPLADE-DGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp --------CBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred --------cCCCcEECCCCCHHHHHHHHHhCCCcEEEEECC-CCCEEEEEEHHHHHHHHH
Confidence 678889999999999999999999999999995 899999999999999874
No 32
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.69 E-value=1.5e-17 Score=145.78 Aligned_cols=120 Identities=13% Similarity=0.284 Sum_probs=101.3
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcC
Q 010368 373 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 449 (512)
Q Consensus 373 v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~ 449 (512)
++++|. .+++++.+++++.+|+++|.+++++++||+|++ |+++|+|+.+|+++...... ....++.++|
T Consensus 5 v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~-----~~~~~v~~~m--- 76 (136)
T 3lfr_A 5 VRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD-----GDSDDVKKLL--- 76 (136)
T ss_dssp HHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS-----GGGCCGGGTC---
T ss_pred hHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc-----CCCcCHHHHc---
Confidence 444576 568899999999999999999999999999987 89999999999987654221 1235666655
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
. ++.++.+++++.+|+++|.+++++++||+|+ +|+++|+||++||+++++|
T Consensus 77 ----------~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 77 ----------R-PATFVPESKRLNVLLREFRANHNHMAIVIDE-YGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp ----------B-CCCEEETTCBHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHTTC--
T ss_pred ----------C-CCeEECCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHhC
Confidence 3 4889999999999999999999999999996 8999999999999998864
No 33
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.69 E-value=2.3e-16 Score=137.87 Aligned_cols=121 Identities=20% Similarity=0.400 Sum_probs=105.2
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHH-HHHHhcccccccCcccccHHHHHhcCC
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDI-TALAKDKAYAHINLSEMTIHQALQLGQ 450 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di-~~~~~~~~~~~l~~~~~~v~~~l~~~~ 450 (512)
+++++|.+++.++.+++++.+|+++|.+++.+++||+|++|+++|+++.+|+ +.....+. ....++.++|
T Consensus 9 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~~v~~~m---- 79 (138)
T 2p9m_A 9 KVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKY-----TLETTIGDVM---- 79 (138)
T ss_dssp BGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCC-----CSSCBHHHHS----
T ss_pred CHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcc-----cCCcCHHHHh----
Confidence 3455588889999999999999999999999999999988999999999999 77654331 2346788877
Q ss_pred CCCCCccccCCcceEEcCCCCHHHHHHHHhcCC-----CcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 451 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPG-----VRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 451 ~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~-----~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|++.|.+++ ++++||+|+ +|+++|+||..||++++.
T Consensus 80 ---------~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 80 ---------TKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK-NNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp ---------CSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred ---------CCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 567899999999999999999999 999999995 899999999999999874
No 34
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.69 E-value=8.1e-17 Score=142.90 Aligned_cols=126 Identities=19% Similarity=0.365 Sum_probs=103.0
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccc---------cccCcccc
Q 010368 372 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY---------AHINLSEM 440 (512)
Q Consensus 372 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~---------~~l~~~~~ 440 (512)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|+|+.+|++.+...... ........
T Consensus 6 ~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
T 4gqw_A 6 TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGK 85 (152)
T ss_dssp BGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CC
T ss_pred EhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccc
Confidence 45566877 79999999999999999999999999999999999999999999753211100 00011235
Q ss_pred cHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 441 TIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 441 ~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
++.++| .+++++|.+++++.+|+++|.+++++++||+|+ +|+++|+||.+||++++.
T Consensus 86 ~v~~~m-------------~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 86 LVGDLM-------------TPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS-DGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp BHHHHS-------------EESCCCEESSSBHHHHHHHHHHSSCCEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred cHHHhc-------------CCCceEECCCCcHHHHHHHHHHCCCCEEEEECC-CCcEEEEEEHHHHHHHHH
Confidence 677766 567889999999999999999999999999995 899999999999999885
No 35
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.69 E-value=6e-17 Score=140.81 Aligned_cols=121 Identities=17% Similarity=0.269 Sum_probs=104.1
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccCcccccHHHHHhcCCC
Q 010368 373 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQALQLGQD 451 (512)
Q Consensus 373 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~-~~~~~~~~~l~~~~~~v~~~l~~~~~ 451 (512)
++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+|+.+|++. +...+. .....++.++|
T Consensus 10 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----~~~~~~v~~~m----- 80 (133)
T 1y5h_A 10 ARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGL----DPNTATAGELA----- 80 (133)
T ss_dssp HHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTC----CTTTSBHHHHH-----
T ss_pred HHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCC----CccccCHHHHh-----
Confidence 34448788899999999999999999999999999998899999999999984 443321 12346889988
Q ss_pred CCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 452 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 452 ~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
.+++.++.+++++.+|++.|.+++.+++||+|+ |+++|+||.+||++++.+
T Consensus 81 --------~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 81 --------RDSIYYVDANASIQEMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp --------TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTCC-
T ss_pred --------cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 567899999999999999999999999999993 899999999999998753
No 36
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.69 E-value=2.6e-16 Score=141.80 Aligned_cols=125 Identities=20% Similarity=0.267 Sum_probs=105.0
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhccccc----ccCcccccHHHHHh
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYA----HINLSEMTIHQALQ 447 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~----~l~~~~~~v~~~l~ 447 (512)
+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+|+.+||+......... .......++.++|
T Consensus 6 ~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~im- 84 (160)
T 2o16_A 6 KVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVM- 84 (160)
T ss_dssp BGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHHHS-
T ss_pred cHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHHh-
Confidence 45566888899999999999999999999999999999889999999999998765431100 0012345777776
Q ss_pred cCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 448 LGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 448 ~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.+|.+++++.+|++.|.+++++++||+| +|+++|+||..||++++.
T Consensus 85 ------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 85 ------------HTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA--KDVLVGIITDSDFVTIAI 134 (160)
T ss_dssp ------------CSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE--TTEEEEEECHHHHHHHHH
T ss_pred ------------cCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 67899999999999999999999999999999 399999999999999864
No 37
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.68 E-value=2.5e-16 Score=137.76 Aligned_cols=120 Identities=18% Similarity=0.366 Sum_probs=103.8
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccCcccccHHHHHhcCC
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQALQLGQ 450 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~-~~~~~~~~~l~~~~~~v~~~l~~~~ 450 (512)
+++++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+|+.+|+++ +...+. ....++.++|
T Consensus 8 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~~~~~v~~~m---- 78 (138)
T 2yzi_A 8 PIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-----PYDIPVERIM---- 78 (138)
T ss_dssp BGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-----CTTSBGGGTC----
T ss_pred hHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-----cccCCHHHHh----
Confidence 455668889999999999999999999999999999998899999999999974 433321 1235677655
Q ss_pred CCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 451 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 451 ~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|++.|.+++++++ |+|+ +|+++|+||..||++++.
T Consensus 79 ---------~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~-~g~~~Giit~~dil~~~~ 128 (138)
T 2yzi_A 79 ---------TRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE-EGKIVGIFTLSDLLEASR 128 (138)
T ss_dssp ---------BCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ---------hCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC-CCCEEEEEEHHHHHHHHH
Confidence 6789999999999999999999999999 9995 899999999999999875
No 38
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.68 E-value=7e-17 Score=144.33 Aligned_cols=117 Identities=18% Similarity=0.316 Sum_probs=101.8
Q ss_pred CCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEE-CC-CCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcC
Q 010368 374 GEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIV-DD-NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 449 (512)
Q Consensus 374 ~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~-~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~ 449 (512)
+++|.+ +++++.+++++.+|++.|.+++++++||+ |+ +|+++|+||.+|++....... ..++.++|
T Consensus 23 ~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-------~~~v~~~m--- 92 (153)
T 3oco_A 23 SDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-------KAKISTIM--- 92 (153)
T ss_dssp HHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-------TSBGGGTC---
T ss_pred eeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-------CCcHHHHh---
Confidence 344775 78999999999999999999999999999 75 489999999999998655431 24566644
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||+.||+++++|
T Consensus 93 -----------~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~-~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 93 -----------RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE-YGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp -----------BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT-TSCEEEEECHHHHHHHHHC
T ss_pred -----------CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCCEEEEeeHHHHHHHHhc
Confidence 57899999999999999999999999999995 8999999999999999875
No 39
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.68 E-value=1.9e-16 Score=137.62 Aligned_cols=120 Identities=15% Similarity=0.235 Sum_probs=104.7
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCC
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 451 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 451 (512)
+++++|.+++.++.+++++.+|++.|.+++++++||+| +|+++|+++.+|++.....+.. ...++.++|
T Consensus 5 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~-----~~~~v~~~~----- 73 (133)
T 2ef7_A 5 IVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKS-----LETKAEEFM----- 73 (133)
T ss_dssp BGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC-----TTCBGGGTS-----
T ss_pred cHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCC-----cccCHHHHc-----
Confidence 45566888899999999999999999999999999999 8999999999999887654321 135667655
Q ss_pred CCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 452 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 452 ~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.+|.+++++.+|++.|.+++.+++||+|+ +|+++|+||..||++++.
T Consensus 74 --------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 74 --------TASLITIREDSPITGALALMRQFNIRHLPVVDD-KGNLKGIISIRDITRAID 124 (133)
T ss_dssp --------EECCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred --------CCCCEEECCCCCHHHHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 567889999999999999999999999999995 899999999999999874
No 40
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.68 E-value=3.1e-16 Score=143.43 Aligned_cols=118 Identities=15% Similarity=0.192 Sum_probs=101.9
Q ss_pred ccCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhc
Q 010368 372 KIGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN-DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 448 (512)
Q Consensus 372 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~ 448 (512)
+++++|. .+++++.+++++.+|+++|.+++++++||+|++ |+++|+|+.+||+....... ..++. +
T Consensus 37 ~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~-------~~~v~--~-- 105 (173)
T 3ocm_A 37 SIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-------RVRRN--R-- 105 (173)
T ss_dssp CSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------SCCGG--G--
T ss_pred CHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC-------cchhH--h--
Confidence 3455585 468899999999999999999999999999876 89999999999998654331 23455 3
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
.++++++.+++++.+|+++|.+++++++||+|+ +|+++|+||+.||+++++|
T Consensus 106 -----------~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde-~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 106 -----------LRDPIIVHESIGILRLMDTLKRSRGQLVLVADE-FGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp -----------SBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT-TCCEEEEECHHHHHHHHHC
T ss_pred -----------cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-CCCEEEEEeHHHHHHHHhC
Confidence 357889999999999999999999999999995 8999999999999999875
No 41
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.68 E-value=9.3e-17 Score=143.79 Aligned_cols=122 Identities=20% Similarity=0.276 Sum_probs=101.1
Q ss_pred CCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCC
Q 010368 374 GEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 451 (512)
Q Consensus 374 ~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 451 (512)
+++|. ++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|++............+...++.++|
T Consensus 18 ~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m----- 92 (156)
T 3ctu_A 18 ETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMT----- 92 (156)
T ss_dssp GGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGC-----
T ss_pred HHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHhc-----
Confidence 34476 67899999999999999999999999999999999999999999998765432211112235666655
Q ss_pred CCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 452 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 452 ~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|++.|.+++ ++||||+ +|+++|+||.+||++++.
T Consensus 93 --------~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~-~g~~~Giit~~dil~~l~ 141 (156)
T 3ctu_A 93 --------KTDVAVVSPDFTITEVLHKLVDES--FLPVVDA-EGIFQGIITRKSILKAVN 141 (156)
T ss_dssp --------BCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT-TSBEEEEEETTHHHHHHH
T ss_pred --------cCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 678899999999999999999987 6999995 899999999999999874
No 42
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.67 E-value=3.2e-16 Score=141.07 Aligned_cols=130 Identities=15% Similarity=0.223 Sum_probs=104.2
Q ss_pred cCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC--CCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCC
Q 010368 373 IGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD--NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQ 450 (512)
Q Consensus 373 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~ 450 (512)
++++|.++++++.+++++.+|+++|.+++++++||+|+ +|+++|+|+..|++.....+..........++.++|....
T Consensus 15 v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~~ 94 (164)
T 2pfi_A 15 VEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARGC 94 (164)
T ss_dssp HHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTTC
T ss_pred HHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhcccc
Confidence 44558889999999999999999999999999999996 7999999999999987654322111123457888884321
Q ss_pred CCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 451 DSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 451 ~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
. ....+.+|.+++++.+|++.|.+++++++||+| +|+++|+||.+||++++.
T Consensus 95 ~-------~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 95 P-------TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS--RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp C-------CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred c-------ccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 0 011278999999999999999999999999999 699999999999999874
No 43
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=4.8e-16 Score=139.40 Aligned_cols=124 Identities=8% Similarity=0.132 Sum_probs=104.5
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCE-EEEECCCCcEEEEEeHHHHHHHHhcc------ccc-----ccCccc
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSS-IPIVDDNDSLLDIYCRSDITALAKDK------AYA-----HINLSE 439 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~-lpVvd~~g~liGivs~~Di~~~~~~~------~~~-----~l~~~~ 439 (512)
+++++|.++++++.+++++.+|+++|.++++++ +||+|++ +++|+|+.+|+++..... ... ......
T Consensus 17 ~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (157)
T 1o50_A 17 DVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIA 95 (157)
T ss_dssp HHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCSS
T ss_pred cHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcC
Confidence 466779999999999999999999999999999 9999977 999999999998764310 000 001234
Q ss_pred ccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 440 MTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 440 ~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.++.++| .+ +.+|.+++++.+|+++|.+++++++||+|+ +|+++|+||..||++++.
T Consensus 96 ~~v~~im-------------~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 96 KNASEIM-------------LD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE-KGEIVGDLNSLEILLALW 152 (157)
T ss_dssp CBHHHHC-------------BC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred CcHHHHc-------------CC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 5677766 66 899999999999999999999999999995 899999999999999874
No 44
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=1.8e-16 Score=143.57 Aligned_cols=121 Identities=18% Similarity=0.350 Sum_probs=103.9
Q ss_pred cCCCCCC---CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcC
Q 010368 373 IGEPNRR---PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLG 449 (512)
Q Consensus 373 v~~~m~~---~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~ 449 (512)
++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|+|+.+||++....... .....++.++|
T Consensus 26 v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~m--- 99 (165)
T 3fhm_A 26 VKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGA---ASLQQSVSVAM--- 99 (165)
T ss_dssp HHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGG---GGGTSBGGGTS---
T ss_pred HHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCC---ccccCCHHHHh---
Confidence 4444763 68999999999999999999999999999999999999999999986554321 12245777765
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.+|.+++++.+|+++|.+++++++||+|+ |+++|+||..||++++.
T Consensus 100 ----------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 100 ----------TKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp ----------BSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ----------cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 678899999999999999999999999999993 99999999999999875
No 45
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.66 E-value=2.3e-16 Score=140.14 Aligned_cols=123 Identities=22% Similarity=0.247 Sum_probs=101.7
Q ss_pred cCCCCC--CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccc-cccCcccccHHHHHhcC
Q 010368 373 IGEPNR--RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY-AHINLSEMTIHQALQLG 449 (512)
Q Consensus 373 v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~-~~l~~~~~~v~~~l~~~ 449 (512)
++++|. .+++++.+++++.+|++.|.+++++++||+|++|+++|+||.+||+........ ........++.++|
T Consensus 17 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m--- 93 (150)
T 3lqn_A 17 VKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVM--- 93 (150)
T ss_dssp HHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTC---
T ss_pred hhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHHh---
Confidence 334477 458999999999999999999999999999999999999999999987643211 00112235566655
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.+|.+++++.+|++.|.++++ +||||+ +|+++|+||..||++++.
T Consensus 94 ----------~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~-~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 94 ----------KQDIPVLKLEDSFAKALEMTIDHPF--ICAVNE-DGYFEGILTRRAILKLLN 142 (150)
T ss_dssp ----------BSSCCEEETTCBHHHHHHHHHHCSE--EEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred ----------cCCCceeCCCCCHHHHHHHHHhCCE--EEEECC-CCcEEEEEEHHHHHHHHH
Confidence 6789999999999999999999997 999996 899999999999999874
No 46
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.65 E-value=3.7e-16 Score=144.08 Aligned_cols=123 Identities=16% Similarity=0.274 Sum_probs=105.6
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCC
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQD 451 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~ 451 (512)
+++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+++.+||+........ .....++.++|
T Consensus 10 ~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~---~~~~~~v~~im----- 81 (184)
T 1pvm_A 10 RVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNK---KPDEVPIRLVM----- 81 (184)
T ss_dssp BGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCC---CGGGSBGGGTS-----
T ss_pred CHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc---CcccCCHHHHh-----
Confidence 4566698899999999999999999999999999999988999999999999886543110 12235667665
Q ss_pred CCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 452 SYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 452 ~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|+++|.+++++++||+|+ +|+++|+||..||++++.
T Consensus 82 --------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 82 --------RKPIPKVKSDYDVKDVAAYLSENGLERCAVVDD-PGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp --------BSSCCEEETTCBHHHHHHHHHHHTCSEEEEECT-TCCEEEEEEHHHHTTTSC
T ss_pred --------CCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 668899999999999999999999999999995 799999999999998763
No 47
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.65 E-value=3.2e-16 Score=143.32 Aligned_cols=125 Identities=24% Similarity=0.378 Sum_probs=101.2
Q ss_pred cCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccc--------cc--------
Q 010368 373 IGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAY--------AH-------- 434 (512)
Q Consensus 373 v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~--------~~-------- 434 (512)
++++|.+ +++++.+++++.+|+++|.+++++++||+|++|+++|+|+.+||+++...... ..
T Consensus 6 v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (180)
T 3sl7_A 6 VGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTF 85 (180)
T ss_dssp HHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCSH
T ss_pred HHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhhh
Confidence 4455776 78999999999999999999999999999999999999999999852210000 00
Q ss_pred -------cCcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHH
Q 010368 435 -------INLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIF 507 (512)
Q Consensus 435 -------l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl 507 (512)
......++.++| .+++.+|.+++++.+|+++|.+++++++||+|+ +|+++|+||.+||+
T Consensus 86 ~~~~~~~~~~~~~~v~~~m-------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil 151 (180)
T 3sl7_A 86 NELQKLISKTYGKVVGDLM-------------TPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA-DGKLIGILTRGNVV 151 (180)
T ss_dssp HHHHHHHHTTTTCBHHHHS-------------EESCCCEETTSBHHHHHHHHTTSTTCEEEEECT-TCBEEEEEEHHHHH
T ss_pred HHHHHHHhccccccHHHHh-------------CCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHH
Confidence 001234555555 667899999999999999999999999999996 89999999999999
Q ss_pred HHhh
Q 010368 508 KFLL 511 (512)
Q Consensus 508 ~~ll 511 (512)
+++.
T Consensus 152 ~~~~ 155 (180)
T 3sl7_A 152 RAAL 155 (180)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 48
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.65 E-value=7e-16 Score=138.00 Aligned_cols=124 Identities=17% Similarity=0.212 Sum_probs=102.6
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhccc-ccccCcccccHHHHHhc
Q 010368 372 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA-YAHINLSEMTIHQALQL 448 (512)
Q Consensus 372 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~-~~~l~~~~~~v~~~l~~ 448 (512)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|+|+.+|++....... +....+...++.++|
T Consensus 12 ~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m-- 89 (157)
T 2emq_A 12 TVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVM-- 89 (157)
T ss_dssp BSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGGTC--
T ss_pred cHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHHHh--
Confidence 45566875 8889999999999999999999999999998899999999999998654321 100012234566554
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|++.|.++++ +||||+ +|+++|+||.+||++++.
T Consensus 90 -----------~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~-~g~~~Giit~~dil~~~~ 138 (157)
T 2emq_A 90 -----------NRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND-DGYFAGIFTRREVLKQLN 138 (157)
T ss_dssp -----------BCCCCEEETTSBHHHHHHHHHHSSE--EEEECS-SSSEEEEEEHHHHHHHHH
T ss_pred -----------CCCCceecCCCcHHHHHHHHhhCCE--EEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 6789999999999999999999987 999995 899999999999999874
No 49
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.65 E-value=3.5e-16 Score=136.38 Aligned_cols=120 Identities=13% Similarity=0.280 Sum_probs=102.1
Q ss_pred cCCCCC---CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH-HHhcccccccCcccccHHHHHhc
Q 010368 373 IGEPNR---RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA-LAKDKAYAHINLSEMTIHQALQL 448 (512)
Q Consensus 373 v~~~m~---~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~-~~~~~~~~~l~~~~~~v~~~l~~ 448 (512)
++++|. +++.++.+++++.+|++.|.+++++++||+| +|+++|+|+.+|+++ +...+. .....++.++|
T Consensus 8 v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~----~~~~~~v~~~m-- 80 (135)
T 2rc3_A 8 VKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDK----PVKDTQVKEIM-- 80 (135)
T ss_dssp HHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSS----CGGGSBGGGTS--
T ss_pred HHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCC----CcccCCHHHhc--
Confidence 344476 7889999999999999999999999999998 899999999999986 333221 12345677765
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
.+++.++.+++++.+|++.|.+++++++||+| +|+++|+||.+||++++.+
T Consensus 81 -----------~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 81 -----------TRQVAYVDLNNTNEDCMALITEMRVRHLPVLD--DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp -----------BCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred -----------cCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe--CCEEEEEEEHHHHHHHHHh
Confidence 66889999999999999999999999999999 5999999999999998753
No 50
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.65 E-value=1.1e-15 Score=147.53 Aligned_cols=200 Identities=12% Similarity=0.106 Sum_probs=131.2
Q ss_pred CCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCC-----CCcc--
Q 010368 283 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCS-----SSLP-- 355 (512)
Q Consensus 283 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~-----~~~~-- 355 (512)
++.+|.++++++.+++++.+|+++|.+++++++||+| .+ | +++|++|..|+++++........ ....
T Consensus 9 v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd--~~-~---~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v 82 (245)
T 3l2b_A 9 VEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVAD--GN-N---HLLGMLSTSNITATYMDIWDSNILAKSATSLDNI 82 (245)
T ss_dssp GGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEEC--TT-C---BEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHH
T ss_pred HHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc--CC-C---EEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHH
Confidence 3457889999999999999999999999999999994 33 4 89999999999998864321100 0000
Q ss_pred -------------cccCccccccCccc-ccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCC---------
Q 010368 356 -------------ILKLPICAIPVGTW-VPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDND--------- 412 (512)
Q Consensus 356 -------------~l~~~v~~l~ig~~-~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g--------- 412 (512)
......+.+.++.. ...+.+.+....+.+..+ ..+++..+.+.+++++++++...
T Consensus 83 ~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a 160 (245)
T 3l2b_A 83 LDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTPSKEIIELA 160 (245)
T ss_dssp HHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHH
T ss_pred HHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHH
Confidence 00000011111111 112223333444444444 48889999999999998885321
Q ss_pred ---cEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCCCccccC-CcceEEcCCCCHHHHHHHHhcCCCcEEE
Q 010368 413 ---SLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRS-QRCQMCLPSDTLHKVMERLANPGVRRLV 488 (512)
Q Consensus 413 ---~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~-~~~~tv~~~~tL~~a~~~m~~~~~~~l~ 488 (512)
.+-.+.+..|........ ....++.++| . +++.++.+++++.+|+++|.+++++++|
T Consensus 161 ~~~~~~~i~t~~d~~~~~~~~------~~~~~v~~im-------------~~~~~~~~~~~~~~~~~~~~m~~~~~~~~p 221 (245)
T 3l2b_A 161 KKNNITVITTPHDSFTASRLI------VQSLPVDYVM-------------TKDNLVAVSTDDLVEDVKVTMSETRYSNYP 221 (245)
T ss_dssp HHHTCEEEECSSCHHHHHHHG------GGGSBHHHHS-------------BCTTCCCEETTSBHHHHHHHHHHHCCSEEE
T ss_pred HHcCCeEEEeCCChHHHHHHH------hcCCceeeEe-------------cCCccEEECCCCcHHHHHHHHHhcCCceEE
Confidence 233444444444322211 1134677766 6 6899999999999999999999999999
Q ss_pred EEeCCCCeEEEEEehHHHHHHh
Q 010368 489 IVEAGSKRVEGIVSLSDIFKFL 510 (512)
Q Consensus 489 VVd~~~~~liGiIS~~DIl~~l 510 (512)
|||+ +|+++|+||++||+++.
T Consensus 222 Vvd~-~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 222 VIDE-NNKVVGSIARFHLISTH 242 (245)
T ss_dssp EECT-TCBEEEEEECC------
T ss_pred EEcC-CCeEEEEEEHHHhhchh
Confidence 9996 89999999999999864
No 51
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.65 E-value=6e-16 Score=138.98 Aligned_cols=123 Identities=18% Similarity=0.213 Sum_probs=103.4
Q ss_pred cCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhccc-ccccCcccccHHHHHhcC
Q 010368 373 IGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA-YAHINLSEMTIHQALQLG 449 (512)
Q Consensus 373 v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~-~~~l~~~~~~v~~~l~~~ 449 (512)
++++|.+ +++++.+++++.+|++.|.+++++++||+|++|+++|+|+.+||+....... +........++.++|
T Consensus 16 v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m--- 92 (159)
T 1yav_A 16 VGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVM--- 92 (159)
T ss_dssp HHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHS---
T ss_pred HHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhc---
Confidence 3344776 7899999999999999999999999999999999999999999998765421 111112346788876
Q ss_pred CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 450 QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 450 ~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.+|.+++++.+|++.|.++++ +||+|+ +|+++|+||.+||++++.
T Consensus 93 ----------~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~-~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 93 ----------LTDIPRLHINDPIMKGFGMVINNGF--VCVEND-EQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp ----------BCSCCEEETTSBHHHHHHHTTTCSE--EEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred ----------CCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC-CCeEEEEEEHHHHHHHHH
Confidence 6688999999999999999999987 999996 899999999999999864
No 52
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.65 E-value=5.5e-16 Score=138.86 Aligned_cols=121 Identities=14% Similarity=0.316 Sum_probs=103.6
Q ss_pred ccCCCCC------CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHH
Q 010368 372 KIGEPNR------RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQA 445 (512)
Q Consensus 372 ~v~~~m~------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~ 445 (512)
+++++|. +++.++.+++++.+|++.|.+++++++||++ +|+++|+|+.+|+++....... .....++.++
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~ 83 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQER---SSKATRVEEI 83 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTC---CSSSCBHHHH
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccC---CccccCHHHH
Confidence 4455565 5578999999999999999999999999965 8999999999999986544321 1235688888
Q ss_pred HhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 446 LQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 446 l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
| .+++.++.+++++.+|+++|.+++++++||+| +|+++|+||..||++++.
T Consensus 84 m-------------~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dil~~l~ 134 (157)
T 4fry_A 84 M-------------TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD--GGKLIGLISIGDLVKSVI 134 (157)
T ss_dssp S-------------BSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred c-------------CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 7 56789999999999999999999999999999 599999999999999875
No 53
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.63 E-value=1e-15 Score=143.95 Aligned_cols=116 Identities=19% Similarity=0.238 Sum_probs=102.4
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhc---CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhc
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQA---QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 448 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~---~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~ 448 (512)
+++++|.++++++.++.++.+|++.|.+. +++.+||+|++|+++|+|+.+|++... ...++.++|
T Consensus 55 ~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~im-- 122 (205)
T 3kxr_A 55 EIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE----------PHEPLISLL-- 122 (205)
T ss_dssp CGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC----------TTSBGGGGC--
T ss_pred hHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC----------CcchHHHHh--
Confidence 35556999999999999999999999987 889999999999999999999987421 134677765
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++++|.+++++.+|++.|.+++++.+||||+ +|+++|+||..||++.+.
T Consensus 123 -----------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~-~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 123 -----------SEDSRALTANTTLLDAAEAIEHSREIELPVIDD-AGELIGRVTLRAATALVR 173 (205)
T ss_dssp -----------CSSCCCEETTSCHHHHHHHHHTSSCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred -----------cCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 678999999999999999999999999999996 899999999999998864
No 54
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=1.4e-15 Score=143.85 Aligned_cols=158 Identities=12% Similarity=0.143 Sum_probs=100.2
Q ss_pred CCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccc
Q 010368 283 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 362 (512)
Q Consensus 283 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~ 362 (512)
++.+|.++++++.+++|+.+|+++|.+++++.+||+| .+ + +++|++|.+|+++.+. ..+
T Consensus 15 ~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~-~---~l~Givt~~dl~~~~~-------------~~~-- 73 (213)
T 1vr9_A 15 VKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKD--RE-G---HFRGVVNKEDLLDLDL-------------DSS-- 73 (213)
T ss_dssp GGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEEC--TT-S---BEEEEEEGGGGTTSCT-------------TSB--
T ss_pred HHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEc--CC-C---EEEEEEEHHHHHhhcC-------------CCc--
Confidence 3557889999999999999999999999999999994 23 4 8999999999964221 223
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccH
Q 010368 363 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTI 442 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v 442 (512)
++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+++...... .+
T Consensus 74 ----------v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~ 134 (213)
T 1vr9_A 74 ----------VFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AM 134 (213)
T ss_dssp ----------SGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C-
T ss_pred ----------HHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cC
Confidence 34448889999999999999999999999999999998899999999999998665321 11
Q ss_pred HHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeC
Q 010368 443 HQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEA 492 (512)
Q Consensus 443 ~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~ 492 (512)
.+.+.. -.+.+.....++.+|.+.|.+++++.++|++.
T Consensus 135 ~~~~~~------------l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~ 172 (213)
T 1vr9_A 135 DVPGIR------------FSVLLEDKPGELRKVVDALALSNINILSVITT 172 (213)
T ss_dssp --------------------------------------------------
T ss_pred CCCcEE------------EEEEeCCCCccHHHHHHHHHHCCCcEEEEEEE
Confidence 221100 01111233445999999999999999999863
No 55
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.63 E-value=2.1e-15 Score=141.74 Aligned_cols=162 Identities=15% Similarity=0.153 Sum_probs=127.2
Q ss_pred EeeeHHHHHHHHHHhhcCCCCCChhhHhhhhHHHHHHhhhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhC---C
Q 010368 235 GVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN---E 311 (512)
Q Consensus 235 Gilt~~Dii~il~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~---~ 311 (512)
.-++..|.++++..+.. ....+.+..+.-++...+...+.|+...+|.+|.++++++.+++|+.+|++.|.++ +
T Consensus 11 ~~m~~dd~~dll~~l~~---~~~~~~l~~l~~~e~~~i~~~l~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~ 87 (205)
T 3kxr_A 11 AQLSPEDLIEWSDYLPE---SFTDRALAQMGERQRQRFELYDQYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDC 87 (205)
T ss_dssp GGSCHHHHHHTTTTSCH---HHHHHHHHHSCHHHHHHHHHHHHSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTT
T ss_pred HcCCHHHHHHHHHhCCH---HHHHHHHHcCCHHHHHHHHHHhCCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccC
Confidence 33566777776644321 11123333444555666667778899999999999999999999999999999997 8
Q ss_pred CceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcccccccCCCCCCCceeecCCCCHH
Q 010368 312 VATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLS 391 (512)
Q Consensus 312 i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~ 391 (512)
++.+||++ . .+ +++|++|.+|++.. ....++++ +|.++++++.+++++.
T Consensus 88 ~~~~~Vvd--~-~~---~lvGivt~~dll~~-------------~~~~~v~~------------im~~~~~~v~~~~~l~ 136 (205)
T 3kxr_A 88 NDNLFIVD--E-AD---KYLGTVRRYDIFKH-------------EPHEPLIS------------LLSEDSRALTANTTLL 136 (205)
T ss_dssp CCEEEEEC--T-TC---BEEEEEEHHHHTTS-------------CTTSBGGG------------GCCSSCCCEETTSCHH
T ss_pred eeEEEEEc--C-CC---eEEEEEEHHHHHhC-------------CCcchHHH------------HhcCCCeEECCCCCHH
Confidence 99999994 3 34 89999999998631 01233444 4888899999999999
Q ss_pred HHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 392 AALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 392 ~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
+|+++|.+++++.+||+|++|+++|+||..|++..+.+.
T Consensus 137 ~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 137 DAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp HHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 999999999999999999999999999999999877654
No 56
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.62 E-value=5.9e-16 Score=138.84 Aligned_cols=114 Identities=11% Similarity=0.298 Sum_probs=99.6
Q ss_pred ccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCC-cEEEEEeHHHHHHHHhcccccccCcccccHHHHHhc
Q 010368 372 KIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDND-SLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 448 (512)
Q Consensus 372 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~ 448 (512)
+++++|.+ +++++.+++++.+|++.|.+++++++||+|+++ +++|+|+.+|++.....+ ...++.++|
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~~im-- 109 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLKSIL-- 109 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHHHHC--
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHHHHc--
Confidence 45566875 789999999999999999999999999999874 999999999998754332 235788876
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHH
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIF 507 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl 507 (512)
. ++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||+.||+
T Consensus 110 -----------~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~g~~~Givt~~Dil 155 (156)
T 3oi8_A 110 -----------R-PAVFVPEGKSLTALLKEFREQRNHMAIVIDE-YGGTSGLVTFEDII 155 (156)
T ss_dssp -----------B-CCCEEETTSBHHHHHHHHHHTTCCEEEEECT-TSSEEEEEEHHHHC
T ss_pred -----------C-CCEEECCCCCHHHHHHHHHhcCCeEEEEECC-CCCEEEEEEHHHhc
Confidence 3 4889999999999999999999999999996 89999999999986
No 57
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.62 E-value=7.4e-16 Score=145.73 Aligned_cols=121 Identities=17% Similarity=0.222 Sum_probs=104.4
Q ss_pred cccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHH
Q 010368 367 GTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 446 (512)
Q Consensus 367 g~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l 446 (512)
.+|.+.++++|.++++++.+++++.+|+++|.+++++++||+|++++++|+|+.+|+..... ..++.++|
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~----------~~~v~~im 78 (213)
T 1vr9_A 9 HHHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL----------DSSVFNKV 78 (213)
T ss_dssp ----CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT----------TSBSGGGC
T ss_pred cccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC----------CCcHHHHc
Confidence 45666777889999999999999999999999999999999998899999999999875321 23566655
Q ss_pred hcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 447 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++.++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+||++++.
T Consensus 79 -------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~Dil~~~~ 129 (213)
T 1vr9_A 79 -------------SLPDFFVHEEDNITHALLLFLEHQEPYLPVVDE-EMRLKGAVSLHDFLEALI 129 (213)
T ss_dssp -------------BCTTCCEETTSBHHHHHHHHHHCCCSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred -------------cCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 678899999999999999999999999999995 799999999999998763
No 58
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.61 E-value=7.7e-15 Score=141.77 Aligned_cols=139 Identities=17% Similarity=0.237 Sum_probs=104.5
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC--CcEEEEEeHHHHHHHHhcccccccC-------------
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN--DSLLDIYCRSDITALAKDKAYAHIN------------- 436 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--g~liGivs~~Di~~~~~~~~~~~l~------------- 436 (512)
.|+++|.++++++.+++++.+|.++|.+++++.+||||++ ++++|+|+++||+.++.........
T Consensus 14 ~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~~ 93 (250)
T 2d4z_A 14 QVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEGR 93 (250)
T ss_dssp BTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC--
T ss_pred ChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccccccc
Confidence 5778899999999999999999999999999999999874 6899999999999765432100000
Q ss_pred -----------------ccc---------------------------------------------------------ccH
Q 010368 437 -----------------LSE---------------------------------------------------------MTI 442 (512)
Q Consensus 437 -----------------~~~---------------------------------------------------------~~v 442 (512)
+.+ ++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 173 (250)
T 2d4z_A 94 NGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLTL 173 (250)
T ss_dssp -------------------------------------------------------------------------CCSCCBH
T ss_pred ccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccCh
Confidence 000 000
Q ss_pred HHH-----HhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhhC
Q 010368 443 HQA-----LQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLLG 512 (512)
Q Consensus 443 ~~~-----l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll~ 512 (512)
.+. .......+....+|...++++.++++|.+|..+|...|++++||++ .|+++||||+.||+++|.+
T Consensus 174 ~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~--~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 174 EEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS--MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred hhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE--CCEEEEEEEHHHHHHHHHH
Confidence 000 0000000001125788899999999999999999999999999998 6999999999999999864
No 59
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.61 E-value=7e-16 Score=140.34 Aligned_cols=157 Identities=19% Similarity=0.268 Sum_probs=113.3
Q ss_pred HHHHHHHHHHhhhCcccccCCCCCcEEEEeCCCCHHHHHHHHHHcCCcEeeeecCCCCeEEEeeeHHHHHHHHHHhhcCC
Q 010368 174 QVSRHRVSVFLSTHTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHG 253 (512)
Q Consensus 174 ~~~~~~~~~fl~~~~~yd~~p~s~kvv~ld~~~~v~~A~~~l~e~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~ 253 (512)
+..++.+...|++..+.|+|- .+++++.++.|+.+|++.|.+++++++||+|. .++++|++|..|+++.+......
T Consensus 5 ~~~~~~~~~~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~~~~~~- 80 (170)
T 4esy_A 5 QARRRAIARAIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSIPFWIY- 80 (170)
T ss_dssp HHHHHHHHHHHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTCCTTHH-
T ss_pred HHHHHHHHHHHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHhhcccc-
Confidence 345677788899999999994 57999999999999999999999999999996 47899999999997643110000
Q ss_pred CCCChhhHhh-hhHHHHHHhhhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEE
Q 010368 254 SNLTEEELET-HTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLH 332 (512)
Q Consensus 254 ~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvG 332 (512)
...+.+.. ............ .....++.+|.++++++.+++++.+|+++|.+++++++||++ +| +++|
T Consensus 81 --~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd----~g---~lvG 149 (170)
T 4esy_A 81 --EASEILSRAIPAPEVEHLFET--GRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ----DG---VPVG 149 (170)
T ss_dssp --HHHHHHTTTSCHHHHHHHHHH--HTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE----TT---EEEE
T ss_pred --chhhhhhhccchhhHHhhhcc--ccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE----CC---EEEE
Confidence 00000000 000000000000 001123446899999999999999999999999999999994 24 8999
Q ss_pred eeehhhHHHHHHh
Q 010368 333 IASLSGILKCVCR 345 (512)
Q Consensus 333 iis~~dIl~~l~~ 345 (512)
+||.+||++++..
T Consensus 150 ivt~~Dil~~l~~ 162 (170)
T 4esy_A 150 IVTRRDLLKLLLL 162 (170)
T ss_dssp EEEHHHHTTTSCC
T ss_pred EEEHHHHHHHHHh
Confidence 9999999987654
No 60
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.60 E-value=9.1e-15 Score=133.32 Aligned_cols=122 Identities=13% Similarity=0.145 Sum_probs=103.2
Q ss_pred CCCCCcCC--CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCccccc
Q 010368 281 DSHGKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILK 358 (512)
Q Consensus 281 ~~~g~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~ 358 (512)
..++.+|. .+++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+|+++.+.... .
T Consensus 42 ~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~~----------~ 106 (172)
T 3lhh_A 42 RTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCR--NNVD---DMVGIISAKQLLSESIAGE----------R 106 (172)
T ss_dssp -CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEES--SSTT---SEEEEEEHHHHHHHHHTTC----------C
T ss_pred CCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---eEEEEEEHHHHHHHHhhcC----------c
Confidence 34566787 7899999999999999999999999999994 3324 7999999999998765320 2
Q ss_pred CccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 359 LPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 359 ~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
.+++++ | ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||+..+...
T Consensus 107 ~~v~~i------------m-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 107 LELVDL------------V-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp CCGGGG------------C-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTT
T ss_pred ccHHHH------------h-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCC
Confidence 234444 8 8899999999999999999999999999999999999999999999876543
No 61
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.60 E-value=2.6e-15 Score=138.02 Aligned_cols=124 Identities=13% Similarity=0.243 Sum_probs=100.7
Q ss_pred cCCCCCCC----ceee--cCCCCHHHHHHHHHhcCCCEEEEE--CCCCcEEEEEeHHHHHHHHhccccccc---------
Q 010368 373 IGEPNRRP----LAML--RPSASLSAALNLLVQAQVSSIPIV--DDNDSLLDIYCRSDITALAKDKAYAHI--------- 435 (512)
Q Consensus 373 v~~~m~~~----~~~v--~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~liGivs~~Di~~~~~~~~~~~l--------- 435 (512)
++++|.+. ++++ .+++++.+|+++|.+++++++||+ |++|+++|+|+..|++...........
T Consensus 13 v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~ 92 (185)
T 2j9l_A 13 AMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIY 92 (185)
T ss_dssp HHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEE
T ss_pred HHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccccceee
Confidence 34447665 7788 999999999999999999999999 788999999999999986543210000
Q ss_pred -----------CcccccHHHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehH
Q 010368 436 -----------NLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLS 504 (512)
Q Consensus 436 -----------~~~~~~v~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~ 504 (512)
.....++.+ +|.+++.+|.+++++.+|+++|.+++++++||+| +|+++|+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~v~~-------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~ 157 (185)
T 2j9l_A 93 FTEHSPPLPPYTPPTLKLRN-------------ILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH--NGRLLGIITKK 157 (185)
T ss_dssp CSSSCCCCCTTCCCCEECGG-------------GEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHH
T ss_pred cccCCcccccccccCccHHH-------------hhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE--CCEEEEEEEHH
Confidence 011233444 4467899999999999999999999999999999 69999999999
Q ss_pred HHHHHhh
Q 010368 505 DIFKFLL 511 (512)
Q Consensus 505 DIl~~ll 511 (512)
||++++.
T Consensus 158 dll~~l~ 164 (185)
T 2j9l_A 158 DVLKHIA 164 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 62
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.60 E-value=1.2e-14 Score=128.84 Aligned_cols=120 Identities=12% Similarity=0.143 Sum_probs=102.0
Q ss_pred CCCCcCCC--CceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccC
Q 010368 282 SHGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKL 359 (512)
Q Consensus 282 ~~g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~ 359 (512)
.++.+|.+ +++++.+++++.+|+++|.+++++++||++ .+.| +++|++|.+|+++.+.... ..
T Consensus 24 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~~----------~~ 88 (148)
T 3lv9_A 24 KIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCR--KNKD---DILGFVHIRDLYNQKINEN----------KI 88 (148)
T ss_dssp BGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEES--SSTT---SEEEEEEHHHHHHHHHHHS----------CC
T ss_pred CHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHhcCC----------Cc
Confidence 34556777 899999999999999999999999999994 3324 7999999999998776431 22
Q ss_pred ccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 360 PICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 360 ~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
+++ ++| +++.++.+++++.+|+++|.+++.+.+||+|++|+++|+||+.|+++.+..
T Consensus 89 ~v~------------~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 89 ELE------------EIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp CGG------------GTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred cHH------------Hhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 333 348 788999999999999999999999999999999999999999999986643
No 63
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.59 E-value=7.8e-15 Score=125.22 Aligned_cols=115 Identities=21% Similarity=0.349 Sum_probs=99.5
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
+|.++++++.+++++.+|++.|.+++++.+||++ ++| +++|+++..|+++++... ..+++
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~G~vt~~dl~~~~~~~-----------~~~v~--- 65 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNINHLPIVD---EHG---KLVGIITSWDIAKALAQN-----------KKTIE--- 65 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEEC---TTS---BEEEEECHHHHHHHHHTT-----------CCBGG---
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEEC---CCC---CEEEEEEHHHHHHHHHhc-----------ccCHH---
Confidence 5788999999999999999999999999999994 234 899999999999877642 11333
Q ss_pred CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 366 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 366 ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+||.+|+++.+.+
T Consensus 66 ---------~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 66 ---------EIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ---------GTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred ---------HHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 3477888999999999999999999999999999988999999999999987643
No 64
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.58 E-value=5.6e-15 Score=132.65 Aligned_cols=119 Identities=16% Similarity=0.200 Sum_probs=97.4
Q ss_pred CCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCc
Q 010368 288 PRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVG 367 (512)
Q Consensus 288 ~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig 367 (512)
..+++++.+++|+.+|+++|.+++++++||+| .+ | +++|++|.+|+++++....... ......+
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd--~~-~---~lvGiit~~Di~~~~~~~~~~~---~~~~~~~------- 87 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVT--DE-K---QFVGTIGLRDIMAYQMEHDLSQ---EIMADTD------- 87 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEEC--C--C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTSB-------
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEc--CC-C---cEEEEEEecchhhhhhhccccc---ccccccC-------
Confidence 46899999999999999999999999999994 33 4 8999999999998886542110 0111223
Q ss_pred ccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 368 TWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 368 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
++++|.+++.++.+++++.+|+++|.+++ .+||+|++|+++|+||++||++.+..
T Consensus 88 -----v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 88 -----IVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp -----GGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred -----HHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHH
Confidence 44559999999999999999999998766 49999999999999999999987643
No 65
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.58 E-value=1.3e-14 Score=125.73 Aligned_cols=119 Identities=10% Similarity=0.131 Sum_probs=99.4
Q ss_pred CCCcCC--CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCc
Q 010368 283 HGKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 360 (512)
Q Consensus 283 ~g~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~ 360 (512)
++.+|. .+++++.+++++.+|+++|.+++++++||++ .+.| +++|++|.+|+++.+.... ...+
T Consensus 8 v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~~Givt~~dl~~~~~~~~---------~~~~ 73 (130)
T 3i8n_A 8 VTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYS--EQKD---NIIGFVHRLELFKMQQSGS---------GQKQ 73 (130)
T ss_dssp CTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEES--SSTT---CEEEECCHHHHHHHHHTTT---------TTSB
T ss_pred HhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---cEEEEEEHHHHHHHHhcCC---------CcCC
Confidence 455676 5678999999999999999999999999994 3424 8999999999998776431 1233
Q ss_pred cccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 010368 361 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 428 (512)
Q Consensus 361 v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~ 428 (512)
++++ | +++.++.+++++.+|+++|.+++.+.+||+|++|+++|+||++|+++.+.
T Consensus 74 v~~~------------m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 74 LGAV------------M-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp HHHH------------S-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HHHH------------h-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 4444 6 45789999999999999999999999999999999999999999998653
No 66
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.57 E-value=7.6e-15 Score=127.35 Aligned_cols=116 Identities=12% Similarity=0.132 Sum_probs=96.5
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcc
Q 010368 289 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 368 (512)
Q Consensus 289 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~ 368 (512)
++++++.+++++.+|+++|.+++++++||++ .+.| +++|++|.+|+++++.... .....+++++
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~--~~~~---~lvGivt~~dl~~~~~~~~-------~~~~~~v~~~---- 75 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYR--DSLD---DAISMLRVREAYRLMTEKK-------EFTKEIMLRA---- 75 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEES--SSGG---GEEEEEEHHHHHHHHTSSS-------CCCHHHHHHH----
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEc--CCCC---cEEEEEEHHHHHHHHhccC-------ccchhhHHHh----
Confidence 4789999999999999999999999999994 3334 8999999999998775421 0011233333
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 369 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 369 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
| +++.++.+++++.+|+++|.+++.+.+||+|++|+++|+||.+|+++.+..
T Consensus 76 --------m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 76 --------A-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp --------S-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred --------c-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 6 567899999999999999999999999999999999999999999986654
No 67
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.57 E-value=9.4e-15 Score=126.47 Aligned_cols=115 Identities=11% Similarity=0.193 Sum_probs=94.9
Q ss_pred cCC--CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 286 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 286 ~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+|. .+++++.+++++.+|+++|.+++++++||++ .+.| +++|++|.+|+++++... ..++++
T Consensus 10 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~~Givt~~dl~~~~~~~-----------~~~v~~ 73 (129)
T 3jtf_A 10 IMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYE--DDRD---NIIGILLAKDLLRYMLEP-----------ALDIRS 73 (129)
T ss_dssp HCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEES--SSTT---CEEEEEEGGGGGGGGTCT-----------TSCGGG
T ss_pred hCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCC---cEEEEEEHHHHHhHhccC-----------CcCHHH
Confidence 455 6789999999999999999999999999994 3324 799999999998654310 223333
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 364 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
+ |. ++.++.+++++.+|+++|.+++.+.+||+|++|+++|+||++|+++.+..
T Consensus 74 ~------------m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 74 L------------VR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp G------------CB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred H------------hC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 3 64 47899999999999999999999999999998999999999999986543
No 68
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.57 E-value=7.7e-15 Score=126.71 Aligned_cols=119 Identities=18% Similarity=0.251 Sum_probs=100.3
Q ss_pred CCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 284 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 284 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+.+|.+++.++.+++++.+|++.|.+++++.+||++ . | +++|++|.+|+++.+.... ....+
T Consensus 8 ~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~--~---~~~Givt~~dl~~~~~~~~--------~~~~~--- 69 (128)
T 3gby_A 8 SYLAETDYPVFTLGGSTADAARRLAASGCACAPVLD--G--E---RYLGMVHLSRLLEGRKGWP--------TVKEK--- 69 (128)
T ss_dssp GGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE--T--T---EEEEEEEHHHHHTTCSSSC--------CTTCB---
T ss_pred HHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE--C--C---EEEEEEEHHHHHHHHhhCC--------cccCc---
Confidence 456889999999999999999999999999999995 2 4 8999999999986443210 00122
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 364 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
++++|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+||++|+++.+.+
T Consensus 70 ---------v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 70 ---------LGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ---------CCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred ---------HHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 344488889999999999999999999999999999999999999999999987653
No 69
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.56 E-value=2.3e-14 Score=124.33 Aligned_cols=121 Identities=21% Similarity=0.314 Sum_probs=102.3
Q ss_pred CCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccc
Q 010368 283 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 362 (512)
Q Consensus 283 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~ 362 (512)
++.+|.++++++.+++++.+|++.|.+++++.+||++ +| +++|+++..|+++++..... ...++
T Consensus 6 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~~~v- 69 (133)
T 2ef7_A 6 VKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LETKA- 69 (133)
T ss_dssp GGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TTCBG-
T ss_pred HHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------cccCH-
Confidence 3456788899999999999999999999999999994 34 89999999999987764311 12233
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 363 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
+++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++...+.
T Consensus 70 -----------~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 70 -----------EEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp -----------GGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred -----------HHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 344877889999999999999999999999999999899999999999999876543
No 70
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.55 E-value=3.1e-14 Score=124.95 Aligned_cols=119 Identities=17% Similarity=0.287 Sum_probs=99.2
Q ss_pred CCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 284 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 284 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+.+|.++++++.+++++.+|++.|.+++++.+||+|. ++ ..+++|++|..|+++++..... ...++.+
T Consensus 8 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~--~~~~~Givt~~dl~~~~~~~~~--------~~~~v~~ 75 (141)
T 2rih_A 8 SELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR--DN--PKRPVAVVSERDILRAVAQRLD--------LDGPAMP 75 (141)
T ss_dssp GGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET--TE--EEEEEEEEEHHHHHHHHHTTCC--------TTSBSGG
T ss_pred HHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC--CC--cceeEEEEEHHHHHHHHhcCCC--------CCCCHHH
Confidence 4468889999999999999999999999999999962 21 0159999999999987754210 1233444
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 364 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
+|.+++.++.++ ++.+|+++|.+++.+.+||+|++|+++|+||.+||++..
T Consensus 76 ------------~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 76 ------------IANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp ------------GCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred ------------HcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 488899999999 999999999999999999999899999999999998643
No 71
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.55 E-value=1.9e-14 Score=123.20 Aligned_cols=118 Identities=17% Similarity=0.282 Sum_probs=99.4
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
+|.++++++.+++++.+|++.|.+++++.+||+| +| +++|+++.+|+++++..... ....+++++
T Consensus 6 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~-------~~~~~v~~~- 70 (125)
T 1pbj_A 6 VMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDD-------LAEVKVWEV- 70 (125)
T ss_dssp HCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCC-------TTTSBHHHH-
T ss_pred hcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCc-------ccccCHHHH-
Confidence 4678999999999999999999999999999994 34 89999999999987764311 113344444
Q ss_pred CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 366 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 366 ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
|.+++.++.+++++.+|++.|.+++.+++||+|+ |+++|++|.+|+++.+.++
T Consensus 71 -----------m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 71 -----------MERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMAK 123 (125)
T ss_dssp -----------CBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC--
T ss_pred -----------cCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 7788999999999999999999999999999997 9999999999999876543
No 72
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.54 E-value=9.7e-15 Score=144.39 Aligned_cols=116 Identities=15% Similarity=0.251 Sum_probs=103.2
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHH
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 446 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l 446 (512)
+++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|+||.+|++... ...++.++|
T Consensus 138 ~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~----------~~~~v~~im 207 (286)
T 2oux_A 138 TAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND----------DDTLIADIL 207 (286)
T ss_dssp BHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC----------TTSBHHHHS
T ss_pred HHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC----------CCCcHHHHc
Confidence 34455988999999999999999999987 889999999999999999999997631 235788877
Q ss_pred hcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 447 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++++|.+++++.+|++.|.+++++++||||+ +|+++|+||..||++++.
T Consensus 208 -------------~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 208 -------------NERVISVHVGDDQEDVAQTIRDYDFLAVPVTDY-DDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp -------------BSCCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred -------------CCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 668899999999999999999999999999996 899999999999998864
No 73
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.54 E-value=1e-14 Score=127.55 Aligned_cols=117 Identities=9% Similarity=0.097 Sum_probs=95.8
Q ss_pred cCC--CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 286 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 286 ~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+|. .+++++.+++++.+|+++|.+++++++||++ .+.| +++|++|.+|+++++.... ....++
T Consensus 8 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~---~~vGivt~~dl~~~~~~~~--------~~~~~v-- 72 (136)
T 3lfr_A 8 IMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIG--ESHD---DVLGVLLAKDLLPLILKAD--------GDSDDV-- 72 (136)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGGGSSS--------GGGCCG--
T ss_pred ccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHHhcc--------CCCcCH--
Confidence 455 6789999999999999999999999999994 3324 7999999999987654210 112233
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 010368 364 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 428 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~ 428 (512)
+++|.+ +.++.+++++.+|+++|.+++++.+||+|++|+++|+||++|+++.+.
T Consensus 73 ----------~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 73 ----------KKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp ----------GGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred ----------HHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 344754 889999999999999999999999999999999999999999997543
No 74
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.54 E-value=9.8e-15 Score=125.94 Aligned_cols=115 Identities=12% Similarity=0.162 Sum_probs=95.1
Q ss_pred cCC--CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 286 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 286 ~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+|. .+++++.+++++.+|++.|.+++++++||++ .+.| +++|++|.+|+++.+.... ...++++
T Consensus 8 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~---~~vGivt~~dl~~~~~~~~---------~~~~v~~ 73 (127)
T 3nqr_A 8 IMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVIS--EDKD---HIEGILMAKDLLPFMRSDA---------EAFSMDK 73 (127)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGGSTTC---------CCCCHHH
T ss_pred hcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHhccC---------CCCCHHH
Confidence 455 3489999999999999999999999999994 3424 7999999999987554211 1233444
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 364 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
+ |. ++.++.+++++.+|+++|.+++++.+||+|++|+++|+||++|+++.+
T Consensus 74 ~------------m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 74 V------------LR-TAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp H------------CB-CCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred H------------cC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 4 74 467899999999999999999999999999999999999999998754
No 75
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.53 E-value=1.7e-14 Score=141.99 Aligned_cols=116 Identities=17% Similarity=0.283 Sum_probs=101.2
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHH
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 446 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l 446 (512)
.++++|.++++++.+++++.+|++.|.++ +++++||+|++|+++|+|+.+|++... ...++.++|
T Consensus 136 ~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----------~~~~v~~im 205 (278)
T 2yvy_A 136 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAEIM 205 (278)
T ss_dssp BGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC----------TTCBSTTTS
T ss_pred hHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC----------CCCcHHHHh
Confidence 34555988999999999999999999987 789999999999999999999998631 124566655
Q ss_pred hcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 447 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+++++|++++++.+|++.|.+++++.+||||+ +|+++|+||..||++.+.
T Consensus 206 -------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 206 -------------NPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp -------------BSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHC-
T ss_pred -------------CCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC-CCeEEEEEEHHHHHHHHH
Confidence 678999999999999999999999999999996 899999999999999864
No 76
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.53 E-value=2.3e-14 Score=127.89 Aligned_cols=117 Identities=10% Similarity=0.124 Sum_probs=99.5
Q ss_pred cCCC--CceEeCCCCCHHHHHHHHHhCCCceeeEE-ecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccc
Q 010368 286 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPII-HSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 362 (512)
Q Consensus 286 ~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVv-d~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~ 362 (512)
+|.+ +++++.+++++.+|+++|.+++++++||+ + .+.| +++|++|.+|+++++.... ..+++
T Consensus 25 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d--~~~~---~lvGivt~~dl~~~~~~~~----------~~~v~ 89 (153)
T 3oco_A 25 VMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTAD--NDKD---KIIGYAYNYDIVRQARIDD----------KAKIS 89 (153)
T ss_dssp HSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEET--TEEE---EEEEEEEHHHHHHHHHHHT----------TSBGG
T ss_pred EecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEEC--CCCC---cEEEEEEHHHHHhHHhcCC----------CCcHH
Confidence 4654 89999999999999999999999999999 4 1224 8999999999998776431 22333
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 363 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
++| +++.++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+...
T Consensus 90 ------------~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 90 ------------TIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp ------------GTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-
T ss_pred ------------HHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhcc
Confidence 448 7899999999999999999999999999999999999999999999876654
No 77
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.53 E-value=3.9e-14 Score=126.93 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=97.0
Q ss_pred cCCCCCcCCC--CceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccc
Q 010368 280 IDSHGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPIL 357 (512)
Q Consensus 280 ~~~~g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l 357 (512)
...++.+|.+ +++++.+++++.+|+++|.+++++++||++ .+.+ +++|++|.+|+++++... .
T Consensus 37 ~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~dl~~~~~~~----------~ 101 (156)
T 3oi8_A 37 DLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIG--EDKD---EVLGILHAKDLLKYMFNP----------E 101 (156)
T ss_dssp TCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTT---CEEEEEEGGGGGGGSSCG----------G
T ss_pred CCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCC---cEEEEEEHHHHHHHHHcC----------C
Confidence 3345667875 799999999999999999999999999994 3334 799999999998654321 1
Q ss_pred cCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHH
Q 010368 358 KLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDIT 424 (512)
Q Consensus 358 ~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~ 424 (512)
..+++++ |.+ +.++.+++++.+|+++|.+++.+.+||+|++|+++|+||+.||+
T Consensus 102 ~~~v~~i------------m~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 102 QFHLKSI------------LRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp GCCHHHH------------CBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred cccHHHH------------cCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 2334444 754 78999999999999999999999999999999999999999985
No 78
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.53 E-value=5.2e-14 Score=122.77 Aligned_cols=120 Identities=17% Similarity=0.366 Sum_probs=100.0
Q ss_pred CCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhH-HHHHHhhcccCCCCcccccCccc
Q 010368 284 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGI-LKCVCRYFRHCSSSLPILKLPIC 362 (512)
Q Consensus 284 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dI-l~~l~~~~~~~~~~~~~l~~~v~ 362 (512)
+.+|.++++++.+++++.+|++.|.+++++.+||++ ++ | +++|+++..|+ ++++.... ....+++
T Consensus 11 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~-~---~~~Givt~~dl~~~~~~~~~--------~~~~~v~ 76 (138)
T 2p9m_A 11 KDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVID--DE-N---KVIGIVTTTDIGYNLIRDKY--------TLETTIG 76 (138)
T ss_dssp GGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEEC--TT-C---BEEEEEEHHHHHHHHTTTCC--------CSSCBHH
T ss_pred HHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEEC--CC-C---eEEEEEEHHHHHHHHHhhcc--------cCCcCHH
Confidence 446788999999999999999999999999999994 33 4 89999999999 87654311 1133444
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcC-----CCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 363 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQ-----VSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~-----~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
++ |.+++.++.+++++.+|++.|.+++ ++++||+|++|+++|+||.+|+++...+
T Consensus 77 ~~------------m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 77 DV------------MTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp HH------------SCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HH------------hCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 44 8888899999999999999999999 9999999989999999999999986543
No 79
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.53 E-value=6.5e-15 Score=162.97 Aligned_cols=82 Identities=12% Similarity=0.197 Sum_probs=69.2
Q ss_pred CCCceeeEEEEecC--CCcEEEEEEccCCCCCC-CCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEe--eCCCCC---
Q 010368 21 PDTVLIPMRFVWPY--GGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWR--HDEHQP--- 92 (512)
Q Consensus 21 ~~~~~~~~~f~w~~--~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~--~d~~~~--- 92 (512)
.....++|+|+++. +|++|+|+||||+|++. .+|.+. +|.|++++.||||+|||||+|||+|+ +||++|
T Consensus 13 ~~~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~~---~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~ 89 (696)
T 4aee_A 13 GRKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKI---EEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKK 89 (696)
T ss_dssp TEEEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEEE---TTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCCEE
T ss_pred CCCCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEec---CCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCccc
Confidence 34456777777554 78999999999999774 577653 79999999999999999999999999 778776
Q ss_pred eeeCCCCCeeeEE
Q 010368 93 FISSEYGIVNTVL 105 (512)
Q Consensus 93 ~~~d~~G~~nn~~ 105 (512)
++.|++|+.|++.
T Consensus 90 y~~~~~g~~n~~~ 102 (696)
T 4aee_A 90 CVHTSFFPEYKKC 102 (696)
T ss_dssp EEECSSCTTSEEE
T ss_pred ccccCCcccccee
Confidence 4789999999995
No 80
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.52 E-value=9.6e-14 Score=121.17 Aligned_cols=122 Identities=16% Similarity=0.316 Sum_probs=100.6
Q ss_pred CCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccc
Q 010368 283 HGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 362 (512)
Q Consensus 283 ~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~ 362 (512)
++.+|.++++++.+++++.+|++.|.+++++.+||+| + +| +++|++|..|+++.+.... .....+
T Consensus 9 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~-~~---~~~Givt~~dl~~~~~~~~-------~~~~~~-- 73 (138)
T 2yzi_A 9 IKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIN--D-DG---NVVGFFTKSDIIRRVIVPG-------LPYDIP-- 73 (138)
T ss_dssp GGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEEC--T-TS---CEEEEEEHHHHHHHTTTTC-------CCTTSB--
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc--C-CC---cEEEEEeHHHHHHHHHhcC-------CcccCC--
Confidence 4556888999999999999999999999999999994 2 34 8999999999974332210 011223
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 363 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
++++|.+++.++.+++++.+|+++|.+++++++ |+|++|+++|+||.+||++.....
T Consensus 74 ----------v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 74 ----------VERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp ----------GGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCC
T ss_pred ----------HHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHH
Confidence 344488889999999999999999999999999 999899999999999999877654
No 81
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.52 E-value=1.4e-13 Score=125.65 Aligned_cols=123 Identities=7% Similarity=0.088 Sum_probs=101.9
Q ss_pred cCCCCCcCC--CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccc
Q 010368 280 IDSHGKAFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPIL 357 (512)
Q Consensus 280 ~~~~g~~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l 357 (512)
...++.+|. ++++++.+++++.+|+++|.+++++++||++ .+.+ +++|+++.+||++++....
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~---~lvGivt~~Dl~~~~~~~~---------- 99 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCR--GSLD---EVVGIGRAKDLVADLITEG---------- 99 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEES--SSTT---SEEEEEEHHHHHHHHHHHS----------
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEe--CCCC---CEEEEEEHHHHHHHHhcCC----------
Confidence 345667785 5799999999999999999999999999994 3324 7999999999998775421
Q ss_pred cCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhccc
Q 010368 358 KLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKA 431 (512)
Q Consensus 358 ~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~ 431 (512)
..++. + | ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||..||+..+....
T Consensus 100 ~~~v~-~------------~-~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 100 RVRRN-R------------L-RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp SCCGG-G------------S-BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCC
T ss_pred cchhH-h------------c-CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcC
Confidence 11222 2 3 56789999999999999999999999999999999999999999998776543
No 82
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.52 E-value=7.3e-14 Score=125.59 Aligned_cols=127 Identities=19% Similarity=0.281 Sum_probs=101.7
Q ss_pred CCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCC-CcccccCccc
Q 010368 284 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS-SLPILKLPIC 362 (512)
Q Consensus 284 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~-~~~~l~~~v~ 362 (512)
+.+|.++++++.+++|+.+|+++|.+++++.+||+| . +| +++|++|..||++++...+..... .......+
T Consensus 8 ~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd--~-~~---~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~-- 79 (160)
T 2o16_A 8 EDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD--A-NK---KLLGIVSQRDLLAAQESSLQRSAQGDSLAFETP-- 79 (160)
T ss_dssp GGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC--T-TC---BEEEEEEHHHHHHHHHHHCC---------CCCB--
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc--C-CC---cEEEEEeHHHHHHHHHHhhcccccccchhcccC--
Confidence 456788999999999999999999999999999994 2 34 899999999999887654321000 00011223
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 363 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
++++|.++++++.+++++.+|+++|.+++++++||+|+ |+++|+||.+||++....
T Consensus 80 ----------v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 80 ----------LFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp ----------HHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred ----------HHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 34448889999999999999999999999999999997 999999999999986543
No 83
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.51 E-value=1.3e-13 Score=122.19 Aligned_cols=120 Identities=16% Similarity=0.220 Sum_probs=97.2
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcc
Q 010368 289 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 368 (512)
Q Consensus 289 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~ 368 (512)
.+++++.+++++.+|++.|.+++++++||+| .+ | +++|++|..||++++....... .......
T Consensus 25 ~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd--~~-~---~~~Givt~~dl~~~~~~~~~~~--~~~~~~~--------- 87 (150)
T 3lqn_A 25 EKVAHVQIGNGLEHALLVLVKSGYSAIPVLD--PM-Y---KLHGLISTAMILDGILGLERIE--FERLEEM--------- 87 (150)
T ss_dssp GGSCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TT-C---BEEEEEEHHHHHHHTBCSSSBC--GGGGGGC---------
T ss_pred CceEEECCCCcHHHHHHHHHHcCCcEEEEEC--CC-C---CEEEEEEHHHHHHHHHhhcccc--hhHHhcC---------
Confidence 5699999999999999999999999999994 33 4 8999999999998775321100 0001112
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 369 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 369 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
.++++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|+||.+||++.+.+.
T Consensus 88 ---~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 88 ---KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp ---BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred ---CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHH
Confidence 3455588899999999999999999999886 99999999999999999999876553
No 84
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.51 E-value=9.4e-14 Score=124.67 Aligned_cols=120 Identities=15% Similarity=0.265 Sum_probs=98.7
Q ss_pred CCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 284 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 284 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+.+|.++ +++.+++++.+|+++|.+++++.+||+| ++ | +++|++|.+||++.+.... .....++.
T Consensus 20 ~~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd--~~-~---~~~Givt~~dl~~~~~~~~-------~~~~~~v~- 84 (159)
T 3fv6_A 20 KDFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVD--RD-A---VLVGVLSRKDLLRASIGQQ-------ELTSVPVH- 84 (159)
T ss_dssp GGSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEEC--TT-S---CEEEEEEHHHHHHHHTSCS-------CTTTCBGG-
T ss_pred HHHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEc--CC-C---cEEEEEeHHHHHHHhhccC-------cccCcCHH-
Confidence 4467664 5999999999999999999999999994 33 4 8999999999998764321 11123343
Q ss_pred ccCcccccccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCC---cEEEEEeHHHHHHHHhc
Q 010368 364 IPVGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDND---SLLDIYCRSDITALAKD 429 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g---~liGivs~~Di~~~~~~ 429 (512)
++|.+ ++.++.+++++.+|+++|.+++++++||+|++| +++|+||.+||++.+.+
T Consensus 85 -----------~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 85 -----------IIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp -----------GTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred -----------HHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 44776 889999999999999999999999999999888 99999999999986643
No 85
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.50 E-value=2.5e-13 Score=121.55 Aligned_cols=134 Identities=13% Similarity=0.194 Sum_probs=101.2
Q ss_pred CCcCCCCceEeCCCCCHHHHHHHHHhCCCce-eeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccc
Q 010368 284 GKAFPRPLVYAGPNDNLKDVARKILHNEVAT-VPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 362 (512)
Q Consensus 284 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~-lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~ 362 (512)
+.+|.++++++.+++++.+|+++|.+++++. +||+|. + +++|++|..||++++...+.........+.....
T Consensus 19 ~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~---~----~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 91 (157)
T 1o50_A 19 CKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD---N----KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMK 91 (157)
T ss_dssp TTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET---T----EEEEEEEHHHHHHHHHHHHHCCCC-------CCC
T ss_pred hhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC---C----EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHH
Confidence 4578899999999999999999999999999 999952 1 6999999999998765321000000000000000
Q ss_pred cccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 363 AIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
......++++|.+ ++++.+++++.+|+++|.+++++++||+|++|+++|+||++||++.+.+
T Consensus 92 ----~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 92 ----RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp ----CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred ----HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 0011234455888 9999999999999999999999999999988999999999999987654
No 86
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=2.3e-13 Score=122.95 Aligned_cols=117 Identities=14% Similarity=0.268 Sum_probs=99.1
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcc
Q 010368 289 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 368 (512)
Q Consensus 289 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~ 368 (512)
.+++++.+++++.+|+++|.+++++.+||+| .+ | +++|++|..||++++...... ....++.
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd--~~-~---~~~Givt~~dl~~~~~~~~~~------~~~~~v~------ 96 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTD--AD-G---VVLGIFTERDLVKAVAGQGAA------SLQQSVS------ 96 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEEC--TT-S---CEEEEEEHHHHHHHHHHHGGG------GGTSBGG------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEc--CC-C---eEEEEEEHHHHHHHHHhcCCc------cccCCHH------
Confidence 4789999999999999999999999999994 33 4 899999999999988764211 1123344
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 369 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 369 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
++|.+++.++.+++++.+|+++|.+++++++||+|+ |+++|+||..||++.....
T Consensus 97 ------~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 97 ------VAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp ------GTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred ------HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 448888999999999999999999999999999998 9999999999999876543
No 87
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.49 E-value=1.6e-13 Score=135.05 Aligned_cols=132 Identities=15% Similarity=0.252 Sum_probs=108.9
Q ss_pred HHHHhhhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhC-----CCceeeEEecCCCCCCcCeEEEeeehhhHHHH
Q 010368 268 AWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGILKC 342 (512)
Q Consensus 268 ~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~-----~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~ 342 (512)
+...+...+.+....+|.+|.++++++.+++++.+|++.|.++ +++++||++ .+ | +++|++|.+|++..
T Consensus 122 ~~~~i~~~l~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd--~~-~---~lvGivt~~dll~~ 195 (278)
T 2yvy_A 122 TRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVD--EK-G---RLKGVLSLRDLIVA 195 (278)
T ss_dssp HHHHHHHHHHSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEEC--TT-C---BEEEEEEHHHHHHS
T ss_pred HHHHHHHHHCCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEEC--CC-C---CEEEEEEHHHHhcC
Confidence 3344455566777788999999999999999999999999987 799999994 33 4 89999999999742
Q ss_pred HHhhcccCCCCcccccCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHH
Q 010368 343 VCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSD 422 (512)
Q Consensus 343 l~~~~~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~D 422 (512)
. ... +++++|.++++++.+++++.+|+++|.+++.+.+||+|++|+++|+||..|
T Consensus 196 ~-------------~~~------------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~D 250 (278)
T 2yvy_A 196 D-------------PRT------------RVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDD 250 (278)
T ss_dssp C-------------TTC------------BSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHH
T ss_pred C-------------CCC------------cHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHH
Confidence 0 122 344558888999999999999999999999999999999999999999999
Q ss_pred HHHHHhcc
Q 010368 423 ITALAKDK 430 (512)
Q Consensus 423 i~~~~~~~ 430 (512)
++..+...
T Consensus 251 il~~i~~e 258 (278)
T 2yvy_A 251 VLDVLEAE 258 (278)
T ss_dssp HHHHC---
T ss_pred HHHHHHHH
Confidence 99866543
No 88
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.49 E-value=1.1e-13 Score=120.49 Aligned_cols=115 Identities=16% Similarity=0.320 Sum_probs=96.5
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcc
Q 010368 289 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 368 (512)
Q Consensus 289 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~ 368 (512)
++++++.+++++.+|++.|.+++++.+||++ +| +++|+++..|+++.+..... .....+
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~~~~~~-------- 75 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------PVKDTQ-------- 75 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------CGGGSB--------
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------CcccCC--------
Confidence 7899999999999999999999999999994 34 89999999999865443210 011223
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 369 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 369 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
++++|.+++.++.+++++.+|+++|.+++++++||+| +|+++|+||.+|+++...+
T Consensus 76 ----v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 76 ----VKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ----GGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ----HHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 4445888999999999999999999999999999999 7999999999999987654
No 89
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.49 E-value=1.1e-13 Score=122.79 Aligned_cols=116 Identities=16% Similarity=0.227 Sum_probs=98.1
Q ss_pred CCcCCC--CceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcc
Q 010368 284 GKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI 361 (512)
Q Consensus 284 g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v 361 (512)
+.+|.+ +++++.+++++.+|+++|.+++++.+||+| .+ | +++|++|..||++++.... .....++
T Consensus 31 ~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd--~~-~---~~~Givt~~dl~~~~~~~~-------~~~~~~v 97 (149)
T 3k2v_A 31 NDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD--DD-M---NIIGIFTDGDLRRVFDTGV-------DMRDASI 97 (149)
T ss_dssp GGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC--TT-C---BEEEEEEHHHHHHHHCSSS-------CCTTCBH
T ss_pred HHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC--CC-C---cEEEEecHHHHHHHHhcCC-------CcccCcH
Confidence 446778 899999999999999999999999999994 33 4 8999999999998775421 1123444
Q ss_pred ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH
Q 010368 362 CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITA 425 (512)
Q Consensus 362 ~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~ 425 (512)
+++ |.+++.++.+++++.+|+++|.+++++.+||+|++ +++|+||.+||++
T Consensus 98 ~~~------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 98 ADV------------MTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp HHH------------SEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred HHH------------cCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 444 87888999999999999999999999999999965 9999999999864
No 90
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.49 E-value=1.5e-13 Score=120.57 Aligned_cols=120 Identities=20% Similarity=0.210 Sum_probs=97.3
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
.|.++++++.+++++.+|++.|.+++++.+||++ .+ | +++|+++..|+++++..... .....++.++
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~-~---~~~Givt~~dl~~~~~~~~~------~~~~~~v~~~- 82 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID--EN-G---YLINVYEAYDVLGLIKGGIY------NDLSLSVGEA- 82 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TT-C---BEEEEEEHHHHHHHHHTC----------CCSBHHHH-
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEc--CC-C---cEEEEEcHHHHHHHhccccc------ccCCccHHHH-
Confidence 5778999999999999999999999999999994 33 4 89999999999987754210 0112334443
Q ss_pred CcccccccCCCCCC------CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 366 VGTWVPKIGEPNRR------PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 366 ig~~~~~v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
|.+ ++.++.+++++.+|+++|.+++.+++||+|++|+++|+||.+||++.+..
T Consensus 83 -----------m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 83 -----------LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp -----------HHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred -----------HhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 443 67899999999999999999999999999989999999999999986543
No 91
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.49 E-value=2.5e-13 Score=120.92 Aligned_cols=115 Identities=17% Similarity=0.244 Sum_probs=96.2
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcc
Q 010368 289 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 368 (512)
Q Consensus 289 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~ 368 (512)
++++++.+++++.+|++.|.+++++.+||+| .+ | +++|++|..|+++++..... .....++.++
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~-~---~~vGivt~~dl~~~~~~~~~------~~~~~~v~~~---- 92 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVD--EK-G---RVVDIYSKFDVINLAAEKTY------NNLDVSVTKA---- 92 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEEC--TT-S---BEEEEEEHHHHHHHHHCSSC------CCTTSBGGGG----
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEEC--CC-C---cEEEEEeHHHHHHHhcchhh------hhhcchHHHH----
Confidence 7889999999999999999999999999994 33 4 89999999999987654210 0112333333
Q ss_pred cccccCCCCC------CCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 369 WVPKIGEPNR------RPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 369 ~~~~v~~~m~------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
|. +++.++.+++++.+|+++|.+++++++||+|++|+++|+||.+||++.+
T Consensus 93 --------m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 93 --------LQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp --------GGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred --------HhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 54 6788999999999999999999999999999889999999999999865
No 92
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.49 E-value=8.7e-14 Score=123.13 Aligned_cols=134 Identities=16% Similarity=0.264 Sum_probs=99.3
Q ss_pred CCcCCC--CceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcc
Q 010368 284 GKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPI 361 (512)
Q Consensus 284 g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v 361 (512)
+.+|.+ +++++.+++++.+|++.|.+++++.+||++ .+ | +++|++|..|+++++...... ..+. ..
T Consensus 8 ~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~-~---~~~G~vt~~dl~~~~~~~~~~-----~~~~-~~ 75 (152)
T 4gqw_A 8 GEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVID--ED-W---KLVGLVSDYDLLALDSGDSTW-----KTFN-AV 75 (152)
T ss_dssp GGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEEC--TT-C---BEEEEEEHHHHTTCC----CC-----HHHH-HH
T ss_pred hhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEe--CC-C---eEEEEEEHHHHHHhhcccCcc-----cchH-HH
Confidence 445666 899999999999999999999999999994 33 4 899999999998643321100 0000 00
Q ss_pred ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 362 CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 362 ~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
...........++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+||++.+.+
T Consensus 76 ~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 76 QKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp HTC-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 00000001123444588888999999999999999999999999999999999999999999987654
No 93
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.47 E-value=3.1e-13 Score=130.25 Aligned_cols=210 Identities=11% Similarity=0.154 Sum_probs=128.5
Q ss_pred CcccccCCCCCcEEEEeCCCCHHHHHHHHHHcCCcEeeeecCCCCeEEEeeeHHHHHHHHHHhhcCCCCCChhhHhhhhH
Q 010368 187 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTEEELETHTI 266 (512)
Q Consensus 187 ~~~yd~~p~s~kvv~ld~~~~v~~A~~~l~e~~i~~~pv~d~~~~~~vGilt~~Dii~il~~~~~~~~~~~~~~l~~~~i 266 (512)
.++.|+|- .+++++.++.++.+|++.|.+++++++||+|.+ ++++|++|..|+++.+..... .........+.
T Consensus 7 ~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~----~~~~~~~~~~~ 79 (245)
T 3l2b_A 7 LKVEDLEM--DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWD----SNILAKSATSL 79 (245)
T ss_dssp CBGGGSCC--BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCC----TTHHHHTTCCH
T ss_pred CcHHHhcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhh----hhhhhhccCCH
Confidence 45667774 468899999999999999999999999999964 789999999999987742110 00001111122
Q ss_pred HHHHHhhhhh-ccccC------------------CCCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCC--
Q 010368 267 SAWKEGKAYL-NRQID------------------SHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDG-- 325 (512)
Q Consensus 267 ~~~~~~~~~~-~~~~~------------------~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g-- 325 (512)
..+.+..... -.... .........++.+. .-.++...+.+.+++.+++.....-..
T Consensus 80 ~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvg---dr~~~~~~~i~~~~~~liit~~~~~~~~v 156 (245)
T 3l2b_A 80 DNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAG---DRAEIQAELIELKVSLLIVTGGHTPSKEI 156 (245)
T ss_dssp HHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEEC---SCHHHHHHHHHTTCSEEEECTTCCCCHHH
T ss_pred HHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEEC---CCHHHHHHHHHcCCCEEEECCCCCCCHHH
Confidence 2221111100 00000 00011223344442 237888899999999998883211000
Q ss_pred ----CcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcccccccCCCCC-CCceeecCCCCHHHHHHHHHhc
Q 010368 326 ----SFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNR-RPLAMLRPSASLSAALNLLVQA 400 (512)
Q Consensus 326 ----~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~m~~~ 400 (512)
....+-.+.+..|........ .... .++++|. +++.++.+++++.+|+++|.++
T Consensus 157 ~~~a~~~~~~~i~t~~d~~~~~~~~---------~~~~------------~v~~im~~~~~~~~~~~~~~~~~~~~m~~~ 215 (245)
T 3l2b_A 157 IELAKKNNITVITTPHDSFTASRLI---------VQSL------------PVDYVMTKDNLVAVSTDDLVEDVKVTMSET 215 (245)
T ss_dssp HHHHHHHTCEEEECSSCHHHHHHHG---------GGGS------------BHHHHSBCTTCCCEETTSBHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEeCCChHHHHHHH---------hcCC------------ceeeEecCCccEEECCCCcHHHHHHHHHhc
Confidence 000123344444443322111 0112 2444588 8999999999999999999999
Q ss_pred CCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 401 QVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 401 ~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
+++++||+|++|+++|+||++|+++..
T Consensus 216 ~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 216 RYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp CCSEEEEECTTCBEEEEEECC------
T ss_pred CCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 999999999999999999999998754
No 94
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.47 E-value=3.6e-13 Score=120.19 Aligned_cols=126 Identities=15% Similarity=0.237 Sum_probs=100.3
Q ss_pred CCCcCCC--CceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCc
Q 010368 283 HGKAFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 360 (512)
Q Consensus 283 ~g~~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~ 360 (512)
++.+|.+ +++++.+++++.+|++.|.+++++++||++ . +| +++|++|..|+++++...... ........
T Consensus 13 v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~-~~---~~~Givt~~dl~~~~~~~~~~--~~~~~~~~- 83 (157)
T 2emq_A 13 VKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLD--T-SY---KLHGLISMTMMMDAILGLERI--EFERLETM- 83 (157)
T ss_dssp STTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEEC--T-TC---CEEEEEEHHHHHHHSBCSSSB--CGGGGGTC-
T ss_pred HHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEc--C-CC---CEEEEeeHHHHHHHHhccccc--chHHhcCC-
Confidence 4556765 899999999999999999999999999994 3 34 799999999998866431100 00001112
Q ss_pred cccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 361 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 361 v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
.++++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|+||++||+......
T Consensus 84 -----------~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 84 -----------KVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp -----------BGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred -----------cHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 3455588899999999999999999999887 99999889999999999999876543
No 95
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.47 E-value=1.2e-13 Score=148.00 Aligned_cols=122 Identities=19% Similarity=0.254 Sum_probs=104.5
Q ss_pred cccCCCCCCCceeecCC-CCHHHHHHHHHhcCCCEEEEEC-CCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhc
Q 010368 371 PKIGEPNRRPLAMLRPS-ASLSAALNLLVQAQVSSIPIVD-DNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQL 448 (512)
Q Consensus 371 ~~v~~~m~~~~~~v~~~-~~l~~a~~~m~~~~~~~lpVvd-~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~ 448 (512)
.+|+++|.++++++.++ +++.+|+++|.+++++++||+| ++++++|+||.+||++....+.. ....+|.++|
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~----~~~~~V~~im-- 457 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR----QQSDPAIKAL-- 457 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC----CTTSBGGGGE--
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC----cCCCcHHHHh--
Confidence 35777899999999999 9999999999999999999999 78999999999999976544311 2245777766
Q ss_pred CCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCC---CCeEEEEEehHHHHHHhh
Q 010368 449 GQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAG---SKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 449 ~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~---~~~liGiIS~~DIl~~ll 511 (512)
.+++++|.+++++.+|+++|.++++ +||||++ +|+++||||+.||++++.
T Consensus 458 -----------~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~ 510 (527)
T 3pc3_A 458 -----------NKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIA 510 (527)
T ss_dssp -----------ETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHH
T ss_pred -----------cCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHH
Confidence 6789999999999999999988776 7999951 289999999999999985
No 96
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.47 E-value=3.3e-13 Score=124.23 Aligned_cols=121 Identities=14% Similarity=0.171 Sum_probs=100.9
Q ss_pred CCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 284 GKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 284 g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+.+|.++++++.+++++.+|+++|.+++++++||++ .+ | +++|+++.+||++++..... .....
T Consensus 12 ~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd--~~-g---~~vGivt~~dl~~~~~~~~~------~~~~~---- 75 (184)
T 1pvm_A 12 EKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKD--DN-G---NDVGLLSERSIIKRFIPRNK------KPDEV---- 75 (184)
T ss_dssp GGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEEC--TT-S---CEEEEEEHHHHHHHTGGGCC------CGGGS----
T ss_pred HHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc--CC-C---cEEEEEeHHHHHHHHhhccc------CcccC----
Confidence 446788999999999999999999999999999994 23 4 89999999999987653200 01122
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 010368 364 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 428 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~ 428 (512)
.++++|.+++.++.+++++.+|+++|.+++.+.+||+|++|+++|+||..||++.+.
T Consensus 76 --------~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 76 --------PIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp --------BGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred --------CHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 344458888999999999999999999999999999998899999999999987543
No 97
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.46 E-value=1.5e-13 Score=122.71 Aligned_cols=122 Identities=16% Similarity=0.191 Sum_probs=98.7
Q ss_pred cCC--CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 286 AFP--RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 286 ~~~--~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+|. ++++++.+++++.+|+++|.+++++++||+| . +| +++|++|.+||++++....... ......++
T Consensus 20 im~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd--~-~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~~~v-- 88 (156)
T 3ctu_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT--D-EK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADTDI-- 88 (156)
T ss_dssp GEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEEC--C--C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTSBG--
T ss_pred HcCcccCceEECCCCCHHHHHHHHHHCCCceEeEEC--C-CC---EEEEEEcHHHHHHHHHhccccc---cccccCcH--
Confidence 455 7899999999999999999999999999994 3 34 8999999999998886531100 00112333
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 364 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
+++|.+++.++.+++++.+|+++|.+++ ++||+|++|+++|+||.+|+++...+.
T Consensus 89 ----------~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 89 ----------VHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp ----------GGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHH
T ss_pred ----------HHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 4448888999999999999999998876 799999999999999999999877554
No 98
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.46 E-value=2.7e-13 Score=133.95 Aligned_cols=127 Identities=16% Similarity=0.224 Sum_probs=107.6
Q ss_pred hhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhC-----CCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhc
Q 010368 273 KAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN-----EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYF 347 (512)
Q Consensus 273 ~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~-----~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~ 347 (512)
...++++...+|.+|.++++++.+++++.+|++.|.++ +++++||+| .+ | +++|++|.+|+++.
T Consensus 129 ~~ll~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd--~~-~---~lvGivt~~dll~~----- 197 (286)
T 2oux_A 129 KELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVD--QE-N---HLVGVISLRDLIVN----- 197 (286)
T ss_dssp HHHTTSCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEEC--TT-C---BEEEEEEHHHHTTS-----
T ss_pred HHHhcCChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEc--CC-C---eEEEEEEHHHHHcC-----
Confidence 33456677778899999999999999999999999987 889999994 33 4 89999999999742
Q ss_pred ccCCCCcccccCccccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 348 RHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 348 ~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
....+++++ |.++++++.+++++.+|+++|.+++++++||+|++|+++|+||..|++..+
T Consensus 198 --------~~~~~v~~i------------m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 198 --------DDDTLIADI------------LNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVI 257 (286)
T ss_dssp --------CTTSBHHHH------------SBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred --------CCCCcHHHH------------cCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 012344444 888899999999999999999999999999999999999999999999876
Q ss_pred hcc
Q 010368 428 KDK 430 (512)
Q Consensus 428 ~~~ 430 (512)
...
T Consensus 258 ~~e 260 (286)
T 2oux_A 258 DDE 260 (286)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 99
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.46 E-value=2e-13 Score=122.66 Aligned_cols=124 Identities=13% Similarity=0.160 Sum_probs=96.9
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
+|.++++++.+++++.+|+++|.+++++++||+|. .++| +++|++|..||++++....... ......++.++
T Consensus 18 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~-~~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~~v~~~- 89 (164)
T 2pfi_A 18 FMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES-TESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQCLQDI- 89 (164)
T ss_dssp HCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHC----------CCCCBHHHH-
T ss_pred HcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec-CCCC---EEEEEEEHHHHHHHHHhhcccc---CCcccchhhhh-
Confidence 47788999999999999999999999999999942 1245 8999999999998775432110 01112233333
Q ss_pred CcccccccCCCCCCC------ceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 366 VGTWVPKIGEPNRRP------LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 366 ig~~~~~v~~~m~~~------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
|..+ +.++.+++++.+|+++|.+++.+++||+| +|+++|+||++||++...+
T Consensus 90 -----------m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 90 -----------LARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp -----------HHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred -----------hcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 3333 68899999999999999999999999999 7999999999999986654
No 100
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.46 E-value=5.6e-13 Score=128.70 Aligned_cols=143 Identities=10% Similarity=0.104 Sum_probs=104.5
Q ss_pred CCCCcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCC---------
Q 010368 282 SHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSS--------- 352 (512)
Q Consensus 282 ~~g~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~--------- 352 (512)
.++.+|.++++++.+++++.+|+++|.+++++.+||++. .+++ +++|+|+.+||++++.........
T Consensus 14 ~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~ 89 (250)
T 2d4z_A 14 QVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEAD 89 (250)
T ss_dssp BTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBC
T ss_pred ChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccc
Confidence 356689999999999999999999999999999999952 2234 799999999999887654211000
Q ss_pred ------------------CcccccCc--------------------------------------------------ccc-
Q 010368 353 ------------------SLPILKLP--------------------------------------------------ICA- 363 (512)
Q Consensus 353 ------------------~~~~l~~~--------------------------------------------------v~~- 363 (512)
...++... ...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (250)
T 2d4z_A 90 EEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEE 169 (250)
T ss_dssp CC---------------------------------------------------------------------------CCS
T ss_pred ccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccccc
Confidence 00000000 000
Q ss_pred -cc---Ccc-----ccccc--C-CCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 364 -IP---VGT-----WVPKI--G-EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 364 -l~---ig~-----~~~~v--~-~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
+. +.. ....| . .+|...++++.+++++.+|..+|...|++++||++ .|+++||||++||++++..
T Consensus 170 ~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 170 MLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp CCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 00 000 01122 2 35888899999999999999999999999999997 7999999999999997754
No 101
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.46 E-value=5e-14 Score=122.17 Aligned_cols=116 Identities=16% Similarity=0.285 Sum_probs=96.1
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHH-HHHhhcccCCCCcccccCccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK-CVCRYFRHCSSSLPILKLPICAI 364 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~-~l~~~~~~~~~~~~~l~~~v~~l 364 (512)
+|.++++++.+++++.+|++.|.+++++.+||+| ++ | +++|+++.+|+++ ++.... .....+++++
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~-~---~~~Givt~~dl~~~~~~~~~-------~~~~~~v~~~ 79 (133)
T 1y5h_A 13 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICG--DD-D---RLHGMLTDRDIVIKGLAAGL-------DPNTATAGEL 79 (133)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEEC--GG-G---BEEEEEEHHHHHHTTGGGTC-------CTTTSBHHHH
T ss_pred HhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEEC--CC-C---eEEEEEeHHHHHHHHHhcCC-------CccccCHHHH
Confidence 4667899999999999999999999999999994 23 4 8999999999984 443321 0112334444
Q ss_pred cCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 365 PVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 365 ~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
|.+++.++.+++++.+|+++|.+++.+++||+|+ |+++|+||++||++.+
T Consensus 80 ------------m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 80 ------------ARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp ------------HTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred ------------hcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 7788999999999999999999999999999997 9999999999998754
No 102
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.45 E-value=5.3e-13 Score=119.25 Aligned_cols=116 Identities=14% Similarity=0.230 Sum_probs=98.9
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcc
Q 010368 289 RPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGT 368 (512)
Q Consensus 289 ~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~ 368 (512)
++++++.+++++.+|+++|.+++++.+||. + +| +++|++|..|+++++...... ....+++++
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~--~--~~---~~~Givt~~dl~~~~~~~~~~------~~~~~v~~~---- 83 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVV--D--GD---DIAGIVTERDYARKVVLQERS------SKATRVEEI---- 83 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEE--S--SS---SEEEEEEHHHHHHHSGGGTCC------SSSCBHHHH----
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEe--e--CC---EEEEEEEHHHHHHHHHhccCC------ccccCHHHH----
Confidence 678999999999999999999999999996 2 34 799999999999887653211 123344444
Q ss_pred cccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 369 WVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 369 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
|.+++.++.+++++.+|+++|.+++++++||+| +|+++|+||.+||++.....
T Consensus 84 --------m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 84 --------MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp --------SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred --------cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 888899999999999999999999999999999 79999999999999977654
No 103
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.45 E-value=7.4e-13 Score=139.78 Aligned_cols=166 Identities=14% Similarity=0.204 Sum_probs=125.5
Q ss_pred EEeeeHHHHHHHHHHhhcCCCCCChhhHhhhhHHHHHHhhhhhccccCCCCCcCCCCceEeCCCCCHHHHHHHHHhC---
Q 010368 234 VGVLSASDFILILRELGNHGSNLTEEELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHN--- 310 (512)
Q Consensus 234 vGilt~~Dii~il~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~i~v~~~~sl~da~~~m~~~--- 310 (512)
+.-++..|+.+++..+.........+-+..+...+...+...+.|+...+|.+|.++++++.+++++.+|++.|.++
T Consensus 108 l~~l~~dd~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~ 187 (473)
T 2zy9_A 108 LEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPD 187 (473)
T ss_dssp HHHSCHHHHHHHHHHHHHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGG
T ss_pred HHhCCHHHHHHHHHhCCHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCC
Confidence 33456667777776654321001111222233344455556677888889999999999999999999999999986
Q ss_pred --CCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccCcccccccCCCCCCCceeecCCC
Q 010368 311 --EVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPSA 388 (512)
Q Consensus 311 --~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ig~~~~~v~~~m~~~~~~v~~~~ 388 (512)
+++++||+| ++ + +++|+++.+|++.. . ...++++ +|.++++++++++
T Consensus 188 ~~~~~~ipVvd--~~-~---~lvGiVt~~Dll~~------~-------~~~~v~d------------im~~~~~~v~~~~ 236 (473)
T 2zy9_A 188 AETIYYIYVVD--EK-G---RLKGVLSLRDLIVA------D-------PRTRVAE------------IMNPKVVYVRTDT 236 (473)
T ss_dssp CSEEEEEEEEC--TT-S---BEEEEEEHHHHHHS------C-------TTSBGGG------------TSBSSCCCEESSS
T ss_pred cCceeEEEEEC--CC-C---cEEEEEEHHHHhcC------C-------CCCcHHH------------HhCCCCeEEeCCC
Confidence 589999994 33 4 89999999999752 0 1233444 4888999999999
Q ss_pred CHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 389 SLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 389 ~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
++.+|++.|.+++...+||+|++|+++|+||.+|++....+.
T Consensus 237 ~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 237 DQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp BHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 999999999999999999999999999999999999876543
No 104
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.44 E-value=2.1e-13 Score=124.50 Aligned_cols=138 Identities=19% Similarity=0.270 Sum_probs=98.4
Q ss_pred cCCC--CceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhccc--CCCCcccccCcc
Q 010368 286 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRH--CSSSLPILKLPI 361 (512)
Q Consensus 286 ~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~--~~~~~~~l~~~v 361 (512)
+|.+ +++++.+++++.+|+++|.+++++.+||++ .+ | +++|++|.+||+++....... .....+......
T Consensus 9 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd--~~-~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 9 FMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVID--DN-W---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp HSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TT-C---BEEEEEEHHHHTCC-------------------CC
T ss_pred hcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEEC--CC-C---eEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4555 799999999999999999999999999994 33 4 899999999998543211000 000000000000
Q ss_pred ------ccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 362 ------CAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 362 ------~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
..+........++++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||++||++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 00000111224556688889999999999999999999999999999999999999999999986644
No 105
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.43 E-value=5.9e-13 Score=122.08 Aligned_cols=135 Identities=10% Similarity=0.111 Sum_probs=99.4
Q ss_pred ceEe--CCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCc----ccccCccccc
Q 010368 291 LVYA--GPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSL----PILKLPICAI 364 (512)
Q Consensus 291 ~i~v--~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~----~~l~~~v~~l 364 (512)
++++ .+++++.+|+++|.+++++.+||++. +++| +++|++|..|+++++........... ..+.....+.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~-d~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVS-RESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEE-CCCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 7888 99999999999999999999999931 2344 89999999999988765321100000 0000000000
Q ss_pred c-CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 365 P-VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 365 ~-ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
. .......++++|.+++.++.+++++.+|+++|.+++++++||+| +|+++|+||++||++.+...
T Consensus 101 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHh
Confidence 0 00112246667888899999999999999999999999999998 89999999999999876543
No 106
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.42 E-value=2.7e-13 Score=121.54 Aligned_cols=123 Identities=9% Similarity=0.148 Sum_probs=97.5
Q ss_pred cCCC--CceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccc
Q 010368 286 AFPR--PLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICA 363 (512)
Q Consensus 286 ~~~~--~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~ 363 (512)
+|.+ +++++.+++++.+|++.|.+++++.+||+| . +| +++|++|..||++++...... ........++
T Consensus 19 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd--~-~~---~lvGivt~~dl~~~~~~~~~~--~~~~~~~~~v-- 88 (159)
T 1yav_A 19 FMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLD--P-SY---RLHGLIGTNMIMNSIFGLERI--EFEKLDQITV-- 88 (159)
T ss_dssp HSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEEC--T-TC---BEEEEEEHHHHHHHHBCSSSB--CGGGTTTSBH--
T ss_pred HhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEEC--C-CC---CEEEEeEHHHHHHHhhhhccc--chhhhccCCH--
Confidence 3555 789999999999999999999999999994 3 34 899999999999876532100 0000112233
Q ss_pred ccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 364 IPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 364 l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
+++|.+++.++.+++++.+|+++|.++++ +||+|++|+++|+||++||++.....
T Consensus 89 ----------~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 89 ----------EEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp ----------HHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred ----------HHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 34488889999999999999999998876 99999899999999999999876543
No 107
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.42 E-value=3.6e-13 Score=142.16 Aligned_cols=116 Identities=17% Similarity=0.283 Sum_probs=102.5
Q ss_pred ccCCCCCCCceeecCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHH
Q 010368 372 KIGEPNRRPLAMLRPSASLSAALNLLVQA-----QVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 446 (512)
Q Consensus 372 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l 446 (512)
+++++|.++++++.++.++.+|++.|.++ +++++||+|++++++|+++.+|++... .+.++.++|
T Consensus 156 ~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~----------~~~~v~dim 225 (473)
T 2zy9_A 156 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----------PRTRVAEIM 225 (473)
T ss_dssp BSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSC----------TTSBGGGTS
T ss_pred CHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCC----------CCCcHHHHh
Confidence 45666999999999999999999999886 579999999999999999999997621 135777766
Q ss_pred hcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 447 QLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.++++++++++++.+|++.|.+++.+.+||||+ +|+++|+||..|+++.+.
T Consensus 226 -------------~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe-~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 226 -------------NPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp -------------BSSCCCEESSSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred -------------CCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC-CCEEEEEEehHhhHHHHH
Confidence 678999999999999999999999999999996 899999999999998764
No 108
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.37 E-value=2.4e-12 Score=136.81 Aligned_cols=113 Identities=18% Similarity=0.309 Sum_probs=101.0
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC--CCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCC
Q 010368 375 EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD--NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 452 (512)
Q Consensus 375 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~ 452 (512)
+.|..+++++.+++++.+++++|.+++++++||+|+ +++++|+|+.+|+... . ..+.++.++|
T Consensus 117 ~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~---~------~~~~~V~~vM------ 181 (511)
T 3usb_A 117 SGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI---Q------DYSIKISDVM------ 181 (511)
T ss_dssp SCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---C------CSSSBHHHHC------
T ss_pred cccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---c------cCCCcHHHhc------
Confidence 347778899999999999999999999999999998 8999999999999641 1 1246889887
Q ss_pred CCCccccCC-cceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHh
Q 010368 453 YSPYELRSQ-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 510 (512)
Q Consensus 453 ~~~~~~~~~-~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~l 510 (512)
.+ +++++++++++.+++++|.+++++.+||||+ +|+++|+||+.||++.+
T Consensus 182 -------~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-~g~l~GiIT~~Dil~~~ 232 (511)
T 3usb_A 182 -------TKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN-NGVLQGLITIKDIEKVI 232 (511)
T ss_dssp -------CCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHH
T ss_pred -------ccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC-CCCEeeeccHHHHHHhh
Confidence 44 7899999999999999999999999999996 99999999999999876
No 109
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.36 E-value=1.5e-13 Score=150.26 Aligned_cols=137 Identities=14% Similarity=0.054 Sum_probs=101.9
Q ss_pred ccCCCCC--CCceeecCCCCHHHHHHHHH-hcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccC----------cc
Q 010368 372 KIGEPNR--RPLAMLRPSASLSAALNLLV-QAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHIN----------LS 438 (512)
Q Consensus 372 ~v~~~m~--~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~----------~~ 438 (512)
+++++|. +++.++++++++.++.+.|. +++++++||+|++++++|+|+++|+.+........... ..
T Consensus 454 ~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~ 533 (632)
T 3org_A 454 TAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLD 533 (632)
T ss_dssp BHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC------------------
T ss_pred cHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccC
Confidence 5677798 89999999999999999999 79999999999999999999999998755432100000 00
Q ss_pred c----ccHHHHHhcC----------------CCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEE
Q 010368 439 E----MTIHQALQLG----------------QDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVE 498 (512)
Q Consensus 439 ~----~~v~~~l~~~----------------~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~li 498 (512)
. ..+....... ...+...++|++++++|++++++.+|++.|.+++++++||+| +|+++
T Consensus 534 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve--~G~lv 611 (632)
T 3org_A 534 AADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE--RGKLV 611 (632)
T ss_dssp -------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE--TTEEE
T ss_pred HHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE--CCEEE
Confidence 0 0011110000 000013457899999999999999999999999999999995 79999
Q ss_pred EEEehHHHHHHh
Q 010368 499 GIVSLSDIFKFL 510 (512)
Q Consensus 499 GiIS~~DIl~~l 510 (512)
|+||++||++.+
T Consensus 612 GIVT~~Dll~~~ 623 (632)
T 3org_A 612 GIVEREDVAYGY 623 (632)
T ss_dssp EEEEGGGTEECC
T ss_pred EEEehhhHHHHH
Confidence 999999998765
No 110
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.29 E-value=7.7e-12 Score=132.92 Aligned_cols=114 Identities=21% Similarity=0.331 Sum_probs=100.3
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEEC--CCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCC
Q 010368 375 EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVD--DNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDS 452 (512)
Q Consensus 375 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~ 452 (512)
++|..+++++.+++++.+++++|.+++++.+||+| ++++++|+|+.+|++... . .+.++.++|
T Consensus 94 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~--~-------~~~~v~~im------ 158 (491)
T 1zfj_A 94 NGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS--D-------YNAPISEHM------ 158 (491)
T ss_dssp TTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--C-------SSSBTTTSC------
T ss_pred hcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--c-------CCCcHHHHc------
Confidence 44888899999999999999999999999999999 789999999999998531 0 134566654
Q ss_pred CCCccccCC-cceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 453 YSPYELRSQ-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 453 ~~~~~~~~~-~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+ +++++.+++++.++++.|.+++++++||||+ +|+++|+||..||++.+.
T Consensus 159 -------~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~-~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 159 -------TSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN-SGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp -------CCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred -------CCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEEHHHHHHHHh
Confidence 55 7889999999999999999999999999996 999999999999999864
No 111
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.27 E-value=1.6e-12 Score=137.58 Aligned_cols=113 Identities=16% Similarity=0.289 Sum_probs=86.7
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCC
Q 010368 375 EPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYS 454 (512)
Q Consensus 375 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~ 454 (512)
++|..+++++.+++++.+++++|.+++++++||+|++++++|+||.+|+... . ..+.++.++|
T Consensus 93 ~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---~------~~~~~v~diM-------- 155 (496)
T 4fxs_A 93 AGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---T------DLTKSVAAVM-------- 155 (496)
T ss_dssp C--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---C------CTTSBGGGTS--------
T ss_pred cccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---c------cCCCcHHHHh--------
Confidence 4477889999999999999999999999999999999999999999999621 1 1235777766
Q ss_pred CccccC-C-cceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHh
Q 010368 455 PYELRS-Q-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 510 (512)
Q Consensus 455 ~~~~~~-~-~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~l 510 (512)
. + +++++.+++++.+|++.|.+++++.+||||+ +|+++|+||+.||++..
T Consensus 156 -----~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 156 -----TPKERLATVKEGATGAEVQEKMHKARVEKILVVND-EFQLKGMITAKDFHKAE 207 (496)
T ss_dssp -----EEGGGCCEEECC----CGGGTCC---CCCEEEECT-TSBCCEEECCC-----C
T ss_pred -----cCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCCEEEeehHhHHHHhh
Confidence 4 2 5899999999999999999999999999996 99999999999999863
No 112
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.26 E-value=1.2e-11 Score=132.40 Aligned_cols=123 Identities=14% Similarity=0.156 Sum_probs=102.0
Q ss_pred CCCCcCCCCceEeCCC-CCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCc
Q 010368 282 SHGKAFPRPLVYAGPN-DNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLP 360 (512)
Q Consensus 282 ~~g~~~~~~~i~v~~~-~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~ 360 (512)
.++.+|.++++++.++ +|+.+|+++|.+++++++||+| .+++ +++|+||.+||++.+..... ....+
T Consensus 385 ~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd--~~~g---~lvGiVt~~Dll~~l~~~~~-------~~~~~ 452 (527)
T 3pc3_A 385 AIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD--QDDG---SVLGVVGQETLITQIVSMNR-------QQSDP 452 (527)
T ss_dssp BGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC--TTTC---CEEEEEEHHHHHHHHHHHCC-------CTTSB
T ss_pred cHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE--CCCC---EEEEEEEHHHHHHHHHhccC-------cCCCc
Confidence 3567899999999999 9999999999999999999994 2334 89999999999988875311 12334
Q ss_pred cccccCcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC----CcEEEEEeHHHHHHHHhcc
Q 010368 361 ICAIPVGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN----DSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 361 v~~l~ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~----g~liGivs~~Di~~~~~~~ 430 (512)
+.++ |.++++++.+++++.+++++|.+++ .+||+|++ |+++|+||+.||++.+.+.
T Consensus 453 V~~i------------m~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 453 AIKA------------LNKRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp GGGG------------EETTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred HHHH------------hcCCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 4444 8889999999999999999997665 47999974 8999999999999977654
No 113
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.25 E-value=7e-13 Score=141.02 Aligned_cols=115 Identities=17% Similarity=0.349 Sum_probs=4.7
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCC
Q 010368 374 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 453 (512)
Q Consensus 374 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 453 (512)
+++|.++++++.+++++.+|+++|.+++++.+||+|++++++|+||.+|+..... .+.++.++|
T Consensus 98 ~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~---------~~~~v~~im------- 161 (494)
T 1vrd_A 98 ENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKN---------LSKKIKDLM------- 161 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcC---------CCCcHHHHh-------
Confidence 3448888999999999999999999999999999998899999999999986311 135777776
Q ss_pred CCccccCC--cceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 454 SPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 454 ~~~~~~~~--~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.+ ++.++.+++++.+++++|.+++++++||||+ +|+++|+||..||++.+.
T Consensus 162 ------~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 162 ------TPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-DNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp ------------------------------------------------------CHHHHT
T ss_pred ------CCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHhhhc
Confidence 44 7899999999999999999999999999996 899999999999999864
No 114
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.24 E-value=8.6e-11 Score=124.79 Aligned_cols=158 Identities=14% Similarity=0.184 Sum_probs=117.0
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
.|..+++++.+++|+.+|+++|.+++++++||++.. .++ +++|++|.+|++. . .....++.++
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~------~------~~~~~~V~~v- 180 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRF------I------QDYSIKISDV- 180 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTT------C------CCSSSBHHHH-
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhh------h------ccCCCcHHHh-
Confidence 467889999999999999999999999999999521 134 8999999999953 0 1123445555
Q ss_pred CcccccccCCCCCC-CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHH
Q 010368 366 VGTWVPKIGEPNRR-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQ 444 (512)
Q Consensus 366 ig~~~~~v~~~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~ 444 (512)
|.+ ++++++++.++.+++++|.+++++.+||+|++|+++|+||.+|+++...... .+.+
T Consensus 181 -----------M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~---------a~~D 240 (511)
T 3usb_A 181 -----------MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPN---------SAKD 240 (511)
T ss_dssp -----------CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTT---------CCBC
T ss_pred -----------cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhccc---------chhh
Confidence 876 8999999999999999999999999999999999999999999998765421 1111
Q ss_pred HHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEe
Q 010368 445 ALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVE 491 (512)
Q Consensus 445 ~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd 491 (512)
.... ..-...+.......+.++.+.+.++..++|-.
T Consensus 241 ~~~r-----------l~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 241 KQGR-----------LLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp TTSC-----------BCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred hccc-----------eeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 1100 01122333344445566777888888776654
No 115
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.24 E-value=6.9e-13 Score=140.99 Aligned_cols=113 Identities=12% Similarity=0.156 Sum_probs=0.0
Q ss_pred CCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC---CcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCC
Q 010368 377 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN---DSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 453 (512)
Q Consensus 377 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 453 (512)
|.++++++.+++++.+|+++|.+++++++||+|++ ++++|+|+.+|++.. . . ....++.++|
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~-~------~~~~~V~diM------- 167 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L-T------QTETKVSDMM------- 167 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h-c------cccCcHHHHh-------
Confidence 66788999999999999999999999999999987 899999999999864 1 1 1235777777
Q ss_pred CCccccCCc--ceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 454 SPYELRSQR--CQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 454 ~~~~~~~~~--~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
.++ ++++.+++++.+|+++|.+++++++||||+ +|+++|+||.+||++.+.
T Consensus 168 ------~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 168 ------TPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD-DQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------
T ss_pred ------CCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC-CCeEEEEEEecHHHHhhh
Confidence 444 899999999999999999999999999996 899999999999998764
No 116
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.23 E-value=9.3e-13 Score=139.29 Aligned_cols=113 Identities=17% Similarity=0.287 Sum_probs=0.8
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCC
Q 010368 374 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 453 (512)
Q Consensus 374 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 453 (512)
+++|..+++++.+++++.+|+++|.+++++.+||+| +++++|+||.+|+..... .+.++.++|
T Consensus 91 ~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~---------~~~~V~~vM------- 153 (490)
T 4avf_A 91 ETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPN---------AGDTVAAIM------- 153 (490)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccc---------cCCcHHHHh-------
Confidence 344777889999999999999999999999999999 899999999999964211 235778877
Q ss_pred CCccccC-C-cceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHh
Q 010368 454 SPYELRS-Q-RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 510 (512)
Q Consensus 454 ~~~~~~~-~-~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~l 510 (512)
. + +++++.+++++.+|+++|.+++++.+||||+ +|+++|+||+.||++.+
T Consensus 154 ------tp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 154 ------TPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-NFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp -----------------------------------------------------------
T ss_pred ------ccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEehHHhhhhc
Confidence 4 2 6899999999999999999999999999996 99999999999999864
No 117
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.14 E-value=4.3e-12 Score=131.59 Aligned_cols=109 Identities=22% Similarity=0.288 Sum_probs=0.0
Q ss_pred CCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC---CCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCC
Q 010368 377 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD---NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSY 453 (512)
Q Consensus 377 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~ 453 (512)
|..+++++.++.++.+|+++|.+++++.+||+++ +++|+||||.+|+... + .+.+|.++|
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d--------~~~~V~evM------- 206 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D--------AETPIKSVM------- 206 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c--------cceEhhhhc-------
Confidence 4457899999999999999999999999999986 6799999999998542 1 125778877
Q ss_pred CCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHH
Q 010368 454 SPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKF 509 (512)
Q Consensus 454 ~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ 509 (512)
+++++++..+.++.+|.++|.++++..|||||+ +++++|+||+.|+++.
T Consensus 207 ------T~~lvt~~~~~~leeA~~iL~~~kieklpVVd~-~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 207 ------TTEVVTGSSPITLEKANSLLRETKKGKLPIVDS-NGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------
T ss_pred ------ccceEEecCCCCHHHHHHHHHHccccceeEEcc-CCcEEEEEEechhhhh
Confidence 667999999999999999999999999999996 9999999999999875
No 118
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.12 E-value=4.8e-12 Score=134.50 Aligned_cols=154 Identities=16% Similarity=0.151 Sum_probs=18.5
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCC--CCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccc
Q 010368 287 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQ--DGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAI 364 (512)
Q Consensus 287 ~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~--~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l 364 (512)
|.++++++.+++|+.+|+++|.+++++++||++ .+ .+ +++|+||.+|++.. . .....+
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd--~~~~~g---~lvGiVt~~Dl~~~--~---------~~~~~~---- 162 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTD--DGTPHG---VLLGLVTQRDYPID--L---------TQTETK---- 162 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEE--CCCcCC---eEEEEEEHHHHHhh--h---------ccccCc----
Confidence 677999999999999999999999999999995 23 24 89999999999753 0 011223
Q ss_pred cCcccccccCCCCCCC--ceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccH
Q 010368 365 PVGTWVPKIGEPNRRP--LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTI 442 (512)
Q Consensus 365 ~ig~~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v 442 (512)
++++|.++ ++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+||++....... .
T Consensus 163 --------V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~---------~ 225 (503)
T 1me8_A 163 --------VSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE---------L 225 (503)
T ss_dssp -------------------------------------------------------------------CCC---------C
T ss_pred --------HHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc---------h
Confidence 34448876 9999999999999999999999999999999999999999999986543211 0
Q ss_pred HHHHhcCCCCCCCccccCCcceEEcCCCCHHHHHHHHhcCCCcEEEE
Q 010368 443 HQALQLGQDSYSPYELRSQRCQMCLPSDTLHKVMERLANPGVRRLVI 489 (512)
Q Consensus 443 ~~~l~~~~~~~~~~~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~V 489 (512)
.+.. ..++ ....+.. ....+.++.|.+.+++.+.|
T Consensus 226 ~d~~---------~~l~--v~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 226 VDSQ---------KRYL--VGAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp BCTT---------SCBC--CEEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred hccc---------cccc--cccccCc-hhHHHHHHHHHhhhccceEE
Confidence 1100 0000 1123444 66666788888889886544
No 119
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.10 E-value=1.8e-10 Score=126.33 Aligned_cols=80 Identities=24% Similarity=0.415 Sum_probs=65.8
Q ss_pred ceeeEEEEecCCCcEEEEEEccCCCCCC-CCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEeeCCCCCe----eeCCC
Q 010368 24 VLIPMRFVWPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPF----ISSEY 98 (512)
Q Consensus 24 ~~~~~~f~w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~~d~~~~~----~~d~~ 98 (512)
....|.|.|+.+|+.++|+|+||+|.+. .+|++ .++.|.+++.||||.|+|||+|||+|..||.+|. ..+++
T Consensus 15 ~~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~---~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~~~~~~~~~ 91 (645)
T 4aef_A 15 RVAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ---EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPERRVYTRKGY 91 (645)
T ss_dssp EEEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE---CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCCEEEEEEGGG
T ss_pred eEEEEEEecCCCCeEEEEEEcCCCCCCCcccceE---cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCCcccccccCc
Confidence 3577899999999999999999999985 35543 4689999999999999999999999999999873 34555
Q ss_pred CCeeeEEE
Q 010368 99 GIVNTVLL 106 (512)
Q Consensus 99 G~~nn~~~ 106 (512)
+..+.+..
T Consensus 92 ~~~~~~~~ 99 (645)
T 4aef_A 92 KFHREVNV 99 (645)
T ss_dssp TEEEEEEE
T ss_pred Ccccceee
Confidence 65555444
No 120
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.09 E-value=4.5e-11 Score=130.58 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=99.0
Q ss_pred CCCcCC--CCceEeCCCCCHHHHHHHHH-hCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCC------
Q 010368 283 HGKAFP--RPLVYAGPNDNLKDVARKIL-HNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSS------ 353 (512)
Q Consensus 283 ~g~~~~--~~~i~v~~~~sl~da~~~m~-~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~------ 353 (512)
++.+|. ++++++++++++.|+++.|. +++++++||+| + ++ +++|+++.+|+++.+.+........
T Consensus 455 V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd--~-~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 455 AREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVID--A-NG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp HHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBC--T-TC---BBCCEESHHHHTTTTTTC-------------
T ss_pred HHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEe--c-CC---eEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 345677 89999999999999999999 89999999995 3 34 8999999999998765432110000
Q ss_pred -----cccccCcccccc-----------------CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCC
Q 010368 354 -----LPILKLPICAIP-----------------VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDN 411 (512)
Q Consensus 354 -----~~~l~~~v~~l~-----------------ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 411 (512)
...+.+.+..+. +-.....+.++|.++++++++++++.+|+++|.+++++++||+ ++
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-EC
Confidence 000000011100 0011123788899999999999999999999999999999999 78
Q ss_pred CcEEEEEeHHHHHHH
Q 010368 412 DSLLDIYCRSDITAL 426 (512)
Q Consensus 412 g~liGivs~~Di~~~ 426 (512)
|+++|+||++|+++.
T Consensus 608 G~lvGIVT~~Dll~~ 622 (632)
T 3org_A 608 GKLVGIVEREDVAYG 622 (632)
T ss_dssp TEEEEEEEGGGTEEC
T ss_pred CEEEEEEehhhHHHH
Confidence 999999999999764
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.07 E-value=1.4e-09 Score=115.57 Aligned_cols=116 Identities=16% Similarity=0.231 Sum_probs=98.2
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
.|..+++++.+++++.+|+++|.+++++++||++. .+++ +++|++|.+|++... ....
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~~------------~~~~------ 152 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFIS------------DYNA------ 152 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHCS------------CSSS------
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhhc------------cCCC------
Confidence 57789999999999999999999999999999941 0234 899999999997420 0122
Q ss_pred CcccccccCCCCCC-CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 366 VGTWVPKIGEPNRR-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 366 ig~~~~~v~~~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
.+.++|.+ +++++.+++++.+++++|.+++++.+||+|++|+++|++|+.||++....
T Consensus 153 ------~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 153 ------PISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp ------BTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ------cHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 34455887 88999999999999999999999999999999999999999999987763
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.05 E-value=2.3e-12 Score=137.63 Aligned_cols=116 Identities=21% Similarity=0.247 Sum_probs=67.3
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECC---CCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCC
Q 010368 374 GEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDD---NDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQ 450 (512)
Q Consensus 374 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~ 450 (512)
.++|.++++++.+++++.+|+++|.+++++.+||+|+ +++++|+||.+|+...... ....++.++|
T Consensus 111 ~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~-------~~~~~v~~vm---- 179 (514)
T 1jcn_A 111 EQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK-------DHTTLLSEVM---- 179 (514)
T ss_dssp CTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC--------------------------
T ss_pred hhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc-------cCCCCHHHHh----
Confidence 4457778899999999999999999999999999997 5899999999998764210 1235677776
Q ss_pred CCCCCccccCC--cceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHh
Q 010368 451 DSYSPYELRSQ--RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 510 (512)
Q Consensus 451 ~~~~~~~~~~~--~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~l 510 (512)
.+ +++++.+++++.+|+++|.+++++++||||+ +|+++|+||++||++++
T Consensus 180 ---------~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 180 ---------TPRIELVVAPAGVTLKEANEILQRSKKGKLPIVND-CDELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-SSCCC----CCCCSSCC
T ss_pred ---------CCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECC-CCeEEEEEEHHHHHHHh
Confidence 55 7899999999999999999999999999996 89999999999998754
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.02 E-value=3.3e-11 Score=125.01 Aligned_cols=113 Identities=24% Similarity=0.313 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccccccC
Q 010368 287 FPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPV 366 (512)
Q Consensus 287 ~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~i 366 (512)
+..+++++.|+.|+.||+++|.+++++.+||++....++ +++||+|.+|+. +- + ...+++
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f~-----d-------~~~~V~---- 203 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-FQ-----D-------AETPIK---- 203 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-cc-----c-------cceEhh----
Confidence 567899999999999999999999999999996433345 899999999973 21 1 123344
Q ss_pred cccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 367 GTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 367 g~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
++|..+++++....++.+|.++|.++++..+||||++++|+|+||++|+.+..
T Consensus 204 --------evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 204 --------SVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred --------hhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 44999999999999999999999999999999999999999999999998754
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.01 E-value=3.7e-11 Score=127.33 Aligned_cols=108 Identities=17% Similarity=0.353 Sum_probs=0.0
Q ss_pred CCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHHhcCCCCCCCc
Q 010368 377 NRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPY 456 (512)
Q Consensus 377 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l~~~~~~~~~~ 456 (512)
|..+++++.+++++.+++++|.+++++++||+|+ ++++|+|+.+|++. . ...++.++|
T Consensus 99 m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~--------~~~~v~~im---------- 156 (486)
T 2cu0_A 99 IVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA---R--------EGKLVKELM---------- 156 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C--------CCCCHHHHc----------
Confidence 6678889999999999999999999999999997 99999999999975 1 124677766
Q ss_pred cccCCcceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHh
Q 010368 457 ELRSQRCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFL 510 (512)
Q Consensus 457 ~~~~~~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~l 510 (512)
.++++++.+++++.++++.|.+++++.+||||+ +|+++|+||..||++.+
T Consensus 157 ---~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde-~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 157 ---TKEVITVPESIEVEEALKIMIENRIDRLPVVDE-RGKLVGLITMSDLVARK 206 (486)
T ss_dssp ------------------------------------------------------
T ss_pred ---cCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec-CCeEEEEEEHHHHHHhh
Confidence 557889999999999999999999999999996 89999999999999865
No 125
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.97 E-value=2.1e-10 Score=121.38 Aligned_cols=112 Identities=18% Similarity=0.214 Sum_probs=82.8
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
.|..+++++.+++++.+|+++|.+++++++||++ .+ + +++|+||.+|++. . .....++.++
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd--~~-~---~lvGiVt~rDL~~------~------~~~~~~v~di- 154 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVT--EN-N---ELVGIITGRDVRF------V------TDLTKSVAAV- 154 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEEC--SS-S---BEEEEEEHHHHTT------C------CCTTSBGGGT-
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEc--cC-C---EEEEEEEHHHHhh------c------ccCCCcHHHH-
Confidence 5778999999999999999999999999999995 33 4 8999999999951 0 1112334444
Q ss_pred CcccccccCCCCC-C-CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 366 VGTWVPKIGEPNR-R-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 366 ig~~~~~v~~~m~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
|. + ++++++++.++.+++++|.++++..+||+|++|+++|+||++|+++..
T Consensus 155 -----------M~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 155 -----------MTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp -----------SEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred -----------hcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 77 3 589999999999999999999999999999999999999999998754
No 126
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.94 E-value=2.1e-10 Score=121.88 Aligned_cols=114 Identities=17% Similarity=0.305 Sum_probs=5.0
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
.|.++++++.+++++.+|+++|.+++++.+||+| .+ + +++|+||.+|+++. . ....+
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~-~---~lvGivt~~Dl~~~--~----------~~~~~----- 156 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVD--EE-G---RLVGLLTNRDVRFE--K----------NLSKK----- 156 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEc--CC-C---EEEEEEEHHHHHhh--c----------CCCCc-----
Confidence 4778999999999999999999999999999995 23 4 89999999999741 0 01223
Q ss_pred CcccccccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhc
Q 010368 366 VGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKD 429 (512)
Q Consensus 366 ig~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~ 429 (512)
+.++|.+ +++++.+++++.+++++|.+++++.+||+|++|+++|+||+.|+++....
T Consensus 157 -------v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 157 -------IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -----------------------------------------------------------CHHHHTC
T ss_pred -------HHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 3444887 89999999999999999999999999999999999999999999987653
No 127
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.91 E-value=1.4e-10 Score=122.53 Aligned_cols=112 Identities=16% Similarity=0.181 Sum_probs=0.0
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
.|..+++++.+++|+.+|+++|.+++++++||++ ++ +++|++|.+|+... . ....++
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~-~-----------~~~~~V---- 149 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVK-P-----------NAGDTV---- 149 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhc-c-----------ccCCcH----
Confidence 5778899999999999999999999999999994 34 89999999998521 0 112333
Q ss_pred CcccccccCCCCC-C-CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 010368 366 VGTWVPKIGEPNR-R-PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 428 (512)
Q Consensus 366 ig~~~~~v~~~m~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~ 428 (512)
.++|. + +++++.+++++.+|+++|.+++++.+||+|++|+++|+||++|+++...
T Consensus 150 --------~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 150 --------AAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------------
T ss_pred --------HHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 44487 4 6899999999999999999999999999999999999999999998653
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.76 E-value=1.7e-09 Score=114.59 Aligned_cols=110 Identities=15% Similarity=0.308 Sum_probs=0.4
Q ss_pred cCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCcccccc
Q 010368 286 AFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIP 365 (512)
Q Consensus 286 ~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~~l~ 365 (512)
.|..+++++.+++++.+++++|.+++++++||++ . + +++|+++.+|++. . ...++
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd--~--~---~lvGivt~~Dl~~---~-----------~~~~v---- 152 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVE--D--E---KVVGIITKKDIAA---R-----------EGKLV---- 152 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEE--C--C---EEEEEEEHHHhcc---C-----------CCCCH----
Confidence 4678999999999999999999999999999995 2 3 7999999999974 1 02233
Q ss_pred CcccccccCCCCCCCceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHh
Q 010368 366 VGTWVPKIGEPNRRPLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAK 428 (512)
Q Consensus 366 ig~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~ 428 (512)
.++|.++++++.+++++.+++++|.+++++.+||+|++|+++|++|.+||++...
T Consensus 153 --------~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 153 --------KELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp --------------------------------------------------------------C
T ss_pred --------HHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 3448878899999999999999999999999999999999999999999998653
No 129
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.68 E-value=5.4e-10 Score=119.25 Aligned_cols=116 Identities=21% Similarity=0.282 Sum_probs=66.6
Q ss_pred CcCCCCceEeCCCCCHHHHHHHHHhCCCceeeEEecCCC--CCCcCeEEEeeehhhHHHHHHhhcccCCCCcccccCccc
Q 010368 285 KAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQ--DGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPIC 362 (512)
Q Consensus 285 ~~~~~~~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~--~g~~~~lvGiis~~dIl~~l~~~~~~~~~~~~~l~~~v~ 362 (512)
..|.++++++.+++++.+|+++|.+++++.+||+| .+ ++ +++|+||.+|+..... .....
T Consensus 112 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~~--- 173 (514)
T 1jcn_A 112 QGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITE--TGTMGS---KLVGIVTSRDIDFLAE----------KDHTT--- 173 (514)
T ss_dssp TTSCSSCCCCCC-----------------CEESCC-------------CCEECTTTTC----------------------
T ss_pred hccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEe--CCCcCC---EEEEEEEHHHHHhhhh----------ccCCC---
Confidence 35778899999999999999999999999999995 32 34 8999999999864210 00122
Q ss_pred cccCcccccccCCCCCC--CceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHH
Q 010368 363 AIPVGTWVPKIGEPNRR--PLAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALA 427 (512)
Q Consensus 363 ~l~ig~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~ 427 (512)
.+.++|.+ +++++.+++++.+|+++|.++++..+||+|++|+++|+||++|+++..
T Consensus 174 ---------~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 174 ---------LLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred ---------CHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 33444887 899999999999999999999999999999999999999999987643
No 130
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.65 E-value=4.9e-08 Score=74.66 Aligned_cols=48 Identities=19% Similarity=0.364 Sum_probs=42.8
Q ss_pred ceEeCCCCCHHHHHHHHHhCCCceeeEEecCCCCCCcCeEEEeeehhhHHHHHHh
Q 010368 291 LVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCR 345 (512)
Q Consensus 291 ~i~v~~~~sl~da~~~m~~~~i~~lpVvd~d~~~g~~~~lvGiis~~dIl~~l~~ 345 (512)
++++.|++|+.+|+++|.+++++++||++ +| +++|++|.+||++.+..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d----~~---~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME----GD---EILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE----TT---EEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE----CC---EEEEEEEHHHHHHHHHh
Confidence 68999999999999999999999999994 24 89999999999876543
No 131
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.64 E-value=7.2e-08 Score=73.68 Aligned_cols=47 Identities=23% Similarity=0.408 Sum_probs=43.8
Q ss_pred ceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 463 CQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 463 ~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
+++|.+++++.+|+++|.+++++++||+| +|+++||||.+||++.++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d--~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME--GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 68999999999999999999999999999 689999999999997653
No 132
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.45 E-value=2.1e-07 Score=70.51 Aligned_cols=62 Identities=16% Similarity=0.333 Sum_probs=50.7
Q ss_pred ceeecCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHhcccccccCcccccHHHHH
Q 010368 381 LAMLRPSASLSAALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQAL 446 (512)
Q Consensus 381 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~liGivs~~Di~~~~~~~~~~~l~~~~~~v~~~l 446 (512)
++++.+++++.+|+++|.+++++++||+|+ |+++|+||.+|+++....... ...+.++.++|
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~---~~~~~~v~~im 63 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGK---NPKEVKVEEIM 63 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTC---CGGGCBGGGTC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCC---CcccCCHHHhc
Confidence 568999999999999999999999999997 999999999999986543321 12245777766
No 133
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.40 E-value=7.3e-07 Score=67.48 Aligned_cols=48 Identities=23% Similarity=0.418 Sum_probs=44.2
Q ss_pred cceEEcCCCCHHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHHHhh
Q 010368 462 RCQMCLPSDTLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFLL 511 (512)
Q Consensus 462 ~~~tv~~~~tL~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~~ll 511 (512)
++.++.+++++.+|++.|.+++++++||+| +|+++|+||.+||++++.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d--~~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME--GDEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 367899999999999999999999999999 399999999999999863
No 134
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.37 E-value=7.9e-07 Score=76.61 Aligned_cols=58 Identities=17% Similarity=0.338 Sum_probs=46.8
Q ss_pred ceeeEEEEecC---CCcEEEEEEc---cCCCCCC--CCCCccC--CCCCeEEEEEEeCCce-EEEEEEE
Q 010368 24 VLIPMRFVWPY---GGRSVFLSGS---FNRWSEL--LPMSPVE--GCPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 24 ~~~~~~f~w~~---~~~~V~l~Gs---f~~W~~~--~~m~~~~--~~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
..+.++|.-.. .|+.|+|+|| +.+|++. ++|.+.+ .....|++++.||+|. ++|||++
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 44778887554 4799999999 9999974 5887642 1468999999999986 9999998
No 135
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.81 E-value=1.2e-05 Score=66.83 Aligned_cols=58 Identities=21% Similarity=0.464 Sum_probs=45.1
Q ss_pred ceeeEEEEecC---CCcEEEEEEcc---CCCCCC--CCCCccCC--CCCeEEEEEEeCCce-EEEEEEE
Q 010368 24 VLIPMRFVWPY---GGRSVFLSGSF---NRWSEL--LPMSPVEG--CPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 24 ~~~~~~f~w~~---~~~~V~l~Gsf---~~W~~~--~~m~~~~~--~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
..+.++|.-.+ .|++|+|+||. .+|++. ++|.+..- .++.|++++.||+|. ++|||++
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v 73 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIR 73 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEE
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEE
Confidence 34777777554 37999999985 589964 58876421 357899999999986 9999999
No 136
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=97.63 E-value=0.00017 Score=74.14 Aligned_cols=89 Identities=15% Similarity=0.197 Sum_probs=66.1
Q ss_pred ceeeEEEEecCCC--------cEEEEE--EccC---CCCCCCCCCccCCCCCeEEEEEEeCCceE-EEEEEEC-------
Q 010368 24 VLIPMRFVWPYGG--------RSVFLS--GSFN---RWSELLPMSPVEGCPTVFQIIWSIPPGYH-QYKFCVD------- 82 (512)
Q Consensus 24 ~~~~~~f~w~~~~--------~~V~l~--Gsf~---~W~~~~~m~~~~~~~~~f~~~~~L~~g~~-~ykf~VD------- 82 (512)
....|+|.|.... ++|+|. |..+ +|.+ .+|.|.+ ..|+|+.++.||+|-| .|.|+||
T Consensus 29 ~~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~~-~~m~r~~-~~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~ 106 (403)
T 3c8d_A 29 EMFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQP-QSMQRIA-GTDVWQWTTQLNANWRGSYCFIPTERDDIFS 106 (403)
T ss_dssp SEEEEEEEEECTTCSTTTCCCCEEEEEETTTC-------C-CBCEECT-TSSEEEEEEEEETTCEEEEEEEEESCCSTTC
T ss_pred CcEEEEEEeeCCCcccccCccceEEEECcCCCccccccCc-cccccCC-CCCeEEEEEEECCCcEEEEEEEecCcccccc
Confidence 3567999998764 689998 3222 1222 3687753 4699999999999999 9999999
Q ss_pred -----------------CEEeeCCCCCeeeCC-CCCeeeEEEeeCCCCCC
Q 010368 83 -----------------GEWRHDEHQPFISSE-YGIVNTVLLATEPNFMH 114 (512)
Q Consensus 83 -----------------g~w~~d~~~~~~~d~-~G~~nn~~~v~~~~~~~ 114 (512)
|..+.||.+|..... .|...|++++.+...++
T Consensus 107 ~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~p~~~~~~ 156 (403)
T 3c8d_A 107 APSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEMPQAPLQP 156 (403)
T ss_dssp CC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEECTTCCCCT
T ss_pred cccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccCCCCCcCc
Confidence 778899999966543 48888999998754443
No 137
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.28 E-value=0.00063 Score=73.88 Aligned_cols=66 Identities=24% Similarity=0.434 Sum_probs=51.5
Q ss_pred eEEEE-ecCCCcEEEEEEccCCCCCC-CCCCccCCCCCeEEEEEE-eCCceEEEEEEE---CCEE--eeCCCCCee
Q 010368 27 PMRFV-WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV---DGEW--RHDEHQPFI 94 (512)
Q Consensus 27 ~~~f~-w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~V---Dg~w--~~d~~~~~~ 94 (512)
-++|. |...+++|.|+|+||+|... .+|.+. ...|.|++.++ +.+|. .|+|.| ||++ +.||.....
T Consensus 26 gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-~~~GvW~~~v~~~~~g~-~Y~f~i~~~~g~~~~~~DPya~~~ 99 (617)
T 1m7x_A 26 GTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-KESGIWELFIPGAHNGQ-LYKYEMIDANGNLRLKSDPYAFEA 99 (617)
T ss_dssp EEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-TTTTEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSE
T ss_pred cEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-CCCCEEEEEEcCCCCCC-EEEEEEEcCCCcEEEecCccceee
Confidence 47776 99999999999999999754 688763 34699999998 77887 499999 6764 566655543
No 138
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.25 E-value=0.00051 Score=75.46 Aligned_cols=65 Identities=34% Similarity=0.612 Sum_probs=50.7
Q ss_pred eEEEE-ecCCCcEEEEEEccCCCCCC-CCCCccCCCCCeEEEEEE-eCCceEEEEEEE---CCEE--eeCCCCCe
Q 010368 27 PMRFV-WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV---DGEW--RHDEHQPF 93 (512)
Q Consensus 27 ~~~f~-w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~V---Dg~w--~~d~~~~~ 93 (512)
-++|. |...+++|.|+|+||+|+.. .||.+. ...|+|++.++ +.+|. .|||.| ||+| +.||....
T Consensus 137 g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~~ 209 (722)
T 3k1d_A 137 GVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAFG 209 (722)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSS
T ss_pred eEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeeccccee
Confidence 46787 99999999999999999864 588764 23589999998 88885 588888 5654 56665543
No 139
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.16 E-value=0.0005 Score=76.12 Aligned_cols=62 Identities=26% Similarity=0.432 Sum_probs=48.6
Q ss_pred EEEE-ecCCCcEEEEEEccCCCCCC-CCCCccCCCCCeEEEEEE-------eCCceEEEEEEEC---CEE--eeCCCCC
Q 010368 28 MRFV-WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-------IPPGYHQYKFCVD---GEW--RHDEHQP 92 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~f~~~~~-------L~~g~~~ykf~VD---g~w--~~d~~~~ 92 (512)
++|. |...|++|+|+|+||+|... .+|.+. ..|+|++.++ +++|.+ |||.|+ |+| +.||-..
T Consensus 67 v~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~--~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~~~~dpya~ 142 (755)
T 3aml_A 67 TIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD--KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWVDRIPAWIR 142 (755)
T ss_dssp EEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC--TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEecCCCCCceeeceeC--CCCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEEecCCcchh
Confidence 6776 99999999999999999764 688763 4699999998 677874 888886 455 3466443
No 140
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.06 E-value=0.011 Score=47.99 Aligned_cols=62 Identities=16% Similarity=0.284 Sum_probs=45.7
Q ss_pred eEEEEecCCCcEEEEEEccC--CCCCC--CCCCccCCCCCeEEEEEEeCCc-eEEEEEEECC--EEeeCCC
Q 010368 27 PMRFVWPYGGRSVFLSGSFN--RWSEL--LPMSPVEGCPTVFQIIWSIPPG-YHQYKFCVDG--EWRHDEH 90 (512)
Q Consensus 27 ~~~f~w~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~f~~~~~L~~g-~~~ykf~VDg--~w~~d~~ 90 (512)
.+++.|..+.++|+|...+. +|+.. ++|.+. .+++.+..+++||.| .++|+|- || .|-.+..
T Consensus 6 ~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~-~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g 74 (104)
T 2laa_A 6 KVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA-EISGYAKITVDIGSASQLEAAFN-DGNNNWDSNNT 74 (104)
T ss_dssp EEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE-TTTTEEEEEEECTTCSCEEEEEE-CSSSCEESTTT
T ss_pred EEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc-cCCCeEEEEEECCCCCEEEEEEe-CCCCcCcCCCC
Confidence 46677778889999999995 89875 367653 234533699999975 5999995 77 4876543
No 141
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=95.47 E-value=0.0085 Score=64.14 Aligned_cols=61 Identities=21% Similarity=0.231 Sum_probs=49.8
Q ss_pred eEEEE-ecCCCcEEEEEEccCCCCCCCCCCccCCCCCeEEEEEE-eCCceEEEEEEECCE-EeeCCCCCe
Q 010368 27 PMRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGE-WRHDEHQPF 93 (512)
Q Consensus 27 ~~~f~-w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~VDg~-w~~d~~~~~ 93 (512)
-++|. |...+++|.|+|.|+ ..++|.+. .+|+|++.++ +.+|. .|||.|||. ...||....
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~--~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD--EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC--TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC--CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 35776 999999999999998 45789874 3699999998 88885 699999996 778876643
No 142
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=95.45 E-value=0.032 Score=61.17 Aligned_cols=58 Identities=22% Similarity=0.450 Sum_probs=46.0
Q ss_pred CCceeeEEEEecC-----CCcEEEEEEccC---CCCC--------CC-CCCccCCCCCeEEEEEEeCCce-EEEEEEE
Q 010368 22 DTVLIPMRFVWPY-----GGRSVFLSGSFN---RWSE--------LL-PMSPVEGCPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 22 ~~~~~~~~f~w~~-----~~~~V~l~Gsf~---~W~~--------~~-~m~~~~~~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
....++++|.-.+ -|++|+|+||-. +|++ .+ +|... ....|++++.||+|. ++|||++
T Consensus 578 ~~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~--~~~~W~~~v~l~~~~~~eyKy~~ 653 (686)
T 1qho_A 578 SGTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAP--NYPDWFYVFSVPAGKTIQFKFFI 653 (686)
T ss_dssp SSSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCT--TTTSEEEEEEEETTCEEEEEEEE
T ss_pred CCCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccC--CCCcEEEEEEeCCCCeEEEEEEE
Confidence 3456888888544 478999999886 7998 34 77653 357899999999986 9999998
No 143
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.31 E-value=0.007 Score=67.08 Aligned_cols=55 Identities=15% Similarity=0.189 Sum_probs=44.7
Q ss_pred EEEE-ecCCCcEEEEEEccCCCCC-----CCCCCccCCCCCeEEEEEE-eC------CceEEEEEEECCEE
Q 010368 28 MRFV-WPYGGRSVFLSGSFNRWSE-----LLPMSPVEGCPTVFQIIWS-IP------PGYHQYKFCVDGEW 85 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~f~~~~~-L~------~g~~~ykf~VDg~w 85 (512)
++|. |...+++|.|++ |++|.. .++|.+. .+|+|++.++ +. +|.|.|+|.|+|.|
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA--GSGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC--STTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccC--CCCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 6776 999999999999 988653 3577653 4699999998 66 89999999999864
No 144
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=95.07 E-value=0.022 Score=62.09 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=43.5
Q ss_pred EEEE-ecCCCcEEEEEEccCCCC--CCCCCCccCCCCCeEEEEEE-eCCceEEEEEEECCE
Q 010368 28 MRFV-WPYGGRSVFLSGSFNRWS--ELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGE 84 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~Gsf~~W~--~~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~VDg~ 84 (512)
++|. |...+++|.|++ |+++. ..++|.+. .+|+|++.++ +.+|.+ |+|.|+|.
T Consensus 21 ~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~--~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 21 VNFTLFSAHAERVELCV-FDANGQEHRYDLPGH--SGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEECSSCSEEEEEE-ECTTCCEEEEECCEE--ETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred EEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCC--CCCEEEEEECCCCCCCE-EEEEEeee
Confidence 7776 999999999999 98765 24688763 4699999987 778886 99999984
No 145
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=95.06 E-value=0.021 Score=61.35 Aligned_cols=61 Identities=8% Similarity=-0.042 Sum_probs=47.9
Q ss_pred CCceeeEEEE-ecCCCcEEEE-EEccCCCCC----CCCCCccCC--CCCeEEEEEEeCCceEEEEEEEC
Q 010368 22 DTVLIPMRFV-WPYGGRSVFL-SGSFNRWSE----LLPMSPVEG--CPTVFQIIWSIPPGYHQYKFCVD 82 (512)
Q Consensus 22 ~~~~~~~~f~-w~~~~~~V~l-~Gsf~~W~~----~~~m~~~~~--~~~~f~~~~~L~~g~~~ykf~VD 82 (512)
....+.++|. |...+++|.| .|+|++|+. ..+|.+... ..++|++.++.....+.|||.|.
T Consensus 19 ~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 19 SETQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp ETTEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 3456777775 8888999999 899999975 358887432 23579999998887899999984
No 146
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=94.85 E-value=0.023 Score=61.25 Aligned_cols=61 Identities=23% Similarity=0.387 Sum_probs=48.7
Q ss_pred eEEEE-ecCCCcEEEEEEccCCCCCCCCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEeeCCCCCee
Q 010368 27 PMRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDEHQPFI 94 (512)
Q Consensus 27 ~~~f~-w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~~d~~~~~~ 94 (512)
-++|. |...+++|.|+|+ + ..++|.+. ..|+|++.+++.+|.+ |+|.|||..+.||.....
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~--~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~ 96 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSL--GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFL 96 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEE--ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCC
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeC--CCcEEEEEEECCCCcE-EEEEECCeEecCCCcccc
Confidence 46776 9999999999994 2 34788874 3689999999888986 999999977778766543
No 147
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=94.85 E-value=0.023 Score=62.70 Aligned_cols=55 Identities=15% Similarity=0.331 Sum_probs=43.9
Q ss_pred eEEEE-ecCCCcEEEEEEccCCCCC-----CCCCCccCCCCCeEEEEEE-eCCceEEEEEEECCEE
Q 010368 27 PMRFV-WPYGGRSVFLSGSFNRWSE-----LLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDGEW 85 (512)
Q Consensus 27 ~~~f~-w~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~VDg~w 85 (512)
-+.|. |...+++|.|++ |+.+.. .++|.+. ..|+|++.++ +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~--~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNK--TGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEE--SSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccC--CCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 37786 999999999999 876542 3578763 4699999997 788987 999999864
No 148
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=94.61 E-value=0.21 Score=53.68 Aligned_cols=59 Identities=17% Similarity=0.260 Sum_probs=45.6
Q ss_pred CceeeEEEEecC---CCcEEEEEEccC---CCCCC--CCCCccCC--CCCeEEEEEEeCCce-EEEEEEE
Q 010368 23 TVLIPMRFVWPY---GGRSVFLSGSFN---RWSEL--LPMSPVEG--CPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 23 ~~~~~~~f~w~~---~~~~V~l~Gsf~---~W~~~--~~m~~~~~--~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
...+.++|.-.+ .|++|+|+|+-. +|++. ++|...+- ++..|++.+.||+|. ++|||+|
T Consensus 494 ~~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 494 PTSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp CSEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 345778888554 479999999876 89874 47876431 137899999999986 9999998
No 149
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=94.30 E-value=0.022 Score=61.27 Aligned_cols=61 Identities=18% Similarity=0.194 Sum_probs=48.2
Q ss_pred CCceeeEEEE-ecCCCcEEEE-EEccCCCCC------CCCCCccCCC--CCeEEEEEEeCCceEEEEEEEC
Q 010368 22 DTVLIPMRFV-WPYGGRSVFL-SGSFNRWSE------LLPMSPVEGC--PTVFQIIWSIPPGYHQYKFCVD 82 (512)
Q Consensus 22 ~~~~~~~~f~-w~~~~~~V~l-~Gsf~~W~~------~~~m~~~~~~--~~~f~~~~~L~~g~~~ykf~VD 82 (512)
....+.++|. |...+++|.| .|+|++|+. ..+|.+.... .+.|++.++.....+.|||.|+
T Consensus 19 ~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 19 DSETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 4566888886 8888999999 799999965 4689874322 4579999998877889999984
No 150
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=94.17 E-value=0.075 Score=58.23 Aligned_cols=59 Identities=29% Similarity=0.395 Sum_probs=46.4
Q ss_pred CceeeEEEEecC----CCcEEEEEEccC---CCCCC--C-CCCccC-CCCCeEEEEEEeCCce-EEEEEEE
Q 010368 23 TVLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPVE-GCPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 23 ~~~~~~~f~w~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~~-~~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
...++|+|.-.. .|+.|+|+||-. +|++. + +|.... .....|++++.||+|. +||||++
T Consensus 581 ~~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 651 (683)
T 3bmv_A 581 GNQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIK 651 (683)
T ss_dssp SSEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 357899998655 479999999887 89964 5 666410 2357999999999985 9999997
No 151
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=93.87 E-value=0.094 Score=57.38 Aligned_cols=59 Identities=24% Similarity=0.419 Sum_probs=46.2
Q ss_pred CceeeEEEEecC----CCcEEEEEEccC---CCCCC--C-CCCccC-CCCCeEEEEEEeCCce-EEEEEEE
Q 010368 23 TVLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPVE-GCPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 23 ~~~~~~~f~w~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~~-~~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
...++++|.-.. .|+.|+|+||-. +|++. + +|.... .....|++++.||+|. +||||++
T Consensus 577 ~~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~ 647 (680)
T 1cyg_A 577 NDQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIK 647 (680)
T ss_dssp SCEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 457899998654 479999999877 89974 4 665410 2457999999999885 9999998
No 152
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=93.79 E-value=0.1 Score=57.12 Aligned_cols=59 Identities=27% Similarity=0.410 Sum_probs=46.0
Q ss_pred CceeeEEEEecC----CCcEEEEEEccC---CCCCC--C-CCCcc-CCCCCeEEEEEEeCCce-EEEEEEE
Q 010368 23 TVLIPMRFVWPY----GGRSVFLSGSFN---RWSEL--L-PMSPV-EGCPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 23 ~~~~~~~f~w~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~-~~~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
...++++|.-.. .|+.|+|+||-. +|++. + +|... ......|++++.||.|. +||||++
T Consensus 584 ~~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 584 GDQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SSEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 457889998654 479999999877 89974 4 56541 02457999999999985 9999997
No 153
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=93.48 E-value=0.073 Score=58.65 Aligned_cols=64 Identities=25% Similarity=0.411 Sum_probs=47.4
Q ss_pred eEEEE-ecCCCcEEEEEEccCCCCCC-CCCCccCCCCCeEEEEEE-eCCceEEEEEEEC--CEE--eeCCCCCe
Q 010368 27 PMRFV-WPYGGRSVFLSGSFNRWSEL-LPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVD--GEW--RHDEHQPF 93 (512)
Q Consensus 27 ~~~f~-w~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~VD--g~w--~~d~~~~~ 93 (512)
-++|. |...+++|.|++.|++|... ++|.+.+ .|+|++.++ +.+|. .|+|.|+ |.| ..||....
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~~--~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DPya~~ 184 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRLE--KGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQYAKA 184 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEECG--GGEEEEEEESCCTTC-EEEEEEEETTEEEEECCTTCSS
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccCC--CCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCCcccc
Confidence 36776 99999999999999988653 6888743 589999998 45564 5777765 764 56776543
No 154
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=93.38 E-value=0.069 Score=61.20 Aligned_cols=64 Identities=16% Similarity=0.126 Sum_probs=48.1
Q ss_pred EEEE-ecCCCcEEEEEE-ccCCCCC-CCCCCccCCCCCeEEEEEE-eCCceEEEEEEEC------CE----EeeCCCCCe
Q 010368 28 MRFV-WPYGGRSVFLSG-SFNRWSE-LLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVD------GE----WRHDEHQPF 93 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~G-sf~~W~~-~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~VD------g~----w~~d~~~~~ 93 (512)
+.|. |...+++|.|++ +|++|.. .++|.+. ...|+|++.++ +.+|.+ |+|.|+ |. ...||....
T Consensus 306 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~~~DPYa~~ 383 (1083)
T 2fhf_A 306 VTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYEVTDPYAHS 383 (1083)
T ss_dssp EEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEcCCCCccceEECeEC-CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccceecCCccce
Confidence 6676 999999999999 9999965 3688753 24589999987 677875 888875 43 467776543
No 155
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=93.12 E-value=0.16 Score=53.50 Aligned_cols=58 Identities=12% Similarity=0.173 Sum_probs=44.8
Q ss_pred CceeeEEEEecC----CCcEEEEEEccC---CCCCCC---CCCccCCCCCeEEEEEEeCCce-EEEEEEE
Q 010368 23 TVLIPMRFVWPY----GGRSVFLSGSFN---RWSELL---PMSPVEGCPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 23 ~~~~~~~f~w~~----~~~~V~l~Gsf~---~W~~~~---~m~~~~~~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
...+.++|.-.+ -|++|+|+||-. +|++.. +|... ..++.|++.+.||.|. ++|||++
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-~~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-SHSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-TTTTEEEEEEEEETTCCEEEEEEE
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-CCCCEEEEEEEECCCCcEEEEEEE
Confidence 456888888543 489999999876 798863 45441 2345999999999986 9999998
No 156
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=92.31 E-value=0.09 Score=59.22 Aligned_cols=55 Identities=13% Similarity=0.051 Sum_probs=39.5
Q ss_pred EEEE-ecCCCcEEEEEEccCCCCCCCCCCccCCCCCeEEEEEE-eCCceEEEEEEECC
Q 010368 28 MRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVDG 83 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~VDg 83 (512)
++|. |...+++|.|++-+++|.+...+..+...+|+|++.++ +.+|. .|+|.|++
T Consensus 138 ~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~~~~g~W~~~~~~~~~g~-~Y~y~v~~ 194 (884)
T 4aio_A 138 VSLHLWAPTAQGVSVCFFDGPAGPALETVQLKESNGVWSVTGPREWENR-YYLYEVDV 194 (884)
T ss_dssp EEEEEECTTCSEEEEEEESTTTSCEEEEEECEEETTEEEEEEEGGGTTC-EEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCeeeeeeecCCCCEEEEEECCCCCCC-EEEEEEeC
Confidence 6787 99999999999966666554321112235799999998 56675 58888875
No 157
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=91.31 E-value=0.088 Score=59.04 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=48.0
Q ss_pred EEEE-ecCCCcEEEEEE-ccCCCCC---CCCCCccCCCCCeEEEEEEeCCce-----EEEEEEEC--CE--EeeCCCCC
Q 010368 28 MRFV-WPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIPPGY-----HQYKFCVD--GE--WRHDEHQP 92 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~f~~~~~L~~g~-----~~ykf~VD--g~--w~~d~~~~ 92 (512)
+.|. |...|++|.|++ ++++|.. .++|.+ ..+|+|++.+.+.+|. +.|+|.|+ |. ...||...
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~--~~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~ 222 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVK--NNKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAK 222 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEE--CTTSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeecccc--CCCCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCccce
Confidence 6777 999999999998 7888853 468876 3579999999776662 67888886 33 56777664
No 158
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=91.27 E-value=0.042 Score=59.05 Aligned_cols=61 Identities=15% Similarity=0.243 Sum_probs=46.5
Q ss_pred CCceeeEEEE-ecCCCcEEEE-EEccCCCCC---CCCCCccCCC--CCeEEEEEEeCCceEEEEEEEC
Q 010368 22 DTVLIPMRFV-WPYGGRSVFL-SGSFNRWSE---LLPMSPVEGC--PTVFQIIWSIPPGYHQYKFCVD 82 (512)
Q Consensus 22 ~~~~~~~~f~-w~~~~~~V~l-~Gsf~~W~~---~~~m~~~~~~--~~~f~~~~~L~~g~~~ykf~VD 82 (512)
....+.++|. |...+++|.| .|+|++|.. ..+|.+.... .+.|++.++.....+.|||.|.
T Consensus 19 ~~~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 19 NGTTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp SSSCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCCE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEEE
Confidence 3455667765 8888999999 799999975 3588874322 4579999998877788898873
No 159
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=91.26 E-value=0.21 Score=53.93 Aligned_cols=61 Identities=23% Similarity=0.356 Sum_probs=46.7
Q ss_pred EEEE-ecCCCcEEEEEEccCCCCCCCCCCccCCCCCeEEEEEE-eCCceEEEEEEEC-CEEeeCCCCCeee
Q 010368 28 MRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCVD-GEWRHDEHQPFIS 95 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~VD-g~w~~d~~~~~~~ 95 (512)
++|. |...+++|.|++ +|.. .||.+. ..|.|.+.++ +.+|. .|||.|+ |....||......
T Consensus 44 ~~F~vwap~a~~v~l~~---~~~~-~~m~~~--~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~ 107 (618)
T 3m07_A 44 VRFRLWATGQQKVMLRL---AGKD-QEMQAN--GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQK 107 (618)
T ss_dssp EEEEEECTTCSCEEEEE---TTEE-EECEEC--STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBS
T ss_pred EEEEEECCCCCEEEEEE---CCCc-ccCeec--CCEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeee
Confidence 6777 999999999998 3543 688874 3589999885 77786 6899995 5688888765443
No 160
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=90.46 E-value=0.28 Score=53.93 Aligned_cols=64 Identities=11% Similarity=0.126 Sum_probs=46.8
Q ss_pred EEEE-ecCCCcEEEEEE-ccCCCCC---CCCCCccCCCCCeEEEEEEeC--Cc-----eEEEEEEEC--CE--EeeCCCC
Q 010368 28 MRFV-WPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIP--PG-----YHQYKFCVD--GE--WRHDEHQ 91 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~f~~~~~L~--~g-----~~~ykf~VD--g~--w~~d~~~ 91 (512)
+.|. |...+++|.|++ +|++|.. .++|.+. ..|+|++.++-. +| -+.|+|.|+ |. -..||..
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya 103 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG--ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 103 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC--GGGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC--CCCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCce
Confidence 6776 999999999999 8998864 4688763 468999988731 34 267888886 54 3567755
Q ss_pred Ce
Q 010368 92 PF 93 (512)
Q Consensus 92 ~~ 93 (512)
..
T Consensus 104 ~~ 105 (714)
T 2ya0_A 104 KS 105 (714)
T ss_dssp SE
T ss_pred ee
Confidence 43
No 161
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=90.37 E-value=0.21 Score=56.57 Aligned_cols=61 Identities=20% Similarity=0.206 Sum_probs=44.9
Q ss_pred EEEE-ecCCCcEEEEEEccCCCC----CCCCCCccCCCCCeEEEEEE-eCCceEEEEEEE--CCE--EeeCCCCC
Q 010368 28 MRFV-WPYGGRSVFLSGSFNRWS----ELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV--DGE--WRHDEHQP 92 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~Gsf~~W~----~~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~V--Dg~--w~~d~~~~ 92 (512)
++|. |...+++|.|++ |++|. ..++|.+. ..|+|++.++ +.+|. .|+|.| +|. ++.||...
T Consensus 327 v~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya~ 397 (921)
T 2wan_A 327 TSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS--DNGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYAR 397 (921)
T ss_dssp EEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC--GGGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC--CCCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCcce
Confidence 6676 999999999997 99994 23688764 3589999998 45665 377776 564 45676554
No 162
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=89.92 E-value=0.24 Score=45.97 Aligned_cols=51 Identities=20% Similarity=0.210 Sum_probs=41.2
Q ss_pred CcEEEEEEccCCCCCC--CCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEee
Q 010368 36 GRSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRH 87 (512)
Q Consensus 36 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~~ 87 (512)
.+++|++|++++|... .+|.+.....+.|...+.|+.|. +|||.-+..|-.
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~~~ 64 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENEYI 64 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTCCB
T ss_pred cceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCccc
Confidence 5789999999998653 47877666679999999998875 899998765543
No 163
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.51 E-value=0.49 Score=53.51 Aligned_cols=62 Identities=26% Similarity=0.480 Sum_probs=46.7
Q ss_pred CceeeEEEEecCCCcEEEEEEcc-------CCCCCCC---CCCccCCCCCeEEEEEEeCCceEEEEEEECCEEe
Q 010368 23 TVLIPMRFVWPYGGRSVFLSGSF-------NRWSELL---PMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWR 86 (512)
Q Consensus 23 ~~~~~~~f~w~~~~~~V~l~Gsf-------~~W~~~~---~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~ 86 (512)
..++|+..--...+..+.+.|+| .+|++.- -|.+. .+|.|+.+-.||+|.|+||+.++|.|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~--~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 150 GEKIPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKI--NPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CCEECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEE--ETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccccccccccccchhhhccccccCCCCCCcceeecc--CCcceeeeeccCCcceeEEEeecCccc
Confidence 34667766666667788899977 4688763 23222 368999999999999999999998773
No 164
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=88.11 E-value=0.37 Score=52.16 Aligned_cols=56 Identities=11% Similarity=0.167 Sum_probs=41.3
Q ss_pred eEEEE-e----cCCCcEEEEEEccCCCCC-CCCCCc--cC--CCCCeEEEEEEeCCceEEEEEEECC
Q 010368 27 PMRFV-W----PYGGRSVFLSGSFNRWSE-LLPMSP--VE--GCPTVFQIIWSIPPGYHQYKFCVDG 83 (512)
Q Consensus 27 ~~~f~-w----~~~~~~V~l~Gsf~~W~~-~~~m~~--~~--~~~~~f~~~~~L~~g~~~ykf~VDg 83 (512)
.++|. | ...+++|.|++.|++ .. .++|.+ .. +..+.|++.++.......|+|.|+|
T Consensus 31 ~v~f~v~~~~~ap~a~~V~l~~~~~~-~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 31 SVTLKLRTFKGDITSANIKYWDTADN-AFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CEEEEEEEETTCCSEEEEEEEETTTT-EEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred EEEEEEEEecCcCCeeEEEEEEecCC-CEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 46665 7 567899999999974 32 368876 32 2347999999876666789999965
No 165
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=87.72 E-value=0.1 Score=55.22 Aligned_cols=57 Identities=21% Similarity=0.404 Sum_probs=0.0
Q ss_pred ceeeEEEEe-cC---CCcEEEEEEccC---CCCCC--CCCCccCCCCCeEEEEEEeCCce-EEEEEEE
Q 010368 24 VLIPMRFVW-PY---GGRSVFLSGSFN---RWSEL--LPMSPVEGCPTVFQIIWSIPPGY-HQYKFCV 81 (512)
Q Consensus 24 ~~~~~~f~w-~~---~~~~V~l~Gsf~---~W~~~--~~m~~~~~~~~~f~~~~~L~~g~-~~ykf~V 81 (512)
..++++|.- .+ .|++|+|+||-. +|++. ++|... .....|++++.||+|. ++|||+|
T Consensus 429 ~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-~~~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 429 ALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-SGYPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp --------------------------------------------------------------------
T ss_pred CEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-CCCCeEEEEEEeCCCCcEEEEEEE
Confidence 457888884 22 479999999887 79874 577631 2357899999999985 9999997
No 166
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=86.84 E-value=0.46 Score=54.28 Aligned_cols=63 Identities=13% Similarity=0.195 Sum_probs=45.8
Q ss_pred EEEE-ecCCCcEEEEEE-ccCCCCC---CCCCCccCCCCCeEEEEEEeC--Cc-----eEEEEEEEC--CE--EeeCCCC
Q 010368 28 MRFV-WPYGGRSVFLSG-SFNRWSE---LLPMSPVEGCPTVFQIIWSIP--PG-----YHQYKFCVD--GE--WRHDEHQ 91 (512)
Q Consensus 28 ~~f~-w~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~f~~~~~L~--~g-----~~~ykf~VD--g~--w~~d~~~ 91 (512)
+.|. |...+++|.|++ +|++|.. .++|.+ ...|+|++.++-. +| -+.|+|.|+ |. ...||..
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~--~~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa 410 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEK--GERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 410 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEE--CGGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEeccc--CCCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccc
Confidence 6777 999999999999 8999964 468876 3468999988742 23 266888885 43 4567654
Q ss_pred C
Q 010368 92 P 92 (512)
Q Consensus 92 ~ 92 (512)
.
T Consensus 411 ~ 411 (1014)
T 2ya1_A 411 K 411 (1014)
T ss_dssp S
T ss_pred e
Confidence 3
No 167
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=85.84 E-value=1.3 Score=35.54 Aligned_cols=59 Identities=15% Similarity=0.400 Sum_probs=41.5
Q ss_pred EEEEecCCCcEEEEEEccCC--CCCC--CCCCccCCCCCeEEEEEEeCC-ceEEEEEEECC--EEeeC
Q 010368 28 MRFVWPYGGRSVFLSGSFNR--WSEL--LPMSPVEGCPTVFQIIWSIPP-GYHQYKFCVDG--EWRHD 88 (512)
Q Consensus 28 ~~f~w~~~~~~V~l~Gsf~~--W~~~--~~m~~~~~~~~~f~~~~~L~~-g~~~ykf~VDg--~w~~d 88 (512)
+++.|..+..+|+|-=.+.+ |+.. ++|.+. .+.|.|..+|.|+. ..++|+| -|| .|-.+
T Consensus 12 vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN 77 (102)
T 2c3v_A 12 ITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNN 77 (102)
T ss_dssp EEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECG
T ss_pred EEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-ccCCceEEEEecCCCceEEEEE-eCCCcccccC
Confidence 34444477888988877864 9874 466542 35788999999996 4689998 565 58654
No 168
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.64 E-value=7.3 Score=33.76 Aligned_cols=66 Identities=17% Similarity=0.232 Sum_probs=44.1
Q ss_pred CcEEEEEEccCCCCCCC--CCCccCC-----CCCeEEEEEEeCC-----ce--EEEEEEECCEEeeCCCCCeeeCCCCCe
Q 010368 36 GRSVFLSGSFNRWSELL--PMSPVEG-----CPTVFQIIWSIPP-----GY--HQYKFCVDGEWRHDEHQPFISSEYGIV 101 (512)
Q Consensus 36 ~~~V~l~Gsf~~W~~~~--~m~~~~~-----~~~~f~~~~~L~~-----g~--~~ykf~VDg~w~~d~~~~~~~d~~G~~ 101 (512)
.++|+|.=+||+|+... ++..... ....|...+.||+ ++ +-.+|.|+|+- -.|.+++.
T Consensus 60 eK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~e--------yWDNN~G~ 131 (156)
T 2eef_A 60 EKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQT--------YWDSNRGK 131 (156)
T ss_dssp CCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEE--------EEESGGGS
T ss_pred CcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCE--------EecCCCCe
Confidence 48999999999998753 4433221 2358999999987 33 67788899851 23444555
Q ss_pred eeEEEeeC
Q 010368 102 NTVLLATE 109 (512)
Q Consensus 102 nn~~~v~~ 109 (512)
|=.+...+
T Consensus 132 NY~v~~~~ 139 (156)
T 2eef_A 132 NYRIIRAE 139 (156)
T ss_dssp CCCEEETT
T ss_pred eEEEEEEE
Confidence 65566553
No 169
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=61.54 E-value=7.4 Score=40.09 Aligned_cols=46 Identities=13% Similarity=0.234 Sum_probs=35.8
Q ss_pred cEEEEEEccCCCCCC--CCCCccCCCCCeEEEEEEeCCceEEEEEEECC
Q 010368 37 RSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDG 83 (512)
Q Consensus 37 ~~V~l~Gsf~~W~~~--~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg 83 (512)
+..||+|++++|... .+|.+.....+.|.....|..+. +|||..-.
T Consensus 151 ~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~~ 198 (470)
T 4fe9_A 151 DGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPAS 198 (470)
T ss_dssp TCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEGG
T ss_pred ceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeecc
Confidence 568999999999864 35655555678999999998766 79999643
No 170
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=60.97 E-value=6.6 Score=38.92 Aligned_cols=51 Identities=20% Similarity=0.221 Sum_probs=39.8
Q ss_pred CcEEEEEEccCCCCCC--CCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEee
Q 010368 36 GRSVFLSGSFNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRH 87 (512)
Q Consensus 36 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~~ 87 (512)
.+..||+|++.+|... .+|.+.....|.|...+.|+.| ..|||.-...|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 4789999999977543 4777766668999999999877 5799988766543
No 171
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=57.09 E-value=28 Score=27.96 Aligned_cols=48 Identities=15% Similarity=0.074 Sum_probs=33.6
Q ss_pred cEEEEEEc--cCCCCC-CC--CCCcc----CCCCCeEEEEEEeCCc-eEEEEEEECCE
Q 010368 37 RSVFLSGS--FNRWSE-LL--PMSPV----EGCPTVFQIIWSIPPG-YHQYKFCVDGE 84 (512)
Q Consensus 37 ~~V~l~Gs--f~~W~~-~~--~m~~~----~~~~~~f~~~~~L~~g-~~~ykf~VDg~ 84 (512)
++|.|.=+ ||+|+. .. +.... ...-..|...+.||+- .+--+|.|+|+
T Consensus 34 K~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~ 91 (106)
T 2djm_A 34 KKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGK 91 (106)
T ss_dssp EEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSC
T ss_pred cEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCc
Confidence 77888888 999998 32 22111 1223589999999865 36778999985
No 172
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=50.99 E-value=29 Score=27.92 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=42.4
Q ss_pred CceeeEEEEecCCC---cEEEEEE-ccCCCCCCCCCCccCCCCCeEEEEEE-eCCceEEEEEEE-CCEEeeC
Q 010368 23 TVLIPMRFVWPYGG---RSVFLSG-SFNRWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV-DGEWRHD 88 (512)
Q Consensus 23 ~~~~~~~f~w~~~~---~~V~l~G-sf~~W~~~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~V-Dg~w~~d 88 (512)
+.-.-+.+.+.+|+ ..|.|.| +=++|. ||.+. +..|+..-. -+.|-+.||+.. ||+|...
T Consensus 25 p~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~rn---Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 25 PKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKK---GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp SSEEEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEEE---TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred ccEEEEEEEEeCCCCCEEEEEEEeCCCCcEe---Ecccc---CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 44556666676664 7799996 667884 67764 578997651 244789999988 6888765
No 173
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=49.08 E-value=19 Score=29.76 Aligned_cols=24 Identities=21% Similarity=0.519 Sum_probs=19.3
Q ss_pred EEEeCCce-EEEEEEECCEEeeCCCC
Q 010368 67 IWSIPPGY-HQYKFCVDGEWRHDEHQ 91 (512)
Q Consensus 67 ~~~L~~g~-~~ykf~VDg~w~~d~~~ 91 (512)
.+.|..|. |.|+| ++|+|+.+.+.
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEEecCCCEEEEEE-cCCEEEEcccc
Confidence 45688885 99999 99999988654
No 174
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=45.99 E-value=8.2 Score=26.80 Aligned_cols=13 Identities=46% Similarity=0.864 Sum_probs=11.0
Q ss_pred ECCEEeeCCCCCe
Q 010368 81 VDGEWRHDEHQPF 93 (512)
Q Consensus 81 VDg~w~~d~~~~~ 93 (512)
|||+|.+|+...+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 6999999998764
No 175
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=44.45 E-value=18 Score=37.21 Aligned_cols=53 Identities=25% Similarity=0.500 Sum_probs=38.6
Q ss_pred CcEEEEEEccCCCCCC-------CCCCccCCCCCeEEEEEEeCCceEEEEEEECCEEeeCC
Q 010368 36 GRSVFLSGSFNRWSEL-------LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEWRHDE 89 (512)
Q Consensus 36 ~~~V~l~Gsf~~W~~~-------~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w~~d~ 89 (512)
...++++|++++|... .+|.+.....+.|...+.+..| .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 4679999999987532 1343444557899999998765 589999998886654
No 176
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=42.71 E-value=41 Score=25.34 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=24.7
Q ss_pred CCEEEEECCCCcEEEEEeHHHHHHHHhcc
Q 010368 402 VSSIPIVDDNDSLLDIYCRSDITALAKDK 430 (512)
Q Consensus 402 ~~~lpVvd~~g~liGivs~~Di~~~~~~~ 430 (512)
...+=++|++|..+|+++..+.+.++.+.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~ 41 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARR 41 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHc
Confidence 45577899999999999999999887664
No 177
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=39.88 E-value=12 Score=26.19 Aligned_cols=13 Identities=38% Similarity=0.728 Sum_probs=10.8
Q ss_pred ECCEEeeCCCCCe
Q 010368 81 VDGEWRHDEHQPF 93 (512)
Q Consensus 81 VDg~w~~d~~~~~ 93 (512)
|||+|.+|+...+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 6999999997764
No 178
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=39.74 E-value=7.8 Score=26.39 Aligned_cols=13 Identities=46% Similarity=0.869 Sum_probs=10.4
Q ss_pred ECCEEeeCCCCCe
Q 010368 81 VDGEWRHDEHQPF 93 (512)
Q Consensus 81 VDg~w~~d~~~~~ 93 (512)
|||+|.+|+...+
T Consensus 39 vdgeW~YD~ATkT 51 (56)
T 3fil_A 39 VDGEWTYDDATKT 51 (56)
T ss_dssp CCCEEEEEGGGTE
T ss_pred CccEEEecCceeE
Confidence 6999999987653
No 179
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=33.08 E-value=19 Score=31.03 Aligned_cols=35 Identities=37% Similarity=0.676 Sum_probs=29.8
Q ss_pred HHHHHHHHhcCCCcEEEEEeCCCCeEEEEEehHHHHH
Q 010368 472 LHKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFK 508 (512)
Q Consensus 472 L~~a~~~m~~~~~~~l~VVd~~~~~liGiIS~~DIl~ 508 (512)
+.+.++.+...+..-++|.. +++++|+|.+.|.+|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~--d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE--GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE--TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE--CCEEEEEEEEecCCC
Confidence 77788889999988888887 699999999998654
No 180
>4gln_D D-RFX001; heterochiral protein-protein complex, D-protein antagonist, factor-inihibitor complex; HET: DTY DSG DTH DVA DPN DTR DGL DIL DAS; 1.60A {Synthetic} PDB: 4gls_D* 4gls_C*
Probab=31.87 E-value=18 Score=24.70 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=12.5
Q ss_pred EEEEC-CEEeeCCCCCe
Q 010368 78 KFCVD-GEWRHDEHQPF 93 (512)
Q Consensus 78 kf~VD-g~w~~d~~~~~ 93 (512)
..-|| |+|.+|+...+
T Consensus 35 ~n~~d~geWtYddaTKT 51 (56)
T 4gln_D 35 SXFSDFDDWTYDDATKT 51 (56)
T ss_pred hcCCcCCeeEecCccee
Confidence 45678 99999998764
No 181
>2rpv_A Immunoglobulin G-binding protein G; lanthanide binding peptide, LBT, paramagnetic effect, olivia, cell WALL, IGG-binding protein; NMR {Streptococcus SP}
Probab=31.69 E-value=18 Score=26.06 Aligned_cols=13 Identities=46% Similarity=0.869 Sum_probs=10.7
Q ss_pred ECCEEeeCCCCCe
Q 010368 81 VDGEWRHDEHQPF 93 (512)
Q Consensus 81 VDg~w~~d~~~~~ 93 (512)
|||+|.+|+...+
T Consensus 58 vdgeWsYD~ATkT 70 (75)
T 2rpv_A 58 VDGEWTYDDATKT 70 (75)
T ss_dssp CCSEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 6999999987764
No 182
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=30.95 E-value=14 Score=33.70 Aligned_cols=49 Identities=18% Similarity=0.196 Sum_probs=34.7
Q ss_pred cEEEEEEc--cCCCCCC--CCCCccCCCCCeEEEEEEeCCceEEEEEEECCEE
Q 010368 37 RSVFLSGS--FNRWSEL--LPMSPVEGCPTVFQIIWSIPPGYHQYKFCVDGEW 85 (512)
Q Consensus 37 ~~V~l~Gs--f~~W~~~--~~m~~~~~~~~~f~~~~~L~~g~~~ykf~VDg~w 85 (512)
.+|+|+|+ -++|... .+|......++.|.....|..|.++|+|-.+..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 46999998 5689754 3454323457899999999999877776555444
No 183
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=30.54 E-value=72 Score=25.20 Aligned_cols=59 Identities=17% Similarity=0.260 Sum_probs=41.2
Q ss_pred ceeeEEEEecCCC---cEEEEEEccC-CCCCCCCCCccCCCCCeEEEEEE-eCCceEEEEEEE-CCEEeeC
Q 010368 24 VLIPMRFVWPYGG---RSVFLSGSFN-RWSELLPMSPVEGCPTVFQIIWS-IPPGYHQYKFCV-DGEWRHD 88 (512)
Q Consensus 24 ~~~~~~f~w~~~~---~~V~l~Gsf~-~W~~~~~m~~~~~~~~~f~~~~~-L~~g~~~ykf~V-Dg~w~~d 88 (512)
.-.-+.+.+.+|+ ..|.|.|+=+ +|. +|.+ - +..|+..-. ...|-+.||+.. ||+|...
T Consensus 15 ~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~---~M~r-w--Ga~W~~~s~~~l~GplSfRvt~~~G~~~v~ 79 (100)
T 3ft1_A 15 KKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTK-K--GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 79 (100)
T ss_dssp TEEEEEEEEECTTCCEEEEEEECTTCCCCE---ECEE-E--TTEEEEECSSCCCSSEEEEEEETTCCEEEE
T ss_pred ceEEEEEEEcCCCccEEEEEEEeCCCCCeE---Eecc-c--CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 3455666666665 6799999986 685 6766 3 468988752 345788888887 7887665
No 184
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=29.13 E-value=69 Score=24.09 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=21.1
Q ss_pred CcEEEEEeCCCCeEEEEEehHHHHHH
Q 010368 484 VRRLVIVEAGSKRVEGIVSLSDIFKF 509 (512)
Q Consensus 484 ~~~l~VVd~~~~~liGiIS~~DIl~~ 509 (512)
.+.+=+|++ +|..+|++++.+.++.
T Consensus 13 ~~eVrli~~-~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLIDQ-NGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEECT-TSCEEEEEEHHHHHHH
T ss_pred CCEEEEECC-CCcCCCcccHHHHHHH
Confidence 456778996 9999999999998875
No 185
>1pgx_A Protein G; immunoglobulin binding protein; 1.66A {Streptococcus} SCOP: d.15.7.1
Probab=27.06 E-value=20 Score=26.47 Aligned_cols=13 Identities=38% Similarity=0.728 Sum_probs=11.0
Q ss_pred ECCEEeeCCCCCe
Q 010368 81 VDGEWRHDEHQPF 93 (512)
Q Consensus 81 VDg~w~~d~~~~~ 93 (512)
|||+|.+|+...+
T Consensus 52 vdgeWsYD~ATkT 64 (83)
T 1pgx_A 52 VDGVWTYDDATKT 64 (83)
T ss_dssp CCEEEEEETTTTE
T ss_pred CCceEeeccccee
Confidence 6999999998764
No 186
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=23.37 E-value=3.5e+02 Score=23.28 Aligned_cols=61 Identities=15% Similarity=0.358 Sum_probs=40.0
Q ss_pred eEEEEecCCCc------EEEEEEccCCCCCCCCCCccC------------CCCCeEEEEEEeCCceEEEEEEECCEEeeC
Q 010368 27 PMRFVWPYGGR------SVFLSGSFNRWSELLPMSPVE------------GCPTVFQIIWSIPPGYHQYKFCVDGEWRHD 88 (512)
Q Consensus 27 ~~~f~w~~~~~------~V~l~Gsf~~W~~~~~m~~~~------------~~~~~f~~~~~L~~g~~~ykf~VDg~w~~d 88 (512)
+++|+|...+. ++||+ -.+|++..||...+ ..++.++..+.||.++-- +++|=..|..+
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YIT--K~gwdp~~pLtw~dle~~~~~~~~~~~p~~~y~~~v~lP~~rsG-~hVI~~vWq~~ 151 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYIT--KNGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKG-YHVIYAVWGIG 151 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEE--CTTCCTTSCCCGGGEEEEEEEEEEEECCCSEEEEEEEECTTCCE-EEEEEEEEEES
T ss_pred ceEEEEeeecccCCCeEEEEEc--CCCCCCCCCccHHHCeeeeeecCCCcCCCCeEEEEEEeCCCCcc-CEEEEEEEEec
Confidence 47888888763 26666 56898887887432 124578888888865422 12555679887
Q ss_pred CC
Q 010368 89 EH 90 (512)
Q Consensus 89 ~~ 90 (512)
+.
T Consensus 152 Dt 153 (166)
T 4a02_A 152 DT 153 (166)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 187
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=23.12 E-value=35 Score=24.79 Aligned_cols=27 Identities=19% Similarity=0.370 Sum_probs=15.5
Q ss_pred EccCCCCCCCCCCccCCCCCeEEEEEEeCCc
Q 010368 43 GSFNRWSELLPMSPVEGCPTVFQIIWSIPPG 73 (512)
Q Consensus 43 Gsf~~W~~~~~m~~~~~~~~~f~~~~~L~~g 73 (512)
|||.+|+.. .|+ .+++.-+..+.+|.|
T Consensus 1 ~~~s~W~qP-~lk---~~g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQP-ELE---SDEHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCCC-EEE---EETTEEEEEEECCSS
T ss_pred CCcccccCc-eee---cCCCCceEEEeCCCC
Confidence 899999874 332 235667788888877
No 188
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=21.47 E-value=90 Score=33.26 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=36.2
Q ss_pred ceeeEEEE-ecCCCcEEEEEEccCCCCCCCCCCccCCCCC---eEEEEEEeCCceEEEEEEE
Q 010368 24 VLIPMRFV-WPYGGRSVFLSGSFNRWSELLPMSPVEGCPT---VFQIIWSIPPGYHQYKFCV 81 (512)
Q Consensus 24 ~~~~~~f~-w~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~---~f~~~~~L~~g~~~ykf~V 81 (512)
..+-++|. +.+...+|.+.|. ...||.+.. +.+ .|++.++.+.....|+|.|
T Consensus 123 ~~~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~-~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 123 GRVHVLLRTQKGVIKGATFLGE-----KHVPMRKKA-SDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp TEEEEEEEEETTTEEEEEEESS-----SEEECEEEE-ECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred CeEEEEEEcccCCcceEEEeCC-----CEEEEEEEe-cCCCeEEEEEEEECCCCceEEEEEE
Confidence 34556665 3334478888764 447998753 334 4899999888889999988
Done!